Miyakogusa Predicted Gene

Lj3g3v3376380.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3376380.3 Non Chatacterized Hit- tr|I0YVV1|I0YVV1_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,30,2e-18,MatE,Multi antimicrobial extrusion protein; matE: MATE
efflux family protein,Multi antimicrobial ext,CUFF.45926.3
         (585 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G21340.1 | Symbols:  | MATE efflux family protein | chr2:9132...   592   e-169
AT2G21340.2 | Symbols:  | MATE efflux family protein | chr2:9132...   587   e-168
AT4G39030.1 | Symbols: EDS5, SID1 | MATE efflux family protein |...   542   e-154
AT2G38330.1 | Symbols:  | MATE efflux family protein | chr2:1606...    86   6e-17
AT3G08040.2 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family p...    60   6e-09
AT3G08040.1 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family p...    60   6e-09
AT4G38380.1 | Symbols:  | MATE efflux family protein | chr4:1797...    59   1e-08

>AT2G21340.1 | Symbols:  | MATE efflux family protein |
           chr2:9132629-9136236 FORWARD LENGTH=559
          Length = 559

 Score =  592 bits (1525), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 283/453 (62%), Positives = 343/453 (75%), Gaps = 2/453 (0%)

Query: 132 ELAEQNVWVQMKEIVKFTGPVAGIWLCGPLMSLIDTAVVGQGSSVELAALGPATVFCDYL 191
           +LA Q++W QMKEIV FTGP AG+WLCGPLMSLIDTAV+GQGSS+ELAALGPATV CDYL
Sbjct: 106 DLATQSIWGQMKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVICDYL 165

Query: 192 SYTFMFLSVATSNMVATALAKQDREEVQHHISVLLFIGLGCGLVMXXXXXXXXXXXXXXX 251
            YTFMFLSVATSN+VAT+LA+QD++EVQH IS+LLFIGL CG+ M               
Sbjct: 166 CYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGVTMMVLTRLFGSWALTAF 225

Query: 252 XXXKNVHVVPAANTYVQIRGLAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINGIGD 311
              KN  +VPAAN YVQIRGLAWPA+LIGWVAQSASLGMKDSWGPLKALA AS ING+GD
Sbjct: 226 TGVKNADIVPAANKYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGD 285

Query: 312 IVLCTYLGYGIAGAAWATLASQVVAAYMMSQTLNNKGYNAFAFSIPSAKEFFTILSISAP 371
           +VLCT+LGYGIAGAAWAT+ SQVVAAYMM   LN KGY+AF+F +PS  E  TI  ++AP
Sbjct: 286 VVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALNKKGYSAFSFCVPSPSELLTIFGLAAP 345

Query: 372 VFVTLLSKVAFYSLIIYFATSMGTHPMAAHQVMVQIYMACTIFGEPLSQTAQSFMPELMY 431
           VF+T++SKV FY+L++YFATSMGT+ +AAHQVM+QIY   T++GEPLSQTAQSFMPEL++
Sbjct: 346 VFITMMSKVLFYTLLVYFATSMGTNIIAAHQVMLQIYTMSTVWGEPLSQTAQSFMPELLF 405

Query: 432 GVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVPWLFPYIFTSDQMVIQEMHRILIPYF 491
           G+N                            T+VPWLFP IFT D++V  EMH+++IPYF
Sbjct: 406 GINRNLPKARVLLKSLVIIGATLGIVVGTIGTAVPWLFPGIFTRDKVVTSEMHKVIIPYF 465

Query: 492 VALSVTPTIVGLEGTMLAGRDLRFLSLSMIGCFXXX-XXXXXXXXXRYGLQGCWFALAGF 550
           +ALS+TP+   LEGT+LAGRDLR++SLSM GC               +GL+GCW+AL GF
Sbjct: 466 LALSITPSTHSLEGTLLAGRDLRYISLSMTGCLAVAGLLLMLLSNGGFGLRGCWYALVGF 525

Query: 551 QWTRFLSALLRLLSPNGILFSEDLGQYELQKLK 583
           QW RF  +L RLLS +G+L+SED  +Y  +K+K
Sbjct: 526 QWARFSLSLFRLLSRDGVLYSEDTSRYA-EKVK 557


>AT2G21340.2 | Symbols:  | MATE efflux family protein |
           chr2:9132629-9136236 FORWARD LENGTH=556
          Length = 556

 Score =  587 bits (1514), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 283/453 (62%), Positives = 343/453 (75%), Gaps = 5/453 (1%)

Query: 132 ELAEQNVWVQMKEIVKFTGPVAGIWLCGPLMSLIDTAVVGQGSSVELAALGPATVFCDYL 191
           +LA Q++W QMKEIV FTGP AG+WLCGPLMSLIDTAV+GQGSS+ELAALGPATV CDYL
Sbjct: 106 DLATQSIWGQMKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVICDYL 165

Query: 192 SYTFMFLSVATSNMVATALAKQDREEVQHHISVLLFIGLGCGLVMXXXXXXXXXXXXXXX 251
            YTFMFLSVATSN+VAT+LA+QD++EVQH IS+LLFIGL CG+ M               
Sbjct: 166 CYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGVTMMVLTRLFGSWALTGV 225

Query: 252 XXXKNVHVVPAANTYVQIRGLAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINGIGD 311
              KN  +VPAAN YVQIRGLAWPA+LIGWVAQSASLGMKDSWGPLKALA AS ING+GD
Sbjct: 226 ---KNADIVPAANKYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGD 282

Query: 312 IVLCTYLGYGIAGAAWATLASQVVAAYMMSQTLNNKGYNAFAFSIPSAKEFFTILSISAP 371
           +VLCT+LGYGIAGAAWAT+ SQVVAAYMM   LN KGY+AF+F +PS  E  TI  ++AP
Sbjct: 283 VVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALNKKGYSAFSFCVPSPSELLTIFGLAAP 342

Query: 372 VFVTLLSKVAFYSLIIYFATSMGTHPMAAHQVMVQIYMACTIFGEPLSQTAQSFMPELMY 431
           VF+T++SKV FY+L++YFATSMGT+ +AAHQVM+QIY   T++GEPLSQTAQSFMPEL++
Sbjct: 343 VFITMMSKVLFYTLLVYFATSMGTNIIAAHQVMLQIYTMSTVWGEPLSQTAQSFMPELLF 402

Query: 432 GVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVPWLFPYIFTSDQMVIQEMHRILIPYF 491
           G+N                            T+VPWLFP IFT D++V  EMH+++IPYF
Sbjct: 403 GINRNLPKARVLLKSLVIIGATLGIVVGTIGTAVPWLFPGIFTRDKVVTSEMHKVIIPYF 462

Query: 492 VALSVTPTIVGLEGTMLAGRDLRFLSLSMIGCFXXX-XXXXXXXXXRYGLQGCWFALAGF 550
           +ALS+TP+   LEGT+LAGRDLR++SLSM GC               +GL+GCW+AL GF
Sbjct: 463 LALSITPSTHSLEGTLLAGRDLRYISLSMTGCLAVAGLLLMLLSNGGFGLRGCWYALVGF 522

Query: 551 QWTRFLSALLRLLSPNGILFSEDLGQYELQKLK 583
           QW RF  +L RLLS +G+L+SED  +Y  +K+K
Sbjct: 523 QWARFSLSLFRLLSRDGVLYSEDTSRYA-EKVK 554


>AT4G39030.1 | Symbols: EDS5, SID1 | MATE efflux family protein |
           chr4:18185740-18188898 FORWARD LENGTH=543
          Length = 543

 Score =  542 bits (1396), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 266/458 (58%), Positives = 329/458 (71%), Gaps = 9/458 (1%)

Query: 132 ELAEQNVWVQMKEIVKFTGPVAGIWLCGPLMSLIDTAVVGQGSSVELAALGPATVFCDYL 191
           +L +Q++W QMKEIVKFTGP  G+W+CGPLMSLIDT V+GQGSS+ELAALGP TV CD++
Sbjct: 89  DLVKQSIWEQMKEIVKFTGPAMGMWICGPLMSLIDTVVIGQGSSIELAALGPGTVLCDHM 148

Query: 192 SYTFMFLSVATSNMVATALAKQDREEVQHHISVLLFIGLGCGLVMXXXXXXXXXXXXXXX 251
           SY FMFLSVATSNMVAT+LAKQD++E QH ISVLLFIGL CGL+M               
Sbjct: 149 SYVFMFLSVATSNMVATSLAKQDKKEAQHQISVLLFIGLVCGLMMLLLTRLFGPWAVTAF 208

Query: 252 XXXKNVHVVPAANTYVQIRGLAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINGIGD 311
              KN+ +VPAAN Y+QIRGLAWP +L+G VAQSASLGMK+SWGPLKALAAA++ING+GD
Sbjct: 209 TRGKNIEIVPAANKYIQIRGLAWPFILVGLVAQSASLGMKNSWGPLKALAAATIINGLGD 268

Query: 312 IVLCTYLGYGIAGAAWATLASQVVAAYMMSQTLNNKGYNAFAFSIPSAKEFFTILSISAP 371
            +LC +LG GIAGAAWAT ASQ+V+AYMM  +LN +GYNA++F+IPS +E + I +++AP
Sbjct: 269 TILCLFLGQGIAGAAWATTASQIVSAYMMMDSLNKEGYNAYSFAIPSPQELWKISALAAP 328

Query: 372 VFVTLLSKVAFYSLIIYFATSMGTHPMAAHQVMVQIYMACTIFGEPLSQTAQSFMPELMY 431
           VF+++ SK+AFYS IIY ATSMGTH +AAHQVM Q Y  C ++GEPLSQTAQSFMPE++Y
Sbjct: 329 VFISIFSKIAFYSFIIYCATSMGTHVLAAHQVMAQTYRMCNVWGEPLSQTAQSFMPEMLY 388

Query: 432 GVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVPWLFPYIFTSDQMVIQEMHRILIPYF 491
           G N                            T+VP LFP ++T D+++I EMHR+LIP+F
Sbjct: 389 GANRNLPKARTLLKSLMIIGATLGLVLGVIGTAVPGLFPGVYTHDKVIISEMHRLLIPFF 448

Query: 492 VALSVTPTIVGLEGTMLAGRDLR-----FLSLSMIGCFXXXXXXXXXXXXRYGLQGCWFA 546
           +ALS  P  V LEGT+LAGRDL+       S  +IGC              YGL GCWF 
Sbjct: 449 MALSALPMTVSLEGTLLAGRDLKFVSSVMSSSFIIGCLTLMFVTRSG----YGLLGCWFV 504

Query: 547 LAGFQWTRFLSALLRLLSPNGILFSEDLGQYELQKLKT 584
           L GFQW RF   L RLLSP GIL S+    Y ++K+K+
Sbjct: 505 LVGFQWGRFGLYLRRLLSPGGILNSDGPSPYTVEKIKS 542


>AT2G38330.1 | Symbols:  | MATE efflux family protein |
           chr2:16064571-16067318 FORWARD LENGTH=521
          Length = 521

 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 130/278 (46%), Gaps = 14/278 (5%)

Query: 160 PLMSLIDTAVVGQGSSVELAALGPATVFCDYLSYTFM--FLSVATSNMVA--TALAKQDR 215
           P+ SL+DTA VG   S ELAA+G +    + +S  F    L+V TS +       AK D 
Sbjct: 95  PITSLVDTAFVGHIGSAELAAVGVSVSVFNLVSKLFNVPLLNVTTSFVAEEQAIAAKDDN 154

Query: 216 EEVQHHISVL------LFIGLGCGLVMXXXXXXXXXXXXXXXXXXKNVHVVPAANTYVQI 269
           + ++    VL      L +  G G+                     +  +   A  ++++
Sbjct: 155 DSIETSKKVLPSVSTSLVLAAGVGIAEAIALSLGSDFLMDVMAIPFDSPMRIPAEQFLRL 214

Query: 270 RGLAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINGIGDIVLCTYLGYGIAGAAWAT 329
           R    P +++   AQ A  G KD+  PL A+ A +V+N + D +L   LG+GI+GAA AT
Sbjct: 215 RAYGAPPIVVALAAQGAFRGFKDTTTPLYAVVAGNVLNAVLDPILIFVLGFGISGAAAAT 274

Query: 330 LASQVVAAYMMSQTLN-NKGYNAFAFSIPSAKEFFTILSISAPVFVTLLSKVAFYSLIIY 388
           + S+ + A+++   LN N    +    +  A ++     +     V LL     ++L   
Sbjct: 275 VISEYLIAFILLWKLNENVVLLSPQIKVGRANQYLKSGGLLIGRTVALLVP---FTLATS 331

Query: 389 FATSMGTHPMAAHQVMVQIYMACTIFGEPLSQTAQSFM 426
            A   G   MA HQ++++I++A ++  + L+  AQS +
Sbjct: 332 LAAQNGPTQMAGHQIVLEIWLAVSLLTDALAIAAQSLL 369


>AT3G08040.2 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family
           protein | chr3:2566593-2569397 REVERSE LENGTH=526
          Length = 526

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/369 (22%), Positives = 138/369 (37%), Gaps = 31/369 (8%)

Query: 212 KQDREEVQHHISVLLFIGLGCGLVMXXXXXXXXXXXXXXXXXXKNVHVVPAANTYVQIRG 271
           K+++  ++   S  + +GL  GLV                    N  ++  A+ Y+ IR 
Sbjct: 162 KKEKRTIRTA-STAMILGLILGLVQAIFLIFSSKLLLGVMGVKPNSPMLSPAHKYLSIRA 220

Query: 272 LAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINGIGDIVLCTYLGYGIAGAAWATLA 331
           L  PALL+    Q    G KD+  PL A   A VIN + D +    L  GI GAA A + 
Sbjct: 221 LGAPALLLSLAMQGIFRGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAHVI 280

Query: 332 SQ----VVAAYMMSQTLN----NKGYNAFAFSIPSAKEFFTILSISAPVFVTLLSKVAFY 383
           SQ    ++    +++ +N    N G   F   + +      +L ++  + VT    +A  
Sbjct: 281 SQYFMTLILFVFLAKKVNLIPPNFGDLQFGRFLKNG-----LLLLARTIAVTFCQTLA-- 333

Query: 384 SLIIYFATSMGTHPMAAHQVMVQIYMACTIFGEPLSQTAQSFM----PELMYGVNXXXXX 439
                 A  +GT PMAA Q+ +Q+++  ++  + L+   Q+ +     E  Y        
Sbjct: 334 ---AAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILACSFAEKDYNKVTAVAS 390

Query: 440 XXXXXXXXXXXXXXXXXXXXXXXTSVPWLFPYIFTSDQMVIQEMHRILIPYFVALS-VTP 498
                                      +    +F+ D  VI  M  I IP+  A   +  
Sbjct: 391 RVLQMGFVLGLGLSVFVGLGL------YFGAGVFSKDPAVIHLMA-IGIPFIAATQPINS 443

Query: 499 TIVGLEGTMLAGRDLRFLSLSMIGCFXXXXXXXXXXXXRYGLQGCWFALAGFQWTRFLSA 558
               L+G      D  + + SM+G                G  G W AL  +   R ++ 
Sbjct: 444 LAFVLDGVNFGASDFAYTAYSMVGVAAISIAAVIYMAKTNGFIGIWIALTIYMALRAITG 503

Query: 559 LLRLLSPNG 567
           + R+ +  G
Sbjct: 504 IARMATGTG 512


>AT3G08040.1 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family
           protein | chr3:2566593-2569397 REVERSE LENGTH=526
          Length = 526

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/369 (22%), Positives = 138/369 (37%), Gaps = 31/369 (8%)

Query: 212 KQDREEVQHHISVLLFIGLGCGLVMXXXXXXXXXXXXXXXXXXKNVHVVPAANTYVQIRG 271
           K+++  ++   S  + +GL  GLV                    N  ++  A+ Y+ IR 
Sbjct: 162 KKEKRTIRTA-STAMILGLILGLVQAIFLIFSSKLLLGVMGVKPNSPMLSPAHKYLSIRA 220

Query: 272 LAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINGIGDIVLCTYLGYGIAGAAWATLA 331
           L  PALL+    Q    G KD+  PL A   A VIN + D +    L  GI GAA A + 
Sbjct: 221 LGAPALLLSLAMQGIFRGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAHVI 280

Query: 332 SQ----VVAAYMMSQTLN----NKGYNAFAFSIPSAKEFFTILSISAPVFVTLLSKVAFY 383
           SQ    ++    +++ +N    N G   F   + +      +L ++  + VT    +A  
Sbjct: 281 SQYFMTLILFVFLAKKVNLIPPNFGDLQFGRFLKNG-----LLLLARTIAVTFCQTLA-- 333

Query: 384 SLIIYFATSMGTHPMAAHQVMVQIYMACTIFGEPLSQTAQSFM----PELMYGVNXXXXX 439
                 A  +GT PMAA Q+ +Q+++  ++  + L+   Q+ +     E  Y        
Sbjct: 334 ---AAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILACSFAEKDYNKVTAVAS 390

Query: 440 XXXXXXXXXXXXXXXXXXXXXXXTSVPWLFPYIFTSDQMVIQEMHRILIPYFVALS-VTP 498
                                      +    +F+ D  VI  M  I IP+  A   +  
Sbjct: 391 RVLQMGFVLGLGLSVFVGLGL------YFGAGVFSKDPAVIHLMA-IGIPFIAATQPINS 443

Query: 499 TIVGLEGTMLAGRDLRFLSLSMIGCFXXXXXXXXXXXXRYGLQGCWFALAGFQWTRFLSA 558
               L+G      D  + + SM+G                G  G W AL  +   R ++ 
Sbjct: 444 LAFVLDGVNFGASDFAYTAYSMVGVAAISIAAVIYMAKTNGFIGIWIALTIYMALRAITG 503

Query: 559 LLRLLSPNG 567
           + R+ +  G
Sbjct: 504 IARMATGTG 512


>AT4G38380.1 | Symbols:  | MATE efflux family protein |
           chr4:17971855-17974787 REVERSE LENGTH=560
          Length = 560

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 128/313 (40%), Gaps = 40/313 (12%)

Query: 143 KEIVKFTGPVAGIWLCGPLMSLIDTAVVGQGSSVELAALGPATVFCDYLSYTFM--FLSV 200
           +E+V  + P        PL  L++TA +G+  SVEL + G +    + +S  F    LSV
Sbjct: 107 RELVMLSLPAIAGQAIDPLTLLMETAYIGRLGSVELGSAGVSMAIFNTISKLFNIPLLSV 166

Query: 201 ATSNMVATALAK---QD--REEVQHHI--------------SVLLFIGLGCGLVMXXXXX 241
           ATS  VA  +AK   QD   E+ Q  I              S  L + +G G+       
Sbjct: 167 ATS-FVAEDIAKIAAQDLASEDSQSDIPSQGLPERKQLSSVSTALVLAIGIGIFEALALS 225

Query: 242 XXXXXXXXXXXXXKNVHVVPAANTYVQIRGLAWPALLIGWVAQSASLGMKDSWGPLKALA 301
                            +   A  ++ +R L  PA ++    Q    G KD+  P+  L 
Sbjct: 226 LASGPFLRLMGIQSMSEMFIPARQFLVLRALGAPAYVVSLALQGIFRGFKDTKTPVYCL- 284

Query: 302 AASVINGIGDIVLCTYL--------GYGIAGAAWATLASQVVAAYMMSQTLNNKGYNAFA 353
                 GIG+  L  +L          G+AGAA +++ SQ   A +M   L NK      
Sbjct: 285 ------GIGNF-LAVFLFPLFIYKFRMGVAGAAISSVISQYTVAILM-LILLNKRVILLP 336

Query: 354 FSIPSAKEFFTILSISAPVFVTLLSKVAFYSLIIYFATSMGTHPMAAHQVMVQIYMACTI 413
             I S K F   L     V    LS +   ++    A   G   MAAHQ+ +Q+++A ++
Sbjct: 337 PKIGSLK-FGDYLKSGGFVLGRTLSVLVTMTVATSMAARQGVFAMAAHQICMQVWLAVSL 395

Query: 414 FGEPLSQTAQSFM 426
             + L+ + Q+ +
Sbjct: 396 LTDALASSGQALI 408