Miyakogusa Predicted Gene

Lj3g3v3375980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3375980.1 NODE_13213_length_608_cov_448.240143.path2.1
         (185 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G21410.1 | Symbols: VHA-A2 | vacuolar proton ATPase A2 | chr2...   340   4e-94
AT4G39080.1 | Symbols: VHA-A3 | vacuolar proton ATPase A3 | chr4...   337   4e-93
AT2G28520.1 | Symbols: VHA-A1 | vacuolar proton ATPase A1 | chr2...   286   4e-78

>AT2G21410.1 | Symbols: VHA-A2 | vacuolar proton ATPase A2 |
           chr2:9162703-9168141 FORWARD LENGTH=821
          Length = 821

 Score =  340 bits (871), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 154/185 (83%), Positives = 173/185 (93%)

Query: 1   MPPTYFRTNKFTSSYQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLA 60
           MPPT+FRTNKFT+++Q I+D+YGVAKYQEANP+V+T+VTFPFLFAVMFGDWGHGICLLLA
Sbjct: 384 MPPTFFRTNKFTTAFQEIVDAYGVAKYQEANPSVFTIVTFPFLFAVMFGDWGHGICLLLA 443

Query: 61  ALYFIIRERKLSSQKLDDITEMTFGGRYVILLMSLFSIYTGLIYNEFFSVPFELFGPSAY 120
            +Y I+RE+KLSSQKL DI EM FGGRYVI +MSLFSIYTGLIYNEFFS+P+ LF  SAY
Sbjct: 444 TMYLILREKKLSSQKLGDIMEMAFGGRYVIFMMSLFSIYTGLIYNEFFSIPYPLFASSAY 503

Query: 121 ECRDLACSEATTIGLIKARRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGI 180
           +CRD++CSEATTIGLIK R TYPFGVDPVWHGTRSELPFLNSLKMKMSIL+GVAQMNLGI
Sbjct: 504 DCRDVSCSEATTIGLIKTRDTYPFGVDPVWHGTRSELPFLNSLKMKMSILIGVAQMNLGI 563

Query: 181 IMSFF 185
           IMSFF
Sbjct: 564 IMSFF 568


>AT4G39080.1 | Symbols: VHA-A3 | vacuolar proton ATPase A3 |
           chr4:18209513-18214752 FORWARD LENGTH=821
          Length = 821

 Score =  337 bits (863), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 152/184 (82%), Positives = 172/184 (93%)

Query: 2   PPTYFRTNKFTSSYQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAA 61
           PPTYFRTNKFTS+ Q I+D+YGVAKYQEANP V+T+VTFPFLFAVMFGDWGHGIC+LLA 
Sbjct: 384 PPTYFRTNKFTSAIQEIVDAYGVAKYQEANPGVFTIVTFPFLFAVMFGDWGHGICILLAT 443

Query: 62  LYFIIRERKLSSQKLDDITEMTFGGRYVILLMSLFSIYTGLIYNEFFSVPFELFGPSAYE 121
           +Y I++E+KL+SQKL DI EM FGGRYVIL+MSLFSIYTGLIYNEFFS+PF LF PSAY+
Sbjct: 444 MYLILKEKKLASQKLGDIMEMAFGGRYVILMMSLFSIYTGLIYNEFFSIPFPLFAPSAYD 503

Query: 122 CRDLACSEATTIGLIKARRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGII 181
           CRD++CSEATTIGLIK R TYPFG+DPVWHG+RSELPFLNSLKMKMSILLGV+QMNLGII
Sbjct: 504 CRDVSCSEATTIGLIKVRDTYPFGLDPVWHGSRSELPFLNSLKMKMSILLGVSQMNLGII 563

Query: 182 MSFF 185
           MS+F
Sbjct: 564 MSYF 567


>AT2G28520.1 | Symbols: VHA-A1 | vacuolar proton ATPase A1 |
           chr2:12210026-12215532 FORWARD LENGTH=817
          Length = 817

 Score =  286 bits (733), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 141/184 (76%), Positives = 162/184 (88%)

Query: 2   PPTYFRTNKFTSSYQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAA 61
           PPTYFRTNK T+++Q IID+YGVA+YQEANP VY+VVT+PFLFAVMFGDWGHG+CLLL A
Sbjct: 383 PPTYFRTNKLTNAFQEIIDAYGVARYQEANPAVYSVVTYPFLFAVMFGDWGHGLCLLLGA 442

Query: 62  LYFIIRERKLSSQKLDDITEMTFGGRYVILLMSLFSIYTGLIYNEFFSVPFELFGPSAYE 121
           LY + RERKLS+QKL    EM FGGRYVILLM+LFSIY GLIYNEFFSVPF +FG SAY+
Sbjct: 443 LYLLARERKLSTQKLGSFMEMLFGGRYVILLMALFSIYCGLIYNEFFSVPFHIFGGSAYK 502

Query: 122 CRDLACSEATTIGLIKARRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGII 181
           CRD  CS+A T+GLIK R  YPFGVDP W G+R+ELP+LNSLKMKMSILLG+AQMNLG+I
Sbjct: 503 CRDTTCSDAYTVGLIKYRDPYPFGVDPSWRGSRTELPYLNSLKMKMSILLGIAQMNLGLI 562

Query: 182 MSFF 185
           +SFF
Sbjct: 563 LSFF 566