Miyakogusa Predicted Gene
- Lj3g3v3375940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3375940.1 tr|B0BL98|B0BL98_LOTJA CM0216.530.nc protein
OS=Lotus japonicus GN=CM0216.530.nc PE=4
SV=1,100,0,CaM_binding,Calmodulin-binding domain,
plant,gene.Ljchr3_pseudomol_20120830.path1.gene7420.1
(728 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38800.1 | Symbols: | Plant calmodulin-binding protein-relat... 113 5e-25
AT5G04020.1 | Symbols: | calmodulin binding | chr5:1081980-1086... 96 1e-19
AT3G54570.1 | Symbols: | Plant calmodulin-binding protein-relat... 92 1e-18
>AT2G38800.1 | Symbols: | Plant calmodulin-binding protein-related
| chr2:16216999-16218837 FORWARD LENGTH=612
Length = 612
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 91/143 (63%), Gaps = 13/143 (9%)
Query: 590 LLEEDQVRV--SRFHTSCVDSEQQNTGKNWKWAV-RHKRPDQDNEEVRRINPRKPNFLPL 646
L+ E+ +V +R C +Q+ +G W + + K+P + E++R NPR+PN+LP
Sbjct: 479 LMTEENAKVPFNRTRKPC---KQEESGSTISWTIIKCKKPVAETEDLREFNPREPNYLPA 535
Query: 647 NPDPEPEKVDLKHQMIDERKHADEWMLDFALRQAVTKLVPAGKMKVALLVEAFETVMSIP 706
D + EKVDLKHQ IDER+++++WM D+AL++AV+KL PA K KVALLVEAFETV
Sbjct: 536 VMDEDAEKVDLKHQDIDERRNSEDWMFDYALQRAVSKLAPARKRKVALLVEAFETV---- 591
Query: 707 KCEAHIRN-NSPFVHVRPIQACS 728
+ H R + R +QAC+
Sbjct: 592 --QPHGREPEQVLSYGRHLQACN 612
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 85/162 (52%), Gaps = 26/162 (16%)
Query: 57 NYMKPTCSSDA----KKGLLPVSIQNTQSGSD-GKNLPQXXXXXXXXXXXXXXXTLTRSS 111
NYMK T SS+A KK Q Q+GS LT++
Sbjct: 77 NYMKGTSSSEARKENKKKFNLSRNQKNQTGSKHDSRYGVNKERSCNKSSSRNGRGLTKAP 136
Query: 112 TLKPCSGYPIKSTIAVKQEDVNPQEKATCSSTLKDSKFPTYLMLNPGGT--ESEGTSVMK 169
K CS ++ATCSSTLKDSKFP YLMLN G T + GTSV+K
Sbjct: 137 IFKRCS------------------QRATCSSTLKDSKFPEYLMLNHGETFDQVNGTSVLK 178
Query: 170 VCRYTYCSLNSH-HHARLPQLNSFMSARRRLLETQKSVKLEA 210
VC YTYCSLN H H A+ P L SF+S RR+ L++QKSVK+EA
Sbjct: 179 VCPYTYCSLNGHLHAAQYPPLKSFISLRRQSLKSQKSVKMEA 220
>AT5G04020.1 | Symbols: | calmodulin binding | chr5:1081980-1086546
REVERSE LENGTH=1495
Length = 1495
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 13/117 (11%)
Query: 586 QDQELLEEDQVRVSRFHTSCVDSEQQNTGKNWKWAVRHKRPDQDNEEVRRINPRKPNFLP 645
Q E L+ +VR+ R+ N K A+ +R + E VR+ NPR+P FLP
Sbjct: 1387 QKSETLQVSKVRIDRWS-------------NLKRAILLRRFVKALENVRKFNPREPRFLP 1433
Query: 646 LNPDPEPEKVDLKHQMIDERKHADEWMLDFALRQAVTKLVPAGKMKVALLVEAFETV 702
NP+ E EKV+L+HQ +K+ DEWM+D AL+ V+KL PA K+KV LLV+AFE++
Sbjct: 1434 PNPEVEAEKVNLRHQETQNKKNGDEWMVDNALQGVVSKLTPARKLKVQLLVQAFESL 1490
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 7/108 (6%)
Query: 616 NWKWAVRHKRPDQDNEEVRRINPRKPNFLPLNPDPEPEKVDLKHQMIDERKHADEWMLDF 675
N K + KR D + R++P+ P LP PDPE EK+ L+HQ I +++++EWMLD+
Sbjct: 1150 NVKKVILLKRFVSDLGSLTRLSPKTPRVLPWEPDPETEKIRLRHQEIGGKRNSEEWMLDY 1209
Query: 676 ALRQAVTKLVPAGKMKVALLVEAFETVM-------SIPKCEAHIRNNS 716
ALRQA++ L P+ K KV+LL +AF+T+ S P A RN S
Sbjct: 1210 ALRQAISTLAPSQKRKVSLLAQAFDTISLQDMGSGSTPGSAASSRNIS 1257
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 610 QQNTGKNW---KWAVRHKRPDQDNEEVRRINPRKPNFLPLNPDPEPEKVDLKHQMIDE-- 664
Q T ++W + + KR + E+V+ NPRK LP+ E E V L+H+ I E
Sbjct: 847 QGETKRSWNSLRKVILLKRFVKSLEKVQVPNPRKMRNLPVESAFEAENVFLRHRSIMEGT 906
Query: 665 RKHADEWMLDFALRQAVTKLVPAGKMKVALLVEAFETVM 703
R +E MLD+ALRQA+++L P + KV LLV+AF+ V+
Sbjct: 907 RTEGEEMMLDYALRQAISRLAPIQRKKVDLLVQAFDIVL 945
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 657 LKHQMIDERKHADEWMLDFALRQAVTKLVPAGKMKVALLVEAFETVM 703
L+ +++ ERK+A+EWMLD ALRQ ++ L P+ K KV LV+AFE+++
Sbjct: 552 LRRELVGERKNAEEWMLDHALRQVISTLAPSQKKKVKHLVKAFESLI 598
>AT3G54570.1 | Symbols: | Plant calmodulin-binding protein-related
| chr3:20197949-20199202 REVERSE LENGTH=417
Length = 417
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 631 EEVRRINPRKPNFLPLNPDPEPEKVDLKHQMIDERKHADEWMLDFALRQAVTKLVPAGKM 690
E+ RR+NPR+PN++ +P E VDL+HQ +DERK A+EWM+D+AL+ V+KLV K
Sbjct: 343 EDCRRLNPREPNYIQTTVEPSNETVDLRHQDMDERKKAEEWMIDYALQHTVSKLVVERKK 402
Query: 691 KVALLVEAFETVMSIPK 707
VALLVEAFET ++PK
Sbjct: 403 DVALLVEAFET--TVPK 417
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 57 NYMKPTCSSDAKKGLLPVSIQNTQSGSDGKNLPQXXXXXXXXXXXXXXXTLTRSSTLKPC 116
NYMK T SS+A++ Q+ Q+G D K+ + S +LK
Sbjct: 53 NYMKGTRSSEARR-----QSQSVQAGLDKKS-----QTGKKLDSCSREKKQSSSRSLKKG 102
Query: 117 SGYPIKSTIAVKQEDVNPQEKATCSSTLKDSKFPTYLMLNPGGTESEGTSVMKVCRYTYC 176
+ I + D N +ATCSS LK+SKF LM ++KVC YTYC
Sbjct: 103 QSFKRSGRIG-RCWDANVH-RATCSSLLKNSKFTEDLMFT-------SPHILKVCPYTYC 153
Query: 177 SLNSHHHARLPQLNSFMSARRRLLETQKS 205
SLN+H H++ P L SF+S RRR L++ S
Sbjct: 154 SLNAHLHSQFPPLLSFISERRRSLKSHAS 182