Miyakogusa Predicted Gene

Lj3g3v3375790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3375790.1 Non Chatacterized Hit- tr|I3SMY5|I3SMY5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.73,0,seg,NULL;
NAC_AB,Nascent polypeptide-associated complex NAC; NAC,Nascent
polypeptide-associated comp,CUFF.45757.1
         (157 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17880.1 | Symbols: BTF3, ATBTF3 | basic transcription factor...   219   6e-58
AT1G73230.1 | Symbols:  | Nascent polypeptide-associated complex...   210   4e-55

>AT1G17880.1 | Symbols: BTF3, ATBTF3 | basic transcription factor 3
           | chr1:6152572-6153425 REVERSE LENGTH=165
          Length = 165

 Score =  219 bits (558), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 111/145 (76%), Positives = 118/145 (81%), Gaps = 1/145 (0%)

Query: 1   MKMAGSXXXXXXXXXXXXXXAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVI 60
           MKMA +              AVHKT TTDDKRLQSTLKRIGVN+IPAIEEVNIFKDDVVI
Sbjct: 7   MKMANTVRTGGKGTVRRKKKAVHKTNTTDDKRLQSTLKRIGVNSIPAIEEVNIFKDDVVI 66

Query: 61  QFLNPKVQASIAANTWVVSGAPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEA 120
           QF+NPKVQASIAANTWVVSG+PQTKKLQDILP II QLGPDN++NLKKLAEQFQKQA   
Sbjct: 67  QFINPKVQASIAANTWVVSGSPQTKKLQDILPQIISQLGPDNMDNLKKLAEQFQKQASGE 126

Query: 121 GAADSTAAQEENDDDVPELVPGETF 145
           G A S   QEE+DDDVPELV GETF
Sbjct: 127 GNAASATIQEEDDDDVPELV-GETF 150


>AT1G73230.1 | Symbols:  | Nascent polypeptide-associated complex
           NAC | chr1:27540506-27541364 REVERSE LENGTH=165
          Length = 165

 Score =  210 bits (534), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 115/152 (75%), Positives = 125/152 (82%)

Query: 1   MKMAGSXXXXXXXXXXXXXXAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVI 60
           MKMA +              AVHKTTTTDDKRLQSTLKR+GVN+IPAIEEVNIFKDDVVI
Sbjct: 7   MKMANTVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRVGVNSIPAIEEVNIFKDDVVI 66

Query: 61  QFLNPKVQASIAANTWVVSGAPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEA 120
           QF+NPKVQASIAANTWVVSG PQTKKLQDILP II QLGPDNL+NLKKLAEQFQKQAP A
Sbjct: 67  QFINPKVQASIAANTWVVSGTPQTKKLQDILPQIISQLGPDNLDNLKKLAEQFQKQAPGA 126

Query: 121 GAADSTAAQEENDDDVPELVPGETFETVAEEE 152
           G   +T  +E++DDDVP+LV GETFET A EE
Sbjct: 127 GDVPATIQEEDDDDDVPDLVVGETFETPATEE 158