Miyakogusa Predicted Gene

Lj3g3v3363550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3363550.1 Non Chatacterized Hit- tr|I1JSM1|I1JSM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20983
PE,49.58,6e-18,DUF4408,Domain of unknown function DUF4408,CUFF.45711.1
         (322 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66440.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    75   7e-14
AT4G34560.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    68   7e-12

>AT5G66440.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:26530274-26531032
           REVERSE LENGTH=252
          Length = 252

 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 9/136 (6%)

Query: 1   MDSFSFNNLQAGRANAILKHDKLRRITSLLRIIEVCVLVVLVSRFSMKLPGSVRNTSEYL 60
           MDSF F+N++A +A A+ + ++  RI    R  EVCV ++ +     +LP  V+ +  +L
Sbjct: 1   MDSFDFDNVKAEKAKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAFL 60

Query: 61  REFSLFMNSPRFVFLIGNAIIITLFAQYGQFSAQGSAENVVQTEPDLYQEFLQKSTTKYR 120
           R  +  +++P FVFL+GN+I++ L  +    S+  +   V   E ++YQ F++       
Sbjct: 61  RRIAAVISTPLFVFLLGNSIVVVLLTK----SSDQTTTAVASAETEIYQAFVRSV----- 111

Query: 121 EKQSIRTEEDIENRII 136
           E +S  ++ED+   I+
Sbjct: 112 ENRSKPSDEDLTEGIV 127


>AT4G34560.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in
           11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
           - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr4:16507923-16508588 FORWARD
           LENGTH=221
          Length = 221

 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 78/131 (59%), Gaps = 5/131 (3%)

Query: 1   MDSFSFNNLQAGRANAILKHDKLRRITSLLRIIEVCVLVVLVSRFSMKLPGSVRNTSEYL 60
           MD   F +L+  ++  IL    +R  TSL R+ E+ +LV+L+S+ S     SV+ + +  
Sbjct: 1   MDPIKFQHLKMEKSRGILNFQAIRSFTSLFRLFELLLLVILISKLSFP---SVKISGDIF 57

Query: 61  REFSLFMNSPRFVFLIGNAIIITLFAQYGQFSA--QGSAENVVQTEPDLYQEFLQKSTTK 118
           +E ++F+ SPRFVF IGNAI+ITL A+ G++S+  + S         DLYQEFL KS  K
Sbjct: 58  KEAAVFLVSPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKSEKK 117

Query: 119 YREKQSIRTEE 129
                + +TE+
Sbjct: 118 KPVVYATKTEQ 128