Miyakogusa Predicted Gene

Lj3g3v3363320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3363320.1 Non Chatacterized Hit- tr|E1ZGN3|E1ZGN3_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,24.81,3e-16,seg,NULL; P-loop containing nucleoside
triphosphate hydrolases,NULL;
Adaptin_binding,Alpha/gamma-ada,CUFF.45697.1
         (395 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65960.1 | Symbols:  | GTP binding | chr5:26385413-26387197 F...   400   e-111

>AT5G65960.1 | Symbols:  | GTP binding | chr5:26385413-26387197
           FORWARD LENGTH=393
          Length = 393

 Score =  400 bits (1027), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/388 (55%), Positives = 267/388 (68%), Gaps = 9/388 (2%)

Query: 13  LESRPGIFVIGSSNVGKRTLLSRLLSVDCEDAFDSDSQVNVHGWTINNKYYSADVSVWMA 72
           +ESRPG+ V+GSS VGKRTLLSRLLSV+ ED+ +S SQ  VHGWTIN KYY+ADVSV ++
Sbjct: 1   MESRPGVLVVGSSGVGKRTLLSRLLSVEFEDSSESSSQTEVHGWTINTKYYTADVSVCIS 60

Query: 73  HLHEDFSVRDLPVFQRMTALVMVFDMNDLSSLTALQGWVSHTDIQNFEILLCIGNKVDLV 132
           H+ +++S+ +LP    + ALVMVFD+++LS+L ALQ WVSHTDI +F+ILLCIGNKVD V
Sbjct: 61  HICDEYSLPNLPNSHPLVALVMVFDLSELSTLVALQDWVSHTDINSFDILLCIGNKVDRV 120

Query: 133 PGHPAHAEYRRRLLKLEDSSANLDLEFSEYGISESEGTSLLGDEEPSWDIRKSCLEWCTE 192
           P H AH EYRRRLLK  D S +L  +  ++GISE+EG+SLLG E+ S DIR +CLEWC+E
Sbjct: 121 PHHLAHDEYRRRLLKASDPSRDLYSDIDDFGISETEGSSLLGSEDASLDIRGACLEWCSE 180

Query: 193 NNIEFVEACASNADFDKCLSVDGDLQGVERLYGALSAHMWPGMILKSGDRISQPSFPXXX 252
           NNIEF+EACASN DFDKCLSVDGD QGVERL+GALSAHMWPGMILKSGDRI++P  P   
Sbjct: 181 NNIEFIEACASNPDFDKCLSVDGDSQGVERLFGALSAHMWPGMILKSGDRINEPVLPQGE 240

Query: 253 XXXXXXXXXXXXXXVLSAGSADPWHDTEQEWVCATSS----DAGGSAPQDNSNTGREHVD 308
                         VLSAGS DPW + E+ WV A+ +    DAGGS  Q+N +     V 
Sbjct: 241 ELSEEESEYELEYEVLSAGSGDPWDNIEERWVSASETHSHADAGGSTSQENLHVENSMVK 300

Query: 309 ESKSKKELHTTTSCTD-QDENDKEVVHNIVDSEGDVKXXXXXXXXXXXXXQLMSEIGNMR 367
            +K  +EL  + S  + Q++ D+     IV  E  +              QLMSEIGN+R
Sbjct: 301 PNKVDEELLPSGSRLELQNDTDRA----IVTDEKPLGTENEKCYEFEDVEQLMSEIGNIR 356

Query: 368 DGLRLMPDFQRREXXXXXXXXXXXXFGG 395
           D LRLMPDFQRRE            FGG
Sbjct: 357 DNLRLMPDFQRREIAANLAMKMASMFGG 384