Miyakogusa Predicted Gene

Lj3g3v3360930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3360930.1 tr|Q05JY1|Q05JY1_LOTJA Pterocarpan reductase
OS=Lotus japonicus GN=PTR3 PE=2 SV=1,98.71,0,NAD(P)-binding
Rossmann-fold domains,NULL; PREDICTED PROTEIN,NULL; NAD DEPENDENT
EPIMERASE/DEHYDRATA,CUFF.45680.1
         (309 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G39230.1 | Symbols:  | NmrA-like negative transcriptional reg...   462   e-131
AT1G75280.1 | Symbols:  | NmrA-like negative transcriptional reg...   411   e-115
AT1G75290.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   410   e-115
AT1G75300.1 | Symbols:  | NmrA-like negative transcriptional reg...   376   e-104
AT1G19540.1 | Symbols:  | NmrA-like negative transcriptional reg...   335   2e-92
AT4G34540.1 | Symbols:  | NmrA-like negative transcriptional reg...   284   5e-77
AT1G32100.1 | Symbols: ATPRR1, PRR1 | pinoresinol reductase 1 | ...   257   9e-69
AT4G13660.1 | Symbols: ATPRR2, PRR2 | pinoresinol reductase 2 | ...   254   5e-68

>AT4G39230.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr4:18266024-18267604
           REVERSE LENGTH=308
          Length = 308

 Score =  462 bits (1190), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 217/306 (70%), Positives = 256/306 (83%)

Query: 4   ADTKILSIGGTGFIGKFIVEASLKAGHPTYLLIRESSLSDPARSPIIQKFKTMGANIVFG 63
           + +KIL IGGTG+IGK+IVEAS ++GHPT +L+R S+L+ P+RS  I+ FK +G   + G
Sbjct: 3   SKSKILFIGGTGYIGKYIVEASARSGHPTLVLVRNSTLTSPSRSSTIENFKNLGVQFLLG 62

Query: 64  DLYDHKSLVDAIKKVDVVISTVGHVLLAEQYRIIAAIKEAGNVKRFFPSEFGNDVDRTHA 123
           DL DH SLV++IK+ DVVISTVGH LL  QY+II+AIKEAGNVKRFFPSEFGNDVDR   
Sbjct: 63  DLDDHTSLVNSIKQADVVISTVGHSLLGHQYKIISAIKEAGNVKRFFPSEFGNDVDRVFT 122

Query: 124 VDPSKSTYQLKVNVRRAIEAEGIPHTIVSCNFFASYFLSTLSQPGVTTPPRDKVVILGDG 183
           V+P+KS Y  K  +RR IEAEGIP+T VSCNFFA YFL TL+QPG T+ PRDKV++LGDG
Sbjct: 123 VEPAKSAYATKAKIRRTIEAEGIPYTYVSCNFFAGYFLPTLAQPGATSAPRDKVIVLGDG 182

Query: 184 NPKCVFNKEDDIGTYTIRAVSDPRTLNKILYIRPPANTLSFNDLVSLWEKKIGKTLERVY 243
           NPK VFNKE+DIGTYTI AV DPRTLNKILYIRPP NT SFNDLVSLWE KIGKTLER+Y
Sbjct: 183 NPKAVFNKEEDIGTYTINAVDDPRTLNKILYIRPPMNTYSFNDLVSLWENKIGKTLERIY 242

Query: 244 VPEDQVLKQIKESPVPNSVMLAISHAVYVKGDQTNFEIEQSFGVEASSLYPDVKYTTVDE 303
           VPE+Q+LKQI ES  P +VML++ H V+VKG  T+FEIE SFGVEAS LYPDVKYTTVDE
Sbjct: 243 VPEEQLLKQIIESSPPLNVMLSLCHCVFVKGGHTSFEIEPSFGVEASELYPDVKYTTVDE 302

Query: 304 LLDQFV 309
           +L+Q+V
Sbjct: 303 ILNQYV 308


>AT1G75280.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr1:28252030-28253355
           FORWARD LENGTH=310
          Length = 310

 Score =  411 bits (1056), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/310 (64%), Positives = 246/310 (79%), Gaps = 3/310 (0%)

Query: 1   MAAADTKILSIGGTGFIGKFIVEASLKAGHPTYLLIRESSLSDPARSPIIQKFKTMGANI 60
           MA   +KIL IGGTG+IGKF+VEAS KAGH T+ L+RE++LSDP +   +Q FK +G  I
Sbjct: 1   MATEKSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTI 60

Query: 61  VFGDLYDHKSLVDAIKKVDVVISTVGHVLLAEQYRIIAAIKEAGNVKRFFPSEFGNDVDR 120
           + GDL DH+SLV AIK+VDVVISTVG + + +Q +II+AIKEAGNVKRF PSEFG DVDR
Sbjct: 61  LHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDR 120

Query: 121 THAVDPSKSTYQLKVNVRRAIEAEGIPHTIVSCNFFASYFLSTLSQ--PGVTTPPRDKVV 178
           T AV+P+KS +  K+ +RR IEAEGIP+T      F  Y+L TL Q  PG+T+PPRDKV 
Sbjct: 121 TSAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVT 180

Query: 179 ILGDGNPKCVFNKEDDIGTYTIRAVSDPRTLNKILYIRPPANTLSFNDLVSLWEKKIGKT 238
           ILGDGN K V NKE+DI  YTI+AV DPRTLNKILYI+P  NTLS N++V+LWEKKIGK+
Sbjct: 181 ILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKS 240

Query: 239 LERVYVPEDQVLKQIKESPVPNSVMLAISHAVYVKGDQTNFEIEQSFGVEASSLYPDVKY 298
           LE+ ++PE+Q+LK I+ESP+P +V+L+I+HAV+V GD TN  IE SFGVEAS LYPDVKY
Sbjct: 241 LEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNGD-TNISIEPSFGVEASELYPDVKY 299

Query: 299 TTVDELLDQF 308
           T+VDE L  F
Sbjct: 300 TSVDEYLSYF 309


>AT1G75290.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr1:28253890-28255173 FORWARD LENGTH=318
          Length = 318

 Score =  410 bits (1054), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 195/310 (62%), Positives = 245/310 (79%), Gaps = 2/310 (0%)

Query: 1   MAAADTKILSIGGTGFIGKFIVEASLKAGHPTYLLIRESSLSDPARSPIIQKFKTMGANI 60
           MA+  +KIL IGGTG IGK I+EAS+KAGH T  L+RE+SLSDP +   +Q FK  G  +
Sbjct: 1   MASEKSKILVIGGTGHIGKLIIEASVKAGHSTLALVREASLSDPNKGKTVQNFKDFGVTL 60

Query: 61  VFGDLYDHKSLVDAIKKVDVVISTVGHVLLAEQYRIIAAIKEAGNVKRFFPSEFGNDVDR 120
           + GDL DH+SLV AIK+ DVVISTVG + + +Q +II+AIKEAGNVKRF PSEFG DVD+
Sbjct: 61  LHGDLNDHESLVKAIKQADVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGMDVDK 120

Query: 121 THAVDPSKSTYQLKVNVRRAIEAEGIPHTIVSCNFFASYFLSTLSQ--PGVTTPPRDKVV 178
           + AV+P+KS +  K+  RR IEAEGIP+T +  N+FA Y+L TL Q  PG+T+PPRDKV 
Sbjct: 121 SSAVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAGYYLPTLVQLEPGLTSPPRDKVK 180

Query: 179 ILGDGNPKCVFNKEDDIGTYTIRAVSDPRTLNKILYIRPPANTLSFNDLVSLWEKKIGKT 238
           I GDGN K V NKE+DI  YTI+AV DPRTLNK LYI PP NTLS N++V+LWEKKIGK+
Sbjct: 181 IFGDGNVKAVINKEEDIAAYTIKAVDDPRTLNKTLYINPPNNTLSMNEIVTLWEKKIGKS 240

Query: 239 LERVYVPEDQVLKQIKESPVPNSVMLAISHAVYVKGDQTNFEIEQSFGVEASSLYPDVKY 298
           +E++Y+ E+Q+ K I+ESPVP +V+L+I+HAV+VKGDQTNF IE SFG EAS LYPD+KY
Sbjct: 241 VEKIYMSEEQIFKSIQESPVPFNVLLSINHAVFVKGDQTNFTIEPSFGFEASELYPDIKY 300

Query: 299 TTVDELLDQF 308
           T++DE L  F
Sbjct: 301 TSIDEYLSYF 310


>AT1G75300.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr1:28255552-28256927
           FORWARD LENGTH=322
          Length = 322

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/324 (58%), Positives = 238/324 (73%), Gaps = 19/324 (5%)

Query: 1   MAAADTKILSIGGTGFIGKFIVEASLKAGHPTYLLIRESSLSDPARSPIIQKFKTMGANI 60
           M    +KIL IGGTG++G+FIVE S KAG+PT+ L+RE+SLSDP +S  IQ FK +G  I
Sbjct: 1   MTTEKSKILVIGGTGYMGEFIVEGSAKAGNPTFALVREASLSDPVKSKTIQSFKDLGVTI 60

Query: 61  VFGDLYDHKSLVDAIKKVDVVISTVGHVLLAEQYRIIAAIKEAGNVKRFFPSEFGNDVDR 120
           + GDL DH+SLV AIK+VDVVIST+GH  + +Q +II+AIKEAGNVKRF P+EFG DV+R
Sbjct: 61  LHGDLNDHESLVKAIKQVDVVISTIGHKQIFDQTKIISAIKEAGNVKRFLPAEFGIDVER 120

Query: 121 THAVDPSKSTYQLKVNVRRAIEAEGIPHTIVSCNFFASYFLSTLSQ--PGVTT------- 171
           T AV+P+KS +  KV +RRAIEAEGIP+T V  N  A ++L TL Q   G+ +       
Sbjct: 121 TSAVEPAKSLFAGKVQIRRAIEAEGIPYTYVVSNCSAGFYLRTLLQFESGLISHTRDKAI 180

Query: 172 -------PPRDKVVILGDGNPKCVFNKEDDIGTYTIRAVSDPRTLNKILYIRPPANTLSF 224
                  PPRDKV ILGDGN K V NKE+D+  Y I+AV D RTLNK LYI PP N LS 
Sbjct: 181 IFGDKNVPPRDKVTILGDGNAKVVINKEEDVAAYMIKAVDDLRTLNKTLYISPPNNILSM 240

Query: 225 NDLVSLWEKKIGKTLERVYVPEDQVLKQIKESPVPNSVMLAISHAVYVKGDQTNFEIEQS 284
           N++V+LWEKKIGK+LE+ ++ E+Q+LK I+   VP  V  +I+HAV+VKGDQT+F IE  
Sbjct: 241 NEMVTLWEKKIGKSLEKTHISEEQILKSIQ---VPIDVFKSINHAVFVKGDQTSFTIEPW 297

Query: 285 FGVEASSLYPDVKYTTVDELLDQF 308
           FG EAS LYPDVKYT++DE L QF
Sbjct: 298 FGEEASVLYPDVKYTSIDEYLSQF 321


>AT1G19540.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr1:6765713-6767247 FORWARD
           LENGTH=310
          Length = 310

 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 169/308 (54%), Positives = 220/308 (71%), Gaps = 4/308 (1%)

Query: 6   TKILSIGGTGFIGKFIVEASLKAGHPTYLLIRESSLSDPARSPIIQKFKTMGANIVFGDL 65
           +KIL IG TG IGK +VE S K+GH T+ L+RE+SLSDP ++ ++++FK +G  I++G L
Sbjct: 3   SKILVIGATGLIGKVLVEESAKSGHATFALVREASLSDPVKAQLVERFKDLGVTILYGSL 62

Query: 66  YDHKSLVDAIKKVDVVISTVG--HVLLAEQYRIIAAIKEAGNVKRFFPSEFGNDVDRTHA 123
            D +SLV AIK+VDVVIS VG     +  Q  II AIKE+GNVKRF PSEFGNDVDRT A
Sbjct: 63  SDKESLVKAIKQVDVVISAVGRFQTEILNQTNIIDAIKESGNVKRFLPSEFGNDVDRTVA 122

Query: 124 VDPSKSTYQLKVNVRRAIEAEGIPHTIVSCNFFASYFLSTLSQPGVT--TPPRDKVVILG 181
           ++P+ S +  K  +RRAIEA  IP+T V    FA  F+  L Q  +   +PPRDKV I  
Sbjct: 123 IEPTLSEFITKAQIRRAIEAAKIPYTYVVSGCFAGLFVPCLGQCHLRLRSPPRDKVSIYD 182

Query: 182 DGNPKCVFNKEDDIGTYTIRAVSDPRTLNKILYIRPPANTLSFNDLVSLWEKKIGKTLER 241
            GN K + N E+DI  YT++AV DPRTLNKILYI PP   +S ND+V LWE+KIGKTLE+
Sbjct: 183 TGNGKAIVNTEEDIVAYTLKAVDDPRTLNKILYIHPPNYIVSQNDMVGLWEEKIGKTLEK 242

Query: 242 VYVPEDQVLKQIKESPVPNSVMLAISHAVYVKGDQTNFEIEQSFGVEASSLYPDVKYTTV 301
            YV E+++LK I+ES  P   ++ + H + VK D T+F I+ SFGVEAS LYP+VKYT+V
Sbjct: 243 TYVSEEELLKTIQESKPPMDFLVGLIHTILVKSDFTSFTIDPSFGVEASELYPEVKYTSV 302

Query: 302 DELLDQFV 309
           DE L++F+
Sbjct: 303 DEFLNRFI 310


>AT4G34540.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr4:16500506-16501932
           FORWARD LENGTH=306
          Length = 306

 Score =  284 bits (727), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 134/304 (44%), Positives = 194/304 (63%), Gaps = 5/304 (1%)

Query: 6   TKILSIGGTGFIGKFIVEASLKAGHPTYLLIRESSLSDPARSPIIQKFKTMGANIVFGDL 65
           +++L IG TG +G ++   S+++GHPT+ LIR ++LSD  +S         G  ++ G L
Sbjct: 8   SRVLIIGATGRLGNYLTRFSIESGHPTFALIRNTTLSDKLKS-----LSDAGVTLLKGSL 62

Query: 66  YDHKSLVDAIKKVDVVISTVGHVLLAEQYRIIAAIKEAGNVKRFFPSEFGNDVDRTHAVD 125
            D  SL +A+ KVDVVIS +    + +Q  ++  IK+AG++KRF P+E+G + D+T   D
Sbjct: 63  EDEGSLAEAVSKVDVVISAIPSKHVLDQKLLVRVIKQAGSIKRFIPAEYGANPDKTQVSD 122

Query: 126 PSKSTYQLKVNVRRAIEAEGIPHTIVSCNFFASYFLSTLSQPGVTTPPRDKVVILGDGNP 185
                Y  K  +R  IE+EGIP+T + C  F    L +L QPG+ +PP DKV + GDGN 
Sbjct: 123 LDHDFYSKKSEIRHMIESEGIPYTYICCGLFMRVLLPSLVQPGLQSPPTDKVTVFGDGNV 182

Query: 186 KCVFNKEDDIGTYTIRAVSDPRTLNKILYIRPPANTLSFNDLVSLWEKKIGKTLERVYVP 245
           K VF  + D+  +TI+ + DPRTLNK LY+ PP N  S NDLV LWE KI K LE+ +  
Sbjct: 183 KAVFVNDVDVAAFTIKTIDDPRTLNKTLYLSPPGNICSMNDLVELWEGKIEKKLEKTFAT 242

Query: 246 EDQVLKQIKESPVPNSVMLAISHAVYVKGDQTNFEIEQSFGVEASSLYPDVKYTTVDELL 305
           E+Q+LK+IKE+P P+++ +   ++V++KGD T F+IE   GV  + LYPDVKY TV E L
Sbjct: 243 ENQLLKKIKETPYPDNMEMVFIYSVFIKGDHTYFDIESCGGVNGTELYPDVKYMTVSEFL 302

Query: 306 DQFV 309
           D  +
Sbjct: 303 DTLL 306


>AT1G32100.1 | Symbols: ATPRR1, PRR1 | pinoresinol reductase 1 |
           chr1:11546472-11547953 REVERSE LENGTH=317
          Length = 317

 Score =  257 bits (656), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 191/311 (61%), Gaps = 10/311 (3%)

Query: 6   TKILSIGGTGFIGKFIVEASLKAGHPTYLLIRESSLSDPARSPIIQKFKTMGANIVFGDL 65
           T++L +G TG+IGK IV A L  GH TY+L R     +  +  +   FK +GA IV G  
Sbjct: 10  TRVLVVGATGYIGKRIVRACLAEGHETYVLQRPEIGLEIEKVQLFLSFKKLGARIVEGSF 69

Query: 66  YDHKSLVDAIKKVDVVISTVG------HVLLAEQYRIIAAIKEAGNVKRFFPSEFGNDVD 119
            DH+SLV A+K VDVV+S +       H +L  Q +++ AIKEAGNVKRF PSEFG D  
Sbjct: 70  SDHQSLVSAVKLVDVVVSAMSGVHFRSHNILV-QLKLVEAIKEAGNVKRFLPSEFGMDPP 128

Query: 120 RT-HAVDPSKSTYQLKVNVRRAIEAEGIPHTIVSCNFFASYFLSTLSQPGVTTPPRDKVV 178
           R  HA+ P + T+  K+ VR+AIEA GIP+T V    FA+YF   LSQ     PP++KV 
Sbjct: 129 RMGHALPPGRETFDQKMEVRQAIEAAGIPYTYVVGACFAAYFAGNLSQMVTLLPPKEKVN 188

Query: 179 ILGDGNPKCVFNKEDDIGTYTIRAVSDPRTLNKILYIRPPANTLSFNDLVSLWEKKIGKT 238
           I GDGN K VF  EDDI  YT + ++DPRTLNK + IRPP N L+  +LV +WEK  GK 
Sbjct: 189 IYGDGNVKVVFADEDDIAKYTAKTLNDPRTLNKTVNIRPPDNVLTQLELVQIWEKLTGKE 248

Query: 239 LERVYVPEDQVLKQIKESPVPNSVMLAISHAVYVKGDQTNFEIEQSFGVEASSLYPDVKY 298
           LE+  +     L  I++  +P+   +   + ++ +G  T+ E+ +    EASSLYPDVKY
Sbjct: 249 LEKTNIAAQDFLANIEQMEIPHQAGIGHFYHIFYEGCLTDHEVGED--EEASSLYPDVKY 306

Query: 299 TTVDELLDQFV 309
             +D+ L  F+
Sbjct: 307 KRMDDYLRMFL 317


>AT4G13660.1 | Symbols: ATPRR2, PRR2 | pinoresinol reductase 2 |
           chr4:7946283-7948252 FORWARD LENGTH=317
          Length = 317

 Score =  254 bits (649), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 138/310 (44%), Positives = 189/310 (60%), Gaps = 8/310 (2%)

Query: 6   TKILSIGGTGFIGKFIVEASLKAGHPTYLLIRESSLSDPARSPIIQKFKTMGANIVFGDL 65
           T++L +GGTG +G+ IV A L  GH TY+L R     D  +  ++  FK +GA++V G  
Sbjct: 10  TRVLVVGGTGSLGRRIVSACLAEGHETYVLQRPEIGVDIEKVQLLLSFKRLGAHLVEGSF 69

Query: 66  YDHKSLVDAIKKVDVVISTVGHVLLAE-----QYRIIAAIKEAGNVKRFFPSEFGNDVDR 120
            DH+SLV A+K+VDVV+S +  V         Q +++AAIKEAGNVKRF PSEFG D  R
Sbjct: 70  SDHQSLVSAVKQVDVVVSAMSGVHFRTHNIPVQLKLVAAIKEAGNVKRFLPSEFGMDPSR 129

Query: 121 T-HAVDPSKSTYQLKVNVRRAIEAEGIPHTIVSCNFFASYFLSTLSQPGVTTPPRDKVVI 179
             HA+ P   T+  K+ +R AI+A GI HT +    FA+YF   LSQ G   PP++KV I
Sbjct: 130 MGHAMPPGSETFDQKMEIRNAIKAAGISHTYLVGACFAAYFGGNLSQMGTLFPPKNKVDI 189

Query: 180 LGDGNPKCVFNKEDDIGTYTIRAVSDPRTLNKILYIRPPANTLSFNDLVSLWEKKIGKTL 239
            GDGN K VF  EDD+  YT + ++DPRTLNK +Y+RP  N L+  +LV +WEK   K L
Sbjct: 190 YGDGNVKVVFVDEDDMAKYTAKTLNDPRTLNKTVYVRPTDNILTQMELVQIWEKLTEKEL 249

Query: 240 ERVYVPEDQVLKQIKESPVPNSVMLAISHAVYVKGDQTNFEIEQSFGVEASSLYPDVKYT 299
           E+ YV  +  L  I++  + +   L   + +Y +G  T+ E+      EA+ LYPDVKY 
Sbjct: 250 EKTYVSGNDFLADIEDKEISHQAGLGHFYHIYYEGCLTDHEVGDD--EEATKLYPDVKYK 307

Query: 300 TVDELLDQFV 309
            +DE L  FV
Sbjct: 308 RMDEYLKIFV 317