Miyakogusa Predicted Gene

Lj3g3v3360900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3360900.1 tr|G7JHC4|G7JHC4_MEDTR Isoflavone reductase-like
protein OS=Medicago truncatula GN=MTR_4g070360 PE=4,85.39,0,BLR3334
PROTEIN,NULL; NAD DEPENDENT EPIMERASE/DEHYDRATASE,NULL; seg,NULL;
NAD(P)-binding Rossmann-fo,CUFF.45677.1
         (310 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G34540.1 | Symbols:  | NmrA-like negative transcriptional reg...   390   e-109
AT4G39230.1 | Symbols:  | NmrA-like negative transcriptional reg...   296   2e-80
AT1G75290.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   293   1e-79
AT1G75280.1 | Symbols:  | NmrA-like negative transcriptional reg...   293   1e-79
AT1G75300.1 | Symbols:  | NmrA-like negative transcriptional reg...   265   3e-71
AT1G19540.1 | Symbols:  | NmrA-like negative transcriptional reg...   259   2e-69
AT1G32100.1 | Symbols: ATPRR1, PRR1 | pinoresinol reductase 1 | ...   201   7e-52
AT4G13660.1 | Symbols: ATPRR2, PRR2 | pinoresinol reductase 2 | ...   187   1e-47

>AT4G34540.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr4:16500506-16501932
           FORWARD LENGTH=306
          Length = 306

 Score =  390 bits (1002), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/313 (61%), Positives = 236/313 (75%), Gaps = 10/313 (3%)

Query: 1   MEE---KSKILIIGATGFLGYNLAETSLKFGHPTFALVRDSAFSDPIKSQKLQFLSHAGA 57
           MEE   KS++LIIGATG LG  L   S++ GHPTFAL+R++  SD +KS     LS AG 
Sbjct: 1   MEEEKKKSRVLIIGATGRLGNYLTRFSIESGHPTFALIRNTTLSDKLKS-----LSDAGV 55

Query: 58  TLLKGSLQDEASIVDAVKLVDVVICAVSSKQTLDQKLLIRVIKQLGTIKRFVPSEFGSDP 117
           TLLKGSL+DE S+ +AV  VDVVI A+ SK  LDQKLL+RVIKQ G+IKRF+P+E+G++P
Sbjct: 56  TLLKGSLEDEGSLAEAVSKVDVVISAIPSKHVLDQKLLVRVIKQAGSIKRFIPAEYGANP 115

Query: 118 IKARVTELDDGYNFYAPKIEIRRLVEAEGIPYTYISCNFFMKVLLPSLAQPGLEAPPRDK 177
            K +V++LD  ++FY+ K EIR ++E+EGIPYTYI C  FM+VLLPSL QPGL++PP DK
Sbjct: 116 DKTQVSDLD--HDFYSKKSEIRHMIESEGIPYTYICCGLFMRVLLPSLVQPGLQSPPTDK 173

Query: 178 VTIFGDGNTKAVFMKESDVAAFTISAVDDPRTLNKVVYLRPPGNVYSLNELVEMWETKIG 237
           VT+FGDGN KAVF+ + DVAAFTI  +DDPRTLNK +YL PPGN+ S+N+LVE+WE KI 
Sbjct: 174 VTVFGDGNVKAVFVNDVDVAAFTIKTIDDPRTLNKTLYLSPPGNICSMNDLVELWEGKIE 233

Query: 238 XXXXXXXXXXXXXXXXINGTSFPSNSKMLFIYSAFIKGDHTYFDIESSSGVNGTELYPQL 297
                           I  T +P N +M+FIYS FIKGDHTYFDIES  GVNGTELYP +
Sbjct: 234 KKLEKTFATENQLLKKIKETPYPDNMEMVFIYSVFIKGDHTYFDIESCGGVNGTELYPDV 293

Query: 298 KYTTVSEFLDTLI 310
           KY TVSEFLDTL+
Sbjct: 294 KYMTVSEFLDTLL 306


>AT4G39230.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr4:18266024-18267604
           REVERSE LENGTH=308
          Length = 308

 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/310 (47%), Positives = 192/310 (61%), Gaps = 2/310 (0%)

Query: 1   MEEKSKILIIGATGFLGYNLAETSLKFGHPTFALVRDSAFSDPIKSQKLQFLSHAGATLL 60
           M  KSKIL IG TG++G  + E S + GHPT  LVR+S  + P +S  ++   + G   L
Sbjct: 1   MTSKSKILFIGGTGYIGKYIVEASARSGHPTLVLVRNSTLTSPSRSSTIENFKNLGVQFL 60

Query: 61  KGSLQDEASIVDAVKLVDVVICAVSSKQTLDQKLLIRVIKQLGTIKRFVPSEFGSDPIKA 120
            G L D  S+V+++K  DVVI  V       Q  +I  IK+ G +KRF PSEFG+D    
Sbjct: 61  LGDLDDHTSLVNSIKQADVVISTVGHSLLGHQYKIISAIKEAGNVKRFFPSEFGND--VD 118

Query: 121 RVTELDDGYNFYAPKIEIRRLVEAEGIPYTYISCNFFMKVLLPSLAQPGLEAPPRDKVTI 180
           RV  ++   + YA K +IRR +EAEGIPYTY+SCNFF    LP+LAQPG  + PRDKV +
Sbjct: 119 RVFTVEPAKSAYATKAKIRRTIEAEGIPYTYVSCNFFAGYFLPTLAQPGATSAPRDKVIV 178

Query: 181 FGDGNTKAVFMKESDVAAFTISAVDDPRTLNKVVYLRPPGNVYSLNELVEMWETKIGXXX 240
            GDGN KAVF KE D+  +TI+AVDDPRTLNK++Y+RPP N YS N+LV +WE KIG   
Sbjct: 179 LGDGNPKAVFNKEEDIGTYTINAVDDPRTLNKILYIRPPMNTYSFNDLVSLWENKIGKTL 238

Query: 241 XXXXXXXXXXXXXINGTSFPSNSKMLFIYSAFIKGDHTYFDIESSSGVNGTELYPQLKYT 300
                        I  +S P N  +   +  F+KG HT F+IE S GV  +ELYP +KYT
Sbjct: 239 ERIYVPEEQLLKQIIESSPPLNVMLSLCHCVFVKGGHTSFEIEPSFGVEASELYPDVKYT 298

Query: 301 TVSEFLDTLI 310
           TV E L+  +
Sbjct: 299 TVDEILNQYV 308


>AT1G75290.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr1:28253890-28255173 FORWARD LENGTH=318
          Length = 318

 Score =  293 bits (750), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 150/306 (49%), Positives = 192/306 (62%), Gaps = 4/306 (1%)

Query: 3   EKSKILIIGATGFLGYNLAETSLKFGHPTFALVRDSAFSDPIKSQKLQFLSHAGATLLKG 62
           EKSKIL+IG TG +G  + E S+K GH T ALVR+++ SDP K + +Q     G TLL G
Sbjct: 4   EKSKILVIGGTGHIGKLIIEASVKAGHSTLALVREASLSDPNKGKTVQNFKDFGVTLLHG 63

Query: 63  SLQDEASIVDAVKLVDVVICAVSSKQTLDQKLLIRVIKQLGTIKRFVPSEFGSDPIKARV 122
            L D  S+V A+K  DVVI  V S Q LDQ  +I  IK+ G +KRF+PSEFG D  K+  
Sbjct: 64  DLNDHESLVKAIKQADVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGMDVDKSSA 123

Query: 123 TELDDGYNFYAPKIEIRRLVEAEGIPYTYISCNFFMKVLLPSLAQ--PGLEAPPRDKVTI 180
            E     + +  K++ RR +EAEGIPYTY+  N+F    LP+L Q  PGL +PPRDKV I
Sbjct: 124 VE--PAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAGYYLPTLVQLEPGLTSPPRDKVKI 181

Query: 181 FGDGNTKAVFMKESDVAAFTISAVDDPRTLNKVVYLRPPGNVYSLNELVEMWETKIGXXX 240
           FGDGN KAV  KE D+AA+TI AVDDPRTLNK +Y+ PP N  S+NE+V +WE KIG   
Sbjct: 182 FGDGNVKAVINKEEDIAAYTIKAVDDPRTLNKTLYINPPNNTLSMNEIVTLWEKKIGKSV 241

Query: 241 XXXXXXXXXXXXXINGTSFPSNSKMLFIYSAFIKGDHTYFDIESSSGVNGTELYPQLKYT 300
                        I  +  P N  +   ++ F+KGD T F IE S G   +ELYP +KYT
Sbjct: 242 EKIYMSEEQIFKSIQESPVPFNVLLSINHAVFVKGDQTNFTIEPSFGFEASELYPDIKYT 301

Query: 301 TVSEFL 306
           ++ E+L
Sbjct: 302 SIDEYL 307


>AT1G75280.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr1:28252030-28253355
           FORWARD LENGTH=310
          Length = 310

 Score =  293 bits (749), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 152/306 (49%), Positives = 194/306 (63%), Gaps = 5/306 (1%)

Query: 3   EKSKILIIGATGFLGYNLAETSLKFGHPTFALVRDSAFSDPIKSQKLQFLSHAGATLLKG 62
           EKSKIL+IG TG++G  L E S K GH TFALVR++  SDP+K + +Q     G T+L G
Sbjct: 4   EKSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHG 63

Query: 63  SLQDEASIVDAVKLVDVVICAVSSKQTLDQKLLIRVIKQLGTIKRFVPSEFGSDPIKARV 122
            L D  S+V A+K VDVVI  V S Q LDQ  +I  IK+ G +KRF+PSEFG D    R 
Sbjct: 64  DLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVD--VDRT 121

Query: 123 TELDDGYNFYAPKIEIRRLVEAEGIPYTYISCNFFMKVLLPSLAQ--PGLEAPPRDKVTI 180
           + ++   + +A KI+IRR +EAEGIPYTY     F    LP+L Q  PGL +PPRDKVTI
Sbjct: 122 SAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVTI 181

Query: 181 FGDGNTKAVFMKESDVAAFTISAVDDPRTLNKVVYLRPPGNVYSLNELVEMWETKIGXXX 240
            GDGN KAV  KE D+AA+TI AVDDPRTLNK++Y++P  N  S+NE+V +WE KIG   
Sbjct: 182 LGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKSL 241

Query: 241 XXXXXXXXXXXXXINGTSFPSNSKMLFIYSAFIKGDHTYFDIESSSGVNGTELYPQLKYT 300
                        I  +  P N  +   ++ F+ GD T   IE S GV  +ELYP +KYT
Sbjct: 242 EKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNGD-TNISIEPSFGVEASELYPDVKYT 300

Query: 301 TVSEFL 306
           +V E+L
Sbjct: 301 SVDEYL 306


>AT1G75300.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr1:28255552-28256927
           FORWARD LENGTH=322
          Length = 322

 Score =  265 bits (677), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 142/322 (44%), Positives = 191/322 (59%), Gaps = 25/322 (7%)

Query: 3   EKSKILIIGATGFLGYNLAETSLKFGHPTFALVRDSAFSDPIKSQKLQFLSHAGATLLKG 62
           EKSKIL+IG TG++G  + E S K G+PTFALVR+++ SDP+KS+ +Q     G T+L G
Sbjct: 4   EKSKILVIGGTGYMGEFIVEGSAKAGNPTFALVREASLSDPVKSKTIQSFKDLGVTILHG 63

Query: 63  SLQDEASIVDAVKLVDVVICAVSSKQTLDQKLLIRVIKQLGTIKRFVPSEFGSDPIKARV 122
            L D  S+V A+K VDVVI  +  KQ  DQ  +I  IK+ G +KRF+P+EFG D    R 
Sbjct: 64  DLNDHESLVKAIKQVDVVISTIGHKQIFDQTKIISAIKEAGNVKRFLPAEFGIDV--ERT 121

Query: 123 TELDDGYNFYAPKIEIRRLVEAEGIPYTYISCN----FFMKVLLPSLAQPGL-------- 170
           + ++   + +A K++IRR +EAEGIPYTY+  N    F+++ LL    + GL        
Sbjct: 122 SAVEPAKSLFAGKVQIRRAIEAEGIPYTYVVSNCSAGFYLRTLLQ--FESGLISHTRDKA 179

Query: 171 ------EAPPRDKVTIFGDGNTKAVFMKESDVAAFTISAVDDPRTLNKVVYLRPPGNVYS 224
                   PPRDKVTI GDGN K V  KE DVAA+ I AVDD RTLNK +Y+ PP N+ S
Sbjct: 180 IIFGDKNVPPRDKVTILGDGNAKVVINKEEDVAAYMIKAVDDLRTLNKTLYISPPNNILS 239

Query: 225 LNELVEMWETKIGXXXXXXXXXXXXXXXXINGTSFPSNSKMLFIYSAFIKGDHTYFDIES 284
           +NE+V +WE KIG                I     P +      ++ F+KGD T F IE 
Sbjct: 240 MNEMVTLWEKKIGKSLEKTHISEEQILKSIQ---VPIDVFKSINHAVFVKGDQTSFTIEP 296

Query: 285 SSGVNGTELYPQLKYTTVSEFL 306
             G   + LYP +KYT++ E+L
Sbjct: 297 WFGEEASVLYPDVKYTSIDEYL 318


>AT1G19540.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr1:6765713-6767247 FORWARD
           LENGTH=310
          Length = 310

 Score =  259 bits (661), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 138/310 (44%), Positives = 192/310 (61%), Gaps = 6/310 (1%)

Query: 5   SKILIIGATGFLGYNLAETSLKFGHPTFALVRDSAFSDPIKSQKLQFLSHAGATLLKGSL 64
           SKIL+IGATG +G  L E S K GH TFALVR+++ SDP+K+Q ++     G T+L GSL
Sbjct: 3   SKILVIGATGLIGKVLVEESAKSGHATFALVREASLSDPVKAQLVERFKDLGVTILYGSL 62

Query: 65  QDEASIVDAVKLVDVVICAVSSKQT--LDQKLLIRVIKQLGTIKRFVPSEFGSDPIKARV 122
            D+ S+V A+K VDVVI AV   QT  L+Q  +I  IK+ G +KRF+PSEFG+D    R 
Sbjct: 63  SDKESLVKAIKQVDVVISAVGRFQTEILNQTNIIDAIKESGNVKRFLPSEFGND--VDRT 120

Query: 123 TELDDGYNFYAPKIEIRRLVEAEGIPYTYISCNFFMKVLLPSLAQPG--LEAPPRDKVTI 180
             ++   + +  K +IRR +EA  IPYTY+    F  + +P L Q    L +PPRDKV+I
Sbjct: 121 VAIEPTLSEFITKAQIRRAIEAAKIPYTYVVSGCFAGLFVPCLGQCHLRLRSPPRDKVSI 180

Query: 181 FGDGNTKAVFMKESDVAAFTISAVDDPRTLNKVVYLRPPGNVYSLNELVEMWETKIGXXX 240
           +  GN KA+   E D+ A+T+ AVDDPRTLNK++Y+ PP  + S N++V +WE KIG   
Sbjct: 181 YDTGNGKAIVNTEEDIVAYTLKAVDDPRTLNKILYIHPPNYIVSQNDMVGLWEEKIGKTL 240

Query: 241 XXXXXXXXXXXXXINGTSFPSNSKMLFIYSAFIKGDHTYFDIESSSGVNGTELYPQLKYT 300
                        I  +  P +  +  I++  +K D T F I+ S GV  +ELYP++KYT
Sbjct: 241 EKTYVSEEELLKTIQESKPPMDFLVGLIHTILVKSDFTSFTIDPSFGVEASELYPEVKYT 300

Query: 301 TVSEFLDTLI 310
           +V EFL+  I
Sbjct: 301 SVDEFLNRFI 310


>AT1G32100.1 | Symbols: ATPRR1, PRR1 | pinoresinol reductase 1 |
           chr1:11546472-11547953 REVERSE LENGTH=317
          Length = 317

 Score =  201 bits (510), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 115/309 (37%), Positives = 163/309 (52%), Gaps = 8/309 (2%)

Query: 3   EKSKILIIGATGFLGYNLAETSLKFGHPTFALVRDSAFSDPIKSQKLQFLSHAGATLLKG 62
           EK+++L++GATG++G  +    L  GH T+ L R     +  K Q        GA +++G
Sbjct: 8   EKTRVLVVGATGYIGKRIVRACLAEGHETYVLQRPEIGLEIEKVQLFLSFKKLGARIVEG 67

Query: 63  SLQDEASIVDAVKLVDVVICAVS-----SKQTLDQKLLIRVIKQLGTIKRFVPSEFGSDP 117
           S  D  S+V AVKLVDVV+ A+S     S   L Q  L+  IK+ G +KRF+PSEFG DP
Sbjct: 68  SFSDHQSLVSAVKLVDVVVSAMSGVHFRSHNILVQLKLVEAIKEAGNVKRFLPSEFGMDP 127

Query: 118 IKARVTELDDGYNFYAPKIEIRRLVEAEGIPYTYISCNFFMKVLLPSLAQPGLEAPPRDK 177
            +     L  G   +  K+E+R+ +EA GIPYTY+    F      +L+Q     PP++K
Sbjct: 128 PRMG-HALPPGRETFDQKMEVRQAIEAAGIPYTYVVGACFAAYFAGNLSQMVTLLPPKEK 186

Query: 178 VTIFGDGNTKAVFMKESDVAAFTISAVDDPRTLNKVVYLRPPGNVYSLNELVEMWETKIG 237
           V I+GDGN K VF  E D+A +T   ++DPRTLNK V +RPP NV +  ELV++WE   G
Sbjct: 187 VNIYGDGNVKVVFADEDDIAKYTAKTLNDPRTLNKTVNIRPPDNVLTQLELVQIWEKLTG 246

Query: 238 XXXXXXXXXXXXXXXXINGTSFPSNSKMLFIYSAFIKGDHTYFDIESSSGVNGTELYPQL 297
                           I     P  + +   Y  F +G  T  D E       + LYP +
Sbjct: 247 KELEKTNIAAQDFLANIEQMEIPHQAGIGHFYHIFYEGCLT--DHEVGEDEEASSLYPDV 304

Query: 298 KYTTVSEFL 306
           KY  + ++L
Sbjct: 305 KYKRMDDYL 313


>AT4G13660.1 | Symbols: ATPRR2, PRR2 | pinoresinol reductase 2 |
           chr4:7946283-7948252 FORWARD LENGTH=317
          Length = 317

 Score =  187 bits (474), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/316 (35%), Positives = 161/316 (50%), Gaps = 14/316 (4%)

Query: 3   EKSKILIIGATGFLGYNLAETSLKFGHPTFALVRDSAFSDPIKSQKLQFLSHAGATLLKG 62
           EK+++L++G TG LG  +    L  GH T+ L R     D  K Q L      GA L++G
Sbjct: 8   EKTRVLVVGGTGSLGRRIVSACLAEGHETYVLQRPEIGVDIEKVQLLLSFKRLGAHLVEG 67

Query: 63  SLQDEASIVDAVKLVDVVICAVSSKQTLDQKL-----LIRVIKQLGTIKRFVPSEFGSDP 117
           S  D  S+V AVK VDVV+ A+S        +     L+  IK+ G +KRF+PSEFG DP
Sbjct: 68  SFSDHQSLVSAVKQVDVVVSAMSGVHFRTHNIPVQLKLVAAIKEAGNVKRFLPSEFGMDP 127

Query: 118 IKARVTELDDGYNFYAPKIEIRRLVEAEGIPYTYISCNFFMKVLLPSLAQPGLEAPPRDK 177
            +     +  G   +  K+EIR  ++A GI +TY+    F      +L+Q G   PP++K
Sbjct: 128 SRMG-HAMPPGSETFDQKMEIRNAIKAAGISHTYLVGACFAAYFGGNLSQMGTLFPPKNK 186

Query: 178 VTIFGDGNTKAVFMKESDVAAFTISAVDDPRTLNKVVYLRPPGNVYSLNELVEMWETKIG 237
           V I+GDGN K VF+ E D+A +T   ++DPRTLNK VY+RP  N+ +  ELV++WE    
Sbjct: 187 VDIYGDGNVKVVFVDEDDMAKYTAKTLNDPRTLNKTVYVRPTDNILTQMELVQIWEKLTE 246

Query: 238 XXXXXXXXXXXXXXXXINGTSFPSNSKMLFIYSAFIKG---DHTYFDIESSSGVNGTELY 294
                           I        + +   Y  + +G   DH   D E +     T+LY
Sbjct: 247 KELEKTYVSGNDFLADIEDKEISHQAGLGHFYHIYYEGCLTDHEVGDDEEA-----TKLY 301

Query: 295 PQLKYTTVSEFLDTLI 310
           P +KY  + E+L   +
Sbjct: 302 PDVKYKRMDEYLKIFV 317