Miyakogusa Predicted Gene

Lj3g3v3348630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3348630.1 Non Chatacterized Hit- tr|H9MB41|H9MB41_PINLA
Uncharacterized protein (Fragment) OS=Pinus
lambertian,42.75,6e-17,seg,NULL; 2-HYDROXYACID DEHYDROGENASE,NULL;
2-HYDROXYACID DEHYDROGENASE-RELATED,NULL,CUFF.45665.1
         (312 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19400.2 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   275   2e-74
AT1G19400.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   275   2e-74
AT1G75180.3 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   274   5e-74
AT1G75180.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   274   5e-74
AT1G75180.2 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   238   3e-63
AT1G01500.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   164   1e-40

>AT1G19400.2 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:6712222-6713676 REVERSE LENGTH=303
          Length = 303

 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 143/262 (54%), Positives = 190/262 (72%), Gaps = 11/262 (4%)

Query: 16  GYSVAR-HSY-QPSIKGSLPWLDIRVFYVRVCKCELDDSTPEILTLSHVPLNPDTLLEVN 73
            Y ++R H+Y Q S + S PWLD+RVFYVR+    ++DSTPE+LT++H+PL+PDTLLE+N
Sbjct: 13  AYQISRYHNYNQHSSRSSSPWLDLRVFYVRISNFVVEDSTPEVLTINHIPLDPDTLLEIN 72

Query: 74  GVRTSIYSDGISTLLKRDRIDRKSEEVTFVSTDSIRMSGSVKFEVFDKDILLLSGALELC 133
           GVR  +YS+G S+ L+RDR+D+KSEE T+VSTD+IR++GSVKFEV+DK+ L+LSG LE+ 
Sbjct: 73  GVRMGMYSEGGSSQLRRDRVDKKSEEATYVSTDNIRLTGSVKFEVYDKNELVLSGTLEMS 132

Query: 134 HSNGDVGESSYNGQRWSMNCESNITHGTSFFKGKQLLLPD--SKLPTVEVYIAGSFSGTP 191
            SNG  GES     RW MNCE+ +T G+ F K K +   +  S LPT+EVY+ G FSGTP
Sbjct: 133 GSNGFTGESK---NRWKMNCEAEVTAGSGFLKEKSINGQELSSPLPTIEVYVTGCFSGTP 189

Query: 192 IILTKTLQLSSQKRHARKGVLDAIPEHEATEDGRDPSSELALQAPDYLYNKHEDEDYNTL 251
           IILTKTLQL  +K+ +R+  LDAIPE+E  E  +D S  L LQA    Y  +++E    +
Sbjct: 190 IILTKTLQLGLKKKQSRRMALDAIPEYETAEPQKDTSYALDLQATTE-YGNYKEEYEGDM 248

Query: 252 YSRTAYAEGEDGELSWFNAGVR 273
           Y R   +E  DGE+SWFNAGVR
Sbjct: 249 YWR---SECIDGEMSWFNAGVR 267


>AT1G19400.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:6712222-6713676 REVERSE LENGTH=303
          Length = 303

 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 143/262 (54%), Positives = 190/262 (72%), Gaps = 11/262 (4%)

Query: 16  GYSVAR-HSY-QPSIKGSLPWLDIRVFYVRVCKCELDDSTPEILTLSHVPLNPDTLLEVN 73
            Y ++R H+Y Q S + S PWLD+RVFYVR+    ++DSTPE+LT++H+PL+PDTLLE+N
Sbjct: 13  AYQISRYHNYNQHSSRSSSPWLDLRVFYVRISNFVVEDSTPEVLTINHIPLDPDTLLEIN 72

Query: 74  GVRTSIYSDGISTLLKRDRIDRKSEEVTFVSTDSIRMSGSVKFEVFDKDILLLSGALELC 133
           GVR  +YS+G S+ L+RDR+D+KSEE T+VSTD+IR++GSVKFEV+DK+ L+LSG LE+ 
Sbjct: 73  GVRMGMYSEGGSSQLRRDRVDKKSEEATYVSTDNIRLTGSVKFEVYDKNELVLSGTLEMS 132

Query: 134 HSNGDVGESSYNGQRWSMNCESNITHGTSFFKGKQLLLPD--SKLPTVEVYIAGSFSGTP 191
            SNG  GES     RW MNCE+ +T G+ F K K +   +  S LPT+EVY+ G FSGTP
Sbjct: 133 GSNGFTGESK---NRWKMNCEAEVTAGSGFLKEKSINGQELSSPLPTIEVYVTGCFSGTP 189

Query: 192 IILTKTLQLSSQKRHARKGVLDAIPEHEATEDGRDPSSELALQAPDYLYNKHEDEDYNTL 251
           IILTKTLQL  +K+ +R+  LDAIPE+E  E  +D S  L LQA    Y  +++E    +
Sbjct: 190 IILTKTLQLGLKKKQSRRMALDAIPEYETAEPQKDTSYALDLQATTE-YGNYKEEYEGDM 248

Query: 252 YSRTAYAEGEDGELSWFNAGVR 273
           Y R   +E  DGE+SWFNAGVR
Sbjct: 249 YWR---SECIDGEMSWFNAGVR 267


>AT1G75180.3 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:28216150-28217911 REVERSE
           LENGTH=315
          Length = 315

 Score =  274 bits (701), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 135/238 (56%), Positives = 180/238 (75%), Gaps = 3/238 (1%)

Query: 39  VFYVRVCKCELDDSTPEILTLSHVPLNPDTLLEVNGVRTSIYSDGISTLLKRDRIDRKSE 98
           VFYVR+   ++D STPE+LT++H+PL+PD+LLE+NGVR S+YS+G+S+ L+RDR+D+KSE
Sbjct: 42  VFYVRISNFKVDHSTPEVLTITHIPLDPDSLLEINGVRMSMYSEGVSSQLRRDRVDKKSE 101

Query: 99  EVTFVSTDSIRMSGSVKFEVFDKDILLLSGALELCHSNGDVGESSYNGQRWSMNCESNIT 158
             TF+STD+IR+SGSVKFEV+DKD L+LSG LE+  SNG  GES ++ +RW+MNCE+ IT
Sbjct: 102 VATFISTDNIRLSGSVKFEVYDKDELVLSGTLEMSGSNGFTGESKHSVKRWNMNCEAEIT 161

Query: 159 HGTSFFKGKQLLLPD--SKLPTVEVYIAGSFSGTPIILTKTLQLSSQKRHARKGVLDAIP 216
             + F K K +   +  S LPT+EVY+ G FSGTPIILTKTLQL  +K+H R   LD+IP
Sbjct: 162 AESGFLKEKHIGGSELSSPLPTIEVYVTGCFSGTPIILTKTLQLGFRKKHGRVTALDSIP 221

Query: 217 EHEATEDGRDPSSELALQAPDYLYNKHEDE-DYNTLYSRTAYAEGEDGELSWFNAGVR 273
           E+E  E  +  SSEL  Q  +Y   K E E +++ +Y    YA+GEDGE+SWFNAGVR
Sbjct: 222 EYETDEPHKGNSSELDYQVTEYGSYKQEYEGEHSDMYWNREYADGEDGEMSWFNAGVR 279


>AT1G75180.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:28216150-28217911 REVERSE
           LENGTH=315
          Length = 315

 Score =  274 bits (701), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 135/238 (56%), Positives = 180/238 (75%), Gaps = 3/238 (1%)

Query: 39  VFYVRVCKCELDDSTPEILTLSHVPLNPDTLLEVNGVRTSIYSDGISTLLKRDRIDRKSE 98
           VFYVR+   ++D STPE+LT++H+PL+PD+LLE+NGVR S+YS+G+S+ L+RDR+D+KSE
Sbjct: 42  VFYVRISNFKVDHSTPEVLTITHIPLDPDSLLEINGVRMSMYSEGVSSQLRRDRVDKKSE 101

Query: 99  EVTFVSTDSIRMSGSVKFEVFDKDILLLSGALELCHSNGDVGESSYNGQRWSMNCESNIT 158
             TF+STD+IR+SGSVKFEV+DKD L+LSG LE+  SNG  GES ++ +RW+MNCE+ IT
Sbjct: 102 VATFISTDNIRLSGSVKFEVYDKDELVLSGTLEMSGSNGFTGESKHSVKRWNMNCEAEIT 161

Query: 159 HGTSFFKGKQLLLPD--SKLPTVEVYIAGSFSGTPIILTKTLQLSSQKRHARKGVLDAIP 216
             + F K K +   +  S LPT+EVY+ G FSGTPIILTKTLQL  +K+H R   LD+IP
Sbjct: 162 AESGFLKEKHIGGSELSSPLPTIEVYVTGCFSGTPIILTKTLQLGFRKKHGRVTALDSIP 221

Query: 217 EHEATEDGRDPSSELALQAPDYLYNKHEDE-DYNTLYSRTAYAEGEDGELSWFNAGVR 273
           E+E  E  +  SSEL  Q  +Y   K E E +++ +Y    YA+GEDGE+SWFNAGVR
Sbjct: 222 EYETDEPHKGNSSELDYQVTEYGSYKQEYEGEHSDMYWNREYADGEDGEMSWFNAGVR 279


>AT1G75180.2 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:28216772-28217911 REVERSE
           LENGTH=243
          Length = 243

 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 115/199 (57%), Positives = 154/199 (77%), Gaps = 2/199 (1%)

Query: 39  VFYVRVCKCELDDSTPEILTLSHVPLNPDTLLEVNGVRTSIYSDGISTLLKRDRIDRKSE 98
           VFYVR+   ++D STPE+LT++H+PL+PD+LLE+NGVR S+YS+G+S+ L+RDR+D+KSE
Sbjct: 42  VFYVRISNFKVDHSTPEVLTITHIPLDPDSLLEINGVRMSMYSEGVSSQLRRDRVDKKSE 101

Query: 99  EVTFVSTDSIRMSGSVKFEVFDKDILLLSGALELCHSNGDVGESSYNGQRWSMNCESNIT 158
             TF+STD+IR+SGSVKFEV+DKD L+LSG LE+  SNG  GES ++ +RW+MNCE+ IT
Sbjct: 102 VATFISTDNIRLSGSVKFEVYDKDELVLSGTLEMSGSNGFTGESKHSVKRWNMNCEAEIT 161

Query: 159 HGTSFFKGKQLLLPD--SKLPTVEVYIAGSFSGTPIILTKTLQLSSQKRHARKGVLDAIP 216
             + F K K +   +  S LPT+EVY+ G FSGTPIILTKTLQL  +K+H R   LD+IP
Sbjct: 162 AESGFLKEKHIGGSELSSPLPTIEVYVTGCFSGTPIILTKTLQLGFRKKHGRVTALDSIP 221

Query: 217 EHEATEDGRDPSSELALQA 235
           E+E  E  +  SSEL  Q+
Sbjct: 222 EYETDEPHKGNSSELDYQS 240


>AT1G01500.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:185260-186573 FORWARD LENGTH=327
          Length = 327

 Score =  164 bits (414), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/256 (40%), Positives = 146/256 (57%), Gaps = 22/256 (8%)

Query: 34  WLDIRVFYVRVCKCELDDSTPEILTLSHVPLNPDTLLEVNGVRTSIYSDGISTLLKRDRI 93
           WL++R+FYVR+  C +++  P+ LTL H        LEVNGVR    S   S  L+RDR+
Sbjct: 42  WLEVRLFYVRIAPCVVEN-VPDFLTLRHPRRETGASLEVNGVRVP-SSQTASLKLRRDRV 99

Query: 94  DRKSEEVTFVSTDSIRMSGSVKFEVFDKDILLLSGALELCHSNGDVGESSYNGQRWSMNC 153
           DR+S EVT+VST+++R++G V FEV+D + ++L G L+      + G  S     W M+C
Sbjct: 100 DRESSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRIEGAWNNGTVSDPKTGWGMDC 159

Query: 154 ESNITHG-------TSFFKGKQLLLPDSKLPTVEVYIAGSFSGTPIILTKTLQLSSQKRH 206
              + +G       + FF+ K  +      P+VEVYIAG   G P+ILTKT+Q S +++ 
Sbjct: 160 YIAMGNGHVSGPSASVFFQPKFGV----SSPSVEVYIAGCCGGVPVILTKTIQASPRRKV 215

Query: 207 ARKGVLDAIPEHEATEDGRDPSS---ELALQAPDYLYNKHEDE--DYNTLYSRTAYAEG- 260
           AR   LDAIPE E     +D  +   ELA Q+   +     DE  D +   ++  Y EG 
Sbjct: 216 ARHVTLDAIPEDEEVGKEQDIGTIGDELARQSKVQMMESEVDEYDDSDMKMAQRYYPEGM 275

Query: 261 ---EDGELSWFNAGVR 273
              EDG+LSWFNAGVR
Sbjct: 276 YVDEDGQLSWFNAGVR 291