Miyakogusa Predicted Gene

Lj3g3v3348620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3348620.1 Non Chatacterized Hit- tr|B8LN85|B8LN85_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,28.74,0.0000000002,seg,NULL,CUFF.45682.1
         (259 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05675.1 | Symbols:  | BTB/POZ domain-containing protein | ch...    55   5e-08
AT3G05675.2 | Symbols:  | BTB/POZ domain-containing protein | ch...    55   5e-08

>AT3G05675.1 | Symbols:  | BTB/POZ domain-containing protein |
           chr3:1658425-1659859 REVERSE LENGTH=441
          Length = 441

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 39/208 (18%)

Query: 37  PSTTTGDALY-FNDASTADIILRLFIDTADSPLESSPSVEDSDLHVYLHSTIL-RRAKYF 94
           P     +A Y F D S++DI++RL             + E  D  +Y HS IL  +++YF
Sbjct: 3   PRDNQAEASYTFGDRSSSDIVVRL------------RNEEGRDDWIYCHSKILSEKSQYF 50

Query: 95  SALLSDRWIGLVHPHTXXXXXXXXXXXDRGELFRLNLGVSPTPGSIQNHLTVLELLYT-S 153
           +  LSD+W     P                   R  + V        +H+ +L LLY  S
Sbjct: 51  ADRLSDKW-----PTCKILDS------------RYCVEVICQESDYDHHINLLRLLYVVS 93

Query: 154 DFA---NTVNNASTAXXXXXXXXXXXXXXCVRWCVAFLEAVPWTEEEENRVVSLIPFLNE 210
           D     N  +N  +A               V  CV +LEAVPW E EE  ++ ++P +  
Sbjct: 94  DDVHEDNLCHNVKSALGILSVAKELSCPQIVTACVNYLEAVPWEEGEEEEILRIVPRIG- 152

Query: 211 EESKELVARVSPVGEDACEAMLEGLISS 238
            E++ ++AR+ PV +    A+LE  +S+
Sbjct: 153 SEAEPILARLQPVDQS---AVLEIFVSA 177


>AT3G05675.2 | Symbols:  | BTB/POZ domain-containing protein |
           chr3:1658425-1659859 REVERSE LENGTH=441
          Length = 441

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 39/208 (18%)

Query: 37  PSTTTGDALY-FNDASTADIILRLFIDTADSPLESSPSVEDSDLHVYLHSTIL-RRAKYF 94
           P     +A Y F D S++DI++RL             + E  D  +Y HS IL  +++YF
Sbjct: 3   PRDNQAEASYTFGDRSSSDIVVRL------------RNEEGRDDWIYCHSKILSEKSQYF 50

Query: 95  SALLSDRWIGLVHPHTXXXXXXXXXXXDRGELFRLNLGVSPTPGSIQNHLTVLELLYT-S 153
           +  LSD+W     P                   R  + V        +H+ +L LLY  S
Sbjct: 51  ADRLSDKW-----PTCKILDS------------RYCVEVICQESDYDHHINLLRLLYVVS 93

Query: 154 DFA---NTVNNASTAXXXXXXXXXXXXXXCVRWCVAFLEAVPWTEEEENRVVSLIPFLNE 210
           D     N  +N  +A               V  CV +LEAVPW E EE  ++ ++P +  
Sbjct: 94  DDVHEDNLCHNVKSALGILSVAKELSCPQIVTACVNYLEAVPWEEGEEEEILRIVPRIG- 152

Query: 211 EESKELVARVSPVGEDACEAMLEGLISS 238
            E++ ++AR+ PV +    A+LE  +S+
Sbjct: 153 SEAEPILARLQPVDQS---AVLEIFVSA 177