Miyakogusa Predicted Gene

Lj3g3v3338520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3338520.1 Non Chatacterized Hit- tr|I3STE5|I3STE5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,84.98,0,BURP,BURP domain; no description,BURP domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.45892.1
         (213 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G49320.1 | Symbols: ATUSPL1, USPL1 | unknown seed protein lik...   195   2e-50
AT5G25610.1 | Symbols: RD22, ATRD22 | BURP domain-containing pro...   160   6e-40
AT1G70370.2 | Symbols: PG2 | polygalacturonase 2 | chr1:26513003...   107   9e-24
AT1G70370.1 | Symbols: PG2 | polygalacturonase 2 | chr1:26513003...   107   9e-24
AT1G23760.1 | Symbols: JP630, PG3 | BURP domain-containing prote...   104   5e-23
AT1G60390.1 | Symbols: PG1 | polygalacturonase 1 | chr1:22247611...    95   3e-20

>AT1G49320.1 | Symbols: ATUSPL1, USPL1 | unknown seed protein like 1
           | chr1:18246441-18247817 FORWARD LENGTH=280
          Length = 280

 Score =  195 bits (495), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/216 (43%), Positives = 138/216 (63%), Gaps = 6/216 (2%)

Query: 2   VFFTLKDLKVGKRMPIYFPKRDPATSPKFWPREKADSVPFSLNQLPNLLNFFSFSPDSPP 61
           ++FTL DLK+G ++ IYF K D    P    R++AD +PF+ ++L  LL+ FS + DSP 
Sbjct: 57  MYFTLNDLKLGTKLLIYFYKNDLQKLPPLLTRQQADLIPFTKSKLDFLLDHFSITKDSPQ 116

Query: 62  AKAMEDTLKECESKPIQGEVKFCATSLESMLDFTHSILGLESDDLQVFATSHLTKS---- 117
            KA+++TL  C++K I+GE KFC TSLES++D     +G    DL+V  T  +  +    
Sbjct: 117 GKAIKETLGHCDAKAIEGEHKFCGTSLESLIDLVKKTMGYNV-DLKVMTTKVMVPAQNSI 175

Query: 118 SVTFQNYTILENIMRISAPKMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNG-DKVE 176
           S    NYT +E    +   KM+ CH MPYPYAV+YCH  +  +RV++V+LV D+G  +V 
Sbjct: 176 SYALHNYTFVEAPKELVGIKMLGCHRMPYPYAVYYCHGHKGGSRVFEVNLVTDDGRQRVV 235

Query: 177 AMVVCHLDTSHWGSGHVSFQILGVTPGSSSVCHFFP 212
              VCH+DTS W + HV+F++L + P S+ VCHFFP
Sbjct: 236 GPAVCHMDTSTWDADHVAFKVLKMEPRSAPVCHFFP 271


>AT5G25610.1 | Symbols: RD22, ATRD22 | BURP domain-containing
           protein | chr5:8914498-8916684 REVERSE LENGTH=392
          Length = 392

 Score =  160 bits (405), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 121/214 (56%), Gaps = 8/214 (3%)

Query: 2   VFFTLKDLKVGKRMPIYFPKRDP-ATSPKFWPREKADSVPFSLNQLPNLLNFFSFSPDSP 60
           +FF  KDL  GK M + F   D       F PR +A++VPF   +    L  FS    S 
Sbjct: 175 LFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSE 234

Query: 61  PAKAMEDTLKECESKPIQGEVKFCATSLESMLDFTHSILGLESDDLQVFATS-HLTKSSV 119
            A+ M+ T++ECE++ + GE K+CATSLESM+DF+ S LG       V A S  + K + 
Sbjct: 235 EAEMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLG----KYHVRAVSTEVAKKNA 290

Query: 120 TFQNYTI-LENIMRISAPKMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDKVEAM 178
             Q Y I    + ++S  K V CH   YP+AVFYCH +     VY V L G+NG + +A+
Sbjct: 291 PMQKYKIAAAGVKKLSDDKSVVCHKQKYPFAVFYCH-KAMMTTVYAVPLEGENGMRAKAV 349

Query: 179 VVCHLDTSHWGSGHVSFQILGVTPGSSSVCHFFP 212
            VCH +TS W   H++F++L V PG+  VCHF P
Sbjct: 350 AVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFLP 383


>AT1G70370.2 | Symbols: PG2 | polygalacturonase 2 |
           chr1:26513003-26514998 REVERSE LENGTH=626
          Length = 626

 Score =  107 bits (266), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 103/214 (48%), Gaps = 16/214 (7%)

Query: 3   FFTLKDLKVGKRMPIYFPK-RDPATSPKFWPREKADSVPFSLNQLPNLLNFFSFSPDSPP 61
           FF    LK G  +P+  P  +D      F PR     +PFS ++L  +   F    +S  
Sbjct: 411 FFRESSLKEGTVIPM--PDIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTM 468

Query: 62  AKAMEDTLKECESKPIQGEVKFCATSLESMLDFTHSILGLESDDLQVFATSHLTKSSVTF 121
              + D + ECE  P  GE K C  S E M+DF  S+LG     + +  T ++  S    
Sbjct: 469 GGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRS---VVLRTTENVAGS---- 521

Query: 122 QNYTILENIMRISAPKM---VACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDKV--E 176
           +   ++  +  I+  K+   V+CH   YPY ++YCHS   + RVY+  L+  N  K    
Sbjct: 522 KEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVP-KVRVYEADLLELNSKKKINH 580

Query: 177 AMVVCHLDTSHWGSGHVSFQILGVTPGSSSVCHF 210
            + +CH+DTS WG  H +F  LG  PG   VCH+
Sbjct: 581 GIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHW 614


>AT1G70370.1 | Symbols: PG2 | polygalacturonase 2 |
           chr1:26513003-26514998 REVERSE LENGTH=626
          Length = 626

 Score =  107 bits (266), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 103/214 (48%), Gaps = 16/214 (7%)

Query: 3   FFTLKDLKVGKRMPIYFPK-RDPATSPKFWPREKADSVPFSLNQLPNLLNFFSFSPDSPP 61
           FF    LK G  +P+  P  +D      F PR     +PFS ++L  +   F    +S  
Sbjct: 411 FFRESSLKEGTVIPM--PDIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTM 468

Query: 62  AKAMEDTLKECESKPIQGEVKFCATSLESMLDFTHSILGLESDDLQVFATSHLTKSSVTF 121
              + D + ECE  P  GE K C  S E M+DF  S+LG     + +  T ++  S    
Sbjct: 469 GGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRS---VVLRTTENVAGS---- 521

Query: 122 QNYTILENIMRISAPKM---VACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDKV--E 176
           +   ++  +  I+  K+   V+CH   YPY ++YCHS   + RVY+  L+  N  K    
Sbjct: 522 KEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVP-KVRVYEADLLELNSKKKINH 580

Query: 177 AMVVCHLDTSHWGSGHVSFQILGVTPGSSSVCHF 210
            + +CH+DTS WG  H +F  LG  PG   VCH+
Sbjct: 581 GIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHW 614


>AT1G23760.1 | Symbols: JP630, PG3 | BURP domain-containing protein
           | chr1:8402142-8404147 FORWARD LENGTH=622
          Length = 622

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 12/212 (5%)

Query: 3   FFTLKDLKVGKRMPIYFPK-RDPATSPKFWPREKADSVPFSLNQLPNLLNFFSFSPDSPP 61
           FF    LK G    I+ P  +D      F PR     +PFS +++  +   F  + +S  
Sbjct: 407 FFRESMLKEG--TLIWMPDIKDKMPKRSFLPRSIVSKLPFSTSKIAEIKRVFHANDNSTM 464

Query: 62  AKAMEDTLKECESKPIQGEVKFCATSLESMLDFTHSILGLESDDLQVFATSHLTKSSVTF 121
              + D ++ECE  P   E K C  S E M+DF  S+LG  S  L+   +   +K  V  
Sbjct: 465 EGIITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLG-RSVVLRTTESVAGSKEKVMI 523

Query: 122 QNYTILENIMRISAPKMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDKVE---AM 178
                + N  R++  K V+CH   YPY ++YCHS   + RVY+  L+ D   K +    +
Sbjct: 524 GKVNGI-NGGRVT--KSVSCHQSLYPYLLYYCHSVP-KVRVYESDLL-DPKSKAKINHGI 578

Query: 179 VVCHLDTSHWGSGHVSFQILGVTPGSSSVCHF 210
            +CH+DTS WG+ H +F +LG  PG   VCH+
Sbjct: 579 AICHMDTSAWGANHGAFMLLGSRPGQIEVCHW 610


>AT1G60390.1 | Symbols: PG1 | polygalacturonase 1 |
           chr1:22247611-22249556 REVERSE LENGTH=624
          Length = 624

 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 16/214 (7%)

Query: 3   FFTLKDLKVGKRMPIYFPK-RDPATSPKFWPREKADSVPFSLNQLPNLLNFFSFSPDSPP 61
           FF    LK G  M +  P  +D      F PR    ++PFS + +  +   F    +S  
Sbjct: 409 FFREAMLKEGTLMQM--PDIKDKMPKRTFLPRNIVKNLPFSSSTIGEIWRVFGAGENSSM 466

Query: 62  AKAMEDTLKECESKPIQGEVKFCATSLESMLDFTHSILGLESDDLQVFATSHLTKSSVTF 121
           A  +   + ECE     GE K C  S E M+DF  S+LG              T++ V  
Sbjct: 467 AGIISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRG-------VVVRTTENVVGS 519

Query: 122 QNYTILENIMRISAP---KMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNG-DKVE- 176
           +   ++  +  I+     + V+CH   YPY ++YCHS     RVY+  L+     +K+  
Sbjct: 520 KKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRV-RVYETDLLDPKSLEKINH 578

Query: 177 AMVVCHLDTSHWGSGHVSFQILGVTPGSSSVCHF 210
            + +CH+DTS W   H +F  LG  PG   VCH+
Sbjct: 579 GVAICHIDTSAWSPSHGAFLALGSGPGQIEVCHW 612