Miyakogusa Predicted Gene

Lj3g3v3338290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3338290.1 Non Chatacterized Hit- tr|I1LJH0|I1LJH0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10455
PE,83.01,0,ResB,ResB-like domain; seg,NULL; CytC_Ccs1,Cytochrome c
biogenesis protein Ccs1/CcsB; FAMILY NOT NAM,CUFF.45638.1
         (562 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G49380.1 | Symbols:  | cytochrome c biogenesis protein family...   740   0.0  

>AT1G49380.1 | Symbols:  | cytochrome c biogenesis protein family |
           chr1:18276794-18279204 FORWARD LENGTH=547
          Length = 547

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/529 (67%), Positives = 427/529 (80%), Gaps = 5/529 (0%)

Query: 30  KFKPFPHNNHGAKRAHTFSFTTISCKLKSSQD--IKNKEGKSVSQKIVLSEASPPPLTE- 86
           K  PF   +    R    S  T +CKL+  QD   ++   +++++ I LS+++PP   E 
Sbjct: 14  KIHPFSRPSSYLCRTRNVSLIT-NCKLQKPQDGNQRSSSNRNLTKTISLSDSAPPVTEET 72

Query: 87  -DDXXXXXXXXXXXXKNRGGIFWVAKRLSRKVLQILSNLPLAIGEMFVIAFLMGLGTFID 145
            D              +  G     K L RKVL +LSNLPLAI EMF IA LM LGT I+
Sbjct: 73  GDGIVKGGGNGGGGGGDGRGGLGFLKILPRKVLSVLSNLPLAITEMFTIAALMALGTVIE 132

Query: 146 QGESPDHYFQKYPEDHPVLGFFTWRWVLALGFDHMFSSPIFXXXXXXXXXXXXXCTYTTQ 205
           QGE+PD YFQKYPED+PVLGFFTWRW+  LG DHM+S+PIF             CTYTTQ
Sbjct: 133 QGETPDFYFQKYPEDNPVLGFFTWRWISTLGLDHMYSAPIFLGMLVLLAASLMACTYTTQ 192

Query: 206 IPLIKVARRWSFLHSAEAIRKQEFSESLPRASIEDVGTLLMGAGYEVFLKGPSLYAFRGL 265
           IPL+KVARRWSF+ S EAI+KQEF+++LPRASI+D+G +LMG G+EVF+KGPSLYAF+GL
Sbjct: 193 IPLVKVARRWSFMKSDEAIKKQEFADTLPRASIQDLGMILMGDGFEVFMKGPSLYAFKGL 252

Query: 266 AGRLAPVGVHIAMILIMVGGTYSASGSFRGSVNVPQGLNFVVGDVLSPSGFLSTPTEDFN 325
           AGR AP+GVHIAM+LIMVGGT SA+GSFRGSV VPQGLNFV+GDVL+P GF S PT+ FN
Sbjct: 253 AGRFAPIGVHIAMLLIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLAPIGFFSIPTDAFN 312

Query: 326 TEVHVNRFYMDYYDSGEVSQFHTDLSLLNMDGKEVMRKTISVNDPLRYGGVTIYQTDWSI 385
           TEVHVNRF MDYYDSGEVSQFH+DLSL +++GKEV+RKTISVNDPLRYGGVT+YQTDWS 
Sbjct: 313 TEVHVNRFTMDYYDSGEVSQFHSDLSLRDLNGKEVLRKTISVNDPLRYGGVTVYQTDWSF 372

Query: 386 SALQILKDNKGPYNLAMAPLKINGDKKLYGTFLPVGDINSPDVKGISMLARDLQSIVLYD 445
           SALQ+ KD +GP+NLAMAP+KINGDKKLYGTFLPVGD N+P+VKGISMLARDLQSIV+YD
Sbjct: 373 SALQVTKDGEGPFNLAMAPIKINGDKKLYGTFLPVGDTNAPNVKGISMLARDLQSIVVYD 432

Query: 446 KEGKFAGVRRPSSKLPINIDGSEIIVVDAIGSSGLDLKTDPGVPIVYAGFGALMLTTCIS 505
            +GKFAG+RRPSSKLPI I+G +I++ DAIGS+GL+LKTDPGVP+VYAGFGALMLTTCIS
Sbjct: 433 LDGKFAGIRRPSSKLPIEINGMKIVIEDAIGSTGLELKTDPGVPVVYAGFGALMLTTCIS 492

Query: 506 YLSHSQIWALQDGTTVVIGGKTNRAKMEFPEEMNRLLDKVPELVKSSLS 554
           YLSHSQIWALQ+GT +V+GGKTNRAK +FP++MNRLLD+VPEL+K + S
Sbjct: 493 YLSHSQIWALQNGTALVVGGKTNRAKNQFPDDMNRLLDQVPELIKKNTS 541