Miyakogusa Predicted Gene
- Lj3g3v3338200.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3338200.1 Non Chatacterized Hit- tr|I1LJH9|I1LJH9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,83.09,0,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; coiled-coil,NULL; PENTATRICOPEPTIDE (P,CUFF.45634.1
(695 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 746 0.0
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 439 e-123
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 404 e-112
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 359 3e-99
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 4e-98
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 7e-98
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 4e-94
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 342 6e-94
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 9e-94
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 2e-92
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 336 4e-92
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 334 1e-91
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 2e-90
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 324 1e-88
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 6e-88
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 322 7e-88
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 3e-87
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 318 9e-87
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 317 1e-86
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 316 3e-86
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 2e-85
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 4e-85
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 8e-85
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 309 5e-84
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 8e-84
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 305 9e-83
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 303 3e-82
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 3e-82
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 302 5e-82
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 6e-82
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 301 1e-81
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 300 2e-81
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 300 3e-81
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 3e-81
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 299 4e-81
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 299 4e-81
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 7e-81
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 298 8e-81
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 1e-80
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 294 1e-79
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 292 4e-79
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 292 5e-79
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 7e-79
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 4e-78
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 1e-77
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 288 1e-77
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 9e-77
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 284 1e-76
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 283 2e-76
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 281 8e-76
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 279 5e-75
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 6e-75
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 278 9e-75
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 277 2e-74
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 275 7e-74
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 1e-73
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 273 3e-73
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 4e-73
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 2e-72
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 2e-72
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 2e-72
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 5e-72
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 9e-72
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 4e-71
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 4e-71
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 8e-71
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 265 8e-71
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 3e-70
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 7e-70
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 7e-70
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 8e-69
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 256 3e-68
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 255 6e-68
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 255 8e-68
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 253 3e-67
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 252 7e-67
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 7e-66
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 248 1e-65
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 246 4e-65
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 7e-65
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 8e-65
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 9e-65
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 4e-64
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 2e-63
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 234 1e-61
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 2e-61
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 232 6e-61
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 9e-61
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 2e-59
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 4e-59
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 8e-57
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 9e-57
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 4e-55
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 5e-55
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 8e-55
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 8e-55
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 9e-55
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 8e-54
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 5e-53
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 5e-52
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 4e-51
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 6e-51
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 6e-51
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 2e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 189 4e-48
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 1e-47
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 97 5e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 96 8e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 5e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 93 7e-19
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 9e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 7e-18
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 85 2e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 82 1e-15
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 4e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 6e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-13
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 1e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 74 2e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 74 5e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 5e-13
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 73 6e-13
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 71 3e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 65 2e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 64 3e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 9e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 60 5e-09
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 3e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 1e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 53 9e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 51 3e-06
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 50 7e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 8e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 49 8e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/675 (53%), Positives = 489/675 (72%), Gaps = 13/675 (1%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H+++IKSG + + NQL++LYS GLL+EA +FD+M RN +SWNA+I AY+K +N+
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 76 TQARALFDSAS-HRDLVSYNSMLSAYAGADGCDTVALDLFARM-QSARDTIGMDEITLTT 133
+AR LF+S + RDL++YN++LS +A DGC++ A+++F M + +D I +D+ T+TT
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG-CDGV 192
M+ LSAKL V YG+Q+H +VKT ND +KFA+SSLI MYSKCG F+E N+F+G C
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
VD V++NAM+AA CR+G +D AL+VFW+NPE NDT+SWNTLIAGY QNGY E AL + +
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
M E G+++++H+ +VL+ + LK LK+GK VHA VLKN SN+FVSSGIVD YCKCGN
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
M+YAES + G + ++ SS+I GYSS+G M +AKRLFDSLSE+N VVWTA+ GY+
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
+Q ++V +L R F E PD++++V+VLGAC++QA + GK+ H + LRT + MD+KL
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
+A VDMYSKCGN+ YAE+ F + +RD ++YN MIAG AHHG E K+ Q F++M +
Sbjct: 431 VTAFVDMYSKCGNVEYAERIFD--SSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEG 488
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
KPD ITF+ALLSACRHRGLV GEK+F SM E YN+ PE HY CM+D+YG+ +L+K
Sbjct: 489 GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDK 548
Query: 553 AVEFMRKI-PIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYA 611
A+E M I ++ DA I GAFLNAC N NT LVK+ EE+LL +E NGSRY+Q+AN YA
Sbjct: 549 AIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYA 608
Query: 612 AEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYG 671
+ G+W+EM RIR +MRGKE GCSW ++ H+FTS D SH + +AIY+
Sbjct: 609 SSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAM------ 662
Query: 672 KLYLTFTELKQLDEI 686
L+ +L ++DEI
Sbjct: 663 -LHFVTKDLSEIDEI 676
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 7/257 (2%)
Query: 275 LKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSL 334
+KCLK G H +K+ S+ +V+ Y K G +R A +V+ + ++ ++ +++
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAV 60
Query: 335 IAGYSSKGNMTKAKRLFDSLS-ERNYVVWTALCSGYVKSQQCEA-VFKLFREFRTTEA-- 390
IA Y N+ +A+ LF+S + ER+ + + L SG+ K+ CE+ ++F E E
Sbjct: 61 IAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD 120
Query: 391 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 450
+ D + ++ A + G+Q H +++T + + S+L+ MYSKCG
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 451 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 510
F D + N MIA Y G +KA+ +F +++ D I++ L++
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELN---DTISWNTLIAGYAQ 237
Query: 511 RGLVELGEKFFMSMKED 527
G E K +SM+E+
Sbjct: 238 NGYEEEALKMAVSMEEN 254
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/672 (36%), Positives = 374/672 (55%), Gaps = 46/672 (6%)
Query: 9 ALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMA 68
A+ V H IKSG ++ IF N+LI YS G L++ ++FDKMP RN ++WN+++
Sbjct: 36 AIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTG 95
Query: 69 YIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDE 128
K L +A +LF S RD ++NSM+S +A D C+ AL FA M ++ ++E
Sbjct: 96 LTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE-ALCYFAMMH--KEGFVLNE 152
Query: 129 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG 188
+ ++L+ + L + G Q+HS + K+ + S+L+DMYSKCG+ +A VF
Sbjct: 153 YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF-- 210
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 248
D + D + VSWN+LI + QNG AL
Sbjct: 211 -DEMGD------------------------------RNVVSWNSLITCFEQNGPAVEALD 239
Query: 249 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV-SSGIVDFY 307
+F M+E +E ++ TLASV+SAC L +K+G+ VH V+KND N + S+ VD Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 308 CKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCS 367
KC ++ A ++ + I++ A +S+I+GY+ + A+ +F ++ERN V W AL +
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 368 GYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN 427
GY ++ + E LF + E++ P N+L ACA A L LG Q H ++L+
Sbjct: 360 GYTQNGENEEALSLFCLLKR-ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 428 M------DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 481
D + ++L+DMY KCG + F+ + + RD + +N MI G+A +G+ N+
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME--RDCVSWNAMIIGFAQNGYGNE 476
Query: 482 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 541
A++LF+EML+ KPD IT + +LSAC H G VE G +F SM D+ V P HY CMV
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 536
Query: 542 DMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 601
D+ GR LE+A + ++P+Q D+ IWG+ L ACK++ N TL K E+LL+VE N
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSG 596
Query: 602 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADA 661
YV L+N+YA GKW ++ +RK MR + TK PGCSWI ++ HVF D SH +
Sbjct: 597 PYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQ 656
Query: 662 IYSTLVCLYGKL 673
I+S L L ++
Sbjct: 657 IHSLLDILIAEM 668
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/661 (36%), Positives = 372/661 (56%), Gaps = 10/661 (1%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H + IKSGL S++ N L+++YS G A KLFD+MP R AFSWN ++ AY K ++
Sbjct: 37 HCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM 96
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
FD RD VS+ +M+ Y G A+ + M ++ I + TLT +L
Sbjct: 97 DSTCEFFDQLPQRDSVSWTTMIVGYKNI-GQYHKAIRVMGDM--VKEGIEPTQFTLTNVL 153
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
A R + GK++HS++VK + +SL++MY+KCG A VF V D+
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM-VVRDI 212
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
S NAM+A + G+MD+A+ F + E D V+WN++I+G+ Q GY RAL +F +M+
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAE-RDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 256 KGI-EYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
+ ++ TLASVLSAC L+ L +GK +H+ ++ + V + ++ Y +CG +
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 315 YAESVYAGIGIKS--PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
A + G K ++L+ GY G+M +AK +F SL +R+ V WTA+ GY +
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
LFR P++ + +L + A+LS GKQ H +++ +
Sbjct: 392 GSYGEAINLFRSM-VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 450
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
++AL+ MY+K GNI A ++F L+ +RD + + MI A HG +A++LF+ ML
Sbjct: 451 SNALITMYAKAGNITSASRAFDLIR-CERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
L+PD IT+V + SAC H GLV G ++F MK+ ++P + HYACMVD++GR L++
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 553 AVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 612
A EF+ K+PI+ D WG+ L+AC+++ N L K A E LL +E +N Y LAN+Y+A
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSA 629
Query: 613 EGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGK 672
GKW E +IRK M+ K G SWI V++ +HVF D +H + + IY T+ ++ +
Sbjct: 630 CGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDE 689
Query: 673 L 673
+
Sbjct: 690 I 690
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 139/283 (49%), Gaps = 39/283 (13%)
Query: 264 TLASVLSACTGLKCLKLGKC--------VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+L+++L CT L + K VH V+K+ + ++ + +++ Y K G +
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALH 67
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
A ++ + +++ F+ +++++ YS +G+M FD L +R+ V WT + GY Q
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQY 127
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
++ + E + P + NVL + A + GK+ H++I++ L + ++++
Sbjct: 128 HKAIRVMGDM-VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNS 186
Query: 436 LVDMYSKCGNIAYAEKSF-----------------------------QLVTDSDRDVILY 466
L++MY+KCG+ A+ F Q ++RD++ +
Sbjct: 187 LLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTW 246
Query: 467 NVMIAGYAHHGFENKAIQLFQEMLKIS-LKPDAITFVALLSAC 508
N MI+G+ G++ +A+ +F +ML+ S L PD T ++LSAC
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 206/660 (31%), Positives = 348/660 (52%), Gaps = 43/660 (6%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H I++ F N ++H Y++ A ++FD++P N FSWN +++AY KA +
Sbjct: 29 HGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLI 88
Query: 76 TQARALFDSASHRDLVSYNSMLSAYA--GADGCDTVALDLFARMQSARDTIGMDEITLTT 133
++ + F+ RD V++N ++ Y+ G G A + R SA T +TL T
Sbjct: 89 SEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT----RVTLMT 144
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
ML LS+ V GKQ+H ++K + S L+ MY+ G +A VF G D
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR- 203
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
+ V N+++ G ++ AL +F + E D+VSW +I G QNG + A+ F EM
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLF-RGME-KDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
+G++ +Q+ SVL AC GL + GK +HA +++ + + +V S ++D YCKC +
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
YA++V FD + ++N V WTA+ GY ++
Sbjct: 322 HYAKTV-------------------------------FDRMKQKNVVSWTAMVVGYGQTG 350
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
+ E K+F + + + + PD + + ACA ++L G Q H + + L ++
Sbjct: 351 RAEEAVKIFLDMQRS-GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
++LV +Y KCG+I + + F + + RD + + M++ YA G + IQLF +M++
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEM--NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 494 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
LKPD +T ++SAC GLVE G+++F M +Y ++P I HY+CM+D++ R +LE+A
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEA 527
Query: 554 VEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAE 613
+ F+ +P DA W L+AC+ N + K A E L++++ + + Y L+++YA++
Sbjct: 528 MRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASK 587
Query: 614 GKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL 673
GKW+ + ++R+ MR K K PG SWI + +H F++ D S D IY+ L L K+
Sbjct: 588 GKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKI 647
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 128/305 (41%), Gaps = 37/305 (12%)
Query: 276 KCLKLG--------KCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
+C+ LG K +H +++ F+ + IV Y + YA V+ I +
Sbjct: 12 QCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPN 71
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 387
F+ ++L+ YS G +++ + F+ L +R+ V W L GY S A K +
Sbjct: 72 LFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Query: 388 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 447
+ + ++ +L + +SLGKQ H +++ + S L+ MY+ G I+
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS 191
Query: 448 YAEKSF----------------------------QLVTDSDRDVILYNVMIAGYAHHGFE 479
A+K F QL ++D + + MI G A +G
Sbjct: 192 DAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLA 251
Query: 480 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 539
+AI+ F+EM LK D F ++L AC G + G++ + N IY +
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGSA 310
Query: 540 MVDMY 544
++DMY
Sbjct: 311 LIDMY 315
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 355 bits (912), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 332/638 (52%), Gaps = 61/638 (9%)
Query: 32 NQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLV 91
N +I Y +G + A KLFD+MP R+ SWN +I Y++ NL +AR LF+ RD+
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 92 SYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNL---SAKLRVVCYGK 148
S+N+MLS YA +GC A +F RM D ++ +L+ ++K+ C
Sbjct: 159 SWNTMLSGYA-QNGCVDDARSVFDRMPEKND------VSWNALLSAYVQNSKMEEACM-- 209
Query: 149 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRD 208
+ K+ + + + + L+ + K EA F + V D+VS N ++ +
Sbjct: 210 -----LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN-VRDVVSWNTIITGYAQS 263
Query: 209 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 268
GK+D A +F ++P D +W +++GY+QN +E A LF +M E+
Sbjct: 264 GKIDEARQLFDESP-VQDVFTWTAMVSGYIQNRMVEEARELFDKMPER------------ 310
Query: 269 LSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 328
N+ + ++ Y + M A+ ++ + ++
Sbjct: 311 ---------------------------NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV 343
Query: 329 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 388
+++I GY+ G +++AK LFD + +R+ V W A+ +GY +S +LF +
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE 403
Query: 389 EALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAY 448
+ + + L CA L LGKQ H +++ + +AL+ MY KCG+I
Sbjct: 404 GGRL-NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 449 AEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 508
A F+ + + +D++ +N MIAGY+ HGF A++ F+ M + LKPD T VA+LSAC
Sbjct: 463 ANDLFKEM--AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 509 RHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATI 568
H GLV+ G ++F +M +DY V+P HYACMVD+ GR LE A M+ +P + DA I
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580
Query: 569 WGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRG 628
WG L A +++ NT L + A +++ +E +N YV L+N+YA+ G+W ++G++R MR
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 629 KEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
K K+PG SWI ++N H F+ GD H + D I++ L
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL 678
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 355 bits (910), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 220/689 (31%), Positives = 363/689 (52%), Gaps = 80/689 (11%)
Query: 9 ALVVYRDHVQAIKSGLASSIF-----TCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWN 63
AL +++ +Q + +G++ SI+ +C L L + G L AH L ++ F+ +
Sbjct: 265 ALKFFKE-MQKVNAGVSQSIYASVLRSCAALSEL-RLGGQLH-AHAL------KSDFAAD 315
Query: 64 AIIMA-----YIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQ 118
I+ Y K N+ A+ LFD++ + + SYN+M++ Y+ + AL LF R+
Sbjct: 316 GIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEH-GFKALLLFHRLM 374
Query: 119 SARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGS 178
S+ +G DEI+L+ + A ++ + G Q++ +K++ L ++ IDMY KC +
Sbjct: 375 SS--GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 179 FREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV 238
EA+ VF D + + D VSWN +IA +
Sbjct: 433 LAEAFRVF-------DEMRRR--------------------------DAVSWNAIIAAHE 459
Query: 239 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 298
QNG L LF+ M+ IE ++ T S+L ACTG L G +H+ ++K+ SN
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSS 518
Query: 299 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 358
V ++D Y KCG + AE ++ S + G M + +++ + +
Sbjct: 519 VGCSLIDMYSKCGMIEEAEKIH-----------SRFFQRANVSGTMEELEKMHNKRLQEM 567
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTE-ALIPDTMIIVNVLGACAIQATLSLGKQT 417
V W ++ SGYV +Q E LF R E + PD VL CA A+ LGKQ
Sbjct: 568 CVSWNSIISGYVMKEQSEDAQMLFT--RMMEMGITPDKFTYATVLDTCANLASAGLGKQI 625
Query: 418 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 477
HA +++ +L D + S LVDMYSKCG++ + F+ RD + +N MI GYAHHG
Sbjct: 626 HAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFE--KSLRRDFVTWNAMICGYAHHG 683
Query: 478 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 537
+AIQLF+ M+ ++KP+ +TF+++L AC H GL++ G ++F MK DY + P++ HY
Sbjct: 684 KGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY 743
Query: 538 ACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKIN-NNTTLVKQAEEELLKVE 596
+ MVD+ G+ ++++A+E +R++P + D IW L C I+ NN + ++A LL+++
Sbjct: 744 SNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLD 803
Query: 597 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSH 656
+ S Y L+NVYA G W ++ +R+ MRG + K PGCSW+ +++ +HVF GD +H
Sbjct: 804 PQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAH 863
Query: 657 SKADAIYSTLVCLYGKLYLTFTELKQLDE 685
+ + IY +L L ++E+K D+
Sbjct: 864 PRWEEIYE-------ELGLIYSEMKPFDD 885
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 230/493 (46%), Gaps = 70/493 (14%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H I SG + F N L+ +Y+ A +FDKMP R+ SWN +I Y K++++
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+A + F+ RD+VS+NSMLS Y +G ++++F M R+ I D T +L
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYL-QNGESLKSIEVFVDM--GREGIEFDGRTFAIIL 187
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + L G Q+H +V+ D A S+L+DMY+K F E+ VF G +
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG------I 241
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
KN++ SW+ +IAG VQN + AL F EM +
Sbjct: 242 PEKNSV---------------------------SWSAIIAGCVQNNLLSLALKFFKEMQK 274
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+Q ASVL +C L L+LG +HA LK+D ++ V + +D Y KC NM+
Sbjct: 275 VNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQ- 333
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
A+ LFD+ N + A+ +GY + +
Sbjct: 334 ------------------------------DAQILFDNSENLNRQSYNAMITGYSQEEHG 363
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
LF ++ L D + + V ACA+ LS G Q + +++ L++D +A+A
Sbjct: 364 FKALLLFHRLMSS-GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 422
Query: 436 LVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
+DMY KC +A A + F + RD + +N +IA + +G + + LF ML+ ++
Sbjct: 423 AIDMYGKCQALAEAFRVFDEM--RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE 480
Query: 496 PDAITFVALLSAC 508
PD TF ++L AC
Sbjct: 481 PDEFTFGSILKAC 493
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 220/445 (49%), Gaps = 46/445 (10%)
Query: 139 AKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSK 198
AK + GKQ H++M+ + + F L+ L+ +Y+ F A VF + D+VS
Sbjct: 59 AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP-LRDVVSW 117
Query: 199 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 258
N M+ + M A N F+ D VSWN++++GY+QNG +++ +F++M +GI
Sbjct: 118 NKMINGYSKSNDMFKA-NSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 176
Query: 259 EYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV-SSGIVDFYCKCGNMRYAE 317
E++ T A +L C+ L+ LG +H +V++ GC V +S ++D Y K R+ E
Sbjct: 177 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV-GCDTDVVAASALLDMYAK--GKRFVE 233
Query: 318 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 377
S+ R+F + E+N V W+A+ +G V++
Sbjct: 234 SL-----------------------------RVFQGIPEKNSVSWSAIIAGCVQNNLLSL 264
Query: 378 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 437
K F+E + A + + I +VL +CA + L LG Q HA+ L++ D + +A +
Sbjct: 265 ALKFFKEMQKVNAGVSQS-IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 323
Query: 438 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH--HGFENKAIQLFQEMLKISLK 495
DMY+KC N+ A+ F + +R YN MI GY+ HGF KA+ LF ++ L
Sbjct: 324 DMYAKCDNMQDAQILFDNSENLNRQS--YNAMITGYSQEEHGF--KALLLFHRLMSSGLG 379
Query: 496 PDAITFVALLSACRH-RGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 554
D I+ + AC +GL E + + +++K ++ + + A +DMYG+ L +A
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAF 437
Query: 555 EFMRKIPIQIDATIWGAFLNACKIN 579
++ + DA W A + A + N
Sbjct: 438 RVFDEMR-RRDAVSWNAIIAAHEQN 461
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 136/287 (47%), Gaps = 6/287 (2%)
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
V C L+LGK HA ++ + FV + ++ Y + A V+ + ++
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 387
+ + +I GYS +M KA F+ + R+ V W ++ SGY+++ + ++F +
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM-G 172
Query: 388 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 447
E + D +L C+ SLG Q H ++R + D ASAL+DMY+K
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 448 YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 507
+ + FQ + +++ + ++ +IAG + + A++ F+EM K++ + ++L +
Sbjct: 233 ESLRVFQGIP--EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 508 CRHRGLVELGEKFFM-SMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
C + LG + ++K D+ I A + DMY + + ++ A
Sbjct: 291 CAALSELRLGGQLHAHALKSDF-AADGIVRTATL-DMYAKCDNMQDA 335
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 224/660 (33%), Positives = 329/660 (49%), Gaps = 72/660 (10%)
Query: 1 MKSLIVRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAF 60
+KS+ RD H +KS +ASS + N ++LYS G L A F N F
Sbjct: 16 LKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVF 75
Query: 61 SWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDT-VALDLFARMQS 119
S+N I+ AY K + AR LFD D VSYN+++S YA D +T A+ LF RM+
Sbjct: 76 SYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYA--DARETFAAMVLFKRMR- 132
Query: 120 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 179
+ +D TL+ ++ +A V KQ+H + V D ++ + YSK G
Sbjct: 133 -KLGFEVDGFTLSGLI--AACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 180 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 239
REA +VF G MD E D VSWN++I Y Q
Sbjct: 190 REAVSVFYG----------------------MD----------ELRDEVSWNSMIVAYGQ 217
Query: 240 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 299
+ +AL L+ EMI KG + + TLASVL+A T L L G+ H ++K N V
Sbjct: 218 HKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV 277
Query: 300 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 359
SG++DFY KCG M ++++F + +
Sbjct: 278 GSGLIDFYSKCGGC----------------------------DGMYDSEKVFQEILSPDL 309
Query: 360 VVWTALCSGYVKSQQ-CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
VVW + SGY +++ E K FR+ + PD V V AC+ ++ S KQ H
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 419 AYILRTKLNMDE-KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 477
+++ + + + +AL+ +Y K GN+ A F + + + + +N MI GYA HG
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE--LNAVSFNCMIKGYAQHG 426
Query: 478 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 537
+A+ L+Q ML + P+ ITFVA+LSAC H G V+ G+++F +MKE + + PE HY
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486
Query: 538 ACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEA 597
+CM+D+ GR +LE+A F+ +P + + W A L AC+ + N L ++A EL+ ++
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQP 546
Query: 598 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 657
+ YV LAN+YA KW EM +RK MRGK K PGCSWI V+ HVF + D SH
Sbjct: 547 LAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 342 bits (877), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 207/648 (31%), Positives = 333/648 (51%), Gaps = 77/648 (11%)
Query: 24 LASSIFTC--NQLIHLYSIHGLLQ-EAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARA 80
+ S F+C L S+HG Q L RN+ N+++ Y+K + AR
Sbjct: 193 MDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARK 251
Query: 81 LFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAK 140
+FD + RD++S+NS+++ Y ++G L +F +M + I +D T+ ++ A
Sbjct: 252 VFDEMTERDVISWNSIINGYV-SNGLAEKGLSVFVQMLVS--GIEIDLATIVSVFAGCAD 308
Query: 141 LRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNA 200
R++ G+ +HS VK ++L+DMYSKCG A VF
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR------------- 355
Query: 201 MVAACCRDGKMDMALNVFWKNPEFND--TVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 258
E +D VS+ ++IAGY + G A+ LF EM E+GI
Sbjct: 356 ----------------------EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 259 EYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAES 318
+ +T+ +VL+ C + L GK VH + +ND + FVS+ ++D Y KCG+M+ AE
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 319 VYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAV 378
V++ + +K + +++I GYS +A LF+ L E
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEE--------------------- 492
Query: 379 FKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVD 438
+ PD + VL ACA + G++ H YI+R D +A++LVD
Sbjct: 493 ----------KRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 542
Query: 439 MYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDA 498
MY+KCG + A F + + +D++ + VMIAGY HGF +AI LF +M + ++ D
Sbjct: 543 MYAKCGALLLAHMLFDDI--ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADE 600
Query: 499 ITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMR 558
I+FV+LL AC H GLV+ G +FF M+ + + P + HYAC+VDM R L KA F+
Sbjct: 601 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660
Query: 559 KIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNE 618
+PI DATIWGA L C+I+++ L ++ E++ ++E +N YV +AN+YA KW +
Sbjct: 661 NMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQ 720
Query: 619 MGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
+ R+RK + + K PGCSWI ++ +++F +GD+S+ + + I + L
Sbjct: 721 VKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFL 768
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 222/507 (43%), Gaps = 76/507 (14%)
Query: 88 RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYG 147
R + N+ L + C++ L+ ++ +D TL ++L L A + + G
Sbjct: 59 RSVTDANTQLRRF-----CESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDG 113
Query: 148 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCR 207
K++ +++ + S L MY+ CG +EA VF
Sbjct: 114 KEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD-------------------- 153
Query: 208 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 267
+ K++ AL WN L+ ++G ++ LF +M+ G+E + +T +
Sbjct: 154 EVKIEKAL-------------FWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSC 200
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
V + + L+ + G+ +H +LK+ V + +V FY K + A V+ + +
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD 260
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 387
+ +S+I GY S G K +F + L SG
Sbjct: 261 VISWNSIINGYVSNGLAEKGLSVFVQM----------LVSG------------------- 291
Query: 388 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 447
+ D IV+V CA +SLG+ H+ ++ + +++ + L+DMYSKCG++
Sbjct: 292 ---IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 448 YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 507
A+ F+ + SDR V+ Y MIAGYA G +A++LF+EM + + PD T A+L+
Sbjct: 349 SAKAVFREM--SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 508 CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA---VEFMRKIPIQI 564
C L++ G++ +KE+ ++ +I+ ++DMY + +++A MR I
Sbjct: 407 CARYRLLDEGKRVHEWIKEN-DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 465
Query: 565 DATIWGAFLNACKINNNTTLVKQAEEE 591
TI G + C N +L EE
Sbjct: 466 WNTIIGGYSKNCYANEALSLFNLLLEE 492
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 341 bits (875), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 213/626 (34%), Positives = 321/626 (51%), Gaps = 54/626 (8%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
N F NA++ Y + +L+ AR +FD S D+VS+NS++ +YA G VAL++F+RM
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL-GKPKVALEMFSRM 219
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
+ D ITL +L A L GKQ+H + V + + F + L+DMY+KCG
Sbjct: 220 TNEFGC-RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 278
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLI 234
EA VFS V D+VS NAMVA + G+ + A+ +F K E D V+W+ I
Sbjct: 279 MMDEANTVFSNMS-VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 235 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK---- 290
+GY Q G AL + +M+ GI+ N+ TL SVLS C + L GK +H +K
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 291 ---NDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKA 347
N V + ++D Y KC + A
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKV-------------------------------DTA 426
Query: 348 KRLFDSLS--ERNYVVWTALCSGYVKSQQCEAVFKLFRE-FRTTEALIPDTMIIVNVLGA 404
+ +FDSLS ER+ V WT + GY + +L E F P+ I L A
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 405 CAIQATLSLGKQTHAYILRTKLNMDEKLAS-ALVDMYSKCGNIAYAEKSFQLVTDS--DR 461
CA A L +GKQ HAY LR + N S L+DMY+KCG+I+ A +LV D+ +
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA----RLVFDNMMAK 542
Query: 462 DVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF 521
+ + + ++ GY HG+ +A+ +F EM +I K D +T + +L AC H G+++ G ++F
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 522 MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNN 581
MK + V P HYAC+VD+ GR +L A+ + ++P++ +W AFL+ C+I+
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Query: 582 TTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIY 641
L + A E++ ++ +++ Y L+N+YA G+W ++ RIR MR K K PGCSW+
Sbjct: 663 VELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Query: 642 VENGIHVFTSGDTSHSKADAIYSTLV 667
G F GD +H A IY L+
Sbjct: 723 GIKGTTTFFVGDKTHPHAKEIYQVLL 748
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 157/631 (24%), Positives = 274/631 (43%), Gaps = 99/631 (15%)
Query: 65 IIMAYIKAHNLTQARALFDSASHRD--LVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
+I YI L+ A +L D + +NS++ +Y G +GC L LF M S
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY-GDNGCANKCLYLFGLMHSLSW 123
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
T D T + ++ V G+ H+ + T + F ++L+ MYS+C S +A
Sbjct: 124 T--PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
VF V D+VS N+++ + + GK +AL +F +
Sbjct: 182 RKVFDEMS-VWDVVSWNSIIESYAKLGKPKVALEMFSRMTN------------------- 221
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
E G + TL +VL C L LGK +H + ++ N FV +
Sbjct: 222 ------------EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----N 358
+VD Y KCG M A +V++ + +K + ++++AGYS G A RLF+ + E +
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
V W+A SGY + + R+ ++ + P+ + +++VL CA L GK+ H
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 419 AYILRTKLNM------DEKLA-SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 471
Y ++ +++ DE + + L+DMY+KC + A F ++ +RDV+ + VMI
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 472 GYAHHGFENKAIQLFQEMLK--ISLKPDAITFVALLSACRHRGLVELGEKFFM-SMKEDY 528
GY+ HG NKA++L EM + +P+A T L AC + +G++ +++
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 529 NVLPEIYHYACMVDMY----------------------------------GRGNQLEKAV 554
N +P ++ C++DMY G G +
Sbjct: 509 NAVP-LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIF 567
Query: 555 EFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNG-----SRYVQLANV 609
+ MR+I ++D L AC +++ ++ Q E +++ G Y L ++
Sbjct: 568 DEMRRIGFKLDGVTLLVVLYAC---SHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDL 624
Query: 610 YAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 640
G+ N R+ +EM + P W+
Sbjct: 625 LGRAGRLNAALRLIEEM----PMEPPPVVWV 651
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 222/521 (42%), Gaps = 123/521 (23%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H A+ S + ++F N L+ +Y+ G++ EA+ +F M ++ SWNA++ Y +
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRF 311
Query: 76 TQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITL 131
A LF+ D+V++++ +S YA G AL + +M S+ I +E+TL
Sbjct: 312 EDAVRLFEKMQEEKIKMDVVTWSAAISGYA-QRGLGYEALGVCRQMLSS--GIKPNEVTL 368
Query: 132 TTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK-------FALSSLIDMYSKCGSFREAYN 184
++L+ A + + +GK++H Y +K DL K ++ LIDMY+KC A
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 244
+F +P+ D V+W +I GY Q+G
Sbjct: 429 MFDSL-------------------------------SPKERDVVTWTVMIGGYSQHGDAN 457
Query: 245 RALTLFIEMIEKGIEY--NQHTLASVLSACTGLKCLKLGKCVHALVLKN-DGCSNQFVSS 301
+AL L EM E+ + N T++ L AC L L++GK +HA L+N FVS+
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 302 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 361
++D Y KCG++ A V+ + K+ +SL+ GY G +A +FD +
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG--- 574
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
FKL D + ++ VL AC+ + G + Y
Sbjct: 575 -----------------FKL------------DGVTLLVVLYACSHSGMIDQGME---YF 602
Query: 422 LRTK----LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 477
R K ++ + + LVD+ + G +
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRL------------------------------- 631
Query: 478 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 518
N A++L +EM ++P + +VA LS CR G VELGE
Sbjct: 632 --NAALRLIEEM---PMEPPPVVWVAFLSCCRIHGKVELGE 667
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 152/324 (46%), Gaps = 34/324 (10%)
Query: 191 GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTV-SWNTLIAGYVQNGYMERALTL 249
G++ L + +++ G + A+++ + P + V WN+LI Y NG + L L
Sbjct: 55 GILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYL 114
Query: 250 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 309
F M + +T V AC + ++ G+ HAL L SN FV + +V Y +
Sbjct: 115 FGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR 174
Query: 310 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 369
C +++ A+++FD +S + V W ++ Y
Sbjct: 175 C-------------------------------RSLSDARKVFDEMSVWDVVSWNSIIESY 203
Query: 370 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 429
K + + ++F PD + +VNVL CA T SLGKQ H + + +++ +
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN 263
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 489
+ + LVDMY+KCG + A F + S +DV+ +N M+AGY+ G A++LF++M
Sbjct: 264 MFVGNCLVDMYAKCGMMDEANTVFSNM--SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 490 LKISLKPDAITFVALLSACRHRGL 513
+ +K D +T+ A +S RGL
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGL 345
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/611 (31%), Positives = 333/611 (54%), Gaps = 12/611 (1%)
Query: 29 FTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHR 88
F+ N +I Y G + + FD MP R+ +SWN ++ + KA L+ AR LF++ +
Sbjct: 94 FSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEK 153
Query: 89 DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGK 148
D+V+ NS+L Y +G AL LF + D ITLTT+L A+L + GK
Sbjct: 154 DVVTLNSLLHGYI-LNGYAEEALRLFKELN-----FSADAITLTTVLKACAELEALKCGK 207
Query: 149 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRD 208
Q+H+ ++ + SSL+++Y+KCG R A + D S +A+++
Sbjct: 208 QIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDH-SLSALISGYANC 266
Query: 209 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 268
G+++ + +F + + WN++I+GY+ N AL LF EM + E + TLA+V
Sbjct: 267 GRVNESRGLFDRKSN-RCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAV 324
Query: 269 LSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 328
++AC GL L+ GK +H K + V+S ++D Y KCG+ A +++ +
Sbjct: 325 INACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDT 384
Query: 329 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 388
+S+I Y S G + AKR+F+ + ++ + W ++ +G+ ++ + F +
Sbjct: 385 ILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKL 444
Query: 389 EALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAY 448
+ L D + + +V+ ACA ++L LG+Q A L+ D+ ++S+L+D+Y KCG + +
Sbjct: 445 D-LPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEH 503
Query: 449 AEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 508
+ F + SD + +N MI+GYA +G +AI LF++M ++P ITF+ +L+AC
Sbjct: 504 GRRVFDTMVKSDE--VPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTAC 561
Query: 509 RHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATI 568
+ GLVE G K F SMK D+ +P+ H++CMVD+ R +E+A+ + ++P +D ++
Sbjct: 562 NYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSM 621
Query: 569 WGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRG 628
W + L C N + K+A E+++++E +N YVQL+ ++A G W +RK MR
Sbjct: 622 WSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRE 681
Query: 629 KEATKLPGCSW 639
TK PG SW
Sbjct: 682 NNVTKNPGSSW 692
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 191/388 (49%), Gaps = 20/388 (5%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H Q + G+ + L+++Y+ G L+ A + +++ + S +A+I Y +
Sbjct: 210 HAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRV 269
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
++R LFD S+R ++ +NSM+S Y A+ AL LF M R+ D TL ++
Sbjct: 270 NESRGLFDRKSNRCVILWNSMISGYI-ANNMKMEALVLFNEM---RNETREDSRTLAAVI 325
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
N L + GKQMH + K S+L+DMYSKCGS EA +FS + D
Sbjct: 326 NACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVES-YDT 384
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+ N+M+ G++D A VF + E +SWN++ G+ QNG L F +M +
Sbjct: 385 ILLNSMIKVYFSCGRIDDAKRVF-ERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHK 443
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+ ++ +L+SV+SAC + L+LG+ V A S+Q VSS ++D YCKCG + +
Sbjct: 444 LDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEH 503
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS-------ERNYVVWTALCS- 367
V+ + +S+I+GY++ G +A LF +S + ++V C+
Sbjct: 504 GRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNY 563
Query: 368 -GYVKSQQCEAVFKLFREFRTTEALIPD 394
G V+ + KLF + +PD
Sbjct: 564 CGLVEEGR-----KLFESMKVDHGFVPD 586
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 157/342 (45%), Gaps = 60/342 (17%)
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSN-QFVSSGIVDFYCKCGNMRYAESVYAGIGIK 326
+L +C+ L + + L+LK S+ V++ ++ Y + G M A +++ + +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 327 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLF---- 382
+ F+ +++I GY + G + R FD + ER+ W + SG+ K+ + +LF
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 383 -REFRTTEALI----------------------PDTMIIVNVLGACAIQATLSLGKQTHA 419
++ T +L+ D + + VL ACA L GKQ HA
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHA 211
Query: 420 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD------------------- 460
IL + D K+ S+LV++Y+KCG++ A + + + D
Sbjct: 212 QILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNE 271
Query: 461 ----------RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 510
R VIL+N MI+GY + + +A+ LF EM + + D+ T A+++AC
Sbjct: 272 SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIG 330
Query: 511 RGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR-GNQLE 551
G +E G++ + + ++ +I + ++DMY + G+ +E
Sbjct: 331 LGFLETGKQMHCHACK-FGLIDDIVVASTLLDMYSKCGSPME 371
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 399 VNVLGACAIQATLSLGKQTHAYILRTK-LNMDEKLASALVDMYSKCGNIAYAEKSFQLVT 457
V +L +C+ + +L +QT+ +L+ L+ +A+ L+ MYS+ G + A F +
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMP 89
Query: 458 DSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG 517
D R+ +N MI GY + G + +++ F M + D ++ ++S G + +
Sbjct: 90 D--RNYFSWNTMIEGYMNSGEKGTSLRFFDMM----PERDGYSWNVVVSGFAKAGELSVA 143
Query: 518 EKFFMSMKE-DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNAC 576
+ F +M E D L + H +++ Y E+A+ +++ DA L AC
Sbjct: 144 RRLFNAMPEKDVVTLNSLLH-GYILNGYA-----EEALRLFKELNFSADAITLTTVLKAC 197
Query: 577 KINNNTTLVKQAEEELL--KVEADNGSRYVQLANVYAAEG 614
KQ ++L VE D+ L NVYA G
Sbjct: 198 AELEALKCGKQIHAQILIGGVECDSKMN-SSLVNVYAKCG 236
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 336 bits (861), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 300/539 (55%), Gaps = 7/539 (1%)
Query: 131 LTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS-LIDMYSKCGSFREAYNVFSGC 189
L ++L + + GK +H ++ T LS+ LI MY KCG +A VF
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 190 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 249
+ +L S N MV+ + G + A VF PE D VSWNT++ GY Q+G + AL
Sbjct: 109 H-LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPE-RDVVSWNTMVIGYAQDGNLHEALWF 166
Query: 250 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 309
+ E GI++N+ + A +L+AC + L+L + H VL SN +S I+D Y K
Sbjct: 167 YKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK 226
Query: 310 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 369
CG M A+ + + +K ++LI+GY+ G+M A++LF + E+N V WTAL +GY
Sbjct: 227 CGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 370 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 429
V+ LFR+ + P+ + L A A A+L GK+ H Y++RT + +
Sbjct: 287 VRQGSGNRALDLFRKM-IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPN 345
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 489
+ S+L+DMYSK G++ +E+ F+ + D D + +N MI+ A HG +KA+++ +M
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFR-ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
Query: 490 LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQ 549
+K ++P+ T V +L+AC H GLVE G ++F SM + ++P+ HYAC++D+ GR
Sbjct: 405 IKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGC 464
Query: 550 LEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANV 609
++ + + ++P + D IW A L C+I+ N L K+A +EL+K++ ++ + Y+ L+++
Sbjct: 465 FKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSI 524
Query: 610 YAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKA--DAIYSTL 666
YA GKW + ++R M+ + K SWI +E + FT D SH+ A + IY L
Sbjct: 525 YADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFIL 583
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 230/499 (46%), Gaps = 45/499 (9%)
Query: 32 NQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLV 91
N LI +Y G +A K+FD+M RN +SWN ++ Y+K+ L +AR +FDS RD+V
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 92 SYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMH 151
S+N+M+ YA DG AL + + R I +E + +L K R + +Q H
Sbjct: 146 SWNTMVIGYA-QDGNLHEALWFYKEFR--RSGIKFNEFSFAGLLTACVKSRQLQLNRQAH 202
Query: 152 SYMVKTANDLSKFALS-SLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGK 210
V A LS LS S+ID Y+KCG A F V D+ +++ + G
Sbjct: 203 G-QVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT-VKDIHIWTTLISGYAKLGD 260
Query: 211 MDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLS 270
M+ A +F + PE N VSW LIAGYV+ G RAL LF +MI G++ Q T +S L
Sbjct: 261 MEAAEKLFCEMPEKN-PVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLC 319
Query: 271 ACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFA 330
A + L+ GK +H +++ + N V S ++D Y K G++ +E V+ K
Sbjct: 320 ASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCV 379
Query: 331 -TSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTE 389
+++I+ + G KA R+ D + +FR
Sbjct: 380 FWNTMISALAQHGLGHKALRMLDDMI----------------------------KFRVQ- 410
Query: 390 ALIPDTMIIVNVLGACAIQATLSLG-KQTHAYILRTKLNMDEKLASALVDMYSKCGNIA- 447
P+ +V +L AC+ + G + + ++ + D++ + L+D+ + G
Sbjct: 411 ---PNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 448 YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 507
K ++ + D+ + +N ++ HG E + E++K+ + A ++ L S
Sbjct: 468 LMRKIEEMPFEPDKHI--WNAILGVCRIHGNEELGKKAADELIKLDPESSA-PYILLSSI 524
Query: 508 CRHRGLVELGEKFFMSMKE 526
G EL EK MK+
Sbjct: 525 YADHGKWELVEKLRGVMKK 543
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 170/385 (44%), Gaps = 32/385 (8%)
Query: 221 NPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKL 280
NP + ++ + + +A++ + ++GI LAS+L C K LK
Sbjct: 5 NPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQ 64
Query: 281 GKCVHA-LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 339
GK +H L + N +S+ ++ Y KCG A V+ + +++ ++ +++++GY
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Query: 340 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 399
G + +A+ +FDS+ ER+ V W + GY + ++EFR + + +
Sbjct: 125 KSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS-GIKFNEFSFA 183
Query: 400 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 459
+L AC L L +Q H +L + L+ +++D Y+KCG + A++ F +T
Sbjct: 184 GLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK 243
Query: 460 D-----------------------------RDVILYNVMIAGYAHHGFENKAIQLFQEML 490
D ++ + + +IAGY G N+A+ LF++M+
Sbjct: 244 DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMI 303
Query: 491 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 550
+ +KP+ TF + L A + G++ M NV P + ++DMY + L
Sbjct: 304 ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSL 362
Query: 551 EKAVEFMRKIPIQIDATIWGAFLNA 575
E + R + D W ++A
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISA 387
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 35/258 (13%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H Q + +G S++ +I Y+ G ++ A + FD+M ++ W +I Y K ++
Sbjct: 202 HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDM 261
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A LF ++ VS+ ++++ Y G ALDLF +M + + ++ T ++ L
Sbjct: 262 EAAEKLFCEMPEKNPVSWTALIAGYV-RQGSGNRALDLFRKMIAL--GVKPEQFTFSSCL 318
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
SA + + +GK++H YM++T + +SSLIDMYSK GS + VF CD D
Sbjct: 319 CASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC 378
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
V WNT+I+ Q+G +AL + +MI+
Sbjct: 379 V--------------------------------FWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 256 KGIEYNQHTLASVLSACT 273
++ N+ TL +L+AC+
Sbjct: 407 FRVQPNRTTLVVILNACS 424
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/609 (31%), Positives = 322/609 (52%), Gaps = 46/609 (7%)
Query: 74 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT-IGMDEITLT 132
+L AR +FD + ++N+++ AYA G D V L ++A + ++ ++ T
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYAS--GPDPV-LSIWAFLDMVSESQCYPNKYTFP 135
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
++ +A++ + G+ +H VK+A F +SLI Y CG A VF+
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE- 194
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
D VSWN++I G+VQ G ++AL LF +
Sbjct: 195 --------------------------------KDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
M + ++ + T+ VLSAC ++ L+ G+ V + + +N N +++ ++D Y KCG+
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
+ A+ ++ + K ++++ GY+ + A+ + +S+ +++ V W AL S Y ++
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
+ +F E + + + + + +V+ L ACA L LG+ H+YI + + M+ +
Sbjct: 343 GKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHV 402
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
SAL+ MYSKCG++ + + F V RDV +++ MI G A HG N+A+ +F +M +
Sbjct: 403 TSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
++KP+ +TF + AC H GLV+ E F M+ +Y ++PE HYAC+VD+ GR LEK
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 553 AVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 612
AV+F+ +PI ++WGA L ACKI+ N L + A LL++E N +V L+N+YA
Sbjct: 521 AVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAK 580
Query: 613 EGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGK 672
GKW + +RK MR K PGCS I ++ IH F SGD +H ++ + YGK
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV-------YGK 633
Query: 673 LYLTFTELK 681
L+ +LK
Sbjct: 634 LHEVMEKLK 642
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 190/396 (47%), Gaps = 44/396 (11%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H A+KS + S +F N LIH Y G L A K+F + ++ SWN++I +++
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ---- 209
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
G AL+LF +M+S + + +T+ +L
Sbjct: 210 ----------------------------KGSPDKALELFKKMES--EDVKASHVTMVGVL 239
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ AK+R + +G+Q+ SY+ + +++ ++++DMY+KCGS +A +F + D
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE-KDN 298
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM-I 254
V+ M+ + A V P+ D V+WN LI+ Y QNG AL +F E+ +
Sbjct: 299 VTWTTMLDGYAISEDYEAAREVLNSMPQ-KDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
+K ++ NQ TL S LSAC + L+LG+ +H+ + K+ N V+S ++ Y KCG++
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLE 417
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY----VVWTALCSGYV 370
+ V+ + + F S++I G + G +A +F + E N V +T +
Sbjct: 418 KSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
Query: 371 KSQQCEAVFKLFREFRTTEALIPDT---MIIVNVLG 403
+ + LF + + ++P+ IV+VLG
Sbjct: 478 HTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLG 513
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/654 (28%), Positives = 338/654 (51%), Gaps = 45/654 (6%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H + +KSG + + +LI YS + +A + +P +S++++I A KA
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
TQ+ +F L+ D L +
Sbjct: 98 TQSIGVFSRMFSHGLIP----------------------------------DSHVLPNLF 123
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ A+L GKQ+H + D+ F S+ MY +CG +A VF D+
Sbjct: 124 KVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK-DV 182
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFIE 252
V+ +A++ A R G ++ + + + + VSWN +++G+ ++GY + A+ +F +
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
+ G +Q T++SVL + + L +G+ +H V+K ++ V S ++D Y K G+
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSG 368
+ S++ + ++ I G S G + KA +F+ E+ N V WT++ +G
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 428
++ + +LFRE + + P+ + I ++L AC A L G+ TH + +R L
Sbjct: 363 CAQNGKDIEALELFREMQVA-GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421
Query: 429 DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQE 488
+ + SAL+DMY+KCG I ++ F ++ ++++ +N ++ G++ HG + + +F+
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPT--KNLVCWNSLMNGFSMHGKAKEVMSIFES 479
Query: 489 MLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGN 548
+++ LKPD I+F +LLSAC GL + G K+F M E+Y + P + HY+CMV++ GR
Sbjct: 480 LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539
Query: 549 QLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLAN 608
+L++A + ++++P + D+ +WGA LN+C++ NN L + A E+L +E +N YV L+N
Sbjct: 540 KLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSN 599
Query: 609 VYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 662
+YAA+G W E+ IR +M K PGCSWI V+N ++ +GD SH + D I
Sbjct: 600 IYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQI 653
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 322/627 (51%), Gaps = 76/627 (12%)
Query: 40 IHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSA 99
IHGLL ++ D F+ + Y K + +AR +FD RDLVS+N++++
Sbjct: 157 IHGLLVKSGFSLD------LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAG 210
Query: 100 YAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAN 159
Y+ +G +AL++ M + + IT+ ++L + LR++ GK++H Y +++
Sbjct: 211 YS-QNGMARMALEMVKSM--CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF 267
Query: 160 DLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFW 219
D ++L+DMY+KCGS A +F G ++ +N
Sbjct: 268 DSLVNISTALVDMYAKCGSLETARQLFDG------MLERN-------------------- 301
Query: 220 KNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK 279
VSWN++I YVQN + A+ +F +M+++G++ ++ L AC L L+
Sbjct: 302 -------VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Query: 280 LGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 339
G+ +H L ++ N V + ++ YCKC + A S
Sbjct: 355 RGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS--------------------- 393
Query: 340 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 399
+F L R V W A+ G+ ++ + F + R+ + PDT V
Sbjct: 394 ----------MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS-RTVKPDTFTYV 442
Query: 400 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 459
+V+ A A + K H ++R+ L+ + + +ALVDMY+KCG I A F ++ S
Sbjct: 443 SVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM--S 500
Query: 460 DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 519
+R V +N MI GY HGF A++LF+EM K ++KP+ +TF++++SAC H GLVE G K
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 520 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKIN 579
F MKE+Y++ + HY MVD+ GR +L +A +F+ ++P++ ++GA L AC+I+
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Query: 580 NNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSW 639
N ++A E L ++ D+G +V LAN+Y A W ++G++R M + K PGCS
Sbjct: 621 KNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680
Query: 640 IYVENGIHVFTSGDTSHSKADAIYSTL 666
+ ++N +H F SG T+H + IY+ L
Sbjct: 681 VEIKNEVHSFFSGSTAHPDSKKIYAFL 707
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 143/353 (40%), Gaps = 111/353 (31%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H A++SG S + L+ +Y+ G L+ A +LFD M RN SWN++I AY++ N
Sbjct: 259 HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENP 318
Query: 76 TQARALFD---------------SASH------------------------RDLVSYNSM 96
+A +F A H R++ NS+
Sbjct: 319 KEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSL 378
Query: 97 LSAYAGADGCDTV------------------------------ALDLFARMQSARDTIGM 126
+S Y DT AL+ F++M+S T+
Sbjct: 379 ISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR--TVKP 436
Query: 127 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 186
D T +++ A+L + + K +H ++++ D + F ++L+DMY+KCG+ A +F
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 187 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 246
D++S+ +WN +I GY +G+ + A
Sbjct: 497 -------DMMSE--------------------------RHVTTWNAMIDGYGTHGFGKAA 523
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSACT-------GLKCLKLGKCVHALVLKND 292
L LF EM + I+ N T SV+SAC+ GLKC + K +++ L D
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/614 (31%), Positives = 322/614 (52%), Gaps = 78/614 (12%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N++I Y+K N+ +AR LFD + +V++NSM+S YA A+G D AL +F M+ +
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA-ANGLDLEALGMFYSMR--LN 289
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ + E + +++ L A L+ + + +Q+H +VK + ++L+ YSKC + +A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 183 YNVFS--GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 240
+F GC G + VSW +I+G++QN
Sbjct: 350 LRLFKEIGCVG----------------------------------NVVSWTAMISGFLQN 375
Query: 241 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 300
E A+ LF EM KG+ N+ T + +L+A + + VHA V+K + + V
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVG 431
Query: 301 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 360
+ ++D Y K G + +A ++F + +++ V
Sbjct: 432 TALLDAYVKLGKVE-------------------------------EAAKVFSGIDDKDIV 460
Query: 361 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA-IQATLSLGKQTHA 419
W+A+ +GY ++ + EA K+F E T + P+ ++L CA A++ GKQ H
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 420 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 479
+ ++++L+ ++SAL+ MY+K GNI AE+ F+ ++D++ +N MI+GYA HG
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK--RQREKDLVSWNSMISGYAQHGQA 577
Query: 480 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 539
KA+ +F+EM K +K D +TF+ + +AC H GLVE GEK+F M D + P H +C
Sbjct: 578 MKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC 637
Query: 540 MVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADN 599
MVD+Y R QLEKA++ + +P +TIW L AC+++ T L + A E+++ ++ ++
Sbjct: 638 MVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPED 697
Query: 600 GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKA 659
+ YV L+N+YA G W E ++RK M + K PG SWI V+N + F +GD SH
Sbjct: 698 SAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLK 757
Query: 660 DAIYSTLVCLYGKL 673
D IY L L +L
Sbjct: 758 DQIYMKLEDLSTRL 771
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 322 bits (824), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 201/661 (30%), Positives = 339/661 (51%), Gaps = 27/661 (4%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H I G N+LI +Y L A +LFD++ + + ++ Y + ++
Sbjct: 37 HGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDI 96
Query: 76 TQARALFDSAS--HRDLVSYNSMLSAYA-GADGCDTVALDLFARMQSARDTIGMDEITLT 132
T AR +F+ A RD V YN+M++ ++ DG A++LF +M+ + D T
Sbjct: 97 TLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYS--AINLFCKMK--HEGFKPDNFTFA 152
Query: 133 TMLNLSAKLRVVCYGK----QMHSYMVKTANDLSKFALSSLIDMYSKCGS----FREAYN 184
++L A L +V + Q H+ +K+ ++L+ +YSKC S A
Sbjct: 153 SVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 185 VFSGCDGVV--DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
VF D ++ D S M+ ++G D+ + + V++N +I+GYV G+
Sbjct: 210 VF---DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF 266
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
+ AL + M+ GIE ++ T SV+ AC L+LGK VHA VL+ + S F +S
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNS- 325
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
+V Y KCG A +++ + K + ++L++GY S G++ +AK +F + E+N + W
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSW 385
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
+ SG ++ E KLF + E P + +CA+ G+Q HA +L
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMKR-EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
+ + +AL+ MY+KCG + A + F+ T D + +N +IA HG +A
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFR--TMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 542
+ +++EMLK ++PD IT + +L+AC H GLV+ G K+F SM+ Y + P HYA ++D
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 543 MYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 602
+ R + A + +P + A IW A L+ C+++ N L A ++L + ++
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622
Query: 603 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 662
Y+ L+N++AA G+W E+ R+RK MR + K CSWI +E +H F DTSH +A+A+
Sbjct: 623 YMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAV 682
Query: 663 Y 663
Y
Sbjct: 683 Y 683
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 137/569 (24%), Positives = 241/569 (42%), Gaps = 93/569 (16%)
Query: 3 SLIVRDALVVYRDHVQAIKSGLASSIFTCNQLIHLY----SIHGLLQEAHKLFDKMPHRN 58
+L+ D + H A+KSG N L+ +Y S LL A K+FD++ ++
Sbjct: 159 ALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKD 218
Query: 59 AFSWNAIIMAYIKAHNLTQARALFDSA-SHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
SW ++ Y+K L + + LV+YN+M+S Y G AL++ RM
Sbjct: 219 ERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR-GFYQEALEMVRRM 277
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
S+ I +DE T +++ A ++ GKQ+H+Y+++ D S +SL+ +Y KCG
Sbjct: 278 VSS--GIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCG 334
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
F EA +F DLVS NA+++ G + A +F + E N +SW +I+G
Sbjct: 335 KFDEARAIFEKMPA-KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN-ILSWMIMISGL 392
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 297
+NG+ E L LF M +G E + + + +C L G+ HA +LK S+
Sbjct: 393 AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSL 452
Query: 298 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 357
+ ++ Y KCG + A V+ + + ++LIA G+ +A +++ + ++
Sbjct: 453 SAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKK 512
Query: 358 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ- 416
+ PD + ++ VL AC+ + G++
Sbjct: 513 --------------------------------GIRPDRITLLTVLTACSHAGLVDQGRKY 540
Query: 417 --THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 474
+ + R D + L+D+ + G + AE +
Sbjct: 541 FDSMETVYRIPPGADHY--ARLIDLLCRSGKFSDAESVIE-------------------- 578
Query: 475 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 534
+ KP A + ALLS CR G +ELG ++ + + ++PE
Sbjct: 579 ----------------SLPFKPTAEIWEALLSGCRVHGNMELG---IIAADKLFGLIPE- 618
Query: 535 YH---YACMVDMYGRGNQLEKAVEFMRKI 560
H Y + +M+ Q E+ V +RK+
Sbjct: 619 -HDGTYMLLSNMHAATGQWEE-VARVRKL 645
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 163/352 (46%), Gaps = 49/352 (13%)
Query: 266 ASVLSACTGLK--CLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 323
A+ L C L+ L+L + VH ++ + + ++D YCK + YA ++ I
Sbjct: 16 AANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEI 75
Query: 324 GIKSPFATSSLIAGYSSKGNMTKAKRLFD--SLSERNYVVWTALCSGYVKSQQCEAVFKL 381
A +++++GY + G++T A+ +F+ + R+ V++ A+ +G+ + + L
Sbjct: 76 SEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINL 135
Query: 382 FREFRTTEALIPDTMIIVNVLGACAIQATLSLG-KQTHAYILRTKLNMDEKLASALVDMY 440
F + + E PD +VL A+ A Q HA L++ +++ALV +Y
Sbjct: 136 FCKMK-HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 441 SKCGN----IAYAEKSFQLVTDSDR------------------------------DVILY 466
SKC + + A K F + + D ++ Y
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 467 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF--FMSM 524
N MI+GY + GF +A+++ + M+ ++ D T+ +++ AC GL++LG++ ++
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 525 KEDYNVLPEIYHYA-CMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
+ED++ +H+ +V +Y + + ++A K+P + D W A L+
Sbjct: 315 REDFS-----FHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 341/617 (55%), Gaps = 8/617 (1%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H + +KSGL S+ + CN ++++Y+ LL +A +F ++ S+N ++ Y+++ L
Sbjct: 64 HCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRL 123
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A LFD R VSY +++ YA + + A++LF M++ I ++E+TL T++
Sbjct: 124 WDALKLFDVMPERSCVSYTTLIKGYAQNNQW-SEAMELFREMRNL--GIMLNEVTLATVI 180
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + L + + + S +K + F ++L+ MY C ++A +F +L
Sbjct: 181 SACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPER-NL 239
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
V+ N M+ + G ++ A +F + E D VSW T+I G ++ ++ AL + EM+
Sbjct: 240 VTWNVMLNGYSKAGLIEQAEELFDQITE-KDIVSWGTMIDGCLRKNQLDEALVYYTEMLR 298
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
G++ ++ + +LSA G +H ++K F+ + I+ FY +++
Sbjct: 299 CGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKL 358
Query: 316 AESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 374
A + +K A+ ++LIAG+ G + +A+ +FD +++ W A+ SGY +S
Sbjct: 359 ALQQFEA-SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLS 417
Query: 375 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 434
+ LFRE ++ + PD + +V+V A + +L GK+ H Y+ + + ++ L +
Sbjct: 418 PQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTA 477
Query: 435 ALVDMYSKCGNIAYAEKSFQLVTD-SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
A++DMY+KCG+I A F + S + +N +I G A HG A+ L+ ++ +
Sbjct: 478 AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLP 537
Query: 494 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
+KP++ITFV +LSAC H GLVELG+ +F SMK D+ + P+I HY CMVD+ G+ +LE+A
Sbjct: 538 IKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEA 597
Query: 554 VEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAE 613
E ++K+P++ D IWG L+A + + N + + A EL ++ +G V L+NVYA
Sbjct: 598 KEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADA 657
Query: 614 GKWNEMGRIRKEMRGKE 630
G+W ++ +R+EMR ++
Sbjct: 658 GRWEDVALVREEMRTRD 674
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 227/482 (47%), Gaps = 44/482 (9%)
Query: 128 EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS 187
E L + L A V G+Q+H ++K+ D + + +S+++MY+KC +A +VF
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 188 GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERAL 247
+D S N MV R ++ AL +F PE VS+ TLI GY QN A+
Sbjct: 101 D-HAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPE-RSCVSYTTLIKGYAQNNQWSEAM 158
Query: 248 TLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFY 307
LF EM GI N+ TLA+V+SAC+ L + + + +L +K FVS+ ++ Y
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 308 CKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCS 367
C C ++ A ++ + ++ + ++ GYS G + +A+ LFD ++E++ V W +
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Query: 368 GYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN 427
G ++ Q + + E + P +++V++L A A S G Q H I++ +
Sbjct: 279 GCLRKNQLDEALVYYTEMLRC-GMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Query: 428 MDEKLASALVDMYSKCGNIAYAEKSFQL-VTD---------------------------- 458
+ L + ++ Y+ +I A + F+ V D
Sbjct: 338 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 397
Query: 459 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELG 517
D+D+ +N MI+GYA A+ LF+EM+ S +KPDAIT V++ SA G +E G
Sbjct: 398 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 457
Query: 518 EKFFMSMKEDY----NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATI--WGA 571
++ DY + P A ++DMY + +E A+ + +TI W A
Sbjct: 458 KR-----AHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNA 512
Query: 572 FL 573
+
Sbjct: 513 II 514
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/636 (30%), Positives = 314/636 (49%), Gaps = 86/636 (13%)
Query: 27 SIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSAS 86
+I + N ++ Y +GL +EA +LFD+M RN SWN ++ YIK + +AR +F+
Sbjct: 47 AIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP 106
Query: 87 HRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCY 146
R++VS+ +M+ Y +G A LF RM +E++ T M
Sbjct: 107 ERNVVSWTAMVKGYM-QEGMVGEAESLFWRMPER------NEVSWTVMFG---------- 149
Query: 147 GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACC 206
LID + R+ Y++ V D+V+ M+ C
Sbjct: 150 ---------------------GLID-DGRIDKARKLYDMMP----VKDVVASTNMIGGLC 183
Query: 207 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLA 266
R+G++D A +F + E N V+W T+I GY QN ++ A LF M EK T
Sbjct: 184 REGRVDEARLIFDEMRERN-VVTWTTMITGYRQNNRVDVARKLFEVMPEK-------TEV 235
Query: 267 SVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 326
S S G Y G + AE + + +K
Sbjct: 236 SWTSMLLG--------------------------------YTLSGRIEDAEEFFEVMPMK 263
Query: 327 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 386
A +++I G+ G ++KA+R+FD + +R+ W + Y + LF + +
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 387 TTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI 446
+ + P ++++L CA A+L G+Q HA+++R + + D +AS L+ MY KCG +
Sbjct: 324 K-QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Query: 447 AYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLS 506
A+ F S +D+I++N +I+GYA HG +A+++F EM P+ +T +A+L+
Sbjct: 383 VKAKLVFDRF--SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 507 ACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDA 566
AC + G +E G + F SM+ + V P + HY+C VDM GR Q++KA+E + + I+ DA
Sbjct: 441 ACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDA 500
Query: 567 TIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEM 626
T+WGA L ACK ++ L + A ++L + E DN YV L+++ A+ KW ++ +RK M
Sbjct: 501 TVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNM 560
Query: 627 RGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 662
R +K PGCSWI V +H+FT G + A+
Sbjct: 561 RTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAM 596
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 368
+ G + A + + K+ + +S+++GY S G +A++LFD +SERN V W L SG
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSG 88
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA-IQATLSLGKQTHAYILRTKLN 427
Y+K+ ++ E R L+P+ NV+ A ++ + G A L +
Sbjct: 89 YIKN-------RMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLFWR-- 135
Query: 428 MDEKLASALVDMYSKC---GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 484
M E+ + M+ G I A K + ++ +DV+ MI G G ++A
Sbjct: 136 MPERNEVSWTVMFGGLIDDGRIDKARKLYDMM--PVKDVVASTNMIGGLCREGRVDEARL 193
Query: 485 LFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY 544
+F EM + + +T+ +++ R V++ K F M E V + M+ Y
Sbjct: 194 IFDEM----RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEV-----SWTSMLLGY 244
Query: 545 GRGNQLEKAVEFMRKIPIQ 563
++E A EF +P++
Sbjct: 245 TLSGRIEDAEEFFEVMPMK 263
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 318 bits (815), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 324/623 (52%), Gaps = 40/623 (6%)
Query: 46 EAHKLFDKMPH-RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGAD 104
+ H L KM + ++ F N+++ Y + L AR +FD S R++VS+ SM+ YA D
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 105 GCDTVALDLFARMQSARDT-IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK 163
A+DLF RM RD + + +T+ +++ AKL + G+++++++ + +++
Sbjct: 215 FAKD-AVDLFFRM--VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 164 FALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE 223
+S+L+DMY KC + A +F G +L NAM +
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEY-GASNLDLCNAMAS-------------------- 310
Query: 224 FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKC 283
YV+ G AL +F M++ G+ ++ ++ S +S+C+ L+ + GK
Sbjct: 311 ------------NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 284 VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 343
H VL+N S + + ++D Y KC A ++ + K+ +S++AGY G
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 344 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 403
+ A F+++ E+N V W + SG V+ E ++F ++ E + D + ++++
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 404 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 463
AC L L K + YI + + +D +L + LVDM+S+CG+ A F +T+ RDV
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN--RDV 536
Query: 464 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 523
+ I A G +AI+LF +M++ LKPD + FV L+AC H GLV+ G++ F S
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYS 596
Query: 524 MKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTT 583
M + + V PE HY CMVD+ GR LE+AV+ + +P++ + IW + L AC++ N
Sbjct: 597 MLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVE 656
Query: 584 LVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVE 643
+ A E++ + + YV L+NVYA+ G+WN+M ++R M+ K K PG S I +
Sbjct: 657 MAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIR 716
Query: 644 NGIHVFTSGDTSHSKADAIYSTL 666
H FTSGD SH + I + L
Sbjct: 717 GKTHEFTSGDESHPEMPNIEAML 739
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 152/324 (46%), Gaps = 38/324 (11%)
Query: 188 GCDGVVDLVSKNAMVAACCRDG---KMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 244
G D V ++K +VA C G + A VF + + +N+LI GY +G
Sbjct: 59 GLDNDVSTITK--LVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCN 116
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 304
A+ LF+ M+ GI +++T LSAC + G +H L++K + FV + +V
Sbjct: 117 EAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 305 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 364
FY +CG + A V FD +SERN V WT+
Sbjct: 177 HFYAECGELDSARKV-------------------------------FDEMSERNVVSWTS 205
Query: 365 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 424
+ GY + + LF E + P+++ +V V+ ACA L G++ +A+I +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 425 KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 484
+ +++ + SALVDMY KC I A++ F S+ D L N M + Y G +A+
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD--LCNAMASNYVRQGLTREALG 323
Query: 485 LFQEMLKISLKPDAITFVALLSAC 508
+F M+ ++PD I+ ++ +S+C
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSC 347
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 129/535 (24%), Positives = 231/535 (43%), Gaps = 114/535 (21%)
Query: 73 HNLTQARALFD-SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITL 131
+L+ A+ +F+ S S+ YNS++ YA + C+ L LF RM ++ I D+ T
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL-LFLRMMNS--GISPDKYTF 137
Query: 132 TTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG 191
L+ AK R G Q+H +VK F +SL+ Y++C
Sbjct: 138 PFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC--------------- 182
Query: 192 VVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFI 251
G++D A VF + E N VSW ++I GY + + + A+ LF
Sbjct: 183 -----------------GELDSARKVFDEMSERN-VVSWTSMICGYARRDFAKDAVDLFF 224
Query: 252 EMI-EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-NQFVSSGIVDFYCK 309
M+ ++ + N T+ V+SAC L+ L+ G+ V+A + +N G N + S +VD Y K
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVNDLMVSALVDMYMK 283
Query: 310 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 369
C + AKRLFD N + A+ S Y
Sbjct: 284 CNAIDV-------------------------------AKRLFDEYGASNLDLCNAMASNY 312
Query: 370 VK---SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 426
V+ +++ VF L + + PD + +++ + +C+ + GK H Y+LR
Sbjct: 313 VRQGLTREALGVFNLMMD----SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368
Query: 427 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ-- 484
+ + +AL+DMY KC A + F + S++ V+ +N ++AGY +G + A +
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRM--SNKTVVTWNSIVAGYVENGEVDAAWETF 426
Query: 485 ----------------------LFQEMLKI--------SLKPDAITFVALLSACRHRGLV 514
LF+E +++ + D +T +++ SAC H G +
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 486
Query: 515 ELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIW 569
+L + + ++++ + ++ +VDM+ R E A+ + + D + W
Sbjct: 487 DLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAW 539
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 153/334 (45%), Gaps = 37/334 (11%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +++G S CN LI +Y A ++FD+M ++ +WN+I+ Y++ +
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A F++ +++VS+N+++S + A+++F MQS ++ + D +T+ ++
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEE-AIEVFCSMQS-QEGVNADGVTMMSIA 477
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ L + K ++ Y+ K L ++L+DM+S+CG A ++F+ L
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS------L 531
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
++ D +W I G ERA+ LF +MIE
Sbjct: 532 TNR---------------------------DVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYCKCGNMR 314
+G++ + L+AC+ ++ GK + +LK G S + V G +VD + G +
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 315 YAESVYAGIGIK-SPFATSSLIAGYSSKGNMTKA 347
A + + ++ + +SL+A +GN+ A
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 324/623 (52%), Gaps = 40/623 (6%)
Query: 46 EAHKLFDKMPH-RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGAD 104
+ H L KM + ++ F N+++ Y + L AR +FD S R++VS+ SM+ YA D
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 105 GCDTVALDLFARMQSARDT-IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK 163
A+DLF RM RD + + +T+ +++ AKL + G+++++++ + +++
Sbjct: 215 FAKD-AVDLFFRM--VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 164 FALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE 223
+S+L+DMY KC + A +F G +L NAM +
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEY-GASNLDLCNAMAS-------------------- 310
Query: 224 FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKC 283
YV+ G AL +F M++ G+ ++ ++ S +S+C+ L+ + GK
Sbjct: 311 ------------NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 284 VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 343
H VL+N S + + ++D Y KC A ++ + K+ +S++AGY G
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 344 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 403
+ A F+++ E+N V W + SG V+ E ++F ++ E + D + ++++
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 404 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 463
AC L L K + YI + + +D +L + LVDM+S+CG+ A F +T+ RDV
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN--RDV 536
Query: 464 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 523
+ I A G +AI+LF +M++ LKPD + FV L+AC H GLV+ G++ F S
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYS 596
Query: 524 MKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTT 583
M + + V PE HY CMVD+ GR LE+AV+ + +P++ + IW + L AC++ N
Sbjct: 597 MLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVE 656
Query: 584 LVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVE 643
+ A E++ + + YV L+NVYA+ G+WN+M ++R M+ K K PG S I +
Sbjct: 657 MAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIR 716
Query: 644 NGIHVFTSGDTSHSKADAIYSTL 666
H FTSGD SH + I + L
Sbjct: 717 GKTHEFTSGDESHPEMPNIEAML 739
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 152/324 (46%), Gaps = 38/324 (11%)
Query: 188 GCDGVVDLVSKNAMVAACCRDG---KMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 244
G D V ++K +VA C G + A VF + + +N+LI GY +G
Sbjct: 59 GLDNDVSTITK--LVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCN 116
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 304
A+ LF+ M+ GI +++T LSAC + G +H L++K + FV + +V
Sbjct: 117 EAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 305 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 364
FY +CG + A V FD +SERN V WT+
Sbjct: 177 HFYAECGELDSARKV-------------------------------FDEMSERNVVSWTS 205
Query: 365 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 424
+ GY + + LF E + P+++ +V V+ ACA L G++ +A+I +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 425 KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 484
+ +++ + SALVDMY KC I A++ F S+ D L N M + Y G +A+
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD--LCNAMASNYVRQGLTREALG 323
Query: 485 LFQEMLKISLKPDAITFVALLSAC 508
+F M+ ++PD I+ ++ +S+C
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSC 347
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 129/535 (24%), Positives = 231/535 (43%), Gaps = 114/535 (21%)
Query: 73 HNLTQARALFD-SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITL 131
+L+ A+ +F+ S S+ YNS++ YA + C+ L LF RM ++ I D+ T
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL-LFLRMMNS--GISPDKYTF 137
Query: 132 TTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG 191
L+ AK R G Q+H +VK F +SL+ Y++C
Sbjct: 138 PFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC--------------- 182
Query: 192 VVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFI 251
G++D A VF + E N VSW ++I GY + + + A+ LF
Sbjct: 183 -----------------GELDSARKVFDEMSERN-VVSWTSMICGYARRDFAKDAVDLFF 224
Query: 252 EMI-EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-NQFVSSGIVDFYCK 309
M+ ++ + N T+ V+SAC L+ L+ G+ V+A + +N G N + S +VD Y K
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVNDLMVSALVDMYMK 283
Query: 310 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 369
C + AKRLFD N + A+ S Y
Sbjct: 284 CNAIDV-------------------------------AKRLFDEYGASNLDLCNAMASNY 312
Query: 370 VK---SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 426
V+ +++ VF L + + PD + +++ + +C+ + GK H Y+LR
Sbjct: 313 VRQGLTREALGVFNLMMD----SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368
Query: 427 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ-- 484
+ + +AL+DMY KC A + F + S++ V+ +N ++AGY +G + A +
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRM--SNKTVVTWNSIVAGYVENGEVDAAWETF 426
Query: 485 ----------------------LFQEMLKI--------SLKPDAITFVALLSACRHRGLV 514
LF+E +++ + D +T +++ SAC H G +
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 486
Query: 515 ELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIW 569
+L + + ++++ + ++ +VDM+ R E A+ + + D + W
Sbjct: 487 DLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAW 539
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 153/334 (45%), Gaps = 37/334 (11%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +++G S CN LI +Y A ++FD+M ++ +WN+I+ Y++ +
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A F++ +++VS+N+++S + A+++F MQS ++ + D +T+ ++
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEE-AIEVFCSMQS-QEGVNADGVTMMSIA 477
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ L + K ++ Y+ K L ++L+DM+S+CG A ++F+ L
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS------L 531
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
++ D +W I G ERA+ LF +MIE
Sbjct: 532 TNR---------------------------DVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYCKCGNMR 314
+G++ + L+AC+ ++ GK + +LK G S + V G +VD + G +
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 315 YAESVYAGIGIK-SPFATSSLIAGYSSKGNMTKA 347
A + + ++ + +SL+A +GN+ A
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 313/595 (52%), Gaps = 42/595 (7%)
Query: 74 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
+++ A LF D+V +N+M+ ++ D CD + L+ M ++ + D T
Sbjct: 83 HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVD-CDGEGVRLYLNM--LKEGVTPDSHTFPF 139
Query: 134 MLN-LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
+LN L + GK++H ++VK + + ++L+ MYS CG
Sbjct: 140 LLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGL-------------- 185
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
MDMA VF + + D SWN +I+GY + E ++ L +E
Sbjct: 186 ------------------MDMARGVFDRRCK-EDVFSWNLMISGYNRMKEYEESIELLVE 226
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
M + TL VLSAC+ +K L K VH V + + + + +V+ Y CG
Sbjct: 227 MERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGE 286
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
M A ++ + + + +S++ GY +GN+ A+ FD + R+ + WT + GY+++
Sbjct: 287 MDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRA 346
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
++FRE ++ +IPD +V+VL ACA +L +G+ YI + K+ D +
Sbjct: 347 GCFNESLEIFREMQSA-GMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVV 405
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSD-RDVILYNVMIAGYAHHGFENKAIQLFQEMLK 491
+AL+DMY KCG A+K F D D RD + M+ G A++G +AI++F +M
Sbjct: 406 GNALIDMYFKCGCSEKAQKVFH---DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQD 462
Query: 492 ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLE 551
+S++PD IT++ +LSAC H G+V+ KFF M+ D+ + P + HY CMVDM GR ++
Sbjct: 463 MSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVK 522
Query: 552 KAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYA 611
+A E +RK+P+ ++ +WGA L A +++N+ + + A +++L++E DNG+ Y L N+YA
Sbjct: 523 EAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYA 582
Query: 612 AEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
+W ++ +R+++ K PG S I V H F +GD SH +++ IY L
Sbjct: 583 GCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 637
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/548 (20%), Positives = 225/548 (41%), Gaps = 111/548 (20%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +K GL S+++ N L+ +YS+ GL+
Sbjct: 158 HCHVVKFGLGSNLYVQNALVKMYSLCGLMD------------------------------ 187
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
AR +FD D+ S+N M+S Y + +++L M+ R+ + +TL +L
Sbjct: 188 -MARGVFDRRCKEDVFSWNLMISGYNRMKEYEE-SIELLVEME--RNLVSPTSVTLLLVL 243
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ +K++ K++H Y+ + + S ++L++ Y+ CG A +F D+
Sbjct: 244 SACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKA-RDV 302
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+S ++V G + +A F + P D +SW +I GY++ G +L +F EM
Sbjct: 303 ISWTSIVKGYVERGNLKLARTYFDQMP-VRDRISWTIMIDGYLRAGCFNESLEIFREMQS 361
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
G+ ++ T+ SVL+AC L L++G+ + + KN ++ V + ++D Y KCG
Sbjct: 362 AGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEK 421
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
A+ V+ + + F ++++ G ++ G +A ++F + +
Sbjct: 422 AQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDM------------------ 463
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
++ PD + + VL AC + ++ A K+ D ++ +
Sbjct: 464 --------------SIQPDDITYLGVLSACNHSGMVDQARKFFA-----KMRSDHRIEPS 504
Query: 436 LVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
LV Y M+ G +A ++ ++M +
Sbjct: 505 LVH---------------------------YGCMVDMLGRAGLVKEAYEILRKM---PMN 534
Query: 496 PDAITFVALLSACR---HRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
P++I + ALL A R + EL K + ++ D + YA + ++Y + +
Sbjct: 535 PNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAV-----YALLCNIYAGCKRWKD 589
Query: 553 AVEFMRKI 560
E RKI
Sbjct: 590 LREVRRKI 597
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 160/392 (40%), Gaps = 57/392 (14%)
Query: 6 VRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAI 65
V+D + R H + S+ N L++ Y+ G + A ++F M R+ SW +I
Sbjct: 249 VKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSI 308
Query: 66 IMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIG 125
+ Y++ NL AR FD RD +S+ M+ Y A GC +L++F MQSA G
Sbjct: 309 VKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRA-GCFNESLEIFREMQSA----G 363
Query: 126 M--DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 183
M DE T+ ++L A L + G+ + +Y+ K ++LIDMY KCG +A
Sbjct: 364 MIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQ 423
Query: 184 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 243
VF D D +W ++ G NG
Sbjct: 424 KVFHDMDQ---------------------------------RDKFTWTAMVVGLANNGQG 450
Query: 244 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG- 302
+ A+ +F +M + I+ + T VLSAC + + A + + V G
Sbjct: 451 QEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGC 510
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG--------YSSKGNMTKAKRLFDSL 354
+VD + G ++ A + K P +S++ G ++ + A + L
Sbjct: 511 MVDMLGRAGLVKEAYEILR----KMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILEL 566
Query: 355 SERNYVVWTALCSGYVKSQQCEAVFKLFREFR 386
N V+ LC+ Y ++ +K RE R
Sbjct: 567 EPDNGAVYALLCNIYAGCKR----WKDLREVR 594
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 142/319 (44%), Gaps = 18/319 (5%)
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSK--GNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
+++S+ G+ +P L + S+ G+++ A +LF + E + VVW + G+ K
Sbjct: 54 HSQSITRGVA-PNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKV 112
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVL-GACAIQATLSLGKQTHAYILRTKLNMDEK 431
+L+ E + PD+ +L G L+ GK+ H ++++ L +
Sbjct: 113 DCDGEGVRLYLNM-LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLY 171
Query: 432 LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 491
+ +ALV MYS CG + A F DV +N+MI+GY ++I+L EM +
Sbjct: 172 VQNALVKMYSLCGLMDMARGVFD--RRCKEDVFSWNLMISGYNRMKEYEESIELLVEMER 229
Query: 492 ISLKPDAITFVALLSAC---RHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGN 548
+ P ++T + +LSAC + + L + ++ K + P + +V+ Y
Sbjct: 230 NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE----PSLRLENALVNAYAACG 285
Query: 549 QLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLAN 608
+++ AV R + + D W + + N L + +++ + + + +
Sbjct: 286 EMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLARTYFDQM---PVRDRISWTIMID 341
Query: 609 VYAAEGKWNEMGRIRKEMR 627
Y G +NE I +EM+
Sbjct: 342 GYLRAGCFNESLEIFREMQ 360
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 124/306 (40%), Gaps = 42/306 (13%)
Query: 377 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 436
++FK TE++ D +++LG C T KQ H+ + + + L
Sbjct: 16 SIFKALLMSTITESISNDYSRFISILGVC---KTTDQFKQLHSQSITRGVAPNPTFQKKL 72
Query: 437 VDMYSK--CGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 494
+ G+++YA K F V + DV+++N MI G++ + + ++L+ MLK +
Sbjct: 73 FVFWCSRLGGHVSYAYKLF--VKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGV 130
Query: 495 KPDAITFVALLSAC-RHRGLVELGEKF---------------------------FMSMKE 526
PD+ TF LL+ R G + G+K M M
Sbjct: 131 TPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMAR 190
Query: 527 ---DYNVLPEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDATIWGAFLNACKINN 580
D +++ + M+ Y R + E+++E M + + + L+AC
Sbjct: 191 GVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVK 250
Query: 581 NTTLVKQAEEELLKVEADNGSRYVQ-LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSW 639
+ L K+ E + + + + R L N YAA G+ + RI + M+ ++
Sbjct: 251 DKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVK 310
Query: 640 IYVENG 645
YVE G
Sbjct: 311 GYVERG 316
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 207/675 (30%), Positives = 345/675 (51%), Gaps = 47/675 (6%)
Query: 25 ASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDS 84
+++IF CN I ++ +G LQEA +F +M +R+ SW A+I AY + +++A +FD
Sbjct: 47 STAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDE 106
Query: 85 ASHRDLVSYNSMLSAYAGADGCDT-VALDLFARMQSARDTIGMDEITLTTMLNLSAKLRV 143
R SYN+M++A + CD A +LF D + ++ TM+ + +R
Sbjct: 107 MPVRVTTSYNAMITAMI-KNKCDLGKAYELFC------DIPEKNAVSYATMI--TGFVRA 157
Query: 144 VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVA 203
+ + Y A + L+ Y + G + EA VF G V ++VS ++MV
Sbjct: 158 GRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGM-AVKEVVSCSSMVH 216
Query: 204 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG-IEYNQ 262
C+ G++ A ++F + E N ++W +I GY + G+ E LF+ M ++G ++ N
Sbjct: 217 GYCKMGRIVDARSLFDRMTERN-VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNS 275
Query: 263 HTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAG 322
+TLA + AC + G +H LV + + F+ + ++ Y K G M A++V+
Sbjct: 276 NTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGV 335
Query: 323 IGIKSPFATSSLIAG-------------------------------YSSKGNMTKAKRLF 351
+ K + +SLI G +S KG ++K LF
Sbjct: 336 MKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELF 395
Query: 352 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 411
+ E++ + WTA+ S +V + E F + E + P++ +VL A A A L
Sbjct: 396 GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKE-VCPNSYTFSSVLSATASLADL 454
Query: 412 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 471
G Q H +++ + D + ++LV MY KCGN A K F + S+ +++ YN MI+
Sbjct: 455 IEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI--SEPNIVSYNTMIS 512
Query: 472 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVL 531
GY+++GF KA++LF + +P+ +TF+ALLSAC H G V+LG K+F SMK YN+
Sbjct: 513 GYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIE 572
Query: 532 PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEE 591
P HYACMVD+ GR L+ A + +P + + +WG+ L+A K + L + A ++
Sbjct: 573 PGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKK 632
Query: 592 LLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTS 651
L+++E D+ + YV L+ +Y+ GK + RI + K K PG SWI ++ +H F +
Sbjct: 633 LIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLA 692
Query: 652 GDTSHSKADAIYSTL 666
GD S + I TL
Sbjct: 693 GDESQLNLEEIGFTL 707
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 179/415 (43%), Gaps = 68/415 (16%)
Query: 13 YRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKA 72
+ + V+ + + +C+ ++H Y G + +A LFD+M RN +W A+I Y KA
Sbjct: 193 WNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKA 252
Query: 73 HNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLT 132
F+ DG LF RM+ D + ++ TL
Sbjct: 253 -------GFFE--------------------DG-----FGLFLRMRQEGD-VKVNSNTLA 279
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF------ 186
M G Q+H + + + F +SL+ MYSK G EA VF
Sbjct: 280 VMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK 339
Query: 187 ------SGCDGVV------------------DLVSKNAMVAACCRDGKMDMALNVFWKNP 222
S G+V D+VS M+ G++ + +F P
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMP 399
Query: 223 EFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGK 282
E D ++W +I+ +V NGY E AL F +M++K + N +T +SVLSA L L G
Sbjct: 400 E-KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 283 CVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKG 342
+H V+K + ++ V + +V YCKCGN A +++ I + + +++I+GYS G
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNG 518
Query: 343 NMTKAKRLFDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 393
KA +LF L E N V + AL S V + +K F+ +++ + P
Sbjct: 519 FGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEP 573
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 200/615 (32%), Positives = 310/615 (50%), Gaps = 70/615 (11%)
Query: 57 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 116
+N F NA++ Y K L AR +F+ RD V++N+++ +Y D ++ A DLF R
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV-QDENESEAFDLFKR 519
Query: 117 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 176
M I D L + L + + GKQ+H VK D SSLIDMYSKC
Sbjct: 520 MNLC--GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 177 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 236
G ++A VFS PE++ VS N LIAG
Sbjct: 578 GIIKDARKVFSSL--------------------------------PEWS-VVSMNALIAG 604
Query: 237 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 296
Y QN +E A+ LF EM+ +G+ ++ T A+++ AC + L LG H + K S
Sbjct: 605 YSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSS- 662
Query: 297 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS- 355
E Y GI SL+ Y + MT+A LF LS
Sbjct: 663 --------------------EGEYLGI---------SLLGMYMNSRGMTEACALFSELSS 693
Query: 356 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 415
++ V+WT + SG+ ++ E K ++E R + ++PD V VL C++ ++L G+
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH-DGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 416 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 475
H+ I ++DE ++ L+DMY+KCG++ + + F + +V+ +N +I GYA
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS-NVVSWNSLINGYAK 811
Query: 476 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 535
+G+ A+++F M + + PD ITF+ +L+AC H G V G K F M Y + +
Sbjct: 812 NGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVD 871
Query: 536 HYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKV 595
H ACMVD+ GR L++A +F+ ++ DA +W + L AC+I+ + + + E+L+++
Sbjct: 872 HVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIEL 931
Query: 596 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTS 655
E N S YV L+N+YA++G W + +RK MR + K+PG SWI VE H+F +GD S
Sbjct: 932 EPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKS 991
Query: 656 HSKADAIYSTLVCLY 670
HS+ I L LY
Sbjct: 992 HSEIGKIEMFLEDLY 1006
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 228/501 (45%), Gaps = 87/501 (17%)
Query: 29 FTCNQLIHLYSIHGLLQEAHKLFDKMP---HR-NAFSWNAIIMAYIKAHNLTQARALFDS 84
+TC L Y GL +EA +F++M HR + ++ +I YI+ L AR LF
Sbjct: 229 WTC--LFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGE 286
Query: 85 ASHRDLVSYNSMLSAYAGADGCDTVALDLFARM-----QSARDTIGMDEITLTTMLNLSA 139
S D+V++N M+S + G GC+TVA++ F M +S R T+G ++ + + + A
Sbjct: 287 MSSPDVVAWNVMISGH-GKRGCETVAIEYFFNMRKSSVKSTRSTLG----SVLSAIGIVA 341
Query: 140 KLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKN 199
L + G +H+ +K + + SSL+ MYSKC
Sbjct: 342 NLDL---GLVVHAEAIKLGLASNIYVGSSLVSMYSKCE---------------------- 376
Query: 200 AMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 259
KM+ A VF E ND V WN +I GY NG + + LF++M G
Sbjct: 377 ----------KMEAAAKVFEALEEKND-VFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 260 YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESV 319
+ T S+LS C L++G H++++K N FV + +VD Y KCG +
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE----- 480
Query: 320 YAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVF 379
A+++F+ + +R+ V W + YV+ + F
Sbjct: 481 --------------------------DARQIFERMCDRDNVTWNTIIGSYVQDENESEAF 514
Query: 380 KLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDM 439
LF+ ++ D + + L AC L GKQ H ++ L+ D S+L+DM
Sbjct: 515 DLFKRMNLC-GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 440 YSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAI 499
YSKCG I A K F + + V+ N +IAGY+ + E +A+ LFQEML + P I
Sbjct: 574 YSKCGIIKDARKVFSSLP--EWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEI 630
Query: 500 TFVALLSACRHRGLVELGEKF 520
TF ++ AC + LG +F
Sbjct: 631 TFATIVEACHKPESLTLGTQF 651
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/571 (25%), Positives = 245/571 (42%), Gaps = 123/571 (21%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +AIK GLAS+I+ + L+ +YS ++ A K+F+ + +N WNA+I Y AHN
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGY--AHN- 406
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
SH+ ++LF M+S+ I D+ T T++L
Sbjct: 407 --------GESHK---------------------VMELFMDMKSSGYNI--DDFTFTSLL 435
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG-CDGVVD 194
+ A + G Q HS ++K + F ++L+DMY+KCG+ +A +F CD
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD---- 491
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
D V+WNT+I YVQ+ A LF M
Sbjct: 492 ------------------------------RDNVTWNTIIGSYVQDENESEAFDLFKRMN 521
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
GI + LAS L ACT + L GK VH L +K + S ++D Y KCG ++
Sbjct: 522 LCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIK 581
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 374
A V++ + S + ++LIAGY S+ N+ +A LF +
Sbjct: 582 DARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEM-------------------- 620
Query: 375 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD-EKLA 433
T + P + ++ AC +L+LG Q H I + + + E L
Sbjct: 621 ------------LTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
+L+ MY + A F ++ S + ++L+ M++G++ +GF +A++ ++EM
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELS-SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG 727
Query: 494 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYA---------CMVDMY 544
+ PD TFV +L C S++E + I+H A ++DMY
Sbjct: 728 VLPDQATFVTVLRVC----------SVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMY 777
Query: 545 GRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
+ ++ + + ++ + + W + +N
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 147/591 (24%), Positives = 251/591 (42%), Gaps = 108/591 (18%)
Query: 44 LQEAHKLFDKMPHRNAFSW----------------------NAIIMAYIKAHNLTQARAL 81
L ++ K+FD+MP R A + NAI+ Y K ++ A
Sbjct: 58 LFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 82 FDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKL 141
FD +D+ ++NSMLS Y+ V + + + I ++ T + +L+ A+
Sbjct: 118 FDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE---NQIFPNKFTFSIVLSTCARE 173
Query: 142 RVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD------- 194
V +G+Q+H M+K + + + +L+DMY+KC +A VF + +VD
Sbjct: 174 TNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF---EWIVDPNTVCWT 230
Query: 195 ----------LVSKNAMVAACCRD--------------------GKMDMALNVFWKNPEF 224
L + +V RD GK+ A +F +
Sbjct: 231 CLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS- 289
Query: 225 NDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCV 284
D V+WN +I+G+ + G A+ F M + ++ + TL SVLSA + L LG V
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349
Query: 285 HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNM 344
HA +K SN +V S +V Y KC M A V+ + K+ +++I GY+ G
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGES 409
Query: 345 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 404
K LF + Y + D ++L
Sbjct: 410 HKVMELFMDMKSSGYNI--------------------------------DDFTFTSLLST 437
Query: 405 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 464
CA L +G Q H+ I++ KL + + +ALVDMY+KCG + A + F+ + DRD +
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC--DRDNV 495
Query: 465 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH-RGLVELGEKFFMS 523
+N +I Y E++A LF+ M + D + L AC H GL + + +S
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 524 MKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP----IQIDATIWG 570
+K + +++ + ++DMY + ++ A + +P + ++A I G
Sbjct: 556 VKCGLD--RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 198/483 (40%), Gaps = 79/483 (16%)
Query: 137 LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLV 196
L+ LR+ GK +HS + D ++++D+Y+KC A F D +
Sbjct: 72 LALALRI---GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-------DFL 121
Query: 197 SKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEK 256
K D +WN++++ Y G + L F+ + E
Sbjct: 122 EK---------------------------DVTAWNSMLSMYSSIGKPGKVLRSFVSLFEN 154
Query: 257 GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 316
I N+ T + VLS C ++ G+ +H ++K N + +VD Y KC + A
Sbjct: 155 QIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA 214
Query: 317 ESVYAGIGIKSPFATSSLIAGYSSK----------------------------------- 341
V+ I + + L +GY
Sbjct: 215 RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRL 274
Query: 342 GNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAV-FKLFREFRTTEALIPDTMIIVN 400
G + A+ LF +S + V W + SG+ K + CE V + F R + ++ + +
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGK-RGCETVAIEYFFNMRKS-SVKSTRSTLGS 332
Query: 401 VLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD 460
VL A I A L LG HA ++ L + + S+LV MYSKC + A K F+ + +
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL--EE 390
Query: 461 RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF 520
++ + +N MI GYAH+G +K ++LF +M D TF +LLS C +E+G +F
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 521 FMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINN 580
S+ + ++ +VDMY + LE A + ++ D W + + +
Sbjct: 451 H-SIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGSYVQDE 508
Query: 581 NTT 583
N +
Sbjct: 509 NES 511
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 22/229 (9%)
Query: 411 LSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMI 470
L +GK H+ L ++ + +L +A+VD+Y+KC ++YAEK F + ++DV +N M+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL---EKDVTAWNSML 132
Query: 471 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNV 530
+ Y+ G K ++ F + + + P+ TF +LS C VE G + SM + +
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGL 191
Query: 531 LPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQA-- 588
Y +VDMY + +++ A I + + W + VK
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSG--------YVKAGLP 242
Query: 589 EEELLKVE--ADNGSR-----YVQLANVYAAEGKWNEMGRIRKEMRGKE 630
EE +L E D G R +V + N Y GK + + EM +
Sbjct: 243 EEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPD 291
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 206/653 (31%), Positives = 315/653 (48%), Gaps = 103/653 (15%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +K GL + + C L+ +YS G++ EA +F + + WNA
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNA----------- 343
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
M++AYA D ALDLF M+ + ++ D TL+ ++
Sbjct: 344 --------------------MVAAYAEND-YGYSALDLFGFMR--QKSVLPDSFTLSNVI 380
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + L + YGK +H+ + K + S+L+ +YSKCG +AY VF
Sbjct: 381 SCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVF--------- 431
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
K+ E D V+W +LI+G +NG + AL +F +M +
Sbjct: 432 ------------------------KSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKD 467
Query: 256 K--GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
++ + + SV +AC GL+ L+ G VH ++K N FV S ++D Y KC
Sbjct: 468 DDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKC--- 524
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
G A ++F S+S N V W ++ S Y ++
Sbjct: 525 ----------------------------GLPEMALKVFTSMSTENMVAWNSMISCYSRNN 556
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
E LF ++ + PD++ I +VL A + A+L GK H Y LR + D L
Sbjct: 557 LPELSIDLFN-LMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK 615
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
+AL+DMY KCG YAE F+ + + +I +N+MI GY HG A+ LF EM K
Sbjct: 616 NALIDMYVKCGFSKYAENIFKKM--QHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAG 673
Query: 494 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
PD +TF++L+SAC H G VE G+ F MK+DY + P + HYA MVD+ GR LE+A
Sbjct: 674 ESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEA 733
Query: 554 VEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAE 613
F++ +PI+ D++IW L+A + ++N L + E+LL++E + GS YVQL N+Y
Sbjct: 734 YSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEA 793
Query: 614 GKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
G NE ++ M+ K K PGCSWI V + +VF SG +S I++ L
Sbjct: 794 GLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVL 846
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 134/605 (22%), Positives = 252/605 (41%), Gaps = 124/605 (20%)
Query: 9 ALVVYRDHVQAIKSGLASSIFT-------CNQLIHLY---SIHGLLQEAHKLFDKMPHRN 58
AL +Y H + S +S+FT C+ L +L +IHG + +D
Sbjct: 43 ALHLYSKHDGS--SPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYD------ 94
Query: 59 AFSWNAIIMAYIKAHNLTQARALFDSASH-------RDLVSYNSMLSAY------AGADG 105
F +++ Y+K L A +FD S RD+ +NSM+ Y G
Sbjct: 95 PFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVG 154
Query: 106 CDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCY--------GKQMHSYMVKT 157
C F RM G+ +LS + V+C GKQ+H +M++
Sbjct: 155 C-------FRRML----VFGVRP----DAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN 199
Query: 158 ANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNV 217
+ D F ++LIDMY K G +A+ VF V++ K+
Sbjct: 200 SLDTDSFLKTALIDMYFKFGLSIDAWRVF------VEIEDKS------------------ 235
Query: 218 FWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKC 277
+ V WN +I G+ +G E +L L++ ++ + L AC+ +
Sbjct: 236 --------NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSEN 287
Query: 278 LKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG 337
G+ +H V+K ++ +V + ++ Y KCG + AE+V
Sbjct: 288 SGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETV------------------ 329
Query: 338 YSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI 397
F + ++ +W A+ + Y ++ + LF F ++++PD+
Sbjct: 330 -------------FSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG-FMRQKSVLPDSFT 375
Query: 398 IVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVT 457
+ NV+ C++ + GK HA + + + + SAL+ +YSKCG A F+ +
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFK--S 433
Query: 458 DSDRDVILYNVMIAGYAHHGFENKAIQLFQEML--KISLKPDAITFVALLSACRHRGLVE 515
++D++ + +I+G +G +A+++F +M SLKPD+ ++ +AC +
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 516 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
G + SM + VL ++ + ++D+Y + E A++ + + + W + ++
Sbjct: 494 FGLQVHGSMIKTGLVL-NVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMISC 551
Query: 576 CKINN 580
NN
Sbjct: 552 YSRNN 556
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 204/670 (30%), Positives = 329/670 (49%), Gaps = 106/670 (15%)
Query: 6 VRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAI 65
++ + V + H +K I+ L+ +Y GL+++ K+F MP RN ++W+ +
Sbjct: 131 LQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTM 190
Query: 66 IMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIG 125
+ Y + +A +F+ LF R + G
Sbjct: 191 VSGYATRGRVEEAIKVFN-----------------------------LFLREKEE----G 217
Query: 126 MD-EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKF-ALS-SLIDMYSKCGSFREA 182
D + T +L+ A V G+Q+H +K N L F ALS +L+ MYSKC S EA
Sbjct: 218 SDSDYVFTAVLSSLAATIYVGLGRQIHCITIK--NGLLGFVALSNALVTMYSKCESLNEA 275
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
+F D D ++++W+ ++ GY QNG
Sbjct: 276 CKMF---------------------DSSGD------------RNSITWSAMVTGYSQNGE 302
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
A+ LF M GI+ +++T+ VL+AC+ + L+ GK +H+ +LK
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK------------ 350
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
G R+ FAT++L+ Y+ G + A++ FD L ER+ +W
Sbjct: 351 -------LGFERHL------------FATTALVDMYAKAGCLADARKGFDCLQERDVALW 391
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
T+L SGYV++ E L+R +T +IP+ + +VL AC+ ATL LGKQ H + +
Sbjct: 392 TSLISGYVQNSDNEEALILYRRMKTA-GIIPNDPTMASVLKACSSLATLELGKQVHGHTI 450
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
+ ++ + SAL MYSKCG++ F+ ++DV+ +N MI+G +H+G ++A
Sbjct: 451 KHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRT--PNKDVVSWNAMISGLSHNGQGDEA 508
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 542
++LF+EML ++PD +TFV ++SAC H+G VE G +F M + + P++ HYACMVD
Sbjct: 509 LELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVD 568
Query: 543 MYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 602
+ R QL++A EF+ I +W L+ACK + L A E+L+ + + S
Sbjct: 569 LLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESST 628
Query: 603 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 662
YVQL+ +Y A G+ ++ R+ K MR +K GCSWI ++N HVF GDT H +
Sbjct: 629 YVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEET 688
Query: 663 YSTLVCLYGK 672
LVCL +
Sbjct: 689 -KDLVCLVSR 697
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 33/235 (14%)
Query: 259 EYNQHT--LASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 316
E N HT L L+ + + L G+ VH +++ + ++ +V+FY KCG + A
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 317 ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE 376
S++ I K + +SLI GYS G ++ S Y
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGIS---------------------SSYT------ 101
Query: 377 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 436
V +LFRE R + ++P+ + + A + + ++G+Q HA +++ D + ++L
Sbjct: 102 -VMQLFREMRAQD-ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSL 159
Query: 437 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 491
V MY K G + K F + +R+ ++ M++GYA G +AI++F L+
Sbjct: 160 VGMYCKAGLVEDGLKVFAYM--PERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 311 bits (798), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 187/614 (30%), Positives = 306/614 (49%), Gaps = 71/614 (11%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N+++ Y K A LF S D V++N M+S Y + G +L F M S+
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS-GLMEESLTFFYEMISS-- 334
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ D IT +++L +K + Y KQ+H Y+++ + L F S+LID Y KC A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
N+FS C+ V D V + +I+GY+ NG
Sbjct: 395 QNIFSQCNSV---------------------------------DVVVFTAMISGYLHNGL 421
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
+L +F +++ I N+ TL S+L L LKLG+ +H ++K + +
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
++D Y KCG M A + F+ LS+R+ V W
Sbjct: 482 VIDMYAKCGRMNLAYEI-------------------------------FERLSKRDIVSW 510
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
++ + +S A +FR+ + + D + I L ACA + S GK H +++
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVS-GICYDCVSISAALSACANLPSESFGKAIHGFMI 569
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
+ L D S L+DMY+KCGN+ A F+ T +++++ +N +IA +HG +
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMNVFK--TMKEKNIVSWNSIIAACGNHGKLKDS 627
Query: 483 IQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 541
+ LF EM++ S ++PD ITF+ ++S+C H G V+ G +FF SM EDY + P+ HYAC+V
Sbjct: 628 LCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVV 687
Query: 542 DMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 601
D++GR +L +A E ++ +P DA +WG L AC+++ N L + A +L+ ++ N
Sbjct: 688 DLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSG 747
Query: 602 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADA 661
YV ++N +A +W + ++R M+ +E K+PG SWI + H+F SGD +H ++
Sbjct: 748 YYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSH 807
Query: 662 IYSTLVCLYGKLYL 675
IYS L L G+L L
Sbjct: 808 IYSLLNSLLGELRL 821
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/519 (25%), Positives = 246/519 (47%), Gaps = 72/519 (13%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
N F +++I AY++ + LFD +D V +N ML+ YA D+V + F+ M
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV-IKGFSVM 230
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
+ D I + +T +L++ A ++ G Q+H +V + D +SL+ MYSKCG
Sbjct: 231 R--MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG 288
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
F +A +F ++S+ DTV+WN +I+GY
Sbjct: 289 RFDDASKLFR-------MMSRA--------------------------DTVTWNCMISGY 315
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 297
VQ+G ME +LT F EMI G+ + T +S+L + + + L+ K +H ++++ +
Sbjct: 316 VQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDI 375
Query: 298 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 357
F++S ++D Y KC + A+++ F +
Sbjct: 376 FLTSALIDAYFKCRGVSMAQNI-------------------------------FSQCNSV 404
Query: 358 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 417
+ VV+TA+ SGY+ + ++FR + + P+ + +V++L I L LG++
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLALKLGREL 463
Query: 418 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 477
H +I++ + + A++DMY+KCG + A + F+ + S RD++ +N MI A
Sbjct: 464 HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL--SKRDIVSWNSMITRCAQSD 521
Query: 478 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 537
+ AI +F++M + D ++ A LSAC + G+ M + +++ ++Y
Sbjct: 522 NPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSE 580
Query: 538 ACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNAC 576
+ ++DMY + L+ A+ + + + + W + + AC
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAAC 618
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 190/410 (46%), Gaps = 51/410 (12%)
Query: 186 FSGCDGVVDLVSK----------NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 235
F G D + D VS ++++ A GK+D+ +F + + D V WN ++
Sbjct: 154 FKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ-KDCVIWNVMLN 212
Query: 236 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 295
GY + G ++ + F M I N T VLS C + LG +H LV
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLV------- 265
Query: 296 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 355
V SG VDF G+++ +SL++ YS G A +LF +S
Sbjct: 266 ---VVSG-VDFE---GSIK-----------------NSLLSMYSKCGRFDDASKLFRMMS 301
Query: 356 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 415
+ V W + SGYV+S E F E + ++PD + ++L + + L K
Sbjct: 302 RADTVTWNCMISGYVQSGLMEESLTFFYEM-ISSGVLPDAITFSSLLPSVSKFENLEYCK 360
Query: 416 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 475
Q H YI+R +++D L SAL+D Y KC ++ A+ F DV+++ MI+GY H
Sbjct: 361 QIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV--DVVVFTAMISGYLH 418
Query: 476 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEI 534
+G ++++F+ ++K+ + P+ IT V++L ++LG + +K+ ++ I
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI 478
Query: 535 YHYAC-MVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTT 583
C ++DMY + ++ A E ++ + D W + + C ++N +
Sbjct: 479 ---GCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPS 524
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 193/441 (43%), Gaps = 48/441 (10%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
+ F +A+I AY K ++ A+ +F + D+V + +M+S Y +G +L++F +
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYL-HNGLYIDSLEMFRWL 432
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
+ I +EITL ++L + L + G+++H +++K D ++IDMY+KCG
Sbjct: 433 VKVK--ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG 490
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
AY +F + +SK D VSWN++I
Sbjct: 491 RMNLAYEIF-------ERLSKR--------------------------DIVSWNSMITRC 517
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 297
Q+ A+ +F +M GI Y+ ++++ LSAC L GK +H ++K+ S+
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV 577
Query: 298 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 357
+ S ++D Y KCGN++ A +V+ + K+ + +S+IA + G + + LF + E+
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637
Query: 358 -----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 412
+ + + + S + + FR + P AC +
Sbjct: 638 SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHY-----ACVVDLFGR 692
Query: 413 LGKQTHAY--ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMI 470
G+ T AY + D + L+ N+ AE + + D D Y V+I
Sbjct: 693 AGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLI 752
Query: 471 AGYAHHGFENKAIQLFQEMLK 491
+ + E +++ + ++K
Sbjct: 753 SNAHANAREWESVTKVRSLMK 773
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 128/314 (40%), Gaps = 73/314 (23%)
Query: 265 LASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIG 324
L+ +L AC+ L+ GK VHA ++ N + + I+ Y CG+ ++ +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 325 IK--SPFATSSLIAGYSSKGNMTKAKRLF------------------------------- 351
++ S +S+I+ + G + +A +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 352 DSLSER--------NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALI----------- 392
D LS+ N V ++L Y++ + + KLF + +I
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 393 -------------------PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
P+ + VL CA + + LG Q H ++ + ++ + +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
++L+ MYSKCG A K F++++ + D + +N MI+GY G +++ F EM+
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRA--DTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 494 LKPDAITFVALLSA 507
+ PDAITF +LL +
Sbjct: 336 VLPDAITFSSLLPS 349
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 386 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 445
R E IP + ++ L AC+ L GKQ HA+++ ++ D ++ MY+ CG+
Sbjct: 28 RFLEETIPRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGS 85
Query: 446 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 505
+ K F + + +N +I+ + +G N+A+ + +ML + PD TF L+
Sbjct: 86 FSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLV 145
Query: 506 SAC----RHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP 561
AC +G+ L + S+ D N + + ++ Y +++ + ++
Sbjct: 146 KACVALKNFKGIDFLSDT-VSSLGMDCNE----FVASSLIKAYLEYGKIDVPSKLFDRV- 199
Query: 562 IQIDATIWGAFLNA 575
+Q D IW LN
Sbjct: 200 LQKDCVIWNVMLNG 213
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 258/448 (57%), Gaps = 3/448 (0%)
Query: 226 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVH 285
DT WN +I G+ + ER+L L+ M+ +N +T S+L AC+ L + +H
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 286 ALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMT 345
A + K ++ + + +++ Y GN + A ++ I + +S+I GY G M
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 346 KAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGAC 405
A LF ++E+N + WT + SGYV++ + +LF E + ++ + PD + + N L AC
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD-VEPDNVSLANALSAC 257
Query: 406 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 465
A L GK H+Y+ +T++ MD L L+DMY+KCG + A + F+ + + V
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI--KKKSVQA 315
Query: 466 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMK 525
+ +I+GYA+HG +AI F EM K+ +KP+ ITF A+L+AC + GLVE G+ F SM+
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
Query: 526 EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLV 585
DYN+ P I HY C+VD+ GR L++A F++++P++ +A IWGA L AC+I+ N L
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435
Query: 586 KQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENG 645
++ E L+ ++ +G RYV AN++A + KW++ R+ M+ + K+PGCS I +E
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 495
Query: 646 IHVFTSGDTSHSKADAIYSTLVCLYGKL 673
H F +GD SH + + I S + KL
Sbjct: 496 THEFLAGDRSHPEIEKIQSKWRIMRRKL 523
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 203/459 (44%), Gaps = 52/459 (11%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H Q K G + ++ N LI+ Y++ G + AH LFD++P + SWN++I Y+KA +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A LF + ++ +S+ +M+S Y AD + AL LF MQ++ + D ++L L
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQAD-MNKEALQLFHEMQNS--DVEPDNVSLANAL 254
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ A+L + GK +HSY+ KT + LIDMY+KCG EA VF
Sbjct: 255 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF--------- 305
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
KN + +W LI+GY +G+ A++ F+EM +
Sbjct: 306 ------------------------KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQK 341
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYCKCGNMR 314
GI+ N T +VL+AC+ ++ GK + + ++ G IVD + G +
Sbjct: 342 MGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLD 401
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKG-NMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
A+ + P +++I G K + K L + + E + YV
Sbjct: 402 EAKRFIQEM----PLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKA 457
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD-EKL 432
A+ K + + T L+ + + V G +T+SL TH ++ + + + EK+
Sbjct: 458 NIHAMDKKWDKAAETRRLMKEQG-VAKVPGC----STISLEGTTHEFLAGDRSHPEIEKI 512
Query: 433 ASALVDMYSKCGNIAYA----EKSFQLVTDSDRDVILYN 467
S M K Y E LV D +R+ I++
Sbjct: 513 QSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQ 551
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 200/446 (44%), Gaps = 72/446 (16%)
Query: 75 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
L A+ +FD D +N M+ ++ +D + +L L+ RM + + + T ++
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPER-SLLLYQRMLCS--SAPHNAYTFPSL 121
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
L + L Q+H+ + K + +A++SLI+ Y+ G+F+ A+ +F D
Sbjct: 122 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 181
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
VS N+++ + GKMD+AL +F K E N +SW T+I+GYVQ + AL LF EM
Sbjct: 182 -VSWNSVIKGYVKAGKMDIALTLFRKMAEKN-AISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
+E + +LA+ LSAC L L+ GK +H+ + K + + ++D Y KCG M
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 299
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 374
A V+ I KS A ++LI+GY+ G+ +A S +++ Q+
Sbjct: 300 EALEVFKNIKKKSVQAWTALISGYAYHGHGREA------------------ISKFMEMQK 341
Query: 375 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 434
+ P+ + VL AC+ + GK
Sbjct: 342 M--------------GIKPNVITFTAVLTACSYTGLVEEGK------------------- 368
Query: 435 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 494
+ YS E+ + L + Y ++ G ++A + QEM L
Sbjct: 369 --LIFYS-------MERDYNLKPTIEH----YGCIVDLLGRAGLLDEAKRFIQEM---PL 412
Query: 495 KPDAITFVALLSACRHRGLVELGEKF 520
KP+A+ + ALL ACR +ELGE+
Sbjct: 413 KPNAVIWGALLKACRIHKNIELGEEI 438
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 185/629 (29%), Positives = 315/629 (50%), Gaps = 82/629 (13%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
N+F N ++ Y K L ++ L S RDLV++N++LS+ + AL+ M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL-LEALEYLREM 293
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAN-DLSKFALSSLIDMYSKC 176
+ + DE T++++L + L ++ GK++H+Y +K + D + F S+L+DMY C
Sbjct: 294 --VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351
Query: 177 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 236
VF DG D + + WN +IAG
Sbjct: 352 KQVLSGRRVF---------------------DGMFDRKIGL------------WNAMIAG 378
Query: 237 YVQNGYMERALTLFIEMIEK-GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 295
Y QN + + AL LFI M E G+ N T+A V+ AC + +H V+K
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 296 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 355
++FV + ++D Y + G + A R+F +
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIA-------------------------------MRIFGKME 467
Query: 356 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTE----------ALIPDTMIIVNVLGAC 405
+R+ V W + +GYV S+ E L + + E +L P+++ ++ +L +C
Sbjct: 468 DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSC 527
Query: 406 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 465
A + L+ GK+ HAY ++ L D + SALVDMY+KCG + + K F + ++VI
Sbjct: 528 AALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ--KNVIT 585
Query: 466 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMK 525
+NV+I Y HG +AI L + M+ +KP+ +TF+++ +AC H G+V+ G + F MK
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 526 EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQID-ATIWGAFLNACKINNNTTL 584
DY V P HYAC+VD+ GR ++++A + M +P + A W + L A +I+NN +
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEI 705
Query: 585 VKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVEN 644
+ A + L+++E + S YV LAN+Y++ G W++ +R+ M+ + K PGCSWI +
Sbjct: 706 GEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765
Query: 645 GIHVFTSGDTSHSKADAIYSTLVCLYGKL 673
+H F +GD+SH +++ + L L+ ++
Sbjct: 766 EVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 244/534 (45%), Gaps = 87/534 (16%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N ++ Y K + +FD S R+ VS+NS++S+ + + +AL+ F M +
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWE-MALEAFRCMLD--E 193
Query: 123 TIGMDEITLTTMLNLSAKLRV---VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 179
+ TL +++ + L + + GKQ+H+Y ++ +L+ F +++L+ MY K G
Sbjct: 194 NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKL 252
Query: 180 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 239
+ V G G DLV +WNT+++ Q
Sbjct: 253 ASS-KVLLGSFGGRDLV--------------------------------TWNTVLSSLCQ 279
Query: 240 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC-SNQF 298
N + AL EM+ +G+E ++ T++SVL AC+ L+ L+ GK +HA LKN N F
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 299 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 358
V S +VD YC C + V +G +R+FD + +R
Sbjct: 340 VGSALVDMYCNC------KQVLSG-------------------------RRVFDGMFDRK 368
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
+W A+ +GY +++ + LF + L+ ++ + V+ AC S + H
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 428
Query: 419 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 478
++++ L+ D + + L+DMYS+ G I A + F + DRD++ +N MI GY
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM--EDRDLVTWNTMITGYVFSEH 486
Query: 479 ENKAIQLFQEML-----------KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 527
A+ L +M ++SLKP++IT + +L +C + G++ ++
Sbjct: 487 HEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN 546
Query: 528 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNN 581
N+ ++ + +VDMY + L+ + + +IP Q + W + A ++ N
Sbjct: 547 -NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 195/461 (42%), Gaps = 82/461 (17%)
Query: 124 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALS-SLIDMYSKCGSFREA 182
I D +L A L+ + GKQ+H+++ K + ++ +L+++Y KCG F
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
Y VF D +S+ + VSWN+LI+
Sbjct: 153 YKVF-------DRISER--------------------------NQVSWNSLISSLCSFEK 179
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGL---KCLKLGKCVHALVLKNDGCSNQFV 299
E AL F M+++ +E + TL SV++AC+ L + L +GK VHA L+ G N F+
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK-GELNSFI 238
Query: 300 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 359
++L+A Y G + +K L S R+
Sbjct: 239 -------------------------------INTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 360 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 419
V W + S +++Q + RE E + PD I +VL AC+ L GK+ HA
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREM-VLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 420 YILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 478
Y L+ L+ + + SALVDMY C + + F + DR + L+N MIAGY+ +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF--DRKIGLWNAMIAGYSQNEH 384
Query: 479 ENKAIQLFQEMLK-ISLKPDAITFVALLSACRHRGLVELGEK---FFMSMKEDYNVLPEI 534
+ +A+ LF M + L ++ T ++ AC G E F + D + +
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ- 443
Query: 535 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
++DMY R +++ A+ K+ + D W +
Sbjct: 444 ---NTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITG 480
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/554 (21%), Positives = 224/554 (40%), Gaps = 122/554 (22%)
Query: 24 LASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFD 83
++S + C+ L L + G A+ L + N+F +A++ Y + R +FD
Sbjct: 305 ISSVLPACSHLEMLRT--GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 84 SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRV 143
R + +N+M++ Y+ + D AL LF M+ + + + T+ ++ +
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEH-DKEALLLFIGMEESAGLLA-NSTTMAGVVPACVRSGA 420
Query: 144 VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVA 203
+ +H ++VK D +F ++L+DMYS+ G
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG-------------------------- 454
Query: 204 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM------IEKG 257
K+D+A+ +F K E D V+WNT+I GYV + + E AL L +M + KG
Sbjct: 455 ------KIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 258 -----IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
++ N TL ++L +C L L GK +HA +KN+ ++ V S +VD Y KCG
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
++ + V FD + ++N + W + Y
Sbjct: 568 LQMSRKV-------------------------------FDQIPQKNVITWNVIIMAYGMH 596
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
+ L R + + P+ + ++V AC+ + G + Y+++ ++
Sbjct: 597 GNGQEAIDLLR-MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSS 654
Query: 433 A--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
+ +VD+ + G I ++++QL+ RD NK
Sbjct: 655 DHYACVVDLLGRAGRI---KEAYQLMNMMPRDF----------------NK--------- 686
Query: 491 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI-YHYACMVDMYGRGNQ 549
A + +LL A R +E+GE ++ + + P + HY + ++Y
Sbjct: 687 -------AGAWSSLLGASRIHNNLEIGE---IAAQNLIQLEPNVASHYVLLANIYSSAGL 736
Query: 550 LEKAVEFMRKIPIQ 563
+KA E R + Q
Sbjct: 737 WDKATEVRRNMKEQ 750
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 161/329 (48%), Gaps = 44/329 (13%)
Query: 220 KNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK 279
++PE+ W L+ V++ + A+ +++MI GI+ + + ++L A L+ ++
Sbjct: 60 RSPEW-----WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDME 114
Query: 280 LGKCVHALVLK-NDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGY 338
LGK +HA V K G + V++ +V+ Y KCG+ +VY
Sbjct: 115 LGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDF---GAVY------------------ 153
Query: 339 SSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 398
++FD +SERN V W +L S ++ E + FR E + P + +
Sbjct: 154 ----------KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCM-LDENVEPSSFTL 202
Query: 399 VNVLGACA---IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 455
V+V+ AC+ + L +GKQ HAY LR K ++ + + LV MY K G +A ++ L
Sbjct: 203 VSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSK--VLL 259
Query: 456 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 515
+ RD++ +N +++ + +A++ +EM+ ++PD T ++L AC H ++
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319
Query: 516 LGEKFFMSMKEDYNVLPEIYHYACMVDMY 544
G++ ++ ++ + + +VDMY
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMY 348
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 78/269 (28%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +K GL F N L+ +YS G + A ++F KM R+ +WN +I Y+
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF---- 483
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQ---------SARDTIGM 126
S H D AL L +MQ ++R ++
Sbjct: 484 --------SEHHED--------------------ALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 127 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKT--ANDLSKFALSSLIDMYSKCGSFREAYN 184
+ ITL T+L A L + GK++H+Y +K A D++ S+L+DMY+KCG
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA--VGSALVDMYAKCGC------ 567
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 244
+ M+ VF + P+ N ++WN +I Y +G +
Sbjct: 568 --------------------------LQMSRKVFDQIPQKN-VITWNVIIMAYGMHGNGQ 600
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLSACT 273
A+ L M+ +G++ N+ T SV +AC+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACS 629
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 308 bits (789), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 189/613 (30%), Positives = 317/613 (51%), Gaps = 71/613 (11%)
Query: 57 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 116
++ F ++ I Y + ++ +R +FDS R++ +N+M+ Y D C +++LF
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND-CLVESIELFLE 307
Query: 117 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 176
+++ + DE+T + + L+ V G+Q H ++ K +L ++SL+ MYS+C
Sbjct: 308 AIGSKEIVS-DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRC 366
Query: 177 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 236
GS +++ VF R+ D VSWNT+I+
Sbjct: 367 GSVHKSFGVF-----------------LSMRE----------------RDVVSWNTMISA 393
Query: 237 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 296
+VQNG + L L EM ++G + + T+ ++LSA + L+ ++GK HA +++ G
Sbjct: 394 FVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ-GIQF 452
Query: 297 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 356
+ ++S ++D Y K G +R ++ ++ G +GY+ E
Sbjct: 453 EGMNSYLIDMYSKSGLIRISQKLFEG-------------SGYA----------------E 483
Query: 357 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 416
R+ W ++ SGY ++ E F +FR+ + + P+ + + ++L AC+ ++ LGKQ
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKM-LEQNIRPNAVTVASILPACSQIGSVDLGKQ 542
Query: 417 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 476
H + +R L+ + +ASALVDMYSK G I YAE F +R+ + Y MI GY H
Sbjct: 543 LHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFS--QTKERNSVTYTTMILGYGQH 600
Query: 477 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 536
G +AI LF M + +KPDAITFVA+LSAC + GL++ G K F M+E YN+ P H
Sbjct: 601 GMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEH 660
Query: 537 YACMVDMYGRGNQLEKAVEFMRKIPIQID-ATIWGAFLNACKINNNTTLVKQAEEELLKV 595
Y C+ DM GR ++ +A EF++ + + + A +WG+ L +CK++ L + E L K
Sbjct: 661 YCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKF 720
Query: 596 E-ADNGSRY-VQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 653
+ N S Y V L+N+YA E KW + ++R+ MR K K G S I + ++ F S D
Sbjct: 721 DKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRD 780
Query: 654 TSHSKADAIYSTL 666
H + IY +
Sbjct: 781 QEHPHSSEIYDVI 793
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 209/481 (43%), Gaps = 96/481 (19%)
Query: 42 GLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYA 101
G Q A +LFD +P WN II+ +I +NL LF
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFI-CNNLPHEALLF------------------- 92
Query: 102 GADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDL 161
++RM+ D T ++ L A+ + + GK +H ++++ +
Sbjct: 93 ------------YSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNS 140
Query: 162 SKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKN 221
S+ +SL++MY C + + + + D+ VF N
Sbjct: 141 SRVVHNSLMNMYVSCLNAPDCF--------------------------EYDVVRKVF-DN 173
Query: 222 PEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG 281
+ V+WNTLI+ YV+ G A F M+ ++ + + +V A + + +K
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 282 KCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSK 341
+ L+LK + D Y +K F SS I+ Y+
Sbjct: 234 NVFYGLMLK------------LGDEY-----------------VKDLFVVSSAISMYAEL 264
Query: 342 GNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNV 401
G++ ++R+FDS ERN VW + YV++ +LF E ++ ++ D + +
Sbjct: 265 GDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDE--VTYL 322
Query: 402 LGACAIQA--TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL-VTD 458
L A A+ A + LG+Q H ++ + + + ++L+ MYS+CG++ KSF + ++
Sbjct: 323 LAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSV---HKSFGVFLSM 379
Query: 459 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 518
+RDV+ +N MI+ + +G +++ + L EM K K D IT ALLSA + E+G+
Sbjct: 380 RERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGK 439
Query: 519 K 519
+
Sbjct: 440 Q 440
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 187/413 (45%), Gaps = 48/413 (11%)
Query: 197 SKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEK 256
S + ++ C+DG +A +F P+ TV WNT+I G++ N AL LF ++K
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPK-PTTVLWNTIIIGFICNNLPHEAL-LFYSRMKK 98
Query: 257 GIEY---NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
+ + +T +S L AC K LK GK VH +++ S++ V + +++ Y C N
Sbjct: 99 TAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN- 157
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
A + +++FD++ +N V W L S YVK+
Sbjct: 158 --APDCF----------------------EYDVVRKVFDNMRRKNVVAWNTLISWYVKTG 193
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN----MD 429
+ + F E + P + VNV A +I + S+ K Y L KL D
Sbjct: 194 RNAEACRQFGIMMRME-VKPSPVSFVNVFPAVSI--SRSIKKANVFYGLMLKLGDEYVKD 250
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQ 487
+ S+ + MY++ G+I + + F DS +R++ ++N MI Y + ++I+LF
Sbjct: 251 LFVVSSAISMYAELGDIESSRRVF----DSCVERNIEVWNTMIGVYVQNDCLVESIELFL 306
Query: 488 EML-KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR 546
E + + D +T++ SA VELG +F + +++ LP + + MV MY R
Sbjct: 307 EAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSR 365
Query: 547 GNQLEKAVEF---MRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVE 596
+ K+ MR+ + T+ AF+ + LV + +++ K++
Sbjct: 366 CGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKID 418
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 305/602 (50%), Gaps = 72/602 (11%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N++I Y K AR +FD+ S RDL+S+NS+++ A +G + A+ LF MQ R
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA-QNGLEVEAVCLF--MQLLRC 410
Query: 123 TIGMDEITLTTMLNLSAKL-RVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFRE 181
+ D+ T+T++L ++ L + KQ+H + +K N F ++LID YS+ +E
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 182 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 241
A + ++ F D V+WN ++AGY Q+
Sbjct: 471 A---------------------------------EILFERHNF-DLVAWNAMMAGYTQSH 496
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 301
+ L LF M ++G + TLA+V C L + GK VHA +K+ + +VSS
Sbjct: 497 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 556
Query: 302 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 361
GI+D Y KCG+M A+ FA FDS+ + V
Sbjct: 557 GILDMYVKCGDMSAAQ-----------FA--------------------FDSIPVPDDVA 585
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
WT + SG +++ + E F +F + R ++PD I + A + L G+Q HA
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLM-GVLPDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 422 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 481
L+ D + ++LVDMY+KCG+I A F+ + ++ +N M+ G A HG +
Sbjct: 645 LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI--EMMNITAWNAMLVGLAQHGEGKE 702
Query: 482 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 541
+QLF++M + +KPD +TF+ +LSAC H GLV K SM DY + PEI HY+C+
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 542 DMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 601
D GR +++A + + ++ A+++ L AC++ +T K+ +LL++E + S
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 822
Query: 602 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADA 661
YV L+N+YAA KW+EM R M+G + K PG SWI V+N IH+F D S+ + +
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTEL 882
Query: 662 IY 663
IY
Sbjct: 883 IY 884
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 150/597 (25%), Positives = 255/597 (42%), Gaps = 112/597 (18%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIK---- 71
H A K GL F L+++Y G ++E LF++MP+R+ WN ++ AY++
Sbjct: 168 HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFK 227
Query: 72 --AHNLTQA-------------RALF-------------------DSASHRDLVSYNSML 97
A +L+ A R L D++S +++ N L
Sbjct: 228 EEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGL 287
Query: 98 SAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKT 157
S Y + G + L FA M + D++T ML + K+ + G+Q+H +K
Sbjct: 288 SEYLHS-GQYSALLKCFADM--VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 158 ANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNV 217
DL +SLI+MY K F A VF
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFD------------------------------ 374
Query: 218 FWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL-K 276
N D +SWN++IAG QNG A+ LF++++ G++ +Q+T+ SVL A + L +
Sbjct: 375 ---NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPE 431
Query: 277 CLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIA 336
L L K VH +K + S+ FVS+ ++D Y + M+ AE ++
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF---------------- 475
Query: 337 GYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTM 396
+ FD V W A+ +GY +S KLF + D
Sbjct: 476 ----------ERHNFD------LVAWNAMMAGYTQSHDGHKTLKLF-ALMHKQGERSDDF 518
Query: 397 IIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLV 456
+ V C ++ GKQ HAY +++ ++D ++S ++DMY KCG+++ A+ +F +
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 457 TDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVEL 516
D + + MI+G +G E +A +F +M + + PD T L A +E
Sbjct: 579 PVPDD--VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ 636
Query: 517 GEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFL 573
G + + + N + + +VDMY + ++ A ++I + ++ T W A L
Sbjct: 637 GRQIHANALK-LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAML 691
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 145/585 (24%), Positives = 249/585 (42%), Gaps = 96/585 (16%)
Query: 51 FDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDT-- 108
F++ P R F N +I Y K +LT AR +FD RDLVS+NS+L+AYA + C
Sbjct: 68 FEENPER--FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVEN 125
Query: 109 --VALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL 166
A LF ++ +D + +TL+ ML L V + H Y K D +F
Sbjct: 126 IQQAFLLFRILR--QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVA 183
Query: 167 SSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK------ 220
+L+++Y K G +E +F D+V N M+ A G + A+++
Sbjct: 184 GALVNIYLKFGKVKEGKVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGL 242
Query: 221 NP-------------------------EFNDTVSWNTLI------AGYVQNGYMERALTL 249
NP ND S + +I + Y+ +G L
Sbjct: 243 NPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKC 302
Query: 250 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 309
F +M+E +E +Q T +L+ + L LG+ VH + LK VS+ +++ YCK
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 310 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 369
+A +V FD++SER+ + W ++ +G
Sbjct: 363 LRKFGFARTV-------------------------------FDNMSERDLISWNSVIAGI 391
Query: 370 VKSQ-QCEAVFKLFREFRTTEALIPDTMIIVNVL-GACAIQATLSLGKQTHAYILRTKLN 427
++ + EAV + R L PD + +VL A ++ LSL KQ H + ++
Sbjct: 392 AQNGLEVEAVCLFMQLLRC--GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV 449
Query: 428 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
D +++AL+D YS+ + AE F+ + D++ +N M+AGY +K ++LF
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFE---RHNFDLVAWNAMMAGYTQSHDGHKTLKLFA 506
Query: 488 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFM-SMKEDYNVLPEIYHYACMVDMYGR 546
M K + D T + C + G++ ++K Y++ +++ + ++DMY +
Sbjct: 507 LMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSGILDMYVK 564
Query: 547 GNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEE 591
+ A IP+ D W ++ C ++ EEE
Sbjct: 565 CGDMSAAQFAFDSIPVP-DDVAWTTMISGC--------IENGEEE 600
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 197/473 (41%), Gaps = 87/473 (18%)
Query: 147 GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACC 206
GK H+ ++ + +F +++LI MYSKCGS A VF
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFD------------------- 98
Query: 207 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY-----MERALTLFIEMIEKGIEYN 261
K P+ D VSWN+++A Y Q+ +++A LF + + + +
Sbjct: 99 -------------KMPD-RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTS 144
Query: 262 QHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA 321
+ TL+ +L C + + H K ++FV+ +V+ Y K G ++ + ++
Sbjct: 145 RMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFE 204
Query: 322 -------------------------GIGIKSPFATSSL------------IAGYSSKGNM 344
I + S F +S L I+G S
Sbjct: 205 EMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQ 264
Query: 345 TKA-KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 403
K+ D+ S + S Y+ S Q A+ K F + ++ I+ +
Sbjct: 265 VKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLAT 324
Query: 404 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 463
A + +L+LG+Q H L+ L++ ++++L++MY K +A F + S+RD+
Sbjct: 325 AVKVD-SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM--SERDL 381
Query: 464 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH--RGLVELGEKFF 521
I +N +IAG A +G E +A+ LF ++L+ LKPD T ++L A GL +
Sbjct: 382 ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHV 441
Query: 522 MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA-VEFMRKIPIQIDATIWGAFL 573
++K N + + + ++D Y R +++A + F R D W A +
Sbjct: 442 HAIK--INNVSDSFVSTALIDAYSRNRCMKEAEILFERH---NFDLVAWNAMM 489
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 39/232 (16%)
Query: 278 LKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG 337
L LGKC HA +L + +F+ + ++ Y KCG++ Y
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTY---------------------- 92
Query: 338 YSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC-----EAVFKLFREFRTTEALI 392
A+R+FD + +R+ V W ++ + Y +S +C + F LFR R + +
Sbjct: 93 ---------ARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR-QDVVY 142
Query: 393 PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKS 452
M + +L C + + H Y + L+ DE +A ALV++Y K G + +
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 453 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVAL 504
F+ + RDV+L+N+M+ Y GF+ +AI L L P+ IT L
Sbjct: 203 FEEM--PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 35/185 (18%)
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 468
+ L LGK THA IL + N + L + L+ MYSKCG++ YA + F + DRD++ +N
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM--PDRDLVSWNS 110
Query: 469 MIAGYAHHG---FEN--KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 523
++A YA EN +A LF+ + + + +T +L C H G V E F
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF--- 167
Query: 524 MKEDYNVLPEIYHYAC-------------MVDMYGRGNQLEKAVEFMRKIPIQIDATIWG 570
+ YAC +V++Y + ++++ ++P + D +W
Sbjct: 168 -----------HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWN 215
Query: 571 AFLNA 575
L A
Sbjct: 216 LMLKA 220
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 305 bits (780), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 189/606 (31%), Positives = 301/606 (49%), Gaps = 72/606 (11%)
Query: 64 AIIMAYIKAHN-LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
++I ++K N A +FD S ++V++ M++ G A+ F M
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM-GFPREAIRFFLDM--VLS 263
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
D+ TL+++ + A+L + GKQ+HS+ +++ L SL+DMY+KC +
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG--LVDDVECSLVDMYAKCSA---- 317
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN-G 241
DG +D VF E + +SW LI GY++N
Sbjct: 318 -------------------------DGSVDDCRKVF-DRMEDHSVMSWTALITGYMKNCN 351
Query: 242 YMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 300
A+ LF EMI +G +E N T +S AC L ++GK V K SN V+
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 301 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 360
+ ++ + K M A+R F+SLSE+N V
Sbjct: 412 NSVISMFVK-------------------------------SDRMEDAQRAFESLSEKNLV 440
Query: 361 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 420
+ G ++ E FKL E T L ++L A ++ G+Q H+
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEI-TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499
Query: 421 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 480
+++ L+ ++ + +AL+ MYSKCG+I A + F + +R+VI + MI G+A HGF
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM--ENRNVISWTSMITGFAKHGFAI 557
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 540
+ ++ F +M++ +KP+ +T+VA+LSAC H GLV G + F SM ED+ + P++ HYACM
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 541 VDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 600
VD+ R L A EF+ +P Q D +W FL AC++++NT L K A ++L+++ +
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 601 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKAD 660
+ Y+QL+N+YA GKW E +R++M+ + K GCSWI V + IH F GDT+H A
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 737
Query: 661 AIYSTL 666
IY L
Sbjct: 738 QIYDEL 743
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 229/509 (44%), Gaps = 91/509 (17%)
Query: 20 IKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQAR 79
+KS + + F +L+H I FD P ++ +N++I Y K+ + +A
Sbjct: 69 LKSCIRARDFRLGKLVHARLIE---------FDIEP--DSVLYNSLISLYSKSGDSAKAE 117
Query: 80 ALFDSASH---RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGM--DEITLTTM 134
+F++ RD+VS+++M++ Y G +G + A+ +F +G+ ++ T +
Sbjct: 118 DVFETMRRFGKRDVVSWSAMMACY-GNNGRELDAIKVFVEFLE----LGLVPNDYCYTAV 172
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALS-SLIDMYSKC-GSFREAYNVFSGCDGV 192
+ + V G+ +++KT + S + SLIDM+ K SF AY VF
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFD----- 227
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
K E N V+W +I +Q G+ A+ F++
Sbjct: 228 ---------------------------KMSELN-VVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
M+ G E ++ TL+SV SAC L+ L LGK +H+ +++ + V +VD Y KC
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKC-- 315
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
S+ G++ +++FD + + + + WTAL +GY+K+
Sbjct: 316 --------------------------SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 373 QQ--CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 430
EA+ LF E T + P+ + AC + +GKQ + L +
Sbjct: 350 CNLATEAI-NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 431 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
+A++++ M+ K + A+++F+ + S+++++ YN + G + +A +L E+
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESL--SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 491 KISLKPDAITFVALLSACRHRGLVELGEK 519
+ L A TF +LLS + G + GE+
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 45/266 (16%)
Query: 11 VVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYI 70
++ + HV+ +S+ C L +L +A F + N+ N++I ++
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA---FKRGLASNSSVANSVISMFV 419
Query: 71 KAHNLTQARALFDSASHRDLVSYNSMLSAYAGADG-CDTVALDLFARMQS--ARDTIGMD 127
K+ + A+ F+S S ++LVSYN+ L DG C + + ++ S +G+
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFL------DGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 128 EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS 187
T ++L+ A + + G+Q+HS +VK ++ ++LI MYSKCGS A VF+
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 188 GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERAL 247
F +N + +SW ++I G+ ++G+ R L
Sbjct: 534 ------------------------------FMEN---RNVISWTSMITGFAKHGFAIRVL 560
Query: 248 TLFIEMIEKGIEYNQHTLASVLSACT 273
F +MIE+G++ N+ T ++LSAC+
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACS 586
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 394 DTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF 453
D++ ++L +C LGK HA ++ + D L ++L+ +YSK G+ A AE F
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 454 QLVTD-SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 512
+ + RDV+ ++ M+A Y ++G E AI++F E L++ L P+ + A++ AC +
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 513 LVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRG-NQLEKAVEFMRKIPIQIDATIWGA 571
V +G + + + ++ ++DM+ +G N E A + K+ +++ W
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWTL 239
Query: 572 FLNAC 576
+ C
Sbjct: 240 MITRC 244
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 136/296 (45%), Gaps = 40/296 (13%)
Query: 231 NTLIAGYVQNGYMERALTLFIEMIEKGIE-YNQHTLASVLSACTGLKCLKLGKCVHALVL 289
+ LI ++ G + A++ M GI + T +S+L +C + +LGK VHA
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHAR-- 87
Query: 290 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 349
+++F + ++ Y +SLI+ YS G+ KA+
Sbjct: 88 -------------LIEFDIEPDSVLY----------------NSLISLYSKSGDSAKAED 118
Query: 350 LFDSL---SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 406
+F+++ +R+ V W+A+ + Y + + K+F EF L+P+ V+ AC+
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL-GLVPNDYCYTAVIRACS 177
Query: 407 IQATLSLGKQTHAYILRT-KLNMDEKLASALVDMYSKCGN-IAYAEKSFQLVTDSDRDVI 464
+ +G+ T ++++T D + +L+DM+ K N A K F + S+ +V+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM--SELNVV 235
Query: 465 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF 520
+ +MI GF +AI+ F +M+ + D T ++ SAC + LG++
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/613 (28%), Positives = 314/613 (51%), Gaps = 70/613 (11%)
Query: 55 PHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 114
P ++ +I++Y + + +AR+LFD RD+V++ +M++ YA ++ + A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSN-YNARAWECF 99
Query: 115 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 174
M + +E TL+++L ++V+ YG +H +VK + S + +++++MY+
Sbjct: 100 HEM--VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 175 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 234
C M AAC + +++ + + V+W TLI
Sbjct: 158 TCSV---------------------TMEAAC-----------LIFRDIKVKNDVTWTTLI 185
Query: 235 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC 294
G+ G L ++ +M+ + E + + + A + + GK +HA V+K
Sbjct: 186 TGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQ 245
Query: 295 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 354
SN V + I+D YC+CG + ++AK F +
Sbjct: 246 SNLPVMNSILDLYCRCGYL-------------------------------SEAKHYFHEM 274
Query: 355 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 414
+++ + W L S +S EA+ +F+ F + + +P+ +++ ACA A L+ G
Sbjct: 275 EDKDLITWNTLISELERSDSSEALL-MFQRFES-QGFVPNCYTFTSLVAACANIAALNCG 332
Query: 415 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 474
+Q H I R N + +LA+AL+DMY+KCGNI +++ F + D R+++ + M+ GY
Sbjct: 333 QQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR-RNLVSWTSMMIGYG 391
Query: 475 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 534
HG+ +A++LF +M+ ++PD I F+A+LSACRH GLVE G K+F M+ +Y + P+
Sbjct: 392 SHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDR 451
Query: 535 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQ-AEEELL 593
Y C+VD+ GR ++ +A E + ++P + D + WGA L ACK + + L+ + A +++
Sbjct: 452 DIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVM 511
Query: 594 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 653
+++ YV L+ +YAAEGKW + R+RK MR K G SWI VEN + F D
Sbjct: 512 ELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSD 571
Query: 654 TSHSKADAIYSTL 666
A ++YS L
Sbjct: 572 KMCPNASSVYSVL 584
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 267/498 (53%), Gaps = 45/498 (9%)
Query: 167 SSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFND 226
S LI + EA+ +F D S N M++ R+ + A + F + P F D
Sbjct: 97 SLLIGISKDPSRMMEAHQLFDEIPEP-DTFSYNIMLSCYVRNVNFEKAQSFFDRMP-FKD 154
Query: 227 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 286
SWNT+I GY + G ME+A LF M+EK
Sbjct: 155 AASWNTMITGYARRGEMEKARELFYSMMEK------------------------------ 184
Query: 287 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTK 346
N+ + ++ Y +CG++ A + ++ A +++I GY +
Sbjct: 185 ---------NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVEL 235
Query: 347 AKRLFDSLS-ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGAC 405
A+ +F ++ +N V W A+ SGYV++ + E KLFR E + P++ + + L C
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM-LEEGIRPNSSGLSSALLGC 294
Query: 406 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 465
+ + L LG+Q H + ++ L D ++L+ MY KCG + A K F+++ +DV+
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM--KKKDVVA 352
Query: 466 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMK 525
+N MI+GYA HG +KA+ LF+EM+ ++PD ITFVA+L AC H GLV +G +F SM
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412
Query: 526 EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLV 585
DY V P+ HY CMVD+ GR +LE+A++ +R +P + A ++G L AC+++ N L
Sbjct: 413 RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELA 472
Query: 586 KQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENG 645
+ A E+LL++ + N + YVQLAN+YA++ +W ++ R+RK M+ K+PG SWI + N
Sbjct: 473 EFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNK 532
Query: 646 IHVFTSGDTSHSKADAIY 663
+H F S D H + D+I+
Sbjct: 533 VHHFRSSDRIHPELDSIH 550
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 208/496 (41%), Gaps = 113/496 (22%)
Query: 25 ASSIFTCNQL-IHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFD 83
A + T N L I + + EAH+LFD++P + FS+N ++ Y++ N +A++ FD
Sbjct: 89 AKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFD 148
Query: 84 SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRV 143
+D S+N+M++ YA M+ AR+
Sbjct: 149 RMPFKDAASWNTMITGYARR-----------GEMEKARELF------------------- 178
Query: 144 VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVA 203
Y + N++S +++I Y +CG +A + F V +V+ AM+
Sbjct: 179 ---------YSMMEKNEVS---WNAMISGYIECGDLEKASHFFK-VAPVRGVVAWTAMIT 225
Query: 204 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 263
+ K+++A +F + V+WN +I+GYV+N E L LF M+E+GI N
Sbjct: 226 GYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSS 285
Query: 264 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 323
L+S L C+ L L+LG+ +H +V K+ C++ + ++ YCKCG + A ++ +
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 324 GIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFR 383
K A +++I+GY+ GN K ALC LFR
Sbjct: 346 KKKDVVAWNAMISGYAQHGNADK-----------------ALC--------------LFR 374
Query: 384 EFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT-KLNMDEKLASALVDMYSK 442
E + PD + V VL AC +++G ++R K+ + +VD+ +
Sbjct: 375 EM-IDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGR 433
Query: 443 CGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 502
G + +A++L + M +P A F
Sbjct: 434 AGKL---------------------------------EEALKLIRSM---PFRPHAAVFG 457
Query: 503 ALLSACRHRGLVELGE 518
LL ACR VEL E
Sbjct: 458 TLLGACRVHKNVELAE 473
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 310/599 (51%), Gaps = 51/599 (8%)
Query: 75 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTV-ALDLFARMQSARDTIGM--DEITL 131
L A ++F + +L+ +N+M +A + D V AL L+ M S +G+ + T
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSS--DPVSALKLYVCMIS----LGLLPNSYTF 137
Query: 132 TTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG 191
+L AK + G+Q+H +++K DL + +SLI MY + G +A+ VF
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197
Query: 192 VVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFI 251
D+VS A++ G ++ A +F + P D VSWN +I+GY + G + AL LF
Sbjct: 198 R-DVVSYTALIKGYASRGYIENAQKLFDEIP-VKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 252 EMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCG 311
+M++ + ++ T+ +V+SAC ++LG+ VH + + SN + + ++D Y KCG
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 312 NMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK 371
+ A LF+ L ++ + W L GY
Sbjct: 316 ELETACG-------------------------------LFERLPYKDVISWNTLIGGYTH 344
Query: 372 SQQCEAVFKLFRE-FRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI---LRTKLN 427
+ LF+E R+ E P+ + ++++L ACA + +G+ H YI L+ N
Sbjct: 345 MNLYKEALLLFQEMLRSGET--PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 402
Query: 428 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
L ++L+DMY+KCG+I A + F + + + +N MI G+A HG + + LF
Sbjct: 403 ASS-LRTSLIDMYAKCGDIEAAHQVFNSILH--KSLSSWNAMIFGFAMHGRADASFDLFS 459
Query: 488 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRG 547
M KI ++PD ITFV LLSAC H G+++LG F +M +DY + P++ HY CM+D+ G
Sbjct: 460 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHS 519
Query: 548 NQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLA 607
++A E + + ++ D IW + L ACK++ N L + E L+K+E +N YV L+
Sbjct: 520 GLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLS 579
Query: 608 NVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
N+YA+ G+WNE+ + R + K K+PGCS I +++ +H F GD H + IY L
Sbjct: 580 NIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 152/568 (26%), Positives = 249/568 (43%), Gaps = 121/568 (21%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +K G ++ LI +Y +G L++AHK+FDK PHR+ S+ A+I Y +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A+ LFD +D+VS+N+M+S YA G AL+LF M + + DE T+ T++
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYA-ETGNYKEALELFKDMM--KTNVRPDESTMVTVV 273
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ A+ + G+Q+H ++ + +++LID+YSKC
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC------------------- 314
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
G+++ A +F + P + D +SWNTLI GY + AL LF EM+
Sbjct: 315 -------------GELETACGLFERLP-YKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN-DGCSN-QFVSSGIVDFYCKCGNM 313
G N T+ S+L AC L + +G+ +H + K G +N + + ++D Y KCG++
Sbjct: 361 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 420
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
A V F+S+ ++ W A+ G+
Sbjct: 421 EAAHQV-------------------------------FNSILHKSLSSWNAMIFGFAMHG 449
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
+ +A F LF R + PD + V +L AC+ L LG+ +I RT + D K+
Sbjct: 450 RADASFDLFSRMRKI-GIQPDDITFVGLLSACSHSGMLDLGR----HIFRT-MTQDYKMT 503
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
L Y MI H G +A ++ M
Sbjct: 504 PKLEH---------------------------YGCMIDLLGHSGLFKEAEEMINMM---E 533
Query: 494 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE-IYHYACMVDMY---GRGNQ 549
++PD + + +LL AC+ G VELGE F ++ + PE Y + ++Y GR N+
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAENL---IKIEPENPGSYVLLSNIYASAGRWNE 590
Query: 550 LEKAVEF-----MRKIP----IQIDATI 568
+ K M+K+P I+ID+ +
Sbjct: 591 VAKTRALLNDKGMKKVPGCSSIEIDSVV 618
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 217/725 (29%), Positives = 344/725 (47%), Gaps = 116/725 (16%)
Query: 14 RDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAH 73
R + IK+G + N ++ G + A K++D+MPH+N S N +I ++K
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 74 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
+++ AR LFD+ R +V++ ++ YA D A LF +M + D +T TT
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDE-AFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 134 ML---NLSAKLRVVCYGKQMHSYMVKTANDLSKF-------------------------- 164
+L N + V Q+H++ VK D + F
Sbjct: 153 LLPGCNDAVPQNAV---GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 165 -------ALSSLIDMYSKCGSFREAYNVF-----SG-------CDGVVDLV--------- 196
++LI Y K G + E+ ++F SG GV+ V
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 197 ------------SKNAMVAACCRD--GKMDMALN---VFWKNPEFNDTVSWNTLIAGYVQ 239
S++A V D K D L +F + PE D VS+N +I+ Y Q
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL-DFVSYNVVISSYSQ 328
Query: 240 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 299
E +L F EM G + A++LS L L++G+ +H L S V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 300 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 359
+ +VD Y KC AE + F SL +R
Sbjct: 389 GNSLVDMYAKCEMFEEAELI-------------------------------FKSLPQRTT 417
Query: 360 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 419
V WTAL SGYV+ A KLF + R + L D VL A A A+L LGKQ HA
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSN-LRADQSTFATVLKASASFASLLLGKQLHA 476
Query: 420 YILRTKLNMDEKLA-SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 478
+I+R+ N++ + S LVDMY+KCG+I A + F+ + DR+ + +N +I+ +A +G
Sbjct: 477 FIIRSG-NLENVFSGSGLVDMYAKCGSIKDAVQVFEEM--PDRNAVSWNALISAHADNGD 533
Query: 479 ENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYA 538
AI F +M++ L+PD+++ + +L+AC H G VE G ++F +M Y + P+ HYA
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 539 CMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEA- 597
CM+D+ GR + +A + M ++P + D +W + LNAC+I+ N +L ++A E+L +E
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKL 653
Query: 598 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 657
+ + YV ++N+YAA G+W ++ ++K MR + K+P SW+ V + IHVF+S D +H
Sbjct: 654 RDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHP 713
Query: 658 KADAI 662
D I
Sbjct: 714 NGDEI 718
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 190/584 (32%), Positives = 312/584 (53%), Gaps = 48/584 (8%)
Query: 90 LVSYNSMLSAYAGADGCD-TVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGK 148
L+ YN ML + A DG T L LF ++ + D TL +L +LR V G+
Sbjct: 11 LLMYNKMLKSLA--DGKSFTKVLALFGELRG--QGLYPDNFTLPVVLKSIGRLRKVIEGE 66
Query: 149 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRD 208
++H Y VK + + +SL+ MY+ G
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLG------------------------------- 95
Query: 209 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI-EKGIEYNQHTLAS 267
K+++ VF + P+ D VSWN LI+ YV NG E A+ +F M E +++++ T+ S
Sbjct: 96 -KIEITHKVFDEMPQ-RDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVS 153
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
LSAC+ LK L++G+ ++ V+ S + + + +VD +CKCG + A +V+ + K+
Sbjct: 154 TLSACSALKNLEIGERIYRFVVTEFEMSVR-IGNALVDMFCKCGCLDKARAVFDSMRDKN 212
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 387
+S++ GY S G + +A+ LF+ ++ V+WTA+ +GYV+ + + +LFR +T
Sbjct: 213 VKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQT 272
Query: 388 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 447
+ PD ++V++L CA L GK H YI ++ +D+ + +ALVDMY+KCG I
Sbjct: 273 A-GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIE 331
Query: 448 YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 507
A + F + +RD + +I G A +G +A+ L+ EM + ++ DAITFVA+L+A
Sbjct: 332 TALEVFYEI--KERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
Query: 508 CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDAT 567
C H G V G K F SM E +NV P+ H +C++D+ R L++A E + K+ + D T
Sbjct: 390 CNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDET 449
Query: 568 ---IWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRK 624
++ + L+A + N + ++ E+L KVE + S + LA+VYA+ +W ++ +R+
Sbjct: 450 LVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRR 509
Query: 625 EMRGKEATKLPGCSWIYVENGIHVFTSGDT--SHSKADAIYSTL 666
+M+ K PGCS I ++ H F GD SH K D I S L
Sbjct: 510 KMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 224/502 (44%), Gaps = 76/502 (15%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H A+K+GL + N L+ +Y+ G ++ HK+FD+MP
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQ------------------- 109
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
RD+VS+N ++S+Y G +G A+ +F RM S + DE T+ + L
Sbjct: 110 ------------RDVVSWNGLISSYVG-NGRFEDAIGVFKRM-SQESNLKFDEGTIVSTL 155
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + L+ + G++++ ++V T ++S ++L+DM+ KCG +A VF D + D
Sbjct: 156 SACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVF---DSMRDK 211
Query: 196 VSK--NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
K +MV G++D A +F ++P D V W ++ GYVQ + AL LF M
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEARVLFERSP-VKDVVLWTAMMNGYVQFNRFDEALELFRCM 270
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
GI + L S+L+ C L+ GK +H + +N ++ V + +VD Y KCG +
Sbjct: 271 QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCI 330
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
A V F + ER+ WT+L G +
Sbjct: 331 ETALEV-------------------------------FYEIKERDTASWTSLIYGLAMNG 359
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT-HAYILRTKLNMDEKL 432
L+ E + D + V VL AC ++ G++ H+ R + +
Sbjct: 360 MSGRALDLYYEMENVGVRL-DAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEH 418
Query: 433 ASALVDMYSKCGNIAYAEKSF-QLVTDSDRDVI-LYNVMIAGYAHHGFENKAIQLFQEML 490
S L+D+ + G + AE+ ++ +SD ++ +Y +++ ++G A ++ +++
Sbjct: 419 CSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLE 478
Query: 491 KISLK-PDAITFVALLSACRHR 511
K+ + A T +A + A +R
Sbjct: 479 KVEVSDSSAHTLLASVYASANR 500
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 168/368 (45%), Gaps = 44/368 (11%)
Query: 27 SIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSAS 86
S+ N L+ ++ G L +A +FD M +N W +++ Y+ + +AR LF+ +
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP 240
Query: 87 HRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCY 146
+D+V + +M++ Y + D AL+LF MQ+A I D L ++L A+ +
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDE-ALELFRCMQTA--GIRPDNFVLVSLLTGCAQTGALEQ 297
Query: 147 GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACC 206
GK +H Y+ + + K ++L+DMY+KCG
Sbjct: 298 GKWIHGYINENRVTVDKVVGTALVDMYAKCGC---------------------------- 329
Query: 207 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLA 266
++ AL VF++ E DT SW +LI G NG RAL L+ EM G+ + T
Sbjct: 330 ----IETALEVFYEIKE-RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFV 384
Query: 267 SVLSACTGLKCLKLG-KCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGI 325
+VL+AC + G K H++ +++ S ++D C+ G + AE + +
Sbjct: 385 AVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRG 444
Query: 326 KSPFAT----SSLIAGYSSKGNMTKAKRLFDSLSE---RNYVVWTALCSGYVKSQQCEAV 378
+S SL++ + GN+ A+R+ + L + + T L S Y + + E V
Sbjct: 445 ESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDV 504
Query: 379 FKLFREFR 386
+ R+ +
Sbjct: 505 TNVRRKMK 512
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 181/619 (29%), Positives = 327/619 (52%), Gaps = 46/619 (7%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTV-ALDLFAR 116
+ F N+++ Y++ + +A +LF +DLVS+N +++ YA C+ A LF
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS--NCEWFKAFQLFHN 319
Query: 117 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL-SSLIDMYSK 175
+ D + D +T+ ++L + A+L + GK++HSY+++ + L ++ ++LI Y++
Sbjct: 320 LVHKGD-VSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 176 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 235
G AY FS L+S D +SWN ++
Sbjct: 379 FGDTSAAYWAFS-------LMSTK--------------------------DIISWNAILD 405
Query: 236 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 295
+ + + L L ++ + I + T+ S+L C ++ + K VH +K
Sbjct: 406 AFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLH 465
Query: 296 NQF---VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLF 351
++ + + ++D Y KCGN+ YA ++ G+ + + +SL++GY + G+ A+ LF
Sbjct: 466 DEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLF 525
Query: 352 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 411
+S + W+ + Y +S +FRE + + P+T+ I+N+L CA A+L
Sbjct: 526 TEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA-RGMRPNTVTIMNLLPVCAQLASL 584
Query: 412 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 471
L +Q H YI+R L D +L L+D+Y+KCG++ +A FQ +D+ RD++++ M+A
Sbjct: 585 HLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQ--SDARRDLVMFTAMVA 641
Query: 472 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVL 531
GYA HG +A+ ++ M + ++KPD + +L+AC H GL++ G + + S++ + +
Sbjct: 642 GYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMK 701
Query: 532 PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEE 591
P + YAC VD+ RG +L+ A F+ ++P++ +A IWG L AC N L
Sbjct: 702 PTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANH 761
Query: 592 LLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTS 651
LL+ E+D+ +V ++N+YAA+ KW + +R M+ KE K GCSW+ V+ +VF S
Sbjct: 762 LLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVS 821
Query: 652 GDTSHSKADAIYSTLVCLY 670
GD SH + D+I+ + LY
Sbjct: 822 GDCSHPRRDSIFDLVNALY 840
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 198/451 (43%), Gaps = 75/451 (16%)
Query: 64 AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT 123
+++ Y K + + +F D V +N +L+ + + G +T + F M A D
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRET--MRFFKAMHFA-DE 117
Query: 124 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG-SFREA 182
+T +L L +L GK MHSY++K + ++L+ MY+K G F +A
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
Y F DG+ D D VSWN +IAG+ +N
Sbjct: 178 YTAF---DGIAD------------------------------KDVVSWNAIIAGFSENNM 204
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLK---CLKLGKCVHALVLKNDGCSNQ-F 298
M A F M+++ E N T+A+VL C + + G+ +H+ V++ F
Sbjct: 205 MADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVF 264
Query: 299 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 358
V + +V FY + G + +A LF + ++
Sbjct: 265 VCNSLVSFYLRVGRIE-------------------------------EAASLFTRMGSKD 293
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
V W + +GY + + F+LF + PD++ I+++L CA L+ GK+ H
Sbjct: 294 LVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIH 353
Query: 419 AYILR-TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 477
+YILR + L D + +AL+ Y++ G+ + A +F L+ S +D+I +N ++ +A
Sbjct: 354 SYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLM--STKDIISWNAILDAFADSP 411
Query: 478 FENKAIQLFQEMLKISLKPDAITFVALLSAC 508
+ + + L +L ++ D++T ++LL C
Sbjct: 412 KQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 202/433 (46%), Gaps = 31/433 (7%)
Query: 11 VVYRDHVQAIKSGLASSIFTCNQLIHLYS---IHG-LLQEAHKLFDKMPHRNAFSWNAII 66
+V++ V + S + C QL L S IH +L+ ++ L D NA+I
Sbjct: 320 LVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTS------VGNALI 373
Query: 67 MAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSAR--DTI 124
Y + + + A F S +D++S+N++L A+A D+ F + + I
Sbjct: 374 SFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA-----DSPKQFQFLNLLHHLLNEAI 428
Query: 125 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTA--NDLSKFAL-SSLIDMYSKCGSFRE 181
+D +T+ ++L ++ + K++H Y VK +D + L ++L+D Y+KCG+
Sbjct: 429 TLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEY 488
Query: 182 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 241
A+ +F G LVS N++++ G D A +F + D +W+ ++ Y ++
Sbjct: 489 AHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMST-TDLTTWSLMVRIYAESC 547
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 301
A+ +F E+ +G+ N T+ ++L C L L L + H +++ G + +
Sbjct: 548 CPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRG-GLGDIRLKG 606
Query: 302 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN--- 358
++D Y KCG++++A SV+ + ++++AGY+ G +A ++ ++E N
Sbjct: 607 TLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKP 666
Query: 359 -YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 417
+V T + + + + +++ RT + P TM ACA+ G+
Sbjct: 667 DHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKP-TMEQY----ACAVDLIARGGRLD 721
Query: 418 HAYILRTKLNMDE 430
AY T++ ++
Sbjct: 722 DAYSFVTQMPVEP 734
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 102/253 (40%), Gaps = 35/253 (13%)
Query: 257 GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 316
G + V+ AC + L G+ +H V K + VS +++ Y KC M
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM--- 72
Query: 317 ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE 376
+++F + + VVW + +G S E
Sbjct: 73 ----------------------------DDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRE 104
Query: 377 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 436
+ + F+ + P ++ VL C GK H+YI++ L D + +AL
Sbjct: 105 TM-RFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNAL 163
Query: 437 VDMYSKCGNI-AYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
V MY+K G I A +F + +D+DV+ +N +IAG++ + A + F MLK +
Sbjct: 164 VSMYAKFGFIFPDAYTAFDGI--ADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTE 221
Query: 496 PDAITFVALLSAC 508
P+ T +L C
Sbjct: 222 PNYATIANVLPVC 234
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 185/606 (30%), Positives = 303/606 (50%), Gaps = 71/606 (11%)
Query: 65 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 124
++ Y+K T AR +FD RD VSYN+M+ Y + + + D
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL----DQF 303
Query: 125 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 184
D +T++++L LR + K +++YM+K L + LID+Y+KCG A +
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 244
VF N+M E DTVSWN++I+GY+Q+G +
Sbjct: 364 VF------------NSM---------------------ECKDTVSWNSIISGYIQSGDLM 390
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 304
A+ LF M+ + + T ++S T L LK GK +H+ +K+ C + VS+ ++
Sbjct: 391 EAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALI 450
Query: 305 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 364
D Y KCG + G+ K +F S+ + V W
Sbjct: 451 DMYAKCGEV----------------------------GDSLK---IFSSMGTGDTVTWNT 479
Query: 365 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 424
+ S V+ ++ + R +E ++PD + L CA A LGK+ H +LR
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSE-VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 425 KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 484
+ ++ +AL++MYSKCG + + + F+ + S RDV+ + MI Y +G KA++
Sbjct: 539 GYESELQIGNALIEMYSKCGCLENSSRVFERM--SRRDVVTWTGMIYAYGMYGEGEKALE 596
Query: 485 LFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY 544
F +M K + PD++ F+A++ AC H GLV+ G F MK Y + P I HYAC+VD+
Sbjct: 597 TFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLL 656
Query: 545 GRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYV 604
R ++ KA EF++ +PI+ DA+IW + L AC+ + + ++ ++++ D+ +
Sbjct: 657 SRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSI 716
Query: 605 QLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYS 664
+N YAA KW+++ IRK ++ K TK PG SWI V +HVF+SGD S +++AIY
Sbjct: 717 LASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYK 776
Query: 665 TLVCLY 670
+L LY
Sbjct: 777 SLEILY 782
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 133/564 (23%), Positives = 240/564 (42%), Gaps = 105/564 (18%)
Query: 14 RDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKM-PHRNAFSWNAIIMAYIKA 72
R H I GL SS F +LI YS + +F ++ P +N + WN+II A+ K
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK- 83
Query: 73 HNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLT 132
+G AL+ + +++ ++ + D+ T
Sbjct: 84 -------------------------------NGLFPEALEFYGKLRESK--VSPDKYTFP 110
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
+++ A L G ++ ++ + F ++L+DMYS
Sbjct: 111 SVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYS------------------ 152
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
R G + A VF + P D VSWN+LI+GY +GY E AL ++ E
Sbjct: 153 --------------RMGLLTRARQVFDEMP-VRDLVSWNSLISGYSSHGYYEEALEIYHE 197
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
+ I + T++SVL A L +K G+ +H LK+ S V++G+V Y K
Sbjct: 198 LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK--- 254
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
+ P T A+R+FD + R+ V + + GY+K
Sbjct: 255 ------------FRRP----------------TDARRVFDEMDVRDSVSYNTMICGYLKL 286
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
+ E ++F E + PD + + +VL AC LSL K + Y+L+ ++ +
Sbjct: 287 EMVEESVRMFLE--NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTV 344
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
+ L+D+Y+KCG++ A F + +D + +N +I+GY G +A++LF+ M+ +
Sbjct: 345 RNILIDVYAKCGDMITARDVFN--SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIM 402
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
+ D IT++ L+S ++ G K S + ++ ++DMY + ++
Sbjct: 403 EEQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGD 461
Query: 553 AVEFMRKIPIQIDATIWGAFLNAC 576
+++ + D W ++AC
Sbjct: 462 SLKIFSSMGTG-DTVTWNTVISAC 484
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 184/459 (40%), Gaps = 107/459 (23%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N +I Y K ++ AR +F+S +D VS+NS++S Y + G A+ LF M +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQS-GDLMEAMKLFKMMMIMEE 404
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
D IT ++++S +L + +GK +HS +K+ + ++LIDMY+KCG ++
Sbjct: 405 Q--ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
+FS G D V+ N +++AC R G L V
Sbjct: 463 LKIFSSM-GTGDTVTWNTVISACVRFGDFATGLQV------------------------- 496
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
+M + + + T L C L +LGK +H +L+ S + +
Sbjct: 497 -------TTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
+++ Y KCG + + R+F+ +S R+ V W
Sbjct: 550 LIEMYSKCGCLE-------------------------------NSSRVFERMSRRDVVTW 578
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
T + Y + E + F + + ++PD+++ + ++ AC+ + G +
Sbjct: 579 TGMIYAYGMYGEGEKALETFADMEKS-GIVPDSVVFIAIIYACSHSGLVDEGLACFEK-M 636
Query: 423 RTKLNMDEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 480
+T +D + + +VD+ S+ I+ AE+ Q
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ-------------------------- 670
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 519
+ +KPDA + ++L ACR G +E E+
Sbjct: 671 ----------AMPIKPDASIWASVLRACRTSGDMETAER 699
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query: 312 NMRYAESVYAGIGIKSP-FATSSLIAGYSSKGNMTKAKRLFDSLSE-RNYVVWTALCSGY 369
+R ++ +G+ S F + LI YS + +F +S +N +W ++ +
Sbjct: 22 ELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAF 81
Query: 370 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 429
K+ + + + R ++ + PD +V+ ACA +G + IL D
Sbjct: 82 SKNGLFPEALEFYGKLRESK-VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESD 140
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 489
+ +ALVDMYS+ G + A + F + RD++ +N +I+GY+ HG+ +A++++ E+
Sbjct: 141 LFVGNALVDMYSRMGLLTRARQVFDEMP--VRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 490 LKISLKPDAITFVALLSACRHRGLVELGE 518
+ PD+ T ++L A + +V+ G+
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
Query: 415 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 474
++ HA ++ L+ + + L+D YS A + F+ V+ + ++V L+N +I ++
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA-KNVYLWNSIIRAFS 82
Query: 475 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 534
+G +A++ + ++ + + PD TF +++ AC E+G+ + + D ++
Sbjct: 83 KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL-DMGFESDL 141
Query: 535 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
+ +VDMY R L +A + ++P++ D W + ++
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISG 181
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 187/604 (30%), Positives = 299/604 (49%), Gaps = 69/604 (11%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N ++ Y + +L A LFD S + VS +M+SAYA G A+ LF+ M ++ D
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYA-EQGILDKAVGLFSGMLASGD 180
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
TT+L R + +G+Q+H+++++ + + +++MY KCG A
Sbjct: 181 KPPSS--MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGA 238
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
VF MA+ K P V+ L+ GY Q G
Sbjct: 239 KRVFD------------------------QMAV----KKP-----VACTGLMVGYTQAGR 265
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
AL LF++++ +G+E++ + VL AC L+ L LGK +HA V K S V +
Sbjct: 266 ARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTP 325
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
+VDFY KC + A R F + E N V W
Sbjct: 326 LVDFYIKCSSFE-------------------------------SACRAFQEIREPNDVSW 354
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
+A+ SGY + Q E K F+ R+ A I ++ ++ AC++ A ++G Q HA +
Sbjct: 355 SAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAI 414
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
+ L + SAL+ MYSKCG + A + F+ + + D ++ + I+G+A++G ++A
Sbjct: 415 KRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPD--IVAWTAFISGHAYYGNASEA 472
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 542
++LF++M+ +KP+++TF+A+L+AC H GLVE G+ +M YNV P I HY CM+D
Sbjct: 473 LRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMID 532
Query: 543 MYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 602
+Y R L++A++FM+ +P + DA W FL+ C + N L + A EEL +++ ++ +
Sbjct: 533 IYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAG 592
Query: 603 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 662
YV N+Y GKW E + K M + K CSWI + IH F GD H + I
Sbjct: 593 YVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEI 652
Query: 663 YSTL 666
Y L
Sbjct: 653 YEKL 656
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 143/345 (41%), Gaps = 37/345 (10%)
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
+ A EM + G+ + ++ + AC L+ L G+ +H + + + +
Sbjct: 64 LNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNC 123
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
++ YC+C ++ A +LFD +SE N V
Sbjct: 124 VLQMYCECRSLE-------------------------------DADKLFDEMSELNAVSR 152
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
T + S Y + + LF + P +M +L + L G+Q HA+++
Sbjct: 153 TTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMY-TTLLKSLVNPRALDFGRQIHAHVI 211
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
R L + + + +V+MY KCG + A++ F + + V +M+ GY G A
Sbjct: 212 RAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA-VKKPVACTGLMV-GYTQAGRARDA 269
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 542
++LF +++ ++ D+ F +L AC + LG++ + + + E+ +VD
Sbjct: 270 LKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK-LGLESEVSVGTPLVD 328
Query: 543 MYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA-CKINNNTTLVK 586
Y + + E A ++I D + W A ++ C+++ VK
Sbjct: 329 FYIKCSSFESACRAFQEIREPNDVS-WSAIISGYCQMSQFEEAVK 372
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/691 (28%), Positives = 340/691 (49%), Gaps = 71/691 (10%)
Query: 3 SLIVRDALVVYRDHVQA--IKSGLASSIFTCNQLIHLYSIHG--LLQEAHKLFDKMPHRN 58
SL+ + L+++ +QA I +GL F ++LI ++ L + K+ + + N
Sbjct: 58 SLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPN 117
Query: 59 AFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQ 118
FSWN I + ++ N ++ L Y ML GC D F
Sbjct: 118 IFSWNVTIRGFSESENPKESFLL-----------YKQMLR-----HGCCESRPDHF---- 157
Query: 119 SARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGS 178
T + + A LR+ G + +++K +L ++ I M++ CG
Sbjct: 158 -----------TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGD 206
Query: 179 FREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV 238
M+ A VF ++P D VSWN LI GY
Sbjct: 207 --------------------------------MENARKVFDESP-VRDLVSWNCLINGYK 233
Query: 239 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 298
+ G E+A+ ++ M +G++ + T+ ++S+C+ L L GK + V +N
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 299 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 358
+ + ++D + KCG++ A ++ + ++ + +++I+GY+ G + +++LFD + E++
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
V+W A+ G V++++ + LF+E +T+ PD + +++ L AC+ L +G H
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK-PDEITMIHCLSACSQLGALDVGIWIH 412
Query: 419 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 478
YI + L+++ L ++LVDMY+KCGNI+ A F + R+ + Y +I G A HG
Sbjct: 413 RYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI--QTRNSLTYTAIIGGLALHGD 470
Query: 479 ENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYA 538
+ AI F EM+ + PD ITF+ LLSAC H G+++ G +F MK +N+ P++ HY+
Sbjct: 471 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYS 530
Query: 539 CMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEAD 598
MVD+ GR LE+A M +P++ DA +WGA L C+++ N L ++A ++LL+++
Sbjct: 531 IMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPS 590
Query: 599 NGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSK 658
+ YV L +Y W + R R+ M + K+PGCS I V + F D S +
Sbjct: 591 DSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPE 650
Query: 659 ADAIYSTLVCLYGKLYLTFTELKQLDEIQGN 689
++ IY L CL + + + L EI N
Sbjct: 651 SEKIYDRLHCLGRHMRSSLSVLFSEYEITNN 681
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 300 bits (768), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 183/611 (29%), Positives = 308/611 (50%), Gaps = 73/611 (11%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
NA+I Y+K ++ AR LFD RD++S+N+M+S Y C L+LF M+
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHE-GLELFFAMRGL-- 291
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
++ D +TLT++++ L G+ +H+Y++ T + +SL MY GS+REA
Sbjct: 292 SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREA 351
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
+FS E D VSW T+I+GY N
Sbjct: 352 EKLFS---------------------------------RMERKDIVSWTTMISGYEYNFL 378
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
++A+ + M + ++ ++ T+A+VLSAC L L G +H L +K S V++
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
+++ Y KC + KA +F ++ +N + W
Sbjct: 439 LINMYSKCKCI-------------------------------DKALDIFHNIPRKNVISW 467
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
T++ +G + +C R+ + T L P+ + + L ACA L GK+ HA++L
Sbjct: 468 TSIIAGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHVL 525
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
RT + +D+ L +AL+DMY +CG + A F +DV +N+++ GY+ G +
Sbjct: 526 RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN---SQKKDVTSWNILLTGYSERGQGSMV 582
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 542
++LF M+K ++PD ITF++LL C +V G +F M EDY V P + HYAC+VD
Sbjct: 583 VELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVD 641
Query: 543 MYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 602
+ GR +L++A +F++K+P+ D +WGA LNAC+I++ L + + + + +++ +
Sbjct: 642 LLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGY 701
Query: 603 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 662
Y+ L N+YA GKW E+ ++R+ M+ T GCSW+ V+ +H F S D H + I
Sbjct: 702 YILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEI 761
Query: 663 YSTLVCLYGKL 673
+ L Y K+
Sbjct: 762 NTVLEGFYEKM 772
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 187/384 (48%), Gaps = 40/384 (10%)
Query: 199 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE-KG 257
NA +A R G + A VF K E N SWN L+ GY + GY + A+ L+ M+ G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERN-LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 258 IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 317
++ + +T VL C G+ L GK VH V++ + V + ++ Y KCG+++
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK--- 248
Query: 318 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 377
A+ LFD + R+ + W A+ SGY ++ C
Sbjct: 249 ----------------------------SARLLFDRMPRRDIISWNAMISGYFENGMCHE 280
Query: 378 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 437
+LF R ++ PD M + +V+ AC + LG+ HAY++ T +D + ++L
Sbjct: 281 GLELFFAMRGL-SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 438 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 497
MY G+ AEK F + +D++ + MI+GY ++ +KAI ++ M + S+KPD
Sbjct: 340 QMYLNAGSWREAEKLFSRM--ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPD 397
Query: 498 AITFVALLSACRHRGLVELG-EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 556
IT A+LSAC G ++ G E +++K ++ + +++MY + ++KA++
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKA--RLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 557 MRKIPIQIDATIWGAFLNACKINN 580
IP + + W + + ++NN
Sbjct: 456 FHNIP-RKNVISWTSIIAGLRLNN 478
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 185/437 (42%), Gaps = 74/437 (16%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
NA + +++ NL A +F S R+L S+N ++ YA D A+ L+ RM
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDE-AMCLYHRMLWV-G 190
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ D T +L + + GK++H ++V+ +L +++LI MY KCG + A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
+F + P D +SWN +I+GY +NG
Sbjct: 251 RLLFD--------------------------------RMPR-RDIISWNAMISGYFENGM 277
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
L LF M ++ + TL SV+SAC L +LG+ +HA V+ + V +
Sbjct: 278 CHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNS 337
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
+ Y G+ R AE +LF + ++ V W
Sbjct: 338 LTQMYLNAGSWREAE-------------------------------KLFSRMERKDIVSW 366
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
T + SGY + + +R +++ PD + + VL ACA L G + H +
Sbjct: 367 TTMISGYEYNFLPDKAIDTYR-MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
+ +L +A+ L++MYSKC I A F + ++VI + +IAG N+
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNI--PRKNVISWTSIIAGLR---LNNRC 480
Query: 483 IQ--LFQEMLKISLKPD 497
+ +F +K++L+P+
Sbjct: 481 FEALIFLRQMKMTLQPN 497
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 37/287 (12%)
Query: 234 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 293
+ G NG +E A+ L M E + ++ +++ C + + G V+++ L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL---- 121
Query: 294 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 353
S + +G++ ++ +A + GN+ A +F
Sbjct: 122 ------------------------SSMSSLGVE---LGNAFLAMFVRFGNLVDAWYVFGK 154
Query: 354 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 413
+SERN W L GY K + L+ + PD VL C L+
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 414 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD--SDRDVILYNVMIA 471
GK+ H +++R +D + +AL+ MY KCG++ KS +L+ D RD+I +N MI+
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDV----KSARLLFDRMPRRDIISWNAMIS 270
Query: 472 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 518
GY +G ++ ++LF M +S+ PD +T +++SAC G LG
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 318/659 (48%), Gaps = 102/659 (15%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +KSG + + L+ +Y+ L + + ++FD+MP
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPE------------------- 170
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
RD+ S+N+++S + + + AL+LF RM+S+ + ++LT +
Sbjct: 171 ------------RDVASWNTVISCFYQSGEAEK-ALELFGRMESS--GFEPNSVSLTVAI 215
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ ++L + GK++H VK +L ++ S+L+DMY KC
Sbjct: 216 SACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDC----------------- 258
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+++A VF K P V+WN++I GYV G + + + MI
Sbjct: 259 ---------------LEVAREVFQKMPR-KSLVAWNSMIKGYVAKGDSKSCVEILNRMII 302
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+G +Q TL S+L AC+ + L GK +H V+++ ++ +V+ ++D Y KCG
Sbjct: 303 EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL 362
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
AE+V++ + + +I+ Y S GN KA ++D +
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM--------------------- 401
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
+ + PD + +VL AC+ A L GKQ H I ++L DE L SA
Sbjct: 402 -----------VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSA 450
Query: 436 LVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
L+DMYSKCGN A + F + +DV+ + VMI+ Y HG +A+ F EM K LK
Sbjct: 451 LLDMYSKCGNEKEAFRIFNSIPK--KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK 508
Query: 496 PDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVE 555
PD +T +A+LSAC H GL++ G KFF M+ Y + P I HY+CM+D+ GR +L +A E
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYE 568
Query: 556 FMRKIPIQID-ATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEG 614
+++ P D A + +AC ++ +L + L++ D+ S Y+ L N+YA+
Sbjct: 569 IIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGE 628
Query: 615 KWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL 673
W+ R+R +M+ K PGCSWI + + + F + D SH +A+ +Y L L G +
Sbjct: 629 SWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHM 687
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/522 (26%), Positives = 236/522 (45%), Gaps = 74/522 (14%)
Query: 56 HRNAFSWNAIIMAYIKAHNLTQARALFDSASHR-DLVSYNSMLSAYAGADGCDTVALDLF 114
R+ ++I Y + AR +F++ R D+ +NS++S Y+ + L++F
Sbjct: 36 RRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYS-KNSMFHDTLEVF 94
Query: 115 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 174
R+ + + D T ++ L G+ +H+ +VK+ SSL+ MY+
Sbjct: 95 KRLLNCSICVP-DSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYA 153
Query: 175 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 234
K +N+F +L VF + PE D SWNT+I
Sbjct: 154 K-------FNLFEN-------------------------SLQVFDEMPE-RDVASWNTVI 180
Query: 235 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC 294
+ + Q+G E+AL LF M G E N +L +SAC+ L L+ GK +H +K
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 295 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 354
+++V+S +VD Y KC + A V+ + KS A +S+I GY +KG+
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD----------- 289
Query: 355 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 414
S+ C + E P + ++L AC+ L G
Sbjct: 290 -----------------SKSCVEILNRM----IIEGTRPSQTTLTSILMACSRSRNLLHG 328
Query: 415 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI-LYNVMIAGY 473
K H Y++R+ +N D + +L+D+Y KCG AE F + + +DV +NVMI+ Y
Sbjct: 329 KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF---SKTQKDVAESWNVMISSY 385
Query: 474 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 533
G KA++++ +M+ + +KPD +TF ++L AC +E G++ +S+ E E
Sbjct: 386 ISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDE 445
Query: 534 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
+ A ++DMY + ++A IP + D W ++A
Sbjct: 446 LLLSA-LLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISA 485
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 295/556 (53%), Gaps = 43/556 (7%)
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
T++++ + + + +H+ +++T +D F + LI + S S AY+VFS
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFS----- 85
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
+ NP + + +I G+V +G ++L+
Sbjct: 86 -------------------------YVSNP---NVYLYTAMIDGFVSSGRSADGVSLYHR 117
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
MI + + + + SVL AC LK+ + +HA VLK S++ V +++ Y K G
Sbjct: 118 MIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGE 173
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
+ A+ ++ + + A + +I YS G + +A LF + ++ V WTA+ G V++
Sbjct: 174 LVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRN 233
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
++ +LFRE + E + + V VL AC+ L LG+ H+++ ++ + +
Sbjct: 234 KEMNKALELFREMQM-ENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFV 292
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
+AL++MYS+CG+I A + F+++ D+DVI YN MI+G A HG +AI F++M+
Sbjct: 293 GNALINMYSRCGDINEARRVFRVM--RDKDVISYNTMISGLAMHGASVEAINEFRDMVNR 350
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
+P+ +T VALL+AC H GL+++G + F SMK +NV P+I HY C+VD+ GR +LE+
Sbjct: 351 GFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEE 410
Query: 553 AVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 612
A F+ IPI+ D + G L+ACKI+ N L ++ + L + E + YV L+N+YA+
Sbjct: 411 AYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYAS 470
Query: 613 EGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGK 672
GKW E IR+ MR K PGCS I V+N IH F GD +H +AIY L L
Sbjct: 471 SGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL--N 528
Query: 673 LYLTFTELKQLDEIQG 688
L F E Q+D I G
Sbjct: 529 RILRFKE-NQIDIIMG 543
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 151/344 (43%), Gaps = 42/344 (12%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H Q +K G SS +++ +Y G L A K+FD+MP R+ + +I Y + +
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+A LF +D V + +M+ + AL+LF MQ + + +E T +L
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNK-ALELFREMQM--ENVSANEFTAVCVL 262
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + L + G+ +HS++ +LS F ++LI+MYS+CG EA VF
Sbjct: 263 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFR-------- 314
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
RD D +S+NT+I+G +G A+ F +M+
Sbjct: 315 ---------VMRD----------------KDVISYNTMISGLAMHGASVEAINEFRDMVN 349
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYCKCGNMR 314
+G NQ TL ++L+AC+ L +G V + + Q G IVD + G +
Sbjct: 350 RGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLE 409
Query: 315 YAESVYAGIGIKSP-FATSSLIAGYSSKGNMTK----AKRLFDS 353
A I I+ +L++ GNM AKRLF+S
Sbjct: 410 EAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFES 453
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 191/643 (29%), Positives = 318/643 (49%), Gaps = 58/643 (9%)
Query: 33 QLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVS 92
++ HL I G + EA KLFD ++ SWN+++ Y AR LFD R+++S
Sbjct: 23 RITHLSRI-GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIIS 81
Query: 93 YNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHS 152
+N ++S Y D A +F M R+ + + + N + + K
Sbjct: 82 WNGLVSGYMKNGEIDE-ARKVFDLMPE-RNVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 153 YMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMD 212
V L F ID K Y + D + ++ +M+ C++G++D
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKL------YEMIPDKDNI----ARTSMIHGLCKEGRVD 189
Query: 213 MALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 272
A +F + E ++W T++ GY QN ++ A +F M EK T S S
Sbjct: 190 EAREIFDEMSE-RSVITWTTMVTGYGQNNRVDDARKIFDVMPEK-------TEVSWTSML 241
Query: 273 TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATS 332
G Y + G + AE ++ + +K A +
Sbjct: 242 MG--------------------------------YVQNGRIEDAEELFEVMPVKPVIACN 269
Query: 333 SLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALI 392
++I+G KG + KA+R+FDS+ ERN W + + ++ LF + +
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI-LMQKQGVR 328
Query: 393 PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKS 452
P ++++L CA A+L GKQ HA ++R + ++D +AS L+ MY KCG + ++
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 453 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM-LKISLKPDAITFVALLSACRHR 511
F +D+I++N +I+GYA HG +A+++F EM L S KP+ +TFVA LSAC +
Sbjct: 389 FDRF--PSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYA 446
Query: 512 GLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGA 571
G+VE G K + SM+ + V P HYACMVDM GR + +A+E + + ++ DA +WG+
Sbjct: 447 GMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGS 506
Query: 572 FLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEA 631
L AC+ ++ + + ++L+++E +N Y+ L+N+YA++G+W ++ +RK M+ +
Sbjct: 507 LLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLV 566
Query: 632 TKLPGCSWIYVENGIHVFTSGD-TSHSKADAIYSTLVCLYGKL 673
K PGCSW VEN +H FT G SH + ++I L L G L
Sbjct: 567 RKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLL 609
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/546 (23%), Positives = 224/546 (41%), Gaps = 121/546 (22%)
Query: 25 ASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDS 84
+ SI + N ++ Y + + ++A KLFD+MP RN SWN ++ Y+K + +AR +FD
Sbjct: 45 SKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDL 104
Query: 85 ASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT------IGM------------ 126
R++VS+ +++ Y D VA LF +M IG
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVD-VAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL 163
Query: 127 -------DEITLTTMLN-----------------------LSAKLRVVCYGKQMHSYMVK 156
D I T+M++ ++ V YG+ +
Sbjct: 164 YEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDAR 223
Query: 157 TANDL----SKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMD 212
D+ ++ + +S++ Y + G +A +F V +++ NAM++ + G++
Sbjct: 224 KIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFE-VMPVKPVIACNAMISGLGQKGEIA 282
Query: 213 MALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 272
A VF E ND SW T+I + +NG+ AL LFI M ++G+ TL S+LS C
Sbjct: 283 KARRVFDSMKERNDA-SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Query: 273 TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATS 332
L L GK VHA +++ + +V+S ++ Y KCG + ++ ++ K +
Sbjct: 342 ASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWN 401
Query: 333 SLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALI 392
S+I+GY+S G E K+F E + +
Sbjct: 402 SIISGYASHG-------------------------------LGEEALKVFCEMPLSGSTK 430
Query: 393 PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKS 452
P+ + V L AC ++A ++ L + E + S
Sbjct: 431 PNEVTFVATLSAC-----------SYAGMVEEGLKIYESMESVF---------------G 464
Query: 453 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 512
+ +T Y M+ G N+A+++ M +++PDA + +LL ACR
Sbjct: 465 VKPITAH------YACMVDMLGRAGRFNEAMEMIDSM---TVEPDAAVWGSLLGACRTHS 515
Query: 513 LVELGE 518
+++ E
Sbjct: 516 QLDVAE 521
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 189/629 (30%), Positives = 300/629 (47%), Gaps = 86/629 (13%)
Query: 65 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 124
I+ Y K + AR +FD +D + +N+M+S Y + +Q RD I
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM-------YVESIQVFRDLI 212
Query: 125 G-----MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 179
+D TL +L A+L+ + G Q+HS KT + L+ I +YSKCG
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 180 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 239
KM AL ++ P D V++N +I GY
Sbjct: 273 ------------------------------KMGSALFREFRKP---DIVAYNAMIHGYTS 299
Query: 240 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 299
NG E +L+LF E++ G TL S++ L + +H LK++ S+ V
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASV 356
Query: 300 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 359
S+ + Y K + A++LFD E++
Sbjct: 357 STALTTVYSKLNEIE-------------------------------SARKLFDESPEKSL 385
Query: 360 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 419
W A+ SGY ++ E LFRE + +E P+ + I +L ACA LSLGK H
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSE-FSPNPVTITCILSACAQLGALSLGKWVHD 444
Query: 420 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 479
+ T +++AL+ MY+KCG+IA A + F L+T ++ + +N MI+GY HG
Sbjct: 445 LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK--KNEVTWNTMISGYGLHGQG 502
Query: 480 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 539
+A+ +F EML + P +TF+ +L AC H GLV+ G++ F SM Y P + HYAC
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYAC 562
Query: 540 MVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADN 599
MVD+ GR L++A++F+ + I+ +++W L AC+I+ +T L + E+L +++ DN
Sbjct: 563 MVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDN 622
Query: 600 GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKA 659
+V L+N+++A+ + + +R+ + ++ K PG + I + HVFTSGD SH +
Sbjct: 623 VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQV 682
Query: 660 DAIYSTLVCLYGKL----YLTFTELKQLD 684
IY L L GK+ Y TEL D
Sbjct: 683 KEIYEKLEKLEGKMREAGYQPETELALHD 711
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 151/359 (42%), Gaps = 41/359 (11%)
Query: 226 DTVSWNTLIAGYVQNGYMERALTLFIEMIEK-GIEYNQHTLASVLSACTGLKCLKLGKCV 284
D +N L+ G+ N +L++F + + ++ N T A +SA +G + + G+ +
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 285 HALVLKNDGCSNQFV-SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 343
H + DGC ++ + S IV Y K +
Sbjct: 142 HGQAVV-DGCDSELLLGSNIVKMYFKFWRVE----------------------------- 171
Query: 344 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 403
A+++FD + E++ ++W + SGY K++ ++FR+ DT ++++L
Sbjct: 172 --DARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 404 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 463
A A L LG Q H+ +T + + + + +YSKCG I F+ D+
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKP--DI 287
Query: 464 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 523
+ YN MI GY +G ++ LF+E++ + + T V+L+ H L+ + +
Sbjct: 288 VAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLK 347
Query: 524 MKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNT 582
N L + +Y + N++E A + + P + W A ++ N T
Sbjct: 348 S----NFLSHASVSTALTTVYSKLNEIESARKLFDESP-EKSLPSWNAMISGYTQNGLT 401
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 114/272 (41%), Gaps = 67/272 (24%)
Query: 10 LVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAY 69
+++Y H +KS S L +YS ++ A KLFD+ P ++ SWNA+I Y
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 70 IKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 129
+ +G A+ LF MQ + + +
Sbjct: 396 TQ--------------------------------NGLTEDAISLFREMQ--KSEFSPNPV 421
Query: 130 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 189
T+T +L+ A+L + GK +H + T + S + ++LI MY+KCGS EA +F
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF--- 478
Query: 190 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 249
DL++K + V+WNT+I+GY +G + AL +
Sbjct: 479 ----DLMTK--------------------------KNEVTWNTMISGYGLHGQGQEALNI 508
Query: 250 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLG 281
F EM+ GI T VL AC+ +K G
Sbjct: 509 FYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 298 bits (763), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 192/647 (29%), Positives = 303/647 (46%), Gaps = 100/647 (15%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H + + GL S F +LIH S G + A ++FD +P F WNAII Y + ++
Sbjct: 41 HARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHF 100
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
AL +++ MQ AR + D T +L
Sbjct: 101 QD--------------------------------ALLMYSNMQLAR--VSPDSFTFPHLL 126
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ L + G+ +H+ + + D F + LI +Y+KC A VF G
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEG------- 179
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+ L PE VSW +++ Y QNG AL +F +M +
Sbjct: 180 -----------------LPL------PE-RTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
++ + L SVL+A T L+ LK G+ +HA V+K
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK------------------------- 250
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
G+ I+ P SL Y+ G + AK LFD + N ++W A+ SGY K+
Sbjct: 251 -----MGLEIE-PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
+F E + + PDT+ I + + ACA +L + + Y+ R+ D ++SA
Sbjct: 305 REAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363
Query: 436 LVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
L+DM++KCG++ A F DRDV++++ MI GY HG +AI L++ M + +
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTL--DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 496 PDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVE 555
P+ +TF+ LL AC H G+V G FF M D+ + P+ HYAC++D+ GR L++A E
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 556 FMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGK 615
++ +P+Q T+WGA L+ACK + + L + A ++L ++ N YVQL+N+YAA
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Query: 616 WNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 662
W+ + +R M+ K K GCSW+ V + F GD SH + + I
Sbjct: 541 WDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 298 bits (763), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/600 (30%), Positives = 305/600 (50%), Gaps = 70/600 (11%)
Query: 64 AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT 123
A++ Y K ++ A F ++V +N ML AY D + +F +MQ +
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN-SFRIFRQMQI--EE 485
Query: 124 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 183
I ++ T ++L +L + G+Q+HS ++KT L+ + S LIDMY+K G A+
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 545
Query: 184 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 243
++ G D VSW T+IAGY Q +
Sbjct: 546 DILIRFAG---------------------------------KDVVSWTTMIAGYTQYNFD 572
Query: 244 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 303
++ALT F +M+++GI ++ L + +SAC GL+ LK G+ +HA
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA----------------- 615
Query: 304 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 363
++ +G PF ++L+ YS G + ++ F+ + + W
Sbjct: 616 -------------QACVSGFSSDLPF-QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN 661
Query: 364 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 423
AL SG+ +S E ++F E + + + + A + A + GKQ HA I +
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRM-NREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 424 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 483
T + + ++ +AL+ MY+KCG+I+ AEK F V S ++ + +N +I Y+ HGF ++A+
Sbjct: 721 TGYDSETEVCNALISMYAKCGSISDAEKQFLEV--STKNEVSWNAIINAYSKHGFGSEAL 778
Query: 484 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 543
F +M+ +++P+ +T V +LSAC H GLV+ G +F SM +Y + P+ HY C+VDM
Sbjct: 779 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDM 838
Query: 544 YGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRY 603
R L +A EF++++PI+ DA +W L+AC ++ N + + A LL++E ++ + Y
Sbjct: 839 LTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATY 898
Query: 604 VQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIY 663
V L+N+YA KW+ R++M+ K K PG SWI V+N IH F GD +H AD I+
Sbjct: 899 VLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 958
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 207/498 (41%), Gaps = 101/498 (20%)
Query: 11 VVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYI 70
VV + H + + GL S CN LI LYS +G + A ++FD + ++ SW A+I
Sbjct: 205 VVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 264
Query: 71 KAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEIT 130
K +A LF CD L +
Sbjct: 265 KNECEAEAIRLF-----------------------CDMYVLGIMPT-----------PYA 290
Query: 131 LTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCD 190
+++L+ K+ + G+Q+H ++K + ++L+ +Y G+ A ++FS
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS--- 347
Query: 191 GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 250
N D V++NTLI G Q GY E+A+ LF
Sbjct: 348 ------------------------------NMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 251 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 310
M G+E + +TLAS++ AC+ L G+ +HA K SN + +++ Y KC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 311 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 370
++ A + ++ N V+W + Y
Sbjct: 438 ADIETALDYFLETEVE-------------------------------NVVLWNVMLVAYG 466
Query: 371 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 430
F++FR+ + E ++P+ ++L C L LG+Q H+ I++T ++
Sbjct: 467 LLDDLRNSFRIFRQMQ-IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 431 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
+ S L+DMY+K G + A L+ + +DV+ + MIAGY + F++KA+ F++ML
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDI--LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 491 KISLKPDAITFVALLSAC 508
++ D + +SAC
Sbjct: 584 DRGIRSDEVGLTNAVSAC 601
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 42/370 (11%)
Query: 209 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 268
G + A VF + PE +WN +I + LF+ M+ + + N+ T + V
Sbjct: 134 GDLYGAFKVFDEMPE-RTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192
Query: 269 LSACTGLK-CLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
L AC G + + +HA +L Y G+ S
Sbjct: 193 LEACRGGSVAFDVVEQIHARIL------------------------------YQGLR-DS 221
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA-VFKLFREFR 386
+ LI YS G + A+R+FD L +++ W A+ SG K++ CEA +LF +
Sbjct: 222 TVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE-CEAEAIRLFCDMY 280
Query: 387 TTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI 446
++P +VL AC +L +G+Q H +L+ + D + +ALV +Y GN+
Sbjct: 281 VL-GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 447 AYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLS 506
AE F + S RD + YN +I G + G+ KA++LF+ M L+PD+ T +L+
Sbjct: 340 ISAEHIFSNM--SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 507 ACRHRGLVELGEKFFM-SMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQID 565
AC G + G++ + K + +I ++++Y + +E A+++ + ++ +
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKI--EGALLNLYAKCADIETALDYFLETEVE-N 454
Query: 566 ATIWGAFLNA 575
+W L A
Sbjct: 455 VVLWNVMLVA 464
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 191/464 (41%), Gaps = 109/464 (23%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
NA+ + +I Y K L A + + +D+VS+ +M++ Y + D AL F +M
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN-FDDKALTTFRQM 582
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
I DE+ LT ++ A L+ + G+Q+H+ +
Sbjct: 583 LDR--GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG------------------- 621
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
FS DL +NA+V R GK++ + F + E D ++WN L++G+
Sbjct: 622 --------FSS-----DLPFQNALVTLYSRCGKIEESYLAF-EQTEAGDNIAWNALVSGF 667
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 297
Q+G E AL +F+ M +GI+ N T S + A + +K GK VHA++ K S
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 298 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 357
V + ++ Y KCG++ AE + + K+ + +++I YS G ++A FD +
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787
Query: 358 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 417
N + P+ + +V VL AC +
Sbjct: 788 N--------------------------------VRPNHVTLVGVLSAC-----------S 804
Query: 418 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAE---KSFQLVTDSDRDVILYNVMIAGYA 474
H LVD IAY E + L + V + +++
Sbjct: 805 HI---------------GLVDK-----GIAYFESMNSEYGLSPKPEHYVCVVDMLTRA-- 842
Query: 475 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 518
G ++A + QEM +KPDA+ + LLSAC +E+GE
Sbjct: 843 --GLLSRAKEFIQEM---PIKPDALVWRTLLSACVVHKNMEIGE 881
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 114/273 (41%), Gaps = 37/273 (13%)
Query: 251 IEMIE-KGIEYNQHTLASVLSACTGLK-CLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 308
I+ +E +GI N TL +L C L G+ +H+ +LK SN +S + DFY
Sbjct: 72 IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 368
KG++ A ++FD + ER W +
Sbjct: 132 -------------------------------FKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGAC-AIQATLSLGKQTHAYILRTKLN 427
VF LF +E + P+ VL AC + +Q HA IL L
Sbjct: 161 LASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR 219
Query: 428 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
+ + L+D+YS+ G + A + F + D + MI+G + + E +AI+LF
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS--WVAMISGLSKNECEAEAIRLFC 277
Query: 488 EMLKISLKPDAITFVALLSACRHRGLVELGEKF 520
+M + + P F ++LSAC+ +E+GE+
Sbjct: 278 DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 298 bits (763), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/611 (30%), Positives = 320/611 (52%), Gaps = 15/611 (2%)
Query: 66 IMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIG 125
I + K+ + AR +FD D V++N+ML++Y+ G A+ LF +++ +
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRL-GLHQEAIALFTQLRFSDAKP- 68
Query: 126 MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNV 185
D+ + T +L+ A L V +G+++ S ++++ S +SLIDMY KC A V
Sbjct: 69 -DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 186 FSG--CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 243
F CD + V+ +++ A + + AL+VF + P+ +WN +I+G+ G +
Sbjct: 128 FRDMCCDSRNE-VTWCSLLFAYMNAEQFEAALDVFVEMPK-RVAFAWNIMISGHAHCGKL 185
Query: 244 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKC-LKLGKCVHALVLKNDGCSNQFVSSG 302
E L+LF EM+E + + +T +S+++AC+ + G+ VHA++LKN S +
Sbjct: 186 ESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNS 245
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
++ FY K G+ A I + + + +S+I G KA +F E+N V W
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTW 305
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
T + +GY ++ E + F E + + D VL AC+ A L GK H ++
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKS-GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLI 364
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
+ +ALV++Y+KCG+I A+++F + +++D++ +N M+ + HG ++A
Sbjct: 365 HCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI--ANKDLVSWNTMLFAFGVHGLADQA 422
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 542
++L+ M+ +KPD +TF+ LL+ C H GLVE G F SM +DY + E+ H CM+D
Sbjct: 423 LKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMID 482
Query: 543 MYGRGNQLEKAVE----FMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEAD 598
M+GRG L +A + + + + + W L AC + +T L ++ + L E
Sbjct: 483 MFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPS 542
Query: 599 NGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSK 658
+V L+N+Y + G+W E +R+EM + K PGCSWI V N + F GD+SH +
Sbjct: 543 EEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPR 602
Query: 659 ADAIYSTLVCL 669
+ + TL CL
Sbjct: 603 LEELSETLNCL 613
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 234/493 (47%), Gaps = 47/493 (9%)
Query: 20 IKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKM--PHRNAFSWNAIIMAYIKAHNLTQ 77
I+SG +S+ N LI +Y A+K+F M RN +W +++ AY+ A
Sbjct: 97 IRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEA 156
Query: 78 ARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLN- 136
A +F R ++N M+S +A ++ L LF M + D T ++++N
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLES-CLSLFKEMLESE--FKPDCYTFSSLMNA 213
Query: 137 LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLV 196
SA V YG+ +H+ M+K + A +S++ Y+K GS +A + V+ V
Sbjct: 214 CSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIE-VLTQV 272
Query: 197 SKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEK 256
S N+++ AC + G+ + AL VF PE N V+W T+I GY +NG E+AL F+EM++
Sbjct: 273 SWNSIIDACMKIGETEKALEVFHLAPEKN-IVTWTTMITGYGRNGDGEQALRFFVEMMKS 331
Query: 257 GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 316
G++ + +VL AC+GL L GK +H ++ +V + +V+ Y KCG+++ A
Sbjct: 332 GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Query: 317 ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE 376
+ + I K + ++++ + G +A +L+D++ + SG
Sbjct: 392 DRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNM----------IASG-------- 433
Query: 377 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT-KLNMDEKLASA 435
+ PD + + +L C+ + G +++ ++ ++ +
Sbjct: 434 --------------IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTC 479
Query: 436 LVDMYSKCGNIAYAEK----SFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 491
++DM+ + G++A A+ LVTDS + ++ A H + + + ++LK
Sbjct: 480 MIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTH--WHTELGREVSKVLK 537
Query: 492 ISLKPDAITFVAL 504
I+ + ++FV L
Sbjct: 538 IAEPSEEMSFVLL 550
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 332 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 391
+S IA + G + A+++FD + E + V W + + Y + + LF + R ++A
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 392 IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 451
PD +L CA + G++ + ++R+ + ++L+DMY KC + A K
Sbjct: 68 -PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 452 SFQ-LVTDSDRDV------------------------------ILYNVMIAGYAHHGFEN 480
F+ + DS +V +N+MI+G+AH G
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSAC 508
+ LF+EML+ KPD TF +L++AC
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNAC 214
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 38/265 (14%)
Query: 11 VVYRDHVQAI--KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMA 68
VVY V A+ K+G +S++ N ++ Y+ G +A + + + SWN+II A
Sbjct: 221 VVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDA 280
Query: 69 YIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDE 128
+K +A +F A +++V++ +M++ Y G +G AL F M + + D
Sbjct: 281 CMKIGETEKALEVFHLAPEKNIVTWTTMITGY-GRNGDGEQALRFFVEMM--KSGVDSDH 337
Query: 129 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG 188
+L+ + L ++ +GK +H ++ + ++L+++Y+KCG +EA F
Sbjct: 338 FAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFG- 396
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 248
D+ +K D VSWNT++ + +G ++AL
Sbjct: 397 -----DIANK---------------------------DLVSWNTMLFAFGVHGLADQALK 424
Query: 249 LFIEMIEKGIEYNQHTLASVLSACT 273
L+ MI GI+ + T +L+ C+
Sbjct: 425 LYDNMIASGIKPDNVTFIGLLTTCS 449
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 220/715 (30%), Positives = 358/715 (50%), Gaps = 65/715 (9%)
Query: 2 KSLIVR---DALVVYRDHV--QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPH 56
++LI+R + +V+ H+ + + G + + L+ Y+ G L EA LF+ MP
Sbjct: 46 EALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPE 105
Query: 57 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 116
RN + NA++ Y+K + +A LF +++VS+ ML+A DG A++LF
Sbjct: 106 RNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCD-DGRSEDAVELFDE 163
Query: 117 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 176
M R+ + + TL T L + + KQ+ M + D+ + +++I Y +
Sbjct: 164 MPE-RNVVSWN--TLVTGLIRNGDME---KAKQVFDAM--PSRDVVSW--NAMIKGYIEN 213
Query: 177 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 236
EA +F G ++V+ +MV CR G + A +F + PE N VSW +I+G
Sbjct: 214 DGMEEAKLLF-GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERN-IVSWTAMISG 271
Query: 237 YVQNGYMERALTLFIEMIEK--GIEYNQHTLASVLSACTGL--KCLKLGKCVHALVLKN- 291
+ N AL LF+EM + + N TL S+ AC GL + +LG+ +HA V+ N
Sbjct: 272 FAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNG 331
Query: 292 ------DG-----CSNQFVSSG--------------------IVDFYCKCGNMRYAESVY 320
DG + + SSG I++ Y K G++ AE+++
Sbjct: 332 WETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLF 391
Query: 321 AGI-GIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVF 379
+ + + +S+I GY G++++A LF L +++ V WT + SG V+++
Sbjct: 392 ERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAA 451
Query: 380 KLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL--ASALV 437
L + L P +L + + L GK H I +T D L ++LV
Sbjct: 452 SLLSDMVRC-GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLV 510
Query: 438 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 497
MY+KCG I A + F + +D + +N MI G +HHG +KA+ LF+EML KP+
Sbjct: 511 SMYAKCGAIEDAYEIFAKMVQ--KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPN 568
Query: 498 AITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFM 557
++TF+ +LSAC H GL+ G + F +MKE Y++ P I HY M+D+ GR +L++A EF+
Sbjct: 569 SVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFI 628
Query: 558 RKIPIQIDATIWGAFLNACKIN----NNTTLVKQAEEELLKVEADNGSRYVQLANVYAAE 613
+P D T++GA L C +N + + ++A LL+++ N +V L NVYA
Sbjct: 629 SALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGL 688
Query: 614 GKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVC 668
G+ + +RKEM K K PGCSW+ V +VF SGD S S+A + + C
Sbjct: 689 GRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQMVLPIFC 743
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 275/524 (52%), Gaps = 45/524 (8%)
Query: 146 YGKQMHSYMVKTANDLSKFALSSLIDMYSKC---GSFREAYNVFSGCDGVVDLVS----K 198
+G+ +H ++V+ D + ++L++MY+K GS NVF D + S +
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVF---DEMPQRTSNSGDE 179
Query: 199 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 258
+ C +D VF P D VS+NT+IAGY Q+G E AL + EM +
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPR-KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL 238
Query: 259 EYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAES 318
+ + TL+SVL + + GK +H V++ S+ ++ S +VD Y K + +E
Sbjct: 239 KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE- 297
Query: 319 VYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAV 378
R+F L R+ + W +L +GYV++ +
Sbjct: 298 ------------------------------RVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327
Query: 379 FKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVD 438
+LFR+ T + P + +V+ ACA ATL LGKQ H Y+LR + +ASALVD
Sbjct: 328 LRLFRQM-VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVD 386
Query: 439 MYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDA 498
MYSKCGNI A K F + D + + +I G+A HG ++A+ LF+EM + +KP+
Sbjct: 387 MYSKCGNIKAARKIFDRMNVLDE--VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQ 444
Query: 499 ITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMR 558
+ FVA+L+AC H GLV+ +F SM + Y + E+ HYA + D+ GR +LE+A F+
Sbjct: 445 VAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFIS 504
Query: 559 KIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNE 618
K+ ++ ++W L++C ++ N L ++ E++ V+++N YV + N+YA+ G+W E
Sbjct: 505 KMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKE 564
Query: 619 MGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 662
M ++R MR K K P CSWI ++N H F SGD SH D I
Sbjct: 565 MAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKI 608
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 263/456 (57%), Gaps = 15/456 (3%)
Query: 240 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 299
NG ++A L+++++ I N+ T +S+L +C+ K GK +H VLK + +V
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYV 163
Query: 300 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 359
++G+VD Y K G++ A+ V+ + +S +++++I Y+ +GN+ A+ LFDS+ ER+
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI 223
Query: 360 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 419
V W + GY + LF++ PD + +V L AC+ L G+ H
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHV 283
Query: 420 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR-DVILYNVMIAGYAHHGF 478
++ +++ ++ K+ + L+DMYSKCG++ E++ + D+ R D++ +N MIAGYA HG+
Sbjct: 284 FVKSSRIRLNVKVCTGLIDMYSKCGSL---EEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 479 ENKAIQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 537
A++LF EM I+ L+P ITF+ L AC H GLV G + F SM ++Y + P+I HY
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 538 ACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEA 597
C+V + GR QL++A E ++ + + D+ +W + L +CK++ + L K+ E L+ +
Sbjct: 401 GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNI 460
Query: 598 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 657
N YV L+N+YA+ G + + ++R M+ K K PG S I +EN +H F +GD HS
Sbjct: 461 KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHS 520
Query: 658 KADAIYSTL------VCLYGKLYLTFTELKQLDEIQ 687
K+ IY+ L + +G + T T L+ L+E +
Sbjct: 521 KSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETE 556
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 121/258 (46%), Gaps = 36/258 (13%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +K GL + L+ +Y+ G + A K+FD+MP R+ S A+I Y K N+
Sbjct: 149 HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 208
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
ARALFDS RD+VS+N M+ YA G AL LF ++ A DEIT+ L
Sbjct: 209 EAARALFDSMCERDIVSWNVMIDGYA-QHGFPNDALMLFQKLL-AEGKPKPDEITVVAAL 266
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ +++ + G+ +H ++ + L+ + LIDMYSKCGS EA VF+ D+
Sbjct: 267 SACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR-KDI 325
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
V+ NAM IAGY +GY + AL LF EM
Sbjct: 326 VAWNAM--------------------------------IAGYAMHGYSQDALRLFNEMQG 353
Query: 256 -KGIEYNQHTLASVLSAC 272
G++ T L AC
Sbjct: 354 ITGLQPTDITFIGTLQAC 371
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 146/289 (50%), Gaps = 12/289 (4%)
Query: 68 AYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMD 127
AY + + ALF DL + + ++ A +G A L+ ++ S+ I +
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINT-ASINGLKDQAFLLYVQLLSSE--INPN 129
Query: 128 EITLTTML-NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 186
E T +++L + S K GK +H++++K + + + L+D+Y+K G A VF
Sbjct: 130 EFTFSSLLKSCSTK-----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVF 184
Query: 187 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 246
LVS AM+ + G ++ A +F E D VSWN +I GY Q+G+ A
Sbjct: 185 DRMPER-SLVSSTAMITCYAKQGNVEAARALFDSMCE-RDIVSWNVMIDGYAQHGFPNDA 242
Query: 247 LTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 305
L LF +++ +G + ++ T+ + LSAC+ + L+ G+ +H V + N V +G++D
Sbjct: 243 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLID 302
Query: 306 FYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 354
Y KCG++ A V+ K A +++IAGY+ G A RLF+ +
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 187/620 (30%), Positives = 304/620 (49%), Gaps = 69/620 (11%)
Query: 21 KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARA 80
K L + N ++ +Y +G L EA+ F ++ ++ SWN +I Y KA + +A
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 81 LFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAK 140
LF ++VS+N ++S + D AL+ RMQ R+ + +D L L +
Sbjct: 195 LFHRMPQPNVVSWNCLISGFV--DKGSPRALEFLVRMQ--REGLVLDGFALPCGLKACSF 250
Query: 141 LRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNA 200
++ GKQ+H +VK+ + S FA+S+LIDMYS CGS A +VF
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH------------- 297
Query: 201 MVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY 260
+ +A+N + WN++++G++ N E AL L +++ + + +
Sbjct: 298 ---------QEKLAVN--------SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCF 340
Query: 261 NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVY 320
+ +TL+ L C L+LG VH+LV+ + + V S +VD + GN++
Sbjct: 341 DSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQ------ 394
Query: 321 AGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFK 380
A +LF L ++ + ++ L G VKS F
Sbjct: 395 -------------------------DAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFY 429
Query: 381 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMY 440
LFRE L D I+ N+L C+ A+L GKQ H ++ + A+ALVDMY
Sbjct: 430 LFREL-IKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMY 488
Query: 441 SKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 500
KCG I F + + RDV+ + +I G+ +G +A + F +M+ I ++P+ +T
Sbjct: 489 VKCGEIDNGVVLFDGMLE--RDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVT 546
Query: 501 FVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
F+ LLSACRH GL+E +MK +Y + P + HY C+VD+ G+ ++A E + K+
Sbjct: 547 FLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKM 606
Query: 561 PIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMG 620
P++ D TIW + L AC + N LV E+LLK D+ S Y L+N YA G W+++
Sbjct: 607 PLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLS 666
Query: 621 RIRKEMRGKEATKLPGCSWI 640
++R+ + K K G SWI
Sbjct: 667 KVREAAK-KLGAKESGMSWI 685
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 136/540 (25%), Positives = 240/540 (44%), Gaps = 70/540 (12%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
IK G++ ++F N +I +Y LL +AHK+FD+M RN +W ++ Y
Sbjct: 28 QAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYT----- 82
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+DG A++L+ RM + + +E + +L
Sbjct: 83 ---------------------------SDGKPNKAIELYRRMLDSEEE-AANEFMYSAVL 114
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + G ++ + K ++S++DMY K G EA + F
Sbjct: 115 KACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSS- 173
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
S N +++ C+ G MD A+ +F + P+ N VSWN LI+G+V G RAL + M
Sbjct: 174 TSWNTLISGYCKAGLMDEAVTLFHRMPQPN-VVSWNCLISGFVDKGS-PRALEFLVRMQR 231
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+G+ + L L AC+ L +GK +H V+K+ S+ F S ++D Y CG++ Y
Sbjct: 232 EGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIY 291
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
A V+ + A +S +A VW ++ SG++ +++
Sbjct: 292 AADVFH----QEKLAVNSSVA------------------------VWNSMLSGFLINEEN 323
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
EA L + ++ L D+ + L C L LG Q H+ ++ + +D + S
Sbjct: 324 EAALWLLLQIYQSD-LCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSI 382
Query: 436 LVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
LVD+++ GNI A K F + ++D+I ++ +I G GF + A LF+E++K+ L
Sbjct: 383 LVDLHANVGNIQDAHKLFHRL--PNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLD 440
Query: 496 PDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 554
D +L C + G++ + +K+ Y P +VDMY + +++ V
Sbjct: 441 ADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEP--VTATALVDMYVKCGEIDNGV 498
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 179/380 (47%), Gaps = 16/380 (4%)
Query: 226 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY-NQHTLASVLSACTGLKCLKLGKCV 284
+ V+W T+++GY +G +A+ L+ M++ E N+ ++VL AC + ++LG V
Sbjct: 70 NIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILV 129
Query: 285 HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNM 344
+ + K + + + + +VD Y K G + A S + I S + ++LI+GY G M
Sbjct: 130 YERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLM 189
Query: 345 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 404
+A LF + + N V W L SG+V A+ L R R E L+ D + L A
Sbjct: 190 DEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQR--EGLVLDGFALPCGLKA 247
Query: 405 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF-QLVTDSDRDV 463
C+ L++GKQ H ++++ L SAL+DMYS CG++ YA F Q + V
Sbjct: 248 CSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 464 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK---- 519
++N M++G+ + A+ L ++ + L D+ T L C + + LG +
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSL 367
Query: 520 -FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKI 578
+ DY V + +VD++ ++ A + ++P + D + + C
Sbjct: 368 VVVSGYELDYIV------GSILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVK 420
Query: 579 NNNTTLVKQAEEELLKVEAD 598
+ +L EL+K+ D
Sbjct: 421 SGFNSLAFYLFRELIKLGLD 440
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 138/348 (39%), Gaps = 68/348 (19%)
Query: 265 LASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIG 324
+A+ L C ++ K G+ + A V+K N F+++ ++ Y + R
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYV---DFRL--------- 55
Query: 325 IKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE 384
++ A ++FD +SERN V WT + SGY + +L+R
Sbjct: 56 -------------------LSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRR 96
Query: 385 FRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCG 444
+E + + VL AC + + LG + I + L D L +++VDMY K G
Sbjct: 97 MLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNG 156
Query: 445 NIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL---------- 494
+ A SF+ + +N +I+GY G ++A+ LF M + ++
Sbjct: 157 RLIEANSSFKEILRPSSTS--WNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGF 214
Query: 495 ----KPDAITFVAL----------------LSACRHRGLVELGEKFFMS-MKEDYNVLPE 533
P A+ F+ L AC GL+ +G++ +K P
Sbjct: 215 VDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSP- 273
Query: 534 IYHYACMVDMYGRGNQLEKAVEFM--RKIPIQIDATIWGAFLNACKIN 579
+ + ++DMY L A + K+ + +W + L+ IN
Sbjct: 274 -FAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLIN 320
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 206/673 (30%), Positives = 318/673 (47%), Gaps = 88/673 (13%)
Query: 3 SLIVRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSW 62
SL+ DAL + +K+ +++S +++H + K D P F
Sbjct: 2 SLLSADALGLL------LKNAISASSMRLGRVVHARIV--------KTLDSPP--PPFLA 45
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N +I Y K + AR + R++VS+ S++S A +G + AL F M+ R+
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA-QNGHFSTALVEFFEMR--RE 102
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ ++ T A LR+ GKQ+H+ VK L F S DMY
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMY--------- 153
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
C+ D A +F + PE N +WN I+ V +G
Sbjct: 154 -----------------------CKTRLRDDARKLFDEIPERN-LETWNAFISNSVTDGR 189
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
A+ FIE N T + L+AC+ L LG +H LVL++ ++ V +G
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 249
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
++DFY KC +R +E ++ +G K N V W
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTK-------------------------------NAVSW 278
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
+L + YV++ + E L+ R D MI +VL ACA A L LG+ HA+ +
Sbjct: 279 CSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI-SSVLSACAGMAGLELGRSIHAHAV 337
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
+ + + SALVDMY KCG I +E++F + + ++++ N +I GYAH G + A
Sbjct: 338 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE--KNLVTRNSLIGGYAHQGQVDMA 395
Query: 483 IQLFQEMLK--ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 540
+ LF+EM P+ +TFV+LLSAC G VE G K F SM+ Y + P HY+C+
Sbjct: 396 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 455
Query: 541 VDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 600
VDM GR +E+A EF++K+PIQ ++WGA NAC+++ L A E L K++ +
Sbjct: 456 VDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDS 515
Query: 601 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKAD 660
+V L+N +AA G+W E +R+E++G K G SWI V+N +H F + D SH
Sbjct: 516 GNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNK 575
Query: 661 AIYSTLVCLYGKL 673
I +TL L ++
Sbjct: 576 EIQTTLAKLRNEM 588
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 191/618 (30%), Positives = 307/618 (49%), Gaps = 84/618 (13%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
N + N +I Y K A +FDS R++VS+++++S + +G +L LF+ M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHV-LNGDLKGSLSLFSEM 98
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
R I +E T +T L L + G Q+H + +K ++ +SL+DMYSKCG
Sbjct: 99 --GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG 156
Query: 178 SFREAYNVFSGCDGVVD--LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 235
EA VF +VD L+S NAM IA
Sbjct: 157 RINEAEKVFR---RIVDRSLISWNAM--------------------------------IA 181
Query: 236 GYVQNGYMERALTLFIEMIEKGIE--YNQHTLASVLSACTGLKCLKLGKCVHALVLKND- 292
G+V GY +AL F M E I+ ++ TL S+L AC+ + GK +H ++++
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 293 GC-SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 351
C S+ ++ +VD Y KCG + A + I K+ + SSLI GY+ +G +A LF
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 352 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 411
L E N + D+ + +++G A A L
Sbjct: 302 KRLQELNSQI--------------------------------DSFALSSIIGVFADFALL 329
Query: 412 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF---QLVTDSDRDVILYNV 468
GKQ A ++ ++ + +++VDMY KCG + AEK F QL +DVI + V
Sbjct: 330 RQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL-----KDVISWTV 384
Query: 469 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 528
+I GY HG K++++F EML+ +++PD + ++A+LSAC H G+++ GE+ F + E +
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH 444
Query: 529 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQA 588
+ P + HYAC+VD+ GR +L++A + +PI+ + IW L+ C+++ + L K+
Sbjct: 445 GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEV 504
Query: 589 EEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 648
+ LL+++A N + YV ++N+Y G WNE G R+ K K G SW+ +E +H
Sbjct: 505 GKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHF 564
Query: 649 FTSGDTSHSKADAIYSTL 666
F SG+ SH I TL
Sbjct: 565 FRSGEDSHPLTPVIQETL 582
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 223/511 (43%), Gaps = 113/511 (22%)
Query: 130 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 189
L ++L + + + G Q+H Y++K+ + L+ + LIDMY KC RE
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKC---REPL------ 58
Query: 190 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 249
MA VF PE N VSW+ L++G+V NG ++ +L+L
Sbjct: 59 -----------------------MAYKVFDSMPERN-VVSWSALMSGHVLNGDLKGSLSL 94
Query: 250 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 309
F EM +GI N+ T ++ L AC L L+ G +H LK V + +VD Y K
Sbjct: 95 FSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 154
Query: 310 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 369
CG + AE V+ I +S + +++IAG+ G +KA F + E N
Sbjct: 155 CGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN----------- 203
Query: 370 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 429
+K + PD + ++L AC+ + GKQ H +++R+ +
Sbjct: 204 IKER-------------------PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244
Query: 430 EK--LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
+ +LVD+Y KCG + A K+F + ++ +I ++ +I GYA G +A+ LF+
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQI--KEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 488 EMLKISLKPDAITF---------VALLSACRHR--------------------------G 512
+ +++ + D+ ALL + G
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 362
Query: 513 LVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDATIW 569
LV+ EK F M+ L ++ + ++ YG+ +K+V M + I+ D +
Sbjct: 363 LVDEAEKCFAEMQ-----LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 570 GAFLNACKINNNTTLVKQAEEELLKVEADNG 600
A L+AC +++ ++K+ EE K+ +G
Sbjct: 418 LAVLSAC---SHSGMIKEGEELFSKLLETHG 445
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 184/636 (28%), Positives = 303/636 (47%), Gaps = 74/636 (11%)
Query: 33 QLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVS 92
+HL IH LL + + + R+ F + A AR L +
Sbjct: 13 HFLHLKQIHCLLLTSPIFYTR---RDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQL 69
Query: 93 YNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHS 152
++S++ ++G + L A R+ + T +L KLR Q H+
Sbjct: 70 WDSLIGHFSGGITLNR-RLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHA 127
Query: 153 YMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMD 212
++VK D F +SLI YS G F A +F G
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGA----------------------- 164
Query: 213 MALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 272
E D V+W +I G+V+NG A+ F+EM + G+ N+ T+ SVL A
Sbjct: 165 ----------EDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAA 214
Query: 273 TGLKCLKLGKCVHALVLKNDGCS-NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT 331
++ ++ G+ VH L L+ + F+ S +VD Y KC S Y
Sbjct: 215 GKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC-------SCY----------- 256
Query: 332 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 391
A+++FD + RN V WTAL +GYV+S+ + +F E ++ +
Sbjct: 257 -------------DDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD-V 302
Query: 392 IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 451
P+ + +VL ACA L G++ H Y+++ + ++ + L+D+Y KCG + A
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAIL 362
Query: 452 SFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 511
F+ + +++V + MI G+A HG+ A LF ML + P+ +TF+A+LSAC H
Sbjct: 363 VFERL--HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHG 420
Query: 512 GLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGA 571
GLVE G + F+SMK +N+ P+ HYACMVD++GR LE+A + ++P++ +WGA
Sbjct: 421 GLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGA 480
Query: 572 FLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEA 631
+C ++ + L K A ++K++ + RY LAN+Y+ W+E+ R+RK+M+ ++
Sbjct: 481 LFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQV 540
Query: 632 TKLPGCSWIYVENGIHVFTSGDTSHS-KADAIYSTL 666
K PG SWI V+ + F + D ++D +Y TL
Sbjct: 541 VKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTL 576
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 67/245 (27%)
Query: 28 IFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASH 87
+F + L+ +Y +A K+FD+MP RN +W A+I Y+ Q+R FD
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYV------QSRC-FD---- 288
Query: 88 RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYG 147
+ ++ + ML + + +E TL+++L+ A + + G
Sbjct: 289 KGMLVFEEML-----------------------KSDVAPNEKTLSSVLSACAHVGALHRG 325
Query: 148 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCR 207
+++H YM+K + +++ A ++LID+Y KCG EA VF L KN
Sbjct: 326 RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE------RLHEKN-------- 371
Query: 208 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 267
+W +I G+ +GY A LF M+ + N+ T +
Sbjct: 372 -------------------VYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMA 412
Query: 268 VLSAC 272
VLSAC
Sbjct: 413 VLSAC 417
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/550 (28%), Positives = 282/550 (51%), Gaps = 36/550 (6%)
Query: 126 MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNV 185
+D+ + +L +K+ + G ++H K A F + +DMY+ CG A NV
Sbjct: 109 LDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNV 168
Query: 186 FSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMER 245
F D +S D V+WNT+I Y + G ++
Sbjct: 169 F-------DEMSHR--------------------------DVVTWNTMIERYCRFGLVDE 195
Query: 246 ALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 305
A LF EM + + ++ L +++SAC ++ + ++ +++ND + + + +V
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVT 255
Query: 306 FYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTAL 365
Y G M A + + +++ F ++++++GYS G + A+ +FD +++ V WT +
Sbjct: 256 MYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTM 315
Query: 366 CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 425
S YV+S + ++F E + PD + + +V+ ACA L K H+ I
Sbjct: 316 ISAYVESDYPQEALRVFEEM-CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 374
Query: 426 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 485
L + + +AL++MY+KCG + F+ + R+V+ ++ MI + HG + A+ L
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKM--PRRNVVSWSSMINALSMHGEASDALSL 432
Query: 486 FQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 545
F M + +++P+ +TFV +L C H GLVE G+K F SM ++YN+ P++ HY CMVD++G
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492
Query: 546 RGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 605
R N L +A+E + +P+ + IWG+ ++AC+I+ L K A + +L++E D+ V
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVL 552
Query: 606 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYST 665
++N+YA E +W ++ IR+ M K K G S I H F GD H +++ IY+
Sbjct: 553 MSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAK 612
Query: 666 LVCLYGKLYL 675
L + KL L
Sbjct: 613 LDEVVSKLKL 622
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 171/400 (42%), Gaps = 65/400 (16%)
Query: 214 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEK-GIEYNQHTLASVLSAC 272
ALNVF P +++ +N + ++ RA LF + I G +Q + +L A
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSE-PRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 273 TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATS 332
+ + L G +H + K + FV +G +D Y CG + YA +V
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNV------------- 168
Query: 333 SLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALI 392
FD +S R+ V W + Y + + FKLF E + + ++
Sbjct: 169 ------------------FDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSN-VM 209
Query: 393 PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKS 452
PD MI+ N++ AC + + + +++ + MD L +ALV MY+ G + A +
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 453 F---------------------------QLVTD--SDRDVILYNVMIAGYAHHGFENKAI 483
F Q++ D +D++ + MI+ Y + +A+
Sbjct: 270 FRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEAL 329
Query: 484 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 543
++F+EM +KPD ++ +++SAC + G+++ K+ S + E+ +++M
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALINM 388
Query: 544 YGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTT 583
Y + L+ + K+P + + W + +NA ++ +
Sbjct: 389 YAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEAS 427
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/517 (20%), Positives = 207/517 (40%), Gaps = 106/517 (20%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H A K F + +Y+ G + A +FD+M HR+ +WN +I Y + +
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+A LF+ +++ DE+ L ++
Sbjct: 194 DEAFKLFEEMKDSNVMP----------------------------------DEMILCNIV 219
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + + Y + ++ ++++ + L++L+ MY+ G A F V +L
Sbjct: 220 SACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM-SVRNL 278
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
AMV+ + G++D A V + E D V W T+I+ YV++ Y + AL +F EM
Sbjct: 279 FVSTAMVSGYSKCGRLDDA-QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC 337
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
GI+ + ++ SV+SAC L L K VH+ + N S +++ +++ Y KCG +
Sbjct: 338 SGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDA 397
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
V+ + ++ + SS+I S G + A LF + + N
Sbjct: 398 TRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN----------------- 440
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
+ P+ + V VL C+ + GK K+ ++
Sbjct: 441 ---------------VEPNEVTFVGVLYGCSHSGLVEEGK---------------KIFAS 470
Query: 436 LVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
+ D Y+ + + Y M+ + +A+++ + M +
Sbjct: 471 MTDEYNITPKLEH-----------------YGCMVDLFGRANLLREALEVIESM---PVA 510
Query: 496 PDAITFVALLSACRHRGLVELGE---KFFMSMKEDYN 529
+ + + +L+SACR G +ELG+ K + ++ D++
Sbjct: 511 SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 547
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 194/679 (28%), Positives = 337/679 (49%), Gaps = 89/679 (13%)
Query: 47 AHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGC 106
A+KLFD+MP R+ +WN I+M +++ N +A LF R++ ++GA
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELF-----REM--------QFSGAKAY 88
Query: 107 DTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL 166
D+ T+ +L + + G+Q+H Y+++ + +
Sbjct: 89 DS---------------------TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMC 127
Query: 167 SSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEF-- 224
+SLI MYS+ G + VF+ +L S N+++++ + G +D A+ + E
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDR-NLSSWNSILSSYTKLGYVDDAIGLL-DEMEICG 185
Query: 225 --NDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGK 282
D V+WN+L++GY G + A+ + M G++ + +++S+L A LKLGK
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 283 CVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVY---------------AGI---- 323
+H +L+N + +V + ++D Y K G + YA V+ +G+
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 324 ---------------GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWT 363
GIK T +SL +GY++ G KA + + E+ N V WT
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 364 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 423
A+ SG K+ K+F + + E + P+ + +L + L GK+ H + LR
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQE-EGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLR 424
Query: 424 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 483
L D +A+ALVDMY K G++ A + F + ++ + +N M+ GYA G + I
Sbjct: 425 KNLICDAYVATALVDMYGKSGDLQSAIEIFWGI--KNKSLASWNCMLMGYAMFGRGEEGI 482
Query: 484 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 543
F ML+ ++PDAITF ++LS C++ GLV+ G K+F M+ Y ++P I H +CMVD+
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDL 542
Query: 544 YGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRY 603
GR L++A +F++ + ++ DATIWGAFL++CKI+ + L + A + L +E N + Y
Sbjct: 543 LGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANY 602
Query: 604 VQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIY 663
+ + N+Y+ +W ++ RIR MR SWI ++ +H+F + +H IY
Sbjct: 603 MMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIY 662
Query: 664 STLVCLYGKLYLTFTELKQ 682
+LY +E+K+
Sbjct: 663 F-------ELYKLVSEMKK 674
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 154/614 (25%), Positives = 263/614 (42%), Gaps = 141/614 (22%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H ++ GL S++ CN LI +YS +G L+ + K+F+ M RN SWN+I+ +Y K +
Sbjct: 112 HGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYV 171
Query: 76 TQARALFDSAS----HRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEIT- 130
A L D D+V++NS+LS YA + G A+ + RMQ A G+ T
Sbjct: 172 DDAIGLLDEMEICGLKPDIVTWNSLLSGYA-SKGLSKDAIAVLKRMQIA----GLKPSTS 226
Query: 131 -LTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 189
++++L A+ + GK +H Y+++ + ++LIDMY K G A VF
Sbjct: 227 SISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM 286
Query: 190 D---------------------------------GV-VDLVSKNAMVAACCRDGKMDMAL 215
D G+ D ++ N++ + GK + AL
Sbjct: 287 DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346
Query: 216 NVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 272
+V K E + VSW + +G +NG AL +FI+M E+G+ N T++++L
Sbjct: 347 DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Query: 273 TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATS 332
L L GK VH L+ + + +V++ +VD Y K G+++ A ++ GI KS + +
Sbjct: 407 GCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWN 466
Query: 333 SLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALI 392
++ GY+ G + ++ A F + E +
Sbjct: 467 CMLMGYAMFG----------------------------RGEEGIAAFSVMLE----AGME 494
Query: 393 PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA--SALVDMYSKCGNIAYAE 450
PD + +VL C + G + + ++R++ + + S +VD+ + G
Sbjct: 495 PDAITFTSVLSVCKNSGLVQEGWK-YFDLMRSRYGIIPTIEHCSCMVDLLGRSG------ 547
Query: 451 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACR- 509
+ ++A Q M SLKPDA + A LS+C+
Sbjct: 548 ---------------------------YLDEAWDFIQTM---SLKPDATIWGAFLSSCKI 577
Query: 510 HRGLVELGEKFFMSMK--EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP------ 561
HR L EL E + ++ E +N +Y M+++Y N+ E VE +R +
Sbjct: 578 HRDL-ELAEIAWKRLQVLEPHNSA----NYMMMINLYSNLNRWED-VERIRNLMRNNRVR 631
Query: 562 -------IQIDATI 568
IQID T+
Sbjct: 632 VQDLWSWIQIDQTV 645
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 37/236 (15%)
Query: 280 LGKCVHALVLKN--DGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG 337
LG +H ++K D + VS+ + FY +C ++ +A ++ + + A + ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASM-GFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 338 YSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI 397
GN KA +LFRE + + A D+
Sbjct: 64 NLRSGNWEKA-------------------------------VELFREMQFSGAKAYDS-T 91
Query: 398 IVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVT 457
+V +L C+ + + G+Q H Y+LR L + + ++L+ MYS+ G + + K F +
Sbjct: 92 MVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFN--S 149
Query: 458 DSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGL 513
DR++ +N +++ Y G+ + AI L EM LKPD +T+ +LLS +GL
Sbjct: 150 MKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGL 205
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/607 (29%), Positives = 298/607 (49%), Gaps = 74/607 (12%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N +I +Y+K + A LF+ +++++S+ ++LS Y + A++LF M ++
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK-QNALHKEAMELFTSM--SKF 344
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ D +++L A L + +G Q+H+Y +K + +SLIDMY+KC +A
Sbjct: 345 GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
VF + AA D V +N +I GY + G
Sbjct: 405 RKVF------------DIFAAA---------------------DVVLFNAMIEGYSRLGT 431
Query: 243 ---MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 299
+ AL +F +M + I + T S+L A L L L K +H L+ K + F
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 300 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 359
S ++D Y C ++ ++ +FD + ++
Sbjct: 492 GSALIDVYSNCYCLK-------------------------------DSRLVFDEMKVKDL 520
Query: 360 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 419
V+W ++ +GYV+ + E LF E + + PD N++ A A++ LG++ H
Sbjct: 521 VIWNSMFAGYVQQSENEEALNLFLELQLSRER-PDEFTFANMVTAAGNLASVQLGQEFHC 579
Query: 420 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 479
+L+ L + + +AL+DMY+KCG+ A K+F + + RDV+ +N +I+ YA+HG
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD--SAASRDVVCWNSVISSYANHGEG 637
Query: 480 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 539
KA+Q+ ++M+ ++P+ ITFV +LSAC H GLVE G K F M + + PE HY C
Sbjct: 638 KKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVC 696
Query: 540 MVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADN 599
MV + GR +L KA E + K+P + A +W + L+ C N L + A E + + +
Sbjct: 697 MVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKD 756
Query: 600 GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKA 659
+ L+N+YA++G W E ++R+ M+ + K PG SWI + +H+F S D SH KA
Sbjct: 757 SGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKA 816
Query: 660 DAIYSTL 666
+ IY L
Sbjct: 817 NQIYEVL 823
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 233/503 (46%), Gaps = 80/503 (15%)
Query: 57 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 116
R+ + +I Y+K N+ AR +FD+ + V++ +M+S G V+L LF
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM-GRSYVSLQLF-- 237
Query: 117 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 176
Q D + D L+T+L+ + L + GKQ+H+++++ ++ ++ LID Y KC
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 177 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 236
G A+ +F+G + +KN +SW TL++G
Sbjct: 298 GRVIAAHKLFNG------MPNKN---------------------------IISWTTLLSG 324
Query: 237 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 296
Y QN + A+ LF M + G++ + + +S+L++C L L G VHA +K + ++
Sbjct: 325 YKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 297 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 356
+V++ ++D Y KC +T A+++FD +
Sbjct: 385 SYVTNSLIDMYAKC-------------------------------DCLTDARKVFDIFAA 413
Query: 357 RNYVVWTALCSGYVK---SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 413
+ V++ A+ GY + + +FR+ R + P + V++L A A +L L
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR-FRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 414 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIA 471
KQ H + + LN+D SAL+D+YS C Y K +LV D +D++++N M A
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNC----YCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 472 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS-MKEDYNV 530
GY +A+ LF E+ +PD TF +++A + V+LG++F +K
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC 588
Query: 531 LPEIYHYACMVDMYGRGNQLEKA 553
P I + ++DMY + E A
Sbjct: 589 NPYITN--ALLDMYAKCGSPEDA 609
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/537 (26%), Positives = 244/537 (45%), Gaps = 90/537 (16%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N +I Y +A + AR +F+ R+LVS+++M+SA G +L +F R
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA-CNHHGIYEESLVVFLEFWRTRK 141
Query: 123 TIGMDEITLTTMLN----LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGS 178
+E L++ + L + R + + Q+ S++VK+ D + + LID Y K
Sbjct: 142 D-SPNEYILSSFIQACSGLDGRGRWMVF--QLQSFLVKSGFDRDVYVGTLLIDFYLK--- 195
Query: 179 FREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV 238
DG +D A VF PE TV+W T+I+G V
Sbjct: 196 -----------------------------DGNIDYARLVFDALPE-KSTVTWTTMISGCV 225
Query: 239 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 298
+ G +L LF +++E + + + L++VLSAC+ L L+ GK +HA +L+ +
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDAS 285
Query: 299 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 358
+ + ++D Y KCG + A +LF+ + +N
Sbjct: 286 LMNVLIDSYVKCGRV-------------------------------IAAHKLFNGMPNKN 314
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
+ WT L SGY ++ + +LF + L PD ++L +CA L G Q H
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSILTSCASLHALGFGTQVH 373
Query: 419 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 478
AY ++ L D + ++L+DMY+KC + A K F + +D V+L+N MI GY+ G
Sbjct: 374 AYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAAD--VVLFNAMIEGYSRLGT 431
Query: 479 E---NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG-EKFFMSMKEDYNVLPEI 534
+ ++A+ +F++M ++P +TFV+LL A L LG K + Y + +I
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS--ASLTSLGLSKQIHGLMFKYGLNLDI 489
Query: 535 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEE 591
+ + ++D+Y L+ + ++ ++ D IW + V+Q+E E
Sbjct: 490 FAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAG--------YVQQSENE 537
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 158/317 (49%), Gaps = 34/317 (10%)
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
+D N ++ R G M A VF K PE N VSW+T+++ +G E +L +F+E
Sbjct: 77 LDTYLSNILINLYSRAGGMVYARKVFEKMPERN-LVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 253 MIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCG 311
+ N++ L+S + AC+GL DG +++ + F K G
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGL----------------DG-RGRWMVFQLQSFLVKSG 178
Query: 312 NMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK 371
+ VY G + LI Y GN+ A+ +FD+L E++ V WT + SG VK
Sbjct: 179 ---FDRDVYVG---------TLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 372 SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK 431
+ +LF + + ++PD I+ VL AC+I L GKQ HA+ILR L MD
Sbjct: 227 MGRSYVSLQLFYQL-MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDAS 285
Query: 432 LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 491
L + L+D Y KCG + A K F + ++++I + +++GY + +A++LF M K
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGM--PNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Query: 492 ISLKPDAITFVALLSAC 508
LKPD ++L++C
Sbjct: 344 FGLKPDMYACSSILTSC 360
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 211/506 (41%), Gaps = 113/506 (22%)
Query: 21 KSGLASSIFTCNQLI-HLYSIH--GLLQEAHKLFDKMPHRN-AFSWNAIIMAYIKAHNLT 76
K GL ++ C+ ++ S+H G + H K N ++ N++I Y K LT
Sbjct: 343 KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT 402
Query: 77 QARALFDSASHRDLVSYNSMLSAYA--GADGCDTVALDLF--ARMQSARDTIGMDEITLT 132
AR +FD + D+V +N+M+ Y+ G AL++F R + R ++ +T
Sbjct: 403 DARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSL----LTFV 458
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
++L SA L + KQ+H M K +L FA S+LID+YS C
Sbjct: 459 SLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC---------------- 502
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
C +D ++ VF + D V WN++ AGYVQ E AL LF+E
Sbjct: 503 -----------YCLKDSRL-----VF-DEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE 545
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
+ ++ T A++++A L ++LG+ H +LK N ++++ ++D Y KCG
Sbjct: 546 LQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG- 604
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
SP A + FDS + R+ V W ++ S Y
Sbjct: 605 --------------SP----------------EDAHKAFDSAASRDVVCWNSVISSYANH 634
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
+ + ++ + +E + P+ + V VL AC+ + G + +LR + + +
Sbjct: 635 GEGKKALQMLEKM-MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEH 693
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
+V + + G + NKA +L ++M
Sbjct: 694 YVCMVSLLGRAGRL---------------------------------NKARELIEKM--- 717
Query: 493 SLKPDAITFVALLSACRHRGLVELGE 518
KP AI + +LLS C G VEL E
Sbjct: 718 PTKPAAIVWRSLLSGCAKAGNVELAE 743
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 417 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 476
H I+ L +D L++ L+++YS+ G + YA K F+ + +R+++ ++ M++ HH
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKM--PERNLVSWSTMVSACNHH 123
Query: 477 GFENKAIQLFQEMLKISL-KPDAITFVALLSAC-----RHRGLVELGEKFFMSMKEDYNV 530
G +++ +F E + P+ + + AC R R +V + F + D +V
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 531 LPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNAC 576
Y ++D Y + ++ A +P + T W ++ C
Sbjct: 184 ----YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVT-WTTMISGC 224
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 184/682 (26%), Positives = 325/682 (47%), Gaps = 109/682 (15%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N I+ Y K +L AR +FD R+LVSY S+++ Y+ +G A+ L+ +M ++
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYS-QNGQGAEAIRLYLKM--LQE 162
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ D+ +++ A V GKQ+H+ ++K
Sbjct: 163 DLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKL------------------------- 197
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
+ L+++NA++A R +M A VF+ P D +SW+++IAG+ Q G+
Sbjct: 198 -------ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP-MKDLISWSSIIAGFSQLGF 249
Query: 243 MERALTLFIEMIEKGIEY-NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 301
AL+ EM+ G+ + N++ S L AC+ L G +H L +K++ N
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 302 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF---------- 351
+ D Y +CG + A V+ I + + +IAG ++ G +A +F
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 352 DSLSER-------------------NYVV-W---------TALCSGYVKSQQCEAVFKLF 382
D++S R +Y++ W +L + Y F LF
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLF 429
Query: 383 REFRTTEALI-------------------------------PDTMIIVNVLGACAIQATL 411
+FR + PD + + N+L C ++L
Sbjct: 430 EDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSL 489
Query: 412 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 471
LG Q H Y L+T L ++ + + L+DMY+KCG++ A + F + +RDV+ ++ +I
Sbjct: 490 KLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD--SMDNRDVVSWSTLIV 547
Query: 472 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVL 531
GYA GF +A+ LF+EM ++P+ +TFV +L+AC H GLVE G K + +M+ ++ +
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS 607
Query: 532 PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEE 591
P H +C+VD+ R +L +A F+ ++ ++ D +W L+ACK N L ++A E
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAEN 667
Query: 592 LLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTS 651
+LK++ N + +V L +++A+ G W +R M+ + K+PG SWI +E+ IH+F +
Sbjct: 668 ILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFA 727
Query: 652 GDTSHSKADAIYSTLVCLYGKL 673
D H + D IY+ L ++ ++
Sbjct: 728 EDIFHPERDDIYTVLHNIWSQM 749
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 164/366 (44%), Gaps = 66/366 (18%)
Query: 142 RVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAM 201
R + G+++H +++ + + ++ MY KCGS R+A VF D +
Sbjct: 81 RSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVF-------DFM----- 128
Query: 202 VAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYN 261
PE N VS+ ++I GY QNG A+ L+++M+++ + +
Sbjct: 129 --------------------PERN-LVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 262 QHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA 321
Q S++ AC + LGK +HA V+K + S+ + ++ Y + M A V+
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 322 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKL 381
GI +K + SS+IAG+S G F++LS
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFE------FEALSH------------------------- 256
Query: 382 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYS 441
+E + P+ I + L AC+ G Q H ++++L + +L DMY+
Sbjct: 257 LKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYA 316
Query: 442 KCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITF 501
+CG + A + F + D +NV+IAG A++G+ ++A+ +F +M PDAI+
Sbjct: 317 RCGFLNSARRVFDQIERP--DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374
Query: 502 VALLSA 507
+LL A
Sbjct: 375 RSLLCA 380
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 35/246 (14%)
Query: 264 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 323
T S++ AC+ + L G+ +H +L ++ + +++ I+ Y KCG++R A V+ +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 324 GIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFR 383
++ + +S+I GYS G +A RL Y+K Q
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRL------------------YLKMLQ--------- 161
Query: 384 EFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 443
E L+PD +++ ACA + + LGKQ HA +++ + + +AL+ MY +
Sbjct: 162 -----EDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRF 216
Query: 444 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL-KPDAITFV 502
++ A + F + +D+I ++ +IAG++ GFE +A+ +EML + P+ F
Sbjct: 217 NQMSDASRVFYGIP--MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 503 ALLSAC 508
+ L AC
Sbjct: 275 SSLKAC 280
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 399 VNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 458
++++ AC+ +L+ G++ H +IL + D L + ++ MY KCG++ A + F + +
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 459 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 518
R+++ Y +I GY+ +G +AI+L+ +ML+ L PD F +++ AC V LG+
Sbjct: 131 --RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 519 KFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFL 573
+ + + + I A ++ MY R NQ+ A IP++ D W + +
Sbjct: 189 QLHAQVIKLESSSHLIAQNA-LIAMYVRFNQMSDASRVFYGIPMK-DLISWSSII 241
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 42/218 (19%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H ++K+GLA F N LI +Y+ G L +A ++FD M +R+ SW+ +I+ Y ++
Sbjct: 496 HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQS--- 552
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
G AL LF M+SA I + +T +L
Sbjct: 553 -----------------------------GFGEEALILFKEMKSA--GIEPNHVTFVGVL 581
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLS--KFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
+ + +V G ++++ M +T + +S K S ++D+ ++ G EA
Sbjct: 582 TACSHVGLVEEGLKLYATM-QTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEP 640
Query: 194 DLVSKNAMVAACCRDGKMDMAL----NVFWKNPEFNDT 227
D+V +++AC G + +A N+ +P FN T
Sbjct: 641 DVVVWKTLLSACKTQGNVHLAQKAAENILKIDP-FNST 677
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 189/656 (28%), Positives = 316/656 (48%), Gaps = 113/656 (17%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H IK G S ++ CN LI LY G +A K+F++MP
Sbjct: 153 HAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE------------------- 193
Query: 76 TQARALFDSASHRDLVSYNSMLSAY-AGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
RD+VS+NSM+S Y A DG + L LF M G +TM
Sbjct: 194 ------------RDIVSWNSMISGYLALGDGFSS--LMLFKEMLKC----GFKPDRFSTM 235
Query: 135 LNLSAKLRVVC--YGKQMHSYMVKTANDLSK-FALSSLIDMYSKCGSFREAYNVFSGCDG 191
L A V GK++H + V++ + ++S++DMYSK G A +F+G
Sbjct: 236 SALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNG--- 292
Query: 192 VVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFI 251
++ +N V+WN +I Y +NG + A F
Sbjct: 293 ---MIQRN---------------------------IVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 252 EMIEK-GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 310
+M E+ G++ + T ++L A L+ G+ +H ++ + + + ++D Y +C
Sbjct: 323 KMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 311 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 370
G ++ AE + FD ++E+N + W ++ + YV
Sbjct: 379 GQLKSAEVI-------------------------------FDRMAEKNVISWNSIIAAYV 407
Query: 371 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 430
++ + + +LF+E + +L+PD+ I ++L A A +LS G++ HAYI++++ +
Sbjct: 408 QNGKNYSALELFQELWDS-SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNT 466
Query: 431 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
+ ++LV MY+ CG++ A K F + +DV+ +N +I YA HGF ++ LF EM+
Sbjct: 467 IILNSLVHMYAMCGDLEDARKCFNHILL--KDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Query: 491 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 550
+ P+ TF +LL+AC G+V+ G ++F SMK +Y + P I HY CM+D+ GR
Sbjct: 525 ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNF 584
Query: 551 EKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVY 610
A F+ ++P A IWG+ LNA + + + T+ + A E++ K+E DN YV L N+Y
Sbjct: 585 SAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMY 644
Query: 611 AAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
A G+W ++ RI+ M K ++ S + + HVFT+GD SH + IY L
Sbjct: 645 AEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 215/506 (42%), Gaps = 108/506 (21%)
Query: 3 SLIVRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSW 62
S I + A +V RD + K ++ + + ++ L+++A +LFD+M +AF W
Sbjct: 42 SGISKPARLVLRDRYKVTKQVNDPAL---TRALRGFADSRLMEDALQLFDEMNKADAFLW 98
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N +I + G A+ ++RM A
Sbjct: 99 NVMIKGFTSC--------------------------------GLYIEAVQFYSRMVFA-- 124
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ D T ++ A + + GK++H+ ++K + +SLI +Y K G
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLG----- 179
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
C D A VF + PE D VSWN++I+GY+ G
Sbjct: 180 ----------------------CAWD-----AEKVFEEMPE-RDIVSWNSMISGYLALGD 211
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND-GCSNQFVSS 301
+L LF EM++ G + ++ + S L AC+ + K+GK +H +++ + V +
Sbjct: 212 GFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMT 271
Query: 302 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 361
I+D Y K G + YAE R+F+ + +RN V
Sbjct: 272 SILDMYSKYGEVSYAE-------------------------------RIFNGMIQRNIVA 300
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
W + Y ++ + F F++ L PD + +N+L A AI G+ H Y
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYA 356
Query: 422 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 481
+R L +AL+DMY +CG + AE F + ++++VI +N +IA Y +G
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM--AEKNVISWNSIIAAYVQNGKNYS 414
Query: 482 AIQLFQEMLKISLKPDAITFVALLSA 507
A++LFQE+ SL PD+ T ++L A
Sbjct: 415 ALELFQELWDSSLVPDSTTIASILPA 440
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 138/323 (42%), Gaps = 15/323 (4%)
Query: 266 ASVLSACTGLKCLKLGKCV----HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA 321
A++LS C + KCV H K +G N SGI K + +
Sbjct: 3 ATLLSQCYRIYNSDACKCVSSENHQTTGKRNGNRNLEFDSGI----SKPARLVLRDRYKV 58
Query: 322 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK-SQQCEAVFK 380
+ P T +L G++ M A +LFD +++ + +W + G+ EAV
Sbjct: 59 TKQVNDPALTRAL-RGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV-- 115
Query: 381 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMY 440
F + DT V+ + A ++L GK+ HA +++ D + ++L+ +Y
Sbjct: 116 QFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY 175
Query: 441 SKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 500
K G AEK F+ + + RD++ +N MI+GY G ++ LF+EMLK KPD +
Sbjct: 176 MKLGCAWDAEKVFEEMPE--RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 501 FVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
++ L AC H ++G++ ++ ++DMY + ++ A +
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM 293
Query: 561 PIQIDATIWGAFLNACKINNNTT 583
IQ + W + N T
Sbjct: 294 -IQRNIVAWNVMIGCYARNGRVT 315
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/539 (30%), Positives = 277/539 (51%), Gaps = 68/539 (12%)
Query: 124 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 183
I D T+L +++ G+ +H++++++ ++L++MY+KCGS EA
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 184 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 243
VF K P+ D V+W TLI+GY Q+
Sbjct: 116 K--------------------------------VFEKMPQ-RDFVTWTTLISGYSQHDRP 142
Query: 244 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 303
AL F +M+ G N+ TL+SV+ A + G C H L
Sbjct: 143 CDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER---RGCCGHQLH--------------- 184
Query: 304 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 363
F KCG + +V+ G S+L+ Y+ G M A+ +FD+L RN V W
Sbjct: 185 -GFCVKCG---FDSNVHVG---------SALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231
Query: 364 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 423
AL +G+ + E +LF+ + P ++ GAC+ L GK HAY+++
Sbjct: 232 ALIAGHARRSGTEKALELFQGM-LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 424 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 483
+ + + L+DMY+K G+I A K F + + RDV+ +N ++ YA HGF +A+
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL--AKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 484 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 543
F+EM ++ ++P+ I+F+++L+AC H GL++ G ++ MK+D ++PE +HY +VD+
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDL 407
Query: 544 YGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRY 603
GR L +A+ F+ ++PI+ A IW A LNAC+++ NT L A E + +++ D+ +
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467
Query: 604 VQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 662
V L N+YA+ G+WN+ R+RK+M+ K P CSW+ +EN IH+F + D H + + I
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/526 (23%), Positives = 213/526 (40%), Gaps = 117/526 (22%)
Query: 40 IHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSA 99
I G + AH L H + N ++ Y K +L +AR +F+ RD V++ +++S
Sbjct: 77 IQGRIVHAHILQSIFRH-DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 100 YAGAD-GCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTA 158
Y+ D CD AL F +M R +E TL++++ +A R C G Q+H + VK
Sbjct: 136 YSQHDRPCD--ALLFFNQM--LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 191
Query: 159 NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF 218
D + S+L+D+Y++ G +A VF + D VS NA++
Sbjct: 192 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNALI---------------- 234
Query: 219 WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL 278
AG+ + E+AL LF M+ G + + AS+ AC+ L
Sbjct: 235 ----------------AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFL 278
Query: 279 KLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGY 338
+ GK VHA ++K+ F + ++D Y K G++ A
Sbjct: 279 EQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA---------------------- 316
Query: 339 SSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 398
+++FD L++R+ V W +L + Y + + F E R + P+ +
Sbjct: 317 ---------RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV-GIRPNEISF 366
Query: 399 VNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 458
++VL AC+ L G + + + + + +VD+ + G++
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL------------ 414
Query: 459 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG- 517
N+A++ +EM ++P A + ALL+ACR ELG
Sbjct: 415 ---------------------NRALRFIEEM---PIEPTAAIWKALLNACRMHKNTELGA 450
Query: 518 ---EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
E F +D P + Y ++Y G + A +K+
Sbjct: 451 YAAEHVFELDPDDPG--PHVILY----NIYASGGRWNDAARVRKKM 490
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 128/301 (42%), Gaps = 67/301 (22%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +K G S++ + L+ LY+ +GL+ +A +FD + RN SWNA+I
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI--------- 234
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+ +A G + AL+LF M RD + ++
Sbjct: 235 ----------------------AGHARRSGTEK-ALELFQGM--LRDGFRPSHFSYASLF 269
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + GK +H+YM+K+ L FA ++L+DMY+K GS +A +F D
Sbjct: 270 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF-------DR 322
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
++K D VSWN+L+ Y Q+G+ + A+ F EM
Sbjct: 323 LAK--------------------------RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
GI N+ + SVL+AC+ L G + L+ K+ + +VD + G++
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 316 A 316
A
Sbjct: 417 A 417
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/596 (30%), Positives = 299/596 (50%), Gaps = 73/596 (12%)
Query: 45 QEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGAD 104
++ H K+P + ++ Y K + A +F+ + R++V + SM++ Y D
Sbjct: 162 KKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKND 221
Query: 105 GCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKF 164
C+ L LF RM+ + +G +E T T++ KL + GK H +VK+ +LS
Sbjct: 222 LCEE-GLVLFNRMRE-NNVLG-NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC 278
Query: 165 ALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEF 224
++SL+DMY KCG A VF+ V
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHV-------------------------------- 306
Query: 225 NDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCV 284
D V W +I GY NG + AL+LF +M I+ N T+ASVLS C ++ L+LG+ V
Sbjct: 307 -DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV 365
Query: 285 HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNM 344
H L +K G + V++ +V Y KC R
Sbjct: 366 HGLSIKV-GIWDTNVANALVHMYAKCYQNR------------------------------ 394
Query: 345 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 404
AK +F+ SE++ V W ++ SG+ ++ LF +E++ P+ + + ++ A
Sbjct: 395 -DAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVASLFSA 452
Query: 405 CAIQATLSLGKQTHAYILRTKL--NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD 462
CA +L++G HAY ++ + + +AL+D Y+KCG+ A F T +++
Sbjct: 453 CASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFD--TIEEKN 510
Query: 463 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFM 522
I ++ MI GY G +++LF+EMLK KP+ TF ++LSAC H G+V G+K+F
Sbjct: 511 TITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFS 570
Query: 523 SMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNT 582
SM +DYN P HY CMVDM R +LE+A++ + K+PIQ D +GAFL+ C +++
Sbjct: 571 SMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRF 630
Query: 583 TLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCS 638
L + +++L + D+ S YV ++N+YA++G+WN+ +R M+ + +K+ G S
Sbjct: 631 DLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 131/296 (44%), Gaps = 19/296 (6%)
Query: 287 LVLKNDGCSNQFV-SSGIVDFYCKCGN---MRYAESVYAGIGIKSPFATSS-LIAGYSSK 341
L +NDG S + SS KC N +R + V G G+ + ++ L++ Y
Sbjct: 30 LTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFF 89
Query: 342 GNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNV 401
G A+ +FD + E ++ +W + Y +++ V KL+ + D ++
Sbjct: 90 GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY-DLLMKHGFRYDDIVFSKA 148
Query: 402 LGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR 461
L AC L GK+ H +++ + D + + L+DMY+KCG I A K F +T R
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDIT--LR 205
Query: 462 DVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF 521
+V+ + MIAGY + + + LF M + ++ + T+ L+ AC + G+ F
Sbjct: 206 NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFH 265
Query: 522 MSMKEDYNVLPEIYHYACMV----DMYGRGNQLEKAVEFMRKIPIQIDATIWGAFL 573
+ V I +C+V DMY + + A + +D +W A +
Sbjct: 266 GCL-----VKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS-HVDLVMWTAMI 315
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 265/486 (54%), Gaps = 19/486 (3%)
Query: 217 VFWKNPEFN------DTVSWNTLIAGYVQN---GYMERALTLFIEMIEKGIEYNQHTLAS 267
+ + NP F+ ++ WN +I V N +++++ M + + HT
Sbjct: 8 IAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
+L + L LG+ HA +L + FV + +++ Y CG++R A+ V+ G K
Sbjct: 68 LLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKD 127
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF-- 385
A +S++ Y+ G + A++LFD + ERN + W+ L +GYV + + LFRE
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 386 -RTTEALI-PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 443
+ EA + P+ + VL AC L GK HAYI + + +D L +AL+DMY+KC
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKC 247
Query: 444 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI-SLKPDAITFV 502
G++ A++ F + S +DV Y+ MI A +G ++ QLF EM ++ P+++TFV
Sbjct: 248 GSLERAKRVFNAL-GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 503 ALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPI 562
+L AC HRGL+ G+ +F M E++ + P I HY CMVD+YGR +++A F+ +P+
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 563 QIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRI 622
+ D IWG+ L+ ++ + + A + L++++ N YV L+NVYA G+W E+ I
Sbjct: 367 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCI 426
Query: 623 RKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL----YLTFT 678
R EM K K+PGCS++ VE +H F GD S +++ IY+ L + +L Y+T T
Sbjct: 427 RHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDT 486
Query: 679 ELKQLD 684
+ LD
Sbjct: 487 KEVLLD 492
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 177/370 (47%), Gaps = 43/370 (11%)
Query: 110 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 169
+ ++ RM++ R + D T +L + G++ H+ ++ D F +SL
Sbjct: 46 PISVYLRMRNHR--VSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSL 103
Query: 170 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS 229
++MYS CG R A VF G DL + N++V A + G +D A +F + PE N +S
Sbjct: 104 LNMYSSCGDLRSAQRVFDD-SGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERN-VIS 161
Query: 230 WNTLIAGYVQNGYMERALTLFIEMI-----EKGIEYNQHTLASVLSACTGLKCLKLGKCV 284
W+ LI GYV G + AL LF EM E + N+ T+++VLSAC L L+ GK V
Sbjct: 162 WSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWV 221
Query: 285 HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNM 344
HA + K + + + ++D Y KCG++
Sbjct: 222 HAYIDKYHVEIDIVLGTALIDMYAKCGSLE------------------------------ 251
Query: 345 TKAKRLFDSL-SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 403
+AKR+F++L S+++ ++A+ + F+LF E T++ + P+++ V +LG
Sbjct: 252 -RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILG 310
Query: 404 ACAIQATLSLGKQTHAYILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD 462
AC + ++ GK ++ + + +VD+Y + G I AE SF + D
Sbjct: 311 ACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAE-SFIASMPMEPD 369
Query: 463 VILYNVMIAG 472
V+++ +++G
Sbjct: 370 VLIWGSLLSG 379
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 168/369 (45%), Gaps = 44/369 (11%)
Query: 14 RDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAH 73
R H Q + GL F L+++YS G L+ A ++FD ++ +WN+++ AY KA
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 74 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT---IGMDEIT 130
+ AR LFD R+++S++ +++ Y G ALDLF MQ + + +E T
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMC-GKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 131 LTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCD 190
++T+L+ +L + GK +H+Y+ K ++ ++LIDMY+KCGS A VF+
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 191 GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 250
D+ + +AM+ CC +A Y G + LF
Sbjct: 262 SKKDVKAYSAMI--CC---------------------------LAMY---GLTDECFQLF 289
Query: 251 IEM-IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYC 308
EM I N T +L AC + GK ++++ G + G +VD Y
Sbjct: 290 SEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYG 349
Query: 309 KCGNMRYAESVYAGIGIKSP-FATSSLIAGYSSKGNMTKA----KRLFDSLSERNYVVWT 363
+ G ++ AES A + ++ SL++G G++ KRL + L N +
Sbjct: 350 RSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIE-LDPMNSGAYV 408
Query: 364 ALCSGYVKS 372
L + Y K+
Sbjct: 409 LLSNVYAKT 417
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 285 bits (729), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 181/661 (27%), Positives = 326/661 (49%), Gaps = 81/661 (12%)
Query: 12 VYRDHVQAIKSGLASSIFTCNQLIHL---YSIHGLLQEAHKLFDKMPHRNAFSWNAIIMA 68
++RD + L ++ C +L + IHG +++ D + + +++I
Sbjct: 51 MFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKK-----DVTLGSDLYVGSSLIYM 105
Query: 69 YIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDE 128
YIK + +A +FD D+V+++SM+S + +G A++ F RM A D + D
Sbjct: 106 YIKCGRMIEALRMFDELEKPDIVTWSSMVSGFE-KNGSPYQAVEFFRRMVMASD-VTPDR 163
Query: 129 ITLTTMLNLSAKLRVVCYGKQMHSYMVKT--ANDLSKFALSSLIDMYSKCGSFREAYNVF 186
+TL T+++ KL G+ +H ++++ +NDLS ++SL++ Y+K +F+EA N+F
Sbjct: 164 VTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS--LVNSLLNCYAKSRAFKEAVNLF 221
Query: 187 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 246
M+A D +SW+T+IA YVQNG A
Sbjct: 222 K-------------MIAE--------------------KDVISWSTVIACYVQNGAAAEA 248
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 306
L +F +M++ G E N T+ VL AC L+ G+ H L ++ + VS+ +VD
Sbjct: 249 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 307 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 366
Y KC + E YA +F + ++ V W AL
Sbjct: 309 YMKCFS---PEEAYA----------------------------VFSRIPRKDVVSWVALI 337
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 426
SG+ + + F PD +++V VLG+C+ L K H+Y+++
Sbjct: 338 SGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGF 397
Query: 427 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLF 486
+ + + ++LV++YS+CG++ A K F + + +D +++ +I GY HG KA++ F
Sbjct: 398 DSNPFIGASLVELYSRCGSLGNASKVFNGI--ALKDTVVWTSLITGYGIHGKGTKALETF 455
Query: 487 QEMLKIS-LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 545
M+K S +KP+ +TF+++LSAC H GL+ G + F M DY + P + HYA +VD+ G
Sbjct: 456 NHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLG 515
Query: 546 RGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 605
R L+ A+E +++P I G L AC+I+ N + + ++L ++E+++ Y+
Sbjct: 516 RVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYML 575
Query: 606 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYST 665
++NVY +G+W + ++R ++ + K S I + +H F + D H + + +Y
Sbjct: 576 MSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGL 635
Query: 666 L 666
L
Sbjct: 636 L 636
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/511 (25%), Positives = 226/511 (44%), Gaps = 79/511 (15%)
Query: 78 ARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNL 137
AR +F + R L +N++L + + + V L F+ M RD D TL L
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEV-LYHFSHM--FRDEEKPDNFTLPVALKA 69
Query: 138 SAKLRVVCYGKQMHSYM---VKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
+LR V YG+ +H ++ V +DL + SSLI MY KCG EA +F
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDL--YVGSSLIYMYIKCGRMIEALRMFDEL----- 122
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
E D V+W+++++G+ +NG +A+ F M+
Sbjct: 123 ----------------------------EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154
Query: 255 -EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
+ ++ TL +++SACT L +LG+CVH V++ G SN
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR-GFSNDLS-------------- 199
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
+SL+ Y+ +A LF ++E++ + W+ + + YV++
Sbjct: 200 ----------------LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
+F + + P+ ++ VL ACA L G++TH +R L + K++
Sbjct: 244 AAAEALLVFNDM-MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS 302
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM-LKI 492
+ALVDMY KC + A F + +DV+ + +I+G+ +G +++I+ F M L+
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRI--PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
+ +PDAI V +L +C G +E K F S Y + A +V++Y R L
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 553 AVEFMRKIPIQIDATIWGAFLNACKINNNTT 583
A + I ++ D +W + + I+ T
Sbjct: 420 ASKVFNGIALK-DTVVWTSLITGYGIHGKGT 449
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 186/621 (29%), Positives = 300/621 (48%), Gaps = 79/621 (12%)
Query: 59 AFSWN-----AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 113
F W+ ++I Y + + AR LFD RD+ S+N+M+S Y + G AL L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS-GNAKEALTL 238
Query: 114 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 173
+++ MD +T+ ++L+ + G +HSY +K + F + LID+Y
Sbjct: 239 SNGLRA------MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 174 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 233
++ G R+ VF +M + D +SWN++
Sbjct: 293 AEFGRLRDCQKVFD----------------------RMYV-----------RDLISWNSI 319
Query: 234 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 293
I Y N RA++LF EM I+ + TL S+ S + L ++ + V L+
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
Query: 294 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 353
+ E + G ++++ Y+ G + A+ +F+
Sbjct: 380 ---------------------FLEDITIG---------NAVVVMYAKLGLVDSARAVFNW 409
Query: 354 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 413
L + + W + SGY ++ +++ + + V+VL AC+ L
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 414 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR-DVILYNVMIAG 472
G + H +L+ L +D + ++L DMY KCG + E + L R + + +N +IA
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL---EDALSLFYQIPRVNSVPWNTLIAC 526
Query: 473 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 532
+ HG KA+ LF+EML +KPD ITFV LLSAC H GLV+ G+ F M+ DY + P
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586
Query: 533 EIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEEL 592
+ HY CMVDMYGR QLE A++F++ + +Q DA+IWGA L+AC+++ N L K A E L
Sbjct: 587 SLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHL 646
Query: 593 LKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSG 652
+VE ++ +V L+N+YA+ GKW + IR GK K PG S + V+N + VF +G
Sbjct: 647 FEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTG 706
Query: 653 DTSHSKADAIYSTLVCLYGKL 673
+ +H + +Y L L KL
Sbjct: 707 NQTHPMYEEMYRELTALQAKL 727
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 90/172 (52%), Gaps = 9/172 (5%)
Query: 411 LSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMI 470
L K HA ++ +K + +++ LV++Y GN+A A +F + +RDV +N+MI
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHI--QNRDVYAWNLMI 124
Query: 471 AGYAHHGFENKAIQLFQE-MLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYN 529
+GY G ++ I+ F ML L PD TF ++L AC R +++ + +++K +
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC--RTVIDGNKIHCLALK--FG 180
Query: 530 VLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA-CKINN 580
+ ++Y A ++ +Y R + A ++P++ D W A ++ C+ N
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGN 231
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 183/612 (29%), Positives = 315/612 (51%), Gaps = 73/612 (11%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
NA+I Y + + QA + ++ D+V++NS++ Y + AL+ F+ M +A
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV-QNLMYKEALEFFSDMIAAGH 382
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
DE+++T+++ S +L + G ++H+Y++K D + ++LIDMYSKC
Sbjct: 383 K--SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN----- 435
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
C G+ + ++ D +SW T+IAGY QN
Sbjct: 436 ---------------------LTCYMGRAFLRMHD-------KDLISWTTVIAGYAQNDC 467
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
AL LF ++ +K +E ++ L S+L A + LK + + K +H +L+ G + + +
Sbjct: 468 HVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK-GLLDTVIQNE 526
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
+VD Y KC NM YA R+F+S+ ++ V W
Sbjct: 527 LVDVYGKCRNMGYA-------------------------------TRVFESIKGKDVVSW 555
Query: 363 TAL-CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
T++ S + + EAV +LFR T L D++ ++ +L A A + L+ G++ H Y+
Sbjct: 556 TSMISSSALNGNESEAV-ELFRRMVET-GLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 422 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 481
LR ++ +A A+VDMY+ CG++ A+ F + + ++ Y MI Y HG
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI--ERKGLLQYTSMINAYGMHGCGKA 671
Query: 482 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 541
A++LF +M ++ PD I+F+ALL AC H GL++ G F M+ +Y + P HY C+V
Sbjct: 672 AVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLV 731
Query: 542 DMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 601
DM GR N + +A EF++ + + A +W A L AC+ ++ + + A + LL++E N
Sbjct: 732 DMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPG 791
Query: 602 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADA 661
V ++NV+A +G+WN++ ++R +M+ K PGCSWI ++ +H FT+ D SH ++
Sbjct: 792 NLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKE 851
Query: 662 IYSTLVCLYGKL 673
IY L + KL
Sbjct: 852 IYEKLSEVTRKL 863
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 235/500 (47%), Gaps = 76/500 (15%)
Query: 9 ALVVYRD-HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP-HRNAFSWNAII 66
AL +Y + V+ + GL+S L I E H L K+ H F NA++
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG-SELHSLLVKLGYHSTGFIVNALV 224
Query: 67 MAYIKAHNLTQARALFDSASHR-DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIG 125
Y K +L+ AR LFD + D V +NS+LS+Y+ G L+LF M
Sbjct: 225 SMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS-TSGKSLETLELFREMHMTGP--A 281
Query: 126 MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK-FALSSLIDMYSKCGSFREAYN 184
+ T+ + L GK++H+ ++K++ S+ + ++LI MY++CG +A
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 341
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 244
+ +M+ A D V+WN+LI GYVQN +
Sbjct: 342 ILR----------------------QMNNA-----------DVVTWNSLIKGYVQNLMYK 368
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 304
AL F +MI G + ++ ++ S+++A L L G +HA V+K+ SN V + ++
Sbjct: 369 EALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLI 428
Query: 305 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 364
D Y KC N+ + Y G R F + +++ + WT
Sbjct: 429 DMYSKC-NL----TCYMG--------------------------RAFLRMHDKDLISWTT 457
Query: 365 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 424
+ +GY ++ +LFR+ I D MI+ ++L A ++ ++ + K+ H +ILR
Sbjct: 458 VIAGYAQNDCHVEALELFRDVAKKRMEI-DEMILGSILRASSVLKSMLIVKEIHCHILRK 516
Query: 425 KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 484
L +D + + LVD+Y KC N+ YA + F+ + +DV+ + MI+ A +G E++A++
Sbjct: 517 GL-LDTVIQNELVDVYGKCRNMGYATRVFESI--KGKDVVSWTSMISSSALNGNESEAVE 573
Query: 485 LFQEMLKISLKPDAITFVAL 504
LF+ M++ L D++ + +
Sbjct: 574 LFRRMVETGLSADSVALLCI 593
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/532 (23%), Positives = 230/532 (43%), Gaps = 97/532 (18%)
Query: 65 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 124
++ Y K +L A +FD R ++N+M+ AY ++G AL L+ M+ +
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV-SNGEPASALALYWNMRVEGVPL 180
Query: 125 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 184
G+ + +L AKLR + G ++HS +VK + F +++L+ MY+K A
Sbjct: 181 GLS--SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR 238
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 244
+F G E D V WN++++ Y +G
Sbjct: 239 LFDGFQ--------------------------------EKGDAVLWNSILSSYSTSGKSL 266
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ-FVSSGI 303
L LF EM G N +T+ S L+AC G KLGK +HA VLK+ S++ +V + +
Sbjct: 267 ETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNAL 326
Query: 304 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 363
+ Y +CG M AE R+ ++ + V W
Sbjct: 327 IAMYTRCGKMPQAE-------------------------------RILRQMNNADVVTWN 355
Query: 364 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 423
+L GYV++ + + F + D + + +++ A + L G + HAY+++
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414
Query: 424 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 483
+ + ++ + L+DMYSKC Y ++F + D+D+I + +IAGYA + +A+
Sbjct: 415 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAF--LRMHDKDLISWTTVIAGYAQNDCHVEAL 472
Query: 484 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC---- 539
+LF+++ K ++ D + ++L A S+ + ++ EI+ +
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRAS--------------SVLKSMLIVKEIHCHILRKGL 518
Query: 540 --------MVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTT 583
+VD+YG+ + A I + D W + +++ +N N +
Sbjct: 519 LDTVIQNELVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGNES 569
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 133/288 (46%), Gaps = 7/288 (2%)
Query: 329 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 388
F L+ Y G++ A+++FD + +R W + YV + + + L+ R
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV- 175
Query: 389 EALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAY 448
E + +L ACA + G + H+ +++ + + +ALV MY+K +++
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 449 AEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 508
A + F + D +L+N +++ Y+ G + ++LF+EM P++ T V+ L+AC
Sbjct: 236 ARRLFDGFQEKG-DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 294
Query: 509 RHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATI 568
+LG++ S+ + E+Y ++ MY R ++ +A +R++ D
Sbjct: 295 DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVT 353
Query: 569 WGAFLNACKINNNTTLVKQAEEELLK-VEADNGSRYVQLANVYAAEGK 615
W + + N + K+A E + A + S V + ++ AA G+
Sbjct: 354 WNSLIKGYVQN---LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/605 (29%), Positives = 307/605 (50%), Gaps = 55/605 (9%)
Query: 71 KAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEIT 130
K + +AR LFD RD+V++ +++ Y G A +LF R+ S ++ +T
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKL-GDMREARELFDRVDSRKNV-----VT 111
Query: 131 LTTMLNLSAKLRVVCYGKQMH--SYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG 188
T M +S LR KQ+ + + + + + +++ID Y++ G +A +F
Sbjct: 112 WTAM--VSGYLR----SKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDE 165
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 248
++VS N+MV A + G++D A+N+F + P D VSW ++ G +NG ++ A
Sbjct: 166 MPE-RNIVSWNSMVKALVQRGRIDEAMNLFERMPR-RDVVSWTAMVDGLAKNGKVDEARR 223
Query: 249 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 308
LF M E+ I + ++ Y
Sbjct: 224 LFDCMPERNI---------------------------------------ISWNAMITGYA 244
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 368
+ + A+ ++ + + + +++I G+ M KA LFD + E+N + WT + +G
Sbjct: 245 QNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITG 304
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 428
YV++++ E +F + ++ P+ V++L AC+ A L G+Q H I ++
Sbjct: 305 YVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQK 364
Query: 429 DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQE 488
+E + SAL++MYSK G + A K F RD+I +N MIA YAHHG +AI+++ +
Sbjct: 365 NEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQ 424
Query: 489 MLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGN 548
M K KP A+T++ LL AC H GLVE G +FF + D ++ HY C+VD+ GR
Sbjct: 425 MRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAG 484
Query: 549 QLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLAN 608
+L+ F+ ++ + +GA L+AC ++N ++ K+ +++L+ +D+ YV ++N
Sbjct: 485 RLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSN 544
Query: 609 VYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVC 668
+YAA GK E +R +M+ K K PGCSW+ V H+F GD SH + +A+ S L
Sbjct: 545 IYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSD 604
Query: 669 LYGKL 673
L K+
Sbjct: 605 LRNKM 609
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 231/504 (45%), Gaps = 51/504 (10%)
Query: 27 SIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSAS 86
++ T ++ Y L A LF +MP RN SWN +I Y ++ + +A LFD
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP 167
Query: 87 HRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCY 146
R++VS+NSM+ A D A++LF RM D ++ T M++ AK V
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDE-AMNLFERMPRR------DVVSWTAMVDGLAKNGKVDE 220
Query: 147 GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACC 206
+++ M + + + +++I Y++ EA +F D S N M+
Sbjct: 221 ARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVMPE-RDFASWNTMITGFI 275
Query: 207 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG-IEYNQHTL 265
R+ +M+ A +F + PE N +SW T+I GYV+N E AL +F +M+ G ++ N T
Sbjct: 276 RNREMNKACGLFDRMPEKN-VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY 334
Query: 266 ASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGI 325
S+LSAC+ L L G+ +H L+ K+ N+ V+S +++ Y K G
Sbjct: 335 VSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG-------------- 380
Query: 326 KSPFATSSLIAGYSSKGNMTKAKRLFDS--LSERNYVVWTALCSGYVKSQQCEAVFKLFR 383
LIA A+++FD+ + +R+ + W ++ + Y + +++
Sbjct: 381 -------ELIA----------ARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYN 423
Query: 384 EFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK-LNMDEKLASALVDMYSK 442
+ R P + +N+L AC+ + G + ++R + L + E+ + LVD+ +
Sbjct: 424 QMR-KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGR 482
Query: 443 CGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 502
G + +F D+ Y +++ H + A ++ +++L+ DA T+V
Sbjct: 483 AGRLKDV-TNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG-SDDAGTYV 540
Query: 503 ALLSACRHRGLVELGEKFFMSMKE 526
+ + G E + M MKE
Sbjct: 541 LMSNIYAANGKREEAAEMRMKMKE 564
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 308 CKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL-SERNYVVWTALC 366
CK G + A ++ G+ + + +I GY G+M +A+ LFD + S +N V WTA+
Sbjct: 57 CKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMV 116
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMI-----------IVNVLGACAIQATLSLGK 415
SGY++S+Q LF+E + +TMI + + + +S
Sbjct: 117 SGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNS 176
Query: 416 QTHAYILRTK----LNMDEKLA-------SALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 464
A + R + +N+ E++ +A+VD +K G + A + F + +R++I
Sbjct: 177 MVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP--ERNII 234
Query: 465 LYNVMIAGYAHHGFENKAIQLFQEM 489
+N MI GYA + ++A QLFQ M
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVM 259
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 115/260 (44%), Gaps = 28/260 (10%)
Query: 318 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 377
S+Y+ LI G + +A++LFD L ER+ V WT + +GY+K
Sbjct: 36 SIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMRE 95
Query: 378 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA---S 434
+LF + + ++ T ++ L + + L ++ M E+ +
Sbjct: 96 ARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQE-----------MPERNVVSWN 144
Query: 435 ALVDMYSKCGNIAYAEKSFQLVTD-SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
++D Y++ G I +K+ +L + +R+++ +N M+ G ++A+ LF+ M
Sbjct: 145 TMIDGYAQSGRI---DKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM---- 197
Query: 494 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
+ D +++ A++ G V+ + F M E I + M+ Y + N++++A
Sbjct: 198 PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER-----NIISWNAMITGYAQNNRIDEA 252
Query: 554 VEFMRKIPIQIDATIWGAFL 573
+ + +P + D W +
Sbjct: 253 DQLFQVMP-ERDFASWNTMI 271
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 261/482 (54%), Gaps = 21/482 (4%)
Query: 211 MDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMER--ALTLFIEMI-EKGIEYNQHTLAS 267
+D A +F + P+ N SWNT+I G+ ++ + A+TLF EM+ ++ +E N+ T S
Sbjct: 75 LDYAHKIFNQMPQRN-CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
VL AC ++ GK +H L LK ++FV S +V Y CG M+ A ++ I+
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 328 PFATSS--------------LIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
+ +I GY G+ A+ LFD + +R+ V W + SGY +
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
+ ++FRE + + + P+ + +V+VL A + +L LG+ H Y + + +D+ L
Sbjct: 254 FFKDAVEVFREMKKGD-IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
SAL+DMYSKCG I A F+ + + VI ++ MI G+A HG AI F +M +
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPREN--VITWSAMINGFAIHGQAGDAIDCFCKMRQAG 370
Query: 494 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
++P + ++ LL+AC H GLVE G ++F M + P I HY CMVD+ GR L++A
Sbjct: 371 VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 554 VEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAE 613
EF+ +PI+ D IW A L AC++ N + K+ L+ + + YV L+N+YA++
Sbjct: 431 EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQ 490
Query: 614 GKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL 673
G W+E+ +R M+ K+ K PGCS I ++ +H F D SH KA I S LV + KL
Sbjct: 491 GNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKL 550
Query: 674 YL 675
L
Sbjct: 551 RL 552
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 218/513 (42%), Gaps = 91/513 (17%)
Query: 24 LASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFD 83
L I C + L IH + ++ ++ D + + A + + +L A +F+
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCAT--SDLHHRDLDYAHKIFN 83
Query: 84 SASHRDLVSYNSMLSAYAGADGCDT-VALDLFARMQSARDTIGMDEITLTTMLNLSAKLR 142
R+ S+N+++ ++ +D +A+ LF M S + + + T ++L AK
Sbjct: 84 QMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSD-EFVEPNRFTFPSVLKACAKTG 142
Query: 143 VVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC----DGVV----- 193
+ GKQ+H +K +F +S+L+ MY CG ++A +F D VV
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 194 ----DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 249
++V N M+ R G A +F K + VSWNT+I+GY NG+ + A+ +
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQ-RSVVSWNTMISGYSLNGFFKDAVEV 261
Query: 250 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-NQFVSSGIVDFYC 308
F EM + I N TL SVL A + L L+LG+ +H L ++ G + + S ++D Y
Sbjct: 262 FREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH-LYAEDSGIRIDDVLGSALIDMYS 320
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 368
KCG + KA +F+ L N + W+A+ +G
Sbjct: 321 KCGIIE-------------------------------KAIHVFERLPRENVITWSAMING 349
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 428
+ Q F + R + P + +N+L AC+ + G++ + ++ +
Sbjct: 350 FAIHGQAGDAIDCFCKMRQA-GVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVD-GL 407
Query: 429 DEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLF 486
+ ++ +VD+ + G + AE
Sbjct: 408 EPRIEHYGCMVDLLGRSGLLDEAE------------------------------------ 431
Query: 487 QEMLKISLKPDAITFVALLSACRHRGLVELGEK 519
+ +L + +KPD + + ALL ACR +G VE+G++
Sbjct: 432 EFILNMPIKPDDVIWKALLGACRMQGNVEMGKR 464
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 157/355 (44%), Gaps = 52/355 (14%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDK---------MPHRNAFS----- 61
H A+K G F + L+ +Y + G +++A LF K M R
Sbjct: 151 HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 62 WNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSAR 121
WN +I Y++ + AR LFD R +VS+N+M+S Y+ +G A+++F M+
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYS-LNGFFKDAVEVFREMKKG- 268
Query: 122 DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFRE 181
I + +TL ++L ++L + G+ +H Y + + S+LIDMYSKCG
Sbjct: 269 -DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG---- 323
Query: 182 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 241
++ K A++VF + P N ++W+ +I G+ +G
Sbjct: 324 -------------IIEK---------------AIHVFERLPREN-VITWSAMINGFAIHG 354
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 301
A+ F +M + G+ + ++L+AC+ ++ G+ + ++ DG +
Sbjct: 355 QAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHY 414
Query: 302 G-IVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSL 354
G +VD + G + AE + IK +L+ +GN+ KR+ + L
Sbjct: 415 GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANIL 469
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 307/617 (49%), Gaps = 77/617 (12%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N ++ Y K ++ AR +F + +D VS+NSM++ +GC A++ + M+ R
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGL-DQNGCFIEAVERYKSMR--RH 409
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
I TL + L+ A L+ G+Q+H +K DL+ ++L+ +Y++ G E
Sbjct: 410 DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
+FS PE +D VSWN++I ++
Sbjct: 470 RKIFSSM--------------------------------PE-HDQVSWNSIIGALARSER 496
Query: 243 -MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 301
+ A+ F+ G + N+ T +SVLSA + L +LGK +H L LKN+ +
Sbjct: 497 SLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTEN 556
Query: 302 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER-NYV 360
++ Y KCG M E ++F ++ER + V
Sbjct: 557 ALIACYGKCGEMDGCE-------------------------------KIFSRMAERRDNV 585
Query: 361 VWTALCSGYVKSQQCEAVFKL-FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 419
W ++ SGY+ ++ L + +T + L D+ + VL A A ATL G + HA
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMLQTGQRL--DSFMYATVLSAFASVATLERGMEVHA 643
Query: 420 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 479
+R L D + SALVDMYSKCG + YA + F T R+ +N MI+GYA HG
Sbjct: 644 CSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN--TMPVRNSYSWNSMISGYARHGQG 701
Query: 480 NKAIQLFQEM-LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYA 538
+A++LF+ M L PD +TFV +LSAC H GL+E G K F SM + Y + P I H++
Sbjct: 702 EEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFS 761
Query: 539 CMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNN--TTLVKQAEEELLKVE 596
CM D+ GR +L+K +F+ K+P++ + IW L AC N L K+A E L ++E
Sbjct: 762 CMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLE 821
Query: 597 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSH 656
+N YV L N+YAA G+W ++ + RK+M+ + K G SW+ +++G+H+F +GD SH
Sbjct: 822 PENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSH 881
Query: 657 SKADAIYSTLVCLYGKL 673
AD IY L L K+
Sbjct: 882 PDADVIYKKLKELNRKM 898
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/510 (24%), Positives = 214/510 (41%), Gaps = 103/510 (20%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H + K+ L ++ CN LI+ Y G A K+FD+MP RN SW I+ Y +
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+A RD+V + YA F + A IG I
Sbjct: 84 KEALVFL-----RDMVKEGIFSNQYA------------FVSVLRACQEIGSVGIL----- 121
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+G+Q+H M K + + + LI MY KC
Sbjct: 122 ----------FGRQIHGLMFKLSYAVDAVVSNVLISMYWKC------------------- 152
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
G + AL F + E ++VSWN++I+ Y Q G A +F M
Sbjct: 153 ------------IGSVGYALCAF-GDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 256 KGIEYNQHTLAS-VLSACTGLKC-LKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
G ++T S V +AC+ + ++L + + + K+ ++ FV SG+V + K G++
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
Y A+++F+ + RN V L G V+ +
Sbjct: 260 SY-------------------------------ARKVFNQMETRNAVTLNGLMVGLVRQK 288
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIV---NVLGACAIQATLSLGKQTHAYILRTKL-NMD 429
E KLF + + + P++ +I+ + A + L G++ H +++ T L +
Sbjct: 289 WGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFM 348
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 489
+ + LV+MY+KCG+IA A + F +T D+D + +N MI G +G +A++ ++ M
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMT--DKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 490 LKISLKPDAITFVALLSACRHRGLVELGEK 519
+ + P + T ++ LS+C +LG++
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQ 436
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 121/250 (48%), Gaps = 9/250 (3%)
Query: 326 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 385
K + ++LI Y G+ A+++FD + RN V W + SGY ++ + + R+
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 386 RTTEALIPDTMIIVNVLGACAIQATLSL--GKQTHAYILRTKLNMDEKLASALVDMYSKC 443
E + + V+VL AC ++ + G+Q H + + +D +++ L+ MY KC
Sbjct: 94 -VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 444 -GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 502
G++ YA +F + ++ + +N +I+ Y+ G + A ++F M +P TF
Sbjct: 153 IGSVGYALCAFGDI--EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFG 210
Query: 503 ALL-SACR-HRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
+L+ +AC V L E+ ++++ +L +++ + +V + + L A + ++
Sbjct: 211 SLVTTACSLTEPDVRLLEQIMCTIQKS-GLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Query: 561 PIQIDATIWG 570
+ T+ G
Sbjct: 270 ETRNAVTLNG 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 110/268 (41%), Gaps = 69/268 (25%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP-HRNAFSWNAIIMAYIKAHN 74
H A+K+ +A T N LI Y G + K+F +M R+ +WN++I YI HN
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI--HN 597
Query: 75 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
A+AL DLV + +Q+ + +D T+
Sbjct: 598 ELLAKAL-------DLVWF----------------------MLQTGQR---LDSFMYATV 625
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
L+ A + + G ++H+ V+ + S+L+DMYSKC
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKC------------------ 667
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
G++D AL F P N + SWN++I+GY ++G E AL LF M
Sbjct: 668 --------------GRLDYALRFFNTMPVRN-SYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 255 EKGIEYNQH-TLASVLSACTGLKCLKLG 281
G H T VLSAC+ L+ G
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEG 740
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 184/651 (28%), Positives = 298/651 (45%), Gaps = 101/651 (15%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H A+K+ L SS++ + L+ +Y G + ++ ++F +MP RNA +W AII + A
Sbjct: 131 HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+ F S + +S D T L
Sbjct: 191 KEGLTYFSEMSRSEELS----------------------------------DTYTFAIAL 216
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
A LR V YGK +H++++ + +SL MY++CG ++ +F
Sbjct: 217 KACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLF--------- 267
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+N D VSW +LI Y + G +A+ FI+M
Sbjct: 268 ------------------------ENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRN 303
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+ N+ T AS+ SAC L L G+ +H VL S G+ D
Sbjct: 304 SQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL----------SLGLND---------- 343
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
S ++S++ YS+ GN+ A LF + R+ + W+ + GY ++
Sbjct: 344 -----------SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFG 392
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
E FK F R + P + ++L A + G+Q HA L L + + S+
Sbjct: 393 EEGFKYFSWMRQS-GTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSS 451
Query: 436 LVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
L++MYSKCG+I A F TD D D++ MI GYA HG +AI LF++ LK+ +
Sbjct: 452 LINMYSKCGSIKEASMIFG-ETDRD-DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFR 509
Query: 496 PDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVE 555
PD++TF+++L+AC H G ++LG +F M+E YN+ P HY CMVD+ R +L A +
Sbjct: 510 PDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEK 569
Query: 556 FMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGK 615
+ ++ + D +W L ACK + ++A E +L+++ + V LAN+Y++ G
Sbjct: 570 MINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGN 629
Query: 616 WNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
E +RK M+ K K PG S I +++ + F SGD H +++ IY+ L
Sbjct: 630 LEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 204/460 (44%), Gaps = 68/460 (14%)
Query: 60 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 119
F N+ + + I A NL AR +FD H D+VS+ S++ Y A+ D AL LF+ M+
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDE-ALILFSAMRV 99
Query: 120 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 179
+ D L+ +L + + YG+ +H+Y VKT+ S + SSL+DMY
Sbjct: 100 VDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYK----- 154
Query: 180 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 239
R GK+D + VF + P F + V+W +I G V
Sbjct: 155 ---------------------------RVGKIDKSCRVFSEMP-FRNAVTWTAIITGLVH 186
Query: 240 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 299
G + LT F EM + +T A L AC GL+ +K GK +H V+ + V
Sbjct: 187 AGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCV 246
Query: 300 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 359
++ + Y +CG M+ ++ +++SER+
Sbjct: 247 ANSLATMYTECGEMQDGLCLF-------------------------------ENMSERDV 275
Query: 360 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 419
V WT+L Y + Q + F + R ++ + P+ ++ ACA + L G+Q H
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQ-VPPNEQTFASMFSACASLSRLVWGEQLHC 334
Query: 420 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 479
+L LN ++++++ MYS CGN+ A FQ + RD+I ++ +I GY GF
Sbjct: 335 NVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGM--RCRDIISWSTIIGGYCQAGFG 392
Query: 480 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 519
+ + F M + KP +LLS + ++E G +
Sbjct: 393 EEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ 432
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 137/314 (43%), Gaps = 37/314 (11%)
Query: 209 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM--IEKGIEYNQHTLA 266
G + A VF K P D VSW ++I YV + AL LF M ++ + + L+
Sbjct: 54 GNLRAARQVFDKMPH-GDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 267 SVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 326
VL AC + G+ +HA +K S SVY G
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLS----------------------SVYVG---- 146
Query: 327 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 386
SSL+ Y G + K+ R+F + RN V WTA+ +G V + + + F E
Sbjct: 147 -----SSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMS 201
Query: 387 TTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI 446
+E L DT L ACA + GK H +++ +A++L MY++CG +
Sbjct: 202 RSEEL-SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEM 260
Query: 447 AYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLS 506
F+ + S+RDV+ + +I Y G E KA++ F +M + P+ TF ++ S
Sbjct: 261 QDGLCLFENM--SERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFS 318
Query: 507 ACRHRGLVELGEKF 520
AC + GE+
Sbjct: 319 ACASLSRLVWGEQL 332
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 188/626 (30%), Positives = 319/626 (50%), Gaps = 38/626 (6%)
Query: 32 NQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLV 91
NQ+I G + EA +F+K+ RN +WN +I Y+K + QAR LFD RD+V
Sbjct: 48 NQMIR----SGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 92 SYNSMLSAYAGADGCDTV--ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQ 149
++N+M+S Y G + A LF M S D + TM++ AK R + G+
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSR------DSFSWNTMISGYAKNRRI--GEA 155
Query: 150 MHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDG 209
+ + + + + + S++I + + G A +F V D A+VA ++
Sbjct: 156 L--LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP-VKDSSPLCALVAGLIKNE 212
Query: 210 KMDMALNVFWKNPEFNDTVS--------WNTLIAGYVQNGYMERALTLFIEMIE-----K 256
++ A W ++ VS +NTLI GY Q G +E A LF ++ +
Sbjct: 213 RLSEAA---WVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDH 269
Query: 257 GIEYNQHTLASVLSACTGLKC-LKLGKCVHALVLKNDGCSNQFVS-SGIVDFYCKCGNMR 314
G E+ + +V+S + +K LK+G V A +L + +S + ++D Y M
Sbjct: 270 GGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRME 329
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 374
A ++++ + + + + +++GY+S GN+ A+ F+ E++ V W ++ + Y K++
Sbjct: 330 DAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKD 389
Query: 375 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 434
+ LF E PD + ++L A L LG Q H +++T + D + +
Sbjct: 390 YKEAVDLFIRM-NIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHN 447
Query: 435 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 494
AL+ MYS+CG I + + F + R+VI +N MI GYA HG ++A+ LF M +
Sbjct: 448 ALITMYSRCGEIMESRRIFDEMK-LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Query: 495 KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 554
P ITFV++L+AC H GLV+ + F+SM Y + P++ HY+ +V++ Q E+A+
Sbjct: 507 YPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAM 566
Query: 555 EFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEG 614
+ +P + D T+WGA L+AC+I NN L A E + ++E ++ + YV L N+YA G
Sbjct: 567 YIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMG 626
Query: 615 KWNEMGRIRKEMRGKEATKLPGCSWI 640
W+E ++R M K K G SW+
Sbjct: 627 LWDEASQVRMNMESKRIKKERGSSWV 652
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 135/611 (22%), Positives = 226/611 (36%), Gaps = 145/611 (23%)
Query: 25 ASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHN---LTQARAL 81
A + T N +I Y + +A KLFD MP R+ +WN +I Y+ L +AR L
Sbjct: 68 ARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKL 127
Query: 82 FDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKL 141
FD RD S+N+M+S YA AL LF +M R+ + + N
Sbjct: 128 FDEMPSRDSFSWNTMISGYAKNRRIGE-ALLLFEKMPE-RNAVSWSAMITGFCQNGEVDS 185
Query: 142 RVVCYGKQ-----------------------------MHSYMVKTANDLSKFALSSLIDM 172
VV + K + +V DL +A ++LI
Sbjct: 186 AVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLV-YAYNTLIVG 244
Query: 173 YSKCGSFREAYNVFSGCDGVVDL-----------------VSKNAMVAACCRDGKMDMAL 215
Y + G A +F D + DL VS N+M+ A + G + ++
Sbjct: 245 YGQRGQVEAARCLF---DQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDV-VSA 300
Query: 216 NVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL 275
+ + + DT+SWNT+I GYV ME A LF EM + + H+ ++S +
Sbjct: 301 RLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASV 356
Query: 276 KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS----PFAT 331
++L + + S + I+ Y K + + A ++ + I+ P
Sbjct: 357 GNVELARHYFEKTPEKHTVS----WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 332 SSLIAG----------------------------------YSSKGNMTKAKRLFDSLS-E 356
+SL++ YS G + +++R+FD + +
Sbjct: 413 TSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLK 472
Query: 357 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 416
R + W A+ GY LF ++ + P + V+VL ACA + K
Sbjct: 473 REVITWNAMIGGYAFHGNASEALNLFGSMKSN-GIYPSHITFVSVLNACAHAGLVDEAKA 531
Query: 417 THAYILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 475
++ K+ + S+LV++ S G E++ ++T
Sbjct: 532 QFVSMMSVYKIEPQMEHYSSLVNVTSGQGQF---EEAMYIIT------------------ 570
Query: 476 HGFENKAIQLFQEMLKISLKPDAITFVALLSACR---HRGLVELGEKFFMSMKEDYNVLP 532
+ +PD + ALL ACR + GL + + MS E + P
Sbjct: 571 ---------------SMPFEPDKTVWGALLDACRIYNNVGLAHVAAE-AMSRLEPESSTP 614
Query: 533 EIYHYACMVDM 543
+ Y DM
Sbjct: 615 YVLLYNMYADM 625
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 114/289 (39%), Gaps = 67/289 (23%)
Query: 15 DHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHN 74
DH + ++ + N +I Y G + A LFD+M R+ SWN +I Y+
Sbjct: 268 DHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSR 327
Query: 75 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTV------------------------- 109
+ A ALF +RD S+N M+S YA +
Sbjct: 328 MEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKN 387
Query: 110 -----ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTA-NDLSK 163
A+DLF RM + D TLT++L+ S L + G QMH +VKT D+
Sbjct: 388 KDYKEAVDLFIRMNIEGEKP--DPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP- 444
Query: 164 FALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE 223
++LI MYS+CG E+ +F ++++ NAM
Sbjct: 445 -VHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAM---------------------- 481
Query: 224 FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 272
I GY +G AL LF M GI + T SVL+AC
Sbjct: 482 ----------IGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNAC 520
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 178/580 (30%), Positives = 287/580 (49%), Gaps = 78/580 (13%)
Query: 64 AIIMAYIKAHNLTQARALF---DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSA 120
A+I Y K+ ++ + +F D +++V N M+++++ + A+ LF RM
Sbjct: 391 ALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGK-AIRLFTRM--L 445
Query: 121 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 180
++ + DE ++ ++L++ L + GKQ+H Y +K+ L SSL +YSKCGS
Sbjct: 446 QEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLE 502
Query: 181 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 240
E+Y +F G F D W ++I+G+ +
Sbjct: 503 ESYKLFQGI---------------------------------PFKDNACWASMISGFNEY 529
Query: 241 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 300
GY+ A+ LF EM++ G ++ TLA+VL+ C+ L GK +H L+ +
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 301 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 360
S +V+ Y KCG+++ A ++++D L E + V
Sbjct: 590 SALVNMYSKCGSLKLA-------------------------------RQVYDRLPELDPV 618
Query: 361 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 420
++L SGY + + F LFR+ D+ I ++L A A+ SLG Q HAY
Sbjct: 619 SCSSLISGYSQHGLIQDGFLLFRDM-VMSGFTMDSFAISSILKAAALSDESSLGAQVHAY 677
Query: 421 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 480
I + L + + S+L+ MYSK G+I K+F + D +I + +IA YA HG N
Sbjct: 678 ITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPD--LIAWTALIASYAQHGKAN 735
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 540
+A+Q++ M + KPD +TFV +LSAC H GLVE SM +DY + PE HY CM
Sbjct: 736 EALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCM 795
Query: 541 VDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 600
VD GR +L +A F+ + I+ DA +WG L ACKI+ L K A ++ +++E +
Sbjct: 796 VDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDA 855
Query: 601 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 640
Y+ L+N+ A G+W+E+ RK M+G K PG S +
Sbjct: 856 GAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 147/559 (26%), Positives = 238/559 (42%), Gaps = 120/559 (21%)
Query: 24 LASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFD 83
L +F L+ YS G + +A KLFD +P + S N +I Y K H L + F
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGY-KQHRLFEESLRFF 138
Query: 84 SASH-----RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLS 138
S H + +SY S++SA C + LF+ +
Sbjct: 139 SKMHFLGFEANEISYGSVISA------CSALQAPLFSEL--------------------- 171
Query: 139 AKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSK 198
V C+ +M + + S+LID++SK F +AY VF
Sbjct: 172 ----VCCHTIKMGYFFYEVVE-------SALIDVFSKNLRFEDAYKVF------------ 208
Query: 199 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 258
RD ++ NV+ WNT+IAG ++N LF EM
Sbjct: 209 --------RD---SLSANVY----------CWNTIIAGALRNQNYGAVFDLFHEMCVGFQ 247
Query: 259 EYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAES 318
+ + +T +SVL+AC L+ L+ GK V A V+K G + FV + IVD Y KCG+
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKC-GAEDVFVCTAIVDLYAKCGH------ 300
Query: 319 VYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAV 378
M +A +F + + V WT + SGY KS +
Sbjct: 301 -------------------------MAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSA 335
Query: 379 FKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVD 438
++F+E R + I + + +V+ AC + + Q HA++ ++ +D +A+AL+
Sbjct: 336 LEIFKEMRHSGVEI-NNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALIS 394
Query: 439 MYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDA 498
MYSK G+I +E+ F+ + D R I+ NVMI ++ KAI+LF ML+ L+ D
Sbjct: 395 MYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDE 453
Query: 499 ITFVALLSA--CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 556
+ +LLS C + G G + D V ++ +Y + LE++ +
Sbjct: 454 FSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLF------TLYSKCGSLEESYKL 507
Query: 557 MRKIPIQIDATIWGAFLNA 575
+ IP + D W + ++
Sbjct: 508 FQGIPFK-DNACWASMISG 525
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/531 (24%), Positives = 221/531 (41%), Gaps = 111/531 (20%)
Query: 34 LIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSY 93
LI ++S + ++A+K+F N + WN II ++ N LF H V +
Sbjct: 191 LIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF----HEMCVGF 246
Query: 94 NSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSY 153
D T +++L A L + +GK + +
Sbjct: 247 QK------------------------------PDSYTYSSVLAACASLEKLRFGKVVQAR 276
Query: 154 MVKT-ANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMD 212
++K A D+ F ++++D+Y+KCG EA VFS
Sbjct: 277 VIKCGAEDV--FVCTAIVDLYAKCGHMAEAMEVFSRI----------------------- 311
Query: 213 MALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 272
NP VSW +++GY ++ AL +F EM G+E N T+ SV+SAC
Sbjct: 312 -------PNPS---VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 273 TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI-GIKSPFAT 331
+ VHA V K+ + V++ ++ Y K G++ +E V+ + I+
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV 421
Query: 332 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 391
+ +I +S KA RLF + + E L
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQ--------------------------------EGL 449
Query: 392 IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 451
D + ++L ++ L+LGKQ H Y L++ L +D + S+L +YSKCG++ + K
Sbjct: 450 RTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYK 506
Query: 452 SFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC-RH 510
FQ + +D + MI+G+ +G+ +AI LF EML PD T A+L+ C H
Sbjct: 507 LFQGIP--FKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSH 564
Query: 511 RGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP 561
L E +++ + ++ + +V+MY + L+ A + ++P
Sbjct: 565 PSLPRGKEIHGYTLRAGIDKGMDL--GSALVNMYSKCGSLKLARQVYDRLP 613
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 278 bits (712), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 281/534 (52%), Gaps = 69/534 (12%)
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
+L L A+ V K H +++ + L+ LI+ YSKCG A VF
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF------- 119
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
DG ++ +L VSWNT+I Y +N AL +F+EM
Sbjct: 120 --------------DGMLERSL------------VSWNTMIGLYTRNRMESEALDIFLEM 153
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLG-KCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
+G ++++ T++SVLSAC G+ C L K +H L +K N +V + ++D Y KCG
Sbjct: 154 RNEGFKFSEFTISSVLSAC-GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
++ A ++F+S+ +++ V W+++ +GYV++
Sbjct: 213 IK-------------------------------DAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
+ E L+R + +L + + +V+ AC+ A L GKQ HA I ++ + +
Sbjct: 242 KNYEEALLLYRRAQRM-SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFV 300
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
AS+ VDMY+KCG++ + F V ++++ L+N +I+G+A H + + LF++M +
Sbjct: 301 ASSAVDMYAKCGSLRESYIIFSEV--QEKNLELWNTIISGFAKHARPKEVMILFEKMQQD 358
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
+ P+ +TF +LLS C H GLVE G +FF M+ Y + P + HY+CMVD+ GR L +
Sbjct: 359 GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 418
Query: 553 AVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 612
A E ++ IP A+IWG+ L +C++ N L + A E+L ++E +N +V L+N+YAA
Sbjct: 419 AYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA 478
Query: 613 EGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
+W E+ + RK +R + K+ G SWI +++ +H F+ G++ H + I STL
Sbjct: 479 NKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTL 532
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 201/421 (47%), Gaps = 54/421 (12%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N +I AY K + AR +FD R LVS+N+M+ Y + ++ ALD+F M++ +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT-RNRMESEALDIFLEMRN--E 156
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
E T++++L+ K++H VKT DL+ + ++L+D+Y+KCG ++A
Sbjct: 157 GFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDA 216
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
VF ++ + +V+W++++AGYVQN
Sbjct: 217 VQVF---------------------------------ESMQDKSSVTWSSMVAGYVQNKN 243
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
E AL L+ +E NQ TL+SV+ AC+ L L GK +HA++ K+ SN FV+S
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE----RN 358
VD Y KCG++R + +++ + K+ +++I+G++ + LF+ + + N
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 363
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
V +++L S + E + F+ RTT L P+ V +C + G +
Sbjct: 364 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV-----VHYSCMVDILGRAGLLSE 418
Query: 419 AYILRTKLNMDEK-------LASALVDMYSKCGNIAYAEKSFQLVTD-SDRDVILYNVMI 470
AY L + D LAS V + +A AEK F+L + + V+L N+
Sbjct: 419 AYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA-AEKLFELEPENAGNHVLLSNIYA 477
Query: 471 A 471
A
Sbjct: 478 A 478
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 397 IIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLV 456
++ +L CA + K H I+R L D L + L++ YSKCG + A + F +
Sbjct: 63 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 122
Query: 457 TDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 508
+R ++ +N MI Y + E++A+ +F EM K T ++LSAC
Sbjct: 123 L--ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 164/526 (31%), Positives = 259/526 (49%), Gaps = 71/526 (13%)
Query: 149 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRD 208
++H +++ +D F + LI MYS GS A VF D K +
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVF-------DKTRKRTIYV----- 145
Query: 209 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 268
WN L G+ E L L+ +M G+E ++ T V
Sbjct: 146 ---------------------WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYV 184
Query: 269 LSACTGLKC----LKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIG 324
L AC +C L GK +HA + + S+ ++ + +VD Y + G + YA V+ G+
Sbjct: 185 LKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244
Query: 325 IKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE 384
+ RN V W+A+ + Y K+ + + FRE
Sbjct: 245 V-------------------------------RNVVSWSAMIACYAKNGKAFEALRTFRE 273
Query: 385 F-RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 443
R T+ P+++ +V+VL ACA A L GK H YILR L+ + SALV MY +C
Sbjct: 274 MMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRC 333
Query: 444 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 503
G + ++ F + DRDV+ +N +I+ Y HG+ KAIQ+F+EML P +TFV+
Sbjct: 334 GKLEVGQRVFDRM--HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 504 LLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQ 563
+L AC H GLVE G++ F +M D+ + P+I HYACMVD+ GR N+L++A + ++ + +
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 564 IDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIR 623
+WG+ L +C+I+ N L ++A L +E N YV LA++YA W+E+ R++
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511
Query: 624 KEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCL 669
K + + KLPG W+ V ++ F S D + + I++ LV L
Sbjct: 512 KLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKL 557
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 138/607 (22%), Positives = 232/607 (38%), Gaps = 157/607 (25%)
Query: 8 DALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIM 67
DAL V+R H+ + +G F +LI +YS G + A K+FDK R + WNA+
Sbjct: 95 DALRVHR-HI--LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFR 151
Query: 68 AYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMD 127
A LT A G L L+ +M + IG++
Sbjct: 152 A------LTLA--------------------------GHGEEVLGLYWKM----NRIGVE 175
Query: 128 EITLTTMLNLSAKLRVVCY------GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFRE 181
T L A + C GK++H+++ + + +++L+DMY++ G
Sbjct: 176 SDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDY 235
Query: 182 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 241
A VF G V ++VS +AM+A Y +NG
Sbjct: 236 ASYVFGGMP-VRNVVSWSAMIAC--------------------------------YAKNG 262
Query: 242 YMERALTLFIEMIE--KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 299
AL F EM+ K N T+ SVL AC L L+ GK +H +L+ S V
Sbjct: 263 KAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPV 322
Query: 300 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 359
S +V Y +CG + + R+FD + +R+
Sbjct: 323 ISALVTMYGRCGKLEVGQ-------------------------------RVFDRMHDRDV 351
Query: 360 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 419
V W +L S Y + ++F E A P + V+VLGAC+ + + GK+
Sbjct: 352 VSWNSLISSYGVHGYGKKAIQIFEEMLANGA-SPTPVTFVSVLGACSHEGLVEEGKRLFE 410
Query: 420 YILRTK-LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 478
+ R + + + +VD+ + +
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGRANRL-------------------------------- 438
Query: 479 ENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK-----FFMSMKE--DYNVL 531
++A ++ Q+M +P + +LL +CR G VEL E+ F + K +Y +L
Sbjct: 439 -DEAAKMVQDM---RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLL 494
Query: 532 PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEE 591
+IY A M D R +L + ++K+P + + + ++ L++Q
Sbjct: 495 ADIYAEAQMWDEVKRVKKLLEH-RGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAF 553
Query: 592 LLKVEAD 598
L+K+ D
Sbjct: 554 LVKLAED 560
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 167/426 (39%), Gaps = 76/426 (17%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H + G +S ++ L+ +Y+ G + A +F MP RN SW+A
Sbjct: 205 HAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSA----------- 253
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
M++ YA +G AL F M + +T+ ++L
Sbjct: 254 --------------------MIACYA-KNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
A L + GK +H Y+++ D +S+L+ MY +CG VF D + D
Sbjct: 293 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVF---DRMHD- 348
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
D VSWN+LI+ Y +GY ++A+ +F EM+
Sbjct: 349 -----------------------------RDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS-SGIVDFYCKCGNMR 314
G T SVL AC+ ++ GK + + ++ G Q + +VD + +
Sbjct: 380 NGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLD 439
Query: 315 YAESVYAGIGIKS-PFATSSLIAGYSSKGNMTKA----KRLFDSLSERNYVVWTALCSGY 369
A + + + P SL+ GN+ A +RLF +L +N + L Y
Sbjct: 440 EAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLF-ALEPKNAGNYVLLADIY 498
Query: 370 VKSQQCEAV--FKLFREFRTTEALIPDTMIIVN--VLGACAIQATLSLGKQTHAYILRTK 425
++Q + V K E R + L + V + ++ L +Q HA++++
Sbjct: 499 AEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLA 558
Query: 426 LNMDEK 431
+M EK
Sbjct: 559 EDMKEK 564
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 12/214 (5%)
Query: 405 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 464
C +++LS + H +IL + D LA+ L+ MYS G++ YA K F R +
Sbjct: 87 CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFD--KTRKRTIY 144
Query: 465 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 524
++N + G + + L+ +M +I ++ D T+ +L AC E M
Sbjct: 145 VWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV---ASECTVNHLMKG 201
Query: 525 KEDYNVLPE------IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKI 578
KE + L +Y +VDMY R ++ A +P++ + W A +
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIACYAK 260
Query: 579 NNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 612
N + E+++ D+ V + +V A
Sbjct: 261 NGKAFEALRTFREMMRETKDSSPNSVTMVSVLQA 294
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/609 (29%), Positives = 292/609 (47%), Gaps = 70/609 (11%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
NAF A+I AY ++ AR +F+ +D+V + ++S Y +G +L L + M
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV-ENGYFEDSLKLLSCM 238
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
+ A + T T L S L + K +H ++KT L L+ +Y++ G
Sbjct: 239 RMA--GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLG 296
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
+A+ VF N M P+ ND V W+ +IA +
Sbjct: 297 DMSDAFKVF------------NEM--------------------PK-NDVVPWSFMIARF 323
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 297
QNG+ A+ LFI M E + N+ TL+S+L+ C KC LG+ +H LV+K +
Sbjct: 324 CQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI 383
Query: 298 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 357
+VS+ ++D Y KC M A +LF LS +
Sbjct: 384 YVSNALIDVYAKCEKM-------------------------------DTAVKLFAELSSK 412
Query: 358 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 417
N V W + GY + F +FRE + + + + + LGACA A++ LG Q
Sbjct: 413 NEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTE-VTFSSALGACASLASMDLGVQV 471
Query: 418 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 477
H ++T ++++L+DMY+KCG+I +A+ F + D V +N +I+GY+ HG
Sbjct: 472 HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETID--VASWNALISGYSTHG 529
Query: 478 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 537
+A+++ M KP+ +TF+ +LS C + GL++ G++ F SM D+ + P + HY
Sbjct: 530 LGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHY 589
Query: 538 ACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEA 597
CMV + GR QL+KA++ + IP + IW A L+A NN +++ EE+LK+
Sbjct: 590 TCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINP 649
Query: 598 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 657
+ + YV ++N+YA +W + IRK M+ K PG SWI + +H F+ G + H
Sbjct: 650 KDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHP 709
Query: 658 KADAIYSTL 666
I L
Sbjct: 710 DMKLINGML 718
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 168/369 (45%), Gaps = 42/369 (11%)
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
+DL + N ++ A + G ALN+F + PE N+ VS+ TL GY + + L+
Sbjct: 82 LDLFATNILLNAYVKAGFDKDALNLFDEMPERNN-VSFVTLAQGYA----CQDPIGLYSR 136
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
+ +G E N H S L L ++ +H+ ++K SN FV + +++ Y CG+
Sbjct: 137 LHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
+ A +V+ GI K + VVW + S YV++
Sbjct: 197 VDSARTVFEGILCK-------------------------------DIVVWAGIVSCYVEN 225
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
E KL R +P+ L A K H IL+T +D ++
Sbjct: 226 GYFEDSLKLLSCMRMA-GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV 284
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
L+ +Y++ G+++ A K F + + DV+ ++ MIA + +GF N+A+ LF M +
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKN--DVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLE 551
+ P+ T ++L+ C LGE+ + +K +++ +IY ++D+Y + +++
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL--DIYVSNALIDVYAKCEKMD 400
Query: 552 KAVEFMRKI 560
AV+ ++
Sbjct: 401 TAVKLFAEL 409
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 131/299 (43%), Gaps = 48/299 (16%)
Query: 42 GLLQEAHKLFDKMPHR-NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAY 100
GL ++ H L K+ + + NA+I Y K + A LF S ++ VS+N+++ Y
Sbjct: 365 GLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY 424
Query: 101 AGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAND 160
G A +F ++ R+ + + E+T ++ L A L + G Q+H +KT N+
Sbjct: 425 ENL-GEGGKAFSMFR--EALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKT-NN 480
Query: 161 LSKFALS-SLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFW 219
K A+S SLIDMY+KCG + A +VF N M
Sbjct: 481 AKKVAVSNSLIDMYAKCGDIKFAQSVF------------NEM------------------ 510
Query: 220 KNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK 279
E D SWN LI+GY +G +AL + M ++ + N T VLS C+ +
Sbjct: 511 ---ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLID 567
Query: 280 LGKCVHALVLKNDG---CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLI 335
G+ ++++ G C + +V + G + A + GI P+ S +I
Sbjct: 568 QGQECFESMIRDHGIEPCLEHYTC--MVRLLGRSGQLDKAMKLIEGI----PYEPSVMI 620
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 253/458 (55%), Gaps = 9/458 (1%)
Query: 201 MVAACCRDGKMDMALNVFWK--NPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 258
MV C + MD A +F + NP + +N++I Y N + ++ +++ K
Sbjct: 48 MVDFCDKIEDMDYATRLFNQVSNP---NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSF 104
Query: 259 EY-NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 317
E ++ T + +C L LGK VH + K + + ++D Y K ++ A
Sbjct: 105 ELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAH 164
Query: 318 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 377
V+ + + + +SL++GY+ G M KAK LF + ++ V WTA+ SGY
Sbjct: 165 KVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVE 224
Query: 378 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 437
FRE + + PD + +++VL +CA +L LGK H Y R + +AL+
Sbjct: 225 AMDFFREMQLA-GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALI 283
Query: 438 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 497
+MYSKCG I+ A + F + +DVI ++ MI+GYA+HG + AI+ F EM + +KP+
Sbjct: 284 EMYSKCGVISQAIQLFGQM--EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPN 341
Query: 498 AITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFM 557
ITF+ LLSAC H G+ + G ++F M++DY + P+I HY C++D+ R +LE+AVE
Sbjct: 342 GITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEIT 401
Query: 558 RKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWN 617
+ +P++ D+ IWG+ L++C+ N + A + L+++E ++ YV LAN+YA GKW
Sbjct: 402 KTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWE 461
Query: 618 EMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTS 655
++ R+RK +R + K PG S I V N + F SGD S
Sbjct: 462 DVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 164/376 (43%), Gaps = 44/376 (11%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H K G + T N LI +Y L +AHK+FD+M R+ SWN+++ Y + +
Sbjct: 132 HGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQM 191
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+A+ LF + +VS+ +M+S Y G GC A+D F MQ A I DEI+L ++L
Sbjct: 192 KKAKGLFHLMLDKTIVSWTAMISGYTGI-GCYVEAMDFFREMQLA--GIEPDEISLISVL 248
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
A+L + GK +H Y + ++LI+MYSKCG +A +F +G
Sbjct: 249 PSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEG---- 304
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
D +SW+T+I+GY +G A+ F EM
Sbjct: 305 -----------------------------KDVISWSTMISGYAYHGNAHGAIETFNEMQR 335
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYCKCGNMR 314
++ N T +LSAC+ + + G ++ ++ + G ++D + G +
Sbjct: 336 AKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLE 395
Query: 315 YAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSE------RNYVVWTALCS 367
A + + +K SL++ + GN+ A D L E NYV+ + +
Sbjct: 396 RAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYA 455
Query: 368 GYVKSQQCEAVFKLFR 383
K + + K+ R
Sbjct: 456 DLGKWEDVSRLRKMIR 471
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 171/390 (43%), Gaps = 25/390 (6%)
Query: 71 KAHNLTQARALFDSASHRDLVSYNSMLSAYA-GADGCDTVALDLFARMQSARDTIGM-DE 128
K ++ A LF+ S+ ++ YNS++ AY + CD + + Q R + + D
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRI----YKQLLRKSFELPDR 109
Query: 129 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG 188
T M A L GKQ+H ++ K ++LIDMY K +A+ VF
Sbjct: 110 FTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDE 169
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 248
D++S N++++ R G+M A +F + VSW +I+GY G A+
Sbjct: 170 MYE-RDVISWNSLLSGYARLGQMKKAKGLFHLMLD-KTIVSWTAMISGYTGIGCYVEAMD 227
Query: 249 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 308
F EM GIE ++ +L SVL +C L L+LGK +H + V + +++ Y
Sbjct: 228 FFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYS 287
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTA 364
KCG + A ++ + K + S++I+GY+ GN A F+ + + N + +
Sbjct: 288 KCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLG 347
Query: 365 L---CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
L CS Q+ F + R+ E I +++VL GK A
Sbjct: 348 LLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARA--------GKLERAVE 399
Query: 422 LRTKLNM--DEKLASALVDMYSKCGNIAYA 449
+ + M D K+ +L+ GN+ A
Sbjct: 400 ITKTMPMKPDSKIWGSLLSSCRTPGNLDVA 429
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 139/334 (41%), Gaps = 36/334 (10%)
Query: 326 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 385
+S F + ++ +M A RLF+ +S N ++ ++ Y + V +++++
Sbjct: 40 QSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQL 99
Query: 386 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 445
+PD + +CA + LGKQ H ++ + +AL+DMY K +
Sbjct: 100 LRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDD 159
Query: 446 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK------------------------ 481
+ A K F + +RDVI +N +++GYA G K
Sbjct: 160 LVDAHKVFDEMY--ERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYT 217
Query: 482 -------AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 534
A+ F+EM ++PD I+ +++L +C G +ELG K+ E L +
Sbjct: 218 GIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQT 276
Query: 535 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLK 594
+++MY + + +A++ ++ + D W ++ + N + E+ +
Sbjct: 277 GVCNALIEMYSKCGVISQAIQLFGQMEGK-DVISWSTMISGYAYHGNAHGAIETFNEMQR 335
Query: 595 VEA-DNGSRYVQLANVYAAEGKWNEMGRIRKEMR 627
+ NG ++ L + + G W E R MR
Sbjct: 336 AKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMR 369
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/595 (28%), Positives = 293/595 (49%), Gaps = 69/595 (11%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N+++ Y K ++ A+ LFD RD+VS+N+M+S YA + L L RM+ D
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEI-LKLLYRMRG--D 239
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ D+ T L++S + + G+ +H +VKT D+ ++LI MY KCG +
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
Y V + D V W +I+G ++ G
Sbjct: 300 YRVL---------------------------------ETIPNKDVVCWTVMISGLMRLGR 326
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
E+AL +F EM++ G + + +ASV+++C L LG VH VL++
Sbjct: 327 AEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH----------- 375
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
G + +P A +SLI Y+ G++ K+ +F+ ++ER+ V W
Sbjct: 376 -------------------GYTLDTP-ALNSLITMYAKCGHLDKSLVIFERMNERDLVSW 415
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
A+ SGY ++ LF E + D+ +V++L AC+ L +GK H ++
Sbjct: 416 NAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI 475
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
R+ + + +ALVDMYSKCG + A++ F + S +DV+ + ++IAGY HG + A
Sbjct: 476 RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSI--SWKDVVSWGILIAGYGFHGKGDIA 533
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 542
++++ E L ++P+ + F+A+LS+C H G+V+ G K F SM D+ V P H AC+VD
Sbjct: 534 LEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVD 593
Query: 543 MYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 602
+ R ++E A +F ++ + + G L+AC+ N T + E++++++ +
Sbjct: 594 LLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGH 653
Query: 603 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 657
YV+L + +AA +W+++ +MR KLPG S I + F TSHS
Sbjct: 654 YVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS 708
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 43/354 (12%)
Query: 224 FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKC 283
N T +N+ I +G ++ L+ F M+ + + T S+L AC L+ L G
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 284 VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 343
+H VL N S+ ++SS +V+ Y K G + +
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAH---------------------------- 99
Query: 344 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL- 402
A+++F+ + ER+ V WTA+ Y ++ L E R + + P + ++ +L
Sbjct: 100 ---ARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMR-FQGIKPGPVTLLEMLS 155
Query: 403 GACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD 462
G I L H + + + D + ++++++Y KC ++ A+ F + RD
Sbjct: 156 GVLEITQLQCL----HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM--EQRD 209
Query: 463 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFM 522
++ +N MI+GYA G ++ ++L M L+PD TF A LS +E+G
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHC 269
Query: 523 SM-KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
+ K ++V +++ ++ MY + + E + + IP + D W ++
Sbjct: 270 QIVKTGFDV--DMHLKTALITMYLKCGKEEASYRVLETIPNK-DVVCWTVMISG 320
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 147/322 (45%), Gaps = 53/322 (16%)
Query: 9 ALVVYRDHVQA----IKSGLASSIFTCNQLIHL---YSIHG-LLQEAHKLFDKMPHRNAF 60
AL+V+ + +Q+ +AS + +C QL S+HG +L+ + L +
Sbjct: 330 ALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL-------DTP 382
Query: 61 SWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYA-GADGCDTVALDLFARMQS 119
+ N++I Y K +L ++ +F+ + RDLVS+N+++S YA D C AL LF M+
Sbjct: 383 ALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCK--ALLLFEEMK- 439
Query: 120 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 179
+ +D T+ ++L + + GK +H ++++ ++L+DMYSKCG
Sbjct: 440 FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYL 499
Query: 180 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 239
A F ++ WK D VSW LIAGY
Sbjct: 500 EAAQRCFD----------------------------SISWK-----DVVSWGILIAGYGF 526
Query: 240 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC-SNQF 298
+G + AL ++ E + G+E N +VLS+C+ ++ G + + ++++ G N
Sbjct: 527 HGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHE 586
Query: 299 VSSGIVDFYCKCGNMRYAESVY 320
+ +VD C+ + A Y
Sbjct: 587 HLACVVDLLCRAKRIEDAFKFY 608
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 22/204 (10%)
Query: 391 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 450
L+PDT ++L ACA LS G H +L + D ++S+LV++Y+K G +A+A
Sbjct: 42 LLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHAR 101
Query: 451 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 510
K F+ + +RDV+ + MI Y+ G +A L EM +KP +T + +LS
Sbjct: 102 KVFEEM--RERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLS---- 155
Query: 511 RGLVELGEKFFMSMKEDYNVLPEIYHYAC-------MVDMYGRGNQLEKAVEFMRKIPIQ 563
G++E+ + + D+ V IY + C M+++Y + + + A + ++ Q
Sbjct: 156 -GVLEITQ---LQCLHDFAV---IYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQME-Q 207
Query: 564 IDATIWGAFLNA-CKINNNTTLVK 586
D W ++ + N + ++K
Sbjct: 208 RDMVSWNTMISGYASVGNMSEILK 231
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 196/669 (29%), Positives = 309/669 (46%), Gaps = 81/669 (12%)
Query: 6 VRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAI 65
VR L + H I SG+ +L+ YS L EA + + + WN +
Sbjct: 56 VRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVL 115
Query: 66 IMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIG 125
I +Y K LF+ + +Y M+S I
Sbjct: 116 IASYAK-------NELFEEV----IAAYKRMVS-----------------------KGIR 141
Query: 126 MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNV 185
D T ++L + V +G+ +H + ++ S + ++LI MY + + A +
Sbjct: 142 PDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRL 201
Query: 186 FSGCDGVV--DLVSKNAMVAACCRDGKMDMALNVF---WKNPEFNDTVSWNTLIAGYVQN 240
F D + D VS NA++ +G A +F W + ++WN + G +Q
Sbjct: 202 F---DRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQT 258
Query: 241 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN--DGCSNQF 298
G AL L M + + L AC+ + ++LGK +H L + + DG N
Sbjct: 259 GNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDN-- 316
Query: 299 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 358
V + ++ Y KC ++R+A LI +F E +
Sbjct: 317 VRNTLITMYSKCKDLRHA-----------------LI--------------VFRQTEENS 345
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
W ++ SGY + + E L RE P+++ + ++L CA A L GK+ H
Sbjct: 346 LCTWNSIISGYAQLNKSEEASHLLREM-LVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 419 AYILRTKLNMD-EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 477
YILR K D L ++LVD+Y+K G I A++ L+ S RD + Y +I GY + G
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM--SKRDEVTYTSLIDGYGNQG 462
Query: 478 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 537
A+ LF+EM + +KPD +T VA+LSAC H LV GE+ FM M+ +Y + P + H+
Sbjct: 463 EGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHF 522
Query: 538 ACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEA 597
+CMVD+YGR L KA + + +P + W LNAC I+ NT + K A E+LL+++
Sbjct: 523 SCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKP 582
Query: 598 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 657
+N YV +AN+YAA G W+++ +R MR K PGC+WI ++G +F+ GDTS
Sbjct: 583 ENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSP 642
Query: 658 KADAIYSTL 666
+A Y L
Sbjct: 643 EACNTYPLL 651
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 127/582 (21%), Positives = 242/582 (41%), Gaps = 97/582 (16%)
Query: 116 RMQSARDTIGMDEITL---TTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDM 172
R+QS+ D++ L ++L+ +R G Q+H++ + + + + L+
Sbjct: 30 RLQSSSAV--SDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTF 87
Query: 173 YSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNT 232
YS A+N+ + +++ N + + WN
Sbjct: 88 YS-------AFNLHNEAQSIIE--------------------------NSDILHPLPWNV 114
Query: 233 LIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 292
LIA Y +N E + + M+ KGI + T SVL AC + G+ VH + +
Sbjct: 115 LIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSS 174
Query: 293 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 352
S+ +V + ++ Y + NM A ++ + + + +++I Y+S+G ++A LFD
Sbjct: 175 YKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFD 234
Query: 353 SL----SERNYVVWTALCSGYVKSQQCEAVFKLFREFRT-TEALIPDTMIIVNVLGACAI 407
+ E + + W + G +++ L R +L P MII L AC++
Sbjct: 235 KMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII--GLKACSL 292
Query: 408 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 467
+ LGK+ H + + + + + + L+ MYSKC ++ +A F+ + + +N
Sbjct: 293 IGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFR--QTEENSLCTWN 350
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF------- 520
+I+GYA +A L +EML +P++IT ++L C ++ G++F
Sbjct: 351 SIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRR 410
Query: 521 --FMSMKEDYNVLPEIY----------------------HYACMVDMYGRGNQLEKAVEF 556
F +N L ++Y Y ++D G GNQ E V
Sbjct: 411 KCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLID--GYGNQGEGGVAL 468
Query: 557 -----MRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR-----YVQL 606
M + I+ D A L+AC +++ LV + E +K++ + G R + +
Sbjct: 469 ALFKEMTRSGIKPDHVTVVAVLSAC---SHSKLVHEGERLFMKMQCEYGIRPCLQHFSCM 525
Query: 607 ANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 648
++Y G + I M K + G +W + N H+
Sbjct: 526 VDLYGRAGFLAKAKDIIHNMPYKPS----GATWATLLNACHI 563
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 173/547 (31%), Positives = 272/547 (49%), Gaps = 41/547 (7%)
Query: 130 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 189
T ++ + ++ R + GK++H ++ + + L+ MY+KCGS +A VF
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 190 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 249
DL S N MV G ++ A +F + E D+ SW ++ GYV+ E AL L
Sbjct: 147 PNR-DLCSWNVMVNGYAEVGLLEEARKLFDEMTE-KDSYSWTAMVTGYVKKDQPEEALVL 204
Query: 250 FIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 308
+ M N T++ ++A +KC++ GK +H +++ S++ + S ++D Y
Sbjct: 205 YSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYG 264
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 368
KCG + +A+ +FD + E++ V WT++
Sbjct: 265 KCGCI-------------------------------DEARNIFDKIVEKDVVSWTSMIDR 293
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 428
Y KS + F LF E P+ VL ACA T LGKQ H Y+ R +
Sbjct: 294 YFKSSRWREGFSLFSEL-VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 429 DEKLASALVDMYSKCGNIAYAEKSFQLVTD--SDRDVILYNVMIAGYAHHGFENKAIQLF 486
+S+LVDMY+KCGNI A+ V D D++ + +I G A +G ++A++ F
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKH----VVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYF 408
Query: 487 QEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR 546
+LK KPD +TFV +LSAC H GLVE G +FF S+ E + + HY C+VD+ R
Sbjct: 409 DLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLAR 468
Query: 547 GNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQL 606
+ E+ + ++P++ +W + L C N L ++A +EL K+E +N YV +
Sbjct: 469 SGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTM 528
Query: 607 ANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
AN+YAA GKW E G++RK M+ TK PG SW ++ HVF + DTSH + I L
Sbjct: 529 ANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFL 588
Query: 667 VCLYGKL 673
L K+
Sbjct: 589 RELRKKM 595
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 142/556 (25%), Positives = 235/556 (42%), Gaps = 113/556 (20%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H SG I N+L+ +Y+ G L +A K+FD+MP+R+ SWN ++ Y + L
Sbjct: 108 HEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLL 167
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDT--VALDLFARMQSARDTIGMDEITLTT 133
+AR LFD + +D S+ +M++ Y D + V L R+ ++R I T++
Sbjct: 168 EEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNI----FTVSI 223
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
+ +A ++ + GK++H ++V+ D + SSL+DMY KCG EA N+F D +V
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIF---DKIV 280
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
+ D VSW ++I Y ++ +LF E+
Sbjct: 281 E------------------------------KDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
+ N++T A VL+AC L +LGK VH + + F SS +VD Y KCGN+
Sbjct: 311 VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
A+ V G + +SLI G + G +A + FD L L SG
Sbjct: 371 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLL----------LKSG----- 415
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ-THAYILRTKLNMDEKL 432
PD + VNVL AC + G + ++ + +L+
Sbjct: 416 -----------------TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDH 458
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
+ LVD+ ++ G FE QL + ++
Sbjct: 459 YTCLVDLLARSGR--------------------------------FE----QLKSVISEM 482
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE-IYHYACMVDMYGRGNQLE 551
+KP + ++L C G ++L E+ + +E + + PE Y M ++Y + E
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLAEE---AAQELFKIEPENPVTYVTMANIYAAAGKWE 539
Query: 552 KAVEFMRKIPIQIDAT 567
+ + MRK +I T
Sbjct: 540 EEGK-MRKRMQEIGVT 554
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 172/369 (46%), Gaps = 6/369 (1%)
Query: 244 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 303
++ L ++++ + + T +++ C+ + L+ GK VH + + + + +
Sbjct: 67 QKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRL 126
Query: 304 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 363
+ Y KCG++ A V+ + + + + ++ GY+ G + +A++LFD ++E++ WT
Sbjct: 127 LRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWT 186
Query: 364 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 423
A+ +GYVK Q E L+ + P+ + + A A + GK+ H +I+R
Sbjct: 187 AMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVR 246
Query: 424 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 483
L+ DE L S+L+DMY KCG I A F + ++DV+ + MI Y +
Sbjct: 247 AGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV--EKDVVSWTSMIDRYFKSSRWREGF 304
Query: 484 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 543
LF E++ +P+ TF +L+AC ELG++ M P + + +VDM
Sbjct: 305 SLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDM 363
Query: 544 YGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRY 603
Y + +E A + P + D W + + C N + + LLK + +
Sbjct: 364 YTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK--SGTKPDH 420
Query: 604 VQLANVYAA 612
V NV +A
Sbjct: 421 VTFVNVLSA 429
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 275 bits (704), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 196/699 (28%), Positives = 326/699 (46%), Gaps = 118/699 (16%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +KSGL +F + L +Y G+L +A K+FD++P
Sbjct: 196 HGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD------------------- 236
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
R+ V++N+++ Y +G + A+ LF+ M+ + + +T++T L
Sbjct: 237 ------------RNAVAWNALMVGYV-QNGKNEEAIRLFSDMR--KQGVEPTRVTVSTCL 281
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ SA + V GKQ H+ + +L +SL++ Y K G A VF
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD-------- 333
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+F K D V+WN +I+GYVQ G +E A+ + M
Sbjct: 334 --------------------RMFEK-----DVVTWNLIISGYVQQGLVEDAIYMCQLMRL 368
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+ ++Y+ TLA+++SA + LKLGK V +++ S+ ++S ++D Y KCG++
Sbjct: 369 EKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVD 428
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER------------------ 357
A+ V+ K ++L+A Y+ G +A RLF +
Sbjct: 429 AKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLR 488
Query: 358 ---------------------NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTM 396
N + WT + +G V++ E R+ + + L P+
Sbjct: 489 NGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES-GLRPNAF 547
Query: 397 IIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK----LASALVDMYSKCGNIAYAEKS 452
I L ACA A+L +G+ H YI+R N+ + ++LVDMY+KCG+I AEK
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIR---NLQHSSLVSIETSLVDMYAKCGDINKAEKV 604
Query: 453 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 512
F S+ + L N MI+ YA +G +AI L++ + + LKPD IT +LSAC H G
Sbjct: 605 FGSKLYSE--LPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAG 662
Query: 513 LVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAF 572
+ + F + ++ P + HY MVD+ + EKA+ + ++P + DA + +
Sbjct: 663 DINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSL 722
Query: 573 LNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEAT 632
+ +C T LV +LL+ E +N YV ++N YA EG W+E+ ++R+ M+ K
Sbjct: 723 VASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLK 782
Query: 633 KLPGCSWIYV--ENGIHVFTSGDTSHSKADAIYSTLVCL 669
K PGCSWI + E G+HVF + D +H++ + I L L
Sbjct: 783 KKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALL 821
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 232/504 (46%), Gaps = 71/504 (14%)
Query: 57 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 116
RN + +++ Y K L A LF R++ S+ +++ C+ AL F
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG-ALMGFVE 163
Query: 117 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 176
M + I D + + L+ +G+ +H Y+VK+ + F SSL DMY KC
Sbjct: 164 M--LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 177 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 236
G +A VF ++ +NA V+WN L+ G
Sbjct: 222 GVLDDASKVFD------EIPDRNA---------------------------VAWNALMVG 248
Query: 237 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 296
YVQNG E A+ LF +M ++G+E + T+++ LSA + ++ GK HA+ + N +
Sbjct: 249 YVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELD 308
Query: 297 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 356
+ + +++FYCK G + YAE V FD + E
Sbjct: 309 NILGTSLLNFYCKVGLIEYAEMV-------------------------------FDRMFE 337
Query: 357 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 416
++ V W + SGYV+ E + + R E L D + + ++ A A L LGK+
Sbjct: 338 KDVVTWNLIISGYVQQGLVEDAIYMCQLMR-LEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 417 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 476
Y +R D LAS ++DMY+KCG+I A+K F + ++D+IL+N ++A YA
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFD--STVEKDLILWNTLLAAYAES 454
Query: 477 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 536
G +A++LF M + P+ IT+ ++ + G V+ + F+ M+ ++P +
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLIS 513
Query: 537 YACMVDMYGRGNQLEKAVEFMRKI 560
+ M++ + E+A+ F+RK+
Sbjct: 514 WTTMMNGMVQNGCSEEAILFLRKM 537
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 124/541 (22%), Positives = 224/541 (41%), Gaps = 139/541 (25%)
Query: 14 RDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAH 73
+ H AI +G+ L++ Y GL++ A +FD+M ++ +WN II Y++
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ-- 352
Query: 74 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
+ LV D + + R++ + D +TL T
Sbjct: 353 --------------QGLVE--------------DAIYMCQLMRLEKLK----YDCVTLAT 380
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF------- 186
+++ +A+ + GK++ Y ++ + + S+++DMY+KCGS +A VF
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKD 440
Query: 187 -------------SGCDG--------------VVDLVSKNAMVAACCRDGKMDMALNVFW 219
SG G ++++ N ++ + R+G++D A ++F
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFL 500
Query: 220 KNPE---FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLK 276
+ + +SW T++ G VQNG E A+ +M E G+ N ++ LSAC L
Sbjct: 501 QMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLA 560
Query: 277 CLKLGKCVHALVLKNDGCSNQF-VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLI 335
L +G+ +H +++N S+ + + +VD Y KCG++ AE V+ ++++I
Sbjct: 561 SLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMI 620
Query: 336 AGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 395
+ Y+ GN+ +A L+ SL E V L PD
Sbjct: 621 SAYALYGNLKEAIALYRSL---------------------EGV-----------GLKPDN 648
Query: 396 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 455
+ I NVL AC HA + + + D+ SK +S +
Sbjct: 649 ITITNVLSAC-----------NHAGDINQAIEI-------FTDIVSK--------RSMKP 682
Query: 456 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 515
+ Y +M+ A G KA++L +EM KPDA +L+++C + E
Sbjct: 683 CLEH------YGLMVDLLASAGETEKALRLIEEM---PFKPDARMIQSLVASCNKQRKTE 733
Query: 516 L 516
L
Sbjct: 734 L 734
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 127/288 (44%), Gaps = 36/288 (12%)
Query: 234 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 293
++ +NG ++ AL+L EM + + +L C + L GK +HA +LKN
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 294 --CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 351
N+++ + +V FY KC + AE LF
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEV-------------------------------LF 130
Query: 352 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 411
L RN W A+ + CE F E E + PD ++ NV AC
Sbjct: 131 SKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENE-IFPDNFVVPNVCKACGALKWS 189
Query: 412 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 471
G+ H Y++++ L +AS+L DMY KCG + A K F + DR+ + +N ++
Sbjct: 190 RFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEI--PDRNAVAWNALMV 247
Query: 472 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 519
GY +G +AI+LF +M K ++P +T LSA + G VE G++
Sbjct: 248 GYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 182/671 (27%), Positives = 313/671 (46%), Gaps = 82/671 (12%)
Query: 7 RDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAII 66
R L V + H + + + F ++LI Y+ ++A +FD++ RNAFS+NA++
Sbjct: 36 RLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALL 95
Query: 67 MAYIKAHNLTQARALFDS----------ASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 116
+AY A +LF S A+ D +S + +L A +G CD L AR
Sbjct: 96 IAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSG---CDDFWLGSLAR 152
Query: 117 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 176
Q+H ++++ D F + +I Y+KC
Sbjct: 153 --------------------------------QVHGFVIRGGFDSDVFVGNGMITYYTKC 180
Query: 177 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 236
+ A VF D +S+ D VSWN++I+G
Sbjct: 181 DNIESARKVF-------DEMSER--------------------------DVVSWNSMISG 207
Query: 237 YVQNGYMERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 295
Y Q+G E ++ M+ + N T+ SV AC L G VH +++N
Sbjct: 208 YSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQM 267
Query: 296 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 355
+ + + ++ FY KCG++ YA +++ + K ++I+GY + G + +A LF +
Sbjct: 268 DLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEME 327
Query: 356 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 415
W A+ SG +++ E V FRE + P+T+ + ++L + + L GK
Sbjct: 328 SIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSR-PNTVTLSSLLPSLTYSSNLKGGK 386
Query: 416 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 475
+ HA+ +R + + + ++++D Y+K G + A++ F DR +I + +I YA
Sbjct: 387 EIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFD--NCKDRSLIAWTAIITAYAV 444
Query: 476 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 535
HG + A LF +M + KPD +T A+LSA H G ++ + F SM Y++ P +
Sbjct: 445 HGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVE 504
Query: 536 HYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKV 595
HYACMV + R +L A+EF+ K+PI A +WGA LN + + + + A + L ++
Sbjct: 505 HYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEM 564
Query: 596 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTS 655
E +N Y +AN+Y G+W E +R +M+ K+PG SWI E G+ F + D+S
Sbjct: 565 EPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSS 624
Query: 656 HSKADAIYSTL 666
++ +Y +
Sbjct: 625 CERSKEMYEII 635
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 226/491 (46%), Gaps = 34/491 (6%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
+ F N +I Y K N+ AR +FD S RD+VS+NSM+S Y+ + + ++ M
Sbjct: 166 DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK-KMYKAM 224
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
+ D + +T+ ++ + + +G ++H M++ + +++I Y+KCG
Sbjct: 225 LACSD-FKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG 283
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
S A +F D V+ A+++ G + A+ +F E +WN +I+G
Sbjct: 284 SLDYARALFDEM-SEKDSVTYGAIISGYMAHGLVKEAMALF-SEMESIGLSTWNAMISGL 341
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 297
+QN + E + F EMI G N TL+S+L + T LK GK +HA ++N +N
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNI 401
Query: 298 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL--- 354
+V++ I+D Y K G + A+ V+ +S A +++I Y+ G+ A LFD +
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCL 461
Query: 355 -SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 413
++ + V TA+ S + S + +F T + P AC +
Sbjct: 462 GTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHY-----ACMVSVLSRA 516
Query: 414 GKQTHAYILRTKLNMDE--KLASALVDMYSKCGNIAYA----EKSFQLVTDSDRDVILYN 467
GK + A +K+ +D K+ AL++ S G++ A ++ F++ ++ + Y
Sbjct: 517 GKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGN---YT 573
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT-----------FVALLSAC-RHRGLVE 515
+M Y G +A + +M +I LK T F+A S+C R + + E
Sbjct: 574 IMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYE 633
Query: 516 LGEKFFMSMKE 526
+ E SM +
Sbjct: 634 IIEGLVESMSD 644
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 190/669 (28%), Positives = 328/669 (49%), Gaps = 58/669 (8%)
Query: 15 DHVQAIKSGLASSIF--TCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKA 72
D VQ+++ S + CN + + + + D P ++AI
Sbjct: 26 DPVQSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYP---- 81
Query: 73 HNLTQARALF-DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITL 131
NL A+ LF + + ++ YN+M+SA + + L++ M R + D T
Sbjct: 82 ENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSK---NECFGLYSSM--IRHRVSPDRQTF 136
Query: 132 TTMLNLSAKLRVVCYGKQMHSYMVKTAN-DLSKFALSSLIDMYSKCGSFREAYNVFSGCD 190
++ S+ L V KQ+H +++ + L + +SL+ Y + G+F A VF+
Sbjct: 137 LYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFA--- 190
Query: 191 GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 250
+ P D S+N +I GY + G+ AL L+
Sbjct: 191 -----------------------------RMPH-PDVSSFNVMIVGYAKQGFSLEALKLY 220
Query: 251 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC--SNQFVSSGIVDFYC 308
+M+ GIE +++T+ S+L C L ++LGK VH + + SN +S+ ++D Y
Sbjct: 221 FKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYF 280
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 368
KC A+ + + K + ++++ G+ G+M A+ +FD + +R+ V W +L G
Sbjct: 281 KCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFG 340
Query: 369 YVKSQQCE--AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 426
Y K + C+ V +LF E E + PD + +V+++ A LS G+ H ++R +L
Sbjct: 341 YSK-KGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQL 399
Query: 427 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLF 486
D L+SAL+DMY KCG I A F+ T +++DV L+ MI G A HG +A+QLF
Sbjct: 400 KGDAFLSSALIDMYCKCGIIERAFMVFK--TATEKDVALWTSMITGLAFHGNGQQALQLF 457
Query: 487 QEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR 546
M + + P+ +T +A+L+AC H GLVE G F MK+ + PE HY +VD+ R
Sbjct: 458 GRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCR 517
Query: 547 GNQLEKAVEFM-RKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 605
++E+A + + +K+P++ ++WG+ L+AC+ + + A ELLK+E + YV
Sbjct: 518 AGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVL 577
Query: 606 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD-TSHSKADAIYS 664
L+N+YA G+W + R+ M + K G S + G+H F + + +H + I
Sbjct: 578 LSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKR 637
Query: 665 TLVCLYGKL 673
L LY ++
Sbjct: 638 ILQHLYNEM 646
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/553 (30%), Positives = 273/553 (49%), Gaps = 78/553 (14%)
Query: 92 SYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMH 151
SYN++LS+YA CD + +FA + D T + K + GKQ+H
Sbjct: 73 SYNTLLSSYAV---CDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 152 SYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKM 211
+ K + +SL+ Y CG R A VF G+M
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVF----------------------GEM 167
Query: 212 DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 271
+ D VSW +I G+ + G + AL F +M +E N T VL +
Sbjct: 168 PV-----------RDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVS 213
Query: 272 CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT 331
+ CL LGK +H L+LK + + ++D Y KC +
Sbjct: 214 SGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQL------------------ 255
Query: 332 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 391
+ A R+F L +++ V W ++ SG V ++ + LF +T+ +
Sbjct: 256 -------------SDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 392 IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 451
PD I+ +VL ACA + G+ H YIL + D + +A+VDMY+KCG I A +
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALE 362
Query: 452 SFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 511
F + ++V +N ++ G A HG ++++ F+EM+K+ KP+ +TF+A L+AC H
Sbjct: 363 IFNGI--RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHT 420
Query: 512 GLVELGEKFFMSMK-EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWG 570
GLV+ G ++F MK +YN+ P++ HY CM+D+ R L++A+E ++ +P++ D I G
Sbjct: 421 GLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICG 480
Query: 571 AFLNACKINNNTTLVKQAEEEL---LKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMR 627
A L+ACK N TL++ +E L L +E ++ YV L+N++AA +W+++ RIR+ M+
Sbjct: 481 AILSACK--NRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMK 538
Query: 628 GKEATKLPGCSWI 640
K +K+PG S+I
Sbjct: 539 VKGISKVPGSSYI 551
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 131/555 (23%), Positives = 216/555 (38%), Gaps = 146/555 (26%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H K G I+ N L+H Y + G + A K+F +MP R+ SW II + +
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT--- 185
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
G ALD F++M + + T +L
Sbjct: 186 -----------------------------GLYKEALDTFSKMD-----VEPNLATYVCVL 211
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
S ++ + GK +H ++K A+ +S ++LIDMY KC +A VF
Sbjct: 212 VSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVF--------- 262
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM-I 254
G++ E D VSWN++I+G V + A+ LF M
Sbjct: 263 -------------GEL-----------EKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
GI+ + H L SVLSAC L + G+ VH +L + + + IVD Y KCG +
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 374
A ++ GI K+ F ++L+ G + G+ ++ R F+ + + +
Sbjct: 359 TALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK-------------- 404
Query: 375 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 434
P+ + + L AC + G++ + + N+ KL
Sbjct: 405 ------------------PNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEH 446
Query: 435 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 494
Y MI G ++A++L + M +
Sbjct: 447 -------------------------------YGCMIDLLCRAGLLDEALELVKAM---PV 472
Query: 495 KPDAITFVALLSACRHRG-LVELGEKF---FMSMK-ED---YNVLPEIYHYACMVDMYGR 546
KPD A+LSAC++RG L+EL ++ F+ ++ ED Y +L I+ D R
Sbjct: 473 KPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVAR 532
Query: 547 GNQLEKAVEFMRKIP 561
+L K V+ + K+P
Sbjct: 533 IRRLMK-VKGISKVP 546
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 190/711 (26%), Positives = 317/711 (44%), Gaps = 139/711 (19%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +K+GL +F N L+ Y HG + +A +LFD MP RN SW
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSW------------- 256
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI-TLTTM 134
NSM+ ++ + L L M+ D M ++ TL T+
Sbjct: 257 ------------------NSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
L + A+ R + GK +H + VK D ++L+DMYSKCG A +F
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-------- 350
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
KM+ NV VSWNT++ G+ G + +M+
Sbjct: 351 ---------------KMNNNKNV----------VSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 255 EKG--IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
G ++ ++ T+ + + C L K +H LK + N+ V++ V Y KCG+
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGN----------MTKAKRLFDSLS------- 355
+ YA+ V+ GI K+ + ++LI G++ + M + L DS +
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 356 ----------------------ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 393
ER+ V+ ++ S Y+ + V LF +
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 394 DTMI------------------------------IVNVLGACAIQATLSLGKQTHAYILR 423
+T+I ++ V GAC++ +L LG++ HAY L+
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625
Query: 424 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 483
L D +A +L+DMY+K G+I + K F + ++ +N MI GY HG +AI
Sbjct: 626 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL--KEKSTASWNAMIMGYGIHGLAKEAI 683
Query: 484 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 543
+LF+EM + PD +TF+ +L+AC H GL+ G ++ MK + + P + HYAC++DM
Sbjct: 684 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743
Query: 544 YGRGNQLEKAVEFM-RKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 602
GR QL+KA+ + ++ + D IW + L++C+I+ N + ++ +L ++E +
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 803
Query: 603 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 653
YV L+N+YA GKW ++ ++R+ M K GCSWI + + F G+
Sbjct: 804 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE 854
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 193/440 (43%), Gaps = 96/440 (21%)
Query: 106 CDTVALDLFARMQSARDTIGMDEIT----------LTTMLNLSAKLRVVCYGKQMHSYM- 154
C+T LD ++ ++ +G DE + L +L S K + + G+++H +
Sbjct: 54 CETGDLD--KSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVS 111
Query: 155 --VKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMD 212
+ ND + +I MY+ CGS ++ VF L SKN
Sbjct: 112 GSTRLRND--DVLCTRIITMYAMCGSPDDSRFVFDA------LRSKNLF----------- 152
Query: 213 MALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH-TLASVLSA 271
WN +I+ Y +N + L FIEMI H T V+ A
Sbjct: 153 ----------------QWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKA 196
Query: 272 CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT 331
C G+ + +G VH LV+K +G+V E V+ G
Sbjct: 197 CAGMSDVGIGLAVHGLVVK----------TGLV------------EDVFVG--------- 225
Query: 332 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTE-- 389
++L++ Y + G +T A +LFD + ERN V W ++ + + E F L E
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 390 -ALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAY 448
A +PD +V VL CA + + LGK H + ++ +L+ + L +AL+DMYSKCG I
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN 345
Query: 449 AEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK--ISLKPDAITFVALLS 506
A+ F++ +++++V+ +N M+ G++ G + + ++ML +K D +T + +
Sbjct: 346 AQMIFKM--NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 507 ACRHRGLVELGEKFFMSMKE 526
C H E F S+KE
Sbjct: 404 VCFH-------ESFLPSLKE 416
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 265/484 (54%), Gaps = 46/484 (9%)
Query: 192 VVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFI 251
+V L S M A K++ +NVF WNTLI GY + G A +L+
Sbjct: 60 LVSLPSPPPMSYAHKVFSKIEKPINVFI----------WNTLIRGYAEIGNSISAFSLYR 109
Query: 252 EMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 310
EM G +E + HT ++ A T + ++LG+ +H++V+++ S +V + ++ Y C
Sbjct: 110 EMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC 169
Query: 311 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 370
G++ A ++FD + E++ V W ++ +G+
Sbjct: 170 GDV-------------------------------ASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 371 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 430
++ + E L+ E ++ + PD IV++L ACA L+LGK+ H Y+++ L +
Sbjct: 199 ENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 257
Query: 431 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
++ L+D+Y++CG + A+ F + D ++ + + +I G A +GF +AI+LF+ M
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVD--KNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 491 KIS-LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQ 549
L P ITFV +L AC H G+V+ G ++F M+E+Y + P I H+ CMVD+ R Q
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 375
Query: 550 LEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANV 609
++KA E+++ +P+Q + IW L AC ++ ++ L + A ++L++E ++ YV L+N+
Sbjct: 376 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 435
Query: 610 YAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCL 669
YA+E +W+++ +IRK+M K+PG S + V N +H F GD SH ++DAIY+ L +
Sbjct: 436 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 495
Query: 670 YGKL 673
G+L
Sbjct: 496 TGRL 499
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 134/269 (49%), Gaps = 8/269 (2%)
Query: 315 YAESVYAGIGIKSPFATSSLI---AGYSSKGNMTKAKRLFDSLSER-NYVVWTALCSGYV 370
+A S+ G+ I LI S M+ A ++F + + N +W L GY
Sbjct: 37 HAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYA 96
Query: 371 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 430
+ + F L+RE R + + PDT ++ A A + LG+ H+ ++R+
Sbjct: 97 EIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLI 156
Query: 431 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
+ ++L+ +Y+ CG++A A K F + ++D++ +N +I G+A +G +A+ L+ EM
Sbjct: 157 YVQNSLLHLYANCGDVASAYKVFDKM--PEKDLVAWNSVINGFAENGKPEEALALYTEMN 214
Query: 491 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 550
+KPD T V+LLSAC G + LG++ + M + + ++ ++D+Y R ++
Sbjct: 215 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNVLLDLYARCGRV 273
Query: 551 EKAVEFMRKIPIQIDATIWGAFLNACKIN 579
E+A ++ + ++ W + + +N
Sbjct: 274 EEAKTLFDEM-VDKNSVSWTSLIVGLAVN 301
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 115/267 (43%), Gaps = 68/267 (25%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H I+SG S I+ N L+HLY+ G + A+K+FDKMP ++ +WN++I +
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF------ 197
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+G AL L+ M S I D T+ ++L
Sbjct: 198 --------------------------AENGKPEEALALYTEMNS--KGIKPDGFTIVSLL 229
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ AK+ + GK++H YM+K + + + L+D+Y++CG EA +F ++
Sbjct: 230 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFD------EM 283
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM-I 254
V KN +VSW +LI G NG+ + A+ LF M
Sbjct: 284 VDKN---------------------------SVSWTSLIVGLAVNGFGKEAIELFKYMES 316
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLG 281
+G+ + T +L AC+ +K G
Sbjct: 317 TEGLLPCEITFVGILYACSHCGMVKEG 343
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 180/626 (28%), Positives = 301/626 (48%), Gaps = 70/626 (11%)
Query: 14 RDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAH 73
+ H + I S L + C L+ L +HGL+ ++ + + +P + +
Sbjct: 3 KKHYKPILSQLEN----CRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCP---ETM 55
Query: 74 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
NL+ AR++F+S + +NSM+ Y+ + D AL + M R D T
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDK-ALIFYQEM--LRKGYSPDYFTFPY 112
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
+L + LR + +G +H ++VKT +++ + + L+ MY
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMY-------------------- 152
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
CC G+++ L VF P++N V+W +LI+G+V N A+ F EM
Sbjct: 153 ----------MCC--GEVNYGLRVFEDIPQWN-VVAWGSLISGFVNNNRFSDAIEAFREM 199
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
G++ N+ + +L AC K + GK H L+ G F S
Sbjct: 200 QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGF-LQGLGFDPYFQSK------------ 246
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
+G ATS LI Y+ G++ A+ LFD + ER V W ++ +GY ++
Sbjct: 247 ---------VGFNVILATS-LIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
E +F + + PD + ++V+ A IQ LG+ HAY+ +T D +
Sbjct: 297 DAEEALCMFLDMLDL-GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV 355
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML-KI 492
ALV+MY+K G+ A+K+F+ + +D I + V+I G A HG N+A+ +FQ M K
Sbjct: 356 CALVNMYAKTGDAESAKKAFEDL--EKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKG 413
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
+ PD IT++ +L AC H GLVE G+++F M++ + + P + HY CMVD+ R + E+
Sbjct: 414 NATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEE 473
Query: 553 AVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 612
A ++ +P++ + IWGA LN C I+ N L + + + E YV L+N+YA
Sbjct: 474 AERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAK 533
Query: 613 EGKWNEMGRIRKEMRGKEATKLPGCS 638
G+W ++ IR+ M+ K K+ G S
Sbjct: 534 AGRWADVKLIRESMKSKRVDKVLGHS 559
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 151/366 (41%), Gaps = 49/366 (13%)
Query: 343 NMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL 402
N++ A+ +F+S+ + +W ++ GY S + ++E + PD VL
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEM-LRKGYSPDYFTFPYVL 114
Query: 403 GACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD 462
AC+ + G H ++++T ++ +++ L+ MY CG + Y + F+ + +
Sbjct: 115 KACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI--PQWN 172
Query: 463 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACR-----------HR 511
V+ + +I+G+ ++ + AI+ F+EM +K + V LL AC H
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 512 GLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGA 571
L LG + K +NV+ ++DMY + L A +P + + W +
Sbjct: 233 FLQGLGFDPYFQSKVGFNVILA----TSLIDMYAKCGDLRTARYLFDGMPERTLVS-WNS 287
Query: 572 FLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEA 631
+ N + AEE L ++ + ++ A K + IR M
Sbjct: 288 IITGYSQNGD------AEEAL--------CMFLDMLDLGIAPDKVTFLSVIRASM----- 328
Query: 632 TKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL------YLTFTELKQLDE 685
+ GCS + IH + S T K AI LV +Y K F +L++ D
Sbjct: 329 --IQGCSQL--GQSIHAYVS-KTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDT 383
Query: 686 IQGNIV 691
I +V
Sbjct: 384 IAWTVV 389
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 162/518 (31%), Positives = 282/518 (54%), Gaps = 12/518 (2%)
Query: 155 VKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC--DGVV-DLVSKNAMVAACC-RDGK 210
+ ++ LS LID ++C + RE + + G++ D V+ + ++A CC
Sbjct: 16 MPSSGSLSGNTYLRLID--TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSD 73
Query: 211 MDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI--EKGIEYNQHTLASV 268
M+ A VF + N V WNT+I G+ ++ + E A+++FI+M+ ++ + T SV
Sbjct: 74 MNYAYLVFTRINHKNPFV-WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 269 LSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 328
A L + G+ +H +V+K + F+ + ++ Y CG + A ++ G+
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDV 192
Query: 329 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 388
A +S+I G++ G + +A+ LFD + +RN V W ++ SG+V++ + + +FRE +
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 389 EALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAY 448
+ + PD +V++L ACA G+ H YI+R + ++ + +AL+DMY KCG I
Sbjct: 253 D-VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEE 311
Query: 449 AEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 508
F+ + + +N MI G A++GFE +A+ LF E+ + L+PD+++F+ +L+AC
Sbjct: 312 GLNVFECA--PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC 369
Query: 509 RHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATI 568
H G V ++FF MKE Y + P I HY MV++ G LE+A ++ +P++ D I
Sbjct: 370 AHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVI 429
Query: 569 WGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRG 628
W + L+AC+ N + K+A + L K++ D YV L+N YA+ G + E R M+
Sbjct: 430 WSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKE 489
Query: 629 KEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
++ K GCS I V+ +H F S +H K+ IYS L
Sbjct: 490 RQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLL 527
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 226/478 (47%), Gaps = 49/478 (10%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLY-SIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHN 74
H IK+GL S T ++++ + + A+ +F ++ H+N F WN II + ++
Sbjct: 45 HASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRS-- 102
Query: 75 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
S+ M A+ +F M + ++ +T ++
Sbjct: 103 -----------------SFPEM-------------AISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
+L G+Q+H ++K + F ++++ MY CG EA+ +F G G D
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIG-FD 191
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
+V+ N+M+ + G +D A N+F + P+ N VSWN++I+G+V+NG + AL +F EM
Sbjct: 192 VVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNG-VSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
EK ++ + T+ S+L+AC L + G+ +H +++N N V + ++D YCKCG +
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIE 310
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTAL---CS 367
+V+ K +S+I G ++ G +A LF L E + V + + C+
Sbjct: 311 EGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACA 370
Query: 368 GYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN 427
+ + + F+L +E E I ++VNVLG L ++ A I +
Sbjct: 371 HSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAG------LLEEAEALIKNMPVE 424
Query: 428 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA-GYAHHGFENKAIQ 484
D + S+L+ K GN+ A+++ + + D D V+++ YA +G +A++
Sbjct: 425 EDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVE 482
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 174/618 (28%), Positives = 296/618 (47%), Gaps = 78/618 (12%)
Query: 57 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 116
+ F N +I Y K L QA +LFD RD VS+NS++S Y G L+L A+
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV-GAAEEPLNLLAK 239
Query: 117 MQSARDTIGMDEITLTTMLN---LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 173
M RD + + L ++L ++ + G +H Y K + ++L+DMY
Sbjct: 240 MH--RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMY 297
Query: 174 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 233
+K GS +E A+ +F P N V++N +
Sbjct: 298 AKNGSLKE--------------------------------AIKLFSLMPSKN-VVTYNAM 324
Query: 234 IAGYVQ-----NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 288
I+G++Q + A LF++M +G+E + T + VL AC+ K L+ G+ +HAL+
Sbjct: 325 ISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALI 384
Query: 289 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 348
KN+ S++F+ S +++ Y G S++ M
Sbjct: 385 CKNNFQSDEFIGSALIELYALMG---------------------------STEDGM---- 413
Query: 349 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 408
+ F S S+++ WT++ +V+++Q E+ F LFR+ ++ + P+ + ++ ACA
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH-IRPEEYTVSLMMSACADF 472
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 468
A LS G+Q Y +++ ++ + ++ + MY+K GN+ A + F + + DV Y+
Sbjct: 473 AALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF--IEVQNPDVATYSA 530
Query: 469 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 528
MI+ A HG N+A+ +F+ M +KP+ F+ +L AC H GLV G K+F MK DY
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDY 590
Query: 529 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQA 588
+ P H+ C+VD+ GR +L A + Q W A L++C++ ++ + K+
Sbjct: 591 RINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRV 650
Query: 589 EEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 648
E L+++E + YV L N+Y G + +R+ MR + K P SWI + N H
Sbjct: 651 AERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHS 710
Query: 649 FTSGDTSHSKADAIYSTL 666
F D SH + IY+ L
Sbjct: 711 FAVADLSHPSSQMIYTML 728
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 201/466 (43%), Gaps = 107/466 (22%)
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
+ +AK V GK H +M+K++ + + L++L++MY KC RE
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKC---RE------------ 97
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
+ A +F + PE N +S+N+LI+GY Q G+ E+A+ LF+E
Sbjct: 98 -----------------LGFARQLFDRMPERN-IISFNSLISGYTQMGFYEQAMELFLEA 139
Query: 254 IEKGIEYNQHTLASVLSACTGLKC-LKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
E ++ ++ T A L C G +C L LG+ +H LV+ N F+ + ++D Y KCG
Sbjct: 140 REANLKLDKFTYAGALGFC-GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGK 198
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
+ A S LFD ER+ V W +L SGYV+
Sbjct: 199 LDQAMS-------------------------------LFDRCDERDQVSWNSLISGYVRV 227
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAI---QATLSLGKQTHAYILRTKLNMD 429
E L + + L T + +VL AC I + + G H Y + + D
Sbjct: 228 GAAEEPLNLLAKMH-RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFD 286
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG-----FENKAIQ 484
+ +AL+DMY+K G++ A K F L+ ++V+ YN MI+G+ ++A +
Sbjct: 287 IVVRTALLDMYAKNGSLKEAIKLFSLM--PSKNVVTYNAMISGFLQMDEITDEASSEAFK 344
Query: 485 LFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF--------FMSMKEDYNVLPEIY- 535
LF +M + L+P TF +L AC +E G + F S + + L E+Y
Sbjct: 345 LFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYA 404
Query: 536 ---------------------HYACMVDMYGRGNQLEKAVEFMRKI 560
+ M+D + + QLE A + R++
Sbjct: 405 LMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 176/438 (40%), Gaps = 99/438 (22%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H K G+ I L+ +Y+ +G L+EA KLF MP +N ++NA+I +++ +
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
T D + A LF MQ R + T + +L
Sbjct: 335 T---------------------------DEASSEAFKLFMDMQ--RRGLEPSPSTFSVVL 365
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + + YG+Q+H+ + K +F S+LI++Y+ GS + F+
Sbjct: 366 KACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAST------ 419
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
K D+A SW ++I +VQN +E A LF ++
Sbjct: 420 -------------SKQDIA--------------SWTSMIDCHVQNEQLESAFDLFRQLFS 452
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
I ++T++ ++SAC L G+ + +K+ + V + + Y K GNM
Sbjct: 453 SHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPL 512
Query: 316 AESVYAGIGIKSP-FAT-SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
A V+ I +++P AT S++I+ + G+ +A +F+S+
Sbjct: 513 ANQVF--IEVQNPDVATYSAMISSLAQHGSANEALNIFESMK------------------ 552
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG-KQTHAYILRTKLNMDEKL 432
T + P+ + VL AC ++ G K ++N +EK
Sbjct: 553 --------------THGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKH 598
Query: 433 ASALVDMYSKCGNIAYAE 450
+ LVD+ + G ++ AE
Sbjct: 599 FTCLVDLLGRTGRLSDAE 616
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 13/221 (5%)
Query: 347 AKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 406
A++LFD + ERN + + +L SGY + E +LF E R L D LG C
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREAN-LKLDKFTYAGALGFCG 159
Query: 407 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILY 466
+ L LG+ H ++ L+ L + L+DMYSKCG + A F +RD + +
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC--DERDQVSW 217
Query: 467 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC---RHRGLVELGEK---F 520
N +I+GY G + + L +M + L ++L AC + G +E G +
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 521 FMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP 561
+ +++++ ++DMY + L++A++ +P
Sbjct: 278 TAKLGMEFDIVVR----TALLDMYAKNGSLKEAIKLFSLMP 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 406 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 465
A ++ LGK H +++++ LN L + L++MY KC + +A + F + + R++I
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPE--RNIIS 115
Query: 466 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMK 525
+N +I+GY GF +A++LF E + +LK D T+ L C R ++LGE +
Sbjct: 116 FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGE-LLHGLV 174
Query: 526 EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
+ +++ ++DMY + +L++A+ + + D W + ++
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISG 223
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/535 (29%), Positives = 270/535 (50%), Gaps = 69/535 (12%)
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
+LN R + G+++H++M+KT + + + L+ Y KC +A V
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLD------ 111
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
+ PE N VSW +I+ Y Q G+ ALT+F EM
Sbjct: 112 --------------------------EMPEKN-VVSWTAMISRYSQTGHSSEALTVFAEM 144
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
+ + N+ T A+VL++C L LGK +H L++K + S+ FV S ++D Y K
Sbjct: 145 MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA--- 201
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
G + +A+ +F+ L ER+ V TA+ +GY +
Sbjct: 202 ----------------------------GQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
E ++F + E + P+ + ++L A + A L GKQ H ++LR +L L
Sbjct: 234 LDEEALEMFHRLHS-EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML-KI 492
++L+DMYSKCGN++YA + F + +R I +N M+ GY+ HG + ++LF+ M +
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNM--PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSM-KEDYNVLPEIYHYACMVDMYGRGNQLE 551
+KPDA+T +A+LS C H + + G F M +Y P HY C+VDM GR +++
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRID 410
Query: 552 KAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYA 611
+A EF++++P + A + G+ L AC+++ + + + L+++E +N YV L+N+YA
Sbjct: 411 EAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470
Query: 612 AEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
+ G+W ++ +R M K TK PG SWI E +H F + D +H + + + + +
Sbjct: 471 SAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKM 525
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 189/454 (41%), Gaps = 101/454 (22%)
Query: 65 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 124
+++ Y K L AR + D +++VS+ +M+S Y+ G + AL +FA M R
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYS-QTGHSSEALTVFAEMM--RSDG 149
Query: 125 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 184
+E T T+L + + GKQ+H +VK D F SSL+DMY+K G +EA
Sbjct: 150 KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEARE 209
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 244
+F C D+VS A +IAGY Q G E
Sbjct: 210 IFE-CLPERDVVSCTA--------------------------------IIAGYAQLGLDE 236
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 304
AL +F + +G+ N T AS+L+A +GL L GK H VL+ + + + ++
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 296
Query: 305 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 364
D Y KCGN+ YA ++ D++ ER + W A
Sbjct: 297 DMYSKCGNLSYARRLF-------------------------------DNMPERTAISWNA 325
Query: 365 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 424
+ GY K V +LFR R + + PD + ++ VL C +H + T
Sbjct: 326 MLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGC-----------SHGRMEDT 374
Query: 425 KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 484
LN+ + + + + +K G Y + D M+ G + +
Sbjct: 375 GLNIFDGMVAG--EYGTKPGTEHYG-----CIVD----------ML------GRAGRIDE 411
Query: 485 LFQEMLKISLKPDAITFVALLSACRHRGLVELGE 518
F+ + ++ KP A +LL ACR V++GE
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGE 445
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 38/234 (16%)
Query: 42 GLLQEAHKLFDKMPH-RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAY 100
GL ++ H L K + + F ++++ Y KA + +AR +F+ RD+VS ++++ Y
Sbjct: 170 GLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGY 229
Query: 101 AGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAND 160
A G D AL++F R+ S + + + +T ++L + L ++ +GKQ H ++++
Sbjct: 230 AQL-GLDEEALEMFHRLHS--EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 286
Query: 161 LSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK 220
+SLIDMYSKCG+ A +F
Sbjct: 287 FYAVLQNSLIDMYSKCGNLSYARRLFDNM------------------------------- 315
Query: 221 NPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI-EKGIEYNQHTLASVLSACT 273
PE +SWN ++ GY ++G L LF M EK ++ + TL +VLS C+
Sbjct: 316 -PE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/658 (27%), Positives = 311/658 (47%), Gaps = 113/658 (17%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H Q I+ L + +LI S+ A ++F+++ N N++I A+ A N
Sbjct: 39 HAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAH--AQNS 96
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+A F +F+ MQ R + D T +L
Sbjct: 97 QPYQAFF------------------------------VFSEMQ--RFGLFADNFTYPFLL 124
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + K MH+++ K + ++LID YS+CG GV D
Sbjct: 125 KACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGL-----------GVRD- 172
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
A+ +F K E DTVSWN+++ G V+ G + A LF EM +
Sbjct: 173 ------------------AMKLFEKMSE-RDTVSWNSMLGGLVKAGELRDARRLFDEMPQ 213
Query: 256 KG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
+ I +N ++D Y +C M
Sbjct: 214 RDLISWNT----------------------------------------MLDGYARCREMS 233
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD--SLSERNYVVWTALCSGYVKS 372
A ++ + ++ + S+++ GYS G+M A+ +FD L +N V WT + +GY +
Sbjct: 234 KAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEK 293
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
+ +L + L D ++++L AC LSLG + H+ + R+ L + +
Sbjct: 294 GLLKEADRLVDQM-VASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYV 352
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTD-SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 491
+AL+DMY+KCGN+ +K+F + D +D++ +N M+ G HG +AI+LF M +
Sbjct: 353 LNALLDMYAKCGNL---KKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 492 ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLE 551
++PD +TF+A+L +C H GL++ G +F SM++ Y+++P++ HY C+VD+ GR +L+
Sbjct: 410 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLK 469
Query: 552 KAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYA 611
+A++ ++ +P++ + IWGA L AC+++N + K+ + L+K++ + Y L+N+YA
Sbjct: 470 EAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYA 529
Query: 612 AEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCL 669
A W + IR +M+ K G S + +E+GIH FT D SH K+D IY L L
Sbjct: 530 AAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 24/263 (9%)
Query: 309 KCGNMRYAESVYAGIGIKSPFA----TSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 364
KC N+ + ++A I ++ LI+ S A R+F+ + E N + +
Sbjct: 28 KCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNS 87
Query: 365 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 424
L + ++ Q F +F E + L D +L AC+ Q+ L + K H +I +
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRF-GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKL 146
Query: 425 KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 484
L+ D + +AL+D YS+CG + + S+RD + +N M+ G G A +
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 206
Query: 485 LFQEMLKISLKPDAITFVALLSA---CRHRGLVELGEKFFMSMKEDYNVLPE--IYHYAC 539
LF EM + D I++ +L CR E+ + F E + +PE ++
Sbjct: 207 LFDEMPQR----DLISWNTMLDGYARCR-----EMSKAF-----ELFEKMPERNTVSWST 252
Query: 540 MVDMYGRGNQLEKAVEFMRKIPI 562
MV Y + +E A K+P+
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPL 275
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/650 (27%), Positives = 305/650 (46%), Gaps = 80/650 (12%)
Query: 17 VQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLT 76
VQ IK+ L S T N HL IH L H H + F N ++ +
Sbjct: 13 VQQIKT-LISVACTVN---HLKQIHVSLINHHL------HHDTFLVNLLLKRTLFFRQTK 62
Query: 77 QARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLN 136
+ LF ++ YNS+++ + + LDLF ++ + + + T +L
Sbjct: 63 YSYLLFSHTQFPNIFLYNSLINGFVN-NHLFHETLDLFLSIR--KHGLYLHGFTFPLVLK 119
Query: 137 LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLV 196
+ G +HS +VK + A++SL+ +YS G +A+ +F D + D
Sbjct: 120 ACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLF---DEIPD-- 174
Query: 197 SKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEK 256
V+W L +GY +G A+ LF +M+E
Sbjct: 175 ----------------------------RSVVTWTALFSGYTTSGRHREAIDLFKKMVEM 206
Query: 257 GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 316
G++ + + + VLSAC + L G+ + + + + N FV + +V+ Y KC
Sbjct: 207 GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC------ 260
Query: 317 ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE 376
G M KA+ +FDS+ E++ V W+ + GY + +
Sbjct: 261 -------------------------GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 377 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 436
+LF + E L PD IV L +CA L LG+ + I R + + +A+AL
Sbjct: 296 EGIELFLQM-LQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 437 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 496
+DMY+KCG +A + F+ + ++D+++ N I+G A +G + +F + K+ + P
Sbjct: 355 IDMYAKCGAMARGFEVFKEM--KEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412
Query: 497 DAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 556
D TF+ LL C H GL++ G +FF ++ Y + + HY CMVD++GR L+ A
Sbjct: 413 DGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRL 472
Query: 557 MRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKW 616
+ +P++ +A +WGA L+ C++ +T L + +EL+ +E N YVQL+N+Y+ G+W
Sbjct: 473 ICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRW 532
Query: 617 NEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
+E +R M K K+PG SWI +E +H F + D SH +D IY+ L
Sbjct: 533 DEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKL 582
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/557 (22%), Positives = 223/557 (40%), Gaps = 150/557 (26%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +K G + L+ +YS G L +AHKLFD++P R+ +W A+ Y
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTT---- 189
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
S HR+ A+DLF +M + D + +L
Sbjct: 190 --------SGRHRE--------------------AIDLFKKMVEM--GVKPDSYFIVQVL 219
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + + G+ + YM + + F ++L+++Y+KCG +A +VF D +V+
Sbjct: 220 SACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVF---DSMVE- 275
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
D V+W+T+I GY N + + + LF++M++
Sbjct: 276 -----------------------------KDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+ ++ +Q ++ LS+C L L LG+ +L+ +++ +N F+++ ++D Y KC
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC----- 361
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
G M + +F + E++ V+ A SG K+
Sbjct: 362 --------------------------GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHV 395
Query: 376 EAVFKLFREFRTTEAL--IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
+ F +F + TE L PD + +L C HA +++ L ++
Sbjct: 396 KLSFAVFGQ---TEKLGISPDGSTFLGLLCGC-----------VHAGLIQDGLRFFNAIS 441
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
YA K R V Y M+ + G + A +L +M
Sbjct: 442 C------------VYALK---------RTVEHYGCMVDLWGRAGMLDDAYRLICDM---P 477
Query: 494 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP-EIYHYACMVDMYGRGNQLEK 552
++P+AI + ALLS CR +L E +KE + P +Y + ++Y G + ++
Sbjct: 478 MRPNAIVWGALLSGCRLVKDTQLAETV---LKELIALEPWNAGNYVQLSNIYSVGGRWDE 534
Query: 553 AVEF--------MRKIP 561
A E M+KIP
Sbjct: 535 AAEVRDMMNKKGMKKIP 551
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 183/618 (29%), Positives = 318/618 (51%), Gaps = 25/618 (4%)
Query: 65 IIMAYIKAHNLTQARALFDSASH---RDLVSYNSMLSAYAGADGCDTVALDLFARMQSAR 121
+I Y + L AR +F++ S DL +NS+L A + G AL+L+ M+ R
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANV-SHGLYENALELYRGMRQ-R 152
Query: 122 DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFRE 181
G D L +L L + H+ +++ + ++ L+ +Y K G +
Sbjct: 153 GLTG-DGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGD 211
Query: 182 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF-W-KNPEFN-DTVSWNTLIAGYV 238
AYN+F V + +S N M+ ++ + A+ +F W + EF D V+W ++++ +
Sbjct: 212 AYNLFVEMP-VRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 239 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 298
Q G E L F M G + LA S C L+ L + + VH V+K G ++
Sbjct: 271 QCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIK--GGFEEY 328
Query: 299 VSS--GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 356
+ S ++ Y K G ++ AE ++ I K + +SLI + G + +A LF L E
Sbjct: 329 LPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEE 388
Query: 357 RNYV--------VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 408
N+V WT++ G + + + FR+ + ++ L +++ I +L CA
Sbjct: 389 MNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVL-ANSVTICCILSICAEL 447
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 468
L+LG++ H +++RT ++ + + +ALV+MY+KCG ++ F+ + D +D+I +N
Sbjct: 448 PALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRD--KDLISWNS 505
Query: 469 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 528
+I GY HGF KA+ +F M+ PD I VA+LSAC H GLVE G + F SM + +
Sbjct: 506 IIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRF 565
Query: 529 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQA 588
+ P+ HYAC+VD+ GR L++A E ++ +P++ + GA LN+C+++ N + +
Sbjct: 566 GLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGI 625
Query: 589 EEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 648
+L +E + Y+ L+N+Y+A G+W E +R + K+ K+ G SWI V+ +
Sbjct: 626 ASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYK 685
Query: 649 FTSGDTSHSKADAIYSTL 666
F+SG S+ + IY L
Sbjct: 686 FSSGSIVQSEFETIYPVL 703
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 205/448 (45%), Gaps = 48/448 (10%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H Q I+ GL ++ N+L+ LY G + +A+ LF +MP RN SWN +I + + ++
Sbjct: 181 HTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDC 240
Query: 76 TQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITL 131
A +F+ D V++ S+LS ++ + V L F M+ + + + + L
Sbjct: 241 ESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDV-LKYFHLMRMSGNAVSGE--AL 297
Query: 132 TTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG 191
++ A+L + +++H Y++K + + ++LI +Y K G ++A ++F
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 192 VVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN-------DTVSWNTLIAGYVQNGYME 244
+ S N+++ + GK+D AL++F + E N + V+W ++I G G +
Sbjct: 358 -KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGD 416
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 304
+L F +M + N T+ +LS C L L LG+ +H V++ N V + +V
Sbjct: 417 DSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALV 476
Query: 305 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 364
+ Y KCG + V+ I K + +S+I GY G KA +FD +
Sbjct: 477 NMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM---------- 526
Query: 365 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT-HAYILR 423
+ SG+ PD + +V VL AC+ + G++ ++ R
Sbjct: 527 ISSGFH----------------------PDGIALVAVLSACSHAGLVEKGREIFYSMSKR 564
Query: 424 TKLNMDEKLASALVDMYSKCGNIAYAEK 451
L ++ + +VD+ + G + A +
Sbjct: 565 FGLEPQQEHYACIVDLLGRVGFLKEASE 592
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/628 (28%), Positives = 297/628 (47%), Gaps = 72/628 (11%)
Query: 42 GLLQEAHKLFDKMPH-RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAY 100
G + H K P + F A + ++K +++ A +F+ RD ++N+MLS +
Sbjct: 69 GCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGF 128
Query: 101 AGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAND 160
+ D A LF M+ + I D +T+ T++ ++ + + + MH+ ++ D
Sbjct: 129 CQSGHTDK-AFSLFREMR--LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 161 LSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK 220
+ ++ I Y KCG A VF D R +
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAID----------------RGDRT--------- 220
Query: 221 NPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKL 280
VSWN++ Y G A L+ M+ + + + T ++ ++C + L
Sbjct: 221 ------VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQ 274
Query: 281 GKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSS 340
G+ +H+ +++ G + A ++ I+ YS
Sbjct: 275 GRLIHS------------------------------HAIHLGTD-QDIEAINTFISMYSK 303
Query: 341 KGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE-FRTTEALIPDTMIIV 399
+ A+ LFD ++ R V WT + SGY + + LF ++ E PD + ++
Sbjct: 304 SEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK--PDLVTLL 361
Query: 400 NVLGACAIQATLSLGKQTHAYILRTKLNMDE-KLASALVDMYSKCGNIAYAEKSFQLVTD 458
+++ C +L GK A D + +AL+DMYSKCG+I A F
Sbjct: 362 SLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD--NT 419
Query: 459 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 518
++ V+ + MIAGYA +G +A++LF +M+ + KP+ ITF+A+L AC H G +E G
Sbjct: 420 PEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGW 479
Query: 519 KFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKI 578
++F MK+ YN+ P + HY+CMVD+ GR +LE+A+E +R + + DA IWGA LNACKI
Sbjct: 480 EYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKI 539
Query: 579 NNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCS 638
+ N + +QA E L +E + YV++AN+YAA G W+ RIR M+ + K PG S
Sbjct: 540 HRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGES 599
Query: 639 WIYVENGIHVFTSGDTSHSKADAIYSTL 666
I V H FT G+ H + + IY TL
Sbjct: 600 VIQVNGKNHSFTVGEHGHVENEVIYFTL 627
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 32/282 (11%)
Query: 229 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 288
+WN I V +L LF EM G E N T V AC L + + VHA +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 289 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 348
+K+ S+ FV + VD + KC ++ YA V
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKV----------------------------- 109
Query: 349 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 408
F+ + ER+ W A+ SG+ +S + F LFRE R E + PD++ ++ ++ + + +
Sbjct: 110 --FERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE-ITPDSVTVMTLIQSASFE 166
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 468
+L L + HA +R +++ +A+ + Y KCG++ A+ F+ + DR V+ +N
Sbjct: 167 KSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNS 226
Query: 469 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 510
M Y+ G A L+ ML+ KPD TF+ L ++C++
Sbjct: 227 MFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 109/258 (42%), Gaps = 56/258 (21%)
Query: 29 FTCNQLIHLYSIH-GLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASH 87
T +LIH ++IH G Q+ + N I Y K+ + AR LFD +
Sbjct: 272 LTQGRLIHSHAIHLGTDQDIEAI------------NTFISMYSKSEDTCSARLLFDIMTS 319
Query: 88 RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYG 147
R VS+ M+S YA D AL LF M + + D +TL ++++ K + G
Sbjct: 320 RTCVSWTVMISGYAEKGDMDE-ALALFHAMIKSGEK--PDLVTLLSLISGCGKFGSLETG 376
Query: 148 KQMHS----YMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVA 203
K + + Y K N + ++LIDMYSKCGS EA ++F
Sbjct: 377 KWIDARADIYGCKRDNVM---ICNALIDMYSKCGSIHEARDIFD---------------- 417
Query: 204 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 263
PE V+W T+IAGY NG AL LF +MI+ + N
Sbjct: 418 ----------------NTPE-KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHI 460
Query: 264 TLASVLSACTGLKCLKLG 281
T +VL AC L+ G
Sbjct: 461 TFLAVLQACAHSGSLEKG 478
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 381 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMY 440
LFRE + P+ V ACA A + + HA+++++ D + +A VDM+
Sbjct: 39 LFREMKRG-GFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMF 97
Query: 441 SKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 500
KC ++ YA K F+ + +RD +N M++G+ G +KA LF+EM + PD++T
Sbjct: 98 VKCNSVDYAAKVFERM--PERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVT 155
Query: 501 FVALLSACRHRGLVELGE 518
+ L+ + ++L E
Sbjct: 156 VMTLIQSASFEKSLKLLE 173
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 184/650 (28%), Positives = 312/650 (48%), Gaps = 88/650 (13%)
Query: 40 IHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSA 99
IHG + D P + +++ Y K + +A +F S RD+ YN+++S
Sbjct: 82 IHGFMVRK-GFLDDSPR----AGTSLVNMYAKCGLMRRAVLVF-GGSERDVFGYNALISG 135
Query: 100 YAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAN 159
+ +G A++ + M++ + I D+ T ++L S + + K++H K
Sbjct: 136 FV-VNGSPLDAMETYREMRA--NGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGF 191
Query: 160 DLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFW 219
D + S L+ YSK S +A VF
Sbjct: 192 DSDCYVGSGLVTSYSKFMSVEDAQKVFD-------------------------------- 219
Query: 220 KNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK 279
+ P+ +D+V WN L+ GY Q E AL +F +M E+G+ ++HT+ SVLSA T +
Sbjct: 220 ELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDID 279
Query: 280 LGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 339
G+ +H L +K S+ VS+ ++D Y K + A S++ + + F +S++ +
Sbjct: 280 NGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHD 339
Query: 340 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 399
G+ LF+ + LCSG + PD + +
Sbjct: 340 YCGDHDGTLALFERM----------LCSG----------------------IRPDIVTLT 367
Query: 400 NVLGACAIQATLSLGKQTHAYILRTKL----NMDEKLASALVDMYSKCGNIAYAEKSFQL 455
VL C A+L G++ H Y++ + L + +E + ++L+DMY KCG++ + ++
Sbjct: 368 TVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDL----RDARM 423
Query: 456 VTDSDR--DVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGL 513
V DS R D +N+MI GY A+ +F M + +KPD ITFV LL AC H G
Sbjct: 424 VFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGF 483
Query: 514 VELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFL 573
+ G F M+ YN+LP HYAC++DM GR ++LE+A E PI + +W + L
Sbjct: 484 LNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSIL 543
Query: 574 NACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATK 633
++C+++ N L A + L ++E ++ YV ++NVY GK+ E+ +R MR + K
Sbjct: 544 SSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKK 603
Query: 634 LPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVC----LYGKLYLTFTE 679
PGCSWI ++NG+H F +G+ +H + +I+ L ++G Y+T +
Sbjct: 604 TPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYMTVDD 653
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 161/410 (39%), Gaps = 104/410 (25%)
Query: 12 VYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRN-AFSWNAIIMAYI 70
V + H A K G S + + L+ YS +++A K+FD++P R+ + WNA++ Y
Sbjct: 179 VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 71 KAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEIT 130
+ A L +F++M+ + +G+ T
Sbjct: 239 QIFRFEDA--------------------------------LLVFSKMR--EEGVGVSRHT 264
Query: 131 LTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCD 190
+T++L+ + G+ +H VKT + ++LIDMY K EA ++F D
Sbjct: 265 ITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD 324
Query: 191 GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 250
D +WN+++ + G + L LF
Sbjct: 325 E---------------------------------RDLFTWNSVLCVHDYCGDHDGTLALF 351
Query: 251 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV----LKNDGCSNQFVSSGIVDF 306
M+ GI + TL +VL C L L+ G+ +H + L N SN+F+ + ++D
Sbjct: 352 ERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDM 411
Query: 307 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 366
Y KCG++R A V+ + +K + + +I GY + S E +++ +C
Sbjct: 412 YVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQ-----------SCGELALDMFSCMC 460
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 416
VK PD + V +L AC+ L+ G+
Sbjct: 461 RAGVK---------------------PDEITFVGLLQACSHSGFLNEGRN 489
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 399 VNVLGACAIQATLSLGKQTHAYILRTK-LNMDEKLASALVDMYSKCGNIAYAEKSFQLVT 457
+ L CA + G+Q H +++R L+ + ++LV+MY+KCG ++ +
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCG---LMRRAVLVFG 120
Query: 458 DSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG 517
S+RDV YN +I+G+ +G A++ ++EM + PD TF +LL L ++
Sbjct: 121 GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK 180
Query: 518 EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
+ ++ K ++ + Y + +V Y + +E A + ++P + D+ +W A +N
Sbjct: 181 KVHGLAFKLGFD--SDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 9/196 (4%)
Query: 24 LASSIFTCNQLIHLY---SIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARA 80
L + + TC +L L IHG + + L K N F N+++ Y+K +L AR
Sbjct: 366 LTTVLPTCGRLASLRQGREIHGYMIVSGLLNRK--SSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 81 LFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAK 140
+FDS +D S+N M++ Y G C +ALD+F+ M R + DEIT +L +
Sbjct: 424 VFDSMRVKDSASWNIMINGY-GVQSCGELALDMFSCM--CRAGVKPDEITFVGLLQACSH 480
Query: 141 LRVVCYGKQMHSYMVKTANDL-SKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKN 199
+ G+ + M N L + + +IDM + EAY + + V
Sbjct: 481 SGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWR 540
Query: 200 AMVAACCRDGKMDMAL 215
+++++C G D+AL
Sbjct: 541 SILSSCRLHGNKDLAL 556
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 190/704 (26%), Positives = 323/704 (45%), Gaps = 86/704 (12%)
Query: 39 SIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLS 98
SIH L + H F + F ++ Y K + AR +FDS R+L ++++M+
Sbjct: 96 SIH-LGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIG 154
Query: 99 AYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTA 158
AY+ + VA LF M +D + D+ +L A V GK +HS ++K
Sbjct: 155 AYSRENRWREVA-KLFRLMM--KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLG 211
Query: 159 NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKM------- 211
+S++ +Y+KCG A F D+++ N+++ A C++GK
Sbjct: 212 MSSCLRVSNSILAVYAKCGELDFATKFFRRMRER-DVIAWNSVLLAYCQNGKHEEAVELV 270
Query: 212 ----------------------------DMALNVFWKNPEFN---DTVSWNTLIAGYVQN 240
D A+++ K F D +W +I+G + N
Sbjct: 271 KEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHN 330
Query: 241 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 300
G +AL +F +M G+ N T+ S +SAC+ LK + G VH++ +K + V
Sbjct: 331 GMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVG 390
Query: 301 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF--------- 351
+ +VD Y KCG + A V+ + K + +S+I GY G KA LF
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 352 -------------------------------DSLSERNYVVWTALCSGYVKSQQCEAVFK 380
D +RN W + +GY+++ + + +
Sbjct: 451 PNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 381 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMY 440
LFR+ + + +P+++ I+++L ACA + ++ H +LR L+ + +AL D Y
Sbjct: 511 LFRKMQFSR-FMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTY 569
Query: 441 SKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 500
+K G+I Y+ F + +D+I +N +I GY HG A+ LF +M + P+ T
Sbjct: 570 AKSGDIEYSRTIF--LGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGT 627
Query: 501 FVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
+++ A G V+ G+K F S+ DY+++P + H + MV +YGR N+LE+A++F++++
Sbjct: 628 LSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEM 687
Query: 561 PIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMG 620
IQ + IW +FL C+I+ + + A E L +E +N + ++ +YA K
Sbjct: 688 NIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSL 747
Query: 621 RIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYS 664
K R K G SWI V N IH FT+GD S D +Y
Sbjct: 748 EGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYP 791
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 177/415 (42%), Gaps = 78/415 (18%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H IK G++S + N ++ +Y+ G L A K F +M R+ +WN++++AY +
Sbjct: 204 HSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKH 263
Query: 76 TQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI------- 124
+A L LV++N ++ Y CD A+DL +M++ T
Sbjct: 264 EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD-AAMDLMQKMETFGITADVFTWTA 322
Query: 125 --------GM------------------DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTA 158
GM + +T+ + ++ + L+V+ G ++HS VK
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 159 NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF 218
+SL+DMYSKCG +A VF D+ + N+M+ C+ G A +F
Sbjct: 383 FIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN-KDVYTWNSMITGYCQAGYCGKAYELF 441
Query: 219 WKNPEFN---------------------------------------DTVSWNTLIAGYVQ 239
+ + N +T +WN +IAGY+Q
Sbjct: 442 TRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ 501
Query: 240 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 299
NG + AL LF +M N T+ S+L AC L K+ + +H VL+ + + V
Sbjct: 502 NGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAV 561
Query: 300 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 354
+ + D Y K G++ Y+ +++ G+ K +SLI GY G+ A LF+ +
Sbjct: 562 KNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQM 616
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 146/325 (44%), Gaps = 42/325 (12%)
Query: 239 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA---LVLKNDGCS 295
+NG + A + ++G + + T +L +C + LG+ +HA L + D
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPD--- 114
Query: 296 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 355
FV + ++ Y KCG + A+++FDS+
Sbjct: 115 -VFVETKLLSMYAKCGCI-------------------------------ADARKVFDSMR 142
Query: 356 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 415
ERN W+A+ Y + + V KLFR + ++PD + +L CA + GK
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFR-LMMKDGVLPDDFLFPKILQGCANCGDVEAGK 201
Query: 416 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 475
H+ +++ ++ +++++++ +Y+KCG + +A K F+ + +RDVI +N ++ Y
Sbjct: 202 VIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRM--RERDVIAWNSVLLAYCQ 259
Query: 476 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 535
+G +A++L +EM K + P +T+ L+ G + M E + + +++
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVF 318
Query: 536 HYACMVDMYGRGNQLEKAVEFMRKI 560
+ M+ +A++ RK+
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKM 343
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 135/272 (49%), Gaps = 28/272 (10%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H A+K G + N L+ +YS G L++A K+FD + +++ ++WN++I Y +A
Sbjct: 375 HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYC 434
Query: 76 TQARALF----DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS----ARDTIGMD 127
+A LF D+ +++++N+M+S Y +G + A+DLF RM+ R+T +
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYI-KNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 128 EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS--LIDMYSKCGSFREAYNV 185
I + N GK+ + + S+F +S ++ + C + A V
Sbjct: 494 LIIAGYIQN----------GKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMV 543
Query: 186 --FSGCDGVVDLVS----KNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 239
GC +L + KNA+ + G ++ + +F E D ++WN+LI GYV
Sbjct: 544 REIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFL-GMETKDIITWNSLIGGYVL 602
Query: 240 NGYMERALTLFIEMIEKGIEYNQHTLASVLSA 271
+G AL LF +M +GI N+ TL+S++ A
Sbjct: 603 HGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 187/625 (29%), Positives = 281/625 (44%), Gaps = 102/625 (16%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H KS LA + QL Y+++ L A KLFD P R+ F WN+II AY KAH
Sbjct: 28 HSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQF 87
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
T +LF D N + A + DT G+
Sbjct: 88 TTVLSLFSQILRSDTRPDNFTYACLARG-------------FSESFDTKGL--------- 125
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ +H + + + S+++ YSK G EA +F
Sbjct: 126 ------------RCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLF--------- 164
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
C D+AL WN +I GY G+ ++ + LF M
Sbjct: 165 ----------CSIPDPDLAL--------------WNVMILGYGCCGFWDKGINLFNLMQH 200
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+G + N +T+ ++ S L + VHA LK + S+ +V +V+ Y +C +
Sbjct: 201 RGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIAS 260
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
A SV+ I A SSLI GYS GN +A
Sbjct: 261 ACSVFNSISEPDLVACSSLITGYSRCGNHKEA---------------------------- 292
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
LF E R + PD +++ VLG+CA + GK+ H+Y++R L +D K+ SA
Sbjct: 293 ---LHLFAELRMS-GKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSA 348
Query: 436 LVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
L+DMYSKCG + A F + +++++ +N +I G HGF + A + F E+L++ L
Sbjct: 349 LIDMYSKCGLLKCAMSLFAGI--PEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLI 406
Query: 496 PDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVE 555
PD ITF ALL C H GL+ G++ F MK ++ + P+ HY MV + G +LE+A E
Sbjct: 407 PDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFE 466
Query: 556 FMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRY-VQLANVYAAEG 614
F+ + ID+ I GA L+ C+++ NT L + E + K + S Y V L+NVYA G
Sbjct: 467 FVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYG 526
Query: 615 KWNEMGRIRKEMRGKEATKLPGCSW 639
+W+E+ R+R + KLPG SW
Sbjct: 527 RWDEVERLRDGISESYGGKLPGISW 551
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 190/675 (28%), Positives = 321/675 (47%), Gaps = 118/675 (17%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
NA++ Y KA A +F++ D+VS+N++LS + + +AL+ RM+SA
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD----NQIALNFVVRMKSA-- 168
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ D T +T L+ G Q+ S +VKT + +S I MYS+ GSFR
Sbjct: 169 GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFR-- 226
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG- 241
G V D +S F D +SWN+L++G Q G
Sbjct: 227 -----GARRVFDEMS--------------------------FKDMISWNSLLSGLSQEGT 255
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 301
+ A+ +F +M+ +G+E + + SV++ C LKL + +H L +K S V +
Sbjct: 256 FGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGN 315
Query: 302 GIVDFYCKCG------------------------------------NMRYAESVYA---- 321
++ Y KCG NMR+ + VY
Sbjct: 316 ILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRF-DGVYPNEVT 374
Query: 322 ---------------------GIGIKSPFAT-----SSLIAGYSSKGNMTKAKRLFDSLS 355
G+ IK+ F + +S I Y+ + AK+ F+ ++
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 356 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL-- 413
R + W A+ SG+ ++ K+F +P+ +VL A A +S+
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGSVLNAIAFAEDISVKQ 492
Query: 414 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 473
G++ HA++L+ LN ++SAL+DMY+K GNI +EK F + S ++ ++ +I+ Y
Sbjct: 493 GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM--SQKNQFVWTSIISAY 550
Query: 474 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 533
+ HG + LF +M+K ++ PD +TF+++L+AC +G+V+ G + F M E YN+ P
Sbjct: 551 SSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPS 610
Query: 534 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELL 593
HY+CMVDM GR +L++A E M ++P ++ + L +C+++ N + + E +
Sbjct: 611 HEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAM 670
Query: 594 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVEN-----GIHV 648
+++ + YVQ+ N+YA + +W++ IRK MR K +K G SWI V + +
Sbjct: 671 EMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQG 730
Query: 649 FTSGDTSHSKADAIY 663
F+SGD SH K+D IY
Sbjct: 731 FSSGDKSHPKSDEIY 745
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/470 (32%), Positives = 259/470 (55%), Gaps = 9/470 (1%)
Query: 202 VAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV---QNGYMERALTLFIEMIEKGI 258
+ AC G + A +VF P N T NT+I + A+T++ ++
Sbjct: 54 IEACSNAGHLRYAYSVFTHQPCPN-TYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCA 112
Query: 259 EYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAES 318
+ + T VL + + G+ +H V+ S+ V +G++ Y CG + A
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 319 VYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS--ERNYVVWTALCSGYVKSQQCE 376
++ + +K ++L+AGY G M +A+ L + + RN V WT + SGY KS +
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRAS 232
Query: 377 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 436
++F+ E + PD + ++ VL ACA +L LG++ +Y+ +N L +A+
Sbjct: 233 EAIEVFQRM-LMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAV 291
Query: 437 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 496
+DMY+K GNI A F+ V ++R+V+ + +IAG A HG +A+ +F M+K ++P
Sbjct: 292 IDMYAKSGNITKALDVFECV--NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRP 349
Query: 497 DAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 556
+ +TF+A+LSAC H G V+LG++ F SM+ Y + P I HY CM+D+ GR +L +A E
Sbjct: 350 NDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEV 409
Query: 557 MRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKW 616
++ +P + +A IWG+ L A ++++ L ++A EL+K+E +N Y+ LAN+Y+ G+W
Sbjct: 410 IKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRW 469
Query: 617 NEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
+E +R M+G K+ G S I VEN ++ F SGD +H + + I+ L
Sbjct: 470 DESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEIL 519
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 216/474 (45%), Gaps = 43/474 (9%)
Query: 11 VVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYI 70
++ R + ++ SGL + F + IH ++ L Q + +R+ + I A
Sbjct: 1 MIQRINALSLSSGL--NWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACS 58
Query: 71 KAHNLTQARALFDSASHRDLVSYNSMLSAYAGAD--GCDTVALDLFARMQSARDTIGMDE 128
A +L A ++F + +N+M+ A + D ++A+ ++ ++ + D
Sbjct: 59 NAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWAL--CAKPDT 116
Query: 129 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG 188
T +L ++ ++ V +G+Q+H +V D S ++ LI MY CG +A +F
Sbjct: 117 FTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDE 176
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEF-NDTVSWNTLIAGYVQNGYMERAL 247
V D+ NA++A + G+MD A ++ P + + VSW +I+GY ++G A+
Sbjct: 177 ML-VKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAI 235
Query: 248 TLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFY 307
+F M+ + +E ++ TL +VLSAC L L+LG+ + + V +++ ++D Y
Sbjct: 236 EVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMY 295
Query: 308 CKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCS 367
K GN+ A V+ + ++ +++IAG ++ G+ +A +F+ +
Sbjct: 296 AKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM------------- 342
Query: 368 GYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN 427
VK+ + P+ + + +L AC+ + LGK+ +R+K
Sbjct: 343 --VKA-----------------GVRPNDVTFIAILSACSHVGWVDLGKRLFNS-MRSKYG 382
Query: 428 MDEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 479
+ + ++D+ + G + A++ + + I +++ A HH E
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLE 436
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 184/702 (26%), Positives = 326/702 (46%), Gaps = 136/702 (19%)
Query: 32 NQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLV 91
N L+ S G + EA ++FDKMP R+ F+WN +I+AY + L+ A LF S ++ +
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 92 SYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMH 151
S+N+++S Y + G A +LF MQS D I +E TL ++L + L ++ G+Q+H
Sbjct: 92 SWNALISGYCKS-GSKVEAFNLFWEMQS--DGIKPNEYTLGSVLRMCTSLVLLLRGEQIH 148
Query: 152 SYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKM 211
+ +KT DL ++ L+ MY++C EA +F +G KN
Sbjct: 149 GHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG-----EKN------------ 191
Query: 212 DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 271
V+W +++ GY QNG+ +A+ F ++ +G + NQ+T SVL+A
Sbjct: 192 ---------------NVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTA 236
Query: 272 CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT 331
C + ++G VH ++K+ +N +V S ++D Y KC M A ++ G+ + +
Sbjct: 237 CASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSW 296
Query: 332 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 391
+S+I G +G + +A +F + ER+ +
Sbjct: 297 NSMIVGCVRQGLIGEALSMFGRMHERDMKI------------------------------ 326
Query: 392 IPDTMIIVNVLGACAIQAT-LSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 450
D I ++L A+ T + + H I++T + + +ALVDMY+K G + A
Sbjct: 327 --DDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSAL 384
Query: 451 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 510
K F+ + ++DVI + ++ G H+G ++A++LF M + PD I ++LSA
Sbjct: 385 KVFEGMI--EKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAE 442
Query: 511 RGLVELGEK---------FFMSMK---------------EDYNV------LPEIYHYACM 540
L+E G++ F S+ ED NV + ++ + C+
Sbjct: 443 LTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCL 502
Query: 541 VDMYGRGNQLE------------------------------------KAVEFMRKIPIQI 564
+ Y + LE K + + ++ ++
Sbjct: 503 IVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEP 562
Query: 565 DATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRK 624
DAT+W A L A + + N ++A + L+++E +N YVQL+N+Y+A G+ +E +R+
Sbjct: 563 DATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRR 622
Query: 625 EMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
M+ + +K PGCSW+ + +H F S D H + IYS +
Sbjct: 623 LMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKV 664
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 148/303 (48%), Gaps = 11/303 (3%)
Query: 275 LKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSL 334
L G C+H+ + SN + K G + A ++ + + F +++
Sbjct: 11 LPLKPFGSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTM 65
Query: 335 IAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPD 394
I YS+ ++ A++LF S +N + W AL SGY KS F LF E + ++ + P+
Sbjct: 66 IVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ-SDGIKPN 124
Query: 395 TMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQ 454
+ +VL C L G+Q H + ++T ++D + + L+ MY++C I+ AE F+
Sbjct: 125 EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFE 184
Query: 455 LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLV 514
+ + +++ + + M+ GY+ +GF KAI+ F+++ + + + TF ++L+AC
Sbjct: 185 TM-EGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSAC 243
Query: 515 ELGEKFFMSM-KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFL 573
+G + + K + IY + ++DMY + ++E A + + + D W + +
Sbjct: 244 RVGVQVHCCIVKSGFKT--NIYVQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMI 300
Query: 574 NAC 576
C
Sbjct: 301 VGC 303
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 176/650 (27%), Positives = 295/650 (45%), Gaps = 100/650 (15%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H IK G +++ + L+ +Y+ +++A + F ++ N+ SWNA+I +++ ++
Sbjct: 124 HGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDI 183
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A L M++A + MD T +L
Sbjct: 184 KTAFWLLG------------------------------LMEMKAA---VTMDAGTFAPLL 210
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
L KQ+H+ ++K +++I Y+ CGS +A VF G G DL
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDL 270
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+S WN++IAG+ ++ E A LFI+M
Sbjct: 271 IS--------------------------------WNSMIAGFSKHELKESAFELFIQMQR 298
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+E + +T +LSAC+G + GK +H +V+K +
Sbjct: 299 HWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIK-----------------------KG 335
Query: 316 AESVYAGIGIKSPFATSSLIAGYS--SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
E V + AT++LI+ Y G M A LF+SL ++ + W ++ +G+ +
Sbjct: 336 LEQVTS--------ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKG 387
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
E K F R++E + D +L +C+ ATL LG+Q HA ++ +E +
Sbjct: 388 LSEDAVKFFSYLRSSEIKVDDYAFSA-LLRSCSDLATLQLGQQIHALATKSGFVSNEFVI 446
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
S+L+ MYSKCG I A K FQ ++ S + +N MI GYA HG ++ LF +M +
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQIS-SKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQN 505
Query: 494 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
+K D +TF A+L+AC H GL++ G + M+ Y + P + HYA VD+ GR + KA
Sbjct: 506 VKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKA 565
Query: 554 VEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAE 613
E + +P+ D + FL C+ + Q LL++E ++ YV L+++Y+
Sbjct: 566 KELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDL 625
Query: 614 GKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIY 663
KW E ++K M+ + K+PG SWI + N + F + D S+ IY
Sbjct: 626 KKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIY 675
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 216/514 (42%), Gaps = 73/514 (14%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N I+ +YIK L A LFD RD VS+N+M+S Y + A LF M+ R
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLED-AWCLFTCMK--RS 95
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+D + + +L A ++ G+Q+H ++K + + + SSL+DMY+KC +A
Sbjct: 96 GSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDA 155
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
+ F K ++VSWN LIAG+VQ
Sbjct: 156 FEAF---------------------------------KEISEPNSVSWNALIAGFVQVRD 182
Query: 243 MERALTLFIEM-IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 301
++ A L M ++ + + T A +L+ L K VHA VLK + +
Sbjct: 183 IKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICN 242
Query: 302 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 361
++ Y CG++ A+ V+ G+G ++ +
Sbjct: 243 AMISSYADCGSVSDAKRVFDGLG------------------------------GSKDLIS 272
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
W ++ +G+ K + E+ F+LF + + + D +L AC+ + GK H +
Sbjct: 273 WNSMIAGFSKHELKESAFELFIQMQ-RHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 422 LRTKLNMDEKLASALVDMYSK--CGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 479
++ L +AL+ MY + G + A F+ + +D+I +N +I G+A G
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL--KSKDLISWNSIITGFAQKGLS 389
Query: 480 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 539
A++ F + +K D F ALL +C ++LG++ ++ + + +
Sbjct: 390 EDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIH-ALATKSGFVSNEFVISS 448
Query: 540 MVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFL 573
++ MY + +E A + ++I + W A +
Sbjct: 449 LIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 150/320 (46%), Gaps = 33/320 (10%)
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 248
C + D+ N ++ + + G + A +F + P+ D+VSWNT+I+GY G +E A
Sbjct: 29 CGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPK-RDSVSWNTMISGYTSCGKLEDAWC 87
Query: 249 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 308
LF M G + + ++ + +L +K LG+ VH LV+K N +V S +VD Y
Sbjct: 88 LFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYA 147
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 368
KC + A F +SE N V W AL +G
Sbjct: 148 KCERVE-------------------------------DAFEAFKEISEPNSVSWNALIAG 176
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 428
+V+ + + F L A+ D +L +L KQ HA +L+ L
Sbjct: 177 FVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQH 236
Query: 429 DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQE 488
+ + +A++ Y+ CG+++ A++ F + S +D+I +N MIAG++ H + A +LF +
Sbjct: 237 EITICNAMISSYADCGSVSDAKRVFDGLGGS-KDLISWNSMIAGFSKHELKESAFELFIQ 295
Query: 489 MLKISLKPDAITFVALLSAC 508
M + ++ D T+ LLSAC
Sbjct: 296 MQRHWVETDIYTYTGLLSAC 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 417 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 476
TH Y ++ D +++ ++D Y K G + YA F + RD + +N MI+GY
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPK--RDSVSWNTMISGYTSC 79
Query: 477 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIY 535
G A LF M + D +F LL +LGE+ + +K Y +Y
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC--NVY 137
Query: 536 HYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFL 573
+ +VDMY + ++E A E ++I + ++ W A +
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALI 174
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 171/591 (28%), Positives = 275/591 (46%), Gaps = 73/591 (12%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N +I ++ + + LF + S+N M+ AL L+ RM+ +
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFS-- 126
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ D+ T + AKL + G+ +HS + K + SLI MY+KCG A
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 186
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
+F D + + DTVSWN++I+GY + GY
Sbjct: 187 RKLF---DEITE------------------------------RDTVSWNSMISGYSEAGY 213
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
+ A+ LF +M E+G E ++ TL S+L AC+ L L+ G+ + + + + F+ S
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSK 273
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
++ Y KC G++ A+R+F+ + +++ V W
Sbjct: 274 LISMYGKC-------------------------------GDLDSARRVFNQMIKKDRVAW 302
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
TA+ + Y ++ + FKLF E T + PD + VL AC L LGKQ +
Sbjct: 303 TAMITVYSQNGKSSEAFKLFFEMEKT-GVSPDAGTLSTVLSACGSVGALELGKQIETHAS 361
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
L + +A+ LVDMY KCG + A + F+ + + +N MI YAH G +A
Sbjct: 362 ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEAT--WNAMITAYAHQGHAKEA 419
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 542
+ LF M S+ P ITF+ +LSAC H GLV G ++F M + ++P+I HY ++D
Sbjct: 420 LLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIID 476
Query: 543 MYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKV-EADNGS 601
+ R L++A EFM + P + D + A L AC + + ++A L+++ EA N
Sbjct: 477 LLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAG 536
Query: 602 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSG 652
YV +NV A W+E ++R MR + K PGCSWI +E + F +G
Sbjct: 537 NYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 207/467 (44%), Gaps = 53/467 (11%)
Query: 5 IVRDALVVYRDHVQAIK-------SGLASSIFTCNQLI----HLYSIHGLLQEAHK-LFD 52
++R + DH A+ SGL FT N + L I G+ + H LF
Sbjct: 102 MIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEI-GVGRSVHSSLFK 160
Query: 53 KMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALD 112
R+ +++IM Y K + AR LFD + RD VS+NSM+S Y+ A G A+D
Sbjct: 161 VGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEA-GYAKDAMD 219
Query: 113 LFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDM 172
LF +M+ + DE TL +ML + L + G+ + + LS F S LI M
Sbjct: 220 LFRKMEE--EGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISM 277
Query: 173 YSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNT 232
Y KCG A VF N M+ D V+W
Sbjct: 278 YGKCGDLDSARRVF------------NQMIK---------------------KDRVAWTA 304
Query: 233 LIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 292
+I Y QNG A LF EM + G+ + TL++VLSAC + L+LGK + +
Sbjct: 305 MITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELS 364
Query: 293 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 352
N +V++G+VD Y KCG + A V+ + +K+ +++I Y+ +G+ +A LFD
Sbjct: 365 LQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFD 424
Query: 353 SLS-ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 411
+S + + + + S V + + F E + L+P N++ + L
Sbjct: 425 RMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGML 484
Query: 412 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 458
+ ++ R DE + +A++ K ++A EK+ +++ +
Sbjct: 485 D---EAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLME 528
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 6/276 (2%)
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 368
KC ++ + A + + S + LI G+ + LF E N+ + + G
Sbjct: 46 KCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRG 105
Query: 369 YVKS-QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN 427
+ EA L+R + + L PD V ACA + +G+ H+ + + L
Sbjct: 106 LTNTWNDHEAALSLYRRMKFS-GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLE 164
Query: 428 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
D + +L+ MY+KCG + YA K F +T +RD + +N MI+GY+ G+ A+ LF+
Sbjct: 165 RDVHINHSLIMMYAKCGQVGYARKLFDEIT--ERDTVSWNSMISGYSEAGYAKDAMDLFR 222
Query: 488 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRG 547
+M + +PD T V++L AC H G + G + M + + + ++ MYG+
Sbjct: 223 KMEEEGFEPDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLGSKLISMYGKC 281
Query: 548 NQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTT 583
L+ A ++ I+ D W A + N ++
Sbjct: 282 GDLDSARRVFNQM-IKKDRVAWTAMITVYSQNGKSS 316
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 147/453 (32%), Positives = 244/453 (53%), Gaps = 7/453 (1%)
Query: 227 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK--LGKCV 284
TVSW + I +NG + A F +M G+E N T ++LS C LG +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 285 HALVLKNDGCSNQ-FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 343
H K N V + I+ Y K G + A V+ + K+ +++I GY G
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 344 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 403
+ A ++FD + ER+ + WTA+ +G+VK E FRE + + + PD + I+ L
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS-GVKPDYVAIIAALN 214
Query: 404 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 463
AC LS G H Y+L + +++++L+D+Y +CG + +A + F + R V
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM--EKRTV 272
Query: 464 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 523
+ +N +I G+A +G ++++ F++M + KPDA+TF L+AC H GLVE G ++F
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 524 MKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKIN-NNT 582
MK DY + P I HY C+VD+Y R +LE A++ ++ +P++ + + G+ L AC + NN
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNI 392
Query: 583 TLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYV 642
L ++ + L + + S YV L+N+YAA+GKW ++R++M+G K PG S I +
Sbjct: 393 VLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEI 452
Query: 643 ENGIHVFTSGDTSHSKADAIYSTLVCLYGKLYL 675
++ +HVF +GD +H + I L + L L
Sbjct: 453 DDCMHVFMAGDNAHVETTYIREVLELISSDLRL 485
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 183/418 (43%), Gaps = 77/418 (18%)
Query: 147 GKQMHSYMVKTANDLSKFAL-SSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAAC 205
G +H Y K D + + +++I MYSK G F++A VF + + V+ N M+
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK-NSVTWNTMIDGY 150
Query: 206 CRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTL 265
R G++D A +F K PE D +SW +I G+V+ GY E AL F EM G++ + +
Sbjct: 151 MRSGQVDNAAKMFDKMPE-RDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 266 ASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGI 325
+ L+ACT L L G VH VL D +N VS+ ++D YC+CG + +A V+ +
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 326 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 385
++ + +S+I G+++ GN ++ F + E+ +
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFK------------------------- 304
Query: 386 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA--SALVDMYSKC 443
PD + L AC+ + G + + I++ + ++ LVD+YS+
Sbjct: 305 -------PDAVTFTGALTACSHVGLVEEGLR-YFQIMKCDYRISPRIEHYGCLVDLYSRA 356
Query: 444 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 503
G + A++L Q M +KP+ + +
Sbjct: 357 GRL---------------------------------EDALKLVQSM---PMKPNEVVIGS 380
Query: 504 LLSACRHRG-LVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
LL+AC + G + L E+ M D NV +Y + +MY + E A + RK+
Sbjct: 381 LLAACSNHGNNIVLAER-LMKHLTDLNVKSH-SNYVILSNMYAADGKWEGASKMRRKM 436
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 169/389 (43%), Gaps = 65/389 (16%)
Query: 16 HVQAIKSGL-ASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHN 74
H A K GL + + +I +YS G ++A +FD M +N+ +WN +I Y+++
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 75 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
+ A +FD RDL+S+ +M++ + G AL F MQ + + D + +
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFV-KKGYQEEALLWFREMQIS--GVKPDYVAIIAA 212
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
LN L + +G +H Y++ + +SLID+Y +CG A VF
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY------- 265
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
N E VSWN++I G+ NG +L F +M
Sbjct: 266 --------------------------NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQ 299
Query: 255 EKGIEYNQHTLASVLSACT-------GLKCLKLGKCVHALV--LKNDGCSNQFVSSGIVD 305
EKG + + T L+AC+ GL+ ++ KC + + +++ GC +VD
Sbjct: 300 EKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGC--------LVD 351
Query: 306 FYCKCGNMRYAESVYAGIGIK-SPFATSSLIAGYSSKG-NMTKAKRLFDSL------SER 357
Y + G + A + + +K + SL+A S+ G N+ A+RL L S
Sbjct: 352 LYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHS 411
Query: 358 NYVVWTALCSGYVKSQQCEAVFKLFREFR 386
NYV+ L + Y + E K+ R+ +
Sbjct: 412 NYVI---LSNMYAADGKWEGASKMRRKMK 437
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/617 (28%), Positives = 287/617 (46%), Gaps = 74/617 (11%)
Query: 56 HRNAFS-WNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 114
HRNA WN+++ Y K L A LFD RD++S N + + ++ L
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETES-GFVLL 144
Query: 115 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 174
RM + G D TLT +L++ K +H+ + + D + LI Y
Sbjct: 145 KRMLGSG---GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYF 201
Query: 175 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 234
KCG VF G + ++ +I
Sbjct: 202 KCGCSVSGRGVFDGMS---------------------------------HRNVITLTAVI 228
Query: 235 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC 294
+G ++N E L LF M + N T S L+AC+G + + G+ +HAL+ K
Sbjct: 229 SGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIE 288
Query: 295 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 354
S + S ++D Y KCG++ A ++ F+S
Sbjct: 289 SELCIESALMDMYSKCGSIEDAWTI-------------------------------FEST 317
Query: 355 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP-DTMIIVNVLGACAIQATLSL 413
+E + V T + G ++ E + F R +A + D ++ VLG I +L L
Sbjct: 318 TEVDEVSMTVILVGLAQNGSEEEAIQFF--IRMLQAGVEIDANVVSAVLGVSFIDNSLGL 375
Query: 414 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 473
GKQ H+ +++ K + + + + L++MYSKCG++ ++ F+ + R+ + +N MIA +
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRM--PKRNYVSWNSMIAAF 433
Query: 474 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 533
A HG A++L++EM + +KP +TF++LL AC H GL++ G + MKE + + P
Sbjct: 434 ARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPR 493
Query: 534 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELL 593
HY C++DM GR L++A F+ +P++ D IW A L AC + +T + + A E+L
Sbjct: 494 TEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLF 553
Query: 594 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 653
+ D+ S ++ +AN+Y++ GKW E + K M+ TK G S I +E+ H F D
Sbjct: 554 QTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVED 613
Query: 654 TSHSKADAIYSTLVCLY 670
H +A+AIY L L+
Sbjct: 614 KLHPQAEAIYDVLSGLF 630
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 198/516 (38%), Gaps = 148/516 (28%)
Query: 10 LVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAY 69
LV H AI SG I N+LI Y G +FD M HRN + A+I
Sbjct: 172 LVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVI--- 228
Query: 70 IKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 129
L ++ H D L LF+ M+ R + + +
Sbjct: 229 ---------SGLIENELHED--------------------GLRLFSLMR--RGLVHPNSV 257
Query: 130 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 189
T + L + + + G+Q+H+ + K + S+L+DMYSKCGS +A+ +F
Sbjct: 258 TYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFEST 317
Query: 190 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 249
V D VS ++ G QNG E A+
Sbjct: 318 TEV---------------------------------DEVSMTVILVGLAQNGSEEEAIQF 344
Query: 250 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 309
FI M++ G+E + + +++VL L LGK +H+LV+K N FV++G+++ Y K
Sbjct: 345 FIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSK 404
Query: 310 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 369
CG++ T ++ +F + +RNYV W ++ + +
Sbjct: 405 CGDL-------------------------------TDSQTVFRRMPKRNYVSWNSMIAAF 433
Query: 370 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG-------KQTHAYIL 422
+ A KL+ E T E + P + +++L AC+ + G K+ H
Sbjct: 434 ARHGHGLAALKLYEEMTTLE-VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEP 492
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
RT + + ++DM + G + A KSF DS
Sbjct: 493 RT------EHYTCIIDMLGRAGLLKEA-KSF---IDS----------------------- 519
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 518
+ LKPD + ALL AC G E+GE
Sbjct: 520 ---------LPLKPDCKIWQALLGACSFHGDTEVGE 546
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 161/383 (42%), Gaps = 63/383 (16%)
Query: 280 LGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 339
LG C+HA ++KN + E V A I + +SL++ Y+
Sbjct: 63 LGPCLHASIIKNP---------------------EFFEPVDADIHRNALVVWNSLLSLYA 101
Query: 340 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 399
G + A +LFD + R+ + + G++++++ E+ F L + + T+ IV
Sbjct: 102 KCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHATLTIV 161
Query: 400 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 459
L C + K HA + + + + + + L+ Y KCG F + S
Sbjct: 162 --LSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGM--S 217
Query: 460 DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 519
R+VI +I+G + ++LF M + + P+++T+++ L+AC + G++
Sbjct: 218 HRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQ 277
Query: 520 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQL----------------------------- 550
++ Y + E+ + ++DMY + +
Sbjct: 278 IH-ALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNG 336
Query: 551 --EKAVEF---MRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 605
E+A++F M + ++IDA + A L I+N+ L KQ ++K + +G+ +V
Sbjct: 337 SEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKF-SGNTFVN 395
Query: 606 --LANVYAAEGKWNEMGRIRKEM 626
L N+Y+ G + + + M
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRM 418
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 42 GLLQEAHKLFDKMPHR-NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAY 100
GL ++ H L K N F N +I Y K +LT ++ +F R+ VS+NSM++A+
Sbjct: 374 GLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAF 433
Query: 101 AGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAND 160
A G AL L+ M + + ++T ++L+ + + ++ G+++ + M +
Sbjct: 434 A-RHGHGLAALKLYEEMTTLE--VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI 490
Query: 161 LSKFA-LSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDM----AL 215
+ + +IDM + G +EA + D A++ AC G ++ A
Sbjct: 491 EPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAE 550
Query: 216 NVFWKNPEFNDTVSWNTLIAG-YVQNG-YMERALTL 249
+F P D+ S + LIA Y G + ERA T+
Sbjct: 551 QLFQTAP---DSSSAHILIANIYSSRGKWKERAKTI 583
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 267/494 (54%), Gaps = 16/494 (3%)
Query: 192 VVDLVSKNAMVAACCRDGKMDMALNVFW---------KNPEFNDTVSWNTLIAGYVQNGY 242
+ D+ + ++A C D + N+ +NP + +N LI +
Sbjct: 41 ISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNP---NLFVFNLLIRCFSTGAE 97
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
+A + +M++ I + T ++ A + ++C+ +G+ H+ +++ ++ +V +
Sbjct: 98 PSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENS 157
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
+V Y CG + A ++ +G + + +S++AGY G + A+ +FD + RN W
Sbjct: 158 LVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTW 217
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
+ + +GY K+ E LF EF E ++ + ++V+V+ +CA L G++ + Y++
Sbjct: 218 SIMINGYAKNNCFEKAIDLF-EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVV 276
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
++ + ++ L +ALVDM+ +CG+I A F+ + ++D + ++ +I G A HG +KA
Sbjct: 277 KSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS--LSWSSIIKGLAVHGHAHKA 334
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 542
+ F +M+ + P +TF A+LSAC H GLVE G + + +MK+D+ + P + HY C+VD
Sbjct: 335 MHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 543 MYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 602
M GR +L +A F+ K+ ++ +A I GA L ACKI NT + ++ L+KV+ ++
Sbjct: 395 MLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGY 454
Query: 603 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSG-DTSHSKADA 661
YV L+N+YA G+W+++ +R M+ K K PG S I ++ I+ FT G D H +
Sbjct: 455 YVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGK 514
Query: 662 IYSTLVCLYGKLYL 675
I + GK+ L
Sbjct: 515 IRRKWEEILGKIRL 528
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 221/487 (45%), Gaps = 25/487 (5%)
Query: 30 TCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQ-ARALFDSASHR 88
+C+ L IHG L H + D + + K NL A +F +
Sbjct: 21 SCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNP 80
Query: 89 DLVSYNSMLSAYA-GADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYG 147
+L +N ++ ++ GA+ + A + +M +R I D IT ++ S+++ V G
Sbjct: 81 NLFVFNLLIRCFSTGAE--PSKAFGFYTQMLKSR--IWPDNITFPFLIKASSEMECVLVG 136
Query: 148 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCR 207
+Q HS +V+ + +SL+ MY+ CG A +F G G D+VS +MVA C+
Sbjct: 137 EQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF-GQMGFRDVVSWTSMVAGYCK 195
Query: 208 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 267
G ++ A +F + P N +W+ +I GY +N E+A+ LF M +G+ N+ + S
Sbjct: 196 CGMVENAREMFDEMPHRN-LFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
V+S+C L L+ G+ + V+K+ N + + +VD + +CG++ A V+ G+
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNY----VVWTALCSGYVKSQQCEAVFKLFR 383
+ SS+I G + G+ KA F + + V +TA+ S E +++
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 384 EFRTTEALIPDTM---IIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMY 440
+ + P IV++LG A + +IL+ + + + AL+
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLA------EAENFILKMHVKPNAPILGALLGAC 428
Query: 441 SKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG-YAHHGFENKAIQLFQEMLKISL--KPD 497
N AE+ ++ + Y V+++ YA G +K I+ ++M+K L KP
Sbjct: 429 KIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDK-IESLRDMMKEKLVKKPP 487
Query: 498 AITFVAL 504
+ + +
Sbjct: 488 GWSLIEI 494
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 157/319 (49%), Gaps = 37/319 (11%)
Query: 10 LVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAY 69
LV + H Q ++ G + ++ N L+H+Y+ G + A ++F +M R+ SW +++ Y
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 70 IKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 129
K + AR +FD HR+L +++ M++ YA + C A+DLF M+ R+ + +E
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYA-KNNCFEKAIDLFEFMK--REGVVANET 250
Query: 130 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 189
+ ++++ A L + +G++ + Y+VK+ ++ ++L+DM+ +CG +A +VF G
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 190 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 249
PE D++SW+++I G +G+ +A+
Sbjct: 311 --------------------------------PE-TDSLSWSSIIKGLAVHGHAHKAMHY 337
Query: 250 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYC 308
F +MI G T +VLSAC+ ++ G ++ + K+ G + G IVD
Sbjct: 338 FSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLG 397
Query: 309 KCGNMRYAESVYAGIGIKS 327
+ G + AE+ + +K
Sbjct: 398 RAGKLAEAENFILKMHVKP 416
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/510 (30%), Positives = 264/510 (51%), Gaps = 46/510 (9%)
Query: 172 MYSKCGSFR-----EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFND 226
++ C + R A V +G + +V + A+ G + A +F + P+ +
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDV 77
Query: 227 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 286
++ N ++ G Q+ E+ ++L+ EM ++G+ +++T VL AC+ L+ G H
Sbjct: 78 SIC-NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHG 136
Query: 287 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTK 346
V+++ N++V + ++ F+ CG++ A ++ A SS+ +GY+ +G + +
Sbjct: 137 KVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDE 196
Query: 347 AKRLFDSL-------------------------------SERNYVVWTALCSGYVKSQQC 375
A RLFD + +E++ V W A+ SGYV
Sbjct: 197 AMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYP 256
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT-----KLNMDE 430
+ +F+E R PD + I+++L ACA+ L GK+ H YIL T + +
Sbjct: 257 KEALGIFKEMRDA-GEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGT 315
Query: 431 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
+ +AL+DMY+KCG+I A + F+ V DRD+ +N +I G A H E +I++F+EM
Sbjct: 316 PIWNALIDMYAKCGSIDRAIEVFRGV--KDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQ 372
Query: 491 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 550
++ + P+ +TF+ ++ AC H G V+ G K+F M++ YN+ P I HY CMVDM GR QL
Sbjct: 373 RLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQL 432
Query: 551 EKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVY 610
E+A F+ + I+ +A +W L ACKI N L K A E+LL + D YV L+N+Y
Sbjct: 433 EEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIY 492
Query: 611 AAEGKWNEMGRIRKEMRGKEATKLPGCSWI 640
A+ G+W+ + ++RK K G S I
Sbjct: 493 ASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 522
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 135/282 (47%), Gaps = 53/282 (18%)
Query: 6 VRDALVVYRDHVQAIKSGLASSIFTCNQLIHL---------YSIHGLLQEAHKLFDKMPH 56
V++AL+++ H G+AS +F + H Y+ G + EA +LFD+MP+
Sbjct: 149 VKNALILF--HANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPY 206
Query: 57 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 116
++ +WN +I +K + AR LFD + +D+V++N+M+S Y G AL +F
Sbjct: 207 KDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNC-GYPKEALGIFKE 265
Query: 117 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL-----SSLID 171
M+ A + D +T+ ++L+ A L + GK++H Y+++TA+ S + ++LID
Sbjct: 266 MRDAGEH--PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALID 323
Query: 172 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWN 231
MY+KCGS A VF G D +WN
Sbjct: 324 MYAKCGSIDRAIEVFRGVKD---------------------------------RDLSTWN 350
Query: 232 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 273
TLI G + + E ++ +F EM + N+ T V+ AC+
Sbjct: 351 TLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACS 391
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 172/591 (29%), Positives = 285/591 (48%), Gaps = 72/591 (12%)
Query: 57 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 116
R+ + NA++ Y+ + AR +FD +RD++S+N+M+S Y +G AL +F
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY-RNGYMNDALMMFDW 208
Query: 117 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL-SSLIDMYSK 175
M +++ +D T+ +ML + L+ + G+ +H +V+ K + ++L++MY K
Sbjct: 209 M--VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK-LVEEKRLGDKIEVKNALVNMYLK 265
Query: 176 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 235
CG +MD A VF E D ++W +I
Sbjct: 266 CG--------------------------------RMDEARFVF-DRMERRDVITWTCMIN 292
Query: 236 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 295
GY ++G +E AL L M +G+ N T+AS++S C + GKC+H ++ S
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS 352
Query: 296 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 355
+ + + ++ Y KC + V++G S + T
Sbjct: 353 DIIIETSLISMYAKCKRVDLCFRVFSG---ASKYHTGP---------------------- 387
Query: 356 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 415
W+A+ +G V+++ LF+ R E + P+ + ++L A A A L
Sbjct: 388 ------WSAIIAGCVQNELVSDALGLFKRMRR-EDVEPNIATLNSLLPAYAALADLRQAM 440
Query: 416 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGY 473
H Y+ +T A+ LV +YSKCG + A K F + + +DV+L+ +I+GY
Sbjct: 441 NIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Query: 474 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 533
HG + A+Q+F EM++ + P+ ITF + L+AC H GLVE G F M E Y L
Sbjct: 501 GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLAR 560
Query: 534 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELL 593
HY C+VD+ GR +L++A + IP + +T+WGA L AC + N L + A +L
Sbjct: 561 SNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLF 620
Query: 594 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVEN 644
++E +N YV LAN+YAA G+W +M ++R M K PG S I + +
Sbjct: 621 ELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 5/245 (2%)
Query: 332 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLF-REFRTTEA 390
S+L Y+ G++T A++LF+ + + + + + + YV+ +F R
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 391 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 450
+PD V A ++ LG H ILR+ D+ + +AL+ MY G + A
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 451 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 510
F ++ +RDVI +N MI+GY +G+ N A+ +F M+ S+ D T V++L C H
Sbjct: 173 DVFDVM--KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGH 230
Query: 511 RGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWG 570
+E+G + E+ + +I +V+MY + ++++A F+ + D W
Sbjct: 231 LKDLEMGRNVH-KLVEEKRLGDKIEVKNALVNMYLKCGRMDEA-RFVFDRMERRDVITWT 288
Query: 571 AFLNA 575
+N
Sbjct: 289 CMING 293
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 188/607 (30%), Positives = 300/607 (49%), Gaps = 86/607 (14%)
Query: 78 ARALFDSASHRD--LVSYNSMLSAYAGADG-CDTVALDLFARMQSARDTIGMDEITLTTM 134
AR LFD RD +S NSM+ AY D+ AL R ++ D T TT+
Sbjct: 29 ARKLFDQRPQRDDSFLS-NSMIKAYLETRQYPDSFALYRDLRKETC---FAPDNFTFTTL 84
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
+ V G Q+HS + +F + DMY G VVD
Sbjct: 85 TKSCSLSMCVYQGLQLHS-------QIWRFGFCA--DMYVSTG--------------VVD 121
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
+ +K GKM A N F + P ++ VSW LI+GY++ G ++ A LF +M
Sbjct: 122 MYAKF---------GKMGCARNAFDEMPHRSE-VSWTALISGYIRCGELDLASKLFDQMP 171
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
V +V+ N ++D + K G+M
Sbjct: 172 H----------------------------VKDVVIYN----------AMMDGFVKSGDMT 193
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 374
A ++ + K+ +++I GY + ++ A++LFD++ ERN V W + GY +++Q
Sbjct: 194 SARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQ 253
Query: 375 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 434
+ +LF+E + T +L PD + I++VL A + LSLG+ H ++ R KL+ K+ +
Sbjct: 254 PQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCT 313
Query: 435 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 494
A++DMYSKCG I A++ F + ++ V +N MI GYA +G A+ LF M+ I
Sbjct: 314 AILDMYSKCGEIEKAKRIFDEM--PEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEE 370
Query: 495 KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 554
KPD IT +A+++AC H GLVE G K+F M+E + +I HY CMVD+ GR L++A
Sbjct: 371 KPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRAGSLKEAE 429
Query: 555 EFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEG 614
+ + +P + + I +FL+AC + ++ ++ +++E N YV L N+YAA+
Sbjct: 430 DLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADK 489
Query: 615 KWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKLY 674
+W++ G ++ MR +A K GCS I + + F SGDT+H +I+ L G L
Sbjct: 490 RWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVL----GDLL 545
Query: 675 LTFTELK 681
+ E K
Sbjct: 546 MHMNEEK 552
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 141/307 (45%), Gaps = 46/307 (14%)
Query: 32 NQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLV 91
N ++ + G + A +LFD+M H+ +W +I Y ++ AR LFD+ R+LV
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 92 SYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMH 151
S+N+M+ Y + + LF MQ A ++ D++T+ ++L + + G+ H
Sbjct: 240 SWNTMIGGYC-QNKQPQEGIRLFQEMQ-ATTSLDPDDVTILSVLPAISDTGALSLGEWCH 297
Query: 152 SYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKM 211
++ + D ++++DMYSKCG +A +F
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFD------------------------ 333
Query: 212 DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE-MIEKGIEYNQHTLASVLS 270
+ PE SWN +I GY NG AL LF+ MIE+ + ++ T+ +V++
Sbjct: 334 --------EMPE-KQVASWNAMIHGYALNGNARAALDLFVTMMIEE--KPDEITMLAVIT 382
Query: 271 ACTGLKCLKLG-KCVHALVLKNDGCSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIKSP 328
AC ++ G K H V++ G + + G +VD + G+++ AE + + P
Sbjct: 383 ACNHGGLVEEGRKWFH--VMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM----P 436
Query: 329 FATSSLI 335
F + +I
Sbjct: 437 FEPNGII 443
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 181/641 (28%), Positives = 311/641 (48%), Gaps = 113/641 (17%)
Query: 31 CNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDL 90
CN L+ +YS G L + ++F+K+ +NA SW A+I +Y R F S + L
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY--------NRGEF---SEKAL 288
Query: 91 VSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQM 150
S++ M+ + I + +TL ++L+ + ++ GK +
Sbjct: 289 RSFSEMI-----------------------KSGIEPNLVTLYSVLSSCGLIGLIREGKSV 325
Query: 151 HSYMVKTANDLSKFALS-SLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDG 209
H + V+ D + +LS +L+++Y++CG S C+ V+ +VS +VA
Sbjct: 326 HGFAVRRELDPNYESLSLALVELYAECGK-------LSDCETVLRVVSDRNIVA------ 372
Query: 210 KMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVL 269
WN+LI+ Y G + +AL LF +M+ + I+ + TLAS +
Sbjct: 373 --------------------WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSI 412
Query: 270 SACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPF 329
SAC + LGK +H V++ D S++FV + ++D Y K G++ A +V+ I +S
Sbjct: 413 SACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVV 471
Query: 330 ATSSLIAGYSSKGNMTKAKRLFD----SLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 385
+S++ G+S GN +A LFD S E N V + A
Sbjct: 472 TWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLA--------------------- 510
Query: 386 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 445
V+ AC+ +L GK H ++ + L D +AL+DMY+KCG+
Sbjct: 511 ---------------VIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGD 554
Query: 446 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 505
+ AE F+ ++ ++ ++ MI Y HG AI F +M++ KP+ + F+ +L
Sbjct: 555 LNAAETVFRAMSSR--SIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVL 612
Query: 506 SACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQID 565
SAC H G VE G+ +F MK + V P H+AC +D+ R L++A ++++P D
Sbjct: 613 SACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLAD 671
Query: 566 ATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKE 625
A++WG+ +N C+I+ ++K + +L + D+ Y L+N+YA EG+W E R+R
Sbjct: 672 ASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSA 731
Query: 626 MRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
M+ K+PG S I ++ + F +G+ + + D IY L
Sbjct: 732 MKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFL 772
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/555 (23%), Positives = 255/555 (45%), Gaps = 80/555 (14%)
Query: 30 TCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRD 89
+C+ L + +H AH L R+ +I +Y + +R +F++ + D
Sbjct: 10 SCSSLRLVSQLH-----AHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPD 64
Query: 90 LVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRV-VCYGK 148
Y ++ D A+DL+ R+ S +T + + ++L A R + G
Sbjct: 65 SFMYGVLIKCNVWCHLLDA-AIDLYHRLVS--ETTQISKFVFPSVLRACAGSREHLSVGG 121
Query: 149 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRD 208
++H ++K D +SL+ MY + G+ +A VF G
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM------------------- 162
Query: 209 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 268
D V+W+TL++ ++NG + +AL +F M++ G+E + T+ SV
Sbjct: 163 --------------PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISV 208
Query: 269 LSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 328
+ C L CL++ + VH + + ++ + + ++ Y KCG++
Sbjct: 209 VEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDL--------------- 253
Query: 329 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 388
++R+F+ ++++N V WTA+ S Y + + E + F E
Sbjct: 254 ----------------LSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM-IK 296
Query: 389 EALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD-EKLASALVDMYSKCGNIA 447
+ P+ + + +VL +C + + GK H + +R +L+ + E L+ ALV++Y++CG ++
Sbjct: 297 SGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLS 356
Query: 448 YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 507
E ++V SDR+++ +N +I+ YAH G +A+ LF++M+ +KPDA T + +SA
Sbjct: 357 DCETVLRVV--SDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 508 CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDAT 567
C + GLV LG++ + +V E + ++DMY + ++ A +I + T
Sbjct: 415 CENAGLVPLGKQIHGHVIRT-DVSDEFVQNS-LIDMYSKSGSVDSASTVFNQIKHRSVVT 472
Query: 568 IWGAFLNACKINNNT 582
W + L N N+
Sbjct: 473 -WNSMLCGFSQNGNS 486
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 200/448 (44%), Gaps = 79/448 (17%)
Query: 14 RDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLF------DKMPHRNAFSWNAIIM 67
R + IKSG+ ++ T ++ + GL++E + + P+ + S A++
Sbjct: 289 RSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL-ALVE 347
Query: 68 AYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMD 127
Y + L+ + S R++V++NS++S YA G AL LF +M + R I D
Sbjct: 348 LYAECGKLSDCETVLRVVSDRNIVAWNSLISLYA-HRGMVIQALGLFRQMVTQR--IKPD 404
Query: 128 EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLS-KFALSSLIDMYSKCGSFREAYNVF 186
TL + ++ +V GKQ+H ++++T D+S +F +SLIDMYSK GS A VF
Sbjct: 405 AFTLASSISACENAGLVPLGKQIHGHVIRT--DVSDEFVQNSLIDMYSKSGSVDSASTVF 462
Query: 187 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 246
+ + V+WN+++ G+ QNG A
Sbjct: 463 N---------------------------------QIKHRSVVTWNSMLCGFSQNGNSVEA 489
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 306
++LF M +E N+ T +V+ AC+ + L+ GK VH ++ + G + F + ++D
Sbjct: 490 ISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS-GLKDLFTDTALIDM 548
Query: 307 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 366
Y KCG++ AE+V+ + +S + SS+I Y G + A F+ + E
Sbjct: 549 YAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVE---------- 598
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 426
P+ ++ +NVL AC ++ GK + +
Sbjct: 599 ----------------------SGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGV 636
Query: 427 NMDEKLASALVDMYSKCGNIAYAEKSFQ 454
+ + + + +D+ S+ G++ A ++ +
Sbjct: 637 SPNSEHFACFIDLLSRSGDLKEAYRTIK 664
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 129/276 (46%), Gaps = 11/276 (3%)
Query: 306 FYCKCGNMRYAESVYAGIGI-----KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 360
+ C ++R ++A + + + P + LI Y+ G+ ++ +F++ +
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 361 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA-IQATLSLGKQTHA 419
++ L V +A L+ +E + +VL ACA + LS+G + H
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRL-VSETTQISKFVFPSVLRACAGSREHLSVGGKVHG 125
Query: 420 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 479
I++ ++ D + ++L+ MY + GN++ AEK F + RD++ ++ +++ +G
Sbjct: 126 RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMP--VRDLVAWSTLVSSCLENGEV 183
Query: 480 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 539
KA+++F+ M+ ++PDA+T ++++ C G + + + L E +
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNS- 242
Query: 540 MVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
++ MY + L + KI + +A W A +++
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIA-KKNAVSWTAMISS 277
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/563 (28%), Positives = 280/563 (49%), Gaps = 73/563 (12%)
Query: 68 AYIKAHNLTQARALFDSAS--HRDLVSYNSMLSAYAGADGC-DTVALDLFARMQSARDTI 124
AYI+++ L A + F+ R+ S+N++LS Y+ + C + L L+ RM+ R
Sbjct: 48 AYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMR--RHCD 105
Query: 125 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 184
G+D L + L ++ G +H +K D + SL++MY++ G+ A
Sbjct: 106 GVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQK 165
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 244
VF ++ +N +V W L+ GY++
Sbjct: 166 VFD------EIPVRN---------------------------SVLWGVLMKGYLKYSKDP 192
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC-SNQFVSSGI 303
LF M + G+ + TL ++ AC + K+GKCVH + ++ + ++ + I
Sbjct: 193 EVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASI 252
Query: 304 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 363
+D Y KC + A++LF++ +RN V+WT
Sbjct: 253 IDMYVKCRLL-------------------------------DNARKLFETSVDRNVVMWT 281
Query: 364 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 423
L SG+ K ++ F LFR+ E+++P+ + +L +C+ +L GK H Y++R
Sbjct: 282 TLISGFAKCERAVEAFDLFRQM-LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIR 340
Query: 424 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 483
+ MD ++ +DMY++CGNI A F ++ + R+VI ++ MI + +G +A+
Sbjct: 341 NGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPE--RNVISWSSMINAFGINGLFEEAL 398
Query: 484 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 543
F +M ++ P+++TFV+LLSAC H G V+ G K F SM DY V+PE HYACMVD+
Sbjct: 399 DCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDL 458
Query: 544 YGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRY 603
GR ++ +A F+ +P++ A+ WGA L+AC+I+ L + E+LL +E + S Y
Sbjct: 459 LGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVY 518
Query: 604 VQLANVYAAEGKWNEMGRIRKEM 626
V L+N+YA G W + +R++M
Sbjct: 519 VLLSNIYADAGMWEMVNCVRRKM 541
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 190/410 (46%), Gaps = 43/410 (10%)
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEF-NDTVSWNTLIAGYVQNGY--MERALTLF 250
++V +++ A + ++D A + F + P + + SWNT+++GY ++ L L+
Sbjct: 38 EVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLY 97
Query: 251 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 310
M + L + AC GL L+ G +H L +KN + +V+ +V+ Y +
Sbjct: 98 NRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQL 157
Query: 311 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 370
G M A+ V FD + RN V+W L GY+
Sbjct: 158 GTMESAQKV-------------------------------FDEIPVRNSVLWGVLMKGYL 186
Query: 371 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY-ILRTKLNMD 429
K + VF+LF R T L D + ++ ++ AC +GK H I R+ ++
Sbjct: 187 KYSKDPEVFRLFCLMRDT-GLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQS 245
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 489
+ L ++++DMY KC + A K F+ T DR+V+++ +I+G+A +A LF++M
Sbjct: 246 DYLQASIIDMYVKCRLLDNARKLFE--TSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Query: 490 LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQ 549
L+ S+ P+ T A+L +C G + G+ M + + + ++ +DMY R
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGN 362
Query: 550 LEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADN 599
++ A +P + + W + +NA IN L ++A + K+++ N
Sbjct: 363 IQMARTVFDMMP-ERNVISWSSMINAFGING---LFEEALDCFHKMKSQN 408
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/538 (22%), Positives = 214/538 (39%), Gaps = 146/538 (27%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H A+K+GL + L+ +Y+ G ++ A K+FD++P RN+ W ++ Y+K
Sbjct: 132 HGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK- 190
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT-IGMDEITLTTM 134
D LF M RDT + +D +TL +
Sbjct: 191 -------------------------------DPEVFRLFCLM---RDTGLALDALTLICL 216
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTAN-DLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
+ + GK +H ++ + D S + +S+IDMY KC A +F + V
Sbjct: 217 VKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF---ETSV 273
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
D + V W TLI+G+ + A LF +M
Sbjct: 274 D------------------------------RNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
+ + I NQ TLA++L +C+ L L+ GK VH +++N + + +D Y +CGN+
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI 363
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
+ A +V FD + ERN + W+++ + + +
Sbjct: 364 QMARTV-------------------------------FDMMPERNVISWSSMINAFGING 392
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG-KQTHAYILRTKLNMDEKL 432
E F + + ++ ++P+++ V++L AC+ + G KQ + + +E+
Sbjct: 393 LFEEALDCFHKMK-SQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEH 451
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
+ +VD+ + G I A KSF + +
Sbjct: 452 YACMVDLLGRAGEIGEA-KSF-----------------------------------IDNM 475
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKF---FMSMKED----YNVLPEIYHYACMVDM 543
+KP A + ALLSACR V+L + +SM+ + Y +L IY A M +M
Sbjct: 476 PVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEM 533
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 179/626 (28%), Positives = 290/626 (46%), Gaps = 108/626 (17%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H A+K+GLASS F + + YS G EA+ F ++ + FSW +II + ++ ++
Sbjct: 253 HGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDM 312
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGM--DEITLTT 133
++ D+F MQ+ GM D + ++
Sbjct: 313 EES--------------------------------FDMFWEMQNK----GMHPDGVVISC 336
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
++N K+ +V GK H ++++ L +SL+ MY
Sbjct: 337 LINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMY-------------------- 376
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
C+ + +A +F + E + +WNT++ GY + + + LF ++
Sbjct: 377 ------------CKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 424
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
GIE + + SV+S+C+ + + LGK +H V+K +D N
Sbjct: 425 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTS-----------LDLTISVVN- 472
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
SLI Y G++T A R+F ++ N + W A+ + YV +
Sbjct: 473 -------------------SLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCE 512
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
Q E LF +E P ++ +V +L AC +L G+ H YI T+ M+ L+
Sbjct: 513 QSEKAIALFDRM-VSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLS 571
Query: 434 SALVDMYSKCGNIAYAEKSFQLV-TDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
+AL+DMY+KCG++ EKS +L + +D + +NVMI+GY HG AI LF +M +
Sbjct: 572 AALIDMYAKCGHL---EKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEES 628
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
+KP TF+ALLSAC H GLVE G+K F+ M + Y+V P + HY+C+VD+ R LE+
Sbjct: 629 DVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEE 687
Query: 553 AVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 612
A + +P D IWG L++C + + + E + + N Y+ LAN+Y+A
Sbjct: 688 AESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSA 747
Query: 613 EGKWNEMGRIRKEMRGKEATKLPGCS 638
GKW E R R+ MR K G S
Sbjct: 748 AGKWEEAERAREMMRESGVGKRAGHS 773
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 124/539 (23%), Positives = 227/539 (42%), Gaps = 107/539 (19%)
Query: 20 IKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQAR 79
I GL+ +IF ++LI Y+ +G + ++F + R+ F WN+II A+ + ++
Sbjct: 51 ITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSL 110
Query: 80 ALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSA 139
F F+ + S + D T +++ A
Sbjct: 111 CFF-------------------------------FSMLLSGQSP---DHFTAPMVVSACA 136
Query: 140 KLRVVCYGKQMHSYMVKTAN-DLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSK 198
+L G +H ++K D + +S + YSKCG ++A VF D + D
Sbjct: 137 ELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVF---DEMPD---- 189
Query: 199 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 258
D V+W +I+G+VQNG E L +M G
Sbjct: 190 --------------------------RDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGS 223
Query: 259 EY---NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+ N TL AC+ L LK G+C+H +KN S++FV S + FY K GN
Sbjct: 224 DVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSE 283
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
A + +G + F+ +S+IA + G+M
Sbjct: 284 AYLSFRELGDEDMFSWTSIIASLARSGDM------------------------------- 312
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
E F +F E + + + PD ++I ++ + GK H +++R ++D + ++
Sbjct: 313 EESFDMFWEMQ-NKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNS 371
Query: 436 LVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
L+ MY K ++ AEK F +++ + + +N M+ GY K I+LF+++ + ++
Sbjct: 372 LLSMYCKFELLSVAEKLFCRISE-EGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIE 430
Query: 496 PDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
D+ + +++S+C H G V LG+ +K ++ + + ++D+YG+ L A
Sbjct: 431 IDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVN--SLIDLYGKMGDLTVA 487
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 268/530 (50%), Gaps = 38/530 (7%)
Query: 148 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCR 207
KQ+H ++++ D S + L+ LI +K G + Y V++ V
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPY-----ARRVIEPV----------- 109
Query: 208 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 267
+F + W +I GY G + A+ ++ M ++ I T ++
Sbjct: 110 ---------------QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSA 154
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
+L AC +K L LG+ HA + G +V + ++D Y KC ++ A V+ + +
Sbjct: 155 LLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERD 214
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 387
+ + LIA Y+ GNM A LF+SL ++ V WTA+ +G+ ++ + + + F
Sbjct: 215 VISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEK 274
Query: 388 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK--LASALVDMYSKCGN 445
+ + D + + + ACA + ++ + + + SAL+DMYSKCGN
Sbjct: 275 S-GIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 446 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML-KISLKPDAITFVAL 504
+ A F ++ ++++V Y+ MI G A HG +A+ LF M+ + +KP+ +TFV
Sbjct: 334 VEEAVNVF--MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGA 391
Query: 505 LSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQI 564
L AC H GLV+ G + F SM + + V P HY CMVD+ GR +L++A+E ++ + ++
Sbjct: 392 LMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEP 451
Query: 565 DATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRK 624
+WGA L AC+I+NN + + A E L ++E D Y+ L+NVYA+ G W + R+RK
Sbjct: 452 HGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRK 511
Query: 625 EMRGKEATKLPGCSWIYVENG-IHVFTSGDTSHSKADAIYSTLVCLYGKL 673
++ K K P SW+ +NG +H F G+ +H ++ I L L +L
Sbjct: 512 LIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERL 561
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/507 (23%), Positives = 193/507 (38%), Gaps = 106/507 (20%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQE--AHKLFDKMPHRNAFSWNAIIMAYIKAH 73
H ++ GL S + +LI + G+ + A ++ + + RN F W A+I Y
Sbjct: 69 HGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEG 128
Query: 74 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
+A A++ GC ++ I T +
Sbjct: 129 KFDEAIAMY----------------------GC------------MRKEEITPVSFTFSA 154
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
+L ++ + G+Q H+ + + +++IDMY KC S A VF
Sbjct: 155 LLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPE-R 213
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
D++S ++AA R G M+ A +F P D V+W ++ G+ QN + AL F M
Sbjct: 214 DVISWTELIAAYARVGNMECAAELFESLPT-KDMVAWTAMVTGFAQNAKPQEALEYFDRM 272
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV--SSGIVDFYCKCG 311
+ GI ++ T+A +SAC L K + K+ + V S ++D Y KCG
Sbjct: 273 EKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCG 332
Query: 312 NMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK 371
N+ A +V+ + K+ F SS+I G ++ G +A LF +Y+V
Sbjct: 333 NVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLF------HYMV---------- 376
Query: 372 SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK 431
T + P+T+ V L AC+ + G+Q
Sbjct: 377 ---------------TQTEIKPNTVTFVGALMACSHSGLVDQGRQV-------------- 407
Query: 432 LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 491
MY G RD Y M+ G +A++L + M
Sbjct: 408 ----FDSMYQTFG------------VQPTRD--HYTCMVDLLGRTGRLQEALELIKTM-- 447
Query: 492 ISLKPDAITFVALLSACRHRGLVELGE 518
S++P + ALL ACR E+ E
Sbjct: 448 -SVEPHGGVWGALLGACRIHNNPEIAE 473
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 248/467 (53%), Gaps = 52/467 (11%)
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS---------WNTLIAGYVQNGYMER 245
L+SK + + CR ++D+A +F D V+ W + GY +NG
Sbjct: 169 LLSKLITLFSVCR--RLDLARKIF-------DDVTDSSLLTEKVWAAMAIGYSRNGSPRD 219
Query: 246 ALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 305
AL ++++M+ IE +++ L AC LK L++G+ +HA ++K +Q V + ++
Sbjct: 220 ALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLK 279
Query: 306 FYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTAL 365
Y + G A+++FD +SERN V W +L
Sbjct: 280 LYME-------------------------------SGLFDDARKVFDGMSERNVVTWNSL 308
Query: 366 CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 425
S K + +F LFR+ + E + + +L AC+ A L GK+ HA IL++K
Sbjct: 309 ISVLSKKVRVHEMFNLFRKMQE-EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSK 367
Query: 426 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 485
D L ++L+DMY KCG + Y+ + F ++ +D+ +N+M+ YA +G + I L
Sbjct: 368 EKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLT--KDLASWNIMLNCYAINGNIEEVINL 425
Query: 486 FQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 545
F+ M++ + PD ITFVALLS C GL E G F MK ++ V P + HYAC+VD+ G
Sbjct: 426 FEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILG 485
Query: 546 RGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 605
R ++++AV+ + +P + A+IWG+ LN+C+++ N ++ + A +EL +E N YV
Sbjct: 486 RAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVM 545
Query: 606 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSG 652
++N+YA W+ + +IR+ M+ + K GCSW+ V++ I +F +G
Sbjct: 546 VSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 130/275 (47%), Gaps = 45/275 (16%)
Query: 7 RDALVVYRDHVQA-IKSG---LASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSW 62
RDAL+VY D + + I+ G ++ ++ C L L G+ + K +K+ + +
Sbjct: 218 RDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKV---DQVVY 274
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N ++ Y+++ AR +FD S R++V++NS++S + + +LF +MQ +
Sbjct: 275 NVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEM-FNLFRKMQ--EE 331
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
IG TLTT+L +++ + GK++H+ ++K+ L+SL+DMY KCG +
Sbjct: 332 MIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYS 391
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
VF D+ L D SWN ++ Y NG
Sbjct: 392 RRVF-------------------------DVMLT--------KDLASWNIMLNCYAINGN 418
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSAC--TGL 275
+E + LF MIE G+ + T ++LS C TGL
Sbjct: 419 IEEVINLFEWMIESGVAPDGITFVALLSGCSDTGL 453
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 107/545 (19%), Positives = 208/545 (38%), Gaps = 150/545 (27%)
Query: 32 NQLIHLYSIHGLLQEAHKLFDKMPHRNAFS---WNAIIMAYIKAHNLTQARALFDSASHR 88
++LI L+S+ L A K+FD + + + W A+ + Y + + S R
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSR------------NGSPR 218
Query: 89 D-LVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYG 147
D L+ Y ML ++ I +++ L L+ + G
Sbjct: 219 DALIVYVDMLCSF-----------------------IEPGNFSISVALKACVDLKDLRVG 255
Query: 148 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCR 207
+ +H+ +VK + + + L+ +Y + G F +A VF G
Sbjct: 256 RGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSE---------------- 299
Query: 208 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 267
+ V+WN+LI+ + + LF +M E+ I ++ TL +
Sbjct: 300 -----------------RNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTT 342
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
+L AC+ + L GK +HA +LK+ + + + ++D Y KCG + Y
Sbjct: 343 ILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEY------------ 390
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 387
++R+FD + ++ W + + Y + E V LF E+
Sbjct: 391 -------------------SRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLF-EWMI 430
Query: 388 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA--SALVDMYSKCGN 445
+ PD + V +L C+ G ++T+ + L + LVD+ + G
Sbjct: 431 ESGVAPDGITFVALLSGCSDTGLTEYGLSLFER-MKTEFRVSPALEHYACLVDILGRAGK 489
Query: 446 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 505
I +A+++ + M KP A + +LL
Sbjct: 490 I---------------------------------KEAVKVIETM---PFKPSASIWGSLL 513
Query: 506 SACRHRGLVELGEKFFMSMKEDYNVLPE-IYHYACMVDMYGRG---NQLEKAVEFMRKIP 561
++CR G V +GE ++ KE + + P +Y + ++Y + ++K E M++
Sbjct: 514 NSCRLHGNVSVGE---IAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRG 570
Query: 562 IQIDA 566
++ +A
Sbjct: 571 VKKEA 575
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 139/312 (44%), Gaps = 32/312 (10%)
Query: 316 AESVYAGIGIKS-----------PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV---V 361
A+S++ GI I S P S LI +S + A+++FD +++ + + V
Sbjct: 144 AKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKV 203
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
W A+ GY ++ ++ + + + P I L AC L +G+ HA I
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCS-FIEPGNFSISVALKACVDLKDLRVGRGIHAQI 262
Query: 422 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 481
++ K +D+ + + L+ +Y + G A K F + S+R+V+ +N +I+ + ++
Sbjct: 263 VKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGM--SERNVVTWNSLISVLSKKVRVHE 320
Query: 482 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF---FMSMKEDYNVLPEIYHYA 538
LF++M + + T +L AC + G++ + KE P++
Sbjct: 321 MFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEK----PDVPLLN 376
Query: 539 CMVDMYGRGNQLEKAVEFMRK---IPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKV 595
++DMYG+ + VE+ R+ + + D W LN IN N V E +++
Sbjct: 377 SLMDMYGKCGE----VEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIES 432
Query: 596 E-ADNGSRYVQL 606
A +G +V L
Sbjct: 433 GVAPDGITFVAL 444
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/541 (27%), Positives = 262/541 (48%), Gaps = 67/541 (12%)
Query: 127 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 186
D + +L A L + G+Q+H ++ K + F L++LI MY KCG +A VF
Sbjct: 52 DAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVF 111
Query: 187 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFND-TVSWNTLIAGYVQNGYMER 245
+NP+ + +V +N LI+GY N +
Sbjct: 112 E--------------------------------ENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 246 ALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 305
A +F M E G+ + T+ ++ CT + L LG+ +H +K S V + +
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 306 FYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTAL 365
Y KCG SV AG +RLFD + + + W A+
Sbjct: 200 MYMKCG------SVEAG-------------------------RRLFDEMPVKGLITWNAV 228
Query: 366 CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 425
SGY ++ V +L+ + +++ + PD +V+VL +CA +G + +
Sbjct: 229 ISGYSQNGLAYDVLELYEQMKSS-GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNG 287
Query: 426 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 485
+ +++A + MY++CGN+A A F ++ + ++ + MI Y HG + L
Sbjct: 288 FVPNVFVSNASISMYARCGNLAKARAVFDIMPV--KSLVSWTAMIGCYGMHGMGEIGLML 345
Query: 486 FQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 545
F +M+K ++PD FV +LSAC H GL + G + F +MK +Y + P HY+C+VD+ G
Sbjct: 346 FDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLG 405
Query: 546 RGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 605
R +L++A+EF+ +P++ D +WGA L ACKI+ N + + A ++++ E +N YV
Sbjct: 406 RAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVL 465
Query: 606 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYST 665
++N+Y+ + RIR MR + K PG S++ + +H+F +GD SH + + ++
Sbjct: 466 MSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRM 525
Query: 666 L 666
L
Sbjct: 526 L 526
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 123/531 (23%), Positives = 199/531 (37%), Gaps = 138/531 (25%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H K G + F LI +Y GL+ +A K+F++ P + S
Sbjct: 76 HCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLS-------------- 121
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
V YN+++S Y A+ T A +F RM+ + +D +T+ ++
Sbjct: 122 ---------------VCYNALISGYT-ANSKVTDAAYMFRRMKET--GVSVDSVTMLGLV 163
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
L + G+ +H VK D L+S I MY KCGS +F
Sbjct: 164 PLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFD-------- 215
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+M + ++WN +I+GY QNG L L+ +M
Sbjct: 216 ----------------EMPVK---------GLITWNAVISGYSQNGLAYDVLELYEQMKS 250
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
G+ + TL SVLS+C L K+G V LV N N FVS+ + Y +CGN+
Sbjct: 251 SGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAK 310
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
A +V+ + +KS + +++I Y G LFD + +R
Sbjct: 311 ARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR------------------ 352
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT-KLNMDEKLAS 434
+ PD + V VL AC+ G + + R KL + S
Sbjct: 353 --------------GIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYS 398
Query: 435 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 494
LVD+ + G + ++A++ + M +
Sbjct: 399 CLVDLLGRAGRL---------------------------------DEAMEFIESM---PV 422
Query: 495 KPDAITFVALLSACRHRGLVELGEKFFMSMKE-DYNVLPEIYHYACMVDMY 544
+PD + ALL AC+ V++ E F + E + N I +Y M ++Y
Sbjct: 423 EPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPN---NIGYYVLMSNIY 470
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 146/339 (43%), Gaps = 37/339 (10%)
Query: 227 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 286
+ WN + +++L+ M+ G + + +L +C L G+ +H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 287 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT--SSLIAGYSSKGNM 344
V K + FV + ++ YCKCG + A V+ S + ++LI+GY++ +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 345 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 404
T A +F + E V D++ ++ ++
Sbjct: 138 TDAAYMFRRMKETGVSV--------------------------------DSVTMLGLVPL 165
Query: 405 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 464
C + L LG+ H ++ L+ + + ++ + MY KCG++ + F + + +I
Sbjct: 166 CTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMP--VKGLI 223
Query: 465 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 524
+N +I+GY+ +G ++L+++M + PD T V++LS+C H G ++G + +
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE-VGKL 282
Query: 525 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQ 563
E +P ++ + MY R L KA +P++
Sbjct: 283 VESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK 321
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 269/534 (50%), Gaps = 37/534 (6%)
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
L L A+ R + K +H+++VK ++L+++Y KCG+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGA---------------- 53
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
AL VF + P D ++W +++ Q + L++F +
Sbjct: 54 ----------------ASHALQVFDEMPH-RDHIAWASVLTALNQANLSGKTLSVFSSVG 96
Query: 255 EKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
+ + ++++ AC L + G+ VH + ++ +++ V S +VD Y KCG +
Sbjct: 97 SSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLL 156
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
A++V+ I +K+ + +++++GY+ G +A LF L +N WTAL SG+V+S
Sbjct: 157 NSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSG 216
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
+ F +F E R I D +++ +++GACA A G+Q H ++ + ++
Sbjct: 217 KGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFIS 276
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
+AL+DMY+KC ++ A+ F + RDV+ + +I G A HG KA+ L+ +M+
Sbjct: 277 NALIDMYAKCSDVIAAKDIFSRM--RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG 334
Query: 494 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
+KP+ +TFV L+ AC H G VE G + F SM +DY + P + HY C++D+ GR L++A
Sbjct: 335 VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 394
Query: 554 VEFMRKIPIQIDATIWGAFLNACKINNNTTL-VKQAEEELLKVEADNGSRYVQLANVYAA 612
+ +P D W A L+ACK + ++ A+ + + + S Y+ L+N+YA+
Sbjct: 395 ENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYAS 454
Query: 613 EGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
W ++ R+++ E K PG S + V VF +G+TSH + I+ L
Sbjct: 455 ASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLL 508
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 230/553 (41%), Gaps = 118/553 (21%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +K G+ N L+++Y G A ++FD+MPHR+ +W +++ A L
Sbjct: 26 HAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA------L 79
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
QA + S + L ++S+ S+ + D+ + ++
Sbjct: 80 NQA-----NLSGKTLSVFSSVGSSS----------------------GLRPDDFVFSALV 112
Query: 136 NLSAKLRVVCYGKQMHSYMVKT--ANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
A L + +G+Q+H + + + AND + SSL+DMY+KCG A VF V
Sbjct: 113 KACANLGSIDHGRQVHCHFIVSEYAND--EVVKSSLVDMYAKCGLLNSAKAVFDSIR-VK 169
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
+ +S AMV+ + G+ + AL +F P + SW LI+G+VQ+G A ++F EM
Sbjct: 170 NTISWTAMVSGYAKSGRKEEALELFRILP-VKNLYSWTALISGFVQSGKGLEAFSVFTEM 228
Query: 254 IEKGIE-YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
+ ++ + L+S++ AC L G+ VH LV+ S F+S+ ++D Y KC +
Sbjct: 229 RRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSD 288
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
+ A+ +++ + + + +SLI G + G KA L+D +
Sbjct: 289 VIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM------------------ 330
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ-----THAYILRTKLN 427
+ + P+ + V ++ AC+ + G++ T Y +R L
Sbjct: 331 --------------VSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQ 376
Query: 428 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
+ L+D+ + G + AE L
Sbjct: 377 H----YTCLLDLLGRSGLLDEAE---------------------------------NLIH 399
Query: 488 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRG 547
M PD T+ ALLSAC+ +G ++G + + + L + Y + ++Y
Sbjct: 400 TM---PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFK-LKDPSTYILLSNIYASA 455
Query: 548 NQLEKAVEFMRKI 560
+ K E RK+
Sbjct: 456 SLWGKVSEARRKL 468
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 169/681 (24%), Positives = 316/681 (46%), Gaps = 103/681 (15%)
Query: 6 VRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQE-AHKLFDKMPHRNAFSWNA 64
V D + R H A+K+GL +IF N L+ +Y+ G + + ++F+ + N S+ A
Sbjct: 151 VLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTA 210
Query: 65 IIMAYIKAHNLTQARALF----DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSA 120
+I + + + +A +F + D V +++LS A +GCD+++
Sbjct: 211 VIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS---------- 260
Query: 121 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 180
EI + GKQ+H ++ +SL+++Y+K
Sbjct: 261 -------EIYGNEL------------GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMN 301
Query: 181 EAYNVFSGCDGVVDLVSKNAMV-----------------------------------AAC 205
A +F+ V ++VS N M+ AC
Sbjct: 302 GAELIFAEMPEV-NVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC 360
Query: 206 CRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTL 265
R G ++ +F P+ +WN +++GY + E A++ F +M + ++ ++ TL
Sbjct: 361 FRSGDVETGRRIFSSIPQ-PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTL 419
Query: 266 ASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGI 325
+ +LS+C L+ L+ GK +H +V++ + N + SG++ Y +C M +E ++
Sbjct: 420 SVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFD---- 475
Query: 326 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 385
D ++E + W ++ SG+ + LFR
Sbjct: 476 --------------------------DCINELDIACWNSMISGFRHNMLDTKALILFRRM 509
Query: 386 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 445
T L P+ VL +C+ +L G+Q H ++++ D + +AL DMY KCG
Sbjct: 510 HQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGE 569
Query: 446 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 505
I A + F V ++ +++N MI GY H+G ++A+ L+++M+ KPD ITFV++L
Sbjct: 570 IDSARQFFDAVLR--KNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVL 627
Query: 506 SACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQID 565
+AC H GLVE G + SM+ + + PE+ HY C+VD GR +LE A + P +
Sbjct: 628 TACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSS 687
Query: 566 ATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKE 625
+ +W L++C+++ + +L ++ E+L++++ + + YV L+N Y++ +W++ ++
Sbjct: 688 SVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGL 747
Query: 626 MRGKEATKLPGCSWIYVENGI 646
M K PG SW N +
Sbjct: 748 MNKNRVHKTPGQSWTTYGNDL 768
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/606 (24%), Positives = 279/606 (46%), Gaps = 86/606 (14%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H ++ G+ S + CN+L+ LY G A K+FD+M R+ +SWNA + K +L
Sbjct: 29 HGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDL 88
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+A +FD RD+VS+N+M+S G + AL ++ RM D TL ++L
Sbjct: 89 GEACEVFDGMPERDVVSWNNMISVLV-RKGFEEKALVVYKRMVC--DGFLPSRFTLASVL 145
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ +K+ +G + H VKT D + F ++L+ MY+KCG
Sbjct: 146 SACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI---------------- 189
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+D + VF + N+ VS+ +I G + + A+ +F M E
Sbjct: 190 ---------------VDYGVRVFESLSQPNE-VSYTAVIGGLARENKVLEAVQMFRLMCE 233
Query: 256 KGIEYNQHTLASVLS------ACTGLKCL---KLGKCVHALVLKNDGCSNQFVSSGIVDF 306
KG++ + L+++LS C L + +LGK +H L L+ + +++ +++
Sbjct: 234 KGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEI 293
Query: 307 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSK------------------------- 341
Y K +M AE ++A + + + + +I G+ +
Sbjct: 294 YAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTC 353
Query: 342 ----------GNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 391
G++ +R+F S+ + + W A+ SGY + E FR+ + + L
Sbjct: 354 ISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ-FQNL 412
Query: 392 IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 451
PD + +L +CA L GKQ H ++RT+++ + + S L+ +YS+C + +E
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 452 SFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS-LKPDAITFVALLSACRH 510
F + + D+ +N MI+G+ H+ + KA+ LF+ M + + L P+ +F +LS+C
Sbjct: 473 IFDDCIN-ELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Query: 511 RGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIW 569
+ G +F + +K Y + + + + DMY + +++ A +F + ++ + IW
Sbjct: 532 LCSLLHGRQFHGLVVKSGY--VSDSFVETALTDMYCKCGEIDSARQFFDAV-LRKNTVIW 588
Query: 570 GAFLNA 575
++
Sbjct: 589 NEMIHG 594
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 209/458 (45%), Gaps = 52/458 (11%)
Query: 131 LTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCD 190
L ++L R GK +H ++V+ + + L+D+Y +CG A VF
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 191 GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 250
V D+ S NA + C+ G + A VF PE D VSWN +I+ V+ G+ E+AL ++
Sbjct: 69 -VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPE-RDVVSWNNMISVLVRKGFEEKALVVY 126
Query: 251 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 310
M+ G ++ TLASVLSAC+ + G H + +K N FV + ++ Y KC
Sbjct: 127 KRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKC 186
Query: 311 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 370
G I Y R+F+SLS+ N V +TA+ G
Sbjct: 187 G----------------------FIVDY--------GVRVFESLSQPNEVSYTAVIGGLA 216
Query: 371 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA---TLS------LGKQTHAYI 421
+ + ++FR + + D++ + N+L A + +LS LGKQ H
Sbjct: 217 RENKVLEAVQMFR-LMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLA 275
Query: 422 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 481
LR D L ++L+++Y+K ++ AE F + + +V+ +N+MI G+ +K
Sbjct: 276 LRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEV--NVVSWNIMIVGFGQEYRSDK 333
Query: 482 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 541
+++ M +P+ +T +++L AC G VE G + F S+ + P + + M+
Sbjct: 334 SVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAML 388
Query: 542 DMYGRGNQLEKAVEFMRKIPIQ---IDATIWGAFLNAC 576
Y E+A+ R++ Q D T L++C
Sbjct: 389 SGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 242/463 (52%), Gaps = 33/463 (7%)
Query: 222 PEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY-NQHTLASVLSACTGLKCLKL 280
PE D +NTL+ GY ++ ++ +F+EM+ KG + + + A V+ A + L+
Sbjct: 66 PE-PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 281 GKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSS 340
G +H LK+ S+ FV + ++ Y CG + +A V+ + + A +++I
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 341 KGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE---------------- 384
++ A+ +FD + RN+ W + +GY+K+ + E+ ++F E
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 385 ------------FRTTE--ALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 430
FR + + P+ + + VL AC+ + GK H ++ + +
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 431 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
+ +AL+DMYS+CGN+ A F+ + + R ++ + MIAG A HG +A++LF EM
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEK-RCIVSWTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 491 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 550
+ PD I+F++LL AC H GL+E GE +F MK Y++ PEI HY CMVD+YGR +L
Sbjct: 364 AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 551 EKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVY 610
+KA +F+ ++PI A +W L AC + N L +Q ++ L +++ +N V L+N Y
Sbjct: 424 QKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAY 483
Query: 611 AAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 653
A GKW ++ IRK M + K S + V ++ FT+G+
Sbjct: 484 ATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGE 526
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 121/530 (22%), Positives = 200/530 (37%), Gaps = 109/530 (20%)
Query: 30 TCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHN-LTQARALFDSASHR 88
+C L L IHGL + D + F+ I+ I + L AR L
Sbjct: 14 SCKNLRALTQIHGLFIKYGVDTD-----SYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 89 DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGK 148
D +N+++ Y+ +D ++ +F M + + D + ++ R + G
Sbjct: 69 DAFMFNTLVRGYSESDEPHN-SVAVFVEMMR-KGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 149 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRD 208
QMH +K + F ++LI MY CG A VF +LV+ NA++ AC R
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ-PNLVAWNAVITACFRG 185
Query: 209 -------------------------------GKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
G+++ A +F + P D VSW+T+I G
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPH-RDDVSWSTMIVGI 244
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 297
NG + F E+ G+ N+ +L VLSAC+ + GK +H V K
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 298 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSE 356
V++ ++D Y +CGN+ A V+ G+ K + +S+IAG + G +A RLF+ +
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM-- 362
Query: 357 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 416
T + PD + +++L AC+ + G+
Sbjct: 363 ------------------------------TAYGVTPDGISFISLLHACSHAGLIEEGE- 391
Query: 417 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 476
D +S+ + + E + Y M+ Y
Sbjct: 392 ---------------------DYFSEMKRVYHIEPEIE----------HYGCMVDLYGRS 420
Query: 477 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 526
G KA +M + P AI + LL AC G +EL E+ + E
Sbjct: 421 GKLQKAYDFICQM---PIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNE 467
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 165/375 (44%), Gaps = 64/375 (17%)
Query: 13 YRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKA 72
++ H QA+K GL S +F LI +Y G ++ A K+FD+M N +WNA+I A +
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 73 HNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT------IGM 126
+++ AR +FD R+ S+N ML+ Y A ++ A +F+ M D +G+
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELES-AKRIFSEMPHRDDVSWSTMIVGI 244
Query: 127 -----------------------DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK 163
+E++LT +L+ ++ +GK +H ++ K
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 164 FALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE 223
++LIDMYS+CG+ A VF G + K +V+
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEG------MQEKRCIVS-------------------- 338
Query: 224 FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKC 283
W ++IAG +G E A+ LF EM G+ + + S+L AC+ ++ G+
Sbjct: 339 ------WTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGED 392
Query: 284 VHALVLKNDGCSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGI-KSPFATSSLIAGYSSK 341
+ + + + G +VD Y + G ++ A + I + +L+ SS
Sbjct: 393 YFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSH 452
Query: 342 GNMTKAKRLFDSLSE 356
GN+ A+++ L+E
Sbjct: 453 GNIELAEQVKQRLNE 467
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 192/673 (28%), Positives = 325/673 (48%), Gaps = 79/673 (11%)
Query: 27 SIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIK-------AHNLTQAR 79
S + N LI +Y G L++A K+FDKMPHRN S+NA+ AY + A LT
Sbjct: 131 SPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHM 190
Query: 80 AL----FDSASHRDLV-------------SYNSMLSAYAGADGC--DTVALDLFAR---M 117
A +S++ LV S NS + +D T L +++ +
Sbjct: 191 AFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDL 250
Query: 118 QSARDTI----GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 173
+SAR D + TM+ S K + G M+ + D ++F S +++
Sbjct: 251 ESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGC 310
Query: 174 SKCGSFREAYNVFSG---CDGVVDLVSKNAMVAACCRDGKMDMALNVFWK--NPEFNDTV 228
SK GS+ + + D + DL NA++ C G M A VF + NP + V
Sbjct: 311 SKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNP---NLV 367
Query: 229 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEY-NQHTLASVLSACTGLKCLKLGKCVHAL 287
SWN++I+G +NG+ E+A+ ++ ++ +++T ++ +SA + GK +H
Sbjct: 368 SWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQ 427
Query: 288 VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKA 347
V K + Y SV+ G ++L++ Y A
Sbjct: 428 VTK----------------------LGYERSVFVG---------TTLLSMYFKNREAESA 456
Query: 348 KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAI 407
+++FD + ER+ V+WT + G+ + E + F E E D + +V+GAC+
Sbjct: 457 QKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM-YREKNRSDGFSLSSVIGACSD 515
Query: 408 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 467
A L G+ H +RT + + ALVDMY K G AE F L S+ D+ +N
Sbjct: 516 MAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLA--SNPDLKCWN 573
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 527
M+ Y+ HG KA+ F+++L+ PDA+T+++LL+AC HRG G+ + MKE
Sbjct: 574 SMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ 633
Query: 528 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPI-QIDATIWGAFLNACKINNNTTLVK 586
+ HY+CMV++ + +++A+E + + P A +W L+AC N +
Sbjct: 634 -GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGL 692
Query: 587 QAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYV-ENG 645
A E++LK++ ++ + ++ L+N+YA G+W ++ +R+++RG ++K PG SWI V N
Sbjct: 693 YAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNN 752
Query: 646 IHVFTSGDTSHSK 658
VF+SGD S+ +
Sbjct: 753 TQVFSSGDQSNPE 765
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 167/365 (45%), Gaps = 27/365 (7%)
Query: 231 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK 290
N LI+ YV+ +E+A +F +M ++ I ++ + + +G +H+ ++K
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNI-------VTLFGLSAVFEYVSMGSSLHSQIIK 78
Query: 291 NDGCSNQF------VSSGIVDFYCKCGN---MRYAESVYA-------GIGIKSPFATSSL 334
F ++S +V+ KC + ++ A ++A G +SP+A ++L
Sbjct: 79 LGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNL 138
Query: 335 IAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPD 394
I+ Y G++ +A+++FD + RN V + AL S Y ++ + E + P+
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPN 198
Query: 395 TMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQ 454
+ +++ CA+ + +G ++ I++ + + + ++++ MYS CG++ A + F
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
Query: 455 LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLV 514
V ++RD + +N MI G + + F+ ML + P T+ +L+ C G
Sbjct: 259 CV--NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 515 ELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLN 574
LG K + + L ++ ++DMY + +A +I + W + ++
Sbjct: 317 SLG-KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIIS 374
Query: 575 ACKIN 579
C N
Sbjct: 375 GCSEN 379
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 387
P+A ++LI+ Y ++ +A+++FD + +RN V L + + ++ + +
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 388 TEAL--IPDTMI---IVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA---LVDM 439
+ + +P I +V + C L +Q HA +L + A L+ M
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 440 YSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG-FENKAIQLFQEMLKISLKPDA 498
Y +CG++ A K F + R+V+ YN + + Y+ + F + A L M +KP++
Sbjct: 142 YVRCGSLEQARKVFDKMP--HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 499 ITFVALLSAC 508
TF +L+ C
Sbjct: 200 STFTSLVQVC 209
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 258/478 (53%), Gaps = 16/478 (3%)
Query: 199 NAMVAACCRDGKMDMALNVFWKNP-EFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG 257
NA+ G+M A +F + P D V W TL++ + + G + ++ LF+EM K
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 258 IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 317
+E + ++ + C L+ L + H + +K ++ V + ++D Y KCG + +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 318 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 377
++ + KS + + ++ + + + +F + ERN V WT + +GY+ +
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 378 VFKLFRE--FRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK---- 431
V +L E FR L + + + ++L ACA L +G+ H Y L+ ++ M E+
Sbjct: 227 VLELLAEMVFRCGHGL--NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYD 284
Query: 432 ---LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQE 488
+ +ALVDMY+KCGNI + F+L+ R+V+ +N + +G A HG I +F +
Sbjct: 285 DVMVGTALVDMYAKCGNIDSSMNVFRLM--RKRNVVTWNALFSGLAMHGKGRMVIDMFPQ 342
Query: 489 MLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGN 548
M++ +KPD +TF A+LSAC H G+V+ G + F S++ Y + P++ HYACMVD+ GR
Sbjct: 343 MIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAG 400
Query: 549 QLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLAN 608
+E+A MR++P+ + + G+ L +C ++ + ++ + EL+++ N + ++N
Sbjct: 401 LIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSN 460
Query: 609 VYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
+Y AEG+ + +R +R + K+PG S IYV + +H F+SGD SH + IY L
Sbjct: 461 MYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKL 518
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 196/454 (43%), Gaps = 51/454 (11%)
Query: 63 NAIIMAYIKAHNLTQARALFD--SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSA 120
NA+ Y + + A+ LFD S +D V + ++LS+++ G ++ LF M+
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRY-GLLVNSMKLFVEMRRK 105
Query: 121 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 180
R + +D++++ + + AKL + + +Q H VK S ++L+DMY KCG
Sbjct: 106 R--VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVS 163
Query: 181 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 240
E +F + +VS ++ + ++ VF + PE N V+W ++AGY+
Sbjct: 164 EVKRIFEELEE-KSVVSWTVVLDTVVKWEGLERGREVFHEMPERN-AVAWTVMVAGYLGA 221
Query: 241 GYMERALTLFIEMIEK-GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND------- 292
G+ L L EM+ + G N TL S+LSAC L +G+ VH LK +
Sbjct: 222 GFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEA 281
Query: 293 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 352
+ V + +VD Y KCGN+ + +V F
Sbjct: 282 SYDDVMVGTALVDMYAKCGNIDSSMNV-------------------------------FR 310
Query: 353 SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 412
+ +RN V W AL SG + V +F + + PD + VL AC+ +
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM--IREVKPDDLTFTAVLSACSHSGIVD 368
Query: 413 LGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG 472
G + + L + +VD+ + G I AE + + +V+L ++
Sbjct: 369 EGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVL-GSLLGS 427
Query: 473 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLS 506
+ HG A ++ +E++++S P + L+S
Sbjct: 428 CSVHGKVEIAERIKRELIQMS--PGNTEYQILMS 459
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H A+K G+ +S+ CN L+ +Y GL+ E ++F+++ ++ SW ++ +K L
Sbjct: 134 HGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGL 193
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+ R +F R+ V++ M++ Y GA G L+L A M R G++ +TL +ML
Sbjct: 194 ERGREVFHEMPERNAVAWTVMVAGYLGA-GFTREVLELLAEM-VFRCGHGLNFVTLCSML 251
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFAL-------SSLIDMYSKCGSFREAYNVFSG 188
+ A+ + G+ +H Y +K + + A ++L+DMY+KCG+ + NVF
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR- 310
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 248
L+ K + V+WN L +G +G +
Sbjct: 311 ------LMRK--------------------------RNVVTWNALFSGLAMHGKGRMVID 338
Query: 249 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG-KCVHAL 287
+F +MI + ++ + T +VLSAC+ + G +C H+L
Sbjct: 339 MFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL 377
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 144/316 (45%), Gaps = 45/316 (14%)
Query: 326 KSP--FATSSLIAGYSSKGNMTKAKRLFD--SLSERNYVVWTALCSGYVKSQQCEAVFKL 381
K+P + +++L Y+S G M A++LFD LSE++ V WT L S + + KL
Sbjct: 39 KAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKL 98
Query: 382 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYS 441
F E R I D ++ + G CA L +Q H ++ + K+ +AL+DMY
Sbjct: 99 FVEMRRKRVEIDDVSVVC-LFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYG 157
Query: 442 KCGNIAYAEKSFQ-----------LVTDS------------------DRDVILYNVMIAG 472
KCG ++ ++ F+ +V D+ +R+ + + VM+AG
Sbjct: 158 KCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAG 217
Query: 473 YAHHGFENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGE-------KFFMSM 524
Y GF + ++L EM+ + + +T ++LSAC G + +G K M M
Sbjct: 218 YLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMM 277
Query: 525 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTL 584
E+ + ++ +VDMY + ++ ++ R + + + W A + ++ +
Sbjct: 278 GEEAS-YDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRM 335
Query: 585 VKQAEEELLK-VEADN 599
V ++++ V+ D+
Sbjct: 336 VIDMFPQMIREVKPDD 351
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 401 VLGACAIQATLSLGKQTHAYILRTKLNMDEK--LASALVDMYSKCGNIAYAEKSFQLVTD 458
+L CA ++ L GK+ HA + + L + L++AL Y+ G + A+K F +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 459 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC---RHRGLVE 515
S++D + + +++ ++ +G +++LF EM + ++ D ++ V L C G +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 516 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGR 546
G + M VL + ++DMYG+
Sbjct: 132 QGHGVAVKM----GVLTSVKVCNALMDMYGK 158
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/652 (26%), Positives = 296/652 (45%), Gaps = 102/652 (15%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +K G S + CN L+ +Y+ G EA+ +F +MP +
Sbjct: 267 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK------------------ 308
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
DL+S+NS+++++ DG AL L M S+ ++ + +T T+ L
Sbjct: 309 -------------DLISWNSLMASFVN-DGRSLDALGLLCSMISSGKSV--NYVTFTSAL 352
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
G+ +H +V + ++ ++L+ MY K G E+
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR----------- 401
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
V + P D V+WN LI GY ++ ++AL F M
Sbjct: 402 ---------------------VLLQMPR-RDVVAWNALIGGYAEDEDPDKALAAFQTMRV 439
Query: 256 KGIEYNQHTLASVLSAC-TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
+G+ N T+ SVLSAC L+ GK +HA ++ S++ V + ++ Y KC
Sbjct: 440 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC---- 495
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 374
G+++ ++ LF+ L RN + W A+ +
Sbjct: 496 ---------------------------GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 528
Query: 375 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 434
E V KL + R+ + D L A A A L G+Q H ++ D + +
Sbjct: 529 GEEVLKLVSKMRSFGVSL-DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFN 587
Query: 435 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 494
A DMYSKCG I K L +R + +N++I+ HG+ + F EML++ +
Sbjct: 588 AAADMYSKCGEIGEVVK--MLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 645
Query: 495 KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 554
KP +TFV+LL+AC H GLV+ G ++ + D+ + P I H C++D+ GR +L +A
Sbjct: 646 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 705
Query: 555 EFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEG 614
F+ K+P++ + +W + L +CKI+ N ++A E L K+E ++ S YV +N++A G
Sbjct: 706 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 765
Query: 615 KWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
+W ++ +RK+M K K CSW+ +++ + F GD +H + IY+ L
Sbjct: 766 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 817
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/517 (24%), Positives = 233/517 (45%), Gaps = 79/517 (15%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N++I N+ A +FD S RD +S+NS+ +AYA +G + +F+ M+ D
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA-QNGHIEESFRIFSLMRRFHD 240
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ + T++T+L++ + +G+ +H +VK D ++L+ MY+ G EA
Sbjct: 241 EV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
N+ +K D +SWN+L+A +V +G
Sbjct: 299 ---------------------------------NLVFKQMPTKDLISWNSLMASFVNDGR 325
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
AL L MI G N T S L+AC + G+ +H LV+ + NQ + +
Sbjct: 326 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 385
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
+V Y K G M ++++R+ + R+ V W
Sbjct: 386 LVSMYGKIGEM-------------------------------SESRRVLLQMPRRDVVAW 414
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT-LSLGKQTHAYI 421
AL GY + + + F+ R E + + + +V+VL AC + L GK HAYI
Sbjct: 415 NALIGGYAEDEDPDKALAAFQTMR-VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 473
Query: 422 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 481
+ DE + ++L+ MY+KCG+++ ++ F + +R++I +N M+A AHHG +
Sbjct: 474 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL--DNRNIITWNAMLAANAHHGHGEE 531
Query: 482 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACM 540
++L +M + D +F LSA ++E G++ +++K + I++ A
Sbjct: 532 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA- 590
Query: 541 VDMYGRGNQLEKAVEFMRKIPIQIDATI--WGAFLNA 575
DMY + ++ + V+ + P ++ ++ W ++A
Sbjct: 591 -DMYSKCGEIGEVVKML---PPSVNRSLPSWNILISA 623
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 219/514 (42%), Gaps = 106/514 (20%)
Query: 12 VYRDHVQA----IKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIM 67
++R+ VQ KSGL S ++ ++HLY ++GL+ + K+F++MP RN SW ++++
Sbjct: 57 MFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMV 116
Query: 68 AYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMD 127
Y D ++ Y G G + +G +
Sbjct: 117 GY------------------SDKGEPEEVIDIYKGMRG----------------EGVGCN 142
Query: 128 EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS 187
E +++ +++ L+ G+Q+ +VK+ + SK A+
Sbjct: 143 ENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE-SKLAV--------------------- 180
Query: 188 GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERAL 247
+N++++ G +D A +F + E DT+SWN++ A Y QNG++E +
Sbjct: 181 ----------ENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESF 229
Query: 248 TLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFY 307
+F M E N T++++LS + K G+ +H LV+K G
Sbjct: 230 RIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK----------MGFDSVV 279
Query: 308 CKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCS 367
C C ++L+ Y+ G +A +F + ++ + W +L +
Sbjct: 280 CVC---------------------NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 318
Query: 368 GYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN 427
+V + L ++ + + + + L AC G+ H ++ + L
Sbjct: 319 SFVNDGRSLDALGLLCSMISSGKSV-NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF 377
Query: 428 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
++ + +ALV MY K G ++ + + L+ RDV+ +N +I GYA +KA+ FQ
Sbjct: 378 YNQIIGNALVSMYGKIGEMSESRRV--LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 435
Query: 488 EMLKISLKPDAITFVALLSACRHRG-LVELGEKF 520
M + + IT V++LSAC G L+E G+
Sbjct: 436 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL 469
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 201/456 (44%), Gaps = 47/456 (10%)
Query: 127 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGS-FREAYNV 185
+E++ TM++ ++ + G + M S F ++SL+ + GS FRE V
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 186 --FSGCDGVV-DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
F G++ D+ A++ G + + VF + P+ N VSW +L+ GY G
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN-VVSWTSLMVGYSDKGE 123
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
E + ++ M +G+ N+++++ V+S+C LK LG+ + V+K+
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS----------- 172
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERNYVV 361
G++S A +SLI+ S GN+ A +FD +SER+ +
Sbjct: 173 ---------------------GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 211
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI--IVNVLGACAIQATLSLGKQTHA 419
W ++ + Y ++ E F++F R + T + +++VLG Q G+ H
Sbjct: 212 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ---KWGRGIHG 268
Query: 420 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 479
+++ + + + L+ MY+ G A F+ + +D+I +N ++A + + G
Sbjct: 269 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP--TKDLISWNSLMASFVNDGRS 326
Query: 480 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 539
A+ L M+ + +TF + L+AC E G + +I A
Sbjct: 327 LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA- 385
Query: 540 MVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
+V MYG+ ++ ++ + ++P + D W A +
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 420
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/652 (26%), Positives = 296/652 (45%), Gaps = 102/652 (15%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +K G S + CN L+ +Y+ G EA+ +F +MP +
Sbjct: 284 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK------------------ 325
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
DL+S+NS+++++ DG AL L M S+ ++ + +T T+ L
Sbjct: 326 -------------DLISWNSLMASFVN-DGRSLDALGLLCSMISSGKSV--NYVTFTSAL 369
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
G+ +H +V + ++ ++L+ MY K G E+
Sbjct: 370 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR----------- 418
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
V + P D V+WN LI GY ++ ++AL F M
Sbjct: 419 ---------------------VLLQMPR-RDVVAWNALIGGYAEDEDPDKALAAFQTMRV 456
Query: 256 KGIEYNQHTLASVLSAC-TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
+G+ N T+ SVLSAC L+ GK +HA ++ S++ V + ++ Y KC
Sbjct: 457 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC---- 512
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 374
G+++ ++ LF+ L RN + W A+ +
Sbjct: 513 ---------------------------GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 545
Query: 375 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 434
E V KL + R+ + D L A A A L G+Q H ++ D + +
Sbjct: 546 GEEVLKLVSKMRSFGVSL-DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFN 604
Query: 435 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 494
A DMYSKCG I K L +R + +N++I+ HG+ + F EML++ +
Sbjct: 605 AAADMYSKCGEIGEVVK--MLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 662
Query: 495 KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 554
KP +TFV+LL+AC H GLV+ G ++ + D+ + P I H C++D+ GR +L +A
Sbjct: 663 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 722
Query: 555 EFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEG 614
F+ K+P++ + +W + L +CKI+ N ++A E L K+E ++ S YV +N++A G
Sbjct: 723 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 782
Query: 615 KWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
+W ++ +RK+M K K CSW+ +++ + F GD +H + IY+ L
Sbjct: 783 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 834
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 219/514 (42%), Gaps = 106/514 (20%)
Query: 12 VYRDHVQA----IKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIM 67
++R+ VQ KSGL S ++ ++HLY ++GL+ + K+F++MP RN SW ++++
Sbjct: 74 MFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMV 133
Query: 68 AYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMD 127
Y D ++ Y G G + +G +
Sbjct: 134 GY------------------SDKGEPEEVIDIYKGMRG----------------EGVGCN 159
Query: 128 EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS 187
E +++ +++ L+ G+Q+ +VK+ + SK A+
Sbjct: 160 ENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE-SKLAV--------------------- 197
Query: 188 GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERAL 247
+N++++ G +D A +F + E DT+SWN++ A Y QNG++E +
Sbjct: 198 ----------ENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESF 246
Query: 248 TLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFY 307
+F M E N T++++LS + K G+ +H LV+K G
Sbjct: 247 RIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK----------MGFDSVV 296
Query: 308 CKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCS 367
C C ++L+ Y+ G +A +F + ++ + W +L +
Sbjct: 297 CVC---------------------NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 335
Query: 368 GYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN 427
+V + L ++ + + + + L AC G+ H ++ + L
Sbjct: 336 SFVNDGRSLDALGLLCSMISSGKSV-NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF 394
Query: 428 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
++ + +ALV MY K G ++ + + L+ RDV+ +N +I GYA +KA+ FQ
Sbjct: 395 YNQIIGNALVSMYGKIGEMSESRRV--LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 452
Query: 488 EMLKISLKPDAITFVALLSACRHRG-LVELGEKF 520
M + + IT V++LSAC G L+E G+
Sbjct: 453 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL 486
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 208/473 (43%), Gaps = 51/473 (10%)
Query: 114 FARMQSARDTIGM----DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 169
F R++ AR + +E++ TM++ ++ + G + M S F ++SL
Sbjct: 5 FGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASL 64
Query: 170 IDMYSKCGS-FREAYNV--FSGCDGVV-DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN 225
+ + GS FRE V F G++ D+ A++ G + + VF + P+ N
Sbjct: 65 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 124
Query: 226 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVH 285
VSW +L+ GY G E + ++ M +G+ N+++++ V+S+C LK LG+ +
Sbjct: 125 -VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQII 183
Query: 286 ALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNM 344
V+K+ G++S A +SLI+ S GN+
Sbjct: 184 GQVVKS--------------------------------GLESKLAVENSLISMLGSMGNV 211
Query: 345 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI--IVNVL 402
A +FD +SER+ + W ++ + Y ++ E F++F R + T + +++VL
Sbjct: 212 DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL 271
Query: 403 GACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD 462
G Q G+ H +++ + + + L+ MY+ G A F+ + +D
Sbjct: 272 GHVDHQ---KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP--TKD 326
Query: 463 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFM 522
+I +N ++A + + G A+ L M+ + +TF + L+AC E G
Sbjct: 327 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 386
Query: 523 SMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
+ +I A +V MYG+ ++ ++ + ++P + D W A +
Sbjct: 387 LVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 437
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 183/660 (27%), Positives = 309/660 (46%), Gaps = 74/660 (11%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIH--GLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAH 73
H +KSG +S+F N L+ LY + KLFD++P R+ SWN ++ + +K
Sbjct: 204 HGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK-- 261
Query: 74 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
+ SH+ A DLF M + G+D TL+T
Sbjct: 262 ---------EGKSHK---------------------AFDLFYEMNRV-EGFGVDSFTLST 290
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
+L+ V+ G+++H ++ ++LI YSK ++ +++
Sbjct: 291 LLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMM-MAQ 349
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
D V+ M+ A G +D A+ +F E N T+++N L+AG+ +NG+ +AL LF +M
Sbjct: 350 DAVTFTEMITAYMSFGMVDSAVEIFANVTEKN-TITYNALMAGFCRNGHGLKALKLFTDM 408
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
+++G+E +L S + AC + K+ + +H +K N + + ++D +C M
Sbjct: 409 LQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERM 468
Query: 314 RYAESVYA--GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK 371
AE ++ + S AT+S+I GY+ G KA LF LC
Sbjct: 469 ADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHR----------TLCE---- 514
Query: 372 SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK 431
+ L D + + +L C +G Q H Y L+ D
Sbjct: 515 -----------------QKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDIS 557
Query: 432 LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 491
L ++L+ MY+KC + A K F T + DVI +N +I+ Y ++A+ L+ M +
Sbjct: 558 LGNSLISMYAKCCDSDDAIKIFN--TMREHDVISWNSLISCYILQRNGDEALALWSRMNE 615
Query: 492 ISLKPDAITFVALLSACRHRGLVELG--EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQ 549
+KPD IT ++SA R+ +L F+SMK Y++ P HY V + G
Sbjct: 616 KEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGL 675
Query: 550 LEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANV 609
LE+A + + +P+Q + ++ A L++C+I++NT++ K+ + +L + + S Y+ +N+
Sbjct: 676 LEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNI 735
Query: 610 YAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCL 669
Y+A G W+ IR+EMR + K P SWI EN IH F + DTSH + IY L L
Sbjct: 736 YSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEIL 795
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 222/476 (46%), Gaps = 38/476 (7%)
Query: 45 QEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGAD 104
+ H F K+ NA+I Y+K +A +F S S +VSY +++S ++ +
Sbjct: 100 KAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLN 159
Query: 105 GCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKF 164
+ AL +F RM+ A + +E T +L ++ G Q+H +VK+ S F
Sbjct: 160 -LEIEALKVFFRMRKA-GLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVF 217
Query: 165 ALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEF 224
+SL+ +Y K + S CD V L +F + P+
Sbjct: 218 VSNSLMSLYDK--------DSGSSCDDV----------------------LKLFDEIPQ- 246
Query: 225 NDTVSWNTLIAGYVQNGYMERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKC 283
D SWNT+++ V+ G +A LF EM +G + TL+++LS+CT L G+
Sbjct: 247 RDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRE 306
Query: 284 VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 343
+H ++ V++ ++ FY K +M+ ES+Y + + + +I Y S G
Sbjct: 307 LHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGM 366
Query: 344 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 403
+ A +F +++E+N + + AL +G+ ++ KLF + + D + + +
Sbjct: 367 VDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD-FSLTSAVD 425
Query: 404 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF-QLVTDSDRD 462
AC + + + +Q H + ++ + + +AL+DM ++C +A AE+ F Q ++ D
Sbjct: 426 ACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSS 485
Query: 463 VILYNVMIAGYAHHGFENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELG 517
++ I GYA +G +KA+ LF L + L D ++ +L+ C G E+G
Sbjct: 486 KATTSI-IGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 262/499 (52%), Gaps = 11/499 (2%)
Query: 175 KCGSFREAYNVFS-----GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK--NPEFNDT 227
+C S E Y + + G VS+ +A G +D A K +P
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPP---N 73
Query: 228 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHAL 287
WN +I G+ + E++++++I+M+ G+ + T ++ + + L KLG +H
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 288 VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKA 347
V+K+ + F+ + ++ Y + A ++ + K+ +S++ Y+ G++ A
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 348 KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAI 407
+ +FD +SER+ V W+++ GYVK + ++F + + + + +V+V+ ACA
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 253
Query: 408 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 467
L+ GK H YIL L + L ++L+DMY+KCG+I A F + + D +++N
Sbjct: 254 LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 527
+I G A HGF +++QLF +M + + PD ITF+ LL+AC H GLV+ FF S+KE
Sbjct: 314 AIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES 373
Query: 528 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQ 587
P+ HYACMVD+ R ++ A +F+ ++PI+ ++ GA LN C + N L +
Sbjct: 374 -GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAET 432
Query: 588 AEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIH 647
++L++++ N RYV LANVYA ++ +R+ M K K+ G S + ++ H
Sbjct: 433 VGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRH 492
Query: 648 VFTSGDTSHSKADAIYSTL 666
F + D +H +D IY+ L
Sbjct: 493 RFIAHDKTHFHSDKIYAVL 511
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 134/258 (51%), Gaps = 33/258 (12%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +KSGL +F CN LIH+Y A KLFD+MPH+N +WN+I+ AY K+ ++
Sbjct: 131 HCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDV 190
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
AR +FD S RD+V+++SM+ Y G AL++F +M + +E+T+ +++
Sbjct: 191 VSARLVFDEMSERDVVTWSSMIDGYV-KRGEYNKALEIFDQMMRMGSSKA-NEVTMVSVI 248
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
A L + GK +H Y++ L+ +SLIDMY+KCGS +A++VF
Sbjct: 249 CACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVF--------- 299
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+ + + D + WN +I G +G++ +L LF +M E
Sbjct: 300 ----------------------YRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRE 337
Query: 256 KGIEYNQHTLASVLSACT 273
I+ ++ T +L+AC+
Sbjct: 338 SKIDPDEITFLCLLAACS 355
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 141/445 (31%), Positives = 234/445 (52%), Gaps = 40/445 (8%)
Query: 214 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 273
A +F + P+ N +SW T+I+ Y + ++AL L + M+ + N +T +SVL +C
Sbjct: 115 AHQLFDQMPQRN-VISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN 173
Query: 274 GLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSS 333
G+ +++ +H ++K S+ FV S ++D + K G A SV
Sbjct: 174 GMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV-------------- 216
Query: 334 LIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 393
FD + + +VW ++ G+ ++ + + +LF+ + I
Sbjct: 217 -----------------FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA-GFIA 258
Query: 394 DTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF 453
+ + +VL AC A L LG Q H +I+ K + D L +ALVDMY KCG++ A + F
Sbjct: 259 EQATLTSVLRACTGLALLELGMQAHVHIV--KYDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 454 QLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGL 513
+ +RDVI ++ MI+G A +G+ +A++LF+ M KP+ IT V +L AC H GL
Sbjct: 317 NQM--KERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 514 VELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFL 573
+E G +F SMK+ Y + P HY CM+D+ G+ +L+ AV+ + ++ + DA W L
Sbjct: 375 LEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Query: 574 NACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATK 633
AC++ N L + A ++++ ++ ++ Y L+N+YA KW+ + IR MR + K
Sbjct: 435 GACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKK 494
Query: 634 LPGCSWIYVENGIHVFTSGDTSHSK 658
PGCSWI V IH F GD SH +
Sbjct: 495 EPGCSWIEVNKQIHAFIIGDNSHPQ 519
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 201/483 (41%), Gaps = 115/483 (23%)
Query: 60 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 119
F N +I Y+K + L A LFD R+++S+ +M+SAY+ AL+L M
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK-IHQKALELLVLM-- 153
Query: 120 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 179
RD + + T +++L + V + +H ++K + F S+LID+++K G
Sbjct: 154 LRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 180 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 239
+A +VF + MV D + WN++I G+ Q
Sbjct: 211 EDALSVF------------DEMVTG---------------------DAIVWNSIIGGFAQ 237
Query: 240 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 299
N + AL LF M G Q TL SVL ACTGL L+LG H ++K D + +
Sbjct: 238 NSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLIL 295
Query: 300 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 359
++ +VD YCKCG++ A R+F+ + ER+
Sbjct: 296 NNALVDMYCKCGSLE-------------------------------DALRVFNQMKERDV 324
Query: 360 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 419
+ W+ + SG ++ + KLF +++ P+ + IV VL AC +HA
Sbjct: 325 ITWSTMISGLAQNGYSQEALKLFERMKSS-GTKPNYITIVGVLFAC-----------SHA 372
Query: 420 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 479
+L Y +S + + D Y MI G
Sbjct: 373 GLLEDGW---------------------YYFRSMKKLYGIDPVREHYGCMIDLLGKAGKL 411
Query: 480 NKAIQLFQEMLKISLKPDAITFVALLSACR-HRGLV--ELGEKFFMSMKED----YNVLP 532
+ A++L EM +PDA+T+ LL ACR R +V E K +++ + Y +L
Sbjct: 412 DDAVKLLNEM---ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLS 468
Query: 533 EIY 535
IY
Sbjct: 469 NIY 471
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 128/273 (46%), Gaps = 46/273 (16%)
Query: 10 LVVYRDHVQAIKSGLASSIFTCNQLIHLYSIH-GLLQEAHKLFDKMPHRNAFSWNAIIMA 68
+++ RD+V+ +S + +CN + + +H G+++E + + F +A+I
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE-------SDVFVRSALIDV 203
Query: 69 YIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDE 128
+ K A ++FD D + +NS++ +A D VAL+LF RM+ R ++
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSD-VALELFKRMK--RAGFIAEQ 260
Query: 129 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG 188
TLT++L L ++ G Q H ++VK DL ++L+DMY KCGS +A VF
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVF-- 316
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 248
N M + D ++W+T+I+G QNGY + AL
Sbjct: 317 ----------NQM---------------------KERDVITWSTMISGLAQNGYSQEALK 345
Query: 249 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG 281
LF M G + N T+ VL AC+ L+ G
Sbjct: 346 LFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 14/253 (5%)
Query: 329 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 388
F + LI Y + A +LFD + +RN + WT + S Y K + + +L
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL-VLMLR 155
Query: 389 EALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAY 448
+ + P+ +VL +C +S + H I++ L D + SAL+D+++K G
Sbjct: 156 DNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 449 AEKSF-QLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 507
A F ++VT D I++N +I G+A + + A++LF+ M + + T ++L A
Sbjct: 213 ALSVFDEMVTG---DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 508 CRHRGLVELGEKFFMSM-KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDA 566
C L+ELG + + + K D +++ +VDMY + LE A+ ++ + D
Sbjct: 270 CTGLALLELGMQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMK-ERDV 324
Query: 567 TIWGAFLNACKIN 579
W ++ N
Sbjct: 325 ITWSTMISGLAQN 337
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 176/647 (27%), Positives = 298/647 (46%), Gaps = 86/647 (13%)
Query: 28 IFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASH 87
+ CN L+ + EA ++F+++P + + +I Y +++ L A LFD
Sbjct: 40 VLICNHLLSRR-----IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPV 94
Query: 88 RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYG 147
RD+VS+NSM+S +T A+ LF M ++ T M+N C+
Sbjct: 95 RDVVSWNSMISGCVECGDMNT-AVKLFDEMPER------SVVSWTAMVN-------GCF- 139
Query: 148 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCR 207
+ G +A +F V D + N+MV +
Sbjct: 140 ---------------------------RSGKVDQAERLFYQMP-VKDTAAWNSMVHGYLQ 171
Query: 208 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 267
GK+D AL +F + P N +SW T+I G QN AL LF M+ I+
Sbjct: 172 FGKVDDALKLFKQMPGKN-VISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTC 230
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
V++AC +G VH L++K ++VS+ ++ FY C +
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRI-------------- 276
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 387
++++FD VWTAL SGY +++ E +F
Sbjct: 277 -----------------GDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGM-L 318
Query: 388 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 447
+++P+ + L +C+ TL GK+ H ++ L D + ++LV MYS GN+
Sbjct: 319 RNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVN 378
Query: 448 YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 507
A F + + ++ +N +I G A HG A +F +M++++ +PD ITF LLSA
Sbjct: 379 DAVSVF--IKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSA 436
Query: 508 CRHRGLVELGEKFFMSMKEDYN-VLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDA 566
C H G +E G K F M N + +I HY CMVD+ GR +L++A E + ++ ++ +
Sbjct: 437 CSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNE 496
Query: 567 TIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEM 626
+W A L+AC+++++ ++A + +++ + + YV L+N+YA+ G+W+ + ++R +M
Sbjct: 497 MVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKM 556
Query: 627 RGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL 673
+ K PG SW+ + H F SGD H IY L L KL
Sbjct: 557 KKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIYEKLEFLREKL 601
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 157/512 (30%), Positives = 255/512 (49%), Gaps = 40/512 (7%)
Query: 170 IDMYSKCGSFRE-----AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEF 224
I + SKC S RE AY + S + V + + M A ++F E
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSE- 91
Query: 225 NDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCV 284
D V +N++ GY + +LF+E++E GI + +T S+L AC K L+ G+ +
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 285 HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNM 344
H L +K N +V +++ Y +C ++ A V
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCV------------------------- 186
Query: 345 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 404
FD + E V + A+ +GY + + LFRE + + L P+ + +++VL +
Sbjct: 187 ------FDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQG-KYLKPNEITLLSVLSS 239
Query: 405 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 464
CA+ +L LGK H Y + K+ +AL+DM++KCG++ A F+ + +D
Sbjct: 240 CALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM--RYKDTQ 297
Query: 465 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 524
++ MI YA+HG K++ +F+ M +++PD ITF+ LL+AC H G VE G K+F M
Sbjct: 298 AWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
Query: 525 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTL 584
+ ++P I HY MVD+ R LE A EF+ K+PI +W L AC +NN L
Sbjct: 358 VSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDL 417
Query: 585 VKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVEN 644
++ E + +++ +G YV L+N+YA KW + +RK M+ ++A K+PGCS I V N
Sbjct: 418 AEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 477
Query: 645 GIHVFTSGDTSHSKADAIYSTLVCLYGKLYLT 676
+H F SGD S ++ L + +L L+
Sbjct: 478 VVHEFFSGDGVKSATTKLHRALDEMVKELKLS 509
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 179/407 (43%), Gaps = 74/407 (18%)
Query: 74 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR-MQSARDTIGMDEITLT 132
+++ AR LF++ S D+V +NSM Y+ T L++F+ ++ D I D T
Sbjct: 78 SMSYARHLFEAMSEPDIVIFNSMARGYSRF----TNPLEVFSLFVEILEDGILPDNYTFP 133
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
++L A + + G+Q+H +K D + + +LI+MY++C A VF
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVF------ 187
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
+ +V C V +N +I GY + AL+LF E
Sbjct: 188 ------DRIVEPC---------------------VVCYNAMITGYARRNRPNEALSLFRE 220
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
M K ++ N+ TL SVLS+C L L LGK +H K+ C V++ ++D + KCG+
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
+ A S++ + K A S++I Y++ G K+ +F+ + N
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN-------------- 326
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
+ PD + + +L AC+ + G++ + ++ +K + +
Sbjct: 327 ------------------VQPDEITFLGLLNACSHTGRVEEGRKYFSQMV-SKFGIVPSI 367
Query: 433 A--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 477
++VD+ S+ GN+ A + + S +L+ +++A + H
Sbjct: 368 KHYGSMVDLLSRAGNLEDAYEFIDKLPISPTP-MLWRILLAACSSHN 413
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 178/402 (44%), Gaps = 63/402 (15%)
Query: 8 DALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKL--------FDKMPHRNA 59
+ L V+ V+ ++ G+ +T L+ ++ L+E +L D N
Sbjct: 109 NPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDD----NV 164
Query: 60 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 119
+ +I Y + ++ AR +FD +V YN+M++ YA + + AL LF MQ
Sbjct: 165 YVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNE-ALSLFREMQG 223
Query: 120 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL--SSLIDMYSKCG 177
+ +EITL ++L+ A L + GK +H Y K + K+ ++LIDM++KCG
Sbjct: 224 K--YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK--HSFCKYVKVNTALIDMFAKCG 279
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
S +A ++F KM + DT +W+ +I Y
Sbjct: 280 SLDDAVSIFE----------------------KM-----------RYKDTQAWSAMIVAY 306
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 297
+G E+++ +F M + ++ ++ T +L+AC+ ++ G+ + ++ G
Sbjct: 307 ANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPS 366
Query: 298 FVSSG-IVDFYCKCGNMRYAESVYAGIGI-KSPFATSSLIAGYSSKGNMTKAKRLFDSLS 355
G +VD + GN+ A + I +P L+A SS N+ A+++ + +
Sbjct: 367 IKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIF 426
Query: 356 ER------NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 391
E +YV+ + L Y ++++ E V L + + +A+
Sbjct: 427 ELDDSHGGDYVILSNL---YARNKKWEYVDSLRKVMKDRKAV 465
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/497 (30%), Positives = 243/497 (48%), Gaps = 41/497 (8%)
Query: 214 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 273
A VF + PE N + N +I YV NG+ + +F M + + +T VL AC+
Sbjct: 93 ARKVFDEIPERN-VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS 151
Query: 274 GLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSS 333
+ +G+ +H K S FV +G+V Y KCG + A V + + + +S
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNS 211
Query: 334 LIAGY-------------------------------------SSKGNMTKAKRLFDSLSE 356
L+ GY ++ N+ K +F + +
Sbjct: 212 LVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGK 271
Query: 357 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 416
++ V W + Y+K+ +L+ + PD + I +VL AC + LSLGK+
Sbjct: 272 KSLVSWNVMIGVYMKNAMPVEAVELYSRMEA-DGFEPDAVSITSVLPACGDTSALSLGKK 330
Query: 417 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 476
H YI R KL + L +AL+DMY+KCG + A F+ + RDV+ + MI+ Y
Sbjct: 331 IHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM--KSRDVVSWTAMISAYGFS 388
Query: 477 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 536
G A+ LF ++ L PD+I FV L+AC H GL+E G F M + Y + P + H
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 537 YACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVE 596
ACMVD+ GR ++++A F++ + ++ + +WGA L AC+++++T + A ++L ++
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA 508
Query: 597 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSH 656
+ YV L+N+YA G+W E+ IR M+ K K PG S + V IH F GD SH
Sbjct: 509 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 568
Query: 657 SKADAIYSTLVCLYGKL 673
++D IY L L K+
Sbjct: 569 PQSDEIYRELDVLVKKM 585
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/531 (22%), Positives = 210/531 (39%), Gaps = 123/531 (23%)
Query: 65 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 124
++ AY ++ AR +FD R+++ N M+ +Y +G + +F M +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN-NGFYGEGVKVFGTMCGC--NV 136
Query: 125 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 184
D T +L + + G+++H K + F + L+ MY KCG EA
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKN----------------PEFNDT- 227
V D+VS N++V ++ + D AL V + P ++T
Sbjct: 197 VLDEMSR-RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 228 -------------------VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 268
VSWN +I Y++N A+ L+ M G E + ++ SV
Sbjct: 256 TENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 269 LSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 328
L AC L LGK +H + + N + + ++D Y KCG +
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLE-------------- 361
Query: 329 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY-VKSQQCEAVFKLFREFRT 387
KA+ +F+++ R+ V WTA+ S Y + C+AV LF + +
Sbjct: 362 -----------------KARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV-ALFSKLQD 403
Query: 388 TEALIPDTMIIVNVLGACAIQATLSLGKQ-----THAYILRTKLNMDEKLASALVDMYSK 442
+ L+PD++ V L AC+ L G+ T Y + +L E LA +VD+ +
Sbjct: 404 S-GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRL---EHLA-CMVDLLGR 458
Query: 443 CGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 502
G + +A + Q+M S++P+ +
Sbjct: 459 AGKV---------------------------------KEAYRFIQDM---SMEPNERVWG 482
Query: 503 ALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY-HYACMVDMYGRGNQLEK 552
ALL ACR ++G ++ + + + PE +Y + ++Y + + E+
Sbjct: 483 ALLGACRVHSDTDIG---LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 530
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 127/309 (41%), Gaps = 80/309 (25%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIK---- 71
H A K GL+S++F N L+ +Y G L EA + D+M R+ SWN++++ Y +
Sbjct: 163 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF 222
Query: 72 ---------------------------------AHNLTQARALFDSASHRDLVSYNSMLS 98
N+ + +F + LVS+N M+
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG 282
Query: 99 AYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTA 158
Y + A++L++RM++ D D +++T++L + GK++H Y+ +
Sbjct: 283 VYM-KNAMPVEAVELYSRMEA--DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 159 NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF 218
+ ++LIDMY+KCG +A +VF
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVF-------------------------------- 367
Query: 219 WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT----- 273
+N + D VSW +I+ Y +G A+ LF ++ + G+ + + L+AC+
Sbjct: 368 -ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLL 426
Query: 274 --GLKCLKL 280
G C KL
Sbjct: 427 EEGRSCFKL 435
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 142/302 (47%), Gaps = 26/302 (8%)
Query: 298 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSL----IAGYSSKGNMTKAKRLFDS 353
F+ ++D Y ++R +V++ I ++ SSL + Y+S ++ A+++FD
Sbjct: 43 FLLGQVLDTY---PDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99
Query: 354 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 413
+ ERN ++ + YV + K+F + PD VL AC+ T+ +
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVI 158
Query: 414 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD--SDRDVILYNVMIA 471
G++ H + L+ + + LV MY KCG ++ A +LV D S RDV+ +N ++
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEA----RLVLDEMSRRDVVSWNSLVV 214
Query: 472 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH---RGLVELGEKFFMSMKEDY 528
GYA + + A+++ +EM + + DA T +LL A + ++ + + FF K+
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK-- 272
Query: 529 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP---IQIDATIWGAFLNACKINNNTTLV 585
+ + M+ +Y + +AVE ++ + DA + L AC + +L
Sbjct: 273 ----SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLG 328
Query: 586 KQ 587
K+
Sbjct: 329 KK 330
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 40 IHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSA 99
IHG + E KL N NA+I Y K L +AR +F++ RD+VS+ +M+SA
Sbjct: 331 IHGYI-ERKKLIP-----NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 100 YA-GADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTA 158
Y GCD VAL F+++Q + + D I T L + ++ G+ M
Sbjct: 385 YGFSGRGCDAVAL--FSKLQDS--GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHY 440
Query: 159 NDLSKFA-LSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMAL-- 215
+ L+ ++D+ + G +EAY + A++ AC D+ L
Sbjct: 441 KITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLA 500
Query: 216 --NVFWKNPEFNDTVSWNTLIAG-YVQNGYMERALTLFIEMIEKGIEYN 261
+F PE + + L++ Y + G E + M KG++ N
Sbjct: 501 ADKLFQLAPEQS---GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN 546
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/529 (29%), Positives = 261/529 (49%), Gaps = 46/529 (8%)
Query: 124 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 183
+ +D+ +L+ +L ++L V G Q+H ++ KT F + LI +Y KCG +
Sbjct: 117 VSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSR 176
Query: 184 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNP-EFNDTVSWNTLIAGYVQNG- 241
+F D VS N+M+ + G + A +F P E + +SWN++I+GY Q
Sbjct: 177 QMFDRMPKR-DSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD 235
Query: 242 YMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 300
++ A LF +M EK I +N
Sbjct: 236 GVDIASKLFADMPEKDLISWNS-------------------------------------- 257
Query: 301 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 360
++D Y K G + A+ ++ + + +++I GY+ G + AK LFD + R+ V
Sbjct: 258 --MIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV 315
Query: 361 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 420
+ ++ +GYV+++ ++F + L+PD +V VL A A LS H Y
Sbjct: 316 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY 375
Query: 421 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 480
I+ + + KL AL+DMYSKCG+I +A F+ + + D +N MI G A HG
Sbjct: 376 IVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSID--HWNAMIGGLAIHGLGE 433
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 540
A + ++ ++SLKPD ITFV +L+AC H GLV+ G F M+ + + P + HY CM
Sbjct: 434 SAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCM 493
Query: 541 VDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 600
VD+ R +E A + ++P++ + IW FL AC + + + L+ N
Sbjct: 494 VDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNP 553
Query: 601 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVF 649
S YV L+N+YA+ G W ++ R+R M+ ++ K+PGCSWI ++ +H F
Sbjct: 554 SSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 208/489 (42%), Gaps = 83/489 (16%)
Query: 21 KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARA 80
K+GL S +F N LI LY G L + ++FD+MP R++ S+N++I Y+K + AR
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 81 LFD--SASHRDLVSYNSMLSAYA-GADGCDTVALDLFARMQSARDTIGMDEITLTTMLNL 137
LFD ++L+S+NSM+S YA +DG D +A LFA M +D I
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQTSDGVD-IASKLFADMPE-KDLI------------- 253
Query: 138 SAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVS 197
+ +S+ID Y K G +A +F D+V+
Sbjct: 254 ---------------------------SWNSMIDGYVKHGRIEDAKGLFDVMPR-RDVVT 285
Query: 198 KNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM-IEK 256
M+ + G + A +F + P D V++N+++AGYVQN Y AL +F +M E
Sbjct: 286 WATMIDGYAKLGFVHHAKTLFDQMPH-RDVVAYNSMMAGYVQNKYHMEALEIFSDMEKES 344
Query: 257 GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 316
+ + TL VL A L L +H +++ + ++D Y KCG++++A
Sbjct: 345 HLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHA 404
Query: 317 ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE 376
V+ GI KS D W A+ G E
Sbjct: 405 MLVFEGIENKS-----------------------IDH--------WNAMIGGLAIHGLGE 433
Query: 377 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA--S 434
+ F + + +L PD + V VL AC+ + G ++R K ++ +L
Sbjct: 434 SAFDMLLQIERL-SLKPDDITFVGVLNACSHSGLVKEGLLCFE-LMRRKHKIEPRLQHYG 491
Query: 435 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 494
+VD+ S+ G+I A+ + + DVI + A H FE + +L+
Sbjct: 492 CMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGY 551
Query: 495 KPDAITFVA 503
P + ++
Sbjct: 552 NPSSYVLLS 560
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 174/380 (45%), Gaps = 24/380 (6%)
Query: 223 EFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGK 282
E D WN +I + +AL L M+E G+ ++ +L+ VL AC+ L +K G
Sbjct: 82 EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGM 141
Query: 283 CVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKG 342
+H + K S+ F+ + ++ Y KCG + + ++ + + + +S+I GY G
Sbjct: 142 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 201
Query: 343 NMTKAKRLFD--SLSERNYVVWTALCSGYVK-SQQCEAVFKLFREFRTTEALIPDTMIIV 399
+ A+ LFD + +N + W ++ SGY + S + KLF + + + ++M
Sbjct: 202 LIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSM--- 258
Query: 400 NVLGACAIQATLSLGKQTHAY-ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 458
I + G+ A + D + ++D Y+K G + +A+ F +
Sbjct: 259 -------IDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP- 310
Query: 459 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELG 517
RDV+ YN M+AGY + + +A+++F +M K S L PD T V +L A G +
Sbjct: 311 -HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKA 369
Query: 518 EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQ-IDATIWGAFLNAC 576
+ + E L A ++DMY + ++ A+ I + ID W A +
Sbjct: 370 IDMHLYIVEKQFYLGGKLGVA-LIDMYSKCGSIQHAMLVFEGIENKSIDH--WNAMIGGL 426
Query: 577 KINNNTTLVKQAEEELLKVE 596
I+ L + A + LL++E
Sbjct: 427 AIHG---LGESAFDMLLQIE 443
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 236/470 (50%), Gaps = 37/470 (7%)
Query: 199 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI--EK 256
+ +V R G A +F + PE D VSWN+LI+GY GY+ + + M+ E
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPE-RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEV 128
Query: 257 GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 316
G N+ T S++SAC + G+C+H LV+K V + +++Y K
Sbjct: 129 GFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGK------- 181
Query: 317 ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE 376
G++T + +LF+ LS +N V W + ++++ E
Sbjct: 182 ------------------------TGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAE 217
Query: 377 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 436
F R PD + VL +C + L + H I+ + ++ + +AL
Sbjct: 218 KGLAYFNMSRRV-GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTAL 276
Query: 437 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 496
+D+YSK G + + F +T D + + M+A YA HGF AI+ F+ M+ + P
Sbjct: 277 LDLYSKLGRLEDSSTVFHEITSPDS--MAWTAMLAAYATHGFGRDAIKHFELMVHYGISP 334
Query: 497 DAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 556
D +TF LL+AC H GLVE G+ +F +M + Y + P + HY+CMVD+ GR L+ A
Sbjct: 335 DHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGL 394
Query: 557 MRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKW 616
++++P++ + +WGA L AC++ +T L +A E L ++E +G YV L+N+Y+A G W
Sbjct: 395 IKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLW 454
Query: 617 NEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
+ RIR M+ K + GCS+I N IH F GD SH +++ I L
Sbjct: 455 KDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKL 504
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 187/473 (39%), Gaps = 105/473 (22%)
Query: 49 KLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDT 108
K+ + +R+ F + ++ Y++ + A LFD RDLVS+NS++S Y+G G
Sbjct: 56 KVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR-GYLG 114
Query: 109 VALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS 168
++ +RM + +E+T +M++ G+ +H ++K +++
Sbjct: 115 KCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNA 174
Query: 169 LIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTV 228
I+ Y K G ++ S C DL KN V
Sbjct: 175 FINWYGKTG------DLTSSCKLFEDLSIKN---------------------------LV 201
Query: 229 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 288
SWNT+I ++QNG E+ L F G E +Q T +VL +C + ++L + +H L+
Sbjct: 202 SWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLI 261
Query: 289 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 348
+ N+ +++ ++D Y K G + + +V+ I A ++++A Y++ G A
Sbjct: 262 MFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAI 321
Query: 349 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 408
+ F E + PD + ++L AC+
Sbjct: 322 KHF--------------------------------ELMVHYGISPDHVTFTHLLNACSHS 349
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILY 466
+ GK + + + +D +L S +VD+ + G L+ D
Sbjct: 350 GLVEEGKH-YFETMSKRYRIDPRLDHYSCMVDLLGRSG----------LLQD-------- 390
Query: 467 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 519
A L +EM ++P + + ALL ACR +LG K
Sbjct: 391 ---------------AYGLIKEM---PMEPSSGVWGALLGACRVYKDTQLGTK 425
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 7/259 (2%)
Query: 319 VYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAV 378
V + + F L+ Y G+ A++LFD + ER+ V W +L SGY
Sbjct: 57 VVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKC 116
Query: 379 FKLFREFRTTE-ALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 437
F++ +E P+ + ++++ AC + G+ H +++ + + K+ +A +
Sbjct: 117 FEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFI 176
Query: 438 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 497
+ Y K G++ + K F+ + S ++++ +N MI + +G K + F ++ +PD
Sbjct: 177 NWYGKTGDLTSSCKLFEDL--SIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPD 234
Query: 498 AITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 556
TF+A+L +C G+V L + + M ++ I ++D+Y + +LE +
Sbjct: 235 QATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCI--TTALLDLYSKLGRLEDSSTV 292
Query: 557 MRKIPIQIDATIWGAFLNA 575
+I D+ W A L A
Sbjct: 293 FHEI-TSPDSMAWTAMLAA 310
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 251/465 (53%), Gaps = 7/465 (1%)
Query: 227 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 286
T +N LI Y + ++ L+ + G+ + HT + +A + + +H+
Sbjct: 47 TFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHS 106
Query: 287 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTK 346
++ S+ F + ++ Y K G + A V+ + + +++I GY +G+M
Sbjct: 107 QFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKA 166
Query: 347 AKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 406
A LFDS+ +N WT + SG+ ++ K+F +++ P+ + +V+VL ACA
Sbjct: 167 AMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACA 226
Query: 407 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILY 466
L +G++ Y + + +A ++MYSKCG I A++ F+ + + R++ +
Sbjct: 227 NLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQ-RNLCSW 285
Query: 467 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 526
N MI A HG ++A+ LF +ML+ KPDA+TFV LL AC H G+V G++ F SM+E
Sbjct: 286 NSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEE 345
Query: 527 DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVK 586
+ + P++ HY CM+D+ GR +L++A + ++ +P++ DA +WG L AC + N + +
Sbjct: 346 VHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAE 405
Query: 587 QAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENG- 645
A E L K+E N V ++N+YAA KW+ + R+RK M+ + TK G S+ +VE G
Sbjct: 406 IASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSY-FVEVGV 464
Query: 646 -IHVFTSGDTSHSKADAIYSTLVCLYGKLYLT---FTELKQLDEI 686
+H FT D SH ++ IY L ++ ++ L F L Q +++
Sbjct: 465 DVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLEKSRFDSLLQPEQL 509
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 5/243 (2%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H Q +SG S F C LI Y+ G L A ++FD+M R+ WNA+I Y + ++
Sbjct: 105 HSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDM 164
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A LFDS +++ S+ +++S ++ +G + AL +F M+ + ++ + IT+ ++L
Sbjct: 165 KAAMELFDSMPRKNVTSWTTVISGFS-QNGNYSEALKMFLCMEKDK-SVKPNHITVVSVL 222
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
A L + G+++ Y + + + ++ I+MYSKCG A +F +L
Sbjct: 223 PACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNL 282
Query: 196 VSKNAMVAACCRDGKMDMALNVF---WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
S N+M+ + GK D AL +F + E D V++ L+ V G + + LF
Sbjct: 283 CSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKS 342
Query: 253 MIE 255
M E
Sbjct: 343 MEE 345
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 171/448 (38%), Gaps = 76/448 (16%)
Query: 74 NLTQARALFDSASHRDLVSYNSMLSA-YAGADGCDTVALDLFARMQSARDTIGMDEITLT 132
NL AR LFD + YN ++ A Y +++ L R + T
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPS----HHTFN 86
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
+ SA + +HS ++ + F ++LI Y+K G+ A VF
Sbjct: 87 FIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK- 145
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
D+ NAM+ R G M A+ +F P N T SW T+I+G+ QNG AL +F+
Sbjct: 146 RDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT-SWTTVISGFSQNGNYSEALKMFLC 204
Query: 253 M-IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCG 311
M +K ++ N T+ SVL AC L L++G+ + +N N +V + ++ Y KCG
Sbjct: 205 MEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCG 264
Query: 312 NMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL-SERNYVVWTALCSGYV 370
+ AKRLF+ L ++RN W ++
Sbjct: 265 MIDV-------------------------------AKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 371 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 430
+ + LF + E PD + V +L AC + G++
Sbjct: 294 THGKHDEALTLFAQM-LREGEKPDAVTFVGLLLACVHGGMVVKGQELF------------ 340
Query: 431 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
KS + V + Y MI G +A L + M
Sbjct: 341 --------------------KSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM- 379
Query: 491 KISLKPDAITFVALLSACRHRGLVELGE 518
+KPDA+ + LL AC G VE+ E
Sbjct: 380 --PMKPDAVVWGTLLGACSFHGNVEIAE 405
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 34/197 (17%)
Query: 19 AIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQA 78
A ++G +I+ CN I +YS G++ A +LF+++
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL------------------------ 276
Query: 79 RALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLS 138
+ R+L S+NSM+ + A G AL LFA+M R+ D +T +L
Sbjct: 277 ------GNQRNLCSWNSMIGSLA-THGKHDEALTLFAQM--LREGEKPDAVTFVGLLLAC 327
Query: 139 AKLRVVCYGKQMHSYMVKTANDLSKFA-LSSLIDMYSKCGSFREAYNVFSGCDGVVDLVS 197
+V G+++ M + K +ID+ + G +EAY++ D V
Sbjct: 328 VHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVV 387
Query: 198 KNAMVAACCRDGKMDMA 214
++ AC G +++A
Sbjct: 388 WGTLLGACSFHGNVEIA 404
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 183/635 (28%), Positives = 305/635 (48%), Gaps = 88/635 (13%)
Query: 13 YRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP-HRNAFSWNAIIMAYIK 71
+ + A AS + TCN++ IHG+ AH + + RN N+++ Y K
Sbjct: 53 HSSEIPATPKLYASLLQTCNKVFSF--IHGIQFHAHVVKSGLETDRNV--GNSLLSLYFK 108
Query: 72 -AHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTV-ALDLFARMQSARDTIGMD-- 127
+ + R +FD +D +S+ SM+S Y G + V AL++F M S G+D
Sbjct: 109 LGPGMRETRRVFDGRFVKDAISWTSMMSGYV--TGKEHVKALEVFVEMVS----FGLDAN 162
Query: 128 EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS 187
E TL++ + ++L V G+ H ++ + + F S+L +Y G RE +
Sbjct: 163 EFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLY---GVNREPVD--- 216
Query: 188 GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERAL 247
A VF + PE D + W +++ + +N E AL
Sbjct: 217 --------------------------ARRVFDEMPE-PDVICWTAVLSAFSKNDLYEEAL 249
Query: 248 TLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 306
LF M KG+ + T +VL+AC L+ LK GK +H ++ N SN V S ++D
Sbjct: 250 GLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDM 309
Query: 307 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 366
Y KCG++R +A+++F+ +S++N V W+AL
Sbjct: 310 YGKCGSVR-------------------------------EARQVFNGMSKKNSVSWSALL 338
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 426
GY ++ + E ++FRE D VL ACA A + LGK+ H +R
Sbjct: 339 GGYCQNGEHEKAIEIFREMEEK-----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGC 393
Query: 427 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLF 486
+ + SAL+D+Y K G I A + + + S R++I +N M++ A +G +A+ F
Sbjct: 394 FGNVIVESALIDLYGKSGCIDSASRVYSKM--SIRNMITWNAMLSALAQNGRGEEAVSFF 451
Query: 487 QEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR 546
+M+K +KPD I+F+A+L+AC H G+V+ G +F+ M + Y + P HY+CM+D+ GR
Sbjct: 452 NDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGR 511
Query: 547 GNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLV-KQAEEELLKVEADNGSRYVQ 605
E+A + + + DA++WG L C N + + V ++ + ++++E YV
Sbjct: 512 AGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVL 571
Query: 606 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 640
L+N+Y A G+ + IRK M + K G SWI
Sbjct: 572 LSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 387 TTEALIPDT-MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 445
T + IP T + ++L C + G Q HA+++++ L D + ++L+ +Y K G
Sbjct: 52 THSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGP 111
Query: 446 IAYAEKSFQLVTDSD--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 503
+ + V D +D I + M++GY KA+++F EM+ L + T +
Sbjct: 112 ---GMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSS 168
Query: 504 LLSACRHRGLVELGEKF---FMSMKEDYNVLPEIYHY--ACMVDMYGRGNQLEKAVEFMR 558
+ AC G V LG F ++ ++N H+ + + +YG + A
Sbjct: 169 AVKACSELGEVRLGRCFHGVVITHGFEWN------HFISSTLAYLYGVNREPVDARRVFD 222
Query: 559 KIPIQIDATIWGAFLNACKINN 580
++P + D W A L+A N+
Sbjct: 223 EMP-EPDVICWTAVLSAFSKND 243
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 173/651 (26%), Positives = 300/651 (46%), Gaps = 106/651 (16%)
Query: 30 TCNQLIHLYSIHGLLQEAHKLFDK-MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHR 88
+ ++L+H H Q LF++ + + FSWN++I ++ + A AL +S R
Sbjct: 12 SVSRLLHTER-HTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGD--SAEALLAFSSMR 68
Query: 89 DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGK 148
L Y + S C ++ D+F+ GK
Sbjct: 69 KLSLYPTRSSFPCAIKACSSL-FDIFS-------------------------------GK 96
Query: 149 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRD 208
Q H F S+LI MYS CG +A VF D + K
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVF-------DEIPKR--------- 140
Query: 209 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI------EKGIEYNQ 262
+ VSW ++I GY NG A++LF +++ + + +
Sbjct: 141 -----------------NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDS 183
Query: 263 HTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAG 322
L SV+SAC+ + L + +H+ V+K V + ++D Y K G
Sbjct: 184 MGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG----------- 232
Query: 323 IGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLF 382
+G + A+++FD + +++ V + ++ S Y +S F++F
Sbjct: 233 ------------------EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 383 REFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSK 442
R + + + + + VL A + L +GK H ++R L D + ++++DMY K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 443 CGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 502
CG + A K+F + +++V + MIAGY HG KA++LF M+ ++P+ ITFV
Sbjct: 335 CGRVETARKAFDRM--KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392
Query: 503 ALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPI 562
++L+AC H GL G ++F +MK + V P + HY CMVD+ GR L+KA + ++++ +
Sbjct: 393 SVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKM 452
Query: 563 QIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRI 622
+ D+ IW + L AC+I+ N L + + L ++++ N Y+ L+++YA G+W ++ R+
Sbjct: 453 KPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERV 512
Query: 623 RKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL 673
R M+ + K PG S + + +HVF GD H + + IY L L KL
Sbjct: 513 RMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKL 563
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 206/506 (40%), Gaps = 131/506 (25%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H QA G S IF + LI +YS G L++A K+FD++P RN SW ++I Y N
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A +LF DL D + +D + L +++
Sbjct: 159 LDAVSLFK----------------------------DLLVDENDDDDAMFLDSMGLVSVI 190
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ +++ + +HS+++K D ++L+D Y+K G
Sbjct: 191 SACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG------------------ 232
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+G + +A +F + + D VS+N++++ Y Q+G A +F +++
Sbjct: 233 ------------EGGVAVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 256 -KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
K + +N TL++VL A + L++GKC+H V++ + V + I+D YCKCG +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 374
A + + K+ + +++IAGY G+ KA LF ++ +
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID------------------ 381
Query: 375 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA- 433
+ P+ + V+VL AC+ A L + ++ + ++ L
Sbjct: 382 --------------SGVRPNYITFVSVLAACS-HAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 434 -SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
+VD+ + G F KA L Q M
Sbjct: 427 YGCMVDLLGRAG---------------------------------FLQKAYDLIQRM--- 450
Query: 493 SLKPDAITFVALLSACRHRGLVELGE 518
+KPD+I + +LL+ACR VEL E
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAE 476
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/635 (27%), Positives = 286/635 (45%), Gaps = 102/635 (16%)
Query: 57 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 116
R + +++ Y+K +T A+ LFD RD V +N+++ Y+ +G + A LF
Sbjct: 83 RFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS-RNGYECDAWKLFIV 141
Query: 117 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 176
M + TL +L + V G+ +H K+ +L ++LI YSKC
Sbjct: 142 M--LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKC 199
Query: 177 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 236
A V ++ + TVSWNT+I
Sbjct: 200 AELGSA---------------------------------EVLFREMKDKSTVSWNTMIGA 226
Query: 237 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA--------CTGLKC----------- 277
Y Q+G E A+T+F M EK +E + T+ ++LSA C +KC
Sbjct: 227 YSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTS 286
Query: 278 -----LKLGKCVHALVLKNDGCSNQFVS-SGIVDFYCKCGNMRYAESVYA---------- 321
+ G V A L + V + IV Y + G+M A ++
Sbjct: 287 LVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKID 346
Query: 322 ------------------------GIGIKSPFATSSLIAG-----YSSKGNMTKAKRLFD 352
G IKS T +L+ YS ++ LF+
Sbjct: 347 AVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFE 406
Query: 353 SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 412
L E + W ++ SG V+S + F++F + T L+PD + I ++L C+ L+
Sbjct: 407 QLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLN 466
Query: 413 LGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG 472
LGK+ H Y LR + + +AL+DMY+KCGN AE F+ + +N MI+G
Sbjct: 467 LGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTAT--WNSMISG 524
Query: 473 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 532
Y+ G +++A+ + EM + LKPD ITF+ +LSAC H G V+ G+ F +M +++ + P
Sbjct: 525 YSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISP 584
Query: 533 EIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEEL 592
+ HYA MV + GR +A+ + K+ I+ D+ +WGA L+AC I+ + + ++
Sbjct: 585 TLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKM 644
Query: 593 LKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMR 627
++ NG YV ++N+YA E W+++ R+R M+
Sbjct: 645 FMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMK 679
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 155/405 (38%), Gaps = 97/405 (23%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAY----IK 71
H A KSGL N LI YS L A LF +M ++ SWN +I AY ++
Sbjct: 174 HGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQ 233
Query: 72 AHNLTQARALFDSASHRDLVSYNSMLSAYAGAD--------------------------- 104
+T + +F+ V+ ++LSA+ +
Sbjct: 234 EEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSR 293
Query: 105 -GCDTVALDLFARMQSARDTI-------------------------------GMDEITLT 132
GC A L+A + +D+I +D + L
Sbjct: 294 CGCLVSAERLYA--SAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALV 351
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
+L+ K + G +H Y +K+ ++ LI MYSK +F
Sbjct: 352 GILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE- 410
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
L+S N++++ C + G+ A VF +
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQ-------------------------------M 439
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
M+ G+ + T+AS+L+ C+ L CL LGK +H L+N+ + FV + ++D Y KCGN
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGN 499
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 357
AESV+ I +S+I+GYS G +A + + E+
Sbjct: 500 EVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREK 544
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 149/500 (29%), Positives = 265/500 (53%), Gaps = 43/500 (8%)
Query: 147 GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACC 206
GK++H+ ++KT L+ ++ KCG A VF D + K + A
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVF-------DELPKPTLSA--- 102
Query: 207 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLA 266
+N +I+GY+++G ++ L L M G + + +TL+
Sbjct: 103 -----------------------YNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLS 139
Query: 267 SVLSAC-----TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA 321
VL A T + L + VHA ++K D + + + +VD Y K G + A +V+
Sbjct: 140 MVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFE 199
Query: 322 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS-QQCEAVFK 380
+ ++ +S+I+GY ++G + A+ +F++ ++ VV+ A+ G+ +S + +
Sbjct: 200 TMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVD 259
Query: 381 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMY 440
++ + P+ +V+GAC++ + +G+Q HA I+++ + K+ S+L+DMY
Sbjct: 260 MYISMQRA-GFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMY 318
Query: 441 SKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 500
+KCG I A + F + +++V + MI GY +G +A++LF M + ++P+ +T
Sbjct: 319 AKCGGINDARRVFDQM--QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 501 FVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
F+ LSAC H GLV+ G + F SM+ DY++ P++ HYAC+VD+ GR L KA EF R +
Sbjct: 377 FLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAM 436
Query: 561 PIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADN-GSRYVQLANVYAAEGKWNEM 619
P + D+ IW A L++C ++ N L A EL K+ AD Y+ L+NVYA+ KW+ +
Sbjct: 437 PERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNV 496
Query: 620 GRIRKEMRGKEATKLPGCSW 639
+IR+ M+ + +K G SW
Sbjct: 497 SKIREVMKRRRISKTIGRSW 516
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 184/396 (46%), Gaps = 39/396 (9%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H IK+G + +L+ L+ G L A ++FD++P ++N +I Y+K H L
Sbjct: 57 HADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK-HGL 115
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+ L LV S Y+G + D L + + ++R +TM+
Sbjct: 116 VKELLL--------LVQRMS----YSG-EKADGYTLSMVLKASNSRG---------STMI 153
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ R+V H+ ++K +L +++L+D Y K G A VF ++
Sbjct: 154 LPRSLCRLV------HARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD-ENV 206
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM-ERALTLFIEMI 254
V +M++ G ++ A +F + D V +N ++ G+ ++G +R++ ++I M
Sbjct: 207 VCCTSMISGYMNQGFVEDAEEIF-NTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQ 265
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
G N T ASV+ AC+ L ++G+ VHA ++K+ ++ + S ++D Y KCG +
Sbjct: 266 RAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIN 325
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALCSGYV 370
A V+ + K+ F+ +S+I GY GN +A LF + E NYV + S
Sbjct: 326 DARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACS 385
Query: 371 KSQQCEAVFKLFREFRTTEALIPDT---MIIVNVLG 403
S + +++F + ++ P IV+++G
Sbjct: 386 HSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMG 421
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 150/381 (39%), Gaps = 89/381 (23%)
Query: 279 KLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGY 338
K GK +HA ++K + +S ++ + KCG + YA V+ + + A + +I+GY
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 339 SSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 398
G K L + +Y A GY S +A R + ++P
Sbjct: 111 LKHG---LVKELLLLVQRMSYSGEKA--DGYTLSMVLKA-----SNSRGSTMILPR---- 156
Query: 399 VNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 458
SL + HA I++ + +D+ L +ALVD Y K G + A F+ + D
Sbjct: 157 -------------SLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD 203
Query: 459 SD-----------------------------RDVILYNVMIAGYAHHG-FENKAIQLFQE 488
+ +D+++YN M+ G++ G +++ ++
Sbjct: 204 ENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYIS 263
Query: 489 MLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM------------------------ 524
M + P+ TF +++ AC E+G++ +
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGG 323
Query: 525 ----KEDYNVLPE--IYHYACMVDMYGRGNQLEKAVE-FMRKIPIQIDATIWGAFLNACK 577
+ ++ + E ++ + M+D YG+ E+A+E F R +I+ + FL A
Sbjct: 324 INDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPN-YVTFLGALS 382
Query: 578 INNNTTLVKQAEEELLKVEAD 598
+++ LV + E ++ D
Sbjct: 383 ACSHSGLVDKGYEIFESMQRD 403
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 249 bits (635), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 244/441 (55%), Gaps = 8/441 (1%)
Query: 231 NTLIAGYVQNGYMERALTLFIEMIEKG--IEYNQHTLASVLSACTGLKCLKLGKCVHALV 288
N++I + ++ E++ + ++ G ++ + +T+ ++ ACTGL+ + G VH +
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMT 134
Query: 289 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 348
++ ++ V +G++ Y + G + V+ I ++++ + G++ A+
Sbjct: 135 IRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 349 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 408
+LF+ + ER+ + W A+ SGY + + +F E + + + +++VL AC
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVF-HLMQLEGVKVNGVAMISVLSACTQL 253
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 468
L G+ H+YI R K+ + +LA+ LVD+Y+KCG++ A + F + +++V ++
Sbjct: 254 GALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM--EEKNVYTWSS 311
Query: 469 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 528
+ G A +GF K ++LF M + + P+A+TFV++L C G V+ G++ F SM+ ++
Sbjct: 312 ALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEF 371
Query: 529 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQA 588
+ P++ HY C+VD+Y R +LE AV ++++P++ A +W + L+A ++ N L A
Sbjct: 372 GIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLA 431
Query: 589 EEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 648
+++L++E N YV L+N+YA W+ + +R+ M+ K K PGCS + V +H
Sbjct: 432 SKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHE 491
Query: 649 FTSGDTSHSK---ADAIYSTL 666
F GD SH K DA++ +
Sbjct: 492 FFVGDKSHPKYTQIDAVWKDI 512
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 192/445 (43%), Gaps = 74/445 (16%)
Query: 75 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
L A + D + L + NSM+ A+ + + + D + R+ S+ + + D T+ +
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEK-SFDFYRRILSSGNDLKPDNYTVNFL 114
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
+ LR+ G Q+H ++ D + LI +Y++ G + VF+ D
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIP-CPD 173
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
V + AMV AC R G + A +F PE D ++WN +I+GY Q G AL +F M
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPE-RDPIAWNAMISGYAQVGESREALNVFHLMQ 232
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
+G++ N + SVLSACT L L G+ H+ + +N +++ +VD Y KCG+M
Sbjct: 233 LEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDME 292
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 374
A V+ G+ K+ + SS + G + G ++
Sbjct: 293 KAMEVFWGMEEKNVYTWSSALNGLAMNGF----------------------------GEK 324
Query: 375 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA- 433
C +F L ++ + + P+ + V+VL C++ + G Q H +R + ++ +L
Sbjct: 325 CLELFSLMKQ----DGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNEFGIEPQLEH 379
Query: 434 -SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
LVD+Y++ G + A+ + Q+M
Sbjct: 380 YGCLVDLYARAGRL---------------------------------EDAVSIIQQM--- 403
Query: 493 SLKPDAITFVALLSACRHRGLVELG 517
+KP A + +LL A R +ELG
Sbjct: 404 PMKPHAAVWSSLLHASRMYKNLELG 428
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 40/323 (12%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H I+ G + LI LY+ G L HK+F+ +P + A++ A + ++
Sbjct: 131 HGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
AR LF+ RD +++N+M+S YA G AL++F MQ + + ++ + + ++L
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQV-GESREALNVFHLMQ--LEGVKVNGVAMISVL 247
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ +L + G+ HSY+ + ++ ++L+D+Y+KCG
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGD----------------- 290
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
M+ A+ VFW E N +W++ + G NG+ E+ L LF M +
Sbjct: 291 ---------------MEKAMEVFWGMEEKN-VYTWSSALNGLAMNGFGEKCLELFSLMKQ 334
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND-GCSNQFVSSG-IVDFYCKCGNM 313
G+ N T SVL C+ + + G+ H ++N+ G Q G +VD Y + G +
Sbjct: 335 DGVTPNAVTFVSVLRGCSVVGFVDEGQ-RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRL 393
Query: 314 RYAESVYAGIGIKSPFAT-SSLI 335
A S+ + +K A SSL+
Sbjct: 394 EDAVSIIQQMPMKPHAAVWSSLL 416
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 154/498 (30%), Positives = 250/498 (50%), Gaps = 37/498 (7%)
Query: 170 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS 229
+ MYSK G F A V+ G + +S N ++ R G + A VF + P+ T +
Sbjct: 1 MSMYSKLGDFPSAVAVY-GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLT-T 58
Query: 230 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 289
WN +IAG +Q + E L+LF EM G +++TL SV S GL+ + +G+ +H +
Sbjct: 59 WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI 118
Query: 290 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 349
K + V+S + Y + G ++ E V
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIV------------------------------ 148
Query: 350 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 409
S+ RN V W L G ++ E V L++ + + P+ + V VL +C+ A
Sbjct: 149 -IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKIS-GCRPNKITFVTVLSSCSDLA 206
Query: 410 TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVM 469
G+Q HA ++ + + S+L+ MYSKCG + A K+F D D ++++ M
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS--EREDEDEVMWSSM 264
Query: 470 IAGYAHHGFENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 528
I+ Y HG ++AI+LF M + +++ + + F+ LL AC H GL + G + F M E Y
Sbjct: 265 ISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKY 324
Query: 529 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQA 588
P + HY C+VD+ GR L++A +R +PI+ D IW L+AC I+ N + ++
Sbjct: 325 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 384
Query: 589 EEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 648
+E+L+++ ++ + YV LANV+A+ +W ++ +RK MR K K G SW + +H
Sbjct: 385 FKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQ 444
Query: 649 FTSGDTSHSKADAIYSTL 666
F GD S SK+ IYS L
Sbjct: 445 FKMGDRSQSKSKEIYSYL 462
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 204/492 (41%), Gaps = 88/492 (17%)
Query: 37 LYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSM 96
+YS G A ++ +M +N S N +I Y++A +L AR +FD R L ++N+M
Sbjct: 3 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 62
Query: 97 LSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVK 156
++ + + L LF M DE TL ++ + SA LR V G+Q+H Y +K
Sbjct: 63 IAGLIQFE-FNEEGLSLFREMHGL--GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 157 TANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALN 216
+L SSL MY + G +DG+
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKL---------------------------QDGE------ 146
Query: 217 VFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLK 276
+ ++ + V+WNTLI G QNG E L L+ M G N+ T +VLS+C+ L
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206
Query: 277 CLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIA 336
G+ +HA +K S V S ++ Y KCG +
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCL----------------------- 243
Query: 337 GYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTM 396
G+ KA F + + V+W+++ S Y Q + +LF + + +
Sbjct: 244 -----GDAAKA---FSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEV 295
Query: 397 IIVNVLGACAIQATLSLGKQ-----THAYILRTKLNMDEKLASALVDMYSKCGNIAYAE- 450
+N+L AC+ G + Y + L K + +VD+ + G + AE
Sbjct: 296 AFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL----KHYTCVVDLLGRAGCLDQAEA 351
Query: 451 --KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVAL---- 504
+S + T D++++ +++ H A ++F+E+L+I D+ +V L
Sbjct: 352 IIRSMPIKT----DIVIWKTLLSACNIHKNAEMAQRVFKEILQID-PNDSACYVLLANVH 406
Query: 505 LSACRHRGLVEL 516
SA R R + E+
Sbjct: 407 ASAKRWRDVSEV 418
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 263/509 (51%), Gaps = 38/509 (7%)
Query: 199 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 258
N + AC ++D+A++ + E N V +N L G+V + R+L L++ M+ +
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFV-YNALFKGFVTCSHPIRSLELYVRMLRDSV 867
Query: 259 EYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAES 318
+ +T +S++ A + + G+ + A + K + + + ++DFY G +R A
Sbjct: 868 SPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARK 925
Query: 319 VYAGIGIKSPFATSS-------------------------------LIAGYSSKGNMTKA 347
V+ + + A ++ LI GY GN+ +A
Sbjct: 926 VFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQA 985
Query: 348 KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAI 407
+ LF+ + ++ + WT + GY ++++ +F + E +IPD + + V+ ACA
Sbjct: 986 ESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM-MEEGIIPDEVTMSTVISACAH 1044
Query: 408 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 467
L +GK+ H Y L+ +D + SALVDMYSKCG++ A F +++ +N
Sbjct: 1045 LGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVF--FNLPKKNLFCWN 1102
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 527
+I G A HGF +A+++F +M S+KP+A+TFV++ +AC H GLV+ G + + SM +D
Sbjct: 1103 SIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDD 1162
Query: 528 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQ 587
Y+++ + HY MV ++ + + +A+E + + + +A IWGA L+ C+I+ N + +
Sbjct: 1163 YSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEI 1222
Query: 588 AEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKL-PGCSWIYVENGI 646
A +L+ +E N Y L ++YA + +W ++ IR MR K+ PG S I ++
Sbjct: 1223 AFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRD 1282
Query: 647 HVFTSGDTSHSKADAIYSTLVCLYGKLYL 675
H+F + D SHS +D + L +Y ++ L
Sbjct: 1283 HLFAAADKSHSASDEVCLLLDEIYDQMGL 1311
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 214/490 (43%), Gaps = 113/490 (23%)
Query: 110 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 169
+L+L+ RM RD++ T ++++ S+ +G+ + +++ K ++L
Sbjct: 855 SLELYVRM--LRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTL 910
Query: 170 IDMYSKCGSFREAYNVF---------------SGCDGVVDLVS----------KNAMVAA 204
ID YS G REA VF S V+D+ S KN +
Sbjct: 911 IDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSN 970
Query: 205 CCRDGKM-----DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 259
C +G M + A ++F + P D +SW T+I GY QN A+ +F +M+E+GI
Sbjct: 971 CLINGYMGLGNLEQAESLFNQMP-VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 1029
Query: 260 YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESV 319
++ T+++V+SAC L L++GK VH L+N + ++ S +VD Y KCG++ A V
Sbjct: 1030 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 1089
Query: 320 YAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVF 379
+ + K+ F +S+I G ++ G +A ++F +
Sbjct: 1090 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKME------------------------ 1125
Query: 380 KLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDM 439
E++ P+ + V+V AC THA + ++ ++ +++D
Sbjct: 1126 --------MESVKPNAVTFVSVFTAC-----------THAGL----VDEGRRIYRSMIDD 1162
Query: 440 YSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAI 499
YS N+ + Y M+ ++ G +A++L M +P+A+
Sbjct: 1163 YSIVSNVEH-----------------YGGMVHLFSKAGLIYEALELIGNM---EFEPNAV 1202
Query: 500 TFVALLSACR-HRGLVELGEKFFMSMKEDYNVLPEIY--HYACMVDMYGRGNQLEKAVEF 556
+ ALL CR H+ LV + E F + VL + +Y +V MY N+ E
Sbjct: 1203 IWGALLDGCRIHKNLV-IAEIAFNKLM----VLEPMNSGYYFLLVSMYAEQNRWRDVAEI 1257
Query: 557 ---MRKIPIQ 563
MR++ I+
Sbjct: 1258 RGRMRELGIE 1267
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 226/369 (61%), Gaps = 10/369 (2%)
Query: 311 GNMRYAESVYAGIGIKSPFAT-----SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTAL 365
++R E++++ + I+S F + +SL+ Y++ G++ A ++FD + E++ V W ++
Sbjct: 2 ADVRLGETIHSVV-IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 366 CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 425
+G+ ++ + E L+ E ++ + PD IV++L ACA L+LGK+ H Y+++
Sbjct: 61 INGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 426 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 485
L + ++ L+D+Y++CG + A+ F + D ++ + + +I G A +GF +AI+L
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD--KNSVSWTSLIVGLAVNGFGKEAIEL 177
Query: 486 FQEMLKIS-LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY 544
F+ M L P ITFV +L AC H G+V+ G ++F M+E+Y + P I H+ CMVD+
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 545 GRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYV 604
R Q++KA E+++ +P+Q + IW L AC ++ ++ L + A ++L++E ++ YV
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 297
Query: 605 QLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYS 664
L+N+YA+E +W+++ +IRK+M K+PG S + V N +H F GD SH ++DAIY+
Sbjct: 298 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 357
Query: 665 TLVCLYGKL 673
L + G+L
Sbjct: 358 KLKEMTGRL 366
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 160/366 (43%), Gaps = 78/366 (21%)
Query: 147 GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACC 206
G+ +HS ++++ + +SL+ +Y+ CG AY VF
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD------------------- 47
Query: 207 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLA 266
K PE D V+WN++I G+ +NG E AL L+ EM KGI+ + T+
Sbjct: 48 -------------KMPE-KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIV 93
Query: 267 SVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 326
S+LSAC + L LGK VH ++K N S+ ++D Y +CG + A
Sbjct: 94 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA---------- 143
Query: 327 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 386
K LFD + ++N V WT+L G + + +LF+
Sbjct: 144 ---------------------KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 387 TTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI--LRTKLNMDEKLA--SALVDMYSK 442
+TE L+P + V +L AC + + K+ Y +R + ++ ++ +VD+ ++
Sbjct: 183 STEGLLPCEITFVGILYAC---SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 443 CGNIAYAEKSFQLVT--DSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 500
G + +K+++ + +V+++ ++ HG + + F + + L+P+
Sbjct: 240 AGQV---KKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPNHSG 294
Query: 501 FVALLS 506
LLS
Sbjct: 295 DYVLLS 300
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 115/267 (43%), Gaps = 68/267 (25%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H I+SG S I+ N L+HLY+ G + A+K+FDKMP ++ +WN++I +
Sbjct: 11 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF------ 64
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+G AL L+ M S I D T+ ++L
Sbjct: 65 --------------------------AENGKPEEALALYTEMNS--KGIKPDGFTIVSLL 96
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ AK+ + GK++H YM+K + + + L+D+Y++CG EA +F ++
Sbjct: 97 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFD------EM 150
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
V KN +VSW +LI G NG+ + A+ LF M
Sbjct: 151 VDKN---------------------------SVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 256 -KGIEYNQHTLASVLSACTGLKCLKLG 281
+G+ + T +L AC+ +K G
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEG 210
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 241/466 (51%), Gaps = 50/466 (10%)
Query: 223 EFNDTVSWNTLIAGYVQN-GYMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKL 280
E + + WNTLI + E A L+ +M+E+G ++HT VL AC +
Sbjct: 110 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE 169
Query: 281 GKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSS 340
GK VH ++K+ + +V++G++ Y CG + A
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLA------------------------ 205
Query: 341 KGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVN 400
+++FD + ER+ V W ++ V+ + ++ +LFRE + + PD + +
Sbjct: 206 -------RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ--RSFEPDGYTMQS 256
Query: 401 VLGACAIQATLSLGKQTHAYILR---TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVT 457
VL ACA +LSLG HA++LR + MD + ++L++MY KCG++ AE+ FQ +
Sbjct: 257 VLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM- 315
Query: 458 DSDRDVILYNVMIAGYAHHGFENKAIQLFQEML--KISLKPDAITFVALLSACRHRGLVE 515
RD+ +N MI G+A HG +A+ F M+ + +++P+++TFV LL AC HRG V
Sbjct: 316 -QKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVN 374
Query: 516 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
G ++F M DY + P + HY C+VD+ R + +A++ + +P++ DA IW + L+A
Sbjct: 375 KGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 434
Query: 576 -CKINNNTTLVKQAEEELLKVEADNGSR-------YVQLANVYAAEGKWNEMGRIRKEMR 627
CK + L ++ ++ + DN S YV L+ VYA+ +WN++G +RK M
Sbjct: 435 CCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMS 494
Query: 628 GKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL 673
K PGCS I + H F +GDTSH + IY L + +L
Sbjct: 495 EHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRL 540
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 118/510 (23%), Positives = 203/510 (39%), Gaps = 138/510 (27%)
Query: 25 ASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDS 84
+++F +++ L S + A ++FD + + ++F WN +I A AH++++ F
Sbjct: 80 PATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC--AHDVSRKEEAF-- 135
Query: 85 ASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVV 144
+ Y ML R D+ T +L A +
Sbjct: 136 ------MLYRKMLE----------------------RGESSPDKHTFPFVLKACAYIFGF 167
Query: 145 CYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAA 204
GKQ+H +VK + + LI +Y CG A VF LVS N+M+ A
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPE-RSLVSWNSMIDA 226
Query: 205 CCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHT 264
R G+ D AL LF EM ++ E + +T
Sbjct: 227 LVRFGEYDSALQ--------------------------------LFREM-QRSFEPDGYT 253
Query: 265 LASVLSACTGLKCLKLGKCVHALVLKN---DGCSNQFVSSGIVDFYCKCGNMRYAESVYA 321
+ SVLSAC GL L LG HA +L+ D + V + +++ YCKCG++R AE V+
Sbjct: 254 MQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQ 313
Query: 322 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKL 381
G+ + + +++I G+++ G +A FD + ++
Sbjct: 314 GMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR----------------------- 350
Query: 382 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYS 441
E + P+++ V +L AC + ++ G+Q ++R D + AL
Sbjct: 351 -------ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-----DYCIEPALEH--- 395
Query: 442 KCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITF 501
Y ++ A G+ +AI + ++ + +KPDA+ +
Sbjct: 396 ------------------------YGCIVDLIARAGYITEAIDM---VMSMPMKPDAVIW 428
Query: 502 VALLSACRHRGL-VELGEKF---FMSMKED 527
+LL AC +G VEL E+ + KED
Sbjct: 429 RSLLDACCKKGASVELSEEIARNIIGTKED 458
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 11/240 (4%)
Query: 339 SSKGNMTKAKRLFDSLSERNYVVWTAL---CSGYVKSQQCEAVFKLFREFRTTEALIPDT 395
SS ++ A R+FDS+ + +W L C+ V + E F L+R+ PD
Sbjct: 94 SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRK--EEAFMLYRKMLERGESSPDK 151
Query: 396 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 455
VL ACA S GKQ H I++ D + + L+ +Y CG + A K F
Sbjct: 152 HTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE 211
Query: 456 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 515
+ +R ++ +N MI G + A+QLF+EM + S +PD T ++LSAC G +
Sbjct: 212 MP--ERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLS 268
Query: 516 LGE--KFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFL 573
LG F+ K D +V ++ +++MY + L A + + + + D W A +
Sbjct: 269 LGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR-DLASWNAMI 327
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 112/258 (43%), Gaps = 49/258 (18%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H Q +K G ++ N LIHLY G L
Sbjct: 174 HCQIVKHGFGGDVYVNNGLIHLYGSCGCLD------------------------------ 203
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
AR +FD R LVS+NSM+ A D+ AL LF MQ + + D T+ ++L
Sbjct: 204 -LARKVFDEMPERSLVSWNSMIDALVRFGEYDS-ALQLFREMQRSFEP---DGYTMQSVL 258
Query: 136 NLSAKLRVVCYGKQMHSYMVKTAN-DLSKFAL--SSLIDMYSKCGSFREAYNVFSGCDGV 192
+ A L + G H+++++ + D++ L +SLI+MY KCGS R A VF G
Sbjct: 259 SACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR 318
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNT------LIA----GYVQNGY 242
DL S NAM+ G+ + A+N F + + + V N+ LIA G+V G
Sbjct: 319 -DLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGR 377
Query: 243 MERALTLFIEMIEKGIEY 260
+ + IE +E+
Sbjct: 378 QYFDMMVRDYCIEPALEH 395
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 223/414 (53%), Gaps = 36/414 (8%)
Query: 257 GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 316
G ++ + L+S + +C + + G H L LK F+S
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGG-----FISD--------------- 154
Query: 317 ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE 376
VY G SSL+ Y G + A ++F+ + ERN V WTA+ SG+ + + +
Sbjct: 155 --VYLG---------SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVD 203
Query: 377 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 436
KL+ + R + + P+ +L AC L G+ H L L ++++L
Sbjct: 204 ICLKLYSKMRKSTS-DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSL 262
Query: 437 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML-KISLK 495
+ MY KCG++ A + F S++DV+ +N MIAGYA HG +AI+LF+ M+ K K
Sbjct: 263 ISMYCKCGDLKDAFRIFDQF--SNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTK 320
Query: 496 PDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVE 555
PDAIT++ +LS+CRH GLV+ G KFF M E + + PE+ HY+C+VD+ GR L++A+E
Sbjct: 321 PDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALE 379
Query: 556 FMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGK 615
+ +P++ ++ IWG+ L +C+++ + +A EE L +E D + +VQLAN+YA+ G
Sbjct: 380 LIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGY 439
Query: 616 WNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCL 669
W E +RK M+ K PGCSWI + N + +F + D S+ + I L CL
Sbjct: 440 WKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCL 493
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 129/312 (41%), Gaps = 69/312 (22%)
Query: 207 RD-GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTL 265
RD G+++ A VF + PE N VSW +I+G+ Q ++ L L+ +M + + N +T
Sbjct: 166 RDSGEVENAYKVFEEMPERN-VVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 266 ASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGI 325
++LSACTG L G+ VH L S +S+ ++ YCKCG+++ A ++
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 326 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 385
K + +S+IAGY+ G +A LF+ + ++
Sbjct: 285 KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKS--------------------------- 317
Query: 386 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 445
PD + + VL +C + G++ + L + S LVD+ +
Sbjct: 318 ----GTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGR--- 370
Query: 446 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 505
G +A++L + M +KP+++ + +LL
Sbjct: 371 ------------------------------FGLLQEALELIENM---PMKPNSVIWGSLL 397
Query: 506 SACRHRGLVELG 517
+CR G V G
Sbjct: 398 FSCRVHGDVWTG 409
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 68/268 (25%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H A+K G S ++ + L+ LY G ++ A+K+F++MP RN SW A+I + + +
Sbjct: 143 HCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRV 202
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+ L L+++M+ + T ++ T T +L
Sbjct: 203 --------------------------------DICLKLYSKMR--KSTSDPNDYTFTALL 228
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + G+ +H + +SLI MY KCG ++A+ +F D
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIF-------DQ 281
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
S +V SWN++IAGY Q+G +A+ LF M+
Sbjct: 282 FSNKDVV--------------------------SWNSMIAGYAQHGLAMQAIELFELMMP 315
Query: 256 K-GIEYNQHTLASVLSACTGLKCLKLGK 282
K G + + T VLS+C +K G+
Sbjct: 316 KSGTKPDAITYLGVLSSCRHAGLVKEGR 343
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 165/580 (28%), Positives = 275/580 (47%), Gaps = 82/580 (14%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
+++ Y K L A LF + RD+VS+++M+++Y A D A+ LF M R
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDE-AISLFRDMM--RI 395
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
I + +TLT++L A + GK +H Y +K + +++I MY+KCG F A
Sbjct: 396 HIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPA 455
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
L F + P D V++N L GY Q G
Sbjct: 456 --------------------------------LKAFERLP-IKDAVAFNALAQGYTQIGD 482
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
+A ++ M G+ + T+ +L C G CV+ ++K+ S V+
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHA 542
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
+++ + KC + A ++ G E++ V W
Sbjct: 543 LINMFTKCDALAAAIVLFDKCGF------------------------------EKSTVSW 572
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
+ +GY+ Q E FR+ + E P+ + VN++ A A + L +G H+ ++
Sbjct: 573 NIMMNGYLLHGQAEEAVATFRQMKV-EKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLI 631
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
+ + ++LVDMY+KCG I +EK F + S++ ++ +N M++ YA HG + A
Sbjct: 632 QCGFCSQTPVGNSLVDMYAKCGMIESSEKCF--IEISNKYIVSWNTMLSAYAAHGLASCA 689
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 542
+ LF M + LKPD+++F+++LSACRH GLVE G++ F M E + + E+ HYACMVD
Sbjct: 690 VSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVD 749
Query: 543 MYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 602
+ G+ +AVE MR++ ++ +WGA LN+ +++ N L A +L+K+E N S
Sbjct: 750 LLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH 809
Query: 603 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYV 642
Y Q + G+ N + RI+ K+P CSWI V
Sbjct: 810 YSQDRRL----GEVNNVSRIK---------KVPACSWIEV 836
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/561 (23%), Positives = 235/561 (41%), Gaps = 106/561 (18%)
Query: 13 YRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKA 72
+R +Q S + S + NQLI+ YS+ + +FD + WN++I Y +A
Sbjct: 18 FRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRA 77
Query: 73 HNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLT 132
HR+ + + +S G D D+ + T
Sbjct: 78 ------------GLHREALGFFGYMSEEKGIDP---------------------DKYSFT 104
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
L A G ++H + + + + ++L++MY K A VF
Sbjct: 105 FALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFD----- 159
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
KM + V W NT+++G QNG AL LF +
Sbjct: 160 -----------------KMHVKDVVTW-----------NTMVSGLAQNGCSSAALLLFHD 191
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
M ++ + +L +++ A + L+ + +C+H LV+K G F SSG++D YC C +
Sbjct: 192 MRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKK-GFIFAF-SSGLIDMYCNCAD 249
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
+ AESV+ + K + +++A Y+ G + LFD + RNY
Sbjct: 250 LYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM--RNY------------- 294
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
+ R + + +G L G H Y ++ L D +
Sbjct: 295 -----------DVRMNKVAAASALQAAAYVG------DLVKGIAIHDYAVQQGLIGDVSV 337
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
A++L+ MYSKCG + AE+ F + DRDV+ ++ MIA Y G ++AI LF++M++I
Sbjct: 338 ATSLMSMYSKCGELEIAEQLF--INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRI 395
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLE 551
+KP+A+T ++L C LG+ ++K D + E+ ++ MY + +
Sbjct: 396 HIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD--IESELETATAVISMYAKCGRFS 453
Query: 552 KAVEFMRKIPIQIDATIWGAF 572
A++ ++PI+ DA + A
Sbjct: 454 PALKAFERLPIK-DAVAFNAL 473
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 185/451 (41%), Gaps = 86/451 (19%)
Query: 167 SSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF--WKNPEF 224
++L+ M +C +FR V G V L N ++ A + D++ +F ++P
Sbjct: 6 TNLLLMLRECKNFRCLLQV-HGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDP-- 62
Query: 225 NDTVSWNTLIAGYVQNGYMERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKC 283
V WN++I GY + G AL F M E KGI+ ++++ L AC G K G
Sbjct: 63 -GVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLR 121
Query: 284 VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 343
+H L+ + S+ ++ + +V+ YCK ++ A V
Sbjct: 122 IHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQV------------------------ 157
Query: 344 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 403
FD + ++ V W + SG ++ A LF + R+ I D + + N++
Sbjct: 158 -------FDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDI-DHVSLYNLIP 209
Query: 404 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 463
A + + + H +++ +S L+DMY C ++ AE F+ V D
Sbjct: 210 AVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESVFEEVWRKDESS 267
Query: 464 ILYNVMIAGYAHHGFENKAIQLFQEM---------------------------------- 489
+ M+A YAH+GF + ++LF M
Sbjct: 268 --WGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDY 325
Query: 490 -LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGN 548
++ L D +L+S G +E+ E+ F+++ ED +V+ ++ M+ Y +
Sbjct: 326 AVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINI-EDRDVVS----WSAMIASYEQAG 380
Query: 549 QLEKAVEFMR---KIPIQIDATIWGAFLNAC 576
Q ++A+ R +I I+ +A + L C
Sbjct: 381 QHDEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 200/365 (54%), Gaps = 3/365 (0%)
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
++ Y + GNM A S++ + + + ++++ GY++ G+M +R+FD + ERN W
Sbjct: 96 MISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSW 155
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
L GY ++ + V F+ +++P+ + VL ACA GK H Y
Sbjct: 156 NGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGE 215
Query: 423 RTKLN-MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 481
N +D + +AL+DMY KCG I A + F+ + RD+I +N MI G A HG +
Sbjct: 216 TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI--KRRDLISWNTMINGLAAHGHGTE 273
Query: 482 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 541
A+ LF EM + PD +TFV +L AC+H GLVE G +F SM D++++PEI H C+V
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 333
Query: 542 DMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 601
D+ R L +AVEF+ K+P++ DA IW L A K+ + + A EEL+K+E N +
Sbjct: 334 DLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPA 393
Query: 602 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADA 661
+V L+N+Y G++++ R++ MR K G SWI ++G+ F S H + +
Sbjct: 394 NFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEE 453
Query: 662 IYSTL 666
+ L
Sbjct: 454 LQRIL 458
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 109/255 (42%), Gaps = 36/255 (14%)
Query: 28 IFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASH 87
I N +I Y G + EA LFD+MP R+ SWN ++ Y ++ +FD
Sbjct: 90 IVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPE 149
Query: 88 RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYG 147
R++ S+N ++ YA +G + L F RM + D T+T +L+ AKL +G
Sbjct: 150 RNVFSWNGLIKGYA-QNGRVSEVLGSFKRMVDEGSVVPNDA-TMTLVLSACAKLGAFDFG 207
Query: 148 KQMHSYMVKTA-NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACC 206
K +H Y N + ++LIDMY KCG+ A VF G DL+S N M
Sbjct: 208 KWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR-RDLISWNTM----- 261
Query: 207 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLA 266
I G +G+ AL LF EM GI ++ T
Sbjct: 262 ---------------------------INGLAAHGHGTEALNLFHEMKNSGISPDKVTFV 294
Query: 267 SVLSACTGLKCLKLG 281
VL AC + ++ G
Sbjct: 295 GVLCACKHMGLVEDG 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 120/250 (48%), Gaps = 27/250 (10%)
Query: 342 GNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNV 401
G + A ++F + E+N V+WT++ +GY+ ++ + + F L P+ I V
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD-------LSPERDI---V 91
Query: 402 LGACAIQATLSLGKQTHAYILRTKLNMDEKLA-SALVDMYSKCGNIAYAEKSFQLVTDSD 460
L I + +G A L ++ + ++ + +++ Y+ G++ E+ F + +
Sbjct: 92 LWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDM--PE 149
Query: 461 RDVILYNVMIAGYAHHGFENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGE- 518
R+V +N +I GYA +G ++ + F+ M+ + S+ P+ T +LSAC G + G+
Sbjct: 150 RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKW 209
Query: 519 --KFFMSM---KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFL 573
K+ ++ K D NV ++DMYG+ +E A+E + I + D W +
Sbjct: 210 VHKYGETLGYNKVDVNV------KNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMI 262
Query: 574 NACKINNNTT 583
N + + T
Sbjct: 263 NGLAAHGHGT 272
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 167/598 (27%), Positives = 299/598 (50%), Gaps = 83/598 (13%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N+I+ Y + +L+ AR LFD S RD++S++ ++ +Y + V L LF M
Sbjct: 164 NSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKE-PVVGLKLFKEMVHEAK 221
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK-FALSSLIDMYSKCGSFRE 181
T D +T+T++L + + G+ +H + ++ DL+ F +SLIDMYSK
Sbjct: 222 T-EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDS 280
Query: 182 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 241
A+ VF CR+ VSWN+++AG+V N
Sbjct: 281 AFRVFD---------------ETTCRN------------------IVSWNSILAGFVHNQ 307
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 301
+ AL +F M+++ +E ++ T+ S+L C + K +H ++++ SN+
Sbjct: 308 RYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEV--- 364
Query: 302 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 361
A SSLI Y+S + A + DS++ ++ V
Sbjct: 365 ----------------------------ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVS 396
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
+ + SG + + + +F R T P+ + ++++L AC++ A L K H
Sbjct: 397 CSTMISGLAHAGRSDEAISIFCHMRDT----PNAITVISLLNACSVSADLRTSKWAHGIA 452
Query: 422 LRTKLNM-DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 480
+R L + D + +++VD Y+KCG I A ++F +T+ +++I + V+I+ YA +G +
Sbjct: 453 IRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITE--KNIISWTVIISAYAINGLPD 510
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM-KEDYNVLPEIYHYAC 539
KA+ LF EM + P+A+T++A LSAC H GLV+ G F SM +ED+ P + HY+C
Sbjct: 511 KALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK--PSLQHYSC 568
Query: 540 MVDMYGRGNQLEKAVEFMRKIP--IQIDATIWGAFLNACKINNNTTLVKQAE--EELLKV 595
+VDM R +++ AVE ++ +P ++ A+ WGA L+ C+ N L+ +E E+L++
Sbjct: 569 IVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCR-NRFKKLIITSEVVAEVLEL 627
Query: 596 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 653
E S Y+ ++ +AAE W ++ +R+ ++ ++ + G S + N F +GD
Sbjct: 628 EPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGD 685
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 178/430 (41%), Gaps = 88/430 (20%)
Query: 39 SIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLS 98
S+HG + FD + F N++I Y K ++ A +FD + R++VS+NS+L+
Sbjct: 247 SVHGF--SIRRGFDLA---DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILA 301
Query: 99 AYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTA 158
+ D AL++F M ++ + +DE+T+ ++L + K +H +++
Sbjct: 302 GFVHNQRYDE-ALEMFHLM--VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 159 NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF 218
+ ++ ALSSLID Y+ C +A V D+VS + M++ G+ D A+++F
Sbjct: 359 YESNEVALSSLIDAYTSCSLVDDAGTVLDSMT-YKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 219 WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL 278
DT N T+ S+L+AC+ L
Sbjct: 418 ---CHMRDTP--------------------------------NAITVISLLNACSVSADL 442
Query: 279 KLGKCVHALVLKNDGCSNQF-VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG 337
+ K H + ++ N V + IVD Y KCG +
Sbjct: 443 RTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEM---------------------- 480
Query: 338 YSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI 397
A+R FD ++E+N + WT + S Y + + LF E + + P+ +
Sbjct: 481 ---------ARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMK-QKGYTPNAVT 530
Query: 398 IVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA----SALVDMYSKCGNIAYAEKSF 453
+ L AC + G I ++ + D K + S +VDM S+ G I + +
Sbjct: 531 YLAALSACNHGGLVKKG----LMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEI---DTAV 583
Query: 454 QLVTDSDRDV 463
+L+ + DV
Sbjct: 584 ELIKNLPEDV 593
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 56/291 (19%)
Query: 32 NQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLV 91
Q + SIHG++ + N + +++I AY + A + DS +++D+V
Sbjct: 342 EQPLPCKSIHGVI------IRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVV 395
Query: 92 SYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLN---LSAKLRVVCYGK 148
S ++M+S A A D A+ +F M RDT + IT+ ++LN +SA LR K
Sbjct: 396 SCSTMISGLAHAGRSDE-AISIFCHM---RDT--PNAITVISLLNACSVSADLRT---SK 446
Query: 149 QMHSYMVKTA---NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAAC 205
H ++ + ND+S +S++D Y+KCG+ A F + KN
Sbjct: 447 WAHGIAIRRSLAINDIS--VGTSIVDAYAKCGAIEMARRTFD------QITEKN------ 492
Query: 206 CRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTL 265
+SW +I+ Y NG ++AL LF EM +KG N T
Sbjct: 493 ---------------------IISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTY 531
Query: 266 ASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 316
+ LSAC +K G + +++ D + S IVD + G + A
Sbjct: 532 LAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTA 582
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 120/257 (46%), Gaps = 25/257 (9%)
Query: 315 YAESVYAGIGIKSPFA----------TSSLIAG------YSSKGNMTKAKRLFDSLSERN 358
Y+E AG+ PF S L G Y G++ R FD ++ R+
Sbjct: 32 YSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRD 91
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
V W + G + E F + R P+T +V V+ AC ++ G++ H
Sbjct: 92 SVSWNVIVFGLLDYGFEEEGLWWFSKLRVW-GFEPNTSTLVLVIHAC--RSLWFDGEKIH 148
Query: 419 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 478
Y++R+ + ++++ MY+ +++ A K F + S+RDVI ++V+I Y
Sbjct: 149 GYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEM--SERDVISWSVVIRSYVQSKE 205
Query: 479 ENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYH 536
++LF+EM+ + +PD +T ++L AC +++G S++ ++ L +++
Sbjct: 206 PVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFD-LADVFV 264
Query: 537 YACMVDMYGRGNQLEKA 553
++DMY +G ++ A
Sbjct: 265 CNSLIDMYSKGFDVDSA 281
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 246/469 (52%), Gaps = 37/469 (7%)
Query: 201 MVAACCRDG---KMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG 257
++A C G M+ A ++F + + T +NT+I GYV E AL + EM+++G
Sbjct: 69 VLAKCAHSGWENSMNYAASIF-RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRG 127
Query: 258 IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 317
E + T +L ACT LK ++ GK +H V K ++ FV + +++ Y +CG M +
Sbjct: 128 NEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSS 187
Query: 318 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 377
+V+ + K+ + SS+++ + G +W+ +C
Sbjct: 188 AVFEKLESKTAASWSSMVSARAGMG------------------MWS----------EC-- 217
Query: 378 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 437
LFR + L + +V+ L ACA L+LG H ++LR ++ + ++LV
Sbjct: 218 -LLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLV 276
Query: 438 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 497
DMY KCG + A FQ + R+ + Y+ MI+G A HG A+++F +M+K L+PD
Sbjct: 277 DMYVKCGCLDKALHIFQKM--EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPD 334
Query: 498 AITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFM 557
+ +V++L+AC H GLV+ G + F M ++ V P HY C+VD+ GR LE+A+E +
Sbjct: 335 HVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETI 394
Query: 558 RKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWN 617
+ IPI+ + IW FL+ C++ N L + A +ELLK+ + N Y+ ++N+Y+ W+
Sbjct: 395 QSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWD 454
Query: 618 EMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
++ R R E+ K + PG S + ++ H F S D SH K IY L
Sbjct: 455 DVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKML 503
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 163/423 (38%), Gaps = 71/423 (16%)
Query: 73 HNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLT 132
+++ A ++F +N+M+ Y + MQ + D T
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEP---DNFTYP 136
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
+L +L+ + GKQ+H + K + F +SLI+MY +CG + VF
Sbjct: 137 CLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFE----- 191
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
L SK A SW+++++ G L LF
Sbjct: 192 -KLESKTA---------------------------ASWSSMVSARAGMGMWSECLLLFRG 223
Query: 253 MI-EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCG 311
M E ++ + + S L AC L LG +H +L+N N V + +VD Y KC
Sbjct: 224 MCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKC- 282
Query: 312 NMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK 371
G + KA +F + +RN + ++A+ SG
Sbjct: 283 ------------------------------GCLDKALHIFQKMEKRNNLTYSAMISGLAL 312
Query: 372 SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT-KLNMDE 430
+ E+ ++F + E L PD ++ V+VL AC+ + G++ A +L+ K+
Sbjct: 313 HGEGESALRMFSKM-IKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTA 371
Query: 431 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
+ LVD+ + G + A ++ Q + DVI + E I QE+L
Sbjct: 372 EHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAA-QELL 430
Query: 491 KIS 493
K+S
Sbjct: 431 KLS 433
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 134/312 (42%), Gaps = 67/312 (21%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H Q K GL + +F N LI++Y G ++ + +F+K+ + A SW+
Sbjct: 155 HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWS------------ 202
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
SM+SA AG G + L LF M S + + +E + + L
Sbjct: 203 -------------------SMVSARAGM-GMWSECLLLFRGMCSETN-LKAEESGMVSAL 241
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
A + G +H ++++ ++L+ +SL+DMY KCG
Sbjct: 242 LACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGC----------------- 284
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+D AL++F K + N+ ++++ +I+G +G E AL +F +MI+
Sbjct: 285 ---------------LDKALHIFQKMEKRNN-LTYSAMISGLALHGEGESALRMFSKMIK 328
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYCKCGNMR 314
+G+E + SVL+AC+ +K G+ V A +LK G +VD + G +
Sbjct: 329 EGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLE 388
Query: 315 YAESVYAGIGIK 326
A I I+
Sbjct: 389 EALETIQSIPIE 400
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 178/615 (28%), Positives = 295/615 (47%), Gaps = 77/615 (12%)
Query: 57 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 116
+N N +I Y K N+ AR +FD+ R++VS+ ++++ Y A G + LF+
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQA-GNEQEGFCLFSS 152
Query: 117 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 176
M S +E TL+++L S + GKQ+H +K S + +++I MY +C
Sbjct: 153 MLS---HCFPNEFTLSSVLT-SCRYEP---GKQVHGLALKLGLHCSIYVANAVISMYGRC 205
Query: 177 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 236
AY ++ + + +F + V+WN++IA
Sbjct: 206 HDGAAAYEAWTVFEAI------------------------------KFKNLVTWNSMIAA 235
Query: 237 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 296
+ ++A+ +F+ M G+ +++ TL ++ CS+
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI-------------------------CSS 270
Query: 297 QFVSSGIV-DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSK-GNMTKAKRLFDSL 354
+ SS +V + KC ++ +V +G+ ++ AT+ LI YS + T +LF +
Sbjct: 271 LYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATA-LIKVYSEMLEDYTDCYKLFMEM 329
Query: 355 SE-RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 413
S R+ V W + + + E LF + R E L PD +VL ACA T
Sbjct: 330 SHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQ-EKLSPDWYTFSSVLKACAGLVTARH 387
Query: 414 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD-RDVILYNVMIAG 472
HA +++ D L ++L+ Y+KCG++ + F D D RDV+ +N M+
Sbjct: 388 ALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFD---DMDSRDVVSWNSMLKA 444
Query: 473 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 532
Y+ HG + + +FQ+M + PD+ TF+ALLSAC H G VE G + F SM E LP
Sbjct: 445 YSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLP 501
Query: 533 EIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEEL 592
++ HYAC++DM R + +A E ++++P+ DA +W A L +C+ + NT L K A ++L
Sbjct: 502 QLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKL 561
Query: 593 LK-VEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTS 651
+ VE N Y+Q++N+Y AEG +NE KEM K P SW + N +H F S
Sbjct: 562 KELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFAS 621
Query: 652 GDTSHSKADAIYSTL 666
G +A+Y L
Sbjct: 622 GGRHRPDKEAVYREL 636
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 44/274 (16%)
Query: 238 VQNGYMERALTLFIEMIEKGIEY-NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 296
V++G + RA++LF +E +Q A++ AC + L G +H +L + C +
Sbjct: 37 VRSGDIRRAVSLFYS---APVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYS 93
Query: 297 QFV--SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 354
Q V ++ +++ Y KCGN+ YA +++FD++
Sbjct: 94 QNVILANFLINMYAKCGNILYA-------------------------------RQVFDTM 122
Query: 355 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 414
ERN V WTAL +GYV++ + F LF + P+ + +VL +C + G
Sbjct: 123 PERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH--CFPNEFTLSSVLTSCRYEP----G 176
Query: 415 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD-RDVILYNVMIAGY 473
KQ H L+ L+ +A+A++ MY +C + A A +++ + ++++ +N MIA +
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 474 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 507
KAI +F M + D T + + S+
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 227/426 (53%), Gaps = 7/426 (1%)
Query: 246 ALTLFIEMIEKGIEYNQHTLAS-VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 304
A + F M+ + + H + VL + L VH + K+ V + ++
Sbjct: 109 AFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALL 168
Query: 305 DFYCK-CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 363
Y ++ A ++ + ++ + +++++GY+ G+++ A LF+ + ER+ W
Sbjct: 169 HSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWN 228
Query: 364 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 423
A+ + ++ LFR ++ P+ + +V VL ACA TL L K HA+ R
Sbjct: 229 AILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYR 288
Query: 424 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 483
L+ D ++++LVD+Y KCGN+ A F++ S + + +N MI +A HG +AI
Sbjct: 289 RDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA--SKKSLTAWNSMINCFALHGRSEEAI 346
Query: 484 QLFQEMLKISL---KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 540
+F+EM+K+++ KPD ITF+ LL+AC H GLV G +F M + + P I HY C+
Sbjct: 347 AVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCL 406
Query: 541 VDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 600
+D+ GR + ++A+E M + ++ D IWG+ LNACKI+ + L + A + L+ + +NG
Sbjct: 407 IDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNG 466
Query: 601 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKAD 660
+AN+Y G W E R RK ++ + A K PG S I ++N +H F S D SH + +
Sbjct: 467 GYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETE 526
Query: 661 AIYSTL 666
IY L
Sbjct: 527 EIYMIL 532
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 208/488 (42%), Gaps = 82/488 (16%)
Query: 74 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
NL+ AR +FD S + Y ++L+AY+ + + F R+ R +
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF----REAYNVFSGC 189
+L + L +H+++ K+ L ++L+ Y+ S R+ ++ S
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSE- 190
Query: 190 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 249
++VS AM++ R G + A+ +F PE D SWN ++A QNG A++L
Sbjct: 191 ---RNVVSWTAMLSGYARSGDISNAVALFEDMPE-RDVPSWNAILAACTQNGLFLEAVSL 246
Query: 250 FIEMI-EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 308
F MI E I N+ T+ VLSAC L+L K +HA + D S+ FVS+ +VD Y
Sbjct: 247 FRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYG 306
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 368
KCGN+ A SV+ KS A +S+I ++ G
Sbjct: 307 KCGNLEEASSVFKMASKKSLTAWNSMINCFALHG-------------------------- 340
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 428
+S++ AVF+ + + + PD + + +L AC +S G+ + ++ + +
Sbjct: 341 --RSEEAIAVFEEMMKLNIND-IKPDHITFIGLLNACTHGGLVSKGR-GYFDLMTNRFGI 396
Query: 429 DEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLF 486
+ ++ L+D+ + G ++A+++
Sbjct: 397 EPRIEHYGCLIDLLGRAGRF---------------------------------DEALEVM 423
Query: 487 QEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY-ACMVDMYG 545
M +K D + +LL+AC+ G ++L E +++K + P Y A M ++YG
Sbjct: 424 STM---KMKADEAIWGSLLNACKIHGHLDLAE---VAVKNLVALNPNNGGYVAMMANLYG 477
Query: 546 RGNQLEKA 553
E+A
Sbjct: 478 EMGNWEEA 485
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 44/319 (13%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLY-SIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHN 74
H KSG + L+H Y S + A +LFD+M RN SW A++ Y ++ +
Sbjct: 149 HTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGD 208
Query: 75 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
++ A ALF+ RD+ S+N++L+A +G A+ LF RM + +I +E+T+ +
Sbjct: 209 ISNAVALFEDMPERDVPSWNAILAA-CTQNGLFLEAVSLFRRMIN-EPSIRPNEVTVVCV 266
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSK--FALSSLIDMYSKCGSFREAYNVFSGCDGV 192
L+ A+ + K +H++ + DLS F +SL+D+Y KCG+ EA +VF
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYR--RDLSSDVFVSNSLVDLYGKCGNLEEASSVF------ 318
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
+ SK ++ A WN++I + +G E A+ +F E
Sbjct: 319 -KMASKKSLTA--------------------------WNSMINCFALHGRSEEAIAVFEE 351
Query: 253 MIE---KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYC 308
M++ I+ + T +L+ACT + G+ L+ G + G ++D
Sbjct: 352 MMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLG 411
Query: 309 KCGNMRYAESVYAGIGIKS 327
+ G A V + + +K+
Sbjct: 412 RAGRFDEALEVMSTMKMKA 430
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
+ F N+++ Y K NL +A ++F AS + L ++NSM++ +A G A+ +F M
Sbjct: 294 DVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFA-LHGRSEEAIAVFEEM 352
Query: 118 QSAR-DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS-------L 169
+ I D IT +LN +V G+ M ++F + L
Sbjct: 353 MKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMT------NRFGIEPRIEHYGCL 406
Query: 170 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMA 214
ID+ + G F EA V S D +++ AC G +D+A
Sbjct: 407 IDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLA 451
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 232/430 (53%), Gaps = 41/430 (9%)
Query: 214 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI-EKGIEYNQHTLASVLSAC 272
+L+VFW P + + SWN +I + ++G+ +++ LF+ M E + + TL +L AC
Sbjct: 86 SLSVFWHMP-YRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRAC 144
Query: 273 TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATS 332
+ + K G +H L LK S+ FVSS +V Y
Sbjct: 145 SASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV------------------------ 180
Query: 333 SLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKL--FREFRTTEA 390
G + A++LFD + R+ V++TA+ GYV QQ EA+ L FRE +
Sbjct: 181 -------DMGKLLHARKLFDDMPVRDSVLYTAMFGGYV--QQGEAMLGLAMFREMGYS-G 230
Query: 391 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 450
D++++V++L AC L GK H + +R + L +A+ DMY KC + YA
Sbjct: 231 FALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAH 290
Query: 451 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 510
F V S RDVI ++ +I GY G + +LF EMLK ++P+A+TF+ +LSAC H
Sbjct: 291 TVF--VNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH 348
Query: 511 RGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWG 570
GLVE +F M+E YN++PE+ HYA + D R LE+A +F+ +P++ D + G
Sbjct: 349 GGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMG 407
Query: 571 AFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKE 630
A L+ CK+ N + ++ EL++++ S YV LA +Y+A G+++E +R+ M+ K+
Sbjct: 408 AVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQ 467
Query: 631 ATKLPGCSWI 640
+K+PGCS I
Sbjct: 468 ISKVPGCSSI 477
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 67/258 (25%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
HV +K G +SS+F + L+ +Y G L A KLFD MP R++ + A+ Y++
Sbjct: 157 HVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQ---- 212
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
Q A+ A R++ Y+G +D + + ++L
Sbjct: 213 -QGEAMLGLAMFREM--------GYSG---------------------FALDSVVMVSLL 242
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+L + +GK +H + ++ + L +++ DMY KC A+ VF
Sbjct: 243 MACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFV-------- 294
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
N D +SW++LI GY +G + + LF EM++
Sbjct: 295 -------------------------NMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLK 329
Query: 256 KGIEYNQHTLASVLSACT 273
+GIE N T VLSAC
Sbjct: 330 EGIEPNAVTFLGVLSACA 347
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 181/660 (27%), Positives = 299/660 (45%), Gaps = 100/660 (15%)
Query: 39 SIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLS 98
S+HGL+ ++ P + N+II Y K + A +F+ RD++S N++L+
Sbjct: 310 SLHGLVIKS----GYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILN 365
Query: 99 AYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTA 158
+A A+G A + +MQS D I D T+ ++ ++ L G+ +H Y V+
Sbjct: 366 GFA-ANGMFEEAFGILNQMQSV-DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRME 423
Query: 159 NDLSKF-ALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALN- 216
++S+IDMY KCG +A +F DLVS N+M++A ++G A N
Sbjct: 424 MQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHR-DLVSWNSMISAFSQNGFTHKAKNL 482
Query: 217 -------------------------------VFWKN---------------------PEF 224
+F K+ E
Sbjct: 483 FKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSET 542
Query: 225 NDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKC 283
D SWN++I+G +G+ +L F M +G I ++ TL +SA L + G+C
Sbjct: 543 RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRC 602
Query: 284 VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 343
H L +K+ + + + ++ Y +C ++
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIE----------------------------- 633
Query: 344 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 403
A ++F +S+ N W + S +++ VF+LFR + L P+ + V +L
Sbjct: 634 --SAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK----LEPNEITFVGLLS 687
Query: 404 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 463
A + S G Q H +++R + +++ALVDMYS CG + K F+ +
Sbjct: 688 ASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFR--NSGVNSI 745
Query: 464 ILYNVMIAGYAHHGFENKAIQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELGEKFFM 522
+N +I+ + HG KA++LF+E+ S ++P+ +F++LLSAC H G ++ G ++
Sbjct: 746 SAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYK 805
Query: 523 SMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNT 582
M+E + V P H +VDM GR +L +A EF+ I A +WGA L+AC + +T
Sbjct: 806 QMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDT 865
Query: 583 TLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYV 642
L K+ E L ++E DN S Y+ LAN Y G W E R+RK + KLPG S I V
Sbjct: 866 KLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 200/451 (44%), Gaps = 78/451 (17%)
Query: 65 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 124
++ Y + L + LFD +D++ +NSM++A +G A+ LF M +
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITAL-NQNGRYIAAVGLFIEMIHKGNEF 186
Query: 125 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 184
+ L S L C +H ++T ++L+++Y+K + A
Sbjct: 187 DSTTLLLAASALSSLHLSRKC--SMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAEC 244
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 244
VF+ + E D VSWNT++ + NG+
Sbjct: 245 VFT---------------------------------HMEHRDIVSWNTIMTKCLANGHPR 271
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 304
++L F M G E + T + V+SAC+ ++ L LG+ +H LV+K+
Sbjct: 272 KSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSG------------ 319
Query: 305 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 364
Y+ + +G +S+I+ YS G+ A+ +F+ L R+ + A
Sbjct: 320 ----------YSPEAHVSVG-------NSIISMYSKCGDTEAAETVFEELVCRDVISSNA 362
Query: 365 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 424
+ +G+ + E F + + ++ + + PD +V++ C + G+ H Y +R
Sbjct: 363 ILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRM 422
Query: 425 KLNMDE-KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 483
++ ++ ++++DMY KCG AE F+ T + RD++ +N MI+ ++ +GF +KA
Sbjct: 423 EMQSRALEVINSVIDMYGKCGLTTQAELLFK--TTTHRDLVSWNSMISAFSQNGFTHKAK 480
Query: 484 QLFQEML------KISLKPDAITFVALLSAC 508
LF+E++ K SL T +A+L++C
Sbjct: 481 NLFKEVVSEYSCSKFSLS----TVLAILTSC 507
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 140/681 (20%), Positives = 261/681 (38%), Gaps = 126/681 (18%)
Query: 1 MKSLIVRDALVVYRD-HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNA 59
++S ++R R H A+K GL + T ++L+ Y G L + LFD++ ++
Sbjct: 94 LRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDV 153
Query: 60 FSWNAIIMAYIKAHNLTQARALFDSASHR------------------------------- 88
WN++I A + A LF H+
Sbjct: 154 IVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCL 213
Query: 89 --------DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAK 140
D N++++ YA + + A +F M+ RD + + I + N +
Sbjct: 214 AIETGLVGDSSLCNALMNLYAKGENLSS-AECVFTHMEH-RDIVSWNTIMTKCLANGHPR 271
Query: 141 LRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFRE--------AYNVFSGCDGV 192
+ Q M + + S +I S C S E + SG
Sbjct: 272 KSL-----QYFKSMTGSGQEADTVTFSCVI---SACSSIEELTLGESLHGLVIKSGYSPE 323
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
+ N++++ + G + A VF + D +S N ++ G+ NG E A + +
Sbjct: 324 AHVSVGNSIISMYSKCGDTEAAETVF-EELVCRDVISSNAILNGFAANGMFEEAFGILNQ 382
Query: 253 M--IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF-VSSGIVDFYCK 309
M ++K I+ + T+ S+ S C L + G+ VH ++ + S V + ++D Y K
Sbjct: 383 MQSVDK-IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 310 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF------------------ 351
CG AE ++ + + +S+I+ +S G KAK LF
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVL 501
Query: 352 -----------------------------------DSLSE-RNYVVWTALCSGYVKSQQC 375
+++SE R+ W ++ SG S
Sbjct: 502 AILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHH 561
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
+ F+ + D + ++ + A + G+ H +++ +D +L +
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621
Query: 436 LVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
L+ MY +C +I A K F L+ SD ++ +N +I+ + + + QLF+ + L+
Sbjct: 622 LITMYGRCKDIESAVKVFGLI--SDPNLCSWNCVISALSQNKAGREVFQLFR---NLKLE 676
Query: 496 PDAITFVALLSACRHRGLVELGEKFFMSM-KEDYNVLPEIYHYACMVDMYGRGNQLEKAV 554
P+ ITFV LLSA G G + + + + P + A +VDMY LE +
Sbjct: 677 PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANP--FVSAALVDMYSSCGMLETGM 734
Query: 555 EFMRKIPIQIDATIWGAFLNA 575
+ R + + W + ++A
Sbjct: 735 KVFRNSGVN-SISAWNSVISA 754
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/427 (31%), Positives = 224/427 (52%), Gaps = 38/427 (8%)
Query: 250 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 309
+ M+ + + +T SV+ +C L L++GK VH + + + +V + +V FY K
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 310 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 369
C G+M A+++FD + E++ V W +L SG+
Sbjct: 155 C-------------------------------GDMEGARQVFDRMPEKSIVAWNSLVSGF 183
Query: 370 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 429
++ + ++F + R + PD+ V++L ACA +SLG H YI+ L+++
Sbjct: 184 EQNGLADEAIQVFYQMRES-GFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN 242
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 489
KL +AL+++YS+CG++ A + F + +++ V + MI+ Y HG+ +A++LF +M
Sbjct: 243 VKLGTALINLYSRCGDVGKAREVFDKMKETN--VAAWTAMISAYGTHGYGQQAVELFNKM 300
Query: 490 LK-ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGN 548
P+ +TFVA+LSAC H GLVE G + M + Y ++P + H+ CMVDM GR
Sbjct: 301 EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAG 360
Query: 549 QLEKAVEFMRKIPIQIDAT---IWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 605
L++A +F+ ++ AT +W A L ACK++ N L + + L+ +E DN +V
Sbjct: 361 FLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVM 420
Query: 606 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYST 665
L+N+YA GK +E+ IR M K G S I VEN ++F+ GD SH + IY
Sbjct: 421 LSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRY 480
Query: 666 LVCLYGK 672
L L +
Sbjct: 481 LETLISR 487
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 165/396 (41%), Gaps = 71/396 (17%)
Query: 114 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 173
+ RM S+ + T T+++ A L + GK +H + V + L + ++L+ Y
Sbjct: 95 YRRMLSS--NVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFY 152
Query: 174 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 233
SKCG M+ A VF + PE V+WN+L
Sbjct: 153 SKCGD--------------------------------MEGARQVFDRMPE-KSIVAWNSL 179
Query: 234 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 293
++G+ QNG + A+ +F +M E G E + T S+LSAC + LG VH
Sbjct: 180 VSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVH-------- 231
Query: 294 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 353
Q++ S +D K G ++LI YS G++ KA+ +FD
Sbjct: 232 ---QYIISEGLDLNVKLG--------------------TALINLYSRCGDVGKAREVFDK 268
Query: 354 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 413
+ E N WTA+ S Y + +LF + IP+ + V VL ACA +
Sbjct: 269 MKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEE 328
Query: 414 GKQTHAYILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV--ILYNVMI 470
G+ + + ++ +L + +VDM + G + A K + + + L+ M+
Sbjct: 329 GRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
Query: 471 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLS 506
H + +++ + + I+L+PD +LS
Sbjct: 389 GACKMHRNYDLGVEIAKRL--IALEPDNPGHHVMLS 422
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 113/277 (40%), Gaps = 68/277 (24%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H A+ SG + L+ YS G ++ A ++FD+MP ++ +WN+++ + +
Sbjct: 130 HCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ---- 185
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+G A+ +F +M+ + D T ++L
Sbjct: 186 ----------------------------NGLADEAIQVFYQMRES--GFEPDSATFVSLL 215
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ A+ V G +H Y++ DL+ ++LI++YS+CG +A VF
Sbjct: 216 SACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD-------- 267
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
K E N +W +I+ Y +GY ++A+ LF +M +
Sbjct: 268 ------------------------KMKETN-VAAWTAMISAYGTHGYGQQAVELFNKMED 302
Query: 256 K-GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 291
G N T +VLSAC ++ G+ V+ + K+
Sbjct: 303 DCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 183/644 (28%), Positives = 307/644 (47%), Gaps = 79/644 (12%)
Query: 33 QLIHLYSIHGLLQ-EAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLV 91
Q I SI G+ +AH L P S + ++ A +K ++ AR +FD S R +V
Sbjct: 74 QCIDERSISGIKTIQAHMLKSGFPAE--ISGSKLVDASLKCGDIDYARQVFDGMSERHIV 131
Query: 92 SYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMH 151
++NS++ AY A++++ M + + + DE TL+++ + L + ++ H
Sbjct: 132 TWNSLI-AYLIKHRRSKEAVEMYRLMIT--NNVLPDEYTLSSVFKAFSDLSLEKEAQRSH 188
Query: 152 SYMVKTANDLSK-FALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGK 210
V ++S F S+L+DMY K G REA V+D V
Sbjct: 189 GLAVILGLEVSNVFVGSALVDMYVKFGKTREA-------KLVLDRV-------------- 227
Query: 211 MDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLS 270
E D V LI GY Q G A+ F M+ + ++ N++T ASVL
Sbjct: 228 ------------EEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLI 275
Query: 271 ACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFA 330
+C LK + GK +H L++K+ G +S A
Sbjct: 276 SCGNLKDIGNGKLIHGLMVKS--------------------------------GFESALA 303
Query: 331 T-SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTE 389
+ +SL+ Y + + R+F + N V WT+L SG V++ + E FR+ +
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM-MRD 362
Query: 390 ALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYA 449
++ P++ + + L C+ A G+Q H + + + D+ S L+D+Y KCG A
Sbjct: 363 SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
Query: 450 EKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACR 509
F T S+ DVI N MI YA +GF +A+ LF+ M+ + L+P+ +T +++L AC
Sbjct: 423 RLVFD--TLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480
Query: 510 HRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIW 569
+ LVE G + F S ++D +L HYACMVD+ GR +LE+A E + I D +W
Sbjct: 481 NSRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLW 538
Query: 570 GAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGK 629
L+ACK++ + ++ ++L++E + + ++N+YA+ GKWN + ++ +M+
Sbjct: 539 RTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDM 598
Query: 630 EATKLPGCSWIYVENGIHVFTSGDT-SHSKADAIYSTLVCLYGK 672
+ K P SW+ + H F +GD SH ++ I L L K
Sbjct: 599 KLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKK 642
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 122/271 (45%), Gaps = 47/271 (17%)
Query: 15 DHVQAIKSGLASSIFTCNQLIHLYS---IHGLLQEAHKLFDKMPHRNAF-SWNAIIMAYI 70
+ VQ + AS + +C L + + IHGL+ K +A S +++ Y+
Sbjct: 261 EKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMV-------KSGFESALASQTSLLTMYL 313
Query: 71 KAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEIT 130
+ + + +F + + VS+ S++S +G + +AL F +M RD+I + T
Sbjct: 314 RCSLVDDSLRVFKCIEYPNQVSWTSLISGLV-QNGREEMALIEFRKMM--RDSIKPNSFT 370
Query: 131 LTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCD 190
L++ L + L + G+Q+H + K D K+A S LID+Y KC GC
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKC-----------GCS 419
Query: 191 GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 250
DMA VF E + +S NT+I Y QNG+ AL LF
Sbjct: 420 ---------------------DMARLVFDTLSEVD-VISLNTMIYSYAQNGFGREALDLF 457
Query: 251 IEMIEKGIEYNQHTLASVLSACTGLKCLKLG 281
MI G++ N T+ SVL AC + ++ G
Sbjct: 458 ERMINLGLQPNDVTVLSVLLACNNSRLVEEG 488
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 244/480 (50%), Gaps = 39/480 (8%)
Query: 212 DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 271
D +L++F +N E + N LI G +N E ++ FI M+ G++ ++ T VL +
Sbjct: 77 DYSLSIF-RNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKS 135
Query: 272 CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA--------------- 316
+ L LG+ +HA LKN + FV +VD Y K G +++A
Sbjct: 136 NSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKES 195
Query: 317 --------------------ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 356
+++ + ++ + S+LI GY G + +AK+LF+ + E
Sbjct: 196 ILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE 255
Query: 357 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 416
+N V WT L +G+ ++ E + E + L P+ I VL AC+ L G +
Sbjct: 256 KNVVSWTTLINGFSQTGDYETAISTYFEM-LEKGLKPNEYTIAAVLSACSKSGALGSGIR 314
Query: 417 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 476
H YIL + +D + +ALVDMY+KCG + A F + + +D++ + MI G+A H
Sbjct: 315 IHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNM--NHKDILSWTAMIQGWAVH 372
Query: 477 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 536
G ++AIQ F++M+ KPD + F+A+L+AC + V+LG FF SM+ DY + P + H
Sbjct: 373 GRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKH 432
Query: 537 YACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVE 596
Y +VD+ GR +L +A E + +PI D T W A ACK + + + LL+++
Sbjct: 433 YVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELD 492
Query: 597 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSH 656
+ Y+ L +A++G ++ + R ++ + + G S+I ++ ++ F++GD SH
Sbjct: 493 PELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSH 552
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 40/323 (12%)
Query: 121 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 180
R + D +T +L ++KL G+ +H+ +K D F SL+DMY+K G +
Sbjct: 119 RLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLK 178
Query: 181 EAYNVFSGCDGVV---DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN------------ 225
A+ VF + ++ N ++ CR M MA +F PE N
Sbjct: 179 HAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYV 238
Query: 226 ------------------DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 267
+ VSW TLI G+ Q G E A++ + EM+EKG++ N++T+A+
Sbjct: 239 DSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAA 298
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
VLSAC+ L G +H +L N ++ + + +VD Y KCG + A +V++ + K
Sbjct: 299 VLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKD 358
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSL----SERNYVVWTALCSGYVKSQQCEAVFKLFR 383
+ +++I G++ G +A + F + + + VV+ A+ + + S + + F
Sbjct: 359 ILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFD 418
Query: 384 EFRTTEALIPDT---MIIVNVLG 403
R A+ P +++V++LG
Sbjct: 419 SMRLDYAIEPTLKHYVLVVDLLG 441
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 39/276 (14%)
Query: 6 VRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAI 65
++ A V+ + IK SI N LI+ Y + A LF MP RN+ SW+ +
Sbjct: 177 LKHAFQVFEESPDRIKK---ESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTL 233
Query: 66 IMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIG 125
I Y+ + L +A+ LF+ +++VS+ ++++ ++ +T F ++ +
Sbjct: 234 IKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKG---LK 290
Query: 126 MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNV 185
+E T+ +L+ +K + G ++H Y++ L + ++L+DMY+KCG A V
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350
Query: 186 FSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMER 245
FS N D +SW +I G+ +G +
Sbjct: 351 FS---------------------------------NMNHKDILSWTAMIQGWAVHGRFHQ 377
Query: 246 ALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG 281
A+ F +M+ G + ++ +VL+AC + LG
Sbjct: 378 AIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG 413
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 112/260 (43%), Gaps = 26/260 (10%)
Query: 393 PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKS 452
PD ++++ AC A+L + HA ILR + + ++A+ LV S + Y+
Sbjct: 27 PDESHFISLIHACKDTASL---RHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSI 82
Query: 453 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 512
F+ +R+ + N +I G + +++ F ML++ +KPD +TF +L + G
Sbjct: 83 FR--NSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG 140
Query: 513 LVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDAT---IW 569
LG + +++ V + + +VDMY + QL+ A + + P +I IW
Sbjct: 141 FRWLGRALHAATLKNF-VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIW 199
Query: 570 GAFLNA-CKINN---NTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKE 625
+N C+ + TTL + E N + L Y G+ N ++ +
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSMPER-------NSGSWSTLIKGYVDSGELNRAKQLFEL 252
Query: 626 MRGKEATKLPGCSWIYVENG 645
M K SW + NG
Sbjct: 253 MPEKNVV-----SWTTLING 267
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 240/459 (52%), Gaps = 9/459 (1%)
Query: 214 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 273
A VF + PE D +S +I +V+ A F ++ GI N+ T +V+ + T
Sbjct: 46 AHKVFDEIPEL-DVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 274 GLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSS 333
+ +KLGK +H LK SN FV S +++ Y K + A + + + ++
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 334 LIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 393
LI+GY K +A LF ++ ER+ V W A+ G+ ++ + E F + +IP
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 394 DTMIIVNVLGACAIQATLSLGKQTHA---YILRTKLNMDEKLASALVDMYSKCGNIAYAE 450
+ + A + A+ GK HA L + N+ + ++L+ YSKCGN+ +
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNV--FVWNSLISFYSKCGNMEDSL 282
Query: 451 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK-ISLKPDAITFVALLSACR 509
+F + + R+++ +N MI GYAH+G +A+ +F++M+K +L+P+ +T + +L AC
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 510 HRGLVELGEKFFMSMKEDYN--VLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDAT 567
H GL++ G +F DY+ L E+ HYACMVDM R + ++A E ++ +P+
Sbjct: 343 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 568 IWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMR 627
W A L C+I++N L K A ++L+++ + S YV L+N Y+A W + IR++M+
Sbjct: 403 FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMK 462
Query: 628 GKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
+ GCSWI V + I VF + D ++ D +Y L
Sbjct: 463 ETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/519 (23%), Positives = 218/519 (42%), Gaps = 90/519 (17%)
Query: 1 MKSLIVRDALVVYRDHVQAIKSGLASSIFTCNQLI-HLYSIHGLLQEAHKLFDKMPHRNA 59
M +I+ +++ R + + + + S + +L+ H+ S L++ AHK+FD++P +
Sbjct: 1 MLHMILSQRVILLRKYHSSANALVTKSPNSIPELVKHIDS--DLIRNAHKVFDEIPELDV 58
Query: 60 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 119
S A+I ++K ++R + S + + L+
Sbjct: 59 ISATAVIGRFVK-----ESRHVEASQAFKRLLCLG------------------------- 88
Query: 120 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 179
I +E T T++ S R V GKQ+H Y +K + F S++++ Y K +
Sbjct: 89 ----IRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTL 144
Query: 180 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 239
+A F ++VS +++ + + + AL++F PE V+WN +I G+ Q
Sbjct: 145 TDARRCFDDTRD-PNVVSITNLISGYLKKHEFEEALSLFRAMPE-RSVVTWNAVIGGFSQ 202
Query: 240 NGYMERALTLFIEMIEKGIEY-NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-NQ 297
G E A+ F++M+ +G+ N+ T ++A + + GK +HA +K G N
Sbjct: 203 TGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNV 262
Query: 298 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE- 356
FV + ++ FY KCGNM SL+A F+ L E
Sbjct: 263 FVWNSLISFYSKCGNME-----------------DSLLA--------------FNKLEEE 291
Query: 357 -RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG- 414
RN V W ++ GY + + E +F + L P+ + I+ VL AC + G
Sbjct: 292 QRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGY 351
Query: 415 ----KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE---KSFQLVTDSDRDVILYN 467
K + Y L ++ + +VDM S+ G AE KS L D + +
Sbjct: 352 MYFNKAVNDYDDPNLLELEH--YACMVDMLSRSGRFKEAEELIKSMPL----DPGIGFWK 405
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLS 506
++ G H NK + + L P ++ +LS
Sbjct: 406 ALLGGCQIHS--NKRLAKLAASKILELDPRDVSSYVMLS 442
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/470 (31%), Positives = 242/470 (51%), Gaps = 44/470 (9%)
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
D + N +V + + +++ A +F + E N VSW ++I+GY G + AL++F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPN-VVSWTSVISGYNDMGKPQNALSMFQKM 121
Query: 254 IE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
E + + N++T ASV AC+ L ++GK +HA + + N VSS +VD Y KC +
Sbjct: 122 HEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCND 181
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL--SERNYVVWTALCSGYV 370
+ A+R+FDS+ RN V WT++ + Y
Sbjct: 182 VE-------------------------------TARRVFDSMIGYGRNVVSWTSMITAYA 210
Query: 371 KSQQCEAVFKLFREFRTTEALIPD---TMIIVNVLGACAIQATLSLGKQTHAYILRTKLN 427
++ + +LFR F AL D ++ +V+ AC+ L GK H + R
Sbjct: 211 QNARGHEAIELFRSFNA--ALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYE 268
Query: 428 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
+ +A++L+DMY+KCG+++ AEK F + VI Y MI A HG A++LF
Sbjct: 269 SNTVVATSLLDMYAKCGSLSCAEKIFLRI--RCHSVISYTSMIMAKAKHGLGEAAVKLFD 326
Query: 488 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRG 547
EM+ + P+ +T + +L AC H GLV G ++ M E Y V+P+ HY C+VDM GR
Sbjct: 327 EMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRF 386
Query: 548 NQLEKAVEFMRKIPIQID--ATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 605
++++A E + I + + A +WGA L+A +++ +V +A + L++ S Y+
Sbjct: 387 GRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIA 446
Query: 606 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTS 655
L+N YA G W + +R EM+ K CSWI ++ ++VF +GD S
Sbjct: 447 LSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLS 496
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 130/538 (24%), Positives = 222/538 (41%), Gaps = 94/538 (17%)
Query: 17 VQAIKSGLASSIFTC---NQLIHL----YSIHGLLQEAHKLFDKMPH---------RNAF 60
+Q + A+S+F N HL + +H L + + F + H + F
Sbjct: 6 IQNVHLAPATSLFVPQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTF 65
Query: 61 SWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSA 120
+ N ++++Y+K + AR LFD ++VS+ S++S Y G AL +F +M
Sbjct: 66 TVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDM-GKPQNALSMFQKMHED 124
Query: 121 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 180
R + +E T ++ + L GK +H+ + + + SSL+DMY KC
Sbjct: 125 R-PVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVE 183
Query: 181 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 240
A VF D + NV VSW ++I Y QN
Sbjct: 184 TARRVF---------------------DSMIGYGRNV----------VSWTSMITAYAQN 212
Query: 241 GYMERALTLF--IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 298
A+ LF NQ LASV+SAC+ L L+ GK H LV + SN
Sbjct: 213 ARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTV 272
Query: 299 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 358
V++ ++D Y KCG++ AE ++ I S + +S+I M KAK
Sbjct: 273 VATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI--------MAKAKHGLG------ 318
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
EA KLF E + P+ + ++ VL AC+ ++ G + +
Sbjct: 319 -----------------EAAVKLFDEM-VAGRINPNYVTLLGVLHACSHSGLVNEGLE-Y 359
Query: 419 AYILRTKLNM--DEKLASALVDMYSKCGNIAYA-EKSFQLVTDSDRDVILYNVMIAGYAH 475
++ K + D + + +VDM + G + A E + + +++ +L+ +++
Sbjct: 360 LSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRL 419
Query: 476 HGFENKAIQLFQEMLKISLKPD---AITFVALLSACRHRGLVELGEKFFMSMKEDYNV 530
HG +++ E K ++ + ++AL +A G E E + MK NV
Sbjct: 420 HG----RVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNV 473
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/547 (29%), Positives = 263/547 (48%), Gaps = 77/547 (14%)
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTA-NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
++ + + R+ C G+ +H+++V + L++ A + L+ Y +CG +A VF
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVTSGIARLTRIA-AKLVTFYVECGKVLDARKVFDEMPKR 80
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
D+ M+ AC R NGY + +L F E
Sbjct: 81 -DISGCVVMIGACAR--------------------------------NGYYQESLDFFRE 107
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
M + G++ + + S+L A L + GK +H LVLK S+ F+ S ++D Y K G
Sbjct: 108 MYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGE 167
Query: 313 MRYAESVYAGIG----------------------------------IKSPFAT-SSLIAG 337
+ A V++ +G IK T ++LI+G
Sbjct: 168 VGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISG 227
Query: 338 YSSKGNMTKAKRLFDSLSERNY----VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 393
+S N K + + + Y V WT++ SG V + Q E F F++ T L P
Sbjct: 228 FSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQM-LTHGLYP 286
Query: 394 DTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF 453
++ I+ +L AC A + GK+ H Y + T L + SAL+DMY KCG I+ A F
Sbjct: 287 NSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF 346
Query: 454 QLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGL 513
+ + + +N MI YA+HG +KA++LF +M K D +TF A+L+AC H GL
Sbjct: 347 R--KTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGL 404
Query: 514 VELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFL 573
+LG+ F+ M+ Y ++P + HYACMVD+ GR +L +A E ++ + ++ D +WGA L
Sbjct: 405 TDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALL 464
Query: 574 NACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATK 633
AC+ + N L + A + L ++E +N + L ++YA G W + R++K ++ K +
Sbjct: 465 AACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRR 524
Query: 634 LPGCSWI 640
G SW+
Sbjct: 525 FLGSSWV 531
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 203/492 (41%), Gaps = 113/492 (22%)
Query: 65 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 124
++ Y++ + AR +FD RD+ M+ A A +G +LD F M +D +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA-RNGYYQESLDFFREMY--KDGL 113
Query: 125 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 184
+D + ++L S L +GK +H ++K + + F +SSLIDMYSK G A
Sbjct: 114 KLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARK 173
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALN--------------VFW----------K 220
VFS G DLV NAM++ + + D ALN + W +
Sbjct: 174 VFSDL-GEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMR 232
Query: 221 NPEF--------------NDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLA 266
N E D VSW ++I+G V N E+A F +M+ G+ N T+
Sbjct: 233 NEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATII 292
Query: 267 SVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 326
++L ACT L +K GK +H + + FV S ++D Y KCG + A ++ K
Sbjct: 293 TLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK 352
Query: 327 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 386
+ +S+I Y++ G KA LFD Q EA
Sbjct: 353 TTVTFNSMIFCYANHGLADKAVELFD---------------------QMEA--------- 382
Query: 387 TTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA--SALVDMYSKCG 444
T E L D + +L AC+ LG Q +++ K + +L + +VD+ + G
Sbjct: 383 TGEKL--DHLTFTAILTACSHAGLTDLG-QNLFLLMQNKYRIVPRLEHYACMVDLLGRAG 439
Query: 445 NIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVAL 504
K ++ ++ + + ++PD + AL
Sbjct: 440 ------------------------------------KLVEAYEMIKAMRMEPDLFVWGAL 463
Query: 505 LSACRHRGLVEL 516
L+ACR+ G +EL
Sbjct: 464 LAACRNHGNMEL 475
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 157/391 (40%), Gaps = 95/391 (24%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYI----- 70
H +K S F + LI +YS G + A K+F + ++ +NA+I Y
Sbjct: 140 HCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQA 199
Query: 71 -KAHNLTQARALFDSASHRDLVSYNSMLSAYAGA---------------DG--CDTV--- 109
+A NL + L D++++N+++S ++ DG D V
Sbjct: 200 DEALNLVKDMKLL--GIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWT 257
Query: 110 --------------ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMV 155
A D F +M + + + T+ T+L L + +GK++H Y V
Sbjct: 258 SIISGLVHNFQNEKAFDAFKQMLT--HGLYPNSATIITLLPACTTLAYMKHGKEIHGYSV 315
Query: 156 KTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMAL 215
T + F S+L+DMY KCG E A+
Sbjct: 316 VTGLEDHGFVRSALLDMYGKCGFISE--------------------------------AM 343
Query: 216 NVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL 275
+F K P+ TV++N++I Y +G ++A+ LF +M G + + T ++L+AC+
Sbjct: 344 ILFRKTPK-KTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHA 402
Query: 276 KCLKLGKCVHALV---------LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 326
LG+ + L+ L++ C +VD + G + A + + ++
Sbjct: 403 GLTDLGQNLFLLMQNKYRIVPRLEHYAC--------MVDLLGRAGKLVEAYEMIKAMRME 454
Query: 327 SP-FATSSLIAGYSSKGNMTKAKRLFDSLSE 356
F +L+A + GNM A+ L+E
Sbjct: 455 PDLFVWGALLAACRNHGNMELARIAAKHLAE 485
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/588 (26%), Positives = 284/588 (48%), Gaps = 49/588 (8%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
+ F+ A++ Y+K +T A + D R + S N+ +S C D F
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCR----DAFRMF 120
Query: 118 QSAR-DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 176
AR GM+ +T+ ++L + G Q+H +K+ ++ + +SL+ MYS+C
Sbjct: 121 GDARVSGSGMNSVTVASVLGGCGDIE---GGMQLHCLAMKSGFEMEVYVGTSLVSMYSRC 177
Query: 177 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 236
G + +A +F K P V++N I+G
Sbjct: 178 GEWV--------------------------------LAARMFEKVPH-KSVVTYNAFISG 204
Query: 237 YVQNGYMERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 295
++NG M ++F M + E N T + ++AC L L+ G+ +H LV+K +
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 296 NQFVSSGIVDFYCKCGNMRYAESVYAGI-GIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 354
V + ++D Y KC + A V+ + ++ + +S+I+G G A LF+ L
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Query: 355 S----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT 410
+ + W +L SG+ + + FK F + ++P + ++L AC+ T
Sbjct: 325 DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV-VMVPSLKCLTSLLSACSDIWT 383
Query: 411 LSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMI 470
L GK+ H ++++ D + ++L+DMY KCG ++A + F +D + +NVMI
Sbjct: 384 LKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMI 443
Query: 471 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNV 530
+GY HG AI++F+ + + ++P TF A+LSAC H G VE G + F M+E+Y
Sbjct: 444 SGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGY 503
Query: 531 LPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEE 590
P H CM+D+ GR +L +A E + ++ + + L +C+ + + L ++A
Sbjct: 504 KPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAM 562
Query: 591 ELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCS 638
+L ++E +N + +V L+++YAA +W ++ IR+ + K+ KLPG S
Sbjct: 563 KLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 176/401 (43%), Gaps = 74/401 (18%)
Query: 127 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 186
++ T +L AKL V G+ +H+ +VKT + F ++L+ MY K
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQ-------- 81
Query: 187 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 246
V D AL V + PE S N ++G ++NG+ A
Sbjct: 82 -----VTD-------------------ALKVLDEMPE-RGIASVNAAVSGLLENGFCRDA 116
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 306
+F + G N T+ASVL C ++ G +H L +K+
Sbjct: 117 FRMFGDARVSGSGMNSVTVASVLGGCGDIEG---GMQLHCLAMKSG-------------- 159
Query: 307 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 366
+ VY G +SL++ YS G A R+F+ + ++ V + A
Sbjct: 160 --------FEMEVYVG---------TSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202
Query: 367 SGYVKS---QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 423
SG +++ +VF L R+F + E P+ + VN + ACA L G+Q H +++
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEE---PNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 424 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 483
+ + + +AL+DMYSKC A F + D+ R++I +N +I+G +G A+
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDT-RNLISWNSVISGMMINGQHETAV 318
Query: 484 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 524
+LF+++ LKPD+ T+ +L+S G V KFF M
Sbjct: 319 ELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Query: 393 PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKS 452
P+ +L +CA + G+ HA +++T +D A+ALV MY K + A K
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 453 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 512
+ +R + N ++G +GF A ++F + +++T ++L C G
Sbjct: 89 LDEM--PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---G 143
Query: 513 LVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGA 571
+E G + ++MK + + E+Y +V MY R + A K+P + T + A
Sbjct: 144 DIEGGMQLHCLAMKSGFEM--EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVT-YNA 200
Query: 572 FLNACKINNNTTLVK 586
F++ N LV
Sbjct: 201 FISGLMENGVMNLVP 215
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 283/584 (48%), Gaps = 75/584 (12%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
+ +I Y+K ++ AR LFD S RD+VS+ +M+S ++ G AL LF M R+
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRC-GYHPDALLLFKEMH--RE 107
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ ++ T ++L L + G Q+H + K
Sbjct: 108 DVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEK-------------------------- 141
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
C G +L+ ++A+++ R GKM+ A F E D VSWN +I GY N
Sbjct: 142 ----GNCAG--NLIVRSALLSLYARCGKMEEARLQFDSMKE-RDLVSWNAMIDGYTANAC 194
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
+ + +LF M+ +G + + T S+L A +KCL++ +H L +K
Sbjct: 195 ADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIK------------ 242
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
G G +S SL+ Y G++ A +L + +R+ +
Sbjct: 243 ------------------LGFG-RSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSC 283
Query: 363 TALCSGYVKSQQCEA-VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
TAL +G+ + C + F +F++ + + D +++ ++L C A++++G+Q H +
Sbjct: 284 TALITGFSQQNNCTSDAFDIFKDMIRMKTKM-DEVVVSSMLKICTTIASVTIGRQIHGFA 342
Query: 422 LRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 480
L++ ++ D L ++L+DMY+K G I A +F+ + ++DV + +IAGY HG
Sbjct: 343 LKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEM--KEKDVRSWTSLIAGYGRHGNFE 400
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 540
KAI L+ M +KP+ +TF++LLSAC H G ELG K + +M + + H +C+
Sbjct: 401 KAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCI 460
Query: 541 VDMYGRGNQLEKAVEFMRKIP--IQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEAD 598
+DM R LE+A +R + + ++ WGAFL+AC+ + N L K A +LL +E
Sbjct: 461 IDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPR 520
Query: 599 NGSRYVQLANVYAAEGKWNEMGRIRKEMR-GKEATKLPGCSWIY 641
Y+ LA+VYAA G W+ RK M+ K PG S +Y
Sbjct: 521 KPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLVY 564
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 163/374 (43%), Gaps = 48/374 (12%)
Query: 195 LVSKNAMVAACCRDGKM-DMALNVFWKNPEFN------------DTVSWNTLIAGYVQNG 241
L+ N++ C + ++ DM ++++ K + D VSW +I+ + + G
Sbjct: 33 LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 301
Y AL LF EM + ++ NQ T SVL +C L CLK G +H V K + N V S
Sbjct: 93 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 152
Query: 302 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 361
++ Y +CG M +A+ FDS+ ER+ V
Sbjct: 153 ALLSLYARCGKME-------------------------------EARLQFDSMKERDLVS 181
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
W A+ GY + + F LF + TE PD ++L A + L + + H
Sbjct: 182 WNAMIDGYTANACADTSFSLF-QLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLA 240
Query: 422 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA-HHGFEN 480
++ L +LV+ Y KCG++A A K + RD++ +I G++ + +
Sbjct: 241 IKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE--GTKKRDLLSCTALITGFSQQNNCTS 298
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 540
A +F++M+++ K D + ++L C V +G + + + ++ +
Sbjct: 299 DAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSL 358
Query: 541 VDMYGRGNQLEKAV 554
+DMY + ++E AV
Sbjct: 359 IDMYAKSGEIEDAV 372
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 193/485 (39%), Gaps = 95/485 (19%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H K A ++ + L+ LY+ G ++EA FD M R+ SWNA+I Y
Sbjct: 136 HGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYT----- 190
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A+ C + LF M + + D T ++L
Sbjct: 191 ---------------------------ANACADTSFSLFQLMLT--EGKKPDCFTFGSLL 221
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
S ++ + ++H +K S + SL++ Y KCGS A+ + G
Sbjct: 222 RASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEG------- 274
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV-QNGYMERALTLFIEMI 254
+ D +S LI G+ QN A +F +MI
Sbjct: 275 --------------------------TKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 308
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-NQFVSSGIVDFYCKCGNM 313
+ ++ ++S+L CT + + +G+ +H LK+ + + + ++D Y K G +
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEI 368
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS-ER---NYVVWTALCSGY 369
A + + K + +SLIAGY GN KA L++ + ER N V + +L S
Sbjct: 369 EDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSAC 428
Query: 370 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA------CAIQATLSLGKQTHAY-IL 422
+ Q E +K++ DTMI + + A C I G AY ++
Sbjct: 429 SHTGQTELGWKIY-----------DTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALI 477
Query: 423 RTK---LNMDEKLASALVDMYSKCGNIAYAE-KSFQLVTDSDRDVILYNVMIAGYAHHGF 478
R+K +++ A +D + GN+ ++ + QL++ R + Y + + YA +G
Sbjct: 478 RSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGA 537
Query: 479 ENKAI 483
+ A+
Sbjct: 538 WDNAL 542
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 161/612 (26%), Positives = 274/612 (44%), Gaps = 75/612 (12%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
+A+ N++I Y+K +AR LFD R++VS+ +M+ Y + G D L LF M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNS-GFDFEVLKLFKSM 126
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
+ ++ +E T + + + GKQ H +K +F ++L+ MYS C
Sbjct: 127 FFSGES-RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCS 185
Query: 178 SFREAYNVFSG---CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 234
EA V CD L+VF ++ +
Sbjct: 186 GNGEAIRVLDDLPYCD------------------------LSVF------------SSAL 209
Query: 235 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC 294
+GY++ G + L + + + +N T S L + L+ L L VH+ +++
Sbjct: 210 SGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFN 269
Query: 295 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 354
+ +++ Y KCG + YA+ R+FD
Sbjct: 270 AEVEACGALINMYGKCGKVLYAQ-------------------------------RVFDDT 298
Query: 355 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 414
+N + T + Y + + E LF + T E + P+ +L + A + L G
Sbjct: 299 HAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE-VPPNEYTFAILLNSIAELSLLKQG 357
Query: 415 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 474
H +L++ + +ALV+MY+K G+I A K+F +T RD++ +N MI+G +
Sbjct: 358 DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTF--RDIVTWNTMISGCS 415
Query: 475 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 534
HHG +A++ F M+ P+ ITF+ +L AC H G VE G +F + + ++V P+I
Sbjct: 416 HHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDI 475
Query: 535 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLK 594
HY C+V + + + A +FMR PI+ D W LNAC + N L K+ E ++
Sbjct: 476 QHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIE 535
Query: 595 VEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDT 654
++ YV L+N++A +W + ++R M + K PG SWI + N HVF + D
Sbjct: 536 KYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDN 595
Query: 655 SHSKADAIYSTL 666
H + IY+ +
Sbjct: 596 QHPEITLIYAKV 607
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 310 CGN---MRYAESVYAGIGI-------KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 359
C N +R ES++A + + + + +SLI Y +A++LFD + ERN
Sbjct: 41 CANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNV 100
Query: 360 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 419
V W A+ GY S V KLF+ + P+ + V +C+ + GKQ H
Sbjct: 101 VSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHG 160
Query: 420 YILRTKLNMDEKLASALVDMYSKC-GN 445
L+ L E + + LV MYS C GN
Sbjct: 161 CFLKYGLISHEFVRNTLVYMYSLCSGN 187
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 401 VLGACAIQATLSLGKQTHAYILRTKLNM---DEKLASALVDMYSKCGNIAYAEKSFQLVT 457
+L CA + L +G+ HA+++ T + D ++L+++Y KC A K F L+
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLM- 95
Query: 458 DSDRDVILYNVMIAGYAHHGFENKAIQLFQEM-LKISLKPDAITFVALLSACRHRGLVEL 516
+R+V+ + M+ GY + GF+ + ++LF+ M +P+ + +C + G +E
Sbjct: 96 -PERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 517 GEKF 520
G++F
Sbjct: 155 GKQF 158
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/585 (27%), Positives = 272/585 (46%), Gaps = 77/585 (13%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
A++ Y K L A +FD RD+V++N+M+S ++ C T + LF M+ D
Sbjct: 142 TALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS-LHCCLTDVIGLFLDMRRI-D 199
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKT--ANDLSKFALSSLIDMYSKCGSFR 180
+ + T+ M + + GK +H Y + +NDL + ++D+Y+K
Sbjct: 200 GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL--VVKTGILDVYAKSKCII 257
Query: 181 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 240
A VF +D F KN V+W+ +I GYV+N
Sbjct: 258 YARRVFD-----------------------LD-----FKKN-----EVTWSAMIGGYVEN 284
Query: 241 GYMERALTLFIEMI--EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 298
++ A +F +M+ + + +L C L G+CVH +K +
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLT 344
Query: 299 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 358
V + I+ FY K G++ A R F + ++
Sbjct: 345 VQNTIISFYAK-------------------------------YGSLCDAFRQFSEIGLKD 373
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
+ + +L +G V + + E F+LF E RT+ + PD ++ VL AC+ A L G H
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTS-GIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 419 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 478
Y + ++ + +AL+DMY+KCG + A++ F T RD++ +N M+ G+ HG
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFD--TMHKRDIVSWNTMLFGFGIHGL 490
Query: 479 ENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM-KEDYNVLPEIYHY 537
+A+ LF M + + PD +T +A+LSAC H GLV+ G++ F SM + D+NV+P I HY
Sbjct: 491 GKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHY 550
Query: 538 ACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEA 597
CM D+ R L++A +F+ K+P + D + G L+AC N L + +++ +
Sbjct: 551 NCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-G 609
Query: 598 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYV 642
+ V L+N Y+A +W + RIR + + K PG SW+ V
Sbjct: 610 ETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 37/297 (12%)
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFN-DTVSWNTLIAGYVQNGYMERALTLFIEM 253
LV+ + A+C ++++A +VF + P + ++W+ +I Y N + E+AL L+ +M
Sbjct: 38 LVNLTRLYASC---NEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKM 94
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
+ G+ ++T VL AC GL+ + GK +H+ V +D ++ +V + +VDFY KCG +
Sbjct: 95 LNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGEL 154
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
A V FD + +R+ V W A+ SG+
Sbjct: 155 EMAIKV-------------------------------FDEMPKRDMVAWNAMISGFSLHC 183
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
V LF + R + L P+ IV + A L GK H Y R + D +
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
+ ++D+Y+K I YA + F L D ++ + ++ MI GY + +A ++F +ML
Sbjct: 244 TGILDVYAKSKCIIYARRVFDL--DFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 125/558 (22%), Positives = 205/558 (36%), Gaps = 125/558 (22%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H S A+ ++ C L+ Y+ G L+ A K+FD+MP R+ +WNA+I + L
Sbjct: 126 HSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCL 185
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGM--------D 127
T LF D +S N LS G AL ++ + G D
Sbjct: 186 TDVIGLFLDMRRIDGLSPN--LSTIVGM----FPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 128 EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF- 186
+ T +L++ AK + + Y +++ K ++ S++I Y + +EA VF
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKK----NEVTWSAMIGGYVENEMIKEAGEVFF 295
Query: 187 --------------------SGC-------------------DGVVDLVSKNAMVAACCR 207
GC ++DL +N +++ +
Sbjct: 296 QMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAK 355
Query: 208 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 267
G + A F D +S+N+LI G V N E + LF EM GI + TL
Sbjct: 356 YGSLCDAFRQF-SEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLG 414
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
VL+AC+ L L G H + + N + + ++D Y KCG +
Sbjct: 415 VLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDV------------ 462
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 387
AKR+FD++ +R+ V W + G+ + LF +
Sbjct: 463 -------------------AKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQE 503
Query: 388 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 447
T + PD + ++ +L AC+ + GKQ + R N+ ++
Sbjct: 504 T-GVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDH------------- 549
Query: 448 YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 507
YN M A G+ ++A +M +PD LLSA
Sbjct: 550 ------------------YNCMTDLLARAGYLDEAYDFVNKM---PFEPDIRVLGTLLSA 588
Query: 508 CRHRGLVELGEKFFMSMK 525
C ELG + M+
Sbjct: 589 CWTYKNAELGNEVSKKMQ 606
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 6/184 (3%)
Query: 338 YSSKGNMTKAKRLFDSLSER--NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 395
Y+S + A+ +FD + N + W + Y + E L+ + + + P
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNS-GVRPTK 103
Query: 396 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 455
VL ACA + GK H+++ + D + +ALVD Y+KCG + A K F
Sbjct: 104 YTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE 163
Query: 456 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI-SLKPDAITFVALLSACRHRGLV 514
+ RD++ +N MI+G++ H I LF +M +I L P+ T V + A G +
Sbjct: 164 M--PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGAL 221
Query: 515 ELGE 518
G+
Sbjct: 222 REGK 225
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 397 IIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK-LASALVDMYSKCGNIAYAEKSFQL 455
+ +++L C L LG+ H ++L+ L + + L +Y+ C + A F
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 456 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 515
+ + I +++MI YA + F KA+ L+ +ML ++P T+ +L AC ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 516 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
G K S + ++Y +VD Y + +LE A++ ++P + D W A ++
Sbjct: 121 DG-KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKR-DMVAWNAMISG 178
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 231/440 (52%), Gaps = 38/440 (8%)
Query: 230 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 289
WNTL GYV+N +L L+ +M + G+ ++ T V+ A + L G +HA V+
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136
Query: 290 KND-GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 348
K GC +GI + L+ Y G ++ A+
Sbjct: 137 KYGFGC----------------------------LGI----VATELVMMYMKFGELSSAE 164
Query: 349 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 408
LF+S+ ++ V W A + V++ + F + +A+ D+ +V++L AC
Sbjct: 165 FLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM-CADAVQFDSFTVVSMLSACGQL 223
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 468
+L +G++ + + +++ + + +A +DM+ KCGN A F+ + R+V+ ++
Sbjct: 224 GSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEM--KQRNVVSWST 281
Query: 469 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF--MSMKE 526
MI GYA +G +A+ LF M L+P+ +TF+ +LSAC H GLV G+++F M
Sbjct: 282 MIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN 341
Query: 527 DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVK 586
D N+ P HYACMVD+ GR LE+A EF++K+P++ D IWGA L AC ++ + L +
Sbjct: 342 DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQ 401
Query: 587 QAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGI 646
+ + L++ D GS +V L+N+YAA GKW+ + ++R +MR K+ S + E I
Sbjct: 402 KVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKI 461
Query: 647 HVFTSGDTSHSKADAIYSTL 666
H F GD SH ++ AIY L
Sbjct: 462 HFFNRGDKSHPQSKAIYEKL 481
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 170/448 (37%), Gaps = 107/448 (23%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +++G + QL+ + G + A ++FD+M F WN + Y+
Sbjct: 31 HAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV----- 85
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT-IGMDEITLTTM 134
R+ + + S+L L+ +M RD + DE T +
Sbjct: 86 ------------RNQLPFESLL---------------LYKKM---RDLGVRPDEFTYPFV 115
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
+ ++L G +H+++VK + L+ MY K G A +F
Sbjct: 116 VKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLF-------- 167
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
++ + D V+WN +A VQ G AL F +M
Sbjct: 168 -------------------------ESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
++++ T+ S+LSAC L L++G+ ++ K + N V + +D + KCGN
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 262
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTAL---CS 367
A ++ + ++ + S++I GY+ G+ +A LF ++ NYV + + CS
Sbjct: 263 AARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
Query: 368 GYVKSQQCEAVFKLF-------------------------------REFRTTEALIPDTM 396
+ + F L EF + PDT
Sbjct: 323 HAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTG 382
Query: 397 IIVNVLGACAIQATLSLGKQTHAYILRT 424
I +LGACA+ + LG++ ++ T
Sbjct: 383 IWGALLGACAVHRDMILGQKVADVLVET 410
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 99/195 (50%), Gaps = 6/195 (3%)
Query: 342 GNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNV 401
G+M A+++FD + + +W L GYV++Q L+++ R + PD V
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDL-GVRPDEFTYPFV 115
Query: 402 LGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR 461
+ A + S G HA++++ +A+ LV MY K G ++ AE F+ + +
Sbjct: 116 VKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFE--SMQVK 173
Query: 462 DVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF 521
D++ +N +A G A++ F +M +++ D+ T V++LSAC G +E+GE+ +
Sbjct: 174 DLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIY 233
Query: 522 MSMKE---DYNVLPE 533
++ D N++ E
Sbjct: 234 DRARKEEIDCNIIVE 248
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 15 DHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYI 70
D VQ + S + C QL G L+ +++D+ N NA + ++
Sbjct: 204 DAVQFDSFTVVSMLSACGQL-------GSLEIGEEIYDRARKEEIDCNIIVENARLDMHL 256
Query: 71 KAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEIT 130
K N AR LF+ R++VS+++M+ YA +G AL LF MQ+ + + + +T
Sbjct: 257 KCGNTEAARVLFEEMKQRNVVSWSTMIVGYA-MNGDSREALTLFTTMQN--EGLRPNYVT 313
Query: 131 LTTMLNLSAKLRVVCYGKQMHSYMVKTAN---DLSKFALSSLIDMYSKCGSFREAYNVFS 187
+L+ + +V GK+ S MV++ + + K + ++D+ + G EAY
Sbjct: 314 FLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 188 GCDGVVDLVSKNAMVAAC 205
D A++ AC
Sbjct: 374 KMPVEPDTGIWGALLGAC 391
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 18/177 (10%)
Query: 415 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 474
K+ HA +LRT + L + L++ G++ YA + F + + L+N + GY
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKP--RIFLWNTLFKGYV 85
Query: 475 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 534
+ +++ L+++M + ++PD T+ ++ A G G + +
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVK-------- 137
Query: 535 YHYAC-------MVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTL 584
Y + C +V MY + +L A EF+ + D W AFL C N+ +
Sbjct: 138 YGFGCLGIVATELVMMYMKFGELSSA-EFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/533 (28%), Positives = 250/533 (46%), Gaps = 70/533 (13%)
Query: 138 SAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVS 197
SA+ R G Q+H Y+VK+ L ++LI+ YSK ++ F D +
Sbjct: 25 SARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFE--DSPQKSST 82
Query: 198 KNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG 257
+ + +C + QN +L +M+
Sbjct: 83 TWSSIISC-------------------------------FAQNELPWMSLEFLKKMMAGN 111
Query: 258 IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 317
+ + H L S +C L +G+ VH L +K ++ FV S +VD Y KCG E
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCG-----E 166
Query: 318 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 377
VYA +++FD + +RN V W+ + GY + + E
Sbjct: 167 IVYA--------------------------RKMFDEMPQRNVVTWSGMMYGYAQMGENEE 200
Query: 378 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 437
LF+E E L + +V+ CA L LG+Q H +++ + + S+LV
Sbjct: 201 ALWLFKE-ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLV 259
Query: 438 DMYSKCGNIAYAEKSFQLVTDSD-RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 496
+YSKCG E ++Q+ + +++ ++N M+ YA H K I+LF+ M +KP
Sbjct: 260 SLYSKCG---VPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKP 316
Query: 497 DAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 556
+ ITF+ +L+AC H GLV+ G +F MKE + P HYA +VDM GR +L++A+E
Sbjct: 317 NFITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEV 375
Query: 557 MRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKW 616
+ +PI ++WGA L +C ++ NT L A +++ ++ + ++ L+N YAA+G++
Sbjct: 376 ITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRF 435
Query: 617 NEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCL 669
+ + RK +R + K G SW+ N +H F +G+ H K+ IY L L
Sbjct: 436 EDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAEL 488
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 67/258 (25%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H ++K+G + +F + L+ +Y+ G + A K+FD+MP RN +W+ ++ Y +
Sbjct: 139 HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGEN 198
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+A LF A LF + + +++ + ++++
Sbjct: 199 EEALWLFKEA---------------------------LF-------ENLAVNDYSFSSVI 224
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
++ A ++ G+Q+H +K++ D S F SSL+ +YSKCG AY VF+ ++
Sbjct: 225 SVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFN------EV 278
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
KN + WN ++ Y Q+ + ++ + LF M
Sbjct: 279 PVKNLGI---------------------------WNAMLKAYAQHSHTQKVIELFKRMKL 311
Query: 256 KGIEYNQHTLASVLSACT 273
G++ N T +VL+AC+
Sbjct: 312 SGMKPNFITFLNVLNACS 329
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 224/434 (51%), Gaps = 33/434 (7%)
Query: 231 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK 290
N++I Y + E ALT+F EM+ + ++++ VL AC + G+ +H L +K
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 291 NDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRL 350
+ ++ FV + +V+ Y + G A V + ++ + +SL++ Y KG + +A+ L
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 351 FDSLSERNYVVWTALCSGYVKSQQCEAVFKLF-----REFRTTEALI------------- 392
FD + ERN W + SGY + + ++F R+ + A++
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 393 -------------PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDM 439
PD +V+VL ACA +LS G+ H YI + + ++ LA+ALVDM
Sbjct: 289 EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDM 348
Query: 440 YSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAI 499
YSKCG I A + F+ S RDV +N +I+ + HG A+++F EM+ KP+ I
Sbjct: 349 YSKCGKIDKALEVFR--ATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGI 406
Query: 500 TFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRK 559
TF+ +LSAC H G+++ K F M Y V P I HY CMVD+ GR ++E+A E + +
Sbjct: 407 TFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNE 466
Query: 560 IPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEM 619
IP + + + L ACK ++ LL++ + S Y Q++N+YA++G+W ++
Sbjct: 467 IPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKV 526
Query: 620 GRIRKEMRGKEATK 633
R+ MR + +
Sbjct: 527 IDGRRNMRAERVNR 540
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 82/383 (21%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H IKSGL + +F N L+++Y G + A K+ D+MP R+A SWN+++ AY++ +
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLV 222
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGAD------------------------------G 105
+ARALFD R++ S+N M+S YA A G
Sbjct: 223 DEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVG 282
Query: 106 CDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFA 165
C L++F +M T D TL ++L+ A L + G+ +H Y+ K ++ F
Sbjct: 283 CYNEVLEVFNKMLD-DSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFL 341
Query: 166 LSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN 225
++L+DMYSKC GK+D AL VF +
Sbjct: 342 ATALVDMYSKC--------------------------------GKIDKALEVFRATSK-R 368
Query: 226 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVH 285
D +WN++I+ +G + AL +F EM+ +G + N T VLSAC + L + +
Sbjct: 369 DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLF 428
Query: 286 ALV---------LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGI-KSPFATSSLI 335
++ +++ GC +VD + G + AE + I ++ SL+
Sbjct: 429 EMMSSVYRVEPTIEHYGC--------MVDLLGRMGKIEEAEELVNEIPADEASILLESLL 480
Query: 336 AGYSSKGNMTKAKRLFDSLSERN 358
G + +A+R+ + L E N
Sbjct: 481 GACKRFGQLEQAERIANRLLELN 503
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 110/523 (21%), Positives = 201/523 (38%), Gaps = 111/523 (21%)
Query: 12 VYRDHVQAIKSGLASSIFTCNQLIHLYSIHG---LLQEAHKLFDKMPHRNAFSWNAIIMA 68
+ + H +K+GL F+ ++L+ + + + AH + +++ N F+ N++I A
Sbjct: 55 IQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRA 114
Query: 69 YIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDE 128
Y + VAL +F M + D+
Sbjct: 115 YANS--------------------------------STPEVALTVFREMLLG--PVFPDK 140
Query: 129 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG 188
+ T +L A G+Q+H +K+ F ++L+++Y + G F A V
Sbjct: 141 YSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDR 200
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN----------------------- 225
V D VS N++++A G +D A +F + E N
Sbjct: 201 MP-VRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEV 259
Query: 226 -------DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE-YNQHTLASVLSACTGLKC 277
D VSWN ++ Y G L +F +M++ E + TL SVLSAC L
Sbjct: 260 FDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGS 319
Query: 278 LKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG 337
L G+ VH + K+ F+++ +VD Y KC
Sbjct: 320 LSQGEWVHVYIDKHGIEIEGFLATALVDMYSKC--------------------------- 352
Query: 338 YSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI 397
G + KA +F + S+R+ W ++ S + ++F E E P+ +
Sbjct: 353 ----GKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEM-VYEGFKPNGIT 407
Query: 398 IVNVLGACAIQATLSLGK---QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQ 454
+ VL AC L + + + + R + ++ +VD+ + G I AE +
Sbjct: 408 FIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHY--GCMVDLLGRMGKIEEAE---E 462
Query: 455 LVTD--SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
LV + +D IL ++ G +A ++ +L+++L+
Sbjct: 463 LVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLR 505
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 158/582 (27%), Positives = 264/582 (45%), Gaps = 71/582 (12%)
Query: 75 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
++ AR +FD R + YNSM+ Y+ D V L L+ +M + + I D T T
Sbjct: 66 ISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEV-LRLYDQMIAEK--IQPDSSTFTMT 122
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
+ V+ G+ + V F SS++++Y KCG EA +F
Sbjct: 123 IKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF-------- 174
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
GKM D + W T++ G+ Q G +A+ + EM
Sbjct: 175 --------------GKMAK-----------RDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
+G ++ + +L A L K+G+ VH + + N V + +VD Y K G +
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 374
A R+F + + V W +L SG+ ++
Sbjct: 270 VAS-------------------------------RVFSRMMFKTAVSWGSLISGFAQNGL 298
Query: 375 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 434
F+ E ++ PD + +V VL AC+ +L G+ H YIL+ + +D A+
Sbjct: 299 ANKAFEAVVEMQSL-GFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTAT 356
Query: 435 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 494
AL+DMYSKCG ++ + + F+ V +D++ +N MI+ Y HG + + LF +M + ++
Sbjct: 357 ALMDMYSKCGALSSSREIFEHV--GRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNI 414
Query: 495 KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 554
+PD TF +LLSA H GLVE G+ +F M Y + P HY C++D+ R ++E+A+
Sbjct: 415 EPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEAL 474
Query: 555 EFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEG 614
+ + + IW A L+ C + N ++ A ++L++ D+ ++N +A
Sbjct: 475 DMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATAN 534
Query: 615 KWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSH 656
KW E+ ++RK MR K+PG S I V + F D SH
Sbjct: 535 KWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH 576
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 193/452 (42%), Gaps = 77/452 (17%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
+ F ++++ Y+K + +A LF + RD++ + +M++ +A A G A++ + M
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQA-GKSLKAVEFYREM 208
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
Q+ + G D + + +L S L G+ +H Y+ +T ++ +SL+DMY+K G
Sbjct: 209 QN--EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVG 266
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
A VFS F VSW +LI+G+
Sbjct: 267 FIEVASRVFS---------------------------------RMMFKTAVSWGSLISGF 293
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 297
QNG +A +EM G + + TL VL AC+ + LK G+ VH +LK ++
Sbjct: 294 AQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH-VLDR 352
Query: 298 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 357
++ ++D Y KCG + + ++ +G K +++I+ Y GN + LF ++E
Sbjct: 353 VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 358 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 417
N + PD ++L A + + G+
Sbjct: 413 N--------------------------------IEPDHATFASLLSALSHSGLVEQGQHW 440
Query: 418 HAYIL-RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYA 474
+ ++ + K+ EK L+D+ ++ G + E++ ++ D + ++ +++G
Sbjct: 441 FSVMINKYKIQPSEKHYVCLIDLLARAGRV---EEALDMINSEKLDNALPIWVALLSGCI 497
Query: 475 HHGFENKAIQLFQEMLKISLKPDAITFVALLS 506
+H N ++ + L PD+I L+S
Sbjct: 498 NH--RNLSVGDIAANKILQLNPDSIGIQTLVS 527
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 331 TSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEA 390
+ LIA G ++ A+++FD L +R V+ ++ Y + + + V +L+ + E
Sbjct: 53 SRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQM-IAEK 111
Query: 391 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 450
+ PD+ + AC L G+ + D + S+++++Y KCG + AE
Sbjct: 112 IQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAE 171
Query: 451 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 510
F + + RDVI + M+ G+A G KA++ ++EM D + + LL A
Sbjct: 172 VLFGKM--AKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGD 229
Query: 511 RGLVELGEK---FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDAT 567
G ++G + NV+ E +VDMY + +E A ++ + A
Sbjct: 230 LGDTKMGRSVHGYLYRTGLPMNVVVE----TSLVDMYAKVGFIEVASRVFSRMMFKT-AV 284
Query: 568 IWGAFLNACKINNNTTLVKQAEEELLKVEA 597
WG+ ++ N L +A E ++++++
Sbjct: 285 SWGSLISGFAQNG---LANKAFEAVVEMQS 311
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 68/253 (26%)
Query: 21 KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARA 80
++GL ++ L+ +Y+ G ++ A ++F +M + A SW
Sbjct: 245 RTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWG----------------- 287
Query: 81 LFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAK 140
S++S +A +G A + MQS D +TL +L ++
Sbjct: 288 --------------SLISGFA-QNGLANKAFEAVVEMQSL--GFQPDLVTLVGVLVACSQ 330
Query: 141 LRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNA 200
+ + G+ +H Y++K + L + ++L+DMYSKCG+ + +F
Sbjct: 331 VGSLKTGRLVHCYILKR-HVLDRVTATALMDMYSKCGALSSSREIFEHV----------- 378
Query: 201 MVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY 260
G+ D+ V WNT+I+ Y +G + ++LF++M E IE
Sbjct: 379 --------GRKDL--------------VCWNTMISCYGIHGNGQEVVSLFLKMTESNIEP 416
Query: 261 NQHTLASVLSACT 273
+ T AS+LSA +
Sbjct: 417 DHATFASLLSALS 429
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 416 QTHAYILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 474
Q HA+++ T L ++ L+ + G I+YA K F + R V +YN MI Y+
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDEL--PQRGVSVYNSMIVVYS 92
Query: 475 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 534
++ ++L+ +M+ ++PD+ TF + AC ++E GE + D+ ++
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCK-AVDFGYKNDV 151
Query: 535 YHYACMVDMYGRGNQLEKA 553
+ + ++++Y + ++++A
Sbjct: 152 FVCSSVLNLYMKCGKMDEA 170
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 160/575 (27%), Positives = 275/575 (47%), Gaps = 62/575 (10%)
Query: 82 FDSASHRDLVSY-NSMLSAYAGAD----GCDTVALDLFARMQSARDT--------IGMDE 128
F R++V+Y +L + G D GC L + + D I
Sbjct: 45 FTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSS 104
Query: 129 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG 188
+T++L K+ + GK +H+ +K + + L+ +YS+ G A F
Sbjct: 105 HAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAF-- 162
Query: 189 CDGVVD--LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 246
D + + VS N+++ G++D A VF K PE D VSWN +I+ Y + G M A
Sbjct: 163 -DDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE-KDAVSWNLIISSYAKKGDMGNA 220
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 306
+LF A+ LK+ N +
Sbjct: 221 CSLF----------------------------------SAMPLKSPASWNILIGG----- 241
Query: 307 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 366
Y C M+ A + + + K+ + ++I+GY+ G++ A+ LF +S+++ +V+ A+
Sbjct: 242 YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI 301
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALI-PDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 425
+ Y ++ + + KLF + + I PD + + +V+ A + S G +YI
Sbjct: 302 ACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHG 361
Query: 426 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 485
+ +D+ L+++L+D+Y K G+ A A K F + + +D + Y+ MI G +G +A L
Sbjct: 362 IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNL--NKKDTVSYSAMIMGCGINGMATEANSL 419
Query: 486 FQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 545
F M++ + P+ +TF LLSA H GLV+ G K F SMK D+N+ P HY MVDM G
Sbjct: 420 FTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMVDMLG 478
Query: 546 RGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 605
R +LE+A E ++ +P+Q +A +WGA L A ++NN + A +K+E D
Sbjct: 479 RAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSH 538
Query: 606 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 640
LA +Y++ G+W++ +R ++ K+ K GCSW+
Sbjct: 539 LAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWV 573
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 179/396 (45%), Gaps = 52/396 (13%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H QA+K+GL ++ L+ LYS G ++ A K FD + +N SWN+++ Y+++ L
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 186
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+AR +FD +D VS+N ++S+YA G A LF+ M +
Sbjct: 187 DEARRVFDKIPEKDAVSWNLIISSYA-KKGDMGNACSLFSAM----------PLKSPASW 235
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
N+ V C ++ + + ++I Y+K G + A +F L
Sbjct: 236 NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFR-------L 288
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+SK D + ++ +IA Y QNG + AL LF +M+E
Sbjct: 289 MSK--------------------------KDKLVYDAMIACYTQNGKPKDALKLFAQMLE 322
Query: 256 KG--IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
+ I+ ++ TL+SV+SA + L G V + + ++ + +S+ ++D Y K G+
Sbjct: 323 RNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDF 382
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGY 369
A +++ + K + S++I G G T+A LF ++ E+ N V +T L S Y
Sbjct: 383 AKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAY 442
Query: 370 VKSQQCEAVFKLFREFR--TTEALIPDTMIIVNVLG 403
S + +K F + E I+V++LG
Sbjct: 443 SHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLG 478
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/589 (28%), Positives = 270/589 (45%), Gaps = 83/589 (14%)
Query: 60 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL-FARMQ 118
F N ++ AY K A LFD R++V++N ++ DG L F +
Sbjct: 72 FLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLS 131
Query: 119 SARDT-IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
T + +D ++ ++ L + G Q+H MVK + S F +SL+ Y KCG
Sbjct: 132 RILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCG 191
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
EA VF + V+D D V WN L++ Y
Sbjct: 192 LIVEARRVF---EAVLD------------------------------RDLVLWNALVSSY 218
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQH-----TLASVLSACTGLKCLKLGKCVHALVLKND 292
V NG ++ A L M G + N+ T +S+LSAC ++ GK +HA++ K
Sbjct: 219 VLNGMIDEAFGLLKLM---GSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFK-- 269
Query: 293 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 352
S QF P AT+ L+ Y+ +++ A+ F+
Sbjct: 270 -VSYQF---------------------------DIPVATA-LLNMYAKSNHLSDARECFE 300
Query: 353 SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 412
S+ RN V W A+ G+ ++ + +LF + E L PD + +VL +CA + +
Sbjct: 301 SMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQM-LLENLQPDELTFASVLSSCAKFSAIW 359
Query: 413 LGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG 472
KQ A + + +A++L+ YS+ GN++ A F + + D ++ + +I
Sbjct: 360 EIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPD--LVSWTSVIGA 417
Query: 473 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 532
A HGF +++Q+F+ ML+ L+PD ITF+ +LSAC H GLV+ G + F M E Y +
Sbjct: 418 LASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEA 476
Query: 533 EIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEEL 592
E HY C++D+ GR +++A + + +P + AF C I+ +K ++L
Sbjct: 477 EDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKL 536
Query: 593 LKVEADNGSRYVQLANVYAAEGKWNEMGRIRK-EMRGKEATKLPGCSWI 640
L++E Y L+N Y +EG WN+ +RK E R K PGCSW+
Sbjct: 537 LEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 172/438 (39%), Gaps = 109/438 (24%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H +K GL SS F L+H Y GL+ EA ++F+ + R+ WNA++ +Y+
Sbjct: 165 HCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYV----- 219
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
N M+ A L M S ++ D T +++L
Sbjct: 220 -----------------LNGMIDE----------AFGLLKLMGSDKNRFRGDYFTFSSLL 252
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ + GKQ+H+ + K + ++L++MY+K +A F V ++
Sbjct: 253 SACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESM-VVRNV 307
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
VS NAM I G+ QNG A+ LF +M+
Sbjct: 308 VSWNAM--------------------------------IVGFAQNGEGREAMRLFGQMLL 335
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+ ++ ++ T ASVLS+C + K V A+V K G DF
Sbjct: 336 ENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKK----------GSADFLS------- 378
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 375
+SLI+ YS GN+++A F S+ E + V WT++
Sbjct: 379 --------------VANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFA 424
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACA----IQATLSLGKQTHAYILRTKLNMDEK 431
E ++F + L PD + + VL AC+ +Q L K+ + K+ +++
Sbjct: 425 EESLQMFESM--LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFY---KIEAEDE 479
Query: 432 LASALVDMYSKCGNIAYA 449
+ L+D+ + G I A
Sbjct: 480 HYTCLIDLLGRAGFIDEA 497
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 18/255 (7%)
Query: 327 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK-----SQQCEAVFKL 381
S F + L+ Y+ A +LFD + RN V W L G ++ + + F
Sbjct: 70 SLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCY 129
Query: 382 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYS 441
T+ + D + + ++ C + G Q H +++ L +++LV Y
Sbjct: 130 LSRILFTDVSL-DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYG 188
Query: 442 KCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML--KISLKPDAI 499
KCG I A + F+ V DRD++L+N +++ Y +G ++A L + M K + D
Sbjct: 189 KCGLIVEARRVFEAVL--DRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYF 246
Query: 500 TFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMR 558
TF +LLSACR +E G++ + K Y +I +++MY + N L A E
Sbjct: 247 TFSSLLSACR----IEQGKQIHAILFKVSYQF--DIPVATALLNMYAKSNHLSDARECFE 300
Query: 559 KIPIQIDATIWGAFL 573
+ ++ + W A +
Sbjct: 301 SMVVR-NVVSWNAMI 314
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 152/540 (28%), Positives = 248/540 (45%), Gaps = 74/540 (13%)
Query: 162 SKFALSSLIDMYSKCGSFREAYNVFS----GCDGVVDLVSKNAMVAACCRD--------- 208
S + S I+ C FREA+ +F C V + + +A+V AC R
Sbjct: 86 SGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRV 145
Query: 209 --------------------------GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
G + A +F + PE N S+ ++I+G+V G
Sbjct: 146 YGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERN-LYSYYSIISGFVNFGN 204
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
A LF M E+ + HT A +L A GL + +GK +H LK N FVS G
Sbjct: 205 YVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCG 264
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
++D Y KC G++ A+ F+ + E+ V W
Sbjct: 265 LIDMYSKC-------------------------------GDIEDARCAFECMPEKTTVAW 293
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
+ +GY E L + R + I D + ++ A L L KQ HA ++
Sbjct: 294 NNVIAGYALHGYSEEALCLLYDMRDSGVSI-DQFTLSIMIRISTKLAKLELTKQAHASLI 352
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
R + +ALVD YSK G + A F + +++I +N ++ GYA+HG A
Sbjct: 353 RNGFESEIVANTALVDFYSKWGRVDTARYVFDKL--PRKNIISWNALMGGYANHGRGTDA 410
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 542
++LF++M+ ++ P+ +TF+A+LSAC + GL E G + F+SM E + + P HYACM++
Sbjct: 411 VKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIE 470
Query: 543 MYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 602
+ GR L++A+ F+R+ P++ +W A LNAC++ N L + E+L + +
Sbjct: 471 LLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGN 530
Query: 603 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 662
YV + N+Y + GK E + + + K + +P C+W+ V + H F SGD S + +
Sbjct: 531 YVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETV 590
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 170/382 (44%), Gaps = 47/382 (12%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N I++ ++K + AR LFD R+L SY S++S + G A +LF M +
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNF-GNYVEAFELFKMMWE--E 218
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
+ T ML SA L + GKQ+H +K + F LIDMYSKCG +A
Sbjct: 219 LSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDA 278
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
F C PE TV+WN +IAGY +GY
Sbjct: 279 RCAFE-----------------CM---------------PE-KTTVAWNNVIAGYALHGY 305
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
E AL L +M + G+ +Q TL+ ++ T L L+L K HA +++N S ++
Sbjct: 306 SEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTA 365
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL----SERN 358
+VDFY K G + A V+ + K+ + ++L+ GY++ G T A +LF+ + N
Sbjct: 366 LVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPN 425
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ--ATLSLGKQ 416
+V + A+ S S E +++F + P M AC I+ L +
Sbjct: 426 HVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHY-----ACMIELLGRDGLLDE 480
Query: 417 THAYILRTKLNMDEKLASALVD 438
A+I R L + +AL++
Sbjct: 481 AIAFIRRAPLKTTVNMWAALLN 502
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 36/215 (16%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
N F +I Y K ++ AR F+ + V++N++++ YA G AL L M
Sbjct: 258 NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYA-LHGYSEEALCLLYDM 316
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
+ + + +D+ TL+ M+ +S KL + KQ H+ +++ + A ++L+D YSK
Sbjct: 317 RDS--GVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKW- 373
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
G++D A VF K P N +SWN L+ GY
Sbjct: 374 -------------------------------GRVDTARYVFDKLPRKN-IISWNALMGGY 401
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 272
+G A+ LF +MI + N T +VLSAC
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSAC 436
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H I++G S I L+ YS G + A +FDK+P +N SWNA++ Y
Sbjct: 348 HASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRG 407
Query: 76 TQARALFD 83
T A LF+
Sbjct: 408 TDAVKLFE 415
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 233/442 (52%), Gaps = 40/442 (9%)
Query: 229 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 288
+WN L GY + ++ ++ EM +GI+ N+ T +L AC L G+ + V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 289 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 348
LK+ DF VY G ++LI Y + + A+
Sbjct: 140 LKHG-----------FDF-----------DVYVG---------NNLIHLYGTCKKTSDAR 168
Query: 349 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 408
++FD ++ERN V W ++ + V++ + VF+ F E + PD +V +L AC
Sbjct: 169 KVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEM-IGKRFCPDETTMVVLLSACG-- 225
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 468
LSLGK H+ ++ +L ++ +L +ALVDMY+K G + YA F+ + D ++V ++
Sbjct: 226 GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVD--KNVWTWSA 283
Query: 469 MIAGYAHHGFENKAIQLFQEMLK-ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 527
MI G A +GF +A+QLF +M+K S++P+ +TF+ +L AC H GLV+ G K+F M++
Sbjct: 284 MIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKI 343
Query: 528 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKIN---NNTTL 584
+ + P + HY MVD+ GR +L +A +F++K+P + DA +W L+AC I+ ++ +
Sbjct: 344 HKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGI 403
Query: 585 VKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVEN 644
++ ++ L+++E V +AN +A W E +R+ M+ + K+ G S + +
Sbjct: 404 GEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGG 463
Query: 645 GIHVFTSGDTSHSKADAIYSTL 666
H F SG S+ +IY L
Sbjct: 464 SFHRFFSGYDPRSEYVSIYELL 485
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 165/389 (42%), Gaps = 66/389 (16%)
Query: 31 CNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIK-------AHNLTQARALFD 83
C+ + HL IHG + H ++ ++ I++ + A +L AR L
Sbjct: 23 CSSIKHLLQIHGQI-----------HLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLL 71
Query: 84 SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRV 143
+S ++N + Y+ +D ++ +++ M+ R I +++T +L A
Sbjct: 72 HSSDSTPSTWNMLSRGYSSSDS-PVESIWVYSEMK--RRGIKPNKLTFPFLLKACASFLG 128
Query: 144 VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVA 203
+ G+Q+ ++K D + ++LI +Y C +A VF ++ +N
Sbjct: 129 LTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFD------EMTERN---- 178
Query: 204 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 263
VSWN+++ V+NG + F EMI K ++
Sbjct: 179 -----------------------VVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDET 215
Query: 264 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 323
T+ +LSAC G L LGK VH+ V+ + N + + +VD Y K G + YA V+ +
Sbjct: 216 TMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERM 273
Query: 324 GIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER-----NYVVWTALCSGYVKSQQCEAV 378
K+ + S++I G + G +A +LF + + NYV + + + +
Sbjct: 274 VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDG 333
Query: 379 FKLFREFRTTEALIPDTMI----IVNVLG 403
+K F E + P MI +V++LG
Sbjct: 334 YKYFHEMEKIHKIKP-MMIHYGAMVDILG 361
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 171/572 (29%), Positives = 279/572 (48%), Gaps = 86/572 (15%)
Query: 76 TQARALFDSASHRDLVSYNSMLSAYA-GADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
T A LFD RDL S NS LS++ + DT+AL L Q R + + T T +
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFL----QIHRASPDLSSHTFTPV 90
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
L + L G+Q+H+ M+K + + ++LIDMYSK G ++ VF
Sbjct: 91 LGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVF-------- 142
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
++ E D VSWN L++G+++NG + AL +F M
Sbjct: 143 -------------------------ESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMY 177
Query: 255 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 314
+ +E ++ TL+SV+ C LK L+ GK VHA+V+ V G
Sbjct: 178 RERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT---GRDLVVLG------------ 222
Query: 315 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS-ERNYVVWTALCSGYVKSQ 373
+++I+ YSS G + +A ++++SL+ + V+ +L SG ++++
Sbjct: 223 -----------------TAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNR 265
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 433
+ F L R P+ ++ + L C+ + L +GKQ H LR D KL
Sbjct: 266 NYKEAFLLMSRQR------PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLC 319
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK-- 491
+ L+DMY KCG I A F+ + + V+ + MI YA +G KA+++F+EM +
Sbjct: 320 NGLMDMYGKCGQIVQARTIFRAI--PSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEG 377
Query: 492 ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLE 551
+ P+++TF+ ++SAC H GLV+ G++ F MKE Y ++P HY C +D+ + + E
Sbjct: 378 SGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETE 437
Query: 552 ---KAVEFMRKIPIQ-IDATIWGAFLNACKINNNTTLVKQAEEELLK-VEADNGSRYVQL 606
+ VE M + Q I IW A L+AC +N + T + L++ +N S YV +
Sbjct: 438 EIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLV 497
Query: 607 ANVYAAEGKWNEMGRIRKEMRGKEATKLPGCS 638
+N YAA GKW+ + +R +++ K K G S
Sbjct: 498 SNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 150/341 (43%), Gaps = 72/341 (21%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H IK G + + LI +YS +G L ++ ++F+ + ++ SWNA++ +++
Sbjct: 107 HALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLR---- 162
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+G AL +FA M R+ + + E TL++++
Sbjct: 163 ----------------------------NGKGKEALGVFAAMY--RERVEISEFTLSSVV 192
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
A L+++ GKQ+H+ +V T DL +++I YS G EA V++
Sbjct: 193 KTCASLKILQQGKQVHAMVVVTGRDLVVLG-TAMISFYSSVGLINEAMKVYN-------- 243
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+LNV D V N+LI+G ++N + A L
Sbjct: 244 ------------------SLNV------HTDEVMLNSLISGCIRNRNYKEAFLLMSRQ-- 277
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
N L+S L+ C+ L +GK +H + L+N S+ + +G++D Y KCG +
Sbjct: 278 ---RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQ 334
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 356
A +++ I KS + +S+I Y+ G+ KA +F + E
Sbjct: 335 ARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCE 375
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 222/441 (50%), Gaps = 39/441 (8%)
Query: 227 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 286
T + + G G ++ A+ L + G++ T A +L C K GK +HA
Sbjct: 76 TEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHA 132
Query: 287 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTK 346
FV ++ Y K L+ Y+ G++
Sbjct: 133 ---------QMFVVGFALNEYLKV----------------------KLLILYALSGDLQT 161
Query: 347 AKRLFDSLSERNYVVWTALCSGYV-KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGAC 405
A LF SL R+ + W A+ SGYV K + E +F ++ + R ++PD +V AC
Sbjct: 162 AGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLF-IYYDMRQNR-IVPDQYTFASVFRAC 219
Query: 406 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 465
+ L GK+ HA +++ + + + SALVDMY KC + + + F + S R+VI
Sbjct: 220 SALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQL--STRNVIT 277
Query: 466 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMK 525
+ +I+GY +HG ++ ++ F++M + +P+ +TF+ +L+AC H GLV+ G + F SMK
Sbjct: 278 WTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMK 337
Query: 526 EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLV 585
DY + PE HYA MVD GR +L++A EF+ K P + +WG+ L AC+I+ N L+
Sbjct: 338 RDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLL 397
Query: 586 KQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENG 645
+ A + L+++ NG YV AN YA+ G ++R++M K PG S I ++
Sbjct: 398 ELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGE 457
Query: 646 IHVFTSGDTSHSKADAIYSTL 666
+H F DTSH ++ IY +
Sbjct: 458 VHRFMKDDTSHRLSEKIYKKV 478
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 29/345 (8%)
Query: 216 NVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL 275
+ +++ + D + WN +I+GYVQ G + L ++ +M + I +Q+T ASV AC+ L
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 276 KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLI 335
L+ GK HA+++K SN V S +VD Y KC + V+ + ++ +SLI
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 336 AGYSSKGNMTKAKRLFDSLSERN--------YVVWTALCSGYVKSQQCEAVFKLFREFRT 387
+GY G +++ + F+ + E VV TA G + + E + + R++
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY-G 341
Query: 388 TEALIPDTMIIVNVLG-ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI 446
E +V+ LG A +Q + + +++++ + +L+ GN+
Sbjct: 342 IEPEGQHYAAMVDTLGRAGRLQ-------EAYEFVMKSPCKEHPPVWGSLLGACRIHGNV 394
Query: 447 AYAE----KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 502
E K +L + + Y V GYA G A ++ ++M +K D
Sbjct: 395 KLLELAATKFLELDPTNGGN---YVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQ 451
Query: 503 ALLSACRHRGLVE-----LGEKFFMSMKEDYNVLPEIYHYACMVD 542
L HR + + L EK + + E + +I +Y +D
Sbjct: 452 IELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPDGLD 496
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 36/208 (17%)
Query: 65 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 124
+++ Y + +L A LF S RDL+ +N+M+S Y G + L ++ M+ R I
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYV-QKGLEQEGLFIYYDMRQNR--I 205
Query: 125 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 184
D+ T ++ + L + +GK+ H+ M+K + S+L+DMY KC SF + +
Sbjct: 206 VPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHR 265
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 244
VF L ++N ++W +LI+GY +G +
Sbjct: 266 VFD------QLSTRN---------------------------VITWTSLISGYGYHGKVS 292
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLSAC 272
L F +M E+G N T VL+AC
Sbjct: 293 EVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 144/535 (26%), Positives = 264/535 (49%), Gaps = 86/535 (16%)
Query: 104 DGCDTVALDLFARMQSARDTIGMDEITL-TTMLNLSAKLRVVCYGKQMH----SYMVKTA 158
+ D+V DL SA+ I + E + ++L LR + +G ++H Y+++
Sbjct: 70 EALDSVITDLET---SAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNN 126
Query: 159 NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF 218
+S S L+ +Y+ CG A+ VF D +SK RD
Sbjct: 127 LGIS----SKLVRLYASCGYAEVAHEVF-------DRMSK--------RD---------- 157
Query: 219 WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL 278
+ +WN+LI+GY + G E A+ L+ +M E G++ ++ T VL AC G+ +
Sbjct: 158 ------SSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSV 211
Query: 279 KLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGY 338
++G+ +H ++K + +V + +V Y KCG++
Sbjct: 212 QIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDI------------------------- 246
Query: 339 SSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 398
KA+ +FD + ++YV W ++ +GY+ +FR + PD + I
Sbjct: 247 ------VKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFR-LMVQNGIEPDKVAI 299
Query: 399 VNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 458
+VL + G+Q H +++R + + +A+AL+ +YSK G + A F + +
Sbjct: 300 SSVLARVL---SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE 356
Query: 459 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 518
RD + +N +I+ H + ++ F++M + + KPD ITFV++LS C + G+VE GE
Sbjct: 357 --RDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGE 411
Query: 519 KFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFM-RKIPIQIDATIWGAFLNACK 577
+ F M ++Y + P++ HYACMV++YGR +E+A + +++ ++ T+WGA L AC
Sbjct: 412 RLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACY 471
Query: 578 INNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEM--RGKE 630
++ NT + + A + L ++E DN + L +Y+ + ++ R+R+ M RG E
Sbjct: 472 LHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 117/542 (21%), Positives = 221/542 (40%), Gaps = 150/542 (27%)
Query: 24 LASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNA--FSWNAIIMAYIKAHNLTQARAL 81
L +++ ++L+ LY+ G + AH++FD+M R++ F+WN++I Y + A AL
Sbjct: 123 LRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMAL 182
Query: 82 FDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKL 141
+ Q A D + D T +L +
Sbjct: 183 Y----------------------------------FQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 142 RVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAM 201
V G+ +H +VK + L++L+ MY+KCG +A NVF D++
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVF-------DMIPHKDY 261
Query: 202 VAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYN 261
V SWN+++ GY+ +G + AL +F M++ GIE +
Sbjct: 262 V--------------------------SWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPD 295
Query: 262 QHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA 321
+ ++SVL+ K G+ +H V++ M + SV
Sbjct: 296 KVAISSVLARVLSFKH---GRQLHGWVIRR--------------------GMEWELSV-- 330
Query: 322 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKL 381
++LI YS +G + +A +FD + ER+ V W A+ S + K+ K
Sbjct: 331 ---------ANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKY 378
Query: 382 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA--SALVDM 439
F + A PD + V+VL CA + G++ + ++ + +D K+ + +V++
Sbjct: 379 FEQMHRANAK-PDGITFVSVLSLCANTGMVEDGERLFS-LMSKEYGIDPKMEHYACMVNL 436
Query: 440 YSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAI 499
Y + G + E+++ ++ QEM L+
Sbjct: 437 YGRAGMM---EEAYSMIV-----------------------------QEM---GLEAGPT 461
Query: 500 TFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH-YACMVDMYGRGNQLEKAVEFMR 558
+ ALL AC G ++GE ++ + + + P+ H + ++ +Y + + E VE +R
Sbjct: 462 VWGALLYACYLHGNTDIGE---VAAQRLFELEPDNEHNFELLIRIYSKAKRAED-VERVR 517
Query: 559 KI 560
++
Sbjct: 518 QM 519
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 15/214 (7%)
Query: 370 VKSQQCEAVFKLFREFRTTEAL---IPDTMIIVNVLGACAIQATLSLGKQTH----AYIL 422
+ Q EA+ + + T+ + + I ++L C + G + H Y+L
Sbjct: 64 IHRTQLEALDSVITDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLL 123
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
R L ++S LV +Y+ CG A + F ++ D +N +I+GYA G A
Sbjct: 124 RNNLG----ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDA 179
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM-KEDYNVLPEIYHYACMV 541
+ L+ +M + +KPD TF +L AC G V++GE + KE + ++Y +V
Sbjct: 180 MALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGY--DVYVLNALV 237
Query: 542 DMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
MY + + KA IP + D W + L
Sbjct: 238 VMYAKCGDIVKARNVFDMIPHK-DYVSWNSMLTG 270
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 219 bits (557), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 175/673 (26%), Positives = 314/673 (46%), Gaps = 94/673 (13%)
Query: 7 RDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRN----AFSW 62
R+AL Y + V+A G+ + FT +L+ S GL F K H N
Sbjct: 207 REALQFYSEMVKA---GVPPNEFTFVKLLGASSFLGLE------FGKTIHSNIIVRGIPL 257
Query: 63 NAIIMA-----YIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 117
N ++ Y + + A + +S+ +D+ + S++S + A+ F M
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKE-AVGTFLEM 316
Query: 118 QSARDTIGM--DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 175
+S +G+ + T + +L+L + +R + +GKQ+HS +K + S ++L+DMY K
Sbjct: 317 RS----LGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 176 C-GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 234
C S EA VF AMV+ + VSW TLI
Sbjct: 373 CSASEVEASRVF------------GAMVSP---------------------NVVSWTTLI 399
Query: 235 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC 294
G V +G+++ L +EM+++ +E N TL+ VL AC+ L+ ++ +HA +L+
Sbjct: 400 LGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD 459
Query: 295 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 354
V + +VD Y + YA +V S+
Sbjct: 460 GEMVVGNSLVDAYASSRKVDYAWNV-------------------------------IRSM 488
Query: 355 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 414
R+ + +T+L + + + + E + + + + D + + + A A L G
Sbjct: 489 KRRDNITYTSLVTRFNELGKHEMALSVI-NYMYGDGIRMDQLSLPGFISASANLGALETG 547
Query: 415 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 474
K H Y +++ + + ++LVDMYSKCG++ A+K F+ + DV+ +N +++G A
Sbjct: 548 KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP--DVVSWNGLVSGLA 605
Query: 475 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 534
+GF + A+ F+EM +PD++TF+ LLSAC + L +LG ++F MK+ YN+ P++
Sbjct: 606 SNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQV 665
Query: 535 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLK 594
HY +V + GR +LE+A + + ++ +A I+ L AC+ N +L + + L
Sbjct: 666 EHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLA 725
Query: 595 VEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDT 654
+ + + Y+ LA++Y GK + R M K +K G S + V+ +H F S D
Sbjct: 726 LAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDV 785
Query: 655 SH-SKADAIYSTL 666
+ K + IY+ +
Sbjct: 786 TRVDKTNGIYAEI 798
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 151/646 (23%), Positives = 273/646 (42%), Gaps = 84/646 (13%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H IK GL ++ CN L+ LY + A KLFD+M HR F+W +I A+ K+
Sbjct: 46 HCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEF 105
Query: 76 TQARALFD----SASHRDLVSYNSMLSAYAGA------------------DGCDTV---- 109
A +LF+ S +H + +++S++ + AG +G V
Sbjct: 106 ASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSL 165
Query: 110 ------------ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKT 157
A +LF+ +Q+A D I+ T M++ R Q +S MVK
Sbjct: 166 SDLYSKCGQFKEACELFSSLQNA------DTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 158 ANDLSKFALSSLIDMYSKCG-SFREAYNVFSGCDGV-VDLVSKNAMVAACCRDGKMDMAL 215
++F L+ S G F + + G+ +++V K ++V + KM+ A+
Sbjct: 220 GVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 216 NVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL 275
V + E D W ++++G+V+N + A+ F+EM G++ N T +++LS C+ +
Sbjct: 280 RVLNSSGE-QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAV 338
Query: 276 KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLI 335
+ L GK +H+ +K + V + +VD Y KC
Sbjct: 339 RSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKC------------------------- 373
Query: 336 AGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 395
+ +A R+F ++ N V WT L G V + F L E E + P+
Sbjct: 374 -----SASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE-VEPNV 427
Query: 396 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 455
+ + VL AC+ + + HAY+LR ++ + + ++LVD Y+ + YA +
Sbjct: 428 VTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIR- 486
Query: 456 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 515
+ RD I Y ++ + G A+ + M ++ D ++ +SA + G +E
Sbjct: 487 -SMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALE 545
Query: 516 LGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLN 574
G+ S+K ++ + + +VDMY + LE A + +I D W ++
Sbjct: 546 TGKHLHCYSVKSGFSGAASVLN--SLVDMYSKCGSLEDAKKVFEEIATP-DVVSWNGLVS 602
Query: 575 ACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMG 620
N + A EE+ E + S + + G+ ++G
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLG 648
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 198/360 (55%), Gaps = 7/360 (1%)
Query: 311 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 370
G ++ +++ + ++L+ YS+ N T A ++FD + +R+ V W L S Y+
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 371 KSQQCEAVFKLFREFR--TTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 428
++++ V LF + + + PD + + L ACA L GKQ H +I L+
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 429 DEKLASALVDMYSKCGNIAYAEKSFQLVTD-SDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
L++ LV MYS+CG++ +K++Q+ +R+V+ + +I+G A +GF +AI+ F
Sbjct: 251 ALNLSNTLVSMYSRCGSM---DKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFN 307
Query: 488 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE-DYNVLPEIYHYACMVDMYGR 546
EMLK + P+ T LLSAC H GLV G FF M+ ++ + P ++HY C+VD+ GR
Sbjct: 308 EMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGR 367
Query: 547 GNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQL 606
L+KA ++ + ++ D+TIW L AC+++ + L ++ L++++A+ YV L
Sbjct: 368 ARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLL 427
Query: 607 ANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
N Y+ GKW ++ +R M+ K PGCS I ++ +H F D SH + + IY L
Sbjct: 428 LNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKML 487
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 42 GLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYA 101
G LQ K+F ++ ++ Y N T A +FD RD VS+N + S Y
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 102 GADGCDTVALDLFARMQSARD-TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAND 160
V L LF +M++ D + D +T L A L + +GKQ+H ++ +
Sbjct: 191 RNKRTRDV-LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLS 249
Query: 161 LSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK 220
+ ++L+ MYS+CGS MD A VF+
Sbjct: 250 GALNLSNTLVSMYSRCGS--------------------------------MDKAYQVFYG 277
Query: 221 NPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 273
E N VSW LI+G NG+ + A+ F EM++ GI + TL +LSAC+
Sbjct: 278 MRERN-VVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACS 329
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 133/346 (38%), Gaps = 72/346 (20%)
Query: 214 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM---IEKGIEYNQHTLASVLS 270
A VF + P+ DTVSWN L + Y++N L LF +M ++ ++ + T L
Sbjct: 167 ACKVFDEIPK-RDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQ 225
Query: 271 ACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFA 330
AC L L GK VH + +N +S+ +V Y +CG+M A V+ G
Sbjct: 226 ACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYG-------- 277
Query: 331 TSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEA 390
+ ERN V WTAL SG + + + F E
Sbjct: 278 -----------------------MRERNVVSWTALISGLAMNGFGKEAIEAFNEM-LKFG 313
Query: 391 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 450
+ P+ + +L AC +H+ ++ + +++ S
Sbjct: 314 ISPEEQTLTGLLSAC-----------SHSGLVAEGMMFFDRMRSG--------------- 347
Query: 451 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 510
F++ + Y ++ +KA L + M +KPD+ + LL ACR
Sbjct: 348 -EFKIKPNLHH----YGCVVDLLGRARLLDKAYSLIKSM---EMKPDSTIWRTLLGACRV 399
Query: 511 RGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 556
G VELGE+ + E E Y +++ Y + EK E
Sbjct: 400 HGDVELGERVISHLIELKA--EEAGDYVLLLNTYSTVGKWEKVTEL 443
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 16/253 (6%)
Query: 347 AKRLFDSLSERNYVVWTALCSGYVKSQ-QCEAVFKLFREFRTTEALIPDTMIIVNVLGAC 405
++RL +LS N ++ + SQ CE F+LFR R +L + + L C
Sbjct: 70 SQRLNPTLSHCNTMI-----RAFSLSQTPCEG-FRLFRSLRRNSSLPANPLSSSFALKCC 123
Query: 406 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 465
L G Q H I D L + L+D+YS C N A K F + RD +
Sbjct: 124 IKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEI--PKRDTVS 181
Query: 466 YNVMIAGYAHHGFENKAIQLFQEM---LKISLKPDAITFVALLSACRHRGLVELGEKFFM 522
+NV+ + Y + + LF +M + +KPD +T + L AC + G ++ G++
Sbjct: 182 WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD 241
Query: 523 SMKEDYNVLPEIYHYA-CMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNN 581
+ E N L + + +V MY R ++KA + + + + W A ++ +N
Sbjct: 242 FIDE--NGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNGF 298
Query: 582 TTLVKQAEEELLK 594
+A E+LK
Sbjct: 299 GKEAIEAFNEMLK 311
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 230/442 (52%), Gaps = 54/442 (12%)
Query: 211 MDMALNVFWKNPEFNDTVS-WNTLIAGYVQNGYMER---ALTLFIEMIEKG---IEYNQH 263
+ AL++ + P N +V +NTLI+ V N + A +L+ +++ + N+
Sbjct: 56 LSYALSILRQIP--NPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEF 113
Query: 264 TLASVLSACTGL--KCLKLGKCVHALVLK--NDGCSNQFVSSGIVDFYCKCGNMRYAESV 319
T S+ A +G + + G+ +HA VLK ++FV + +V FY CG +R
Sbjct: 114 TYPSLFKA-SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLR----- 167
Query: 320 YAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC---E 376
+A+ LF+ + E + W L + Y S++ E
Sbjct: 168 --------------------------EARSLFERIREPDLATWNTLLAAYANSEEIDSDE 201
Query: 377 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 436
V LF + P+ + +V ++ +CA G H Y+L+ L +++ + ++L
Sbjct: 202 EVLLLFMRMQVR----PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSL 257
Query: 437 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 496
+D+YSKCG +++A K F + S RDV YN MI G A HGF + I+L++ ++ L P
Sbjct: 258 IDLYSKCGCLSFARKVFDEM--SQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVP 315
Query: 497 DAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 556
D+ TFV +SAC H GLV+ G + F SMK Y + P++ HY C+VD+ GR +LE+A E
Sbjct: 316 DSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEEC 375
Query: 557 MRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKW 616
++K+P++ +AT+W +FL + + + + + A + LL +E +N YV L+N+YA +W
Sbjct: 376 IKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRW 435
Query: 617 NEMGRIRKEMRGKEATKLPGCS 638
++ + R+ M+ K PG S
Sbjct: 436 TDVEKTRELMKDHRVNKSPGIS 457
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 193/479 (40%), Gaps = 108/479 (22%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H Q I GL+ + ++L+HL S L A + ++P+ + F +N +I + + HN
Sbjct: 29 HAQIITIGLSHHTYPLSKLLHLSST-VCLSYALSILRQIPNPSVFLYNTLISSIVSNHNS 87
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT-IGMDEITLTTM 134
TQ +A L+ ++ S+R + +E T ++
Sbjct: 88 TQTH-----------------------------LAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 135 LNLSA-KLRVVCYGKQMHSYMVKTANDLS--KFALSSLIDMYSKCGSFREAYNVFSGCDG 191
S + +G+ +H++++K ++ +F ++L+ Y+ CG REA ++F
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFE---- 174
Query: 192 VVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM---ERALT 248
R + D+A +WNTL+A Y + + E L
Sbjct: 175 ---------------RIREPDLA--------------TWNTLLAAYANSEEIDSDEEVLL 205
Query: 249 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 308
LF+ M + N+ +L +++ +C L G H VLKN+ NQFV + ++D Y
Sbjct: 206 LFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYS 262
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 368
KCG + + A+++FD +S+R+ + A+ G
Sbjct: 263 KCGCLSF-------------------------------ARKVFDEMSQRDVSCYNAMIRG 291
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 428
+ +L++ ++ L+PD+ V + AC+ + G Q ++ +
Sbjct: 292 LAVHGFGQEGIELYKSL-ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNS-MKAVYGI 349
Query: 429 DEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 485
+ K+ LVD+ + G + AE+ + + + + + + H FE I L
Sbjct: 350 EPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIAL 408
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 158/370 (42%), Gaps = 67/370 (18%)
Query: 41 HGLLQEAHKL-FDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSA 99
HG AH L F + + + F A++ Y L +AR+LF+ DL ++N++L+A
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 100 YAGADGCDT--VALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKT 157
YA ++ D+ L LF RMQ + +E++L ++ A L G H Y++K
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQ-----VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKN 245
Query: 158 ANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNV 217
L++F +SLID+YSKCG A VF D +S+
Sbjct: 246 NLTLNQFVGTSLIDLYSKCGCLSFARKVF-------DEMSQ------------------- 279
Query: 218 FWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT---- 273
D +N +I G +G+ + + L+ +I +G+ + T +SAC+
Sbjct: 280 -------RDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGL 332
Query: 274 ---GLKCLKLGKCVHALVLKND--GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 328
GL+ K V+ + K + GC +VD + G + AE + +K P
Sbjct: 333 VDEGLQIFNSMKAVYGIEPKVEHYGC--------LVDLLGRSGRLEEAEECIKKMPVK-P 383
Query: 329 FAT--SSLIAGYSSKGNMTKAKRLFDSL------SERNYVVWTALCSGYVKSQQCEAVFK 380
AT S + + G+ + + L + NYV+ + + +G + E +
Sbjct: 384 NATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRE 443
Query: 381 LFREFRTTEA 390
L ++ R ++
Sbjct: 444 LMKDHRVNKS 453
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 101/220 (45%), Gaps = 13/220 (5%)
Query: 304 VDFYCKCGNMRYAESVYA---GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 360
++ KC +++ + ++A IG+ S + SS ++ A + + +
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPNPSVF 72
Query: 361 VWTALCSGYV---KSQQCEAVFKLFREFRTTEA--LIPDTMIIVNVLGACAIQATLSL-G 414
++ L S V S Q F L+ + ++ + + P+ ++ A A G
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG 132
Query: 415 KQTHAYILR--TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG 472
+ HA++L+ +N D + +ALV Y+ CG + A F+ + + D+ +N ++A
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREP--DLATWNTLLAA 190
Query: 473 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 512
YA+ + ++ +++ ++P+ ++ VAL+ +C + G
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLG 230
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 256/516 (49%), Gaps = 47/516 (9%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N++I AY K N A +F A D+VS+N+++ A A ++ AL LF M
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSEN-PLKALKLFVSM--PEH 310
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
++ T ++L +S+ ++++ G+Q+H ++K + ++LID Y+KCG+ ++
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
F D + D + V WN L++GY N
Sbjct: 371 RLCF---DYIRD------------------------------KNIVCWNALLSGYA-NKD 396
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
L+LF++M++ G ++T ++ L +C C+ + +H+++++ N +V S
Sbjct: 397 GPICLSLFLQMLQMGFRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLSS 452
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG-YSSKGNMTKAKRLFDSLSERNYVV 361
++ Y K M A + + +++AG YS +G ++ +L +L + + V
Sbjct: 453 LMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVS 512
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
W + +S E V +LF+ + + PD V++L C+ L+LG H I
Sbjct: 513 WNIAIAACSRSDYHEEVIELFKHMLQSN-IRPDKYTFVSILSLCSKLCDLTLGSSIHGLI 571
Query: 422 LRTKLN-MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 480
+T + D + + L+DMY KCG+I K F+ ++++I + +I+ HG+
Sbjct: 572 TKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFE--ETREKNLITWTALISCLGIHGYGQ 629
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 540
+A++ F+E L + KPD ++F+++L+ACRH G+V+ G F MK DY V PE+ HY C
Sbjct: 630 EALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMK-DYGVEPEMDHYRCA 688
Query: 541 VDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNAC 576
VD+ R L++A +R++P DA +W FL+ C
Sbjct: 689 VDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 149/631 (23%), Positives = 252/631 (39%), Gaps = 121/631 (19%)
Query: 22 SGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARAL 81
S L ++ CN +I LY G + A K+FD+MP RN S+N II Y K ++ +A +
Sbjct: 43 SVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGV 102
Query: 82 FDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKL 141
F + + S +S D A + D T +L L +L
Sbjct: 103 FSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRL 162
Query: 142 RVVCYGKQMHSYM----VKTANDLSK------------FALSSLIDMYSKCGSFREA--Y 183
++ +Q+ M ++T N + F L+ M + S E+
Sbjct: 163 DLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGA---SLTESSFL 219
Query: 184 NVFSGCDGVVDL-VSK------------------NAMVAACCRDGKMDMALNVFWKNPEF 224
V G V DL +SK N++++A + G MA +F +
Sbjct: 220 GVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSW 279
Query: 225 NDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCV 284
D VSWN +I ++ +AL LF+ M E G NQ T SVL + ++ L G+ +
Sbjct: 280 -DIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI 338
Query: 285 HALVLKNDGCSNQFV-SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 343
H +++KN GC V + ++DFY KCGN+
Sbjct: 339 HGMLIKN-GCETGIVLGNALIDFYAKCGNLE----------------------------- 368
Query: 344 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQ--CEAVF--KLFREFRTTEALIPDTMIIV 399
++ FD + ++N V W AL SGY C ++F L FR TE
Sbjct: 369 --DSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTE------YTFS 420
Query: 400 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCG--------------- 444
L +C + +Q H+ I+R ++ + S+L+ Y+K
Sbjct: 421 TALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGP 476
Query: 445 ------NIA---------YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 489
NI Y E + T D + +N+ IA + + + I+LF+ M
Sbjct: 477 TSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHM 536
Query: 490 LKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGN 548
L+ +++PD TFV++LS C + LG + K D++ + + ++DMYG+
Sbjct: 537 LQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC-ADTFVCNVLIDMYGKCG 595
Query: 549 QLEKAVEFMRKIPIQIDATIWGAFLNACKIN 579
+ ++ + + + W A ++ I+
Sbjct: 596 SIRSVMKVFEETR-EKNLITWTALISCLGIH 625
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 398 IVNVLGACAIQATLSLGKQTHAY--ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 455
+V++L C + + K HA L + L + + ++ +Y K G ++ A K F
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 456 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 515
+ +R+ + +N +I GY+ +G +KA +F EM P+ T LLS C +
Sbjct: 75 M--PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASLDVRA 131
Query: 516 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQ 563
+ +S+K + + + C++ +YGR + LE A + +P +
Sbjct: 132 GTQLHGLSLKYGL-FMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 159/587 (27%), Positives = 274/587 (46%), Gaps = 88/587 (14%)
Query: 63 NAIIMAYIKAHNLTQARALFDSA--SHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSA 120
NA+I Y + A +F+ + RD V++N ++ AG ++ L +F +M A
Sbjct: 228 NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDES--LLVFRKMLEA 285
Query: 121 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 180
++ ++T +++ G Q+H +KT + ++ + MYS F
Sbjct: 286 --SLRPTDLTFVSVM---GSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFG 340
Query: 181 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 240
A+ VF ++ E D V+WNT+I+ Y Q
Sbjct: 341 AAHKVF---------------------------------ESLEEKDLVTWNTMISSYNQA 367
Query: 241 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 300
+ A++++ M G++ ++ T S+L+ L L++ V A ++K
Sbjct: 368 KLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIK---------- 414
Query: 301 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATS-SLIAGYSSKGNMTKAKRLFDSLSERNY 359
G+ S S +LI+ YS G + KA LF+ +N
Sbjct: 415 ----------------------FGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNL 452
Query: 360 VVWTALCSGYVKSQQCEAVFKLFREFRTTEA-LIPDTMIIVNVLGACAIQATLSLGKQTH 418
+ W A+ SG+ + + F +E ++PD + +L C ++L LG QTH
Sbjct: 453 ISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTH 512
Query: 419 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 478
AY+LR + + +AL++MYS+CG I + + F + S++DV+ +N +I+ Y+ HG
Sbjct: 513 AYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQM--SEKDVVSWNSLISAYSRHGE 570
Query: 479 ENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 537
A+ ++ M + + PDA TF A+LSAC H GLVE G + F SM E + V+ + H+
Sbjct: 571 GENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHF 630
Query: 538 ACMVDMYGRGNQLEKAVEFM----RKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELL 593
+C+VD+ GR L++A + + I ++D +W A +AC + + L K + L+
Sbjct: 631 SCLVDLLGRAGHLDEAESLVKISEKTIGSRVD--VWWALFSACAAHGDLKLGKMVAKLLM 688
Query: 594 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 640
+ E D+ S YVQL+N+YA G W E R+ + A K GCSW+
Sbjct: 689 EKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 129/574 (22%), Positives = 254/574 (44%), Gaps = 83/574 (14%)
Query: 6 VRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAI 65
+RD + + H AI+SGL N L+ LY G L K FD++ + +SW +
Sbjct: 70 LRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTL 129
Query: 66 IMAYIKAHNLTQARALFDSASHRDLVS-YNSMLSAYAGADGCDTVALDLFARMQSARDTI 124
+ A K ++ A +FD RD V+ +N+M++ G +++LF M + +
Sbjct: 130 LSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITG-CKESGYHETSVELFREMH--KLGV 186
Query: 125 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 184
D+ T+L++ + +GKQ+HS ++K ++ +++LI MY C
Sbjct: 187 RHDKFGFATILSM-CDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNC-------- 237
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY-M 243
+V AC + D+A+ D V++N +I G G+
Sbjct: 238 --------------QVVVDACLVFEETDVAVR---------DQVTFNVVIDGLA--GFKR 272
Query: 244 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 303
+ +L +F +M+E + T SV+ +C+ C +G VH L +K
Sbjct: 273 DESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKT------------ 317
Query: 304 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 363
G +Y +++ + YSS + A ++F+SL E++ V W
Sbjct: 318 -------GYEKYT------------LVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWN 358
Query: 364 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 423
+ S Y +++ ++ +++ + PD ++L A L + + A I++
Sbjct: 359 TMISSYNQAKLGKSAMSVYKRMHII-GVKPDEFTFGSLL---ATSLDLDVLEMVQACIIK 414
Query: 424 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 483
L+ ++++AL+ YSK G I A+ F+ +++I +N +I+G+ H+GF + +
Sbjct: 415 FGLSSKIEISNALISAYSKNGQIEKADLLFE--RSLRKNLISWNAIISGFYHNGFPFEGL 472
Query: 484 QLFQEML--KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 541
+ F +L ++ + PDA T LLS C + LG + + + E ++
Sbjct: 473 ERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR-HGQFKETLIGNALI 531
Query: 542 DMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
+MY + ++ ++E ++ + D W + ++A
Sbjct: 532 NMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISA 564
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 222/476 (46%), Gaps = 59/476 (12%)
Query: 110 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 169
AL LFA + T+ D+ +++ + + LR +G Q+H Y +++ ++L
Sbjct: 40 ALKLFADVHRCT-TLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTL 98
Query: 170 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS 229
+ +Y + G+ F D D+ S +++A + G ++ A VF K PE +D
Sbjct: 99 LSLYERLGNLASLKKKFDEIDEP-DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAI 157
Query: 230 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 289
WN +I G ++GY E ++ LF EM + G+ +++ A++LS C L GK VH+LV+
Sbjct: 158 WNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD-YGSLDFGKQVHSLVI 216
Query: 290 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 349
K + F++S +V+ +LI Y + + A
Sbjct: 217 K----AGFFIASSVVN---------------------------ALITMYFNCQVVVDACL 245
Query: 350 LFDS--LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAI 407
+F+ ++ R+ V + + G ++ E++ +FR+ +L P + V+V+G+C+
Sbjct: 246 VFEETDVAVRDQVTFNVVIDGLAGFKRDESLL-VFRKMLEA-SLRPTDLTFVSVMGSCSC 303
Query: 408 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 467
A +G Q H ++T +++A + MYS + A K F+ + ++D++ +N
Sbjct: 304 AA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESL--EEKDLVTWN 358
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE----KFFMS 523
MI+ Y A+ +++ M I +KPD TF +LL+ ++E+ + KF +S
Sbjct: 359 TMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLS 418
Query: 524 MKEDYNVLPEIYHYACMVDMYGRGNQLEKA----VEFMRKIPIQIDATIWGAFLNA 575
K + + ++ Y + Q+EKA +RK I +A I G + N
Sbjct: 419 SKIEIS--------NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNG 466
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 142/281 (50%), Gaps = 7/281 (2%)
Query: 231 NTLIAGYVQNGYMERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 289
N + G ++G AL LF ++ + +Q++++ ++ L+ G VH +
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 290 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 349
++ + VS+ ++ Y + GN+ + + I ++ ++L++ G++ A
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 350 LFDSLSERNYV-VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 408
+FD + ER+ V +W A+ +G +S E +LFRE + D +L C
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKL-GVRHDKFGFATILSMCDY- 202
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 468
+L GKQ H+ +++ + + +AL+ MY C + A F+ + RD + +NV
Sbjct: 203 GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNV 262
Query: 469 MIAGYAHHGFE-NKAIQLFQEMLKISLKPDAITFVALLSAC 508
+I G A GF+ ++++ +F++ML+ SL+P +TFV+++ +C
Sbjct: 263 VIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC 301
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 33/184 (17%)
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMII-VNVLGACAIQATLSLGKQTHAYILRTK 425
+G +S + KLF + L PD + + + A ++ T+ G Q H Y +R+
Sbjct: 29 TGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTI-FGGQVHCYAIRSG 87
Query: 426 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD------------------------- 460
L +++ L+ +Y + GN+A +K F + + D
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 461 -----RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 515
DV ++N MI G G+ +++LF+EM K+ ++ D F +LS C + G ++
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDY-GSLD 206
Query: 516 LGEK 519
G++
Sbjct: 207 FGKQ 210
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 241/516 (46%), Gaps = 78/516 (15%)
Query: 127 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 186
DE T ++ + + V G +H +++ D +S +D Y KC A VF
Sbjct: 109 DEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVF 168
Query: 187 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 246
G+M PE N VSW L+ YV++G +E A
Sbjct: 169 ----------------------GEM----------PERN-AVSWTALVVAYVKSGELEEA 195
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 306
++F M E+ N G N +VD
Sbjct: 196 KSMFDLMPER----------------------------------NLGSWN-----ALVDG 216
Query: 307 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 366
K G++ A+ ++ + + + +S+I GY+ G+M A+ LF+ + W+AL
Sbjct: 217 LVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALI 276
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 426
GY ++ Q FK+F E + + PD I+V ++ AC+ L ++ +Y L ++
Sbjct: 277 LGYAQNGQPNEAFKVFSEM-CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSY-LHQRM 334
Query: 427 NM--DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 484
N + AL+DM +KCG++ A K F+ + RD++ Y M+ G A HG ++AI+
Sbjct: 335 NKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQ--RDLVSYCSMMEGMAIHGCGSEAIR 392
Query: 485 LFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY 544
LF++M+ + PD + F +L C LVE G ++F M++ Y++L HY+C+V++
Sbjct: 393 LFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLL 452
Query: 545 GRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYV 604
R +L++A E ++ +P + A+ WG+ L C ++ NT + + L ++E + YV
Sbjct: 453 SRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYV 512
Query: 605 QLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 640
L+N+YAA +W ++ +R +M TK+ G SWI
Sbjct: 513 LLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 155/346 (44%), Gaps = 44/346 (12%)
Query: 217 VFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI-EYNQHTLASVLSACTGL 275
VF + P T WN LI GY +++ + M+ G+ +++T V+ C+
Sbjct: 65 VFERVPS-PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNN 123
Query: 276 KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLI 335
+++G VH LVL+ + V + VDFY KC ++ A V+ + ++ + ++L+
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 336 AGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 395
Y G + +AK +FD + ERN W AL G VKS KLF E +P
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDE-------MPKR 236
Query: 396 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 455
II +Y ++++D Y+K G++ A F+
Sbjct: 237 DII--------------------SY-------------TSMIDGYAKGGDMVSARDLFEE 263
Query: 456 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 515
DV ++ +I GYA +G N+A ++F EM ++KPD V L+SAC G E
Sbjct: 264 ARGV--DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFE 321
Query: 516 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP 561
L EK + + N Y ++DM + +++A + ++P
Sbjct: 322 LCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMP 367
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 154/339 (45%), Gaps = 50/339 (14%)
Query: 34 LIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSY 93
L+ Y G L+EA +FD MP RN SWNA++ +K+ +L A+ LFD RD++SY
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY 241
Query: 94 NSMLSAYAGADGCDTV-ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHS 152
SM+ Y A G D V A DLF + AR G+D + ++ A+ ++ S
Sbjct: 242 TSMIDGY--AKGGDMVSARDLF---EEAR---GVDVRAWSALILGYAQNGQPNEAFKVFS 293
Query: 153 YMVKTANDLSKFALSSLIDMYSKCGSFR----------EAYNVFSGCDGVVDLVSKNAMV 202
M +F + L+ S+ G F + N FS V L+ NA
Sbjct: 294 EMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNA-- 351
Query: 203 AACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQ 262
+ G MD A +F + P+ D VS+ +++ G +G A+ LF +M+++GI ++
Sbjct: 352 ----KCGHMDRAAKLFEEMPQ-RDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDE 406
Query: 263 HTLASVLSAC-------TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
+L C GL+ +L + ++++ D S IV+ + G ++
Sbjct: 407 VAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDH------YSCIVNLLSRTGKLKE 460
Query: 316 AESVYAGIGIKS-PF-----ATSSLIAGYSSKGNMTKAK 348
A + IKS PF A SL+ G S GN A+
Sbjct: 461 AYEL-----IKSMPFEAHASAWGSLLGGCSLHGNTEIAE 494
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 18/227 (7%)
Query: 350 LFDSLSERNYVVWTALCSGYV-KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 408
+F+ + +W L GY K E V L R RT A PD V+ C+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLAR-PDEYTFPLVMKVCSNN 123
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 468
+ +G H +LR + D + ++ VD Y KC ++ A K F + +R+ + +
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMP--ERNAVSWTA 181
Query: 469 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 528
++ Y G +A +F M + +L ++ AL+ GLV+ G+ ++ K+ +
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLG----SWNALVD-----GLVKSGD--LVNAKKLF 230
Query: 529 NVLP--EIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFL 573
+ +P +I Y M+D Y +G + A + + +D W A +
Sbjct: 231 DEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEAR-GVDVRAWSALI 276
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 164/610 (26%), Positives = 283/610 (46%), Gaps = 85/610 (13%)
Query: 24 LASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFD 83
L + + +C + + IHG + + DK + F+ + + +A+ ++ A ++F+
Sbjct: 31 LINDLRSCRDTVEVSRIHGYMVKTG--LDK----DDFAVSKL-LAFSSVLDIRYASSIFE 83
Query: 84 SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRV 143
S+ +L +N+M+ Y+ +D + A +F ++++ T +D + T L ++
Sbjct: 84 HVSNTNLFMFNTMIRGYSISDEPER-AFSVFNQLRAKGLT--LDRFSFITTLKSCSRELC 140
Query: 144 VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVA 203
V G+ +H + R + VF+ DL +NA++
Sbjct: 141 VSIGEGLHGI------------------------ALRSGFMVFT------DL--RNALIH 168
Query: 204 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 263
C GK+ A VF + P+ D V+++TL+ GY+Q AL LF M + + N
Sbjct: 169 FYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVS 228
Query: 264 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 323
TL S LSA + L L + H L +K I
Sbjct: 229 TLLSFLSAISDLGDLSGAESAHVLCIK--------------------------------I 256
Query: 324 GIKSPF-ATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLF 382
G+ ++LI Y G ++ A+R+FD ++ V W + Y K+ E L
Sbjct: 257 GLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLL 316
Query: 383 REFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSK 442
R+ + E + P++ V +L +CA +G+ + ++ +D L +ALVDMY+K
Sbjct: 317 RQMK-YEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAK 375
Query: 443 CGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK--ISLKPDAIT 500
G + A + F + D+DV + MI+GY HG +A+ LF +M + ++P+ IT
Sbjct: 376 VGLLEKAVEIFNRM--KDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEIT 433
Query: 501 FVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
F+ +L+AC H GLV G + F M E Y+ P++ HY C+VD+ GR QLE+A E +R +
Sbjct: 434 FLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNL 493
Query: 561 PIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKW---- 616
PI D+T W A L AC++ N L + L ++ + + + LA +A G
Sbjct: 494 PITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSL 553
Query: 617 -NEMGRIRKE 625
NE+ + RKE
Sbjct: 554 DNELNKGRKE 563
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 212/412 (51%), Gaps = 36/412 (8%)
Query: 230 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 289
WN ++ Y+++ A+ +++ M+ + ++++L V+ A + LGK +H++ +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 290 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 349
+ ++F SG + YCK G A++
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFE-------------------------------NARK 173
Query: 350 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 409
+FD ER W A+ G + + ++F + + + L PD +V+V +C
Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRS-GLEPDDFTMVSVTASCGGLG 232
Query: 410 TLSLGKQTHAYIL--RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 467
LSL Q H +L +T+ D + ++L+DMY KCG + A F+ + R+V+ ++
Sbjct: 233 DLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM--RQRNVVSWS 290
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 527
MI GYA +G +A++ F++M + ++P+ ITFV +LSAC H GLVE G+ +F MK +
Sbjct: 291 SMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSE 350
Query: 528 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQ 587
+ + P + HY C+VD+ R QL++A + + ++P++ + +WG + C+ + + +
Sbjct: 351 FELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEW 410
Query: 588 AEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSW 639
++++E N YV LANVYA G W ++ R+RK M+ K+ K+P S+
Sbjct: 411 VAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 117/519 (22%), Positives = 208/519 (40%), Gaps = 109/519 (21%)
Query: 24 LASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFD 83
LA+ + C L + IHG + + ++ D+ P AF WN I+ +YI+ + A
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRS-RILDQYP--IAFLWNNIMRSYIRHESPLDA----- 101
Query: 84 SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRV 143
+ Y G R T+ D +L ++ + ++
Sbjct: 102 -------------IQVYLGM----------------VRSTVLPDRYSLPIVIKAAVQIHD 132
Query: 144 VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVA 203
GK++HS V+ +F S I +Y K G F A
Sbjct: 133 FTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARK------------------- 173
Query: 204 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 263
VF +NPE SWN +I G G A+ +F++M G+E +
Sbjct: 174 -------------VFDENPE-RKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDF 219
Query: 264 TLASVLSACTGLKCLKLGKCVHALVL--KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA 321
T+ SV ++C GL L L +H VL K + S+ + + ++D Y KCG M A ++
Sbjct: 220 TMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFE 279
Query: 322 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKL 381
+ ++ + SS+I GY++ GN +A +C F+
Sbjct: 280 EMRQRNVVSWSSMIVGYAANGNTLEA-------------------------LEC---FRQ 311
Query: 382 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA--SALVDM 439
REF + P+ + V VL AC + GK T+ +++++ ++ L+ +VD+
Sbjct: 312 MREF----GVRPNKITFVGVLSACVHGGLVEEGK-TYFAMMKSEFELEPGLSHYGCIVDL 366
Query: 440 YSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAI 499
S+ G + A+K + + +V+++ ++ G G A + M+++ D +
Sbjct: 367 LSRDGQLKEAKKVVEEMP-MKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGV 425
Query: 500 TFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYA 538
+V L + RG+ + E+ MK Y YA
Sbjct: 426 -YVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSYA 463
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 11/226 (4%)
Query: 361 VWTALCSGYVKSQ-QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 419
+W + Y++ + +A+ R+T ++PD + V+ A +LGK+ H+
Sbjct: 84 LWNNIMRSYIRHESPLDAIQVYLGMVRST--VLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 420 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 479
+R DE S + +Y K G A K F + +R + +N +I G H G
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFD--ENPERKLGSWNAIIGGLNHAGRA 199
Query: 480 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS---MKEDYNVLPEIYH 536
N+A+++F +M + L+PD T V++ ++C GL +L F + ++ +I
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASC--GGLGDLSLAFQLHKCVLQAKTEEKSDIMM 257
Query: 537 YACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNT 582
++DMYG+ +++ A ++ Q + W + + N NT
Sbjct: 258 LNSLIDMYGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNT 302
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 215/420 (51%), Gaps = 16/420 (3%)
Query: 228 VSWNTLIAGYVQNGYMERALTLFIEMIEK-GIEYNQHTLASVLSACTGLKCLKLGKCVHA 286
+S ++ Y G E+AL LF++M + + H + L +C LG VHA
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 287 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTK 346
+K++ SN FV ++D Y KC ++ +A ++ I ++ +++I+ Y+ G + +
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 347 AKRLFDSLS-ERNYVVWTALCSGYVKSQ----QCEAVFKLFREFRTTEALIPDTMIIVNV 401
A L++++ N + A+ G V ++ + ++ EFR P+ + ++ +
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFR----FKPNLITLLAL 188
Query: 402 LGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS-- 459
+ AC+ L K+ H+Y R + +L S LV+ Y +CG+I Y QLV DS
Sbjct: 189 VSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYV----QLVFDSME 244
Query: 460 DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 519
DRDV+ ++ +I+ YA HG A++ FQEM + PD I F+ +L AC H GL +
Sbjct: 245 DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALV 304
Query: 520 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKIN 579
+F M+ DY + HY+C+VD+ R + E+A + ++ +P + A WGA L AC+
Sbjct: 305 YFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNY 364
Query: 580 NNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSW 639
L + A ELL VE +N + YV L +Y + G+ E R+R +M+ PG SW
Sbjct: 365 GEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 209/494 (42%), Gaps = 89/494 (18%)
Query: 90 LVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQ 149
L+S LS+YA G AL+LF +M S+ + +D + L A G
Sbjct: 12 LISLTKQLSSYAN-QGNHEQALNLFLQMHSSF-ALPLDAHVFSLALKSCAAAFRPVLGGS 69
Query: 150 MHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDG 209
+H++ VK+ + F +L+DMY KC S A +F + V NAM++ G
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQ-RNAVVWNAMISHYTHCG 128
Query: 210 KMDMALNVFWKNPEFNDTVSWNTLIAGYV--QNGYMERALTLFIEMIEKGIEYNQHTLAS 267
K+ A+ ++ + S+N +I G V ++G RA+ + +MIE + N TL +
Sbjct: 129 KVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSY-RAIEFYRKMIEFRFKPNLITLLA 187
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
++SAC+ + +L K +H+ +N + + SG+V+ Y +CG++ Y + V+ + +
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 387
A SSLI+ Y+ G+ E+ K F+E
Sbjct: 248 VVAWSSLISAYALHGD-------------------------------AESALKTFQEMEL 276
Query: 388 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK----LNMDEKLASALVDMYSKC 443
+ + PD + +NVL AC + L + Y R + L + S LVD+ S+
Sbjct: 277 AK-VTPDDIAFLNVLKAC---SHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRV 332
Query: 444 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 503
G A K Q + + KP A T+ A
Sbjct: 333 GRFEEAYKVIQAMPE------------------------------------KPTAKTWGA 356
Query: 504 LLSACRHRGLVELGEKFFMSMKEDYNVLPE-IYHYACMVDMY---GRGNQLEKAVEFMRK 559
LL ACR+ G +EL E ++ +E V PE +Y + +Y GR + E+ M++
Sbjct: 357 LLGACRNYGEIELAE---IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKE 413
Query: 560 IPIQI-DATIWGAF 572
+++ + W F
Sbjct: 414 SGVKVSPGSSWCLF 427
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 36/259 (13%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H ++KS S+ F L+ +Y + A KLFD++P RNA WNA+I Y +
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 76 TQARALFDSAS-HRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
+A L+++ + S+N+++ G + A++ + +M R + ITL +
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNL--ITLLAL 188
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
++ + + K++HSY + + S L++ Y +CGS VF D + D
Sbjct: 189 VSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVF---DSMED 245
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 254
D V+W++LI+ Y +G E AL F EM
Sbjct: 246 ------------------------------RDVVAWSSLISAYALHGDAESALKTFQEME 275
Query: 255 EKGIEYNQHTLASVLSACT 273
+ + +VL AC+
Sbjct: 276 LAKVTPDDIAFLNVLKACS 294
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 39/239 (16%)
Query: 35 IHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYN 94
IH Y+ L++ PH S ++ AY + ++ + +FDS RD+V+++
Sbjct: 204 IHSYAFRNLIE---------PHPQLKS--GLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 95 SMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKL----RVVCYGKQM 150
S++SAYA G AL F M+ A+ T D+I +L + + Y K+M
Sbjct: 253 SLISAYA-LHGDAESALKTFQEMELAKVTP--DDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 151 HS-YMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDG 209
Y ++ + D S L+D+ S+ G F EAY V + A++ AC G
Sbjct: 310 QGDYGLRASKD----HYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Query: 210 KMDMA-------LNVFWKNPEFNDTVSWNTLIAG--YVQNGYMERALTLFIEMIEKGIE 259
++++A L V +NP N ++ G Y+ G E A L ++M E G++
Sbjct: 366 EIELAEIAARELLMVEPENPA-------NYVLLGKIYMSVGRQEEAERLRLKMKESGVK 417
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 225/443 (50%), Gaps = 10/443 (2%)
Query: 202 VAACCRDGKMDMALNVF--WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 259
++ C D A VF +NP + + +N +I Y G +L+ F M +GI
Sbjct: 43 ISICGSLSNSDYANRVFSHIQNP---NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIW 99
Query: 260 YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESV 319
+++T A +L +C+ L L+ GKCVH +++ + G+V+ Y G M A+ V
Sbjct: 100 ADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKV 159
Query: 320 YAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVF 379
+ + ++ + +I G+ G++ + LF +SER+ V W ++ S K +
Sbjct: 160 FDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREAL 219
Query: 380 KLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD-EKLASALVD 438
+LF E + PD +V VL A L GK H+ + L D + +ALVD
Sbjct: 220 ELFCEM-IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 439 MYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS-LKPD 497
Y K G++ A F+ + R+V+ +N +I+G A +G I LF M++ + P+
Sbjct: 279 FYCKSGDLEAATAIFRKM--QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPN 336
Query: 498 AITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFM 557
TF+ +L+ C + G VE GE+ F M E + + HY MVD+ R ++ +A +F+
Sbjct: 337 EATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFL 396
Query: 558 RKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWN 617
+ +P+ +A +WG+ L+AC+ + + L + A EL+K+E N YV L+N+YA EG+W
Sbjct: 397 KNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQ 456
Query: 618 EMGRIRKEMRGKEATKLPGCSWI 640
++ ++R M+ K G S I
Sbjct: 457 DVEKVRTLMKKNRLRKSTGQSTI 479
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 173/377 (45%), Gaps = 44/377 (11%)
Query: 34 LIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSY 93
++ LY+ G + +A K+FD+M RN WN +I + + ++ + LF S R +VS+
Sbjct: 143 VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSW 202
Query: 94 NSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSY 153
NSM+S+ + G D AL+LF M DE T+ T+L +SA L V+ GK +HS
Sbjct: 203 NSMISSLSKC-GRDREALELFCEMID--QGFDPDEATVVTVLPISASLGVLDTGKWIHS- 258
Query: 154 MVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDM 213
TA G F++ V NA+V C+ G ++
Sbjct: 259 ---TAES---------------SGLFKDFITV------------GNALVDFYCKSGDLEA 288
Query: 214 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG-IEYNQHTLASVLSAC 272
A +F K N VSWNTLI+G NG E + LF MIE+G + N+ T VL+ C
Sbjct: 289 ATAIFRKMQRRN-VVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACC 347
Query: 273 TGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIKSPFAT 331
+ ++ G+ + L+++ + G +VD + G + A + + + A
Sbjct: 348 SYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAM 407
Query: 332 -SSLIAGYSSKGNMTKAKRL------FDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE 384
SL++ S G++ A+ + + NYV+ + L + + Q E V L ++
Sbjct: 408 WGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKK 467
Query: 385 FRTTEALIPDTMIIVNV 401
R ++ T+ V+V
Sbjct: 468 NRLRKSTGQSTICDVSV 484
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 184/326 (56%), Gaps = 5/326 (1%)
Query: 347 AKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 406
AK++ + S++N + W + GYV++ Q E K + + + P+ + L ACA
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 407 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILY 466
L K H+ ++ + + ++ L+SALVD+Y+KCG+I + + F V +D V ++
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRND--VSIW 234
Query: 467 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 526
N MI G+A HG +AI++F EM + PD+ITF+ LL+ C H GL+E G+++F M
Sbjct: 235 NAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR 294
Query: 527 DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVK 586
+++ P++ HY MVD+ GR ++++A E + +PI+ D IW + L++ + N L +
Sbjct: 295 RFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGE 354
Query: 587 QAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGI 646
A + L K ++ + YV L+N+Y++ KW ++R+ M + K G SW+ I
Sbjct: 355 IAIQNLSKAKSGD---YVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMI 411
Query: 647 HVFTSGDTSHSKADAIYSTLVCLYGK 672
H F +GDTSH + AIY L L K
Sbjct: 412 HRFKAGDTSHIETKAIYKVLEGLIQK 437
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 161/398 (40%), Gaps = 84/398 (21%)
Query: 149 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF----SGCDGVVDLVSKNAMVAA 204
Q H+ + K L S + Y +C A + S GV ++ N ++ +
Sbjct: 51 QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNI---NLIIES 107
Query: 205 CCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE-KGIEYNQH 263
+ G+ +A V +N + ++WN +I GYV+N E AL M+ I+ N+
Sbjct: 108 LMKIGESGLAKKVL-RNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKF 166
Query: 264 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 323
+ AS L+AC L L K VH+L++ + N +SS +VD Y KCG++ + V+
Sbjct: 167 SFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF--- 223
Query: 324 GIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFR 383
YS K N + +W A+ +G+ ++F
Sbjct: 224 --------------YSVKRN--------------DVSIWNAMITGFATHGLATEAIRVFS 255
Query: 384 EFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA--SALVDMYS 441
E E + PD++ + +L C+ L GK+ + R + ++ KL A+VD+
Sbjct: 256 EME-AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR-RFSIQPKLEHYGAMVDLLG 313
Query: 442 KCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITF 501
+ G + +A +L + M ++PD + +
Sbjct: 314 RAGRV---------------------------------KEAYELIESM---PIEPDVVIW 337
Query: 502 VALLSACRHRGLVELGEKFFMSMKE----DYNVLPEIY 535
+LLS+ R ELGE ++ + DY +L IY
Sbjct: 338 RSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIY 375
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 137/331 (41%), Gaps = 38/331 (11%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 122
N II + +K A+ + +AS ++++++N M+ Y + AL M S D
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEE-ALKALKNMLSFTD 160
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
I ++ + + L A+L + + K +HS M+ + +L+ S+L+D+Y+KCG +
Sbjct: 161 -IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTS 219
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
VF + ND WN +I G+ +G
Sbjct: 220 REVFYSV---------------------------------KRNDVSIWNAMITGFATHGL 246
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
A+ +F EM + + + T +L+ C+ L+ GK L+ + + G
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 303 -IVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERNYV 360
+VD + G ++ A + + I+ SL++ + N + +LS+
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSG 366
Query: 361 VWTALCSGYVKSQQCEAVFKLFREFRTTEAL 391
+ L + Y +++ E+ K+ RE + E +
Sbjct: 367 DYVLLSNIYSSTKKWESAQKV-RELMSKEGI 396
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 24/214 (11%)
Query: 17 VQAIKSGLASSIFTCNQLIHLYS---IHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAH 73
++ K ASS+ C +L L+ +H L+ D NA +A++ Y K
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLM------IDSGIELNAILSSALVDVYAKCG 214
Query: 74 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
++ +R +F S D+ +N+M++ +A G T A+ +F+ M++ + + D IT
Sbjct: 215 DIGTSREVFYSVKRNDVSIWNAMITGFA-THGLATEAIRVFSEMEA--EHVSPDSITFLG 271
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFA-LSSLIDMYSKCGSFREAYNVFSGCDGV 192
+L + ++ GK+ M + + K +++D+ + G +EAY +
Sbjct: 272 LLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIE 331
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFND 226
D+V +++++ + +KNPE +
Sbjct: 332 PDVVIWRSLLSS-----------SRTYKNPELGE 354
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 202/351 (57%), Gaps = 20/351 (5%)
Query: 332 SSLIAGYSSKGNMTKAKRLFDSLSER-NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEA 390
+SL+ YSS G++ A+++FD E+ N V+WTA+ S Y +++ +LF+ E
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEA-EK 162
Query: 391 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK--LNMDEKLASALVDMYSKCGNIAY 448
+ D +I+ L ACA + +G++ ++ ++ K L MD L ++L++MY K G
Sbjct: 163 IELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGE--- 219
Query: 449 AEKSFQLVTDSDR-DVILYNVMIAGYAHHGFENKAIQLFQEMLKIS------LKPDAITF 501
EK+ +L +S R DV Y MI GYA +G ++++LF++M I + P+ +TF
Sbjct: 220 TEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTF 279
Query: 502 VALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP 561
+ +L AC H GLVE G++ F SM DYN+ P H+ CMVD++ R L+ A EF+ ++P
Sbjct: 280 IGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMP 339
Query: 562 IQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGR 621
I+ + IW L AC ++ N L ++ + + +++ D+ YV L+N+YA++G W+E +
Sbjct: 340 IKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSK 399
Query: 622 IRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKA---DAIYSTLVCL 669
+R +R + ++PG SWI + + I+ F SG ++ + I L CL
Sbjct: 400 MRDRVRKR---RMPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLRCL 447
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 78/347 (22%)
Query: 209 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 268
G +D A VF + PE + V W +I+ Y +N A+ LF M + IE + +
Sbjct: 114 GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 269 LSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 328
LSAC L +++G+ +++ +K R A +
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKR--------------------KRRLAMDLT-------- 205
Query: 329 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 388
+SL+ Y G KA++LFD ++ +T++ GY + Q + +LF++ +T
Sbjct: 206 -LRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTI 264
Query: 389 E-----ALIPDTMIIVNVLGACAIQATLSLGKQT-HAYILRTKLNMDEKLASALVDMYSK 442
+ + P+ + + VL AC+ + GK+ + I+ L E +VD++ +
Sbjct: 265 DQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCR 324
Query: 443 CGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 502
G++ A H F N ++ +KP+ + +
Sbjct: 325 SGHLKDA--------------------------HEFIN----------QMPIKPNTVIWR 348
Query: 503 ALLSACRHRGLVELGEKFFMSMKE-------DYNVLPEIYHYACMVD 542
LL AC G VELGE+ + E DY L IY M D
Sbjct: 349 TLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWD 395
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 106/213 (49%), Gaps = 7/213 (3%)
Query: 369 YVKS-QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN 427
Y++S + +A+ FR + + + ++ + + A +A+ G+Q HA + + N
Sbjct: 38 YLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFN 97
Query: 428 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
++ ++LV YS G++ YA + F T ++++L+ MI+ Y + +AI+LF+
Sbjct: 98 AVIQIQTSLVGFYSSVGDVDYARQVFD-ETPEKQNIVLWTAMISAYTENENSVEAIELFK 156
Query: 488 EMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGR 546
M ++ D + LSAC G V++GE+ + S+K + ++ +++MY +
Sbjct: 157 RMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVK 216
Query: 547 GNQLEKAV----EFMRKIPIQIDATIWGAFLNA 575
+ EKA E MRK + I+G LN
Sbjct: 217 SGETEKARKLFDESMRKDVTTYTSMIFGYALNG 249
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM----Q 118
N+++ Y+K+ +AR LFD + +D+ +Y SM+ YA +G +L+LF +M Q
Sbjct: 208 NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYA-LNGQAQESLELFKKMKTIDQ 266
Query: 119 SARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFA-LSSLIDMYSKCG 177
S I +++T +L + +V GK+ M+ N + A ++D++ + G
Sbjct: 267 SQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSG 326
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNV 217
++A+ + + V ++ AC G +++ V
Sbjct: 327 HLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEV 366
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 214/421 (50%), Gaps = 8/421 (1%)
Query: 231 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK 290
N + Y+ + ++AL + +++ G + +T S++S C+ GK H +K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 291 NDGCSNQF-VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 349
+ GC V + ++ Y CG + A+ ++ I + + +S+IAG G++ A +
Sbjct: 147 H-GCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 350 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 409
LFD + ++N + W + S Y+ + LFRE + +V +L AC A
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREM-VRAGFQGNESTLVLLLNACGRSA 264
Query: 410 TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVM 469
L G+ HA ++RT LN + +AL+DMY KC + A + F + S R+ + +NVM
Sbjct: 265 RLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSL--SIRNKVTWNVM 322
Query: 470 IAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYN 529
I + HG ++LF+ M+ L+PD +TFV +L C GLV G+ ++ M +++
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQ 382
Query: 530 VLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP---IQIDATIWGAFLNACKINNNTTLVK 586
+ P H CM ++Y E+A E ++ +P + ++T W L++ + N TL +
Sbjct: 383 IKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGE 442
Query: 587 QAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGI 646
+ L++ + N Y L N+Y+ G+W ++ R+R+ ++ ++ ++PGC + ++ +
Sbjct: 443 SIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIV 502
Query: 647 H 647
H
Sbjct: 503 H 503
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/542 (23%), Positives = 221/542 (40%), Gaps = 104/542 (19%)
Query: 32 NQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLV 91
N + HL+ +H L + +D SW A L ++ + F +S+ +
Sbjct: 33 NSITHLFQVHARLITSGNFWDS-------SW---------AIRLLKSSSRFGDSSYTVSI 76
Query: 92 SYNSMLSAYAGADGCDTVALDLFARMQSARDTIGM-----------DEITLTTMLNLSAK 140
Y S+ Y C + S + +G D T ++++ K
Sbjct: 77 -YRSIGKLY-----CANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEK 130
Query: 141 LRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNA 200
V GK H +K D +SL+ MY+ CG+ A +F D+VS N+
Sbjct: 131 TCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKR-DIVSWNS 189
Query: 201 MVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY 260
++A R+G + A +F + P+ N +SWN +I+ Y+ +++LF EM+ G +
Sbjct: 190 IIAGMVRNGDVLAAHKLFDEMPDKN-IISWNIMISAYLGANNPGVSISLFREMVRAGFQG 248
Query: 261 NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVY 320
N+ TL +L+AC LK G+ VHA +++ S+ + + ++D Y KC
Sbjct: 249 NESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKE-------- 300
Query: 321 AGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFK 380
+G+ A+R+FDSLS RN V W + + + E +
Sbjct: 301 --VGL---------------------ARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 381 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMY 440
LF E L PD + V VL CA +S G+ ++ L +DE
Sbjct: 338 LF-EAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYS------LMVDE---------- 380
Query: 441 SKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 500
FQ+ + + N+ Y+ GF +A + + + + P++
Sbjct: 381 ------------FQIKPNFGHQWCMANL----YSSAGFPEEAEEALKNLPDEDVTPESTK 424
Query: 501 FVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY---GRGNQLEKAVEFM 557
+ LLS+ R G LGE S+ E + + YH ++++Y GR + + E +
Sbjct: 425 WANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHL--LMNIYSVTGRWEDVNRVREMV 482
Query: 558 RK 559
++
Sbjct: 483 KE 484
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 4/203 (1%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H QAIK G + N L+H+Y+ G L A KLF ++P R+ SWN+II ++ ++
Sbjct: 141 HGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDV 200
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A LFD ++++S+N M+SAY GA+ V++ LF M R +E TL +L
Sbjct: 201 LAAHKLFDEMPDKNIISWNIMISAYLGANN-PGVSISLFREM--VRAGFQGNESTLVLLL 257
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
N + + G+ +H+ +++T + S ++LIDMY KC A +F + +
Sbjct: 258 NACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLS-IRNK 316
Query: 196 VSKNAMVAACCRDGKMDMALNVF 218
V+ N M+ A C G+ + L +F
Sbjct: 317 VTWNVMILAHCLHGRPEGGLELF 339
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 174/654 (26%), Positives = 296/654 (45%), Gaps = 84/654 (12%)
Query: 2 KSLIVRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFS 61
+SL+ + + H Q +++G + + N+ + LY G + A +LFD +P +N +
Sbjct: 13 RSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTIT 72
Query: 62 WNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSAR 121
WN + K L A LFD RD+VS+N+M+S G + +F MQ R
Sbjct: 73 WNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSC-GFHEYGIRVFFDMQ--R 129
Query: 122 DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL---SSLIDMYSKCGS 178
I E T + + +L +R +G+Q+H + + +S++ L +S++DMY + G
Sbjct: 130 WEIRPTEFTFSILASLVTCVR---HGEQIHGNAICSG--VSRYNLVVWNSVMDMYRRLGV 184
Query: 179 FREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV 238
F D AL+VF E D VSWN LI
Sbjct: 185 F--------------------------------DYALSVF-LTMEDRDVVSWNCLILSCS 211
Query: 239 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 298
+G E AL F M E I+ +++T++ V+S C+ L+ L GK AL +K SN
Sbjct: 212 DSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSI 271
Query: 299 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 358
V +D + KC R +SV +LF L + +
Sbjct: 272 VLGAGIDMFSKCN--RLDDSV-----------------------------KLFRELEKWD 300
Query: 359 YVVWTALCSGYVKSQQC--EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 416
V+ ++ Y S C E +LF T+++ PD +VL + L G
Sbjct: 301 SVLCNSMIGSY--SWHCCGEDALRLFI-LAMTQSVRPDKFTFSSVLSSMN-AVMLDHGAD 356
Query: 417 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 476
H+ +++ ++D +A++L++MY K G++ A F TD +D+I +N +I G A +
Sbjct: 357 VHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFA-KTDG-KDLIFWNTVIMGLARN 414
Query: 477 GFENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 535
+++ +F ++L SLKPD +T + +L AC + G V G + F SM++ + V P
Sbjct: 415 SRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNE 474
Query: 536 HYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKV 595
HYAC++++ R + +A + KIP + + IW L A +T L + + +L+
Sbjct: 475 HYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLES 534
Query: 596 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVF 649
E + Y+ L +Y +W ++R M + G S I +E+ + F
Sbjct: 535 EPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 194/397 (48%), Gaps = 10/397 (2%)
Query: 249 LFIEMIEKGIEYNQHTLASVLSACTGLKC--LKLGKCVHALVLKNDGCSNQFVSSGIVDF 306
F+EM + + + HT V AC K L L K +H L+ S+ F + ++
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 307 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 366
Y + A ++ + + LI G + +A+ LFDS+ R+ V W +L
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 426
SGY + C KLF E L PD + IV+ L ACA GK H Y R +L
Sbjct: 222 SGYAQMNHCREAIKLFDEM-VALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 427 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLF 486
+D LA+ LVD Y+KCG I A + F+L SD+ + +N MI G A HG + F
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELC--SDKTLFTWNAMITGLAMHGNGELTVDYF 338
Query: 487 QEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR 546
++M+ +KPD +TF+++L C H GLV+ F M+ Y+V E+ HY CM D+ GR
Sbjct: 339 RKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGR 398
Query: 547 GNQLEKAVEFMRKIPI----QIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 602
+E+A E + ++P + W L C+I+ N + ++A + + ++G
Sbjct: 399 AGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGV 458
Query: 603 YVQLANVYAAEGKWNEMGRIRKEM-RGKEATKLPGCS 638
Y + +YA +W E+ ++R+ + R K+ K G S
Sbjct: 459 YKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFS 495
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 13/252 (5%)
Query: 8 DALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIM 67
D +V H QA++ GL S +FT N LI +YS+ + A +LFD+ P R+ ++N +I
Sbjct: 132 DLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLID 191
Query: 68 AYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMD 127
+KA + +AR LFDS RDLVS+NS++S YA + C A+ LF M + + D
Sbjct: 192 GLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCRE-AIKLFDEMVAL--GLKPD 248
Query: 128 EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS 187
+ + + L+ A+ GK +H Y + + F + L+D Y+KCG A +F
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 188 GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK------NPEFNDTVSWNTLIAGYVQNG 241
C L + NAM+ G ++ ++ F K P D V++ +++ G +G
Sbjct: 309 LCSDKT-LFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKP---DGVTFISVLVGCSHSG 364
Query: 242 YMERALTLFIEM 253
++ A LF +M
Sbjct: 365 LVDEARNLFDQM 376
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 163/397 (41%), Gaps = 77/397 (19%)
Query: 164 FALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE 223
F L++LI +YS A +F + D+V+ N ++ + ++ A +F P
Sbjct: 153 FTLNTLIRVYSLIAPIDSALQLFDE-NPQRDVVTYNVLIDGLVKAREIVRARELFDSMP- 210
Query: 224 FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKC 283
D VSWN+LI+GY Q + A+ LF EM+ G++ + + S LSAC + GK
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 284 VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 343
+H + + F+++G+VDFY KCG + A ++ K+ F +++I G + GN
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN 330
Query: 344 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 403
E FR+ + + PD + ++VL
Sbjct: 331 -------------------------------GELTVDYFRKM-VSSGIKPDGVTFISVLV 358
Query: 404 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 463
C +H+ ++ N+ +++ S + D +R++
Sbjct: 359 GC-----------SHSGLVDEARNLFDQMRS---------------------LYDVNREM 386
Query: 464 ILYNVMIAGYAHHGFENKAIQLFQEMLKI-SLKPDAITFVALLSACRHRGLVELGEKFFM 522
Y M G +A ++ ++M K + + + LL CR G +E+ EK
Sbjct: 387 KHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAAN 446
Query: 523 SMK----EDYNVLPEIYHYACMVDMYGRGNQLEKAVE 555
+K ED V Y MV+MY + E+ V+
Sbjct: 447 RVKALSPEDGGV------YKVMVEMYANAERWEEVVK 477
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 229/461 (49%), Gaps = 39/461 (8%)
Query: 209 GKMDMALNVFW--KNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLA 266
G + A+ +F P ND WN +I G+ + + A + + M+++ +
Sbjct: 51 GDLSFAVQIFRYIPKPLTND---WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRV 107
Query: 267 SVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 326
L+ LK C+ SS + +C+ N R G+
Sbjct: 108 DALTCSFTLK----------------ACARALCSSAMDQLHCQI-NRR-------GLSAD 143
Query: 327 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 386
S T+ L+ YS G++ A +LFD + R+ W AL +G V + +L++
Sbjct: 144 SLLCTT-LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 387 TTEALIPDTMIIVNVLGACAIQATLSLGKQT-HAYILRTKLNMDEKLASALVDMYSKCGN 445
T E + + +V LGAC+ + G+ H Y N + +++A +DMYSKCG
Sbjct: 203 T-EGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGF 256
Query: 446 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 505
+ A + F+ T + V+ +N MI G+A HG ++A+++F ++ +KPD ++++A L
Sbjct: 257 VDKAYQVFEQFT-GKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAAL 315
Query: 506 SACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQID 565
+ACRH GLVE G F +M V + HY C+VD+ R +L +A + + + + D
Sbjct: 316 TACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPD 374
Query: 566 ATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKE 625
+W + L A +I ++ + + A E+ ++ +N +V L+NVYAA+G+W ++GR+R +
Sbjct: 375 PVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDD 434
Query: 626 MRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
M K+ K+PG S+I + IH F + D SH + IY +
Sbjct: 435 MESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKI 475
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 112/250 (44%), Gaps = 43/250 (17%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H Q + GL++ C L+ YS +G L A+KLFD+MP R+ SWNA+I + +
Sbjct: 132 HCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRA 191
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
++ A++L+ RM++ + I E+T+ L
Sbjct: 192 SE--------------------------------AMELYKRMET--EGIRRSEVTVVAAL 217
Query: 136 NLSAKLRVVCYGKQM-HSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 194
+ L V G+ + H Y +ND + ++ IDMYSKCG +AY VF G
Sbjct: 218 GACSHLGDVKEGENIFHGY----SND-NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKS 272
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWK---NPEFNDTVSWNTLIAGYVQNGYMERALTLFI 251
+V+ N M+ G+ AL +F K N D VS+ + G +E L++F
Sbjct: 273 VVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFN 332
Query: 252 EMIEKGIEYN 261
M KG+E N
Sbjct: 333 NMACKGVERN 342
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 152/588 (25%), Positives = 272/588 (46%), Gaps = 81/588 (13%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQ---- 118
N++I Y K R +FD HRD VSY S++++ DG A+ L M
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINS-CCQDGLLYEAMKLIKEMYFYGF 144
Query: 119 SARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS-LIDMYSKCG 177
+ + + L T + S+K+ + H+ ++ LS+ L+DMY K
Sbjct: 145 IPKSELVASLLALCTRMGSSSKV-----ARMFHALVLVDERMQESVLLSTALVDMYLKFD 199
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
A++VF E + VSW +I+G
Sbjct: 200 DHAAAFHVFD---------------------------------QMEVKNEVSWTAMISGC 226
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLK-CLKLGKCVHALVLKNDGCSN 296
V N E + LF M + + N+ TL SVL AC L L K +H ++ ++
Sbjct: 227 VANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHAD 286
Query: 297 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 356
+ +++ + YC+CGN+ + ++ LF++
Sbjct: 287 ERLTAAFMTMYCRCGNV-------------------------------SLSRVLFETSKV 315
Query: 357 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 416
R+ V+W+++ SGY ++ C V L + R E + +++ ++ ++ AC LS
Sbjct: 316 RDVVMWSSMISGYAETGDCSEVMNLLNQMRK-EGIEANSVTLLAIVSACTNSTLLSFAST 374
Query: 417 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 476
H+ IL+ L +AL+DMY+KCG+++ A + F +T+ +D++ ++ MI Y H
Sbjct: 375 VHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTE--KDLVSWSSMINAYGLH 432
Query: 477 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 536
G ++A+++F+ M+K + D + F+A+LSAC H GLVE + F + Y++ + H
Sbjct: 433 GHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEH 491
Query: 537 YACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLV-KQAEEELLKV 595
YAC +++ GR +++ A E +P++ A IW + L+AC+ + + K EL+K
Sbjct: 492 YACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKS 551
Query: 596 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVE 643
E DN + YV L+ ++ G ++ +R+ M+ ++ K G S I E
Sbjct: 552 EPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPE 599
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 140/309 (45%), Gaps = 43/309 (13%)
Query: 50 LFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTV 109
L D+ + A++ Y+K + A +FD ++ VS+ +M+S + +
Sbjct: 176 LVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYE-M 234
Query: 110 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYG----KQMHSYMVKTANDLSKFA 165
+DLF MQ R+ + + +TL ++L +L YG K++H +
Sbjct: 235 GVDLFRAMQ--RENLRPNRVTLLSVLPACVELN---YGSSLVKEIHGF------------ 277
Query: 166 LSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN 225
SFR GC L + A + CR G + ++ V ++ +
Sbjct: 278 ------------SFRH------GCHADERLTA--AFMTMYCRCGNVSLS-RVLFETSKVR 316
Query: 226 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVH 285
D V W+++I+GY + G + L +M ++GIE N TL +++SACT L VH
Sbjct: 317 DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVH 376
Query: 286 ALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMT 345
+ +LK S+ + + ++D Y KCG++ A V+ + K + SS+I Y G+ +
Sbjct: 377 SQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGS 436
Query: 346 KAKRLFDSL 354
+A +F +
Sbjct: 437 EALEIFKGM 445
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 208/413 (50%), Gaps = 6/413 (1%)
Query: 230 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 289
+NTLI Y+ G + +L LF M+ ++ N T S++ A + G +H L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 290 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 349
K + FV + V FY + G++ + ++ I A +SL+ G M A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 350 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTE--ALIPDTMIIVNVLGACA- 406
F + + V WT + +G+ K +F E E + P+ V+VL +CA
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 407 -IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 465
Q + LGKQ H Y++ ++ + L +AL+DMY K G++ A F + D+ V
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI--RDKKVCA 291
Query: 466 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMK 525
+N +I+ A +G +A+++F+ M + P+ IT +A+L+AC LV+LG + F S+
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSIC 351
Query: 526 EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLV 585
+Y ++P HY C+VD+ GR L A F++ +P + DA++ GA L ACKI+ NT L
Sbjct: 352 SEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELG 411
Query: 586 KQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCS 638
++L+ ++ + +YV L+ A + W+E ++RK M K+P S
Sbjct: 412 NTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H QA+K G F + Y G L+ + K+FD + + + N+++ A + +
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM-QSARDTIGMDEITLTTM 134
A F D+VS+ ++++ ++ G AL +F M Q+ R I +E T ++
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFS-KKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 135 LNLSAKLRV--VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
L+ A + GKQ+H Y++ L+ ++L+DMY K G A +F D +
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIF---DQI 284
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
RD K+ +WN +I+ NG ++AL +F
Sbjct: 285 --------------RDKKV----------------CAWNAIISALASNGRPKQALEMFEM 314
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLG 281
M + N TL ++L+AC K + LG
Sbjct: 315 MKSSYVHPNGITLLAILTACARSKLVDLG 343
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 217/452 (48%), Gaps = 42/452 (9%)
Query: 218 FWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY-NQHTLASVLSACTGLK 276
F +P +D WN LI G+ + ++ + M+ + + T L +C +K
Sbjct: 65 FDSDPSTSD---WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIK 121
Query: 277 CLKLGKC--VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSL 334
+ KC +H V++ SG +D +SL
Sbjct: 122 --SIPKCLEIHGSVIR----------SGFLD---------------------DAIVATSL 148
Query: 335 IAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPD 394
+ YS+ G++ A ++FD + R+ V W + + +++ E + D
Sbjct: 149 VRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRM-GNEGVCGD 207
Query: 395 TMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQ 454
+ +V +L +CA + L++G H + +++AL+DMY+KCG++ A F
Sbjct: 208 SYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFN 267
Query: 455 LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLV 514
+ RDV+ +N MI GY HG +AI F++M+ ++P+AITF+ LL C H+GLV
Sbjct: 268 GMRK--RDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLV 325
Query: 515 ELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLN 574
+ G + F M +++ P + HY CMVD+YGR QLE ++E + D +W L
Sbjct: 326 KEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
Query: 575 ACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKL 634
+CKI+ N L + A ++L+++EA N YV + ++Y+A +RK +R + +
Sbjct: 386 SCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTV 445
Query: 635 PGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
PG SWI + + +H F D H ++ IYS L
Sbjct: 446 PGWSWIEIGDQVHKFVVDDKMHPESAVIYSEL 477
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 172/445 (38%), Gaps = 108/445 (24%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H I+SG L+ YS +G ++ A K+FD+MP R
Sbjct: 130 HGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVR------------------ 171
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
DLVS+N M+ ++ G AL ++ RM + + D TL +L
Sbjct: 172 -------------DLVSWNVMICCFSHV-GLHNQALSMYKRM--GNEGVCGDSYTLVALL 215
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ A + + G +H + F ++LIDMY+KCGS A VF+G
Sbjct: 216 SSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGM------ 269
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
D ++WN++I GY +G+ A++ F +M+
Sbjct: 270 ---------------------------RKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA 302
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-------IVDFYC 308
G+ N T +L C+ +K G V + S+QF + +VD Y
Sbjct: 303 SGVRPNAITFLGLLLGCSHQGLVKEG------VEHFEIMSSQFHLTPNVKHYGCMVDLYG 356
Query: 309 KCGNMRYA-ESVYAGIGIKSPFATSSLIAGYSSKGNM----TKAKRL--FDSLSERNYVV 361
+ G + + E +YA + P +L+ N+ K+L ++ + +YV+
Sbjct: 357 RAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVL 416
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
T++ S +Q ++ KL R + V G I+ +G Q H ++
Sbjct: 417 MTSIYSAANDAQAFASMRKLIRSHD-----------LQTVPGWSWIE----IGDQVHKFV 461
Query: 422 LRTKLNMDEKLASALVDMYSKCGNI 446
+ D+K+ +YS+ G +
Sbjct: 462 V------DDKMHPESAVIYSELGEV 480
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 124/282 (43%), Gaps = 41/282 (14%)
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
D + ++V +G +++A VF + P D VSWN +I + G +AL+++ M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMP-VRDLVSWNVMICCFSHVGLHNQALSMYKRM 199
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
+G+ + +TL ++LS+C + L +G +H + S FVS+ ++D Y KCG++
Sbjct: 200 GNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSL 259
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
A V+ G+ + +S+I GY G+ +A F +
Sbjct: 260 ENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM------------------- 300
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE--K 431
+ P+ + + +L C+ Q + G + H I+ ++ ++ K
Sbjct: 301 -------------VASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVK 346
Query: 432 LASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIA 471
+VD+Y + G + E S +++ S D +L+ ++
Sbjct: 347 HYGCMVDLYGRAGQL---ENSLEMIYASSCHEDPVLWRTLLG 385
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 192/348 (55%), Gaps = 2/348 (0%)
Query: 295 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 354
S+ +V + +V Y GNM A V+ + ++P + +I G ++ G+ KA + +
Sbjct: 156 SHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKM 215
Query: 355 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 414
R V WT + GY + + + LF +A+ P+ + I+ +L A L +
Sbjct: 216 PNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMC 275
Query: 415 KQTHAYI-LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 473
HAY+ R + D ++ ++L+D Y+KCG I A K F + + ++++ + MI+ +
Sbjct: 276 GSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAF 335
Query: 474 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG-EKFFMSMKEDYNVLP 532
A HG +A+ +F++M ++ LKP+ +T +++L+AC H GL E +FF +M +Y + P
Sbjct: 336 AIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITP 395
Query: 533 EIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEEL 592
++ HY C+VDM R +LE+A + +IPI+ A +W L AC + ++ L ++ +L
Sbjct: 396 DVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKL 455
Query: 593 LKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 640
+++E +G YV ++N++ G++ + R RK+M + KLPG S +
Sbjct: 456 MELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 52/331 (15%)
Query: 21 KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARA 80
K G S ++ L+ +Y + G + +AHK+FD+MP RN +WN +I + +A
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 81 LFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAK 140
+ +R +VS+ +++ YA D L LF+RM A D I +EIT+ +L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAIL-LFSRM-VACDAIKPNEITILAILPAVWN 268
Query: 141 LRVVCYGKQMHSYMVKTANDLSKFALS-SLIDMYSKCGSFREAYNVFSGCDGVVDLVSKN 199
L + +H+Y+ K ++ SLID Y+KCG + A+ F
Sbjct: 269 LGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIP--------- 319
Query: 200 AMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 259
+G+ ++ VSW T+I+ + +G + A+++F +M G++
Sbjct: 320 --------NGRKNL--------------VSWTTMISAFAIHGMGKEAVSMFKDMERLGLK 357
Query: 260 YNQHTLASVLSACT--GLKCLKLGKCVHALV--------LKNDGCSNQFVSSGIVDFYCK 309
N+ T+ SVL+AC+ GL + + + +V +K+ GC +VD +
Sbjct: 358 PNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGC--------LVDMLRR 409
Query: 310 CGNMRYAESVYAGIGIKSPFATSSLIAGYSS 340
G + AE + I I+ ++ G S
Sbjct: 410 KGRLEEAEKIALEIPIEEKAVVWRMLLGACS 440
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 254/535 (47%), Gaps = 49/535 (9%)
Query: 55 PHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 114
P F N I AY K + AR LF+ RD S+N++++A A +G +F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACA-QNGVSDEVFRMF 150
Query: 115 ARMQSARDTIGMDEITLTTMLN---LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID 171
RM RD + E + +L L LR++ +Q+H +VK + +S++D
Sbjct: 151 RRMN--RDGVRATETSFAGVLKSCGLILDLRLL---RQLHCAVVKYGYSGNVDLETSIVD 205
Query: 172 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWN 231
+Y KC +A VF D +V NP VSWN
Sbjct: 206 VYGKCRVMSDARRVF---DEIV---------------------------NPS---DVSWN 232
Query: 232 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 291
++ Y++ G+ + A+ +F +M+E + HT++SV+ AC+ L++GK +HA+ +K
Sbjct: 233 VIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKL 292
Query: 292 DGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 351
++ VS+ + D Y KC + A V+ K + +S ++GY+ G +A+ LF
Sbjct: 293 SVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELF 352
Query: 352 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 411
D + ERN V W A+ GYV + + + R I D + +V +L C+ + +
Sbjct: 353 DLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI-DNVTLVWILNVCSGISDV 411
Query: 412 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 471
+GKQ H +I R + + +A+AL+DMY KCG + A F+ +++ RD + +N ++
Sbjct: 412 QMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL-RDEVSWNALLT 470
Query: 472 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNV 530
G A G +A+ F+ M ++ KP T LL+ C + + LG+ +++ Y +
Sbjct: 471 GVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKI 529
Query: 531 LPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLV 585
++ MVDMY + + A+E ++ + D +W + + C N + V
Sbjct: 530 --DVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNGRSKEV 581
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 157/583 (26%), Positives = 267/583 (45%), Gaps = 48/583 (8%)
Query: 14 RDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR-NAFSWNAIIMAYIKA 72
RD V+A ++ A + +C ++ L LL++ H K + N +I+ Y K
Sbjct: 155 RDGVRATETSFAGVLKSCGLILDLR----LLRQLHCAVVKYGYSGNVDLETSIVDVYGKC 210
Query: 73 HNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLT 132
++ AR +FD + VS+N ++ Y G + A+ +F +M + ++ +
Sbjct: 211 RVMSDARRVFDEIVNPSDVSWNVIVRRYLEM-GFNDEAVVMFFKMLEL-NVRPLNHTVSS 268
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
ML S L + GK +H+ VK + +S+ DMY KC A VF
Sbjct: 269 VMLACSRSLALEV-GKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSK 327
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
DL S + ++ G A +F PE N VSWN ++ GYV + AL F+
Sbjct: 328 -DLKSWTSAMSGYAMSGLTREARELFDLMPERN-IVSWNAMLGGYVHAHEWDEALD-FLT 384
Query: 253 MIEKGIE-YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCG 311
++ + IE + TL +L+ C+G+ +++GK H + ++ +N V++ ++D Y KCG
Sbjct: 385 LMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCG 444
Query: 312 NMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE-RNYVVWTALCSGYV 370
++ A F +SE R+ V W AL +G
Sbjct: 445 TLQ-------------------------------SANIWFRQMSELRDEVSWNALLTGVA 473
Query: 371 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 430
+ + E F + P + +L CA L+LGK H +++R +D
Sbjct: 474 RVGRSEQALSFFEGMQVEAK--PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDV 531
Query: 431 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
+ A+VDMYSKC YA + F+ + RD+IL+N +I G +G + +LF +
Sbjct: 532 VIRGAMVDMYSKCRCFDYAIEVFK--EAATRDLILWNSIIRGCCRNGRSKEVFELFMLLE 589
Query: 491 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 550
+KPD +TF+ +L AC G VELG ++F SM Y++ P++ HY CM+++Y + L
Sbjct: 590 NEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCL 649
Query: 551 EKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELL 593
+ EF+ +P + +AC+ + L A + L+
Sbjct: 650 HQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 238/503 (47%), Gaps = 54/503 (10%)
Query: 144 VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVA 203
V GK +HS +K SSLI MY KCG A VF ++ + NAM+
Sbjct: 62 VVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER-NVATWNAMIG 120
Query: 204 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 263
+G +A +F + +TV+W +I GY + +E+A LF M
Sbjct: 121 GYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM---------- 170
Query: 264 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 323
LKN S ++ Y M A + I
Sbjct: 171 ----------------------PFELKNVK-----AWSVMLGVYVNNRKMEDARKFFEDI 203
Query: 324 GIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFR 383
K+ F S +++GY G++ +A+ +F + R+ V+W L +GY ++ + F
Sbjct: 204 PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFF 263
Query: 384 EFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 443
+ E PD + + ++L ACA L +G++ H+ I + +++ +++AL+DMY+KC
Sbjct: 264 NMQG-EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKC 322
Query: 444 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 503
G++ A F+ + S R V N MI+ A HG +A+++F M + LKPD ITF+A
Sbjct: 323 GDLENATSVFESI--SVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIA 380
Query: 504 LLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQ 563
+L+AC H G + G K F MK +V P + H+ C++ + GR +L++A ++++ ++
Sbjct: 381 VLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Query: 564 IDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS--------RYVQLANVYAAEGK 615
+ T+ GA L ACK++ +T + E+++K+ GS ++N+YA +
Sbjct: 440 PNDTVLGALLGACKVHMDTEMA----EQVMKIIETAGSITNSYSENHLASISNLYAHTER 495
Query: 616 WNEMGRIRKEMRGKEATKLPGCS 638
W +R EM + K PG S
Sbjct: 496 WQTAEALRVEMEKRGLEKSPGLS 518
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 208/469 (44%), Gaps = 75/469 (15%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H ++IK G+ S + + LI +Y G + A K+FD+MP RN +WNA+I Y+ +
Sbjct: 69 HSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDA 128
Query: 76 TQARALFDSASH-RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
A LF+ S R+ V++ M+ Y + A +LF RM L +
Sbjct: 129 VLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEK-ARELFERMP----------FELKNV 177
Query: 135 LNLSAKLRVVCYGKQMHS--YMVKTANDLSKFALSSLIDMYSKCGSFREA----YNVFSG 188
S L V ++M + + + F S ++ Y + G EA Y VF+
Sbjct: 178 KAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFAR 237
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 248
DLV N ++A GY QNGY + A+
Sbjct: 238 -----DLVIWNTLIA--------------------------------GYAQNGYSDDAID 260
Query: 249 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 308
F M +G E + T++S+LSAC L +G+ VH+L+ NQFVS+ ++D Y
Sbjct: 261 AFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 320
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTA 364
KCG++ A SV+ I ++S +S+I+ + G +A +F ++ + + + + A
Sbjct: 321 KCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIA 380
Query: 365 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTM---IIVNVLGACA-IQATLSLGKQTH-- 418
+ + V K+F E +T + + P+ ++++LG ++ L K+ H
Sbjct: 381 VLTACVHGGFLMEGLKIFSEMKTQD-VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Query: 419 -------AYILRTKLNMDEKLASALVDMYSKCGNI--AYAEKSFQLVTD 458
A + K++MD ++A ++ + G+I +Y+E +++
Sbjct: 440 PNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISN 488
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 156/339 (46%), Gaps = 21/339 (6%)
Query: 231 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL-KCLKLGKCVHALVL 289
+ LI ++ G +AL L+ + +G+ Y + +L AC + + LGK +H+ +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGV-YFPGWVPLILRACACVVPRVVLGKLLHSESI 73
Query: 290 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 349
K CS+ V S ++ Y KCG + A V+ + ++ +++I GY S G+ A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 350 LFDSLSE-RNYVVWTALCSGYVKSQQCEAVFKLFR----EFRTTEALIPDTMIIVNVLGA 404
LF+ +S RN V W + GY K + E +LF E + +A + VN
Sbjct: 134 LFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKM 193
Query: 405 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 464
+ + +A++ S ++ Y + G++ A F V RD++
Sbjct: 194 EDARKFFEDIPEKNAFVW-----------SLMMSGYFRIGDVHEARAIFYRVF--ARDLV 240
Query: 465 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 524
++N +IAGYA +G+ + AI F M +PDA+T ++LSAC G +++G + S+
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH-SL 299
Query: 525 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQ 563
+ + ++DMY + LE A I ++
Sbjct: 300 INHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 401 VLGACA-IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 459
+L ACA + + LGK H+ ++ + D + S+L+ MY KCG + A K F +
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEM--P 108
Query: 460 DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 519
+R+V +N MI GY +G A LF+E IS+ + +T++ ++ R +E +
Sbjct: 109 ERNVATWNAMIGGYMSNGDAVLASGLFEE---ISVCRNTVTWIEMIKGYGKRIEIEKARE 165
Query: 520 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
F M + L + ++ M+ +Y ++E A +F IP + +A +W ++
Sbjct: 166 LFERMPFE---LKNVKAWSVMLGVYVNNRKMEDARKFFEDIP-EKNAFVWSLMMSG 217
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 16/236 (6%)
Query: 45 QEAHKLFDKMPHR----NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAY 100
+E H L + HR N F NA+I Y K +L A ++F+S S R + NSM+S
Sbjct: 294 REVHSLIN---HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCL 350
Query: 101 AGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAND 160
A G AL++F+ M+S + DEIT +L + G ++ S M
Sbjct: 351 A-IHGKGKEALEMFSTMESL--DLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVK 407
Query: 161 LSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMA---LNV 217
+ LI + + G +EAY + + A++ AC +MA + +
Sbjct: 408 PNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKI 467
Query: 218 FWKNPEFNDTVSWNTLIA---GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLS 270
++ S N L + Y + A L +EM ++G+E + + VL+
Sbjct: 468 IETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVLT 523
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 157/615 (25%), Positives = 274/615 (44%), Gaps = 76/615 (12%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H I SGL +L+ YS LL EA + + + WN +I +YI+
Sbjct: 106 HAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRF 165
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
++ + ++ RM S I DE T +++
Sbjct: 166 QES--------------------------------VSVYKRMMS--KGIRADEFTYPSVI 191
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
A L YG+ +H + +++ + + ++LI MY + G A +F D
Sbjct: 192 KACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSER-DA 250
Query: 196 VSKNAMVAACCRDGKMDMA---LNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
VS NA++ + K+ A L+ + + V+WNT+ G ++ G AL +
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVG 310
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF--VSSGIVDFYCKC 310
M + + + L AC+ + LK GK H LV+++ S+ V + ++ Y +C
Sbjct: 311 MRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRC 370
Query: 311 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 370
++R+A V+ + +SLS W ++ SG+
Sbjct: 371 SDLRHAFIVFQQVEA--------------------------NSLS-----TWNSIISGFA 399
Query: 371 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD- 429
+++ E L +E + P+ + + ++L A L GK+ H YILR + D
Sbjct: 400 YNERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC 458
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 489
L ++LVDMY+K G I A++ F + RD + Y +I GY G A+ F++M
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFD--SMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM 516
Query: 490 LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQ 549
+ +KPD +T VA+LSAC H LV G F M+ + + + HY+CMVD+Y R
Sbjct: 517 DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGY 576
Query: 550 LEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEE-LLKVEADNGSRYVQLAN 608
L+KA + IP + + + L AC I+ NT + + A ++ LL+ + ++ Y+ LA+
Sbjct: 577 LDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLAD 636
Query: 609 VYAAEGKWNEMGRIR 623
+YA G W+++ ++
Sbjct: 637 MYAVTGSWSKLVTVK 651
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 157/615 (25%), Positives = 274/615 (44%), Gaps = 76/615 (12%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H I SGL +L+ YS LL EA + + + WN +I +YI+
Sbjct: 106 HAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRF 165
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
++ + ++ RM S I DE T +++
Sbjct: 166 QES--------------------------------VSVYKRMMS--KGIRADEFTYPSVI 191
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
A L YG+ +H + +++ + + ++LI MY + G A +F D
Sbjct: 192 KACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSER-DA 250
Query: 196 VSKNAMVAACCRDGKMDMA---LNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
VS NA++ + K+ A L+ + + V+WNT+ G ++ G AL +
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVG 310
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF--VSSGIVDFYCKC 310
M + + + L AC+ + LK GK H LV+++ S+ V + ++ Y +C
Sbjct: 311 MRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRC 370
Query: 311 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 370
++R+A V+ + +SLS W ++ SG+
Sbjct: 371 SDLRHAFIVFQQVEA--------------------------NSLS-----TWNSIISGFA 399
Query: 371 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD- 429
+++ E L +E + P+ + + ++L A L GK+ H YILR + D
Sbjct: 400 YNERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC 458
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 489
L ++LVDMY+K G I A++ F + RD + Y +I GY G A+ F++M
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFD--SMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM 516
Query: 490 LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQ 549
+ +KPD +T VA+LSAC H LV G F M+ + + + HY+CMVD+Y R
Sbjct: 517 DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGY 576
Query: 550 LEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEE-LLKVEADNGSRYVQLAN 608
L+KA + IP + + + L AC I+ NT + + A ++ LL+ + ++ Y+ LA+
Sbjct: 577 LDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLAD 636
Query: 609 VYAAEGKWNEMGRIR 623
+YA G W+++ ++
Sbjct: 637 MYAVTGSWSKLVTVK 651
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 240/493 (48%), Gaps = 47/493 (9%)
Query: 79 RALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLS 138
R +FDS + ++ NSM ++ D + V L L+ Q +R I D + ++ +
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDV-LRLYE--QRSRCGIMPDAFSFPVVIKSA 116
Query: 139 AKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS------GCDGV 192
+ +G + + K + + ++DMY K S A VF G D
Sbjct: 117 GR-----FGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWN 171
Query: 193 V------------------------DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTV 228
V D+VS M+ + ++ A F + PE V
Sbjct: 172 VMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPE-KSVV 230
Query: 229 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 288
SWN +++GY QNG+ E AL LF +M+ G+ N+ T V+SAC+ L + + L+
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 289 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKA 347
+ N FV + ++D + KC +++ A ++ +G + T +++I+GY+ G+M+ A
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSA 350
Query: 348 KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAI 407
++LFD++ +RN V W +L +GY + Q + F + PD + +++VL AC
Sbjct: 351 RQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
Query: 408 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 467
A L LG YI + ++ +++ +L+ MY++ GN+ A++ F + +RDV+ YN
Sbjct: 411 MADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM--KERDVVSYN 468
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 527
+ +A +G + + L +M ++PD +T+ ++L+AC GL++ G++ F S++
Sbjct: 469 TLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN- 527
Query: 528 YNVLPEIYHYACM 540
P HYACM
Sbjct: 528 ----PLADHYACM 536
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 185/391 (47%), Gaps = 37/391 (9%)
Query: 32 NQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLV 91
N +I Y G +EA KLFD MP + SW +I + K +L AR FD + +V
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVV 230
Query: 92 SYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMH 151
S+N+MLS YA +G AL LF M R + +E T +++ + + +
Sbjct: 231 SWNAMLSGYA-QNGFTEDALRLFNDM--LRLGVRPNETTWVIVISACSFRADPSLTRSLV 287
Query: 152 SYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKM 211
+ + L+ F ++L+DM++KC + A +F+ +LV+ NAM++ R G M
Sbjct: 288 KLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDM 347
Query: 212 DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG-IEYNQHTLASVLS 270
A +F P+ N VSWN+LIAGY NG A+ F +MI+ G + ++ T+ SVLS
Sbjct: 348 SSARQLFDTMPKRN-VVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLS 406
Query: 271 ACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFA 330
AC + L+LG C IVD Y + ++ +S Y
Sbjct: 407 ACGHMADLELGDC-------------------IVD-YIRKNQIKLNDSGY---------- 436
Query: 331 TSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEA 390
SLI Y+ GN+ +AKR+FD + ER+ V + L + + + L + + E
Sbjct: 437 -RSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMK-DEG 494
Query: 391 LIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
+ PD + +VL AC L G++ I
Sbjct: 495 IEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 103/240 (42%), Gaps = 20/240 (8%)
Query: 350 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 409
+FDS++ N V ++ + K V +L+ E R+ ++PD I++
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLY-EQRSRCGIMPDAFSF-----PVVIKS 115
Query: 410 TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVM 469
G A + + D + + ++DMY K ++ A K F + S R +NVM
Sbjct: 116 AGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQI--SQRKGSDWNVM 173
Query: 470 IAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYN 529
I+GY G + +A +LF M + D +++ +++ +E K+F M E
Sbjct: 174 ISGYWKWGNKEEACKLFDMM----PENDVVSWTVMITGFAKVKDLENARKYFDRMPEK-- 227
Query: 530 VLPEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDATIWGAFLNACKINNNTTLVK 586
+ + M+ Y + E A+ M ++ ++ + T W ++AC + +L +
Sbjct: 228 ---SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTR 284
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/541 (26%), Positives = 240/541 (44%), Gaps = 101/541 (18%)
Query: 14 RDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAH 73
+ H AIK+GL +S+F L+ +Y G + A ++FD++ R+ W A+I AH
Sbjct: 235 KTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGL--AH 292
Query: 74 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
N Q AL LF M S + I + + LTT
Sbjct: 293 NKRQWE------------------------------ALGLFRTMIS-EEKIYPNSVILTT 321
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSK-FALSSLIDMYSKCGSFREAYNVFSGCDGV 192
+L + ++ + GK++H++++K+ N + + F S LID+Y KCG VF G
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSK-- 379
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 252
+NA +SW L++GY NG ++AL +
Sbjct: 380 ----QRNA---------------------------ISWTALMSGYAANGRFDQALRSIVW 408
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
M ++G + T+A+VL C L+ +K GK +H LKN N + + ++ Y KCG
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 372
Y P RLFD L +RN WTA+ YV++
Sbjct: 469 PEY------------PI-------------------RLFDRLEQRNVKAWTAMIDCYVEN 497
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
A ++FR ++ PD++ + VL C+ L LGK+ H +IL+ + +
Sbjct: 498 CDLRAGIEVFRLMLLSKHR-PDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFV 556
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
++ ++ MY KCG++ A SF V + + + + +I Y + AI F++M+
Sbjct: 557 SARIIKMYGKCGDLRSANFSFDAV--AVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSR 614
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
P+ TF A+LS C G V+ +FF M YN+ P HY+ ++++ R ++E+
Sbjct: 615 GFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEE 674
Query: 553 A 553
A
Sbjct: 675 A 675
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 213/461 (46%), Gaps = 74/461 (16%)
Query: 124 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 183
I ++ T + +L + + + +GKQ+H ++ + ++F + L+ MY+ CGS ++A
Sbjct: 107 IPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQ 166
Query: 184 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG-- 241
VF + NV+ SWN L+ G V +G
Sbjct: 167 KVFDE-----------------------STSSNVY----------SWNALLRGTVISGKK 193
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 301
+ L+ F EM E G++ N ++L++V + G L+ G HAL +KN ++ F+ +
Sbjct: 194 RYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKT 253
Query: 302 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 361
+VD Y KCG +G+ A+R+FD + ER+ VV
Sbjct: 254 SLVDMYFKCGK----------VGL---------------------ARRVFDEIVERDIVV 282
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
W A+ +G +++ LFR + E + P+++I+ +L L LGK+ HA++
Sbjct: 283 WGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHV 342
Query: 422 LRTKLNMDEKLA-SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 480
L++K +++ S L+D+Y KCG++A + F R+ I + +++GYA +G +
Sbjct: 343 LKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVF--YGSKQRNAISWTALMSGYAANGRFD 400
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYAC 539
+A++ M + +PD +T +L C ++ G++ ++K + LP +
Sbjct: 401 QALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF--LPNVSLVTS 458
Query: 540 MVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINN 580
++ MY + E + ++ Q + W A ++ C + N
Sbjct: 459 LMVMYSKCGVPEYPIRLFDRLE-QRNVKAWTAMID-CYVEN 497
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 237 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 296
+ + +E ALT+ + ++GI N T +++L AC K L GK VH + N SN
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 297 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 356
+F+ + +V Y CG+++ A+ V FD +
Sbjct: 146 EFLRTKLVHMYTACGSVKDAQKV-------------------------------FDESTS 174
Query: 357 RNYVVWTALCSGYVKS--QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 414
N W AL G V S ++ + V F E R + + + NV + A + L G
Sbjct: 175 SNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDL-NVYSLSNVFKSFAGASALRQG 233
Query: 415 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 474
+THA ++ L L ++LVDMY KCG + A + F + +RD++++ MIAG A
Sbjct: 234 LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIV--ERDIVVWGAMIAGLA 291
Query: 475 HHGFENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 533
H+ + +A+ LF+ M+ + + P+++ +L ++LG++ + + N + +
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 534 IYHYACMVDMY 544
+ ++ ++D+Y
Sbjct: 352 PFVHSGLIDLY 362
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 178/330 (53%), Gaps = 17/330 (5%)
Query: 326 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK-----SQQCEAVFK 380
+S ++L+ Y+ G++ A+++FD + ER V W A+ GY +
Sbjct: 145 ESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMV 204
Query: 381 LFREFRTTEALI-PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN--MDEKLASALV 437
LFR F + + P +V VL A + L +G H YI + +D + +ALV
Sbjct: 205 LFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALV 264
Query: 438 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 497
DMYSKCG + A F+L+ ++V + M G A +G N+ L M + +KP+
Sbjct: 265 DMYSKCGCLNNAFSVFELM--KVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPN 322
Query: 498 AITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFM 557
ITF +LLSA RH GLVE G + F SMK + V P I HY C+VD+ G+ ++++A +F+
Sbjct: 323 EITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFI 382
Query: 558 RKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADN----GSR---YVQLANVY 610
+PI+ DA + + NAC I T + ++ + LL++E ++ GS YV L+NV
Sbjct: 383 LAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVL 442
Query: 611 AAEGKWNEMGRIRKEMRGKEATKLPGCSWI 640
A +GKW E+ ++RKEM+ + PG S++
Sbjct: 443 AHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 31/263 (11%)
Query: 207 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ-----NGYMERALTLF--IEMIEKGIE 259
++G + A VF + PE +V+WN +I GY N +A+ LF G+
Sbjct: 159 KNGDLRYARKVFDEMPE-RTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVR 217
Query: 260 YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS--NQFVSSGIVDFYCKCGNMRYAE 317
T+ VLSA + L++G VH + K + F+ + +VD Y KCG + A
Sbjct: 218 PTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAF 277
Query: 318 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQ 373
SV+ + +K+ F +S+ G + G + L + ++E N + +T+L S Y
Sbjct: 278 SVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIG 337
Query: 374 QCEAVFKLFREFRTTEALIP---DTMIIVNVLGAC-----AIQATLSLGKQTHAYILRTK 425
E +LF+ +T + P IV++LG A Q L++ + A +LR+
Sbjct: 338 LVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSL 397
Query: 426 LN---------MDEKLASALVDM 439
N M E++ AL+++
Sbjct: 398 CNACSIYGETVMGEEIGKALLEI 420
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 79/305 (25%)
Query: 34 LIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSY 93
L+H Y+ +G L+ A K+FD+MP R + +WNA+I Y SH+D ++
Sbjct: 153 LLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY---------------CSHKDKGNH 197
Query: 94 NSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSY 153
N+ A+ LF R + + T+ +L+ ++ ++ G +H Y
Sbjct: 198 NA------------RKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 154 MVKTA--NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKM 211
+ K ++ F ++L+DMYSKCG A++VF ++
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVF-----------------------EL 282
Query: 212 DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 271
NVF +W ++ G NG L M E GI+ N+ T S+LSA
Sbjct: 283 MKVKNVF----------TWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSA 332
Query: 272 C-------TGLKCLKLGKCVHAL--VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAG 322
G++ K K + V+++ GC IVD K G ++ A
Sbjct: 333 YRHIGLVEEGIELFKSMKTRFGVTPVIEHYGC--------IVDLLGKAGRIQEAYQFILA 384
Query: 323 IGIKS 327
+ IK
Sbjct: 385 MPIKP 389
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 221/453 (48%), Gaps = 42/453 (9%)
Query: 223 EFNDTVSWNTLIAGYVQNGYMERALTLFIEMI---EKGIEYNQHTLASVLSACTGLKCLK 279
E ++ ++T+I ++ L F+ M+ E+ I + T ++ AC
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFS 133
Query: 280 LGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 339
+GK +H V+KN F+S D + + G +R Y
Sbjct: 134 VGKQIHCWVVKN----GVFLS----DSHVQTGVLRI----------------------YV 163
Query: 340 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 399
+ A+++FD + + + V W L +GYV+ ++FRE + L PD +
Sbjct: 164 EDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREM-LVKGLEPDEFSVT 222
Query: 400 NVLGACAIQATLSLGKQTHAYILRTK-LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 458
L ACA L+ GK H ++ + + D + +ALVDMY+KCG I A + F+ +T
Sbjct: 223 TALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTR 282
Query: 459 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI-SLKPDAITFVALLSACRHRGLVELG 517
R+V + +I GYA +G+ KA+ + + + +KPD++ + +L+AC H G +E G
Sbjct: 283 --RNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 518 EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACK 577
+M+ Y + P+ HY+C+VD+ R +L+ A+ + K+P++ A++WGA LN C+
Sbjct: 341 RSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCR 400
Query: 578 INNNTTLVKQAEEELLKVEADN----GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATK 633
+ N L + A + LL +E N + VQL+N+Y + + E ++R + + K
Sbjct: 401 THKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRK 460
Query: 634 LPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
PG S + V+ + F SGD SH I++ +
Sbjct: 461 TPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVI 493
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 200/495 (40%), Gaps = 113/495 (22%)
Query: 31 CNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQ----ARALFDSAS 86
CN + + S H L H L HRN ++ + ++ A++ NL + A ++FDS
Sbjct: 21 CNTVKQIKSTHSLFI-IHGL-----HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIE 74
Query: 87 HRDLVSYNSMLSAYAGADGCDTVALDLFARM-QSARDTIGMDEITLTTMLNLSAKLRVVC 145
+ Y++M+ + + + L F M + + I +T ++ K
Sbjct: 75 IPNSFVYDTMIRICSRSSQ-PHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFS 133
Query: 146 YGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAAC 205
GKQ+H ++VK LS D + + G R
Sbjct: 134 VGKQIHCWVVKNGVFLS--------DSHVQTGVLR-----------------------IY 162
Query: 206 CRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTL 265
D + A VF + P+ D V W+ L+ GYV+ G L +F EM+ KG+E ++ ++
Sbjct: 163 VEDKLLLDARKVFDEIPQ-PDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 266 ASVLSACTGLKCLKLGKCVHALVLKNDGC-SNQFVSSGIVDFYCKCGNMRYAESVYAGIG 324
+ L+AC + L GK +H V K S+ FV + +VD Y KCG + A V+ +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 325 IKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE 384
++ F+ ++LI GY++ G KA + L ER
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERL-ERE-------------------------- 314
Query: 385 FRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI-LRTKLNMDEKLASALVDMYSKC 443
+ + PD+++++ VL ACA L G+ + R ++ + S +VD+ +
Sbjct: 315 ----DGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRA 370
Query: 444 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 503
G + + A+ L ++M +KP A + A
Sbjct: 371 GRL---------------------------------DDALNLIEKM---PMKPLASVWGA 394
Query: 504 LLSACRHRGLVELGE 518
LL+ CR VELGE
Sbjct: 395 LLNGCRTHKNVELGE 409
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 123/263 (46%), Gaps = 13/263 (4%)
Query: 309 KCGNMRYAESVYAGIGI----KSPFATSSLIAGYSSKGNMTK----AKRLFDSLSERNYV 360
+C ++ +S ++ I ++ +A S L+ + N+ K A +FDS+ N
Sbjct: 20 RCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSF 79
Query: 361 VWTALCSGYVKSQQCEAVFKLFREF--RTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
V+ + +S Q + F E + P + ++ AC S+GKQ H
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 419 AYILRTKLNM-DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 477
++++ + + D + + ++ +Y + + A K F + DV+ ++V++ GY G
Sbjct: 140 CWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQP--DVVKWDVLMNGYVRCG 197
Query: 478 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 537
++ +++F+EML L+PD + L+AC G + G+ +K+ + +++
Sbjct: 198 LGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVG 257
Query: 538 ACMVDMYGRGNQLEKAVEFMRKI 560
+VDMY + +E AVE +K+
Sbjct: 258 TALVDMYAKCGCIETAVEVFKKL 280
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 153/588 (26%), Positives = 265/588 (45%), Gaps = 82/588 (13%)
Query: 92 SYNSMLSAYA--GADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQ 149
S+++++ A A G+ G A++L D D L +L +S V +Q
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELI------NDGEKPDASPLVHLLRVSGNYGYVSLCRQ 76
Query: 150 MHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDG 209
+H Y+ K + +SL+ Y S +A+ VF D + D
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVF---DEMPD--------------- 118
Query: 210 KMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVL 269
D +SWN+L++GYVQ+G + + LF+E+ + N+ + + L
Sbjct: 119 ---------------PDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAAL 163
Query: 270 SACTGLKCLKLGKCVHALVLK---NDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 326
+AC L LG C+H+ ++K G N V + ++D Y KCG M A V+ + K
Sbjct: 164 AACARLHLSPLGACIHSKLVKLGLEKG--NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEK 221
Query: 327 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 386
+ ++++A S G + F + + V + L +VKS F++ +
Sbjct: 222 DTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMP 281
Query: 387 TTEALIPDTMIIVNVLGACAIQAT------LSLGKQTHAYILRT---------------- 424
+ +T++ V + +AT S G + Y L
Sbjct: 282 NPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSL 341
Query: 425 ------KLNMDEKL--ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 476
KL +D ++ ASAL+DMYSKCG + +AE F T +++I++N MI+GYA +
Sbjct: 342 IHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFW--TMPRKNLIVWNEMISGYARN 399
Query: 477 GFENKAIQLFQEMLKIS-LKPDAITFVALLSACRH-RGLVELGEKFFMSMKEDYNVLPEI 534
G +AI+LF ++ + LKPD TF+ LL+ C H +E+ +F M +Y + P +
Sbjct: 400 GDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSV 459
Query: 535 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLK 594
H ++ G+ ++ +A + +++ D W A L AC + K ++++
Sbjct: 460 EHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIE 519
Query: 595 V-EADNGSR-YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 640
+ +AD Y+ ++N+YA +W E+G+IRK MR K G SWI
Sbjct: 520 LGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 221/507 (43%), Gaps = 90/507 (17%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H K G S+ N L+ Y L++AHK+FD+MP + SWN+++ Y+++
Sbjct: 78 HGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRF 137
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+ LF ++ R + +E + T L
Sbjct: 138 QEGICLF----------------------------------LELHRSDVFPNEFSFTAAL 163
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS-LIDMYSKCGSFREAYNVFSGCDGVVD 194
A+L + G +HS +VK + + + LIDMY KCG +A VF + D
Sbjct: 164 AACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEE-KD 222
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNP------------------EFN----------- 225
VS NA+VA+C R+GK+++ L F + P +FN
Sbjct: 223 TVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPN 282
Query: 226 -DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCV 284
++ SWNT++ GYV + A F +M G+ +++++L+ VL+A L + G +
Sbjct: 283 PNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLI 342
Query: 285 HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNM 344
HA K S V+S ++D Y KCG +++AE ++ + K+ + +I+GY+ G+
Sbjct: 343 HACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDS 402
Query: 345 TKAKRLFDSLSERNYVV--------WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTM 396
+A +LF+ L + ++ A+CS CE ++ + E +I +
Sbjct: 403 IEAIKLFNQLKQERFLKPDRFTFLNLLAVCS------HCEVPMEVMLGY--FEMMINEYR 454
Query: 397 IIVNVLGACA-IQATLSLGK--QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE--- 450
I +V C+ I+A G+ Q I D AL+ S ++ A+
Sbjct: 455 IKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVA 514
Query: 451 -KSFQLVTDSDRDVILYNVMIAGYAHH 476
K +L D+D+D LY VM YA+H
Sbjct: 515 AKMIEL-GDADKDEYLYIVMSNLYAYH 540
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 220/453 (48%), Gaps = 42/453 (9%)
Query: 223 EFNDTVSWNTLIAGYVQNGYMERALTLFIEMI---EKGIEYNQHTLASVLSACTGLKCLK 279
E ++ ++T+I ++ L F+ M+ E+ I + T ++ AC
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFS 133
Query: 280 LGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 339
+GK +H V+KN F+S G + + G +R Y
Sbjct: 134 VGKQIHCWVVKN----GVFLSDG----HVQTGVLRI----------------------YV 163
Query: 340 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 399
+ A+++FD + + + V W L +GYV+ ++F+E + PD +
Sbjct: 164 EDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEM-LVRGIEPDEFSVT 222
Query: 400 NVLGACAIQATLSLGKQTHAYILRTK-LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 458
L ACA L+ GK H ++ + + + D + +ALVDMY+KCG I A + F+ +T
Sbjct: 223 TALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTR 282
Query: 459 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI-SLKPDAITFVALLSACRHRGLVELG 517
R+V + +I GYA +G+ KA + + +KPD++ + +L+AC H G +E G
Sbjct: 283 --RNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 518 EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACK 577
+M+ Y + P+ HY+C+VD+ R +L+ A++ + K+P++ A++WGA LN C+
Sbjct: 341 RTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCR 400
Query: 578 INNNTTLVKQAEEELLKVEADN----GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATK 633
+ N L + A + LL +E N + VQL+N+Y + + E ++R + + K
Sbjct: 401 THKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRK 460
Query: 634 LPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
PG S + V+ + F SGD SH I++ +
Sbjct: 461 TPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLI 493
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 199/495 (40%), Gaps = 113/495 (22%)
Query: 31 CNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQ----ARALFDSAS 86
CN + + S H L H L HRN ++ + ++ A++ NL + A ++FDS
Sbjct: 21 CNTVKQIKSTHSLFI-IHGL-----HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIE 74
Query: 87 HRDLVSYNSMLSAYAGADGCDTVALDLFARM-QSARDTIGMDEITLTTMLNLSAKLRVVC 145
+ Y++M+ + + + L F M + + I +T ++ K
Sbjct: 75 IPNSFVYDTMIRICSRSSQ-PHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFS 133
Query: 146 YGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAAC 205
GKQ+H ++VK LS D + + G R
Sbjct: 134 VGKQIHCWVVKNGVFLS--------DGHVQTGVLR-----------------------IY 162
Query: 206 CRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTL 265
D + A VF + P+ D V W+ L+ GYV+ G L +F EM+ +GIE ++ ++
Sbjct: 163 VEDKLLFDARKVFDEIPQ-PDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSV 221
Query: 266 ASVLSACTGLKCLKLGKCVHALVLKNDGC-SNQFVSSGIVDFYCKCGNMRYAESVYAGIG 324
+ L+AC + L GK +H V K S+ FV + +VD Y KCG + A V+ +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT 281
Query: 325 IKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE 384
++ F+ ++LI GY++ G KA D + ER
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKATTCLDRI-ERE-------------------------- 314
Query: 385 FRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI-LRTKLNMDEKLASALVDMYSKC 443
+ + PD+++++ VL ACA L G+ + R + + S +VD+ +
Sbjct: 315 ----DGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRA 370
Query: 444 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 503
G + + A+ L ++M +KP A + A
Sbjct: 371 GRL---------------------------------DDALDLIEKM---PMKPLASVWGA 394
Query: 504 LLSACRHRGLVELGE 518
LL+ CR VELGE
Sbjct: 395 LLNGCRTHKNVELGE 409
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 149/332 (44%), Gaps = 21/332 (6%)
Query: 309 KCGNMRYAESVYAGIGI----KSPFATSSLIAGYSSKGNMTK----AKRLFDSLSERNYV 360
+C ++ +S ++ I ++ +A S L+ + N+ K A +FDS+ N
Sbjct: 20 RCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSF 79
Query: 361 VWTALCSGYVKSQQCEAVFKLFREF--RTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
V+ + +S Q + F E + P + ++ AC S+GKQ H
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 419 AYILRTKLNM-DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 477
++++ + + D + + ++ +Y + + A K F + DV+ ++V++ GY G
Sbjct: 140 CWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQP--DVVKWDVLMNGYVRCG 197
Query: 478 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 537
++ +++F+EML ++PD + L+AC G + G+ +K+ + +++
Sbjct: 198 LGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVG 257
Query: 538 ACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEA 597
+VDMY + +E AVE K+ + + W A + K+A L ++E
Sbjct: 258 TALVDMYAKCGCIETAVEVFEKL-TRRNVFSWAALIGGYAAYG---YAKKATTCLDRIER 313
Query: 598 DNGSRY--VQLANVYA--AEGKWNEMGRIRKE 625
++G + V L V A A G + E GR E
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 196/376 (52%), Gaps = 7/376 (1%)
Query: 227 TVSWNTLIAGYVQNGYMERALTLFI-EMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVH 285
T +WN +I N AL LFI MI ++++ T V+ AC ++LG VH
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 286 ALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMT 345
L +K ++ F + ++D Y KCG V+ + +S + ++++ G S +
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 346 KAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGAC 405
A+ +F+ + RN V WTA+ + YVK+++ + F+LFR + + + P+ IVN+L A
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD-VKPNEFTIVNLLQAS 261
Query: 406 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 465
+LS+G+ H Y + +D L +AL+DMYSKCG++ A K F ++ + +
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM--QGKSLAT 319
Query: 466 YNVMIAGYAHHGFENKAIQLFQEMLKI-SLKPDAITFVALLSACRHRGLVELGEKFFMSM 524
+N MI HG +A+ LF+EM + S++PDAITFV +LSAC + G V+ G ++F M
Sbjct: 320 WNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRM 379
Query: 525 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTL 584
+ Y + P H ACM+ + + ++EKA + + D +F N N T
Sbjct: 380 IQVYGISPIREHNACMIQLLEQALEVEKASNLVES--MDSDPDFNSSFGNEYTDGMNETN 437
Query: 585 VKQAEEELLKVEADNG 600
++ +++ + D G
Sbjct: 438 ETPSQHQIMFTKWDTG 453
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 121/267 (45%), Gaps = 37/267 (13%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H AIK+G + +F N L+ LY G K+FDKMP R+ SW ++ + L
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A +F+ R++VS+ +M++AY D A LF RMQ D + +E T+ +L
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDE-AFQLFRRMQV--DDVKPNEFTIVNLL 258
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
S +L + G+ +H Y K L F ++LIDMYSKCGS ++A VF G
Sbjct: 259 QASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQG---- 314
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+WN++I +G E AL+LF EM E
Sbjct: 315 -----------------------------KSLATWNSMITSLGVHGCGEEALSLFEEMEE 345
Query: 256 KG-IEYNQHTLASVLSACTGLKCLKLG 281
+ +E + T VLSAC +K G
Sbjct: 346 EASVEPDAITFVGVLSACANTGNVKDG 372
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 157/393 (39%), Gaps = 70/393 (17%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNL 75
H + IK L + QLI + S G Q A +F+++ + F+WN +I + H
Sbjct: 40 HTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKP 99
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+A LF ++S+ S D+ T ++
Sbjct: 100 REALLLFILM----MISHQSQF-----------------------------DKFTFPFVI 126
Query: 136 NLSAKLRVVCYGKQMHSYMVKTA--NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 193
+ G Q+H +K ND+ F ++L+D+Y KCG VF G
Sbjct: 127 KACLASSSIRLGTQVHGLAIKAGFFNDV--FFQNTLMDLYFKCGKPDSGRKVFDKMPGR- 183
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 253
+VS M+ + ++D A VF + P N VSW +I YV+N + A LF M
Sbjct: 184 SIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRN-VVSWTAMITAYVKNRRPDEAFQLFRRM 242
Query: 254 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 313
++ N+ T+ ++L A T L L +G+ VH KN + F+ + ++D Y KCG++
Sbjct: 243 QVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSL 302
Query: 314 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 373
+ A+++FD + ++ W ++ +
Sbjct: 303 Q-------------------------------DARKVFDVMQGKSLATWNSMITSLGVHG 331
Query: 374 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 406
E LF E ++ PD + V VL ACA
Sbjct: 332 CGEEALSLFEEMEEEASVEPDAITFVGVLSACA 364
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 155/644 (24%), Positives = 275/644 (42%), Gaps = 106/644 (16%)
Query: 4 LIVRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWN 63
L R+ + V H + I G ++F + L+ LY+ L+ A KLFD+M RN N
Sbjct: 126 LFCREGIQV---HCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCN 182
Query: 64 AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT 123
++ + + +++ LF+ ++ RM+ +
Sbjct: 183 LLLRCFCQT---GESKRLFE-----------------------------VYLRME--LEG 208
Query: 124 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK-FALSSLIDMYSKCGSFREA 182
+ + +T M+ + R+V GKQ+HS +VK+ ++S F + L+D YS CG +
Sbjct: 209 VAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGS 268
Query: 183 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 242
F NA+ PE D +SWN++++ G
Sbjct: 269 MRSF------------NAV--------------------PE-KDVISWNSIVSVCADYGS 295
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
+ +L LF +M G + S L+ C+ ++ GK +H VLK
Sbjct: 296 VLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLK------------ 343
Query: 303 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 362
G + S S+LI Y + + L+ SL N
Sbjct: 344 ------------------MGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECC 385
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT--HAY 420
+L + + + + ++F E D + + VL A ++ SL T H
Sbjct: 386 NSLMTSLMHCGITKDIIEMF-GLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCC 444
Query: 421 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 480
+++ D ++ +L+D Y+K G + K F + ++ +I GYA +G
Sbjct: 445 AIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTP--NIFCLTSIINGYARNGMGT 502
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 540
+++ +EM +++L PD +T +++LS C H GLVE GE F S++ Y + P YACM
Sbjct: 503 DCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACM 562
Query: 541 VDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 600
VD+ GR +EKA + + D W + L +C+I+ N T+ ++A E L+ +E +N
Sbjct: 563 VDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENF 622
Query: 601 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVEN 644
+ Y+Q++ Y G + +IR+ +E + G S + V+N
Sbjct: 623 AVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 103/241 (42%), Gaps = 16/241 (6%)
Query: 342 GNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE-----FRTTEALIPDTM 396
GN+ A FD +S R+ V + L SG + +L+ E R + + P
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP--- 116
Query: 397 IIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLV 456
+VL C+ + G Q H ++ + + SALV +Y+ + A K F +
Sbjct: 117 ---SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM 173
Query: 457 TDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVEL 516
DR++ + N+++ + G + +++ M + + +T+ ++ C H LV
Sbjct: 174 L--DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYE 231
Query: 517 GEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNA 575
G++ + +K +N+ I+ +VD Y L ++ +P + D W + ++
Sbjct: 232 GKQLHSLVVKSGWNI-SNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSV 289
Query: 576 C 576
C
Sbjct: 290 C 290
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 437 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 496
+D K GN+ A ++F + S RDV+ YN++I+G + +G +AI+L+ EM+ L+
Sbjct: 53 IDELIKSGNLLSAHEAFDEM--SVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRE 110
Query: 497 DAITFVALLSAC 508
A TF ++LS C
Sbjct: 111 SASTFPSVLSVC 122
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 224/501 (44%), Gaps = 75/501 (14%)
Query: 63 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM--QSA 120
N +I + ++ +L AR +FDS ++ V++ +M+ Y G + A LF
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY-GLEDEAFALFEDYVKHGI 179
Query: 121 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 180
R T +E +LNL ++ G+Q+H MVK + SSL+ Y++CG
Sbjct: 180 RFT---NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELT 235
Query: 181 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 240
A F DM E D +SW +I+ +
Sbjct: 236 SALRAF-------------------------DMM--------EEKDVISWTAVISACSRK 262
Query: 241 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 300
G+ +A+ +FI M+ N+ T+ S+L AC+ K L+ G+ VH+LV+K ++ FV
Sbjct: 263 GHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVG 322
Query: 301 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 360
+ ++D Y KCG + V+ G+ ++ +S+IA ++ +G +A LF + R+
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH-- 380
Query: 361 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 420
LI + + +V++L AC L LGK+ HA
Sbjct: 381 ------------------------------LIANNLTVVSILRACGSVGALLLGKELHAQ 410
Query: 421 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 480
I++ + + + S LV +Y KCG A Q + RDV+ + MI+G + G E+
Sbjct: 411 IIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP--SRDVVSWTAMISGCSSLGHES 468
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 540
+A+ +EM++ ++P+ T+ + L AC + + +G K+++ L ++ + +
Sbjct: 469 EALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNH-ALSNVFVGSAL 527
Query: 541 VDMYGRGNQLEKAVEFMRKIP 561
+ MY + + +A +P
Sbjct: 528 IHMYAKCGFVSEAFRVFDSMP 548
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 226/521 (43%), Gaps = 92/521 (17%)
Query: 8 DALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHG---LLQEAHKLFDKMPHRNAFSWNA 64
+A ++ D+V+ +F C L++L S L ++ H K+ N ++
Sbjct: 166 EAFALFEDYVKHGIRFTNERMFVC--LLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESS 223
Query: 65 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 124
++ Y + LT A FD +D++S+ +++SA G A+ +F I
Sbjct: 224 LVYFYAQCGELTSALRAFDMMEEKDVISWTAVISA-CSRKGHGIKAIGMF---------I 273
Query: 125 GM-------DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
GM +E T+ ++L ++ + + +G+Q+HS +VK F +SL+DMY+KCG
Sbjct: 274 GMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCG 333
Query: 178 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 237
+ VF G +TV+W ++IA +
Sbjct: 334 EISDCRKVFDGMSN---------------------------------RNTVTWTSIIAAH 360
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 297
+ G+ E A++LF M + + N T+ S+L AC + L LGK +HA ++KN N
Sbjct: 361 AREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNV 420
Query: 298 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 357
++ S +V YCKCG R A +V L R
Sbjct: 421 YIGSTLVWLYCKCGESRDAFNV-------------------------------LQQLPSR 449
Query: 358 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 417
+ V WTA+ SG +E E + P+ + L ACA +L +G+
Sbjct: 450 DVVSWTAMISGCSSLGHESEALDFLKEM-IQEGVEPNPFTYSSALKACANSESLLIGRSI 508
Query: 418 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 477
H+ + + + SAL+ MY+KCG ++ A + F + +++++ + MI GYA +G
Sbjct: 509 HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFD--SMPEKNLVSWKAMIMGYARNG 566
Query: 478 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 518
F +A++L M + D F +LS C G +EL E
Sbjct: 567 FCREALKLMYRMEAEGFEVDDYIFATILSTC---GDIELDE 604
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 185/379 (48%), Gaps = 39/379 (10%)
Query: 199 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 258
N ++++C R G + A VF PE N TV+W +I GY++ G + A LF + ++ GI
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKN-TVTWTAMIDGYLKYGLEDEAFALFEDYVKHGI 179
Query: 259 EY-NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 317
+ N+ +L+ C+ +LG+ VH ++K G N V S +V FY +C
Sbjct: 180 RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKV-GVGNLIVESSLVYFYAQC------- 231
Query: 318 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 377
G +T A R FD + E++ + WTA+ S +
Sbjct: 232 ------------------------GELTSALRAFDMMEEKDVISWTAVISACSRKGHGIK 267
Query: 378 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 437
+F +P+ + ++L AC+ + L G+Q H+ +++ + D + ++L+
Sbjct: 268 AIGMFIGM-LNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLM 326
Query: 438 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 497
DMY+KCG I+ K F + S+R+ + + +IA +A GF +AI LF+ M + L +
Sbjct: 327 DMYAKCGEISDCRKVFDGM--SNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIAN 384
Query: 498 AITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFM 557
+T V++L AC G + LG++ + ++ ++ +Y + +V +Y + + A +
Sbjct: 385 NLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 558 RKIPIQIDATIWGAFLNAC 576
+++P + D W A ++ C
Sbjct: 444 QQLPSR-DVVSWTAMISGC 461
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 1 MKSLIVRDALVVYRD-HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNA 59
+K+ ++L++ R H A K+ S++F + LIH+Y+ G + EA ++FD MP +N
Sbjct: 493 LKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNL 552
Query: 60 FSWNAIIMAYIK 71
SW A+IM Y +
Sbjct: 553 VSWKAMIMGYAR 564
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 110/206 (53%), Gaps = 2/206 (0%)
Query: 392 IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 451
+PD V + +CA +L K+ H + L++K D KL + ++ M+ +C +I A++
Sbjct: 233 MPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKR 292
Query: 452 SFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 511
F + D D D +++M+ Y+ +G + A+ LF+EM K LKP+ TF+ + AC
Sbjct: 293 VFDHMVDKDMDS--WHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 512 GLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGA 571
G +E F SMK ++ + P+ HY ++ + G+ L +A +++R +P + A W A
Sbjct: 351 GGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEA 410
Query: 572 FLNACKINNNTTLVKQAEEELLKVEA 597
N +++ + L EE ++ V+
Sbjct: 411 MRNYARLHGDIDLEDYMEELMVDVDP 436
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 201/457 (43%), Gaps = 61/457 (13%)
Query: 90 LVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQ 149
+V + +L+ A + D V + L+ +M++ I D + T +++ + +
Sbjct: 79 IVDFTRVLTVIAKMNKFDIV-IYLYHKMENL--GISHDLYSFTILIHCFCRCSRLSLALA 135
Query: 150 MHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG---VVDLVSKNAMVAACC 206
+ M+K S L SL++ + + F+EA ++ DG V ++V N ++ C
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 207 RDGKMDMALNVFW---KNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 263
++ ++ AL VF+ K D V++NTLI+G +G A L +M+++ I+
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID---- 251
Query: 264 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 323
N + ++D + K GN+ A ++Y +
Sbjct: 252 -------------------------------PNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 324 GIKS--P--FATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQC 375
+S P F +SLI G+ G + AK +FD + + + V + L +G+ KS++
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
E KLF E T + L+ D ++ L++ ++ ++ ++ D +
Sbjct: 341 EDGMKLFCEM-TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399
Query: 436 LVDMYSKCGNIAYAEKSFQLVTD-----SDRDVILYNVMIAGYAHHGFENKAIQLFQEML 490
L+D G I EK+ +V D D D+I YN++I G +A LF+ +
Sbjct: 400 LLDCLCNNGKI---EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 491 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 527
+ +KPDAI ++ ++S +GL +K MKED
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 17/265 (6%)
Query: 21 KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAHNLT 76
K G+ + T N LI S G +A +L M R N + A+I ++K NL
Sbjct: 212 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 271
Query: 77 QARALFDSASHRDLV----SYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLT 132
+AR L+ R +V +YNS+++ + GC A +F M S D +T
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFC-IHGCLGDAKYMFDLMVSK--GCFPDVVTYN 328
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS---GC 189
T++ K + V G ++ M F ++LI Y + G A VF+ C
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 388
Query: 190 DGVVDLVSKNAMVAACCRDGKMDMALNV---FWKNPEFNDTVSWNTLIAGYVQNGYMERA 246
D+V+ N ++ C +GK++ AL + K+ D +++N +I G + ++ A
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSA 271
LF + KG++ + +++S
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISG 473
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 158/369 (42%), Gaps = 37/369 (10%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPH----RNAFSWNAIIMAYIKAH 73
+ +K G SI T L++ + QEA L D M N +N +I K
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 74 NLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 129
+L A +F + D V+YN+++S + + G T A L M + I + I
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS-GRWTDAARLLRDM--VKRKIDPNVI 255
Query: 130 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS-- 187
T +++ K + + ++ M++ + + F +SLI+ + G +A +F
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 188 ---GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK---NPEFNDTVSWNTLIAGYVQNG 241
GC D+V+ N ++ C+ +++ + +F + D ++NTLI GY Q G
Sbjct: 316 VSKGC--FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 373
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL-KLGKCVHALVLKNDGCSNQ--- 297
+ A +F M++ G+ +++ L CL GK ALV+ D ++
Sbjct: 374 KLNVAQKVFNRMVDCGVS------PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 298 --FVSSGIVDFYCKCGNMRYAESVYAGI---GIKS-PFATSSLIAGYSSKGNMTKAKRLF 351
+ I+ C+ ++ A ++ + G+K A ++I+G KG +A +L
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 352 DSLSERNYV 360
+ E ++
Sbjct: 488 RRMKEDGFM 496
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 175/423 (41%), Gaps = 64/423 (15%)
Query: 176 CGSFREAYNVFSGCD-----GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEF---NDT 227
C F +A+++F C+ + +V ++ + K D+ + ++ K +D
Sbjct: 57 CIKFDDAFSLF--CEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL 114
Query: 228 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHA 286
S+ LI + + + AL L +M++ G + TL S+L+ C G + + +
Sbjct: 115 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQE----AVS 170
Query: 287 LVLKNDG---CSNQFVSSGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYS 339
LV DG N + + +++ CK ++ A V+ + GI++ T ++LI+G S
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 340 SKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 395
+ G T A RL + +R N + +TAL +VK L++E +++P+
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM-IRRSVVPNV 289
Query: 396 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 455
+++ I L K Y+ ++ ++ F
Sbjct: 290 FTYNSLINGFCIHGCLGDAK----YMF----------------------DLMVSKGCFP- 322
Query: 456 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 515
DV+ YN +I G+ ++LF EM L DA T+ L+ G +
Sbjct: 323 ------DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 516 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA---VEFMRKIPIQIDATIWGAF 572
+ +K F M D V P+I Y ++D ++EKA VE ++K + +D +
Sbjct: 377 VAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 573 LNA 575
+
Sbjct: 436 IQG 438
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 202/475 (42%), Gaps = 37/475 (7%)
Query: 127 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN-- 184
D +TL+++LN + + + MV+ F ++LI EA
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 185 ---VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYV 238
V GC DLV+ +V C+ G +D+AL++ K + D V +NT+I G
Sbjct: 212 DQMVQRGCQP--DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 239 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL-KLGKCVHALVLKNDGC--- 294
+ +M+ AL LF EM KGI + T +S++S CL G+ A L +D
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS------CLCNYGRWSDASRLLSDMIERK 323
Query: 295 --SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS--P--FATSSLIAGYSSKGNMTKAK 348
N S ++D + K G + AE +Y + +S P F SSLI G+ + +AK
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 349 RLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 404
+F+ + + N V ++ L G+ K+++ E +LFRE + L+ +T+ ++
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYTTLIHG 442
Query: 405 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRD 462
+ ++ ++ + + L+D K G +A A F+ + S + D
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 463 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFM 522
+ YN+MI G G +LF + + P+ I + ++S +G E +
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 523 SMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDATIWGAFLN 574
MKED LP Y ++ R E + E MR DA+ G N
Sbjct: 563 KMKED-GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 201/469 (42%), Gaps = 54/469 (11%)
Query: 195 LVSKNAMVAACCRDGKMDMALNVFW-----KNPEFNDTVSWNTLIAGYVQNGYMERALTL 249
+++ N M+ +C + G ++ ++ W +N EF++ V++N LI G+ +NG ME A
Sbjct: 238 VITFNTMLDSCFKAGDLE-RVDKIWLEMKRRNIEFSE-VTYNILINGFSKNGKMEEARRF 295
Query: 250 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV----- 304
+M G ++ ++ G C L G +++ +++GI
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIE----------GYCKQGLFDDAWGVTDEMLNAGIYPTTST 345
Query: 305 -DFY----CKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS---- 355
+ Y C G + A + + + + ++L+ GY G +A LFD L
Sbjct: 346 YNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDI 405
Query: 356 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 415
+ V + L G +S E +L +E TT+ + PD + ++ LS+
Sbjct: 406 HPSIVTYNTLIDGLCESGNLEGAQRL-KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMAT 464
Query: 416 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL-----VTDSD-RDVILYNVM 469
+ + +LR + D + + G+ ++K+F+L TD D+ +YNV
Sbjct: 465 EVYDEMLRKGIKPDGYAYTTRAVGELRLGD---SDKAFRLHEEMVATDHHAPDLTIYNVR 521
Query: 470 IAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYN 529
I G G KAI+ +++ ++ L PD +T+ ++ G ++ + M
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-R 580
Query: 530 VLPEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDATIWGAFL-NACKINNNTTLV 585
+ P + Y ++ + + +LE+A ++ M+K ++ + A L CK N +
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN----I 636
Query: 586 KQAEEELLKVEAD----NGSRYVQLANVYAAEGKWNEMGRIRKEMRGKE 630
+A L K+E + N Y L + KW E+ ++ KEM KE
Sbjct: 637 DEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKE 685
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/524 (21%), Positives = 213/524 (40%), Gaps = 64/524 (12%)
Query: 90 LVSYNSML-SAYAGAD--GCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCY 146
++++N+ML S + D D + L++ R I E+T ++N +K +
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEM------KRRNIEFSEVTYNILINGFSKNGKMEE 291
Query: 147 GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC--DGVVDLVSK-NAMVA 203
++ H M ++ ++ ++ + LI+ Y K G F +A+ V G+ S N +
Sbjct: 292 ARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYIC 351
Query: 204 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 263
A C G++D A + + D VS+NTL+ GY++ G A LF +
Sbjct: 352 ALCDFGRIDDARELL-SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDD----------- 399
Query: 264 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM----RYAESV 319
L+ G ++V N ++D C+ GN+ R E +
Sbjct: 400 --------------LRAGDIHPSIVTYN----------TLIDGLCESGNLEGAQRLKEEM 435
Query: 320 YAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQC 375
+ ++L+ G+ GN++ A ++D + + + +T G ++
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 495
Query: 376 EAVFKLFREFRTTEALIPD-TMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 434
+ F+L E T+ PD T+ V + G C + L + I R L D +
Sbjct: 496 DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV-GNLVKAIEFQRKIFRVGLVPDHVTYT 554
Query: 435 ALVDMYSKCGNIAYAEKSFQ--LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
++ Y + G A + L VI Y V+I G+A G +A Q EM K
Sbjct: 555 TVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 614
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
++P+ +T ALL G ++ ++ M+E+ + P Y Y ++ + E+
Sbjct: 615 GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE-GIPPNKYSYTMLISKNCDFEKWEE 673
Query: 553 AVEFMRKI---PIQIDATIWGAFLNACKINNNTTLVKQAEEELL 593
V+ +++ I+ D A + ++ + V+ E LL
Sbjct: 674 VVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLLL 717
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 108/512 (21%), Positives = 202/512 (39%), Gaps = 107/512 (20%)
Query: 21 KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAF-----SWNAIIMAYIKAHNL 75
+ + S T N LI+ +S +G ++EA + M R+ F S+N +I Y K
Sbjct: 266 RRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM-RRSGFAVTPYSFNPLIEGYCKQGLF 324
Query: 76 TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
A + D + + S + Y A CD F R+ AR+ +L
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICA-LCD------FGRIDDARE-----------LL 366
Query: 136 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 195
+ A VV Y MH Y+ + KF +SL+ ++ D +
Sbjct: 367 SSMAAPDVVSYNTLMHGYI-----KMGKFVEASLL------------FDDLRAGDIHPSI 409
Query: 196 VSKNAMVAACCRDGKMDMALNVFWKNPE---FNDTVSWNTLIAGYVQNGYMERALTLFIE 252
V+ N ++ C G ++ A + + F D +++ TL+ G+V+NG + A ++ E
Sbjct: 410 VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDE 469
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI------VDF 306
M+ KGI+ + + + + L+LG A L + + + + +D
Sbjct: 470 MLRKGIKPDGYAYTT-----RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDG 524
Query: 307 YCKCGNM----RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS-LSERNY-- 359
CK GN+ + ++ + +++I GY G A+ L+D L +R Y
Sbjct: 525 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS 584
Query: 360 -VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
+ + L G+ K+ + E F+ E + + P+ M TH
Sbjct: 585 VITYFVLIYGHAKAGRLEQAFQYSTEMK-KRGVRPNVM--------------------TH 623
Query: 419 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL-----YNVMIAGY 473
+AL+ K GNI +++++ + + + I Y ++I+
Sbjct: 624 ---------------NALLYGMCKAGNI---DEAYRYLCKMEEEGIPPNKYSYTMLISKN 665
Query: 474 AHHGFENKAIQLFQEMLKISLKPDAITFVALL 505
+ ++L++EML ++PD T AL
Sbjct: 666 CDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQ 77
+ + +G+ + T N I G + +A +L M + S+N ++ YIK +
Sbjct: 333 EMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVE 392
Query: 78 ARALFDSAS----HRDLVSYNSMLSAYAGADG-CDTVALDLFARMQSARDT--IGMDEIT 130
A LFD H +V+YN+++ DG C++ L+ R++ T I D IT
Sbjct: 393 ASLLFDDLRAGDIHPSIVTYNTLI------DGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446
Query: 131 LTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG----SFREAYNVF 186
TT++ K + +++ M++ +A ++ + G +FR +
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMV 506
Query: 187 SGCDGVVDLVSKNAMVAACCRDGKMDMALNV---FWKNPEFNDTVSWNTLIAGYVQNGYM 243
+ DL N + C+ G + A+ ++ D V++ T+I GY++NG
Sbjct: 507 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 244 ERALTLFIEMIEK 256
+ A L+ EM+ K
Sbjct: 567 KMARNLYDEMLRK 579
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 199/469 (42%), Gaps = 56/469 (11%)
Query: 127 DEITLTTMLNLSAKLRVVCYGKQMHS------YMVKTANDLSKFALSSLIDMYSKCGSFR 180
D +TL ++LN C+G ++ MV+ F ++LI +
Sbjct: 150 DIVTLNSLLN------GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 181 EAYN-----VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNT 232
EA V GC DLV+ +V C+ G +D+AL++ K + V +NT
Sbjct: 204 EAVALVDRMVVKGCQP--DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 233 LIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL-KLGKCVHALVLKN 291
+I + AL LF EM KGI N T S++ +CL G+ A L +
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI------RCLCNYGRWSDASRLLS 315
Query: 292 DGC-----SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS--P--FATSSLIAGYSSKG 342
D N S ++D + K G + AE +Y + +S P F SSLI G+
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 343 NMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 398
+ +AK +F+ + + N V + L G+ K+++ + +LFRE + L+ +T+
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM-SQRGLVGNTVTY 434
Query: 399 VNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA-----SALVDMYSKCGNIAYAEKSF 453
+ I + +A I+ ++ D L S L+D G + A F
Sbjct: 435 TTL-----IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 454 QLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 511
+ + S + D+ YN+MI G G LF + +KP+ +T+ ++S +
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 512 GLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
GL E + F MKE+ LP+ Y ++ + R + E +R++
Sbjct: 550 GLKEEADALFREMKEE-GPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 175/409 (42%), Gaps = 44/409 (10%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP----HRNAFSWNAIIMAYIKAH 73
Q ++ G FT N LIH H EA L D+M + ++ ++ K
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 74 NLTQARALFDSASHRDL----VSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 129
++ A +L + V YN+++ A + AL+LF M D G+
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND-ALNLFTEM----DNKGIRPN 290
Query: 130 TLTTMLNLSAKLRVVC-YGK-----QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 183
+T ++ +R +C YG+ ++ S M++ + + S+LID + K G EA
Sbjct: 291 VVT----YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 184 NVFSGCDGVV------DLVSKNAMVAACCRDGKMDMALNVF---WKNPEFNDTVSWNTLI 234
++ D ++ D+ + ++++ C ++D A ++F F + V++NTLI
Sbjct: 347 KLY---DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 235 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC 294
G+ + ++ + LF EM ++G+ N T +++ + + V ++ +
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 295 SNQFVSSGIVDFYCKCGNMRYAESVYAGI--GIKSP--FATSSLIAGYSSKGNMTKAKRL 350
+ S ++D C G + A V+ + P + + +I G G + L
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 351 FDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 395
F SLS + N V +T + SG+ + E LFRE + E +PD+
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK-EEGPLPDS 571
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 143/606 (23%), Positives = 239/606 (39%), Gaps = 85/606 (14%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQ 77
Q+ K LA + L+S+ G+ A +D +R S N ++ L
Sbjct: 13 QSKKMSLAKRFAQLRKASPLFSLRGVYFSAAS-YD---YREKLSRNVLL-----DLKLDD 63
Query: 78 ARALF----DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
A LF S +V +N +LSA A + D V + L RMQ+ R I D +
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLV-ISLGERMQNLR--ISYDLYSYNI 120
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA----------- 182
++N + + + M+K + LSSL++ Y EA
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 183 -------YN----------------------VFSGCDGVVDLVSKNAMVAACCRDGKMDM 213
+N V GC DL + +V C+ G +D+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP--DLFTYGTVVNGLCKRGDIDL 238
Query: 214 ALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLS 270
AL++ K + D V + T+I + AL LF EM KGI N T S++
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI- 297
Query: 271 ACTGLKCL-KLGKCVHALVLKNDGC-----SNQFVSSGIVDFYCKCGNMRYAESVYAGIG 324
+CL G+ A L +D N S ++D + K G + AE +Y +
Sbjct: 298 -----RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 325 IKS--P--FATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCE 376
+S P F SSLI G+ + +AK +F+ + + N V + L G+ K+++ E
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 377 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 436
+LFRE + L+ +T+ ++ + ++ ++ + D S L
Sbjct: 413 EGMELFREM-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 437 VDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 494
+D K G + A F+ + S + D+ YN+MI G G LF + +
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 495 KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 554
KP+ I + ++S +GL E + F MKED LP Y ++ R +
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKED-GTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 555 EFMRKI 560
E ++++
Sbjct: 591 ELIKEM 596
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 198/457 (43%), Gaps = 75/457 (16%)
Query: 30 TCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAHNLTQARALFDSA 85
T N LIH +H EA L D+M R + F++ ++ K ++ A +L
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 86 S----HRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKL 141
D+V Y +++ A + AL+LF M D G+ +T ++ +
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVND-ALNLFTEM----DNKGIRPNVVT----YNSLI 297
Query: 142 RVVC-YGK-----QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV-- 193
R +C YG+ ++ S M++ + + S+LID + K G EA ++ D ++
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY---DEMIKR 354
Query: 194 ----DLVSKNAMVAACCRDGKMDMALNVF---WKNPEFNDTVSWNTLIAGYVQNGYMERA 246
D+ + ++++ C ++D A ++F F + V++NTLI G+ + +E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHAL-VLK---NDGCSNQFVS-S 301
+ LF EM ++G+ N T +++ GL + G C A + K +DG ++ S
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQ---GL--FQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 302 GIVDFYCKCGNMRYAESV--YAGIGIKSP--FATSSLIAGYSSKGNMTKAKRLFDSLS-- 355
++D CK G + A V Y P + + +I G G + LF SLS
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 356 --ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 413
+ N +++T + SG+ + E LFRE + + +P++
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMK-EDGTLPNS------------------ 570
Query: 414 GKQTHAYILRTKLNMDEKLASA-LVDMYSKCGNIAYA 449
T+ ++R +L +K ASA L+ CG + A
Sbjct: 571 --GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 605
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 178/413 (43%), Gaps = 34/413 (8%)
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNG 241
V GC DLV+ +V C+ G D+A N+ K + + +NT+I G +
Sbjct: 213 VAKGCQP--DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL-KLGKCVHALVLKNDGCSNQ--- 297
+M+ AL LF EM KGI N T +S++S CL G+ A L +D +
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLIS------CLCNYGRWSDASRLLSDMIERKINP 324
Query: 298 --FVSSGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLF 351
F S ++D + K G + AE +Y + I T SSLI G+ + +AK++F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 352 DSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAI 407
+ + + + V + L G+ K ++ E ++FRE + L+ +T + N+L
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGNT-VTYNILIQGLF 442
Query: 408 QA-TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVI 464
QA + ++ ++ + + + L+D K G + A F+ + S + +
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 465 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 524
YN+MI G G LF + +KPD + + ++S +G E + F M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 525 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDATIWGAFLN 574
KED LP Y ++ R E + E MR DA+ G N
Sbjct: 563 KED-GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 170/430 (39%), Gaps = 66/430 (15%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRN------------------- 58
Q +G + T N LIH +H EA L D+M +
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 59 ----AFS----------------WNAIIMAYIKAHNLTQARALFDSASHR----DLVSYN 94
AF+ +N II K ++ A LF + ++V+Y+
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 95 SMLSA---YAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMH 151
S++S Y + D+ R I D T + +++ K + ++++
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIER------KINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 152 SYMVKTANDLSKFALSSLID---MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRD 208
MVK + D S SSLI+ M+ + ++ + D+V+ N ++ C+
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 209 GKMDMALNVFWKNPE---FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTL 265
+++ + VF + + +TV++N LI G Q G + A +F EM+ G+ N T
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 266 ASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGI 325
++L L+ V + ++ + + +++ CK G + ++ + +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 326 KS--P--FATSSLIAGYSSKGNMTKAKRLFDSLSE----RNYVVWTALCSGYVKSQQCEA 377
K P A +++I+G+ KG+ +A LF + E N + L ++ EA
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 589
Query: 378 VFKLFREFRT 387
+L +E R+
Sbjct: 590 SAELIKEMRS 599
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 215/484 (44%), Gaps = 45/484 (9%)
Query: 141 LRVVCYGKQMHSYMVKTANDL-------SKFALSSLIDMYSKCGSFREAYNV-----FSG 188
+R C GK++ + + AN++ S LID + K G EA F G
Sbjct: 184 IRGFCEGKELEKAL-ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDT---VSWNTLIAGYVQNGYMER 245
+ DLV +++ C G++D +F + E D+ +++NTLI G+ + G ++
Sbjct: 243 LEA--DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300
Query: 246 ALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 305
A +F MIE+G+ N +T ++ G+ K + L+++ D N + I++
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIIN 360
Query: 306 FYCKCGNMRYAESVYAGIGIKSP----FATSSLIAGYSSKGNMTKAKRLF------DSLS 355
CK G + A + + + + L+ G +KG++ +A +L S +
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420
Query: 356 ERNYVVWTALCSGYVKS---QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 412
+ + + + AL G K Q ++ L E + +++ + L A + +
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 413 LGKQTHAYILRTKLNMDEKLASALVDMYSKCG--NIAYAEKSFQLVTDSDRDVILYNVMI 470
L KQ I +K+ + +A++D + K G N+A V++ V YN ++
Sbjct: 481 LWKQ----ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 471 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNV 530
+ G ++A +LF+EM + + PD ++F ++ G ++ E + M +
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR-AGL 595
Query: 531 LPEIYHYACMVDMYGRGNQLEKAVEFMRKI---PIQIDATIWGAFLNAC----KINNNTT 583
P+++ Y+ +++ + + L++A+ F K+ + DA I + L C + + T
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTE 655
Query: 584 LVKQ 587
LVK+
Sbjct: 656 LVKK 659
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 144/371 (38%), Gaps = 85/371 (22%)
Query: 199 NAMVAACCRD---GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
N ++ CR+ GK L +N D S+NT+I G+ + +E+AL L EM
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-- 203
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI-VDFYCKCGNMR 314
K GCS V+ GI +D +CK G M
Sbjct: 204 ----------------------------------KGSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 315 YAESVYAG---IGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERN----YVVWTALC 366
A +G+++ +SLI G+ G + + K LFD + ER + + L
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL-GACAIQATLSLGKQTHAYILRTK 425
G+ K Q + ++F EF + P+ ++ G C + GK A L
Sbjct: 290 RGFCKLGQLKEASEIF-EFMIERGVRPNVYTYTGLIDGLCGV------GKTKEALQL--- 339
Query: 426 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 485
LN+ M K D + + + YN++I G A+++
Sbjct: 340 LNL----------MIEK---------------DEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 486 FQEMLKISLKPDAITFVALLSA-CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY 544
+ M K +PD IT+ LL C L E + ++ +K+ P++ Y ++
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 545 GRGNQLEKAVE 555
+ N+L +A++
Sbjct: 435 CKENRLHQALD 445
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 111/537 (20%), Positives = 205/537 (38%), Gaps = 83/537 (15%)
Query: 21 KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNA----FSWNAIIMAYIKAHNLT 76
++ L +F+ N +I + L++A +L ++M +W +I A+ KA +
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 77 QARALFDSAS----HRDLVSYNSMLSAYAGADGCDTVALD----LFARMQSARDTIGMDE 128
+A DLV Y S++ + CD LD LF + D+
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGF-----CDCGELDRGKALFDEVLERGDSPC--A 282
Query: 129 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA---YNV 185
IT T++ KL + ++ +M++ + + + LID G +EA N+
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 186 FSGCDGVVDLVSKNAMVAACCRDGKMDMALNV---FWKNPEFNDTVSWNTLIAGYVQNGY 242
D + V+ N ++ C+DG + A+ + K D +++N L+ G G
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
++ A L M++ S+ T + +H L
Sbjct: 403 LDEASKLLYLMLKD-------------SSYTDPDVISYNALIHGL--------------- 434
Query: 303 IVDFYCKCGNMRYAESVY----AGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE-- 356
CK + A +Y +G T+ L+ G++ KA L+ +S+
Sbjct: 435 -----CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 357 --RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 414
RN +TA+ G+ K+ L + R +E L P C + + G
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE-LQPSVFDY-----NCLLSSLCKEG 543
Query: 415 KQTHAYILRTKLNMDEKLASA-----LVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYN 467
A+ L ++ D ++D K G+I AE ++ + D+ Y+
Sbjct: 544 SLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYS 603
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG----LVELGEKF 520
+I + G+ ++AI F +M+ +PDA ++L C +G L EL +K
Sbjct: 604 KLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 22/308 (7%)
Query: 30 TCNQLIHLYSIHGLLQEAHKLFDKMPHRNAF------SWNAIIMAYIKAHNLTQARALFD 83
T N L+ G L EA KL M +++ S+NA+I K + L QA ++D
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 84 SASHR----DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSA 139
+ D V+ N +L++ A G A++L+ ++ ++ I + T T M++
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKA-GDVNKAMELWKQISDSK--IVRNSDTYTAMIDGFC 505
Query: 140 KLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC---DGVVDLV 196
K ++ K + M + S F + L+ K GS +A+ +F + D+V
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 197 SKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFIEM 253
S N M+ + G + A ++ D +++ LI +++ GY++ A++ F +M
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Query: 254 IEKGIEYNQHTLASVLSACTGL-KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK-CG 311
++ G E + H SVL C + KL + V LV K D ++ ++ ++D+ C
Sbjct: 626 VDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDK-DIVLDKELTCTVMDYMCNSSA 684
Query: 312 NMRYAESV 319
NM A+ +
Sbjct: 685 NMDLAKRL 692
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 131/601 (21%), Positives = 257/601 (42%), Gaps = 81/601 (13%)
Query: 23 GLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAHNLTQA 78
G+ + +T I Y G A + F+KM + N + NA + + KA +A
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 79 RALF----DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
+ +F D D V+YN M+ Y+ D A+ L + M + D I + ++
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE-AIKLLSEMM--ENGCEPDVIVVNSL 544
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG-----C 189
+N K V +M M + + ++L+ K G +EA +F G C
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 190 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERA 246
+ ++ N + C++ ++ +AL + +K + D ++NT+I G V+NG ++ A
Sbjct: 605 PP--NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK---------LGKCVH-----------A 286
+ F +M +K + + TL ++L ++ L C
Sbjct: 663 MCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIG 721
Query: 287 LVLKNDGCSN------QFVSSGI-----------VDFYCKCGNMRYAESVYA----GIGI 325
+L G N + V++GI + + CK N+ A +++ +G+
Sbjct: 722 SILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGV 781
Query: 326 KSPFATSSLIAGYSSKGNMTK-AKRLFDSLSE----RNYVVWTALCSGYVKSQQCEAVFK 380
+ T +L+ G + +M + A+ +F + + + L Y KS + + +F+
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 381 LFREFRTTEA---LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS--A 435
L++E T E I ++I ++ A + L L Y L + + +
Sbjct: 842 LYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL-----YYDLMSDRDFSPTACTYGP 896
Query: 436 LVDMYSKCGNIAYAEKSFQLVTD--SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
L+D SK G + A++ F+ + D + +YN++I G+ G + A LF+ M+K
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 494 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
++PD T+ L+ G V+ G +F +KE + P++ Y +++ G+ ++LE+A
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES-GLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 554 V 554
+
Sbjct: 1016 L 1016
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 118/559 (21%), Positives = 214/559 (38%), Gaps = 87/559 (15%)
Query: 21 KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAHNLT 76
K G + T L+ G EA D M + N ++N +I ++ H L
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Query: 77 QARALF---DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
A LF +S + + Y G G AL+ F +M++ I + +
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK--GIAPNIVACNA 473
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS-----G 188
L AK KQ+ + + ++ YSK G EA + S G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMER 245
C+ D++ N+++ + ++D A +F + E V++NTL+AG +NG ++
Sbjct: 534 CEP--DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 246 ALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 305
A+ LF M++KG N T ++ CL C N V+ +
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFD------CL---------------CKNDEVTLALKM 630
Query: 306 FYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTAL 365
+ K +M V F +++I G G + +A F + + Y + L
Sbjct: 631 LF-KMMDMGCVPDV---------FTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTL 680
Query: 366 CS---GYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
C+ G VK+ E +K II N L CA Q + IL
Sbjct: 681 CTLLPGVVKASLIEDAYK----------------IITNFLYNCADQPANLFWEDLIGSIL 724
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 482
A A +D ++++E+ D D IL ++ H+ A
Sbjct: 725 ----------AEAGID-----NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSG-A 768
Query: 483 IQLFQEMLK-ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 541
LF++ K + ++P T+ L+ ++E+ + F+ +K +P++ Y ++
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST-GCIPDVATYNFLL 827
Query: 542 DMYGRGNQLEKAVEFMRKI 560
D YG+ ++++ E +++
Sbjct: 828 DAYGKSGKIDELFELYKEM 846
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 120/542 (22%), Positives = 216/542 (39%), Gaps = 73/542 (13%)
Query: 1 MKSLIVRDALVVYRDHVQAIKSGLASSIFTCNQLI-------HLYSIHGLLQEAHKLFDK 53
+KS +A+ VYR + I G S+ T + L+ + S+ GLL+E L K
Sbjct: 199 LKSRFCTEAMEVYR---RMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 54 MPHRNAFSWNAIIMAYIKAHNLTQA----RALFDSASHRDLVSYNSMLSAYAGADGCDTV 109
N +++ I +A + +A + + D D+V+Y ++ A A D
Sbjct: 256 ---PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD-C 311
Query: 110 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 169
A ++F +M++ R D +T T+L+ + R + KQ S M K + + L
Sbjct: 312 AKEVFEKMKTGRHK--PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 170 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS 229
+D K G+F EA++ L+V + +
Sbjct: 370 VDALCKAGNFGEAFD-----------------------------TLDVMRDQGILPNLHT 400
Query: 230 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHAL-- 287
+NTLI G ++ ++ AL LF M G++ +T + K G V AL
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG-----KSGDSVSALET 455
Query: 288 --VLKNDGCSNQFVSSGIVDF-YCKCGNMRYAESVYAG---IGIKSPFATSSLIAG-YSS 340
+K G + V+ + K G R A+ ++ G IG+ T +++ YS
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 341 KGNMTKAKRLFDSL----SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTM 396
G + +A +L + E + +V +L + K+ + + +K+F R E + T+
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF--MRMKEMKLKPTV 573
Query: 397 IIVN-VLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 455
+ N +L + + +++ + + L D K + A K
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 456 VTDSD--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGL 513
+ D DV YN +I G +G +A+ F +M K+ + PD +T LL L
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASL 692
Query: 514 VE 515
+E
Sbjct: 693 IE 694
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 118/598 (19%), Positives = 243/598 (40%), Gaps = 71/598 (11%)
Query: 24 LASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP----HRNAFSWNAIIMAYIKAHNLTQA- 78
L + TCN ++ + G L+E +FD M R+ ++ I + L QA
Sbjct: 114 LVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAP 173
Query: 79 ---RALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM--QSARDTIGMDEITLTT 133
R + + + SYN ++ + C T A++++ RM + R ++ T ++
Sbjct: 174 YALRKMREFGFVLNAYSYNGLIHLLLKSRFC-TEAMEVYRRMILEGFRPSLQ----TYSS 228
Query: 134 MLNLSAKLR----VVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF--- 186
++ K R V+ K+M + +K + + + I + + G EAY +
Sbjct: 229 LMVGLGKRRDIDSVMGLLKEMETLGLKP----NVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 187 --SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK---NPEFNDTVSWNTLIAGYVQNG 241
GC D+V+ ++ A C K+D A VF K D V++ TL+ + N
Sbjct: 285 DDEGCGP--DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNR 342
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHAL-VLKNDGC-SNQFV 299
++ + EM + G + T ++ A K G+ L V+++ G N
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVVTFTILVDALC--KAGNFGEAFDTLDVMRDQGILPNLHT 400
Query: 300 SSGIVDFYCKCGNMRY-----AESVYA---GIGIK-SPFATSSLIAGYSSKGNMTKAKRL 350
+ ++ CG +R A ++ +G+K + + I Y G+ A
Sbjct: 401 YNTLI-----CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 351 FDSLSERNYVVWTALCSGYV-------KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 403
F+ + + C+ + + ++ + +F ++ L+PD+ + N++
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI----GLVPDS-VTYNMMM 510
Query: 404 ACAIQ-ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--D 460
C + + + + ++ D + ++L++ K + A K F + +
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 570
Query: 461 RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF 520
V+ YN ++AG +G +AI+LF+ M++ P+ ITF L V L K
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM 630
Query: 521 FMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKI 578
M D +P+++ Y ++ + Q+++A+ F Q+ ++ F+ C +
Sbjct: 631 LFKMM-DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH----QMKKLVYPDFVTLCTL 683
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 117/541 (21%), Positives = 224/541 (41%), Gaps = 56/541 (10%)
Query: 24 LASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAHNLTQA- 78
L ++ T N L+ +G +QEA +LF+ M + N ++N + K +T A
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 79 RALF---DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 135
+ LF D D+ +YN+++ +G A+ F +M+ + D +TL T+L
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLV-KNGQVKEAMCFFHQMKK---LVYPDFVTLCTLL 684
Query: 136 NLSAKLRVV--CYGKQMHSYMVKTANDLSKFALSSLI-DMYSKCG-----SFREAYNVFS 187
K ++ Y K + +++ A+ + LI + ++ G SF E
Sbjct: 685 PGVVKASLIEDAY-KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANG 743
Query: 188 GC-DGVVDLVSKNAMVAACCRDGKMDMALNVFWK-------NPEFNDTVSWNTLIAGYVQ 239
C DG LV ++ C+ + A +F K P+ ++N LI G ++
Sbjct: 744 ICRDGDSILV---PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLP---TYNLLIGGLLE 797
Query: 240 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL----KCLKLGKCVHALVLKNDGCS 295
+E A +F+++ G + T +L A + +L K + + + +
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT 857
Query: 296 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSS-----LIAGYSSKGNMTKAKRL 350
+ V SG+V K GN+ A +Y + F+ ++ LI G S G + +AK+L
Sbjct: 858 HNIVISGLV----KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 351 FDSLSE----RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 406
F+ + + N ++ L +G+ K+ + +A LF+ E + PD ++
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM-VKEGVRPDLKTYSVLVDCLC 972
Query: 407 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS---DRDV 463
+ + G + + LN D + +++ K + A F + S D+
Sbjct: 973 MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 464 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 523
YN +I G +A +++ E+ + L+P+ TF AL+ G E + +
Sbjct: 1033 YTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Query: 524 M 524
M
Sbjct: 1093 M 1093
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 129/565 (22%), Positives = 235/565 (41%), Gaps = 64/565 (11%)
Query: 20 IKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPH----RNAFSWNAIIMAYIKAHNL 75
+KS SIF N+L+ + L +KM N +++N +I + + +
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 76 TQARALFDS----ASHRDLVSYNSMLSAYA-GADGCDTVAL-DLFARMQSARDTIGMDEI 129
+ A AL +V+ +S+L+ Y G D VAL D M DTI
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI----- 116
Query: 130 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 189
T TT++ +G +H+ + +L+D V GC
Sbjct: 117 TFTTLI----------HGLFLHNKASEAV---------ALVDRM-----------VQRGC 146
Query: 190 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERA 246
+LV+ +V C+ G +D+A N+ K D V +NT+I + +++ A
Sbjct: 147 QP--NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 305
L LF EM KGI N T +S++S C+ + + + ++ K N + ++D
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN-PNLVTFNALID 263
Query: 306 FYCKCGNMRYAESVYAGIGIKS--P--FATSSLIAGYSSKGNMTKAKRLFDSLSERNYV- 360
+ K G AE ++ + +S P F +SLI G+ + KAK++F+ + ++
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 361 ---VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 417
+ L G+ KS++ E +LFRE + L+ DT+ ++ ++
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 418 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAGYAH 475
++ + D S L+D G + A + F + S+ D+ +Y MI G
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 476 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 535
G + LF + +KP+ +T+ ++S + L++ MKED LP+
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED-GPLPDSG 501
Query: 536 HYACMVDMYGRGNQLEKAVEFMRKI 560
Y ++ + R + E +R++
Sbjct: 502 TYNTLIRAHLRDGDKAASAELIREM 526
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/432 (19%), Positives = 163/432 (37%), Gaps = 81/432 (18%)
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLF 250
+L + N ++ CR ++ +AL + K + V+ ++L+ GY + A+ L
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 251 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 310
+M+E G + T ++ +H L L N + +V C+
Sbjct: 104 DQMVEMGYRPDTITFTTL---------------IHGLFLHNKASEAVALVDRMVQRGCQP 148
Query: 311 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALC 366
+ Y ++ G +G++ A L + + E + V++ +
Sbjct: 149 NLVTYG----------------VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 426
K + + LF+E T + + P+ + +++ S Q + ++ K+
Sbjct: 193 DSLCKYRHVDDALNLFKEMET-KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 427 NMDEKLASALVDMYSKCGNIAYAEK----------------------------------- 451
N + +AL+D + K G AEK
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 452 --SFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACR 509
F + D D+ YN +I G+ +LF+EM L D +T+ L+
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 510 HRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVE---FMRKIPIQIDA 566
H G + +K F M D V P+I Y+ ++D +LEKA+E +M+K I++D
Sbjct: 372 HDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 567 TIWGAFLNA-CK 577
I+ + CK
Sbjct: 431 YIYTTMIEGMCK 442
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 178/413 (43%), Gaps = 52/413 (12%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAH 73
Q ++ G T LIH +H EA L D+M R N ++ ++ K
Sbjct: 105 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 74 NLTQARALFDSAS----HRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 129
++ A L + D+V +N+++ + D AL+LF M++ I + +
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD-ALNLFKEMETK--GIRPNVV 221
Query: 130 TLTTMLNLSAKLRVVCYGK-----QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 184
T +++++ + YG+ Q+ S M++ + + ++LID + K G F EA
Sbjct: 222 TYSSLISC-----LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 185 VFSGCDGVV------DLVSKNAMVAACCRDGKMDMALNVFW---KNPEFNDTVSWNTLIA 235
+ D ++ D+ + N+++ C ++D A +F F D ++NTLI
Sbjct: 277 LH---DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 236 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL----KCLKLGKCVHALVLKN 291
G+ ++ +E LF EM +G+ + T +++ GL C K +V +
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ---GLFHDGDCDNAQKVFKQMV--S 388
Query: 292 DGCSNQFVS-SGIVDFYCKCGNMRYAESVYAGIG---IK-SPFATSSLIAGYSSKGNMTK 346
DG ++ S ++D C G + A V+ + IK + +++I G G +
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 347 AKRLFDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 395
LF SLS + N V + + SG + + + L ++ + + +PD+
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK-EDGPLPDS 500
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 25/304 (8%)
Query: 6 VRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFS 61
V DAL +++ + G+ ++ T + LI +G +A +L M + N +
Sbjct: 201 VDDALNLFK---EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 62 WNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFARM 117
+NA+I A++K +A L D R D+ +YNS+++ + D D A +F M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK-AKQMFEFM 316
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
S +D T T++ K + V G ++ M ++LI G
Sbjct: 317 VSKDCFPDLD--TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 178 SFREAYNVFSG--CDGV-VDLVSKNAMVAACCRDGKMDMALNVF--WKNPEFN-DTVSWN 231
A VF DGV D+++ + ++ C +GK++ AL VF + E D +
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 434
Query: 232 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV--L 289
T+I G + G ++ LF + KG++ N T +++S GL +L + +AL+ +
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS---GLCSKRLLQEAYALLKKM 491
Query: 290 KNDG 293
K DG
Sbjct: 492 KEDG 495
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 128/589 (21%), Positives = 260/589 (44%), Gaps = 42/589 (7%)
Query: 32 NQLIHLYSIHGLLQEAHKL-FDKM----PHRNAFSWNAIIMAYIKAHNLTQARALF-DSA 85
N LIH ++++GL+ + L + KM + F+ N +I ++ K L+ A +L +
Sbjct: 97 NSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV 156
Query: 86 SHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVC 145
D V+YN+++S G A + M + I D ++ T+++ K+
Sbjct: 157 ISIDTVTYNTVISGLC-EHGLADEAYQFLSEM--VKMGILPDTVSYNTLIDGFCKVGNFV 213
Query: 146 YGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN--VFSGCDGVVDLVSKNAMVA 203
K +V ++L+ + L+ Y + EAY V SG D D+V+ ++++
Sbjct: 214 RAKA----LVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDP--DVVTFSSIIN 267
Query: 204 ACCRDGKM---DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY 260
C+ GK+ + L + + + V++ TL+ + AL L+ +M+ +GI
Sbjct: 268 RLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPV 327
Query: 261 NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVY 320
+ ++ L+ + ++L+++ N + +VD CK G++ AE +
Sbjct: 328 DLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFII 387
Query: 321 AGIGIKSPFAT----SSLIAGYSSKGNMTKAKRLFDSLSERNYV----VWTALCSGYVKS 372
+ KS SS+I GY KG + +A L + ++N V + + G K+
Sbjct: 388 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKA 447
Query: 373 QQCEAVFKLFREFRTTEALIPDTMI--IVNVLGACA-IQATLSLGKQTHAYILRTKLNMD 429
+ E +L +E R + ++ +VN L I+ L K ++ + +D
Sbjct: 448 GKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKD----MVSKGVTLD 503
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDR--DVILYNVMIAGYAHHGFENKAIQLFQ 487
+ ++L+D++ K G+ A + + + DV+ YNV+I+G G + A ++
Sbjct: 504 QINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFG-KVGADWAYK 562
Query: 488 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRG 547
M + ++PD TF ++++ R +G E K + MK + P + +V M
Sbjct: 563 GMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK-SCGIKPSLMSCNIVVGMLCEN 621
Query: 548 NQLEKAVEFMRK---IPIQIDATIWGAFLNACKINNNTTLVKQAEEELL 593
++E+A+ + + + I + T + FL+ + + + E LL
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLL 670
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 190/423 (44%), Gaps = 44/423 (10%)
Query: 226 DTVSWNTLIAGYVQNGYMERALTL-FIEMIEKGIEYNQHTLASVL-SACTGLKCLKLGKC 283
D+ WN+LI + NG + ++L + +MI G+ + L ++ S C K+G+
Sbjct: 92 DSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFC------KVGRL 145
Query: 284 VHAL-VLKNDGCSNQFVS-SGIVDFYCKCGNMRYA-----ESVYAGIGIKSPFATSSLIA 336
A+ +L+N S V+ + ++ C+ G A E V GI + + ++LI
Sbjct: 146 SFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGI-LPDTVSYNTLID 204
Query: 337 GYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTM 396
G+ GN +AK L D +SE N + T L S Y A+ + +R+ PD +
Sbjct: 205 GFCKVGNFVRAKALVDEISELNLITHTILLSSY---YNLHAIEEAYRDM-VMSGFDPDVV 260
Query: 397 I---IVNVL--GACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI---AY 448
I+N L G ++ L L + + + + LVD K NI A
Sbjct: 261 TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTY-----TTLVDSLFK-ANIYRHAL 314
Query: 449 AEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 508
A S +V D+++Y V++ G G +A + F+ +L+ + P+ +T+ AL+
Sbjct: 315 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 374
Query: 509 RHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATI 568
G + E F ++ + +V+P + Y+ M++ Y + LE+AV +RK+ Q +
Sbjct: 375 CKAGDLSSAE-FIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ--NVV 431
Query: 569 WGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQL-ANVYAAEGKWNEMGRIR--KE 625
F I+ L K +EE + +E R + + N Y + N + RI KE
Sbjct: 432 PNGFTYGTVIDG---LFKAGKEE-MAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487
Query: 626 MRG 628
++G
Sbjct: 488 VKG 490
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 180/432 (41%), Gaps = 69/432 (15%)
Query: 9 ALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPH----RNAFSWNA 64
A+ + R+ V +I + T N +I HGL EA++ +M + S+N
Sbjct: 148 AISLLRNRVISIDT------VTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNT 201
Query: 65 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAY---------------AGAD----- 104
+I + K N +A+AL D S +L+++ +LS+Y +G D
Sbjct: 202 LIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVT 261
Query: 105 ----------GCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYM 154
G + L R + ++ + +T TT+++ K + + ++S M
Sbjct: 262 FSSIINRLCKGGKVLEGGLLLR-EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQM 320
Query: 155 VKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC---DGVVDLVSKNAMVAACCRDGKM 211
V + + L+D K G REA F + V ++V+ A+V C+ G +
Sbjct: 321 VVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDL 380
Query: 212 DMALNVFWKNPE---FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 268
A + + E + V+++++I GYV+ G +E A++L +M ++ + N T +V
Sbjct: 381 SSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTV 440
Query: 269 LSACTGLKCLKLGKCVHALVLKND----GC-SNQFVSSGIVDFYCKCGNMRYAES----- 318
+ K GK A+ L + G N ++ +V+ + G ++ +
Sbjct: 441 IDG-----LFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM 495
Query: 319 VYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQ 374
V G+ + +SLI + G+ A + + ER + V + L SG +K +
Sbjct: 496 VSKGVTLDQ-INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK 554
Query: 375 CEA--VFKLFRE 384
A +K RE
Sbjct: 555 VGADWAYKGMRE 566
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 219/521 (42%), Gaps = 60/521 (11%)
Query: 60 FSWNAIIMAYIKAHNLTQARALFDS----ASHRDLVSYNSMLSAYA-GADGCDTVAL-DL 113
+++N +I + + ++ A AL +V+ +S+L+ Y G D VAL D
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 114 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 173
M DTI T TT++ +G +H+ + +L+D
Sbjct: 181 MVEMGYRPDTI-----TFTTLI----------HGLFLHNKASEAV---------ALVDRM 216
Query: 174 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSW 230
V GC +LV+ +V C+ G D+ALN+ K D V +
Sbjct: 217 -----------VQRGCQP--NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 231 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVL 289
NT+I + +++ AL LF EM KGI N T +S++S C+ + + + ++
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 290 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS--P--FATSSLIAGYSSKGNMT 345
K N + ++D + K G AE +Y + +S P F +SL+ G+ +
Sbjct: 324 KKIN-PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 346 KAKRLFDSLSERN----YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNV 401
KAK++F+ + ++ V + L G+ KS++ E +LFRE + L+ DT+ +
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTL 441
Query: 402 LGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD- 460
+ ++ ++ + D S L+D G + A + F + S+
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 461 -RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 519
D+ +Y MI G G + LF + +KP+ +T+ ++S + L++
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 520 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
MKED LP Y ++ + R + E +R++
Sbjct: 562 LLKKMKED-GPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 197/505 (39%), Gaps = 89/505 (17%)
Query: 90 LVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQ 149
+V +N +LSA A D V + L +MQ G+ T ++N + +
Sbjct: 85 IVEFNKLLSAIAKMKKFD-VVISLGEKMQRLEIVHGL--YTYNILINCFCRRSQISLALA 141
Query: 150 MHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDG 209
+ M+K + S LSSL++ Y C G K A D
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGY---------------CHG------KRISDAVALVDQ 180
Query: 210 KMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVL 269
++M DT+++ TLI G + A+ L M+++G + N T V+
Sbjct: 181 MVEMGYR--------PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 270 SACTGLKCLKLGKCVHALVLKNDGCSNQF-----VSSGIVDFYCKCGNMRYAESVYAGI- 323
+ K G AL L N + + + + I+D CK ++ A +++ +
Sbjct: 233 NGLC-----KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 324 --GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCE 376
GI+ T SSLI+ S G + A +L + E+ N V + AL +VK +
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 377 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 436
KL+ + ++ PD +++ + L KQ +
Sbjct: 348 EAEKLYDDM-IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF---------------- 390
Query: 437 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 496
M SK D DV+ YN +I G+ +LF+EM L
Sbjct: 391 --MVSK---------------DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 497 DAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVE- 555
D +T+ L+ H G + +K F M D V P+I Y+ ++D +LEKA+E
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 556 --FMRKIPIQIDATIWGAFLNA-CK 577
+M+K I++D I+ + CK
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCK 517
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 175/409 (42%), Gaps = 51/409 (12%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAH 73
Q ++ G T LIH +H EA L D+M R N ++ ++ K
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 74 NLTQARALFDSAS----HRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 129
+ A L + D+V +N+++ + D AL+LF M++ I + +
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD-ALNLFKEMETK--GIRPNVV 296
Query: 130 TLTTMLNLSAKLRVVCYGK-----QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 184
T +++++ + YG+ Q+ S M++ + + ++LID + K G F EA
Sbjct: 297 TYSSLISC-----LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 185 VFSGCDGVV------DLVSKNAMVAACCRDGKMDMALNVFW---KNPEFNDTVSWNTLIA 235
++ D ++ D+ + N++V C ++D A +F F D V++NTLI
Sbjct: 352 LY---DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 236 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL----KCLKLGKCVHALVLKN 291
G+ ++ +E LF EM +G+ + T +++ GL C K +V +
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ---GLFHDGDCDNAQKVFKQMV--S 463
Query: 292 DGCSNQFVS-SGIVDFYCKCGNMRYAESVYAGIG---IK-SPFATSSLIAGYSSKGNMTK 346
DG ++ S ++D C G + A V+ + IK + +++I G G +
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 347 AKRLFDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 391
LF SLS + N V + + SG + + + L ++ + L
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 114/560 (20%), Positives = 221/560 (39%), Gaps = 90/560 (16%)
Query: 21 KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAHNLT 76
KSG A +I T N ++H Y G + A +L D M + + ++N +I
Sbjct: 261 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI---------- 310
Query: 77 QARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLN 136
DL N + Y + D+ RM I +E+T T++N
Sbjct: 311 -----------HDLCRSNRIAKGY-------LLLRDMRKRM------IHPNEVTYNTLIN 346
Query: 137 LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG---VV 193
+ V Q+ + M+ + ++LID + G+F+EA +F +
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWK---NPEFNDTVSWNTLIAGYVQNGYMERALTLF 250
VS ++ C++ + D+A + + N +++ +I G +NG+++ A+ L
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466
Query: 251 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 310
EM + GI+ + T +++++ + K K + + + N + S ++ C+
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 526
Query: 311 GNMRYAESVYAGIGI----KSPFATSSLIAGYSSKGNMTKAKRLFDSLSE----RNYVVW 362
G ++ A +Y + + + F + L+ G + +A+ ++ N V +
Sbjct: 527 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 586
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
L +GY S + F +F E + K H
Sbjct: 587 DCLINGYGNSGEGLKAFSVFDE----------------------------MTKVGHHPTF 618
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLV--TDSDRDVILYNVMIAGYAHHGFEN 480
T +L+ K G++ AEK + + + D ++YN ++ G
Sbjct: 619 FT--------YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 540
KA+ LF EM++ S+ PD+ T+ +L+S +G + F + NVLP Y C
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730
Query: 541 VDMYGRGNQLEKAVEFMRKI 560
VD + Q + + F ++
Sbjct: 731 VDGMFKAGQWKAGIYFREQM 750
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 219/536 (40%), Gaps = 67/536 (12%)
Query: 30 TCNQLIHLYSIHGLLQEAHKLFDKMPH----RNAFSWNAIIMAYIKAHNLTQARALFDSA 85
T N LI+ +S G + A +L ++M N ++NA+I +I N +A +F
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 86 SHRDL----VSYNSMLSAYAGADG-CDTVALDLFAR---MQSARDTIGMDEITLTTMLNL 137
+ L VSY +L DG C DL AR M+ R+ + + IT T M++
Sbjct: 400 EAKGLTPSEVSYGVLL------DGLCKNAEFDL-ARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 138 SAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA-------YNVFSGCD 190
K + + + M K D S+LI+ + K G F+ A Y V +
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 512
Query: 191 GVVDLVSKNAMVAACCRDGKMDMALNVFWK---NPEFNDTVSWNTLIAGYVQNGYMERAL 247
G++ + ++ CCR G + A+ ++ D ++N L+ + G + A
Sbjct: 513 GII----YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 248 TLFIEMIEKGIEYNQHTLASVLS----ACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 303
M GI N + +++ + GLK V + K F +
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS----VFDEMTKVGHHPTFFTYGSL 624
Query: 304 VDFYCKCGNMRYAE----SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 359
+ CK G++R AE S++A ++L+ GN+ KA LF + +R+
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 360 V----VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 415
+ +T+L SG + + +E ++P+ V+ C + G+
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN-----KVMYTCFVDGMFKAGQ 739
Query: 416 QTHAYILRTKLN-----MDEKLASALVDMYSKCGNIAYAEKSFQLVTD-----SDRDVIL 465
R +++ D +A++D YS+ G I EK+ L+ + ++
Sbjct: 740 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI---EKTNDLLPEMGNQNGGPNLTT 796
Query: 466 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF 521
YN+++ GY+ + + L++ ++ + PD +T +L+ ++E+G K
Sbjct: 797 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 852
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 120/540 (22%), Positives = 220/540 (40%), Gaps = 80/540 (14%)
Query: 23 GLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP----HRNAFSWNAIIMAYIKAHNLTQA 78
G+ + + + LI+ Y G +A +FD+M H F++ +++ K +L +A
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 79 RALFDS----ASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
S + D V YN++L+A + G A+ LF M + +I D T T++
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKS-GNLAKAVSLFGEM--VQRSILPDSYTYTSL 694
Query: 135 LN-LSAKLRVVC---YGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCD 190
++ L K + V + K+ + N K + +D K G ++ D
Sbjct: 695 ISGLCRKGKTVIAILFAKEAEARGNVLPN---KVMYTCFVDGMFKAGQWKAGIYFREQMD 751
Query: 191 GV---VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDT------VSWNTLIAGYVQNG 241
+ D+V+ NAM+ R GK++ ++ PE + ++N L+ GY +
Sbjct: 752 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL---PEMGNQNGGPNLTTYNILLHGYSKRK 808
Query: 242 YMERALTLFIEMIEKGIEYNQHTLAS-VLSAC------TGLKCLKLGKCVHALVLKNDGC 294
+ + L+ +I GI ++ T S VL C GLK LK C V
Sbjct: 809 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV------ 862
Query: 295 SNQFVSSGIVDFYCKCGNMRYA---ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 351
+++ + ++ C G + +A V +GI T + ++ + + R+
Sbjct: 863 -DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 921
Query: 352 --------DSLSERNYV-VWTALCS-GYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNV 401
S R Y+ + LC G +K+ F E +I + NV
Sbjct: 922 LHEMSKQGISPESRKYIGLINGLCRVGDIKTA-----------FVVKEEMIAHKICPPNV 970
Query: 402 LGACAIQATLSLGKQTHA-----YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLV 456
+ ++A GK A ++L+ KL + L+ + K GN+ A + ++
Sbjct: 971 AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 1030
Query: 457 TDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLV 514
++ D++ YNV+I G G A +L++EM +A T+ AL+ RGL+
Sbjct: 1031 SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI-----RGLL 1085
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 181/384 (47%), Gaps = 19/384 (4%)
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLF 250
D V+ ++ C+ G +AL++F K E N V ++ +I ++G + AL+LF
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 251 IEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 309
EM KGI+ + T +S++ C K K + ++ +N + S ++D + K
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI-IPDVVTFSALIDVFVK 327
Query: 310 CGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSL----SERNYVV 361
G + A+ +Y + GI T +SLI G+ + + +A ++FD + E + V
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVN-VLGACAIQATLSLGKQTHAY 420
++ L + Y K+++ + +LFRE +++ LIP+T+ VLG C L+ K+
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREI-SSKGLIPNTITYNTLVLGFCQ-SGKLNAAKELFQE 445
Query: 421 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD--VILYNVMIAGYAHHGF 478
++ + L+D G + A + F+ + S + +YN++I G +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Query: 479 ENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYA 538
+ A LF + +KPD +T+ ++ +G + + F MKED P+ + Y
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED-GCTPDDFTYN 564
Query: 539 CMVDMYGRGNQLEKAVEFMRKIPI 562
++ + G+ L +VE + ++ +
Sbjct: 565 ILIRAHLGGSGLISSVELIEEMKV 588
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 169/385 (43%), Gaps = 25/385 (6%)
Query: 194 DLVSKNAMVAACCRDGKMDMALNVF---WKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 250
D+ + M+ CR K+ A +V WK DT++++TL+ G+ G + A+ L
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 251 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND----GCSNQFVSSG-IVD 305
M+E + L +V + GL CLK G+ ALVL + G V+ G +++
Sbjct: 164 DRMVEM---KQRPDLVTVSTLINGL-CLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 306 FYCKCGNMRYAESVYAGI---GIKSPFATSSLIAGYSSK-GNMTKAKRLFDSLSER---- 357
CK GN A ++ + IK+ S++ K G+ A LF+ + +
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 358 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 417
+ V +++L G + + K+ RE +IPD + ++ + L K+
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREM-IGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 418 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAH 475
+ ++ + D ++L+D + K + A + F L+ + D++ Y+++I Y
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 476 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 535
+ ++LF+E+ L P+ IT+ L+ G + ++ F M V P +
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS-RGVPPSVV 456
Query: 536 HYACMVDMYGRGNQLEKAVEFMRKI 560
Y ++D +L KA+E K+
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKM 481
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 152/351 (43%), Gaps = 24/351 (6%)
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLF 250
D ++ + +V C +G++ A+ + + E D V+ +TLI G G + AL L
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 251 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL-----KNDGCSNQFVSSGIVD 305
M+E G + ++ T VL+ + K G AL L + + ++ S ++D
Sbjct: 199 DRMVEYGFQPDEVTYGPVLN-----RLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 306 FYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERN--- 358
CK G+ A S++ + GIK+ T SSLI G + G ++ + RN
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 359 -YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 417
V ++AL +VK + +L+ E T + PDT+ +++ + L Q
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEM-ITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 418 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAGYAH 475
++ D S L++ Y K + + F+ ++ + I YN ++ G+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 476 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 526
G N A +LFQEM+ + P +T+ LL G + + F M++
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 129/583 (22%), Positives = 233/583 (39%), Gaps = 120/583 (20%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAH 73
+ ++S ++ ++FT N LI + G + A LFDKM + N ++N +I Y K
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 74 NLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 129
+ L S + + +L+SYN +++ V+ F + R +DE+
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVS---FVLTEMNRRGYSLDEV 311
Query: 130 TLTT--------------------MLNLSAKLRVVCYGKQMHSYMVKTAND--------- 160
T T ML V+ Y +HS M K N
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS-MCKAGNMNRAMEFLDQ 370
Query: 161 -------LSKFALSSLIDMYSKCGSFREAYNVFSGCDG---VVDLVSKNAMVAACCRDGK 210
++ ++L+D +S+ G EAY V + +V+ NA++ C GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 211 MDMALNVFWKNPE---FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 267
M+ A+ V E D VS++T+++G+ ++ ++ AL + EM+EKGI+ + T +S
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 327
++ G Q + D Y E + G+
Sbjct: 491 LIQ----------------------GFCEQRRTKEACDLY--------EEMLRVGLP-PD 519
Query: 328 PFATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFR 383
F ++LI Y +G++ KA +L + + E+ + V ++ L +G K + +L
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 384 EFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 443
+ E+ +P + ++ C+ N++ K +L+ +
Sbjct: 580 KLFYEES-VPSDVTYHTLIENCS--------------------NIEFKSVVSLIKGFCMK 618
Query: 444 GNIAYAEKSFQ--LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITF 501
G + A++ F+ L + D YN+MI G+ G KA L++EM+K +T
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Query: 502 VALLSACRHRG--------LVELGEKFFMSMKEDYNVLPEIYH 536
+AL+ A G +V + +S E VL EI H
Sbjct: 679 IALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINH 721
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 216/546 (39%), Gaps = 139/546 (25%)
Query: 34 LIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKA-HNLTQARALF----DSASHR 88
++HL HG MP S+NA++ A I++ N++ A +F +S
Sbjct: 156 IVHLAQAHGF----------MP--GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSP 203
Query: 89 DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGK 148
++ +YN ++ + A D VAL LF +M++ + +T T+++ KLR + G
Sbjct: 204 NVFTYNILIRGFCFAGNID-VALTLFDKMETKGCLPNV--VTYNTLIDGYCKLRKIDDGF 260
Query: 149 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRD 208
++ L AL L +L+S N ++ CR+
Sbjct: 261 KL----------LRSMALKGLEP----------------------NLISYNVVINGLCRE 288
Query: 209 GKMDMALNVFWKNPEFN------DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQ 262
G+M V + E N D V++NTLI GY + G +AL + EM+ G+ +
Sbjct: 289 GRMK---EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 263 HTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAG 322
T S+ +H++ CK GNM A
Sbjct: 346 ITYTSL---------------IHSM--------------------CKAGNMNRAMEFLDQ 370
Query: 323 IGIK----SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY----VVWTALCSGYVKSQQ 374
+ ++ + ++L+ G+S KG M +A R+ +++ + V + AL +G+ + +
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 375 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 434
E + + + + L PD + VL + LR K M EK
Sbjct: 431 MEDAIAVLEDMKE-KGLSPDVVSYSTVLSGFCRSYDVDEA-------LRVKREMVEKGIK 482
Query: 435 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 494
D I Y+ +I G+ +A L++EML++ L
Sbjct: 483 P--------------------------DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 495 KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 554
PD T+ AL++A G +E + M E VLP++ Y+ +++ + ++ +A
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEK-GVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 555 EFMRKI 560
+ K+
Sbjct: 576 RLLLKL 581
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/445 (18%), Positives = 185/445 (41%), Gaps = 65/445 (14%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIK 71
H + ++ GL S+ T LIH G + A + D+M R N ++ ++ + +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 72 AHNLTQA----RALFDSASHRDLVSYNSMLSAYAGADGCDTVAL-DLFARMQSARDT-IG 125
+ +A R + D+ +V+YN++++ + C T + D A ++ ++ +
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGH-----CVTGKMEDAIAVLEDMKEKGLS 447
Query: 126 MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNV 185
D ++ +T+L+ + V ++ MV+ SSLI + + +EA ++
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 186 FSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMER 245
+ + L V EF ++ LI Y G +E+
Sbjct: 508 Y-------------------------EEMLRVGLPPDEF----TYTALINAYCMEGDLEK 538
Query: 246 ALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 305
AL L EM+EKG+ + T + +++ + K + + + + +++
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 306 FYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY----VV 361
C N+ + V SLI G+ KG MT+A ++F+S+ +N+
Sbjct: 599 ---NCSNIEFKSVV-------------SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
+ + G+ ++ + L++E + L+ T+ ++ ++ A + ++ ++
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL-HTVTVIALVKALHKEGKVNELNSVIVHV 701
Query: 422 LRTKLNMDEKLASALVDMYSKCGNI 446
LR+ + + A LV++ + GN+
Sbjct: 702 LRSCELSEAEQAKVLVEINHREGNM 726
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 140/590 (23%), Positives = 236/590 (40%), Gaps = 93/590 (15%)
Query: 49 KLFDKMPH----RNAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAY 100
+LF++M H + F +N +I K + A LFD R L++YN+++ Y
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 101 AGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAND 160
A G + + RM++ D I IT T+L K +V + + M
Sbjct: 260 CKA-GNPEKSFKVRERMKA--DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 161 LSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNA-----MVAACCRDGKMDMAL 215
F S L D YS A V+ V V NA ++ A C++GK++ A
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYE--TAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 216 NVFWKNPE---FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 272
+ + + V +NT+I GY + G + A + IE +EK
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAMEK---------------- 417
Query: 273 TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK--SPFA 330
G+K + + ++ +C+ G M AE + +K SP
Sbjct: 418 QGMK------------------PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 331 TSS--LIAGYSSKGNMTKA----KRLFDSLSERNYVVW----TALCSGYVKSQQCEAVFK 380
+ LI GY K K K + D+ + N V + LC G S+ EA +
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG---SKLLEA--Q 514
Query: 381 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMY 440
+ + + P I ++ C + + + +L+ + ++ + L+D
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 441 SKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDA 498
S G ++ AE ++ DV YN +I+GY G + I L++EM + +KP
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 499 ITFVALLSACRHRGLVELGEKFF--MSMKEDYNVLPEIYH-YACMVDMYGRGNQLEKAVE 555
T+ L+S C G +EL E+ F MS+K D V + H YA DM EKA
Sbjct: 635 KTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDM-------EKAFN 686
Query: 556 FMRKI---PIQIDATIWGAF----LNACKINNNTTLVKQAEEELLKVEAD 598
+++ I +D T + + L K+ +L+ + ++ EAD
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEAD 736
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 122/537 (22%), Positives = 224/537 (41%), Gaps = 62/537 (11%)
Query: 20 IKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPH----RNAFSWNAIIMAYIKAHNL 75
+KS SIF N+L+ + L +KM N +++N +I + + +
Sbjct: 77 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 76 TQARALFDS----ASHRDLVSYNSMLSAYA-GADGCDTVAL-DLFARMQSARDTIGMDEI 129
+ A AL +V+ +S+L+ Y G D VAL D M DTI
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI----- 191
Query: 130 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 189
T TT++ +G +H+ + +L+D V GC
Sbjct: 192 TFTTLI----------HGLFLHNKASEAV---------ALVDRM-----------VQRGC 221
Query: 190 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERA 246
+LV+ +V C+ G +D+A N+ K + V ++T+I + + + A
Sbjct: 222 QP--NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 306
L LF EM KG+ N T +S++S + + + +++ N + ++D
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 307 YCKCGNMRYAESVYAGIGIKS--P--FATSSLIAGYSSKGNMTKAKRLFDSLSER----N 358
+ K G + AE +Y + +S P F SSLI G+ + +AK +F+ + + N
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
V + L +G+ K+++ + +LFRE + L+ +T+ ++ +
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 419 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHH 476
++ ++ + + L+D K G + A F+ + S + + YN+MI G
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 477 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 533
G LF + +KPD I + ++S +GL E + F M+ED LP+
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED-GPLPD 574
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 174/403 (43%), Gaps = 32/403 (7%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAH 73
Q ++ G T LIH +H EA L D+M R N ++ ++ K
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 74 NLTQARALFDSAS----HRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 129
++ A L + ++V Y++++ + D AL+LF M++ + + I
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD-ALNLFTEMENK--GVRPNVI 296
Query: 130 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 189
T +++++ ++ S M++ + + ++LID + K G EA ++
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY--- 353
Query: 190 DGVV------DLVSKNAMVAACCRDGKMDMALNVF---WKNPEFNDTVSWNTLIAGYVQN 240
D ++ D+ + ++++ C ++D A ++F F + V++NTLI G+ +
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 241 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 300
++ + LF EM ++G+ N T +++ + + V ++ + N
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 301 SGIVDFYCKCGNMRYAESVYAGIGI----KSPFATSSLIAGYSSKGNMTKAKRLFDSLS- 355
+ ++D CK G + A V+ + + + + +I G G + LF SLS
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 356 ---ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 395
+ + +++ + SG+ + E LFR+ R + +PD+
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR-EDGPLPDS 575
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 122/606 (20%), Positives = 263/606 (43%), Gaps = 50/606 (8%)
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDL----VSYNSMLSAYAGADGCDTVALDL 113
N +N ++ KA ++L+D + + +Y +++ Y+ G AL
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKG-GLKVHALCW 244
Query: 114 FARMQSARDTIGM--DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAND---------LS 162
+M IGM DE+T +L + K R ++ + K + D LS
Sbjct: 245 LGKMSK----IGMQPDEVTTGIVLQMYKKAREF---QKAEEFFKKWSCDENKADSHVCLS 297
Query: 163 KFALSSLIDMYSKCGSFREAYNVFSGC--DGVVD-LVSKNAMVAACCRDGKMDMALNVFW 219
+ +++ID Y K G +EA F +G+V V+ N M+ +G++ ++
Sbjct: 298 SYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM- 356
Query: 220 KNPEFN---DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLK 276
K + + DT ++N LI+ + +N +ERA F EM + G++ + + ++L A +
Sbjct: 357 KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRH 416
Query: 277 CLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT---SS 333
++ + + A + ++ +++ S + Y + + + S + + ++ S+
Sbjct: 417 MVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSA 476
Query: 334 LIAGYSSKGNMTKAKRLF---DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEA 390
I Y +G +++A+R+F +++R + + + Y S+ CE +LF E +
Sbjct: 477 NIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELF-ESMMSYG 535
Query: 391 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 450
+ PD ++ A G+ + T D A++ + K G + AE
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 451 KSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 508
+ ++ + + + DV++Y V+I +A G +A+ + M + + +++ + +L+
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655
Query: 509 RHRGLVELGEKFFMSMKEDYNVL--PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDA 566
G ++ E + + + N P++Y CM+++Y + + KA + + +A
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEA 715
Query: 567 TIWGAFLNACKINNN------TTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMG 620
+ + C N T + KQ E +K+ D S Y + ++A +G++ E
Sbjct: 716 NEFTFAMMLCMYKKNGRFEEATQIAKQMRE--MKILTDPLS-YNSVLGLFALDGRFKEAV 772
Query: 621 RIRKEM 626
KEM
Sbjct: 773 ETFKEM 778
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/522 (21%), Positives = 214/522 (40%), Gaps = 86/522 (16%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP---HRNAFSWNAIIMAYIKAHN 74
+ ++ G+ + T N +IH+Y +G L E L M + ++N +I + K ++
Sbjct: 323 RMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNND 382
Query: 75 LTQARALF----DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEIT 130
+ +A A F D D VSY ++L A++ + A L A M D + +DE T
Sbjct: 383 IERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEE-AEGLIAEMDD--DNVEIDEYT 439
Query: 131 LTTMLNLSAKLRVV----CYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 186
+ + + + ++ + K+ H A ++S S+ ID Y + G EA VF
Sbjct: 440 QSALTRMYVEAEMLEKSWSWFKRFH-----VAGNMSSEGYSANIDAYGERGYLSEAERVF 494
Query: 187 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFND--TVSWNTLIAGYVQNGYME 244
CC+ E N + +N +I Y + E
Sbjct: 495 -----------------ICCQ---------------EVNKRTVIEYNVMIKAYGISKSCE 522
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 304
+A LF M+ G+ ++ T +++ G+C + + S+ ++
Sbjct: 523 KACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVI 582
Query: 305 DFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER--- 357
+ K G + AE VY + I+ LI ++ GN+ +A +++ E
Sbjct: 583 SSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIP 642
Query: 358 -NYVVWTALCSGYVKS---QQCEAVF-KLFREFRTTEALIPDTMIIVNVLGACAIQ--AT 410
N V++ +L Y K + EA++ KL + T+ PD C I +
Sbjct: 643 GNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQ--YPDVYT-----SNCMINLYSE 695
Query: 411 LSLGKQTHAYI--LRTKLNMDEKLASALVDMYSKCG------NIAYAEKSFQLVTDSDRD 462
S+ ++ A ++ + +E + ++ MY K G IA + +++TD
Sbjct: 696 RSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDP--- 752
Query: 463 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVAL 504
+ YN ++ +A G +A++ F+EM+ ++PD TF +L
Sbjct: 753 -LSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 189/458 (41%), Gaps = 68/458 (14%)
Query: 229 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLS--ACTGLKCLKLGKCVHA 286
++NT+I Y ++G ++ A F M+E+GI T +++ G +LG+
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG----QLGEVTSL 355
Query: 287 LVLKNDGCSNQFVSSGI-VDFYCKCGNMRYAESVYAGI---GIKS-PFATSSLIAGYSSK 341
+ C+ + I + + K ++ A + + + G+K P + +L+ +S +
Sbjct: 356 MKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIR 415
Query: 342 GNMTKAKRLFDSLSERNYVV----WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI 397
+ +A+ L + + N + +AL YV+++ E + F+ F
Sbjct: 416 HMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRF------------ 463
Query: 398 IVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVT 457
+V G NM + SA +D Y + G ++ AE+ F
Sbjct: 464 --HVAG-----------------------NMSSEGYSANIDAYGERGYLSEAERVFICCQ 498
Query: 458 D-SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVEL 516
+ + R VI YNVMI Y KA +LF+ M+ + PD T+ L+ +
Sbjct: 499 EVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHK 558
Query: 517 GEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI---PIQIDATIWGAFL 573
G + M+E + + Y ++ + + QL A E +++ I+ D ++G +
Sbjct: 559 GRCYLEKMRET-GYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLI 617
Query: 574 NACKINNNTTLVKQAEE--ELLKVEADNGSR--YVQLANVYAAEGKWNEMGRI-RKEMRG 628
NA N V+QA E +K G+ Y L +Y G +E I RK ++
Sbjct: 618 NAFADTGN---VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS 674
Query: 629 KEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 666
T+ P +Y N + S + KA+AI+ ++
Sbjct: 675 CNKTQYPD---VYTSNCMINLYSERSMVRKAEAIFDSM 709
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 17/264 (6%)
Query: 405 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 464
C L K H I + ++D L++MYS CG A F+ + S++++
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKM--SEKNLE 321
Query: 465 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 524
+ ++I +A +GF AI +F + PD F + AC G V+ G F SM
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 525 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNTTL 584
DY + P I Y +V+MY L++A+EF+ ++P++ + +W +N +++ N L
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 585 VKQAEE--ELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYV 642
E E L N V A++ + KE K + L G V
Sbjct: 442 GDYCAEVVEFLDPTRLNKQSREGFIPVKASD--------VEKESLKKRSGILHG-----V 488
Query: 643 ENGIHVFTSGDTSHSKADAIYSTL 666
++ + F +GDT+ + D ++ L
Sbjct: 489 KSSMQEFRAGDTNLPENDELFQLL 512
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 127/571 (22%), Positives = 235/571 (41%), Gaps = 69/571 (12%)
Query: 17 VQAIKS-GLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP----HRNAFSWNAIIMAYIK 71
V+ +KS G+A +T N LI L QEA ++F++M + ++NA++ Y K
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 72 AHNLTQARALFD----SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMD 127
+H +A + + + +V+YNS++SAYA DG A++L + Q A D
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA-RDGMLDEAMEL--KNQMAEKGTKPD 383
Query: 128 EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS 187
T TT+L+ + V + M + ++ I MY G F E +F
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 188 G---CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKN-------PEFNDTVSWNTLIAGY 237
C D+V+ N ++A ++G MD ++ +K PE ++NTLI+ Y
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNG-MDSEVSGVFKEMKRAGFVPERE---TFNTLISAY 499
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 297
+ G E+A+T++ M++ G+ + T +VL+A + + V A + N+
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 298 FVSSGIVDFYC---KCGNMR-YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 353
++ Y + G M AE VY+G+ +L+ S + +A+R F
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 354 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 413
L ER + PD + +++ + ++
Sbjct: 620 LKERGFS--------------------------------PDITTLNSMVSIYGRRQMVAK 647
Query: 414 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQ--LVTDSDRDVILYNVMIA 471
Y+ ++L+ M+S+ + +E+ + L D+I YN +I
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 707
Query: 472 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE--LGEKFFMSMKEDYN 529
Y + A ++F EM + PD IT+ + + + E +G +M +
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI---KHG 764
Query: 530 VLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
P Y +VD Y + N+ ++A F+ +
Sbjct: 765 CRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 105/579 (18%), Positives = 230/579 (39%), Gaps = 99/579 (17%)
Query: 89 DLVSYNSMLSAYAGA---------------DGCDT------VALDLFARMQSA------- 120
D+ SY S++SA+A + DGC V L++F +M +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 121 -----RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 175
D I D T T++ + + Q+ M K ++L+D+Y K
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 176 CGSFREAYNVFSG--CDGV-VDLVSKNAMVAACCRDGKMDMAL---NVFWKNPEFNDTVS 229
+EA V + +G +V+ N++++A RDG +D A+ N + D +
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 230 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTG----LKCLKLGKCVH 285
+ TL++G+ + G +E A+++F EM G + N T + + + +K+ ++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 286 ALVLKND---------------------GCSNQFVSSG----------IVDFYCKCGNMR 314
L D G + +G ++ Y +CG+
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 315 YAESVYAGI---GIKSPFATSSLIAGYSSKGNMTKAK-----RLFDSLSERNYVVWTALC 366
A +VY + G+ +T + + ++G M + + D + N + + +L
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 426
Y ++ + L E + + P +++ ++ C+ L ++ + +
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSG-VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 427 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQ 484
+ D +++V +Y + +A A + + + YN ++ ++ K+ +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 485 LFQEMLKISLKPDAITFVALLSA-CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 543
+ +E+L +KPD I++ ++ A CR+ + + + F M+ + ++P++ Y +
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRD-ASRIFSEMR-NSGIVPDVITYNTFIGS 743
Query: 544 YGRGNQLEKAVEFMRKIPIQIDATIWGAFLNACKINNNT 582
Y + E+A+ +R + + C+ N NT
Sbjct: 744 YAADSMFEEAIGVVRYM-----------IKHGCRPNQNT 771
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 106/503 (21%), Positives = 195/503 (38%), Gaps = 70/503 (13%)
Query: 110 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 169
A D F + + + +D + ++++ K V M + + + L ++ +SL
Sbjct: 157 AFDWFMKQKDYQSM--LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSL 214
Query: 170 IDMYSKCGSFREAYNVF-----SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE- 223
I ++ G +REA NVF GC L++ N ++ GKM N E
Sbjct: 215 ISAFANSGRYREAVNVFKKMEEDGCKPT--LITYNVILNVF---GKMGTPWNKITSLVEK 269
Query: 224 ------FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLK 276
D ++NTLI + + A +F EM G Y++ T ++L +
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 277 CLKLGKCVHALVLKNDGCSNQFVS-SGIVDFYCKCGNMRYA---ESVYAGIGIKSP-FAT 331
+ K ++ +VL +G S V+ + ++ Y + G + A ++ A G K F
Sbjct: 330 PKEAMKVLNEMVL--NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 332 SSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 387
++L++G+ G + A +F+ + + N + A Y + + K+F E
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 388 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 447
L PD + +L S + R + + + L+ YS+CG+
Sbjct: 448 C-GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 448 YAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 505
A ++ + D+ D+ YN ++A A G ++ ++ EM KP+ +T+ +LL
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 506 SA-----------------------------------CRHRGLVELGEKFFMSMKEDYNV 530
A C L+ E+ F +KE
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE-RGF 625
Query: 531 LPEIYHYACMVDMYGRGNQLEKA 553
P+I MV +YGR + KA
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKA 648
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 122/275 (44%), Gaps = 16/275 (5%)
Query: 9 ALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP----HRNAFSWNA 64
A+ VYR + + +G+ + T N ++ + G+ +++ K+ +M N ++ +
Sbjct: 508 AMTVYR---RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 65 IIMAYIKAHNLTQARALFDSASHRDLVSYNSML--SAYAGADGCDTVALDLFARMQSARD 122
++ AY + +L + + ++ ++L + CD + A +
Sbjct: 565 LLHAYANGKEIGLMHSLAEEV-YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 123 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 182
D TL +M+++ + ++V + YM + S +SL+ M+S+ F ++
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 183 YNVFSG--CDGV-VDLVSKNAMVAACCRDGKMDMALNVF--WKNPEF-NDTVSWNTLIAG 236
+ G+ D++S N ++ A CR+ +M A +F +N D +++NT I
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 237 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 271
Y + E A+ + MI+ G NQ+T S++
Sbjct: 744 YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 174/409 (42%), Gaps = 60/409 (14%)
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNG 241
V GC DLV+ A++ C+ G+ D+ALN+ K + D V +NT+I G +
Sbjct: 207 VVKGCQP--DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVS 300
+M+ A LF +M KGI+ + T ++S C + + + ++ KN F +
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 301 SGIVDFYCKCGNMRYAESVYAGIGIKSP------FATSSLIAGYSSKGNMTKAKRLFDSL 354
+ ++D + K G + AE +Y + +KS A ++LI G+ + + +F +
Sbjct: 325 A-LIDAFVKEGKLVEAEKLYDEM-VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 355 SER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT 410
S+R N V +T L G+ +++ C+ +F++ ++ + PD M
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSDGVHPDIMTY------------ 429
Query: 411 LSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR--DVILYNV 468
+ L+D GN+ A F+ + D D++ Y
Sbjct: 430 -----------------------NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 469 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 528
MI G LF + +KP+ +T+ ++S +GL E + F+ MKED
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED- 525
Query: 529 NVLPEIYHYACMVDMYGR-GNQLEKA--VEFMRKIPIQIDATIWGAFLN 574
LP Y ++ R G++ A ++ MR DA+ +G N
Sbjct: 526 GPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 170/395 (43%), Gaps = 28/395 (7%)
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFI 251
+V+ N+++ C ++ A+ + + E DTV++ TL+ G Q+ A+ L
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 204
Query: 252 EMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF-----VSSGIVDF 306
M+ KG + + T +V++ K G+ AL L N + + + I+D
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLC-----KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDG 259
Query: 307 YCKCGNMRYAESVYAGI---GIKSP-FATSSLIAGYSSKGNMTKAKRLFDSLSERN---- 358
CK +M A ++ + GIK F + LI+ + G + A RL + E+N
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
V + AL +VK + KL+ E ++ PD + ++ + G +
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 419 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF-QLVTDS-DRDVILYNVMIAGYAHH 476
+ + L + + L+ + + + A+ F Q+V+D D++ YN+++ G ++
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 477 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 536
G A+ +F+ M K +K D +T+ ++ A G VE G F S+ V P +
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVT 498
Query: 537 YACMVDMYGRGNQLEKA----VEFMRKIPIQIDAT 567
Y M+ + R E+A VE P+ T
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 124/265 (46%), Gaps = 20/265 (7%)
Query: 23 GLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFS----WNAIIMAYIKAHNLTQA 78
G+ +FT N LI +G +A +L M +N +NA+I A++K L +A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 79 RALFDS---ASH--RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
L+D + H D+V+YN+++ + + +++F M S R +G + +T TT
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE-GMEVFREM-SQRGLVG-NTVTYTT 396
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS---GCD 190
+++ + R + + MV + L+D G+ A VF D
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 191 GVVDLVSKNAMVAACCRDGKMDMALNVF----WKNPEFNDTVSWNTLIAGYVQNGYMERA 246
+D+V+ M+ A C+ GK++ ++F K + N V++ T+++G+ + G E A
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN-VVTYTTMMSGFCRKGLKEEA 515
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSA 271
LF+EM E G N T +++ A
Sbjct: 516 DALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 146/341 (42%), Gaps = 27/341 (7%)
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLK----CLKLGKCVHALVLKNDG 293
+Q+ ++ A+ LF +M++ + + +LSA + + LG+ + L + +
Sbjct: 51 LQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH-- 108
Query: 294 CSNQFVSSGIVDFYCKCGNMRYAESVYA-----GIGIKSPFATSSLIAGYSSKGNMTKAK 348
N + S ++++C+ + A ++ G G S +SL+ G+ +++A
Sbjct: 109 --NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYG-PSIVTLNSLLNGFCHGNRISEAV 165
Query: 349 RLFDSLSERNY----VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 404
L D + E Y V +T L G + + L E + PD + V+
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV-ERMVVKGCQPDLVTYGAVING 224
Query: 405 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD---- 460
+ L + + K+ D + + ++D K + + +F L +
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK---YKHMDDAFDLFNKMETKGI 281
Query: 461 -RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 519
DV YN +I+ ++G + A +L +ML+ ++ PD + F AL+ A G + EK
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 520 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
+ M + + P++ Y ++ + + ++E+ +E R++
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 111/520 (21%), Positives = 218/520 (41%), Gaps = 68/520 (13%)
Query: 32 NQLIHLYSIHGLLQEAHKLFDKMP----HRNAFSWNAIIMAYIKAHNLTQARALFDS--A 85
N ++ G ++ A + MP + S+N++I + + ++ A + +S A
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119
Query: 86 SH-----RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNL--- 137
SH D+VS+NS+ + ++ D V F M + +T +T ++
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLDEV----FVYMGVMLKCCSPNVVTYSTWIDTFCK 175
Query: 138 SAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV---VD 194
S +L++ K HS M + A + + LID Y K G A +++ V ++
Sbjct: 176 SGELQLAL--KSFHS-MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFI 251
+V+ A++ C+ G+M A ++ + E +++ + T+I G+ Q G + A+
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 252 EMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCG 311
+M+ +G+ + ++S G LK + + K+D + + + +++ Y K G
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 312 NMRYAESVYAGIGIKSPF-----ATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 366
M+ A ++Y + I+ F A S++I G + G + +A F + + N V++T L
Sbjct: 353 RMKAAVNMYHKL-IERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-CIEKANDVMYTVLI 410
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 426
K V +LF + + L+PD + + + Q L A+ L+T++
Sbjct: 411 DALCKEGDFIEVERLFSKI-SEAGLVPDKFMYTSWIAGLCKQGNL-----VDAFKLKTRM 464
Query: 427 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLF 486
+ L D++ Y +I G A G +A Q+F
Sbjct: 465 VQEGLLL----------------------------DLLAYTTLIYGLASKGLMVEARQVF 496
Query: 487 QEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 526
EML + PD+ F L+ A G + + M+
Sbjct: 497 DEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQR 536
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 165/370 (44%), Gaps = 42/370 (11%)
Query: 197 SKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFIEM 253
S N++V+ C+ G++ A ++ P F D +S+N+LI G+ +NG + R+ +L +E
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDI-RSASLVLES 116
Query: 254 IEKGIEY----NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS-SGIVDFYC 308
+ + + + S+ + + +K L ++LK CS V+ S +D +C
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK--CCSPNVVTYSTWIDTFC 174
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 368
K G ++ A + + KR D+LS N V +T L G
Sbjct: 175 KSGELQLALKSFHSM------------------------KR--DALSP-NVVTFTCLIDG 207
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 428
Y K+ E L++E R + + G C + + ++ ++ ++ ++
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK-KGEMQRAEEMYSRMVEDRVEP 266
Query: 429 DEKLASALVDMYSKCGNIAYAEKSF-QLVTDSDR-DVILYNVMIAGYAHHGFENKAIQLF 486
+ + + ++D + + G+ A K +++ R D+ Y V+I+G +G +A ++
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 487 QEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR 546
++M K L PD + F +++A G ++ + + E P++ + M+D +
Sbjct: 327 EDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE-RGFEPDVVALSTMIDGIAK 385
Query: 547 GNQLEKAVEF 556
QL +A+ +
Sbjct: 386 NGQLHEAIVY 395
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 131/303 (43%), Gaps = 44/303 (14%)
Query: 301 SGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSE 356
+ +V F CK G +++AE + + G + + +SLI G+ G++ A + +SL
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119
Query: 357 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 416
+ G++ + LF F + ++ + + + V+ C ++
Sbjct: 120 SH---------GFICKPDIVSFNSLFNGFSKMK-MLDEVFVYMGVMLKCCSPNVVTY--- 166
Query: 417 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYA 474
S +D + K G + A KSF + +V+ + +I GY
Sbjct: 167 -----------------STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYC 209
Query: 475 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 534
G A+ L++EM ++ + + +T+ AL+ +G ++ E+ + M ED V P
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED-RVEPNS 268
Query: 535 YHYACMVDMYGRGNQLEKAVEFMRKI---PIQIDATIWGAFLNAC----KINNNTTLVKQ 587
Y ++D + + + A++F+ K+ +++D T +G ++ K+ T +V+
Sbjct: 269 LVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED 328
Query: 588 AEE 590
E+
Sbjct: 329 MEK 331
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 202/481 (41%), Gaps = 69/481 (14%)
Query: 73 HNL--TQARALFDSASH----RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGM 126
HNL A LF H ++ + +LS A + D V + LF +MQ +G+
Sbjct: 60 HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYD-VVISLFEQMQ----ILGI 114
Query: 127 DEITLTTMLNL------SAKLRVVCY-GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 179
+ T + + S R C+ GK M+K + +SL++ Y
Sbjct: 115 PPLLCTCNIVMHCVCLSSQPCRASCFLGK-----MMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 180 REAYNVFSGCDGV---VDLVSKNAMVAACCRDGKMDMALNVFWK---NPEFNDTVSWNTL 233
+A +F G+ ++V+ ++ C++ ++ A+ +F + N + V++N L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 234 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 293
+ G + G A L +M+++ IE N T +++ A +K+GK + A L N
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF-----VKVGKLMEAKELYN-- 282
Query: 294 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 353
+ SVY + F SLI G G + +A+++F
Sbjct: 283 -------------------VMIQMSVYPDV-----FTYGSLINGLCMYGLLDEARQMF-Y 317
Query: 354 LSERN-----YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 408
L ERN V++T L G+ KS++ E K+F E + + ++ +T+ ++ +
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM-SQKGVVANTITYTVLIQGYCLV 376
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV--ILY 466
+ ++ + + D + + L+D G + A F+ + + D+ + Y
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 467 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 526
++I G G A LF + +KP+ IT+ ++S RGL+ + F MKE
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Query: 527 D 527
D
Sbjct: 497 D 497
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 176/402 (43%), Gaps = 20/402 (4%)
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNG 241
V GC DLV+ A++ C+ G+ D+ALN+ K + D V ++T+I +
Sbjct: 197 VVKGCQP--DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 301
+++ AL LF EM KGI + T +S++S + + +L+ N +
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314
Query: 302 GIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER 357
++D + K G + AE ++ + I T +SLI G+ + +A+++F + +
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 358 N----YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 413
+ V + L +G+ K+++ +LFR+ + L+ +T+ ++ +
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDM-SRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 414 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIA 471
+ ++ ++ + + L+D K G + A F+ + S + D+ YN+M
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 472 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVL 531
G G LF + +KPD I + ++S +GL E F+ MKED L
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED-GPL 552
Query: 532 PEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDATIWG 570
P+ Y ++ + R + E MR DA+ +G
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 594
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 23/269 (8%)
Query: 20 IKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAHNL 75
++ + ++ T N LI ++ G L EA KLFD+M R N ++N++I + L
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 76 TQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITL 131
+A+ +F + D+V+YN++++ + A ++LF M S R +G + +T
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV-VDGMELFRDM-SRRGLVG-NTVTY 418
Query: 132 TTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG 191
TT+++ + + + MV + ++L+D K G +A VF
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 192 V---VDLVSKNAMVAACCRDGKMDMALNVFWK------NPEFNDTVSWNTLIAGYVQNGY 242
D+ + N M C+ GK++ ++F P D +++NT+I+G+ + G
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP---DVIAYNTMISGFCKKGL 535
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLSA 271
E A TLFI+M E G + T +++ A
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 165/357 (46%), Gaps = 28/357 (7%)
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLF 250
D+V+ ++++ C+ ++ A+++ K E D V +NT+I G + G + A+ LF
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 251 IEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 309
M G+ + T S+++ C + + + +V++ D N + ++D + K
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVIDVFVK 256
Query: 310 CGNMRYAESVYAGIGIK--SP--FATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVV 361
G A +Y + + P F +SLI G G + +AK++ D + + + V
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
+ L +G+ KS++ + KLFRE L+ DT I N + IQ G+ A
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREM-AQRGLVGDT-ITYNTI----IQGYFQAGRPDAAQE 370
Query: 422 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR-----DVILYNVMIAGYAHH 476
+ ++++ + + + +Y C N EK+ L + + D+ YN++I G
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMN-WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429
Query: 477 GFENKAIQLFQEMLKISLKPDAITFVALLSA-CRHRGLVELGEKFFMSMKEDYNVLP 532
G A LF+ + LKPD +++ ++S CR R + + + M+ED +LP
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW-DKSDLLYRKMQED-GLLP 484
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 26 SSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAHNLTQARAL 81
+FT N LI+ +HG + EA ++ D M + + ++N +I + K+ + + L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 82 FDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM-LN 136
F + R D ++YN+++ Y A G A ++F+RM S R I I L + +N
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQA-GRPDAAQEIFSRMDS-RPNIRTYSILLYGLCMN 394
Query: 137 LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS--GCDGV-V 193
+ +V + M K+ +L + +I K G+ +A+++F C G+
Sbjct: 395 WRVEKALVLF-----ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Query: 194 DLVSKNAMVAACCRDGKMD 212
D+VS M++ CR + D
Sbjct: 450 DVVSYTTMISGFCRKRQWD 468
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 128/286 (44%), Gaps = 33/286 (11%)
Query: 5 IVRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAF 60
+V DA+ ++ D ++ + G+ + T N L+ G +A +L M R N
Sbjct: 189 LVNDAVELF-DRME--RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 61 SWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFAR 116
++ A+I ++K ++A L++ + R D+ +YNS+++ L + R
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN-----------GLCMHGR 294
Query: 117 MQSARDTIGM--------DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS 168
+ A+ + + D +T T++N K + V G ++ M + ++
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 169 LIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF--WKNPEFN- 225
+I Y + G A +FS D ++ + + ++ C + +++ AL +F + E
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 226 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 271
D ++N +I G + G +E A LF + KG++ + + +++S
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 134/332 (40%), Gaps = 64/332 (19%)
Query: 303 IVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERN 358
+++ C+C A SV + G + T SSLI G+ + A L + E
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 359 Y----VVWTALCSGYVKSQQCEAVFKLF----REFRTTEALIPDTMIIVNVLGACAIQAT 410
+ V++ + G K +LF R+ +A+ +++ V G C
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL----VAGLCC---- 221
Query: 411 LSLGKQTHAYILRTKLNMDEKLA-----SALVDMYSKCGNIAYAEKSFQLVTDS--DRDV 463
G+ + A L + M + + +A++D++ K G + A K ++ +T D DV
Sbjct: 222 --SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 464 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 523
YN +I G HG ++A Q+ M+ PD +T+ L++ V+ G K F
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 524 MKE--------DYNVLPEIYHYACMVD--------MYGRGN---------------QLEK 552
M + YN + + Y A D M R N ++EK
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEK 399
Query: 553 AV---EFMRKIPIQIDATIWGAFLNA-CKINN 580
A+ E M+K I++D T + ++ CKI N
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 218/525 (41%), Gaps = 71/525 (13%)
Query: 165 ALSSLIDMYSKCGSFREAYNVFSGCD--GV-VDLVSKNAMVAACCRDGKMDMA---LNVF 218
A ++LI + G A+ V+ GV +++ + N MV A C+DGKM+ L+
Sbjct: 202 ACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV 261
Query: 219 WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL 278
+ + D V++NTLI+ Y G ME A L M KG +T +V++
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 279 KLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT----SSL 334
+ K V A +L++ + ++ CK G++ E V++ + + SS+
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 335 IAGYSSKGNMTKAKRLFDSLSE----RNYVVWTALCSGYVK---------------SQQC 375
++ ++ GN+ KA F+S+ E + V++T L GY + Q C
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 376 E--------------------AVFKLFREFRTTEALIPDTMIIVNVL-GACAIQATLSLG 414
KLF E T AL PD+ + ++ G C + L
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEM-TERALFPDSYTLTILIDGHCKL-GNLQNA 499
Query: 415 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAG 472
+ + ++ +D + L+D + K G+I A++ + + + I Y++++
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 473 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 532
G +A +++ EM+ ++KP + +++ G GE F M + +P
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFVP 618
Query: 533 EIYHYACMVDMYGRGNQLEKAVEFMRKIP-----IQIDATIWGAFLNA-CKINNNTTLVK 586
+ Y ++ + R + KA ++K+ + D + + L+ C+ N +K
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ----MK 674
Query: 587 QAEEELLK-----VEADNGSRYVQLANVYAAEGKWNEMGRIRKEM 626
+AE L K V D S Y + N + ++ E RI EM
Sbjct: 675 EAEVVLRKMIERGVNPDR-STYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 111/513 (21%), Positives = 225/513 (43%), Gaps = 38/513 (7%)
Query: 214 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 273
+L+ + N ND+V ++ LI YVQ + A F + KG + +++ +
Sbjct: 153 SLDSTFSNCGSNDSV-FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLV 211
Query: 274 GLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-- 331
+ ++L V+ + ++ N + + +V+ CK G M + + + K +
Sbjct: 212 RIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIV 271
Query: 332 --SSLIAGYSSKGNMTKAKRLFDSLSERNY----VVWTALCSGYVKSQQCEAVFKLFREF 385
++LI+ YSSKG M +A L +++ + + + + +G K + E ++F E
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 386 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 445
+ L PD+ ++L + + ++ + + + D S+++ ++++ GN
Sbjct: 332 LRS-GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 446 IAYAEKSFQLVTDSD--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 503
+ A F V ++ D ++Y ++I GY G + A+ L EML+ D +T+
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 504 LLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP-- 561
+L R ++ +K F M E + P+ Y ++D + + L+ A+E +K+
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERA-LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 562 -IQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEA-DNGSRYVQLANVYAAEGKWNEM 619
I++D + L+ + K+ +++ E Y L N ++G E
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 620 GRIRKEMRGK--EATKLPGCSWI--YVENGIHVFTSGDTSHSK-------ADAI-YSTLV 667
R+ EM K + T + S I Y +G + G++ K D I Y+TL+
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNA--SDGESFLEKMISEGFVPDCISYNTLI 627
Query: 668 CLYG-----KLYLTFTELKQLDEIQGNIVADIF 695
YG + F +K+++E QG +V D+F
Sbjct: 628 --YGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 209/510 (40%), Gaps = 73/510 (14%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAH 73
Q + G+ I T N LI YS GL++EA +L + MP + +++N +I K
Sbjct: 260 QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319
Query: 74 NLTQARALF----DSASHRDLVSYNSML-SAYAGADGCDTVALDLFARMQSARDTIGMDE 128
+A+ +F S D +Y S+L A D +T +F+ M+S RD + D
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK--VFSDMRS-RDVVP-DL 375
Query: 129 ITLTTMLNL---SAKLRVVCYGKQMHSYMVKTANDLSKFALSS-LIDMYSKCGSFREAYN 184
+ ++M++L S L M+ VK A + + + LI Y + G A N
Sbjct: 376 VCFSSMMSLFTRSGNLDKAL----MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 185 VFS-----GCDGVVDLVSKNAMVAACCRD---GKMDMALNVFWKNPEFNDTVSWNTLIAG 236
+ + GC +D+V+ N ++ C+ G+ D N + F D+ + LI G
Sbjct: 432 LRNEMLQQGC--AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 237 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 296
+ + G ++ A+ LF +M EK I + T ++L + + K + A ++ +
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 297 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT----SSLIAGYSSKGNMTKAKRLFD 352
S +V+ C G++ A V+ + K+ T +S+I GY GN + + +
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 353 SLSERNYVV----WTALCSGYVKSQQCEAVFKLFREFRTTE-ALIPDTMIIVNVLGACAI 407
+ +V + L G+V+ + F L ++ + L+PD ++L
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL----- 664
Query: 408 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 467
H + + ++ E + +++ + DR Y
Sbjct: 665 ----------HGFCRQNQMKEAEVVLRKMIERG----------------VNPDRST--YT 696
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPD 497
MI G+ +A ++ EML+ PD
Sbjct: 697 CMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 121/534 (22%), Positives = 227/534 (42%), Gaps = 88/534 (16%)
Query: 9 ALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP----HRNAFSWNA 64
ALV++ D ++ K G + + T + LI + +G +++A + + KM + F +
Sbjct: 358 ALVLF-DKME--KEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHT 414
Query: 65 IIMAYIKAHNLTQARALFDSASHRDLVSY---NSMLSAYAGADGCDTVALDLFARMQSAR 121
II ++K +A LFD + L + N++LS + G A +L ++M+S
Sbjct: 415 IIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILS-WLCKQGKTDEATELLSKMESR- 472
Query: 122 DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR- 180
IG + ++ ++ + + + + + S +++ + + S LID G FR
Sbjct: 473 -GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID-----GCFRN 526
Query: 181 -------EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN----DTVS 229
E N + + V+ V ++ C+ G+ A + E +S
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586
Query: 230 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 289
+N++I G+ + G M+ A+ + EM GI N T S+++ C K + AL +
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL----C-KNNRMDQALEM 641
Query: 290 ----KNDGCSNQFVSSG-IVDFYCKCGNMRYAESVYA-----GIGIKSPFATSSLIAGYS 339
KN G + G ++D +CK NM A ++++ G+ P +SLI+G+
Sbjct: 642 RDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPI-YNSLISGFR 700
Query: 340 SKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 395
+ GNM A L+ + + + +T L G +K +L+ E + L+PD
Sbjct: 701 NLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV-GLVPDE 759
Query: 396 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 455
+I + +V+ SK G K F+
Sbjct: 760 IIY-----------------------------------TVIVNGLSKKGQFVKVVKMFEE 784
Query: 456 VTDSD--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 507
+ ++ +V++YN +IAG+ G ++A +L EML + PD TF L+S
Sbjct: 785 MKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 112/575 (19%), Positives = 236/575 (41%), Gaps = 75/575 (13%)
Query: 27 SIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMAYIKAHNLTQARALFDS-- 84
++ C + + L + LL+E + +P + ++ ++I+A +K N+ A L D
Sbjct: 274 AVQACCKTLDLAMANSLLREMKEKKLCVPSQETYT--SVILASVKQGNMDDAIRLKDEML 331
Query: 85 --ASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLR 142
++V+ S+++ + + AL LF +M+ ++ + +T + ++ K
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDL-VSALVLFDKME--KEGPSPNSVTFSVLIEWFRKNG 388
Query: 143 VVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC--DGVVDLVSKNA 200
+ + + M S F + ++I + K EA +F G+ ++ N
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNT 448
Query: 201 MVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFIEMIEKG 257
+++ C+ GK D A + K + VS+N ++ G+ + M+ A +F ++EKG
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 258 IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-----NQFVSSGIVDFYCKCGN 312
++ N +T + ++ C + +AL + N S N V I++ CK G
Sbjct: 509 LKPNNYTYSILIDGC-----FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 313 MRYAESVYAGIGIKSPFATS-----SLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWT 363
A + A + + S S+I G+ +G M A ++ + N + +T
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 364 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 423
+L +G K+ + + ++ E +
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNK----------------------------------- 648
Query: 424 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENK 481
+ +D AL+D + K N+ A F + + + +YN +I+G+ + G
Sbjct: 649 -GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVA 707
Query: 482 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 541
A+ L+++MLK L+ D T+ L+ G + L + + M+ ++P+ Y +V
Sbjct: 708 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQA-VGLVPDEIIYTVIV 766
Query: 542 DMYGRGNQLEKAV---EFMRKIPIQIDATIWGAFL 573
+ + Q K V E M+K + + I+ A +
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 124/556 (22%), Positives = 230/556 (41%), Gaps = 53/556 (9%)
Query: 22 SGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAHNLTQ 77
+G+A ++ T N LI + ++A D M + FS++ +I KA L
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 78 ARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 133
A LFD S R D+ YN ++ + T A++L+ R+ ++ + T
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT-AMELWDRLLED-SSVYPNVKTHNI 260
Query: 134 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCD--- 190
M++ +K V ++ M + + + SSLI G+ +A +VF+ D
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 191 GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTV---SWNTLIAGYVQNGYMERAL 247
+D+V+ N M+ CR GK+ +L + W+ E ++V S+N LI G ++NG ++ A
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEHKNSVNIVSYNILIKGLLENGKIDEAT 379
Query: 248 TLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG----- 302
++ M KG ++ T + G CV+ V K G + SSG
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIH----------GLCVNGYVNKALGVMQEVESSGGHLDV 429
Query: 303 -----IVDFYCKCGNMRYAESVYA-----GIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 352
I+D CK + A ++ G+ + S ++LI G + +A
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS-HVCNALIGGLIRDSRLGEASFFLR 488
Query: 353 SLSE---RNYVV-WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 408
+ + R VV + L G K+ + +E PD +L
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM-LENGWKPDLKTYSILLCGLCRD 547
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILY 466
+ L + L++ L D + + L+ G + A + + +++ Y
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 467 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA-CRHRGLVELGEKFFMSMK 525
N ++ G+ G N+A ++ M K+ L+PD I++ ++ C RG V +FF +
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG-VSYAMEFFDDAR 666
Query: 526 EDYNVLPEIYHYACMV 541
++ + P +Y + +V
Sbjct: 667 -NHGIFPTVYTWNILV 681
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 160/346 (46%), Gaps = 28/346 (8%)
Query: 226 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKC--LKLGKC 283
D +S++T++ GY + G +++ L M KG++ N + S++ GL C KL +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII----GLLCRICKLAEA 335
Query: 284 VHAL--VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK--SP--FATSSLIAG 337
A +++ + V + ++D +CK G++R A + + + +P +++I+G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 338 YSSKGNMTKAKRLFDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 393
+ G+M +A +LF + E + V +T L +GY K+ + F++ P
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSP 454
Query: 394 DTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF 453
+ + ++ + L + + + L + +++V+ K GNI E++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI---EEAV 511
Query: 454 QLVTDSDR-----DVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA- 507
+LV + + D + Y ++ Y G +KA ++ +EML L+P +TF L++
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 508 CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
C H G++E GEK M + P + +V Y N L+ A
Sbjct: 572 CLH-GMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 164/396 (41%), Gaps = 44/396 (11%)
Query: 177 GSFREAYNVFSGCDG---VVDLVSKNAMVAACCRDG-KMDMALNVFWKNPEFN---DTVS 229
G REA VF V+ + S N + +D K A+ VF + PE + S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 230 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALV 288
+N +I Q G ++ A L + M KG + + ++V++ C + K+ K + V
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE--V 306
Query: 289 LKNDGC-SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKA 347
+K G N ++ I+ C+ + AE ++ M +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS---------------------EMIRQ 345
Query: 348 KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL-GACA 406
L D+ VV+T L G+ K A K F E + + + PD + ++ G C
Sbjct: 346 GILPDT------VVYTTLIDGFCKRGDIRAASKFFYEMHSRD-ITPDVLTYTAIISGFCQ 398
Query: 407 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI--AYAEKSFQLVTDSDRDVI 464
I + GK H + L D + L++ Y K G++ A+ + + +V+
Sbjct: 399 IGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 465 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 524
Y +I G G + A +L EM KI L+P+ T+ ++++ G +E K
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 525 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
E + + Y ++D Y + +++KA E ++++
Sbjct: 518 -EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 173/414 (41%), Gaps = 54/414 (13%)
Query: 21 KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFS----WNAIIMAYIKAHNLT 76
+ GL + + +I L L EA + F +M + + +I + K ++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 77 QARALFDSASHRDL----VSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLT 132
A F RD+ ++Y +++S + G A LF M + D +T T
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQI-GDMVEAGKLFHEMFCK--GLEPDSVTFT 425
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
++N K + ++H++M++ + ++LID K G A + +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 193 ---VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN------DTVSWNTLIAGYVQNGYM 243
++ + N++V C+ G ++ A+ + EF DTV++ TL+ Y ++G M
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLV---GEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 244 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 303
++A + EM+ KG++ T +++ G C+H ++ + N ++ GI
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMN----------GFCLHGMLEDGEKLLNWMLAKGI 592
Query: 304 ----------VDFYCKCGNMRYAESVYA-----GIGIKSPFATSSLIAGYSSKGNMTKAK 348
V YC N++ A ++Y G+G +L+ G+ NM +A
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK-TYENLVKGHCKARNMKEAW 651
Query: 349 RLFDSLSERNYVV----WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 398
LF + + + V ++ L G++K ++ ++F + R E L D I
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR-REGLAADKEIF 704
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 127/318 (39%), Gaps = 50/318 (15%)
Query: 200 AMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 259
++ C+ + + A + + DTV + TLI G+ + G + A F EM + I
Sbjct: 324 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 260 YNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVS-SGIVDFYCKCGNMRYAE 317
+ T +++S C ++ GK H + K G V+ + +++ YCK G+M+ A
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 318 SVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALCSGY 369
V+ + G T ++LI G +G++ A L + + N + ++ +G
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 370 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 429
KS E KL EF LN D
Sbjct: 502 CKSGNIEEAVKLVGEFEA------------------------------------AGLNAD 525
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQ--LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
+ L+D Y K G + A++ + L ++ +NV++ G+ HG +L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 488 EMLKISLKPDAITFVALL 505
ML + P+A TF +L+
Sbjct: 586 WMLAKGIAPNATTFNSLV 603
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 160/346 (46%), Gaps = 28/346 (8%)
Query: 226 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKC--LKLGKC 283
D +S++T++ GY + G +++ L M KG++ N + S++ GL C KL +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII----GLLCRICKLAEA 335
Query: 284 VHAL--VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK--SP--FATSSLIAG 337
A +++ + V + ++D +CK G++R A + + + +P +++I+G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 338 YSSKGNMTKAKRLFDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 393
+ G+M +A +LF + E + V +T L +GY K+ + F++ P
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSP 454
Query: 394 DTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF 453
+ + ++ + L + + + L + +++V+ K GNI E++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI---EEAV 511
Query: 454 QLVTDSDR-----DVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA- 507
+LV + + D + Y ++ Y G +KA ++ +EML L+P +TF L++
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 508 CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
C H G++E GEK M + P + +V Y N L+ A
Sbjct: 572 CLH-GMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 164/396 (41%), Gaps = 44/396 (11%)
Query: 177 GSFREAYNVFSGCDG---VVDLVSKNAMVAACCRDG-KMDMALNVFWKNPEFN---DTVS 229
G REA VF V+ + S N + +D K A+ VF + PE + S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 230 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALV 288
+N +I Q G ++ A L + M KG + + ++V++ C + K+ K + V
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE--V 306
Query: 289 LKNDGC-SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKA 347
+K G N ++ I+ C+ + AE ++ M +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS---------------------EMIRQ 345
Query: 348 KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL-GACA 406
L D+ VV+T L G+ K A K F E + + + PD + ++ G C
Sbjct: 346 GILPDT------VVYTTLIDGFCKRGDIRAASKFFYEMHSRD-ITPDVLTYTAIISGFCQ 398
Query: 407 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI--AYAEKSFQLVTDSDRDVI 464
I + GK H + L D + L++ Y K G++ A+ + + +V+
Sbjct: 399 IGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 465 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 524
Y +I G G + A +L EM KI L+P+ T+ ++++ G +E K
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 525 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
E + + Y ++D Y + +++KA E ++++
Sbjct: 518 -EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 173/414 (41%), Gaps = 54/414 (13%)
Query: 21 KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHRNAFS----WNAIIMAYIKAHNLT 76
+ GL + + +I L L EA + F +M + + +I + K ++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 77 QARALFDSASHRDL----VSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLT 132
A F RD+ ++Y +++S + G A LF M + D +T T
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQI-GDMVEAGKLFHEMFCK--GLEPDSVTFT 425
Query: 133 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 192
++N K + ++H++M++ + ++LID K G A + +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 193 ---VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN------DTVSWNTLIAGYVQNGYM 243
++ + N++V C+ G ++ A+ + EF DTV++ TL+ Y ++G M
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLV---GEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 244 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 303
++A + EM+ KG++ T +++ G C+H ++ + N ++ GI
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMN----------GFCLHGMLEDGEKLLNWMLAKGI 592
Query: 304 ----------VDFYCKCGNMRYAESVYA-----GIGIKSPFATSSLIAGYSSKGNMTKAK 348
V YC N++ A ++Y G+G +L+ G+ NM +A
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK-TYENLVKGHCKARNMKEAW 651
Query: 349 RLFDSLSERNYVV----WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 398
LF + + + V ++ L G++K ++ ++F + R E L D I
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR-REGLAADKEIF 704
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 127/318 (39%), Gaps = 50/318 (15%)
Query: 200 AMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 259
++ C+ + + A + + DTV + TLI G+ + G + A F EM + I
Sbjct: 324 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 260 YNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVS-SGIVDFYCKCGNMRYAE 317
+ T +++S C ++ GK H + K G V+ + +++ YCK G+M+ A
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 318 SVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALCSGY 369
V+ + G T ++LI G +G++ A L + + N + ++ +G
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 370 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 429
KS E KL EF LN D
Sbjct: 502 CKSGNIEEAVKLVGEFEA------------------------------------AGLNAD 525
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQ--LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
+ L+D Y K G + A++ + L ++ +NV++ G+ HG +L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 488 EMLKISLKPDAITFVALL 505
ML + P+A TF +L+
Sbjct: 586 WMLAKGIAPNATTFNSLV 603
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 125/583 (21%), Positives = 237/583 (40%), Gaps = 106/583 (18%)
Query: 23 GLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP----HRNAFSWNAIIMAYIKAHNLTQA 78
GL FTC+ ++ + GLL+EA + F ++ ++NA++ + KA T+A
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 79 ----RALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
+ + +++ D V+YN +++AY R +++ G+ E+
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAY--------------VRAGFSKEAAGVIEM----- 376
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF-----SGC 189
M K + +++ID Y K G EA +F +GC
Sbjct: 377 -------------------MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Query: 190 -------DGVVDLVSK----NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV 238
+ V+ L+ K N M+ C DM N N +WNT++A
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLC-----DMKSNGCSPN-----RATWNTMLALCG 467
Query: 239 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKC---VHALVLKNDGCS 295
G + +F EM G E ++ T +++SA G+C V A + +
Sbjct: 468 NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA--------YGRCGSEVDASKMYGEMTR 519
Query: 296 NQFVS-----SGIVDFYCKCGNMRYAESVYAGIGIKS--PFATSS--LIAGYSSKGNMTK 346
F + + +++ + G+ R E+V + + K P TS ++ Y+ GN
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG 579
Query: 347 AKRLFDSLSERN-YVVWTALCSGYVKSQQCEAV------FKLFREFRTTEALIPDTMIIV 399
+R+ + + E + W L + + + +C A+ F LF++ PD +I
Sbjct: 580 IERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKK----HGYKPDMVIFN 635
Query: 400 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 459
++L + I L+ D ++L+DMY + G AE+ + + S
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 460 D--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG 517
D++ YN +I G+ G +A+++ EM + ++P T+ +S G+
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 518 EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
E M ++ + P + +VD Y R + +A++F+ KI
Sbjct: 756 EDVIECMAKN-DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 119/578 (20%), Positives = 235/578 (40%), Gaps = 72/578 (12%)
Query: 47 AHKLFDKMPHR----NAFSWNAIIMAYIKAHNLTQARALFDS----ASHRDLVSYNSMLS 98
A KL DK+P + + ++ I+ AY + +A LF+ LV+YN +L
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 99 AYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTA 158
+ L + M+S + DE T +T+L+ A+ ++ K+ + +
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSK--GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCG 311
Query: 159 NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG---VVDLVSKNAMVAACCRDGKMDMAL 215
+ ++L+ ++ K G + EA +V + D V+ N +VAA R G A
Sbjct: 312 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 371
Query: 216 NVF---WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 272
V K + +++ T+I Y + G + AL LF M E G N T +VLS
Sbjct: 372 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 431
Query: 273 TGLKCLKLGKCVHALV-LKNDGCS------------------NQFVS------------- 300
K + + + L +K++GCS ++FV+
Sbjct: 432 G--KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 301 -----SGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLF 351
+ ++ Y +CG+ A +Y + G + T ++L+ + KG+ + +
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 352 DSLSERNY----VVWTALCSGYVKSQQCEAVFKLFREFRTTEALI-PDTMIIVNVLGACA 406
+ + + ++ + Y K + ++ E R E I P M++ +L A
Sbjct: 550 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI--ENRIKEGQIFPSWMLLRTLLLANF 607
Query: 407 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVI 464
L+ ++ + D + ++++ ++++ AE + + + D++
Sbjct: 608 KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLV 667
Query: 465 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 524
YN ++ Y G KA ++ + + K LKPD +++ ++ RGL++ + M
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 525 KEDYNVLPEIYHYACMVDMY---GRGNQLEKAVEFMRK 559
E + P I+ Y V Y G ++E +E M K
Sbjct: 728 TE-RGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK 764
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 146/356 (41%), Gaps = 41/356 (11%)
Query: 232 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 291
+L+ G +G+ ERA+ LF + VLS+ +G LKL V + ++
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWL--------------VLSSNSG--ALKLDHQVIEIFVRI 184
Query: 292 DGCSNQF-VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRL 350
G +Q+ V++ ++D K Y V A ++++ YS G KA L
Sbjct: 185 LGRESQYSVAAKLLD---KIPLQEYLLDVRA---------YTTILHAYSRTGKYEKAIDL 232
Query: 351 FDSLSE----RNYVVWTALCSGYVK-SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGAC 405
F+ + E V + + + K + + + E R+ + L D VL AC
Sbjct: 233 FERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRS-KGLKFDEFTCSTVLSAC 291
Query: 406 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDV 463
A + L K+ A + +AL+ ++ K G A + + ++ D
Sbjct: 292 AREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADS 351
Query: 464 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 523
+ YN ++A Y GF +A + + M K + P+AIT+ ++ A G + K F S
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 524 MKEDYNVLPEIYHYACMVDMYG---RGNQLEKAVEFMRKIPIQIDATIWGAFLNAC 576
MKE +P Y ++ + G R N++ K + M+ + W L C
Sbjct: 412 MKE-AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 127/281 (45%), Gaps = 21/281 (7%)
Query: 396 MIIVNVLGA---CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKS 452
M ++ +LG C L + H I+ D +A+++MYS C ++ A K
Sbjct: 117 MDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKV 176
Query: 453 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 512
F+ + + + + VM+ + ++G+ +AI LF + KP+ F + S C G
Sbjct: 177 FEEMPEWNSGTLC--VMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTG 234
Query: 513 LVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDATIWGAF 572
V+ G F +M +Y ++P + HY + M L++A+ F+ ++P++ +W
Sbjct: 235 DVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETL 294
Query: 573 LNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEAT 632
+N +++ + L + E + K++A +R ++++ K ++ + R +
Sbjct: 295 MNLSRVHGDVELGDRCAELVEKLDA---TRLDKVSSAGLVATKASDFVKKEPSTRSE--- 348
Query: 633 KLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL 673
+ Y F D+SH + + IY TL+ L +L
Sbjct: 349 -----PYFY-----STFRPVDSSHPQMNIIYETLMSLRSQL 379
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 116/527 (22%), Positives = 221/527 (41%), Gaps = 53/527 (10%)
Query: 144 VCYGKQMHSYMVKTAND---------LSKFALSSLIDM---YSKCGSFREAYNVFSGC-- 189
VC+ +++ S +V D + L SL+D +S ++ V C
Sbjct: 54 VCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQ 113
Query: 190 ---DGVV-DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGY 242
+G+ ++ + N M+ CR K A +V K + DT ++NTLI G G
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 173
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVL-----SACTGLKCLKLGKCVHALVLKNDGCSNQ 297
+ A+ L M+E G + + T S++ S T L L L + + +K D
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA-LDLLRKMEERNVKAD----V 228
Query: 298 FVSSGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDS 353
F S I+D C+ G + A S++ + GIKS T +SL+ G G L
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 354 LSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 409
+ R N + + L +VK + + +L++E T + P+ + ++ +Q
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM-ITRGISPNIITYNTLMDGYCMQN 347
Query: 410 TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYN 467
LS ++R K + D ++L+ Y + K F+ ++ + + Y+
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 527
+++ G+ G A +LFQEM+ + PD +T+ LL G +E + F +++
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 528 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP---IQIDATIWGAFLNA-CK---INN 580
L I Y +++ +G ++E A +P ++ + + ++ CK ++
Sbjct: 468 KMDLG-IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Query: 581 NTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMR 627
L+++ EE+ A N Y L + +G ++ +EM+
Sbjct: 527 ANILLRKMEED---GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/527 (20%), Positives = 219/527 (41%), Gaps = 60/527 (11%)
Query: 12 VYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIM 67
V R I +G ++FT N +I G ++ A LF++M R + ++N++I
Sbjct: 246 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 68 AYIKAHNLTQARALF----DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT 123
+ K L F D D+++YN++++ + G + L+ + M+ +
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKF-GKLPIGLEFYREMKG--NG 362
Query: 124 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 183
+ + ++ +T+++ K ++ + + M + +++ +SLID K G+ +A+
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 184 NVFSGCDGV---VDLVSKNAMVAACCRDGKMDMALNVFWKNPE---FNDTVSWNTLIAGY 237
+ + V ++V+ A++ C +M A +F K + S+N LI G+
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 238 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 297
V+ M+RAL L E+ +GI+ + + + L+ ++ K V + + +N
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 298 FVSSGIVDFYCKCGNMRYAESVY---AGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDS 353
+ + ++D Y K GN + + I+ T LI G ++KA F+
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 354 LS-----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 408
+S + N ++TA+ G K Q EA LF + + L+PD +++
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM-VQKGLVPDRTAYTSLM-----D 656
Query: 409 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 468
G A LR K+ AE +L D++ Y
Sbjct: 657 GNFKQGNVLEALALRDKM----------------------AEIGMKL------DLLAYTS 688
Query: 469 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 515
++ G +H KA +EM+ + PD + +++L G ++
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCID 735
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 85/167 (50%), Gaps = 15/167 (8%)
Query: 436 LVDMYSKCGNIAYAEKSFQ------LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 489
++D K G++ A F+ LV D+ + YN MI G+ G + + F+EM
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDT----VTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 490 LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQ 549
+ +PD IT+ AL++ G + +G +F+ MK + + P + Y+ +VD + +
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN-GLKPNVVSYSTLVDAFCKEGM 382
Query: 550 LEKAVEF---MRKIPIQIDATIWGAFLNA-CKINNNTTLVKQAEEEL 592
+++A++F MR++ + + + + ++A CKI N + + E L
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 186/433 (42%), Gaps = 25/433 (5%)
Query: 127 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID---MYSKCGSFREAY 183
D +TL+++LN + + + MV+ F ++LI +++K
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 184 N--VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYV 238
+ V GC DLV+ +V C+ G +D+ALN+ K + V +NT+I
Sbjct: 212 DQMVQRGCQP--DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 239 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 298
+ ++E A+ LF EM KGI N T S+++ + + +L+ N
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 299 VSSGIVDFYCKCGNMRYAESVYAGIGIKS----PFATSSLIAGYSSKGNMTKAKRLFDSL 354
+ ++D + K G + AE ++ + +S + LI G+ + +AK++F +
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 355 SER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT 410
+ N + L +G+ K ++ E +LFRE + L+ +T+ ++
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM-SQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 411 LSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD--VILYNV 468
+ ++ ++ D S L+ G + A F+ + S+ + + +YN
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 469 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 528
MI G G +A LF +S+KPD +T+ ++S + L++ + F MKED
Sbjct: 509 MIEGMCKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED- 564
Query: 529 NVLPEIYHYACMV 541
LP Y ++
Sbjct: 565 GTLPNSGTYNTLI 577
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 141/342 (41%), Gaps = 41/342 (11%)
Query: 194 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLF 250
DL + + + CR ++ +AL V K + D V+ ++L+ GY + + A+ L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 251 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 310
+M+E G + + T ++ +H L L N + +V C+
Sbjct: 177 DQMVEMGYKPDTFTFTTL---------------IHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 311 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALC 366
+ Y +++ G +G++ A L + + + N V++ +
Sbjct: 222 DLVTYG----------------TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 367 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 426
K + E LF E T + + P+ + +++ S + + +L K+
Sbjct: 266 DSLCKYRHVEVAVDLFTEMET-KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 427 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQ 484
N + +AL+D + K G + AEK + + D D I YN++I G+ H ++A Q
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 485 LFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 526
+F+ M+ P+ T+ L++ VE G + F M +
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 16 HVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIK 71
H + I+ + T N LI+ + +H L EA ++F M + N ++N +I + K
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 72 AHNLTQARALFDSASHRDLV----SYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMD 127
+ LF S R LV +Y +++ + A CD+ + +F +M S R
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM-VFKQMVSNR------ 463
Query: 128 EITLTTMLNLSAKLRVVC-YGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 186
T ++ S L +C YGK + TA + K+ S +++ N+F
Sbjct: 464 --VPTDIMTYSILLHGLCSYGK------LDTALVIFKYLQKSEMEL-----------NIF 504
Query: 187 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 246
N M+ C+ GK+ A ++F D V++NT+I+G ++ A
Sbjct: 505 I----------YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 247 LTLFIEMIEKGIEYNQHTLASVLSA 271
LF +M E G N T +++ A
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRA 579
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/523 (20%), Positives = 223/523 (42%), Gaps = 40/523 (7%)
Query: 38 YSIHGLLQEAHKLFDKMP----HRNAFSWNAIIMAYIKAHNLTQARALF----DSASHRD 89
Y G +QEA +F++M FS+NAI+ + + QA ++ D D
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 90 LVSYNSMLSAYAGADGCDT----VALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVC 145
+ S+ + ++ C T AL L M S M+ + T++ +
Sbjct: 146 VYSFTIRMKSF-----CKTSRPHAALRLLNNMSS--QGCEMNVVAYCTVVGGFYEENFKA 198
Query: 146 YGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC--DGVV-DLVSKNAMV 202
G ++ M+ + L + L+ + K G +E + GV+ +L + N +
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 203 AACCRDGKMDMALN----VFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 258
C+ G++D A+ + + P+ D +++N LI G +N + A +M+ +G+
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPK-PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 259 EYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 317
E + +T ++++ C G ++L + + + N +QF ++D C G A
Sbjct: 318 EPDSYTYNTLIAGYCKG-GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 318 SVY---AGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERNYV----VWTALCSGY 369
+++ G GIK ++LI G S++G + +A +L + +SE+ + + L +G
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Query: 370 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 429
K C + + ++ PD ++ + Q + + +L ++ D
Sbjct: 437 CK-MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Query: 430 EKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAGYAHHGFENKAIQLFQ 487
++L++ K ++++ + + ++ +N+++ + ++A+ L +
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
Query: 488 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNV 530
EM S+ PDA+TF L+ G ++ F M+E Y V
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 121/541 (22%), Positives = 209/541 (38%), Gaps = 111/541 (20%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAH 73
+ + SG++ + T N+L+ + G ++E KL DK+ R N F++N I +
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 74 NLTQA----RALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 129
L A L + D+++YN+++ C ++ Q A E+
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGL-----CKN------SKFQEA-------EV 307
Query: 130 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN----- 184
L M+N G + SY T LI Y K G + A
Sbjct: 308 YLGKMVN---------EGLEPDSYTYNT-----------LIAGYCKGGMVQLAERIVGDA 347
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK------NPEFNDTVSWNTLIAGYV 238
VF+G V D + +++ C +G+ + AL +F + P + + +NTLI G
Sbjct: 348 VFNGF--VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP---NVILYNTLIKGLS 402
Query: 239 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 298
G + A L EM EKG+ T +++ G C V DG
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVN----------GLCKMGCVSDADGLVKVM 452
Query: 299 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL---- 354
+S G Y + F + LI GYS++ M A + D +
Sbjct: 453 ISKG------------YFPDI---------FTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 355 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 414
+ + + +L +G K+ + E V + ++ E + N+L +++
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTM--VEKGCAPNLFTFNIL----LESLCRYR 545
Query: 415 KQTHAYILRTKL-----NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR---DVILY 466
K A L ++ N D L+D + K G++ A F+ + ++ + Y
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605
Query: 467 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 526
N++I + A +LFQEM+ L PD T+ ++ G V LG KF + M E
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 527 D 527
+
Sbjct: 666 N 666
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 157/370 (42%), Gaps = 57/370 (15%)
Query: 207 RDGKMDMALNVFWKNPEFND----TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQ 262
R GK+ A+NVF + +F D S+N +++ V +GY ++A +++ M ++GI +
Sbjct: 88 RKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146
Query: 263 HTLA-SVLSACTGLKCLKLGKCVHALVLKND----GCSNQFVSSGIVDFYCKCGNMRYAE 317
++ + S C K + AL L N+ GC V+ YC Y E
Sbjct: 147 YSFTIRMKSFC------KTSRPHAALRLLNNMSSQGCEMNVVA------YCTVVGGFYEE 194
Query: 318 SVYA----------GIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER----NYVVW 362
+ A G+ +T + L+ KG++ + ++L D + +R N +
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL-GACA----IQATLSLGKQT 417
G + + + ++ + PD + N++ G C +A + LGK
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCL-IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK-- 311
Query: 418 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD-----RDVILYNVMIAG 472
++ L D + L+ Y K G + AE+ +V D+ D Y +I G
Sbjct: 312 ---MVNEGLEPDSYTYNTLIAGYCKGGMVQLAER---IVGDAVFNGFVPDQFTYRSLIDG 365
Query: 473 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 532
H G N+A+ LF E L +KP+ I + L+ ++G++ + M E ++P
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK-GLIP 424
Query: 533 EIYHYACMVD 542
E+ + +V+
Sbjct: 425 EVQTFNILVN 434
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 205/463 (44%), Gaps = 31/463 (6%)
Query: 129 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS- 187
IT +T++N V ++ MV+ + +++L++ G EA +
Sbjct: 159 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 218
Query: 188 ----GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQN 240
GC + V+ ++ C+ G+ +A+ + K E N D V ++ +I G ++
Sbjct: 219 MVEYGCQP--NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 241 GYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFV 299
G ++ A LF EM KGI N T ++ C + K + ++ K N
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI-KRKINPNVVT 335
Query: 300 SSGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLS 355
S ++D + K G +R AE ++ + GI T +SLI G+ + ++ KA ++ D +
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 356 ER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL--GACAIQA 409
+ N + L +GY K+ + + +LFR+ + ++ DT + N L G C +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVADT-VTYNTLIQGFCEL-G 452
Query: 410 TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYN 467
L++ K+ ++ K+ + L+D G A + F+ + S + D+ +YN
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYN 512
Query: 468 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 527
++I G + + A LF + +KP T+ ++ +G + E F M+ED
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 528 YNVLPEIYHYACMVDMY---GRGNQLEKAVEFMRKIPIQIDAT 567
+ P+ + Y ++ + G + K +E +++ +DA+
Sbjct: 573 GHA-PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS 614
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 211/491 (42%), Gaps = 50/491 (10%)
Query: 82 FDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKL 141
F + S R+L + S D A+DLF M +R + I + + + AK
Sbjct: 46 FSAFSDRNLSYRERLRSGLVDIKADD--AIDLFRDMIHSRPLPTV--IDFSRLFSAIAKT 101
Query: 142 R----VVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL-- 195
+ V+ KQM + A++L + LS +I+ + +C R+ FS ++ L
Sbjct: 102 KQYDLVLALCKQME--LKGIAHNL--YTLSIMINCFCRC---RKLCLAFSAMGKIIKLGY 154
Query: 196 ----VSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALT 248
++ + ++ C +G++ AL + + E D ++ NTL+ G +G A+
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 249 LFIEMIEKGIEYNQHTLASVL-----SACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 303
L +M+E G + N T VL S T L ++L + + +K D S I
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL-AMELLRKMEERNIKLDAVK----YSII 269
Query: 304 VDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER-- 357
+D CK G++ A +++ + GI + T + LI G+ + G +L + +R
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 358 --NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 415
N V ++ L +VK + +L +E + PDT+ +++ + L
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEM-IHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 416 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAGY 473
Q ++ + + + + L++ Y K I + F+ ++ D + YN +I G+
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 474 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG----LVELGEKFFMS-MKEDY 528
G N A +LFQEM+ + P+ +T+ LL G +E+ EK S M+ D
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 529 NVLPEIYHYAC 539
+ I H C
Sbjct: 509 GIYNIIIHGMC 519
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/489 (21%), Positives = 207/489 (42%), Gaps = 112/489 (22%)
Query: 60 FSWNAIIMAYIKAHNLTQARALFDSAS----HRDLVSYNSMLSAYAGADGCDTVAL-DLF 114
++++A+I AY ++ +A ++F+S +LV+YN+++ A G G + + F
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFF 327
Query: 115 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 174
MQ R+ + D IT ++L VC S
Sbjct: 328 DEMQ--RNGVQPDRITFNSLL-------AVC----------------------------S 350
Query: 175 KCGSFREAYNVFSGCDGV---VDLVSKNAMVAACCRDGKMDMALNVFWKNPE---FNDTV 228
+ G + A N+F D+ S N ++ A C+ G+MD+A + + P + V
Sbjct: 351 RGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVV 410
Query: 229 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 288
S++T+I G+ + G + AL LF EM GI ++ + ++LS T K+G+ AL
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT-----KVGRSEEALD 465
Query: 289 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKA 347
+ + A +GIK T ++L+ GY +G +
Sbjct: 466 ILRE---------------------------MASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 348 KRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTT---------EALIPD 394
K++F + N + ++ L GY K + ++FREF++ ALI
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI-- 556
Query: 395 TMIIVNVLGACAIQATLSLGKQ-THAYILRTKLNMDEKLASALVDM---YSKCGNIAYAE 450
+ N L A+ + K+ ++ +D SA +D YS G++ ++
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSS 616
Query: 451 KSFQLVTDSDRDVILY---------NVMIAGYAHHGFENKA--IQLFQEMLKISLKPDAI 499
+ +T+++ + ++ N G + + +++F++M ++ +KP+ +
Sbjct: 617 SALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVV 676
Query: 500 TFVALLSAC 508
TF A+L+AC
Sbjct: 677 TFSAILNAC 685
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 162/394 (41%), Gaps = 84/394 (21%)
Query: 199 NAMVAACCRDGKMDMALNVF---WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 255
+AM++ R GK+ +A +F + N +++ LI+ Y ++G E A+++F M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 256 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 315
G+ N T +V+ A C K G + D V + F
Sbjct: 297 YGLRPNLVTYNAVIDA-----CGKGGMEFKQVAKFFDEMQRNGVQPDRITF--------- 342
Query: 316 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALCSGYVK 371
+SL+A S G A+ LFD ++ E++ + L K
Sbjct: 343 ----------------NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 372 SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK 431
Q + F++ A +P I+ NV+ +Y
Sbjct: 387 GGQMDLAFEIL-------AQMPVKRIMPNVV----------------SY----------- 412
Query: 432 LASALVDMYSKCGNIAYAEKSFQ----LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 487
S ++D ++K G A F L DR + YN +++ Y G +A+ + +
Sbjct: 413 --STVIDGFAKAGRFDEALNLFGEMRYLGIALDR--VSYNTLLSIYTKVGRSEEALDILR 468
Query: 488 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRG 547
EM + +K D +T+ ALL +G + +K F MK ++ VLP + Y+ ++D Y +G
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLIDGYSKG 527
Query: 548 NQLEKAVEFMRKIP---IQIDATIWGAFLNA-CK 577
++A+E R+ ++ D ++ A ++A CK
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 43/236 (18%)
Query: 434 SALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAGYAHHGFENKAI-QLFQEML 490
SAL+ Y + G A F + + +++ YN +I G E K + + F EM
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 491 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 550
+ ++PD ITF +LL+ C GL E F M + + +++ Y ++D +G Q+
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT-NRRIEQDVFSYNTLLDAICKGGQM 390
Query: 551 EKAVEFMRKIPIQ-------IDATIWGAFLNACKINN--------------------NTT 583
+ A E + ++P++ +T+ F A + + NT
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 584 L-----VKQAEE--ELLKVEADNGSR-----YVQLANVYAAEGKWNEMGRIRKEMR 627
L V ++EE ++L+ A G + Y L Y +GK++E+ ++ EM+
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 425 KLNMDEKLASALVDMYSKCGNIAYAEKSFQ--LVTDSDRDVILYNVMIAGYAHHGFENKA 482
+ N KLASA++ + G + A++ F+ V ++ +I+ Y G +A
Sbjct: 228 RKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEA 287
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE--KFFMSMKEDYNVLPEIYHYACM 540
I +F M + L+P+ +T+ A++ AC +G +E + KFF M+ + V P+ + +
Sbjct: 288 ISVFNSMKEYGLRPNLVTYNAVIDAC-GKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSL 345
Query: 541 VDMYGRGNQLEKAVEF---MRKIPIQIDATIWGAFLNA-CKINNNTTLVKQAEEELLKVE 596
+ + RG E A M I+ D + L+A CK + + +K
Sbjct: 346 LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 597 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMR 627
N Y + + +A G+++E + EMR
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 188/498 (37%), Gaps = 123/498 (24%)
Query: 189 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMER 245
C ++V+ ++ C+ G+MD A ++F + D ++++TLI GY + G +
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 246 ALTLFIEMIEKGIEYNQHTLASVLSA------------------CTGLK-------CLKL 280
LF + + KG++ + +S + C G+ L
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 281 GKCVHALVLKNDGCSNQFVSSG----------IVDFYCKCGNMRYAESVYAGIGIKSPFA 330
G C + + G Q + G ++D +CKCGN+R ++Y + IK +
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYP 458
Query: 331 T-----SSLIAGYSSKGNMTKAKR----LFDSLSERNYVVWTALCSGYVKSQQCEAVFKL 381
L+ G S +G M A R + N VV+ +L G+ + + + K+
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 382 FR-----------------------EFRTTEALI-----------PDTMIIVNVLGACAI 407
FR E R EAL PD + ++ A
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 408 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVIL 465
++G Q + R K++ D + + ++ + KC I A K F + + + D++
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 466 YNVMIAGY--------AHHGFE---------------------------NKAIQLFQEML 490
YN MI GY A FE + AI++F M
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698
Query: 491 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 550
+ KP+A+T+ L+ +E K F M+E + P I Y+ ++D + ++
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRV 757
Query: 551 EKAVEFMRKIPIQIDATI 568
++A + IDA +
Sbjct: 758 DEATNIFHQ---AIDAKL 772
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 119/576 (20%), Positives = 224/576 (38%), Gaps = 101/576 (17%)
Query: 1 MKSLIVRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR--- 57
+K L V V R + G A ++ T LI+ + G + A LF M R
Sbjct: 259 LKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE 318
Query: 58 -NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALD 112
+ +++ +I Y KA L LF A H+ D+V ++S + Y + T ++
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV- 377
Query: 113 LFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDM 172
++ RM I + +T T ++ + + M+ ++K + S SSLID
Sbjct: 378 VYKRMLC--QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 173 YSKCGSFREAYNVFSG----------------CDGV----------------------VD 194
+ KCG+ R + ++ DG+ ++
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFI 251
+V N+++ CR + D AL VF + D ++ T++ + G +E AL LF
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555
Query: 252 EMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 310
M + G+E + +++ A C +K +G + L+ +N ++ V + ++ KC
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 311 GNMRYAESVYAGI--GIKSP--FATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVW 362
+ A + + G P +++I GY S + +A+R+F+ L N V
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 363 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 422
T L K+ + ++F +I A Y
Sbjct: 675 TILIHVLCKNNDMDGAIRMF-----------------------SIMAEKGSKPNAVTY-- 709
Query: 423 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFEN 480
L+D +SK +I + K F+ + + ++ Y+++I G G +
Sbjct: 710 -----------GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSA-CRHRGLVE 515
+A +F + + L PD + + L+ C+ LVE
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 794
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 162/366 (44%), Gaps = 25/366 (6%)
Query: 228 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHAL 287
V++ LI Y + G + +AL + M E+G+++N T + +++ LK V
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 288 VLKNDGCSNQFVSSGIVDFYCKCGNM-RYAESVYAGIGIKSPFATSS---LIAGYSSKGN 343
++K + + + I+ +C GNM R ++V ++ T + +I GY+ G+
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 344 MTKAKRLFDSLSERNYV----VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 399
M ++ +FD + V + L +G V+ +Q E ++ E T + +
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM-TLAGVSANEHTYT 663
Query: 400 NVLGACAIQATLSLGKQTHAYILRTKL-----NMDEKLASALVDMYSKCGNI--AYAEKS 452
++ Q S+G A+ T+L ++D AL+ K G + A A
Sbjct: 664 KIM-----QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 453 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 512
+ R+ +YN++I G+A G +A L Q+M K +KPD T+ + +SAC G
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 513 LVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV---EFMRKIPIQIDATIW 569
+ + M E V P I Y ++ + R + EKA+ E M+ + I+ D ++
Sbjct: 779 DMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Query: 570 GAFLNA 575
L +
Sbjct: 838 HCLLTS 843
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 112/539 (20%), Positives = 215/539 (39%), Gaps = 74/539 (13%)
Query: 9 ALVVYRDHVQAI-------KSGLASSIFTCNQLIHLYSIHGLLQEAHKLFD--KMPHR-- 57
A V RD +A+ + G+ S+ T + ++ +S G + A FD K H+
Sbjct: 353 AYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL 412
Query: 58 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAG-ADGCDTVALD 112
NA + II A+ + N+ +A AL + Y++M+ Y AD + L
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD--EKKGLV 470
Query: 113 LFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDM 172
+F R++ T + +T ++NL K+ + ++ M + + S +I+
Sbjct: 471 VFKRLKECGFTPTV--VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMING 528
Query: 173 YSKCGSFREAYNVFSGC--DGV-VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFND--- 226
+ K + A+ VF +G+ D++ N +++A C G MD A+ + +
Sbjct: 529 FVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT 588
Query: 227 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 286
T ++ +I GY ++G M R+L +F M G HT +++ ++ ++ K V
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL--VEKRQMEKAVEI 646
Query: 287 L-VLKNDGCS-NQFVSSGIVDFYCKCGNMRYAESVYA-----GIGIKSPFATSSLIAGYS 339
L + G S N+ + I+ Y G+ A + G+ + F +L+
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDI-FTYEALLKACC 705
Query: 340 SKGNMTKAKRLFDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 395
G M A + +S RN V+ L G+ + L ++ + E + PD
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK-EGVKPDI 764
Query: 396 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 455
+ + AC+ ++ QT ++E A +
Sbjct: 765 HTYTSFISACSKAGDMNRATQT----------IEEMEALGV------------------- 795
Query: 456 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLV 514
++ Y +I G+A KA+ ++EM + +KPD + LL++ R +
Sbjct: 796 ----KPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 174/444 (39%), Gaps = 74/444 (16%)
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS---WNTLIAGYVQNGYMERALTL 249
+ LV+ + +V + G + A F + + T++ + +I + Q MERA L
Sbjct: 377 MSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEAL 436
Query: 250 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYC 308
EM E+GI+ +++ T + K G V LK G + V+ G +++ Y
Sbjct: 437 VREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR-LKECGFTPTVVTYGCLINLYT 495
Query: 309 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 368
K G + A V ++ + + + N ++ + +G
Sbjct: 496 KVGKISKALEV---------------------------SRVMKEEGVKHNLKTYSMMING 528
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA-C-------AIQATLSLGKQTHAY 420
+VK + F +F + E + PD ++ N++ A C AIQ + K H
Sbjct: 529 FVKLKDWANAFAVFEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Query: 421 ILRTKLNM--------DEKLASALVDMYSKCGNIAYA----------------EKSFQLV 456
RT + + D + + + DM +CG + EK+ +++
Sbjct: 588 TTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEIL 647
Query: 457 TDSDRDVI-----LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 511
+ + Y ++ GYA G KA + F + L D T+ ALL AC
Sbjct: 648 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 707
Query: 512 GLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR-GNQLEKA--VEFMRKIPIQIDATI 568
G ++ M N+ + Y ++D + R G+ E A ++ M+K ++ D
Sbjct: 708 GRMQSALAVTKEMSA-RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT 766
Query: 569 WGAFLNACKINNNTTLVKQAEEEL 592
+ +F++AC + Q EE+
Sbjct: 767 YTSFISACSKAGDMNRATQTIEEM 790
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 115/565 (20%), Positives = 229/565 (40%), Gaps = 63/565 (11%)
Query: 35 IHLYSIHGLLQEAHKLFDKMPHRNAFSWNAIIMA---YIKAHNLTQARALFDS----ASH 87
+H H LQ K+ N + N +++ Y + +++ AR +FD
Sbjct: 142 LHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVS 201
Query: 88 RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYG 147
++ ++N +++ Y +G AL + RM S + D +T T+L +K +
Sbjct: 202 LNVQTFNVLVNGYC-LEGKLEDALGMLERMVSEFK-VNPDNVTYNTILKAMSKKGRLSDL 259
Query: 148 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNV---FSGCDGVVDLVSKNAMVAA 204
K++ M K ++ ++L+ Y K GS +EA+ + + + DL + N ++
Sbjct: 260 KELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILING 319
Query: 205 CCRDGKMDMALNVF--WKNPEFN-DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYN 261
C G M L + K+ + D V++NTLI G + G A L +M G++ N
Sbjct: 320 LCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKAN 379
Query: 262 QHTLASVLS-ACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVY 320
Q T L C K + + V LV + + ++ Y K G++ A +
Sbjct: 380 QVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439
Query: 321 AGIGIK----SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV----WTALCSGYVKS 372
+G K + ++++ + + +A L +S +R ++V + L G+ +
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE 499
Query: 373 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 432
++ E +++ E + + + P +++G L + DE
Sbjct: 500 EKVEKALEMWDEMKKVK-ITPTVSTFNSLIGGLCHHGKTELAME----------KFDELA 548
Query: 433 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
S L+ D +N +I GY G KA + + E +K
Sbjct: 549 ESGLLP-----------------------DDSTFNSIILGYCKEGRVEKAFEFYNESIKH 585
Query: 493 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 552
S KPD T LL+ G+ E FF ++ E+ V + Y M+ + + +L++
Sbjct: 586 SFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKE 643
Query: 553 AVEFMRKIP---IQIDATIWGAFLN 574
A + + ++ ++ D + +F++
Sbjct: 644 AYDLLSEMEEKGLEPDRFTYNSFIS 668
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 30/268 (11%)
Query: 23 GLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAHNLTQA 78
G + I T + LI Y G L A ++ +M + N + N I+ A K L +A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 79 RALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 134
L +SA R D V+Y +++ + + + AL+++ M+ + T T++T
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK-ALEMWDEMKKVKITP-----TVSTF 524
Query: 135 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL-------SSLIDMYSKCGSFREAYNVFS 187
+L L C+ + M K ++L++ L +S+I Y K G +A+ ++
Sbjct: 525 NSLIGGL---CHHGKTELAMEK-FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Query: 188 GC---DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN--DTVSWNTLIAGYVQNGY 242
D + N ++ C++G + ALN F E DTV++NT+I+ + ++
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKK 640
Query: 243 MERALTLFIEMIEKGIEYNQHTLASVLS 270
++ A L EM EKG+E ++ T S +S
Sbjct: 641 LKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 191/434 (44%), Gaps = 44/434 (10%)
Query: 170 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---- 225
+ +Y + SF + +VF+ C VV+ A CR G +D A+ VF K E +
Sbjct: 210 LHVYDQMISFEVSPDVFT-CSIVVN---------AYCRSGNVDKAM-VFAKETESSLGLE 258
Query: 226 -DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCV 284
+ V++N+LI GY G +E + M E+G+ N T S++ ++ + V
Sbjct: 259 LNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHV 318
Query: 285 HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAG---IGIKSPFAT-SSLIAGYSS 340
L+ + ++Q + ++D YC+ G +R A V+ IG+++ +SLI GY
Sbjct: 319 FELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCK 378
Query: 341 KGNMTKAKRLFDSLSE----RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTM 396
G + +A+++F +++ ++ + L GY ++ + KL + E ++P T+
Sbjct: 379 SGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE-VVP-TV 436
Query: 397 IIVNVL--GACAIQA---TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 451
+ N+L G I A LSL K +L+ +N DE S L++ K G+ A K
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKM----MLKRGVNADEISCSTLLEALFKLGDFNEAMK 492
Query: 452 SFQLVTDSD--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACR 509
++ V D I NVMI+G N+A ++ + KP T+ AL
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYY 552
Query: 510 HRGLVELGEKFFM-SMKEDYNVLPEIYHYACMVD---MYGRGNQLEKAVEFMRKIPIQID 565
G L E F + E + P I Y ++ Y N++ V +R +
Sbjct: 553 KVG--NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 610
Query: 566 ATIWGAFLNA-CKI 578
+GA + C I
Sbjct: 611 VATYGALITGWCNI 624
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 143/656 (21%), Positives = 254/656 (38%), Gaps = 128/656 (19%)
Query: 23 GLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMPHR----NAFSWNAIIMAYIKAHNLTQA 78
GL ++ T N LI+ Y++ G ++ ++ M R N ++ ++I Y K + +A
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 79 RALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLS 138
+F+ + LV+ M V +D + R RD +
Sbjct: 316 EHVFELLKEKKLVADQHMYG----------VLMDGYCRTGQIRDAV-------------- 351
Query: 139 AKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG---VVDL 195
++H M++ + +SLI+ Y K G EA +FS + D
Sbjct: 352 ----------RVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 401
Query: 196 VSKNAMVAACCRDGKMDMALNVFWK--NPEFNDTV-SWNTLIAGYVQNGYMERALTLFIE 252
+ N +V CR G +D AL + + E TV ++N L+ GY + G L+L+
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM 461
Query: 253 MIEKGIEYNQHTLASVLSACTGL----KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 308
M+++G+ ++ + +++L A L + +KL + V A L D + + SG+ C
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL----C 517
Query: 309 KCGNMRYAESVYAGIGI---KSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERNYV---- 360
K + A+ + + I K T +L GY GN+ +A + + + +
Sbjct: 518 KMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 577
Query: 361 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 420
++ L SG K + V L E R L P V GA I ++G AY
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELR-ARGLTP----TVATYGAL-ITGWCNIGMIDKAY 631
Query: 421 ILRTKLNMDEKLASALVDMYSKCGN-------IAYAEKSFQLVTDSD------------- 460
T M EK + V++ SK N I A Q + D D
Sbjct: 632 A--TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFL 689
Query: 461 ---------------------------RDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
+ I+YNV IAG G A +LF ++L
Sbjct: 690 EASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSD 749
Query: 494 -LKPDAITFVALLSACRHRGLVELGEKFF----MSMKEDYNVLPEIYHYACMVDMYGRGN 548
PD T+ L+ C G ++ + F M++K ++P I Y ++ +
Sbjct: 750 RFIPDEYTYTILIHGCAIAG--DINKAFTLRDEMALK---GIIPNIVTYNALIKGLCKLG 804
Query: 549 QLEKAVEFMRKIP---IQIDATIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 601
+++A + K+P I +A + ++ + N + +E++++ GS
Sbjct: 805 NVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGS 860
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 115/561 (20%), Positives = 221/561 (39%), Gaps = 123/561 (21%)
Query: 6 VRDALVVYRDHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP----HRNAFS 61
+RDA+ R H I+ G+ ++ CN LI+ Y G L EA ++F +M + +
Sbjct: 347 IRDAV---RVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403
Query: 62 WNAIIMAYIKAHNLTQARALFDSASHRDLV----SYNSMLSAYAGADGCDTVALDLFARM 117
+N ++ Y +A + +A L D +++V +YN +L Y+ R+
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS--------------RI 449
Query: 118 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 177
+ D + + ++ M+K + + + S+L++ K G
Sbjct: 450 GAFHDVLSLWKM------------------------MLKRGVNADEISCSTLLEALFKLG 485
Query: 178 SFREAYNVFSGCDG---VVDLVSKNAMVAACCRDGKMDMA------LNVFWKNPEFNDTV 228
F EA ++ + D ++ N M++ C+ K++ A +N+F P
Sbjct: 486 DFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQ--- 542
Query: 229 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 288
++ L GY + G ++ A + M KGI +++S K L K ++
Sbjct: 543 TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG--AFKYRHLNKVADLVI 600
Query: 289 -LKNDGCSNQFVSSG-IVDFYCKCGNMRYA-----ESVYAGI----GIKSPFATSS---- 333
L+ G + + G ++ +C G + A E + GI I S A S
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660
Query: 334 -----------------LIAGY--------SSKGNMTKAKRLFDSLSER--------NYV 360
L+ GY +S K +++ +S+ N +
Sbjct: 661 KIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNI 720
Query: 361 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 420
V+ +G K+ + E KLF + +++ IPD ++ CAI G A+
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIA-----GDINKAF 775
Query: 421 ILRTKLNMDEKLA-----SALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGY 473
LR ++ + + +AL+ K GN+ A++ + + I YN +I G
Sbjct: 776 TLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835
Query: 474 AHHGFENKAIQLFQEMLKISL 494
G +A++L ++M++ L
Sbjct: 836 VKSGNVAEAMRLKEKMIEKGL 856
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 53/285 (18%)
Query: 237 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 296
V+ G AL ++ +MI + +
Sbjct: 200 LVRKGENFVALHVYDQMISFEVS-----------------------------------PD 224
Query: 297 QFVSSGIVDFYCKCGN----MRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLF 351
F S +V+ YC+ GN M +A+ + +G++ T +SLI GY+ G++ R+
Sbjct: 225 VFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVL 284
Query: 352 DSLSE----RNYVVWTALCSGYVKS---QQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 404
+SE RN V +T+L GY K ++ E VF+L +E + L+ D + ++
Sbjct: 285 RLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE----KKLVADQHMYGVLMDG 340
Query: 405 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD--SDRD 462
+ + H ++ + + + ++L++ Y K G + AE+ F + D D
Sbjct: 341 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 463 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 507
YN ++ GY G+ ++A++L +M + + P +T+ LL
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 204/491 (41%), Gaps = 50/491 (10%)
Query: 82 FDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKL 141
F + S R+L + + S G D A+DLF M +R + I + + AK
Sbjct: 46 FSTFSDRNLSYRDKLSSGLVGIKADD--AVDLFRDMIQSRPLPTV--IDFNRLFSAIAKT 101
Query: 142 R----VVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV---VD 194
+ V+ KQM S + S + LS +I+ + +C A++ + D
Sbjct: 102 KQYELVLALCKQMESKGIAH----SIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPD 157
Query: 195 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDT---VSWNTLIAGYVQNGYMERALTLFI 251
V N ++ C + ++ AL + + E ++ NTL+ G NG + A+ L
Sbjct: 158 TVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLID 217
Query: 252 EMIEKGIEYNQHTLASVL-----SACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 306
M+E G + N+ T VL S T L ++L + + +K D S I+D
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTAL-AMELLRKMEERNIKLDAVK----YSIIIDG 272
Query: 307 YCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER----N 358
CK G++ A +++ + G K+ T ++LI G+ + G +L + +R N
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 359 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 418
V ++ L +VK + +L +E + P+T+ +++ + L Q
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEM-MQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 419 AYILRTKLNMDEKLASALVDMYSKCGNI-----AYAEKSFQLVTDSDRDVILYNVMIAGY 473
++ + D + L++ Y K I + E S + V + + YN ++ G+
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI---ANTVTYNTLVQGF 448
Query: 474 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-----MSMKEDY 528
G A +LFQEM+ ++PD +++ LL G +E + F M+ D
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 529 NVLPEIYHYAC 539
+ I H C
Sbjct: 509 GIYMIIIHGMC 519
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 141/331 (42%), Gaps = 20/331 (6%)
Query: 193 VDLVSKNAMVAACCRDGKMDMALNVF--WKNPEFN-DTVSWNTLIAGYVQNGYMERALTL 249
+D V + ++ C+DG +D A N+F + F D +++NTLI G+ G + L
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 250 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 309
+MI++ I N T + ++ + L+ + +++ N + ++D +CK
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 310 CGNMRYA---ESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER----NYVV 361
+ A + G T + LI GY + LF +S R N V
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 362 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 421
+ L G+ +S + E KLF+E + + PD + +L L + I
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEM-VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 422 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL-----VTDSDRDVILYNVMIAGYAHH 476
++K+ +D + ++ ++ C N + + ++ L + D YN+MI+
Sbjct: 500 EKSKMELD--IGIYMIIIHGMC-NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556
Query: 477 GFENKAIQLFQEMLKISLKPDAITFVALLSA 507
+KA LF++M + PD +T+ L+ A
Sbjct: 557 DSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 103/514 (20%), Positives = 214/514 (41%), Gaps = 42/514 (8%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP----HRNAFSWNAIIMAYIKAH 73
Q G+A SI+T + +I+ + L A K+ + +N ++
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 74 NLTQARALFD---SASHRD-LVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 129
+++A L D H+ L++ N++++ +G + A+ L RM +E+
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLC-LNGKVSDAVVLIDRM--VETGFQPNEV 229
Query: 130 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 189
T +LN+ K ++ M + L S +ID K GS A+N+F+
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 190 D--GV-VDLVSKNAMVAACCRDGKMDMA---LNVFWKNPEFNDTVSWNTLIAGYVQNGYM 243
+ G D+++ N ++ C G+ D L K + V+++ LI +V+ G +
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 244 ERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 302
A L EM+++GI N T S++ C + + + V ++ K GC ++
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK--GCDPDIMTFN 407
Query: 303 I-VDFYCKCGNMRYAESVYAGIGIKSPFATS----SLIAGYSSKGNMTKAKRLFDSLSER 357
I ++ YCK + ++ + ++ A + +L+ G+ G + AK+LF + R
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 358 ----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 413
+ V + L G + + E ++F + ++ + + ++ + G C +
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC------NA 521
Query: 414 GKQTHAYILRTKL-----NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR--DVILY 466
K A+ L L +D + + ++ + +++ A+ F+ +T+ D + Y
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 467 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 500
N++I + A +L +EM D T
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVST 615
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/437 (19%), Positives = 168/437 (38%), Gaps = 60/437 (13%)
Query: 208 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 267
D +D+ ++ P + +N L + + E L L +M KGI ++ +TL S
Sbjct: 70 DDAVDLFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL-S 127
Query: 268 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI---G 324
++ C +C+C + YA S I G
Sbjct: 128 IMINC----------------------------------FCRCRKLSYAFSTMGKIMKLG 153
Query: 325 IKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERNY----VVWTALCSGY-VKSQQCEAV 378
+ ++L+ G + +++A L D + E + + L +G + + +AV
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 379 FKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVD 438
+ R T P+ + VL +L + + + +D S ++D
Sbjct: 214 VLIDRMVET--GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 439 MYSKCGNIAYAEKSFQLVTDSD-----RDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 493
K G++ + +F L + + D+I YN +I G+ + G + +L ++M+K
Sbjct: 272 GLCKDGSL---DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 494 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 553
+ P+ +TF L+ + G + ++ M + + P Y ++D + + N+LE+A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ-RGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 554 ---VEFMRKIPIQIDATIWGAFLNA-CKINNNTTLVKQAEEELLKVEADNGSRYVQLANV 609
V+ M D + +N CK N ++ E L+ N Y L
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 610 YAAEGKWNEMGRIRKEM 626
+ GK ++ +EM
Sbjct: 448 FCQSGKLEVAKKLFQEM 464
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 123/292 (42%), Gaps = 37/292 (12%)
Query: 209 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI---EKG-IEYNQHT 264
G++D+ +F + P D SW + G ++ G E A LF+ M+ +KG +
Sbjct: 137 GRLDITRQMFDRMPH-RDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWI 195
Query: 265 LASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIG 324
L VL AC ++ +LGK VHAL K G +D
Sbjct: 196 LGCVLKACAMIRDFELGKQVHALCHK----------LGFID------------------- 226
Query: 325 IKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE 384
+ + + SLI Y + A + LS N V W A + + + + V + F E
Sbjct: 227 EEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIE 286
Query: 385 FRTTEALIPDTMIIVNVLGACA-IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 443
+ + + NVL AC+ + G+Q HA ++ D + L++MY K
Sbjct: 287 M-GNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKY 345
Query: 444 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 495
G + AEK F+ D + V +N M+A Y +G +AI+L +M +K
Sbjct: 346 GKVKDAEKVFKSSKD-ETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIK 396
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 122/559 (21%), Positives = 227/559 (40%), Gaps = 86/559 (15%)
Query: 15 DHVQAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFD------KMPHRNAFSWNAIIMA 68
+ V+ SGL ++ C +L HG L EA + D +MP + ++
Sbjct: 190 EQVKERGSGLW--LWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNL-YKSLFYC 246
Query: 69 YIKAHNLTQARALFD----SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 124
+ K +A ALFD + D V Y ++ Y D T+A+ L+ RM +
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYC-KDNNMTMAMRLYLRM--VERSF 303
Query: 125 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 184
+D T+++ KL ++ G+ M S M+K N
Sbjct: 304 ELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQ----------------------SN 341
Query: 185 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS----WNTLIAGYVQN 240
VF+ + M+ + C++G +D AL +F N D + LI G+ +
Sbjct: 342 VFT----------YHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKK 391
Query: 241 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-NQFV 299
G M++A+ L + M++ GI + T +L LK + +L N GC N V
Sbjct: 392 GGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDN-GCGINPPV 450
Query: 300 SSGIVDFYCKC----GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 355
+ + K G + ++ A +G+ T++L + + +++ +++ +
Sbjct: 451 IDDLGNIEVKVESLLGEIARKDANLAAVGLA--VVTTALCSQRNYIAALSRIEKMVNLGC 508
Query: 356 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT---MIIVNVL--------GA 404
+ ++ + E + L + + +PD +I+VN L
Sbjct: 509 TPLPFSYNSVIKCLFQENIIEDLASLVNIIQELD-FVPDVDTYLIVVNELCKKNDRDAAF 567
Query: 405 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRD 462
I A LG + I S+++ K G + AE++F + +S D
Sbjct: 568 AIIDAMEELGLRPTVAIY-----------SSIIGSLGKQGRVVEAEETFAKMLESGIQPD 616
Query: 463 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFM 522
I Y +MI YA +G ++A +L +E++K L+P + T+ L+S G++E G ++
Sbjct: 617 EIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLD 676
Query: 523 SMKEDYNVLPEIYHYACMV 541
M ED + P + Y ++
Sbjct: 677 KMLED-GLSPNVVLYTALI 694
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/440 (19%), Positives = 169/440 (38%), Gaps = 85/440 (19%)
Query: 168 SLIDMYSKCGSFREAYNVFS--GCDGV-VDLVSKNAMVAACCRDGKMDMALNVFWKNPEF 224
SL + K G EA +F DG VD V ++ C+D M MA+ ++ + E
Sbjct: 242 SLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVER 301
Query: 225 N---DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG 281
+ D +NTLI G+++ G +++ +F +MI+KG++
Sbjct: 302 SFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQ---------------------- 339
Query: 282 KCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-----SSLIA 336
SN F ++ YCK GN+ YA ++ + ++LI
Sbjct: 340 -------------SNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 337 GYSSKGNMTKA----KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALI 392
G+ KG M KA R+ D+ +++ + L K + + + + I
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGI 446
Query: 393 PDTMIIVNVLGACAIQATLSLGKQTHA---------YILRTKLNMDEKLASALVDMYS-- 441
+++ LG ++ LG+ ++ T L +AL +
Sbjct: 447 NPP--VIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMV 504
Query: 442 --KCGNIAYAEKS-----FQ------------LVTDSD--RDVILYNVMIAGYAHHGFEN 480
C + ++ S FQ ++ + D DV Y +++ +
Sbjct: 505 NLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRD 564
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 540
A + M ++ L+P + +++ + +G V E+ F M E + P+ Y M
Sbjct: 565 AAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLES-GIQPDEIAYMIM 623
Query: 541 VDMYGRGNQLEKAVEFMRKI 560
++ Y R ++++A E + ++
Sbjct: 624 INTYARNGRIDEANELVEEV 643
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 213/523 (40%), Gaps = 65/523 (12%)
Query: 93 YNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHS 152
YN++L++ A D + M+ D + + T M+N KL V Q S
Sbjct: 186 YNTLLNSLARFGLVDEMKQ---VYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 153 YMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS-----GCDGVVDLVSKNAMVAACCR 207
+V+ D F +SLI Y + A+ VF+ GC + V+ ++ C
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR--NEVAYTHLIHGLCV 300
Query: 208 DGKMDMALNVFWKNPE---FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHT 264
++D A+++F K + F ++ LI + AL L EM E GI+ N HT
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 265 LASVL-SACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 323
++ S C+ K K + + + L+ N + +++ YCK G + A V +
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQM-LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 324 GIK--SPFATS--SLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQC 375
+ SP + LI GY K N+ KA + + + ER + V + +L G +S
Sbjct: 420 ESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 376 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 435
++ ++L L+PD +++ + + + + +N + + +A
Sbjct: 479 DSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 436 LVDMYSKCGNIAYAEKSFQ--LVTDSDRDVILYNVMIAGYAHHG-------FENKAIQL- 485
L+D Y K G + A + L + + + +N +I G G E K +++
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 486 ---------------------------FQEMLKISLKPDAITFVALLSA-CRHRGLVELG 517
FQ+ML KPDA T+ + CR L++
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD-A 656
Query: 518 EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 560
E M+E+ V P+++ Y+ ++ YG Q A + ++++
Sbjct: 657 EDMMAKMREN-GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 110/270 (40%), Gaps = 43/270 (15%)
Query: 334 LIAGYSSKGNMTKAKRLFDSLSE----RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTE 389
LI Y GN A+R+ LS+ N + +TAL Y + +C +FR +++
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS- 203
Query: 390 ALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL---RTKLNMDEKLASALVDMYSKCGNI 446
P + +L ++ +L ++ L D+K+ ++ MY K GN
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 447 AYAEKSFQLV----------------------------------TDSDRDVILYNVMIAG 472
A K F + +D DV+ Y ++I
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKA 323
Query: 473 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 532
Y E +A+ +F+EML ++P + LL A G+VE + F SM+ D + P
Sbjct: 324 YGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFP 382
Query: 533 EIYHYACMVDMYGRGNQLEKAVEFMRKIPI 562
+++ Y M+ Y + +E A +F ++I +
Sbjct: 383 DLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 170/406 (41%), Gaps = 69/406 (16%)
Query: 164 FALSSLIDMYSKCGSFREAYNVF-SGCDG---VVDLVSKNAMVAACCRDGKMDMALNVF- 218
F S++I + K G A F S D V +LV+ +V+A C+ GK+D ++
Sbjct: 172 FVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVR 231
Query: 219 ----------------WKNPEFN---------------------DTVSWNTLIAGYVQNG 241
W + F D VS++ LI G + G
Sbjct: 232 RLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEG 291
Query: 242 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-----N 296
+E AL L +MI++G+E N T +++ K+GK A VL N S +
Sbjct: 292 NVEEALGLLGKMIKEGVEPNLITYTAIIRGLC-----KMGKLEEAFVLFNRILSVGIEVD 346
Query: 297 QFVSSGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFD 352
+F+ ++D C+ GN+ A S+ + GI+ T +++I G G +++A +
Sbjct: 347 EFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK 406
Query: 353 SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 412
+ + + ++ L Y+K Q +AV ++ R F EA IP +++ N+L ++A L
Sbjct: 407 GVV-GDVITYSTLLDSYIKVQNIDAVLEIRRRF--LEAKIPMDLVMCNIL----LKAFLL 459
Query: 413 LGKQTHAYIL-----RTKLNMDEKLASALVDMYSKCGNIAYAEKSF-QLVTDSDRDVILY 466
+G A L L D + ++ Y K G I A + F +L S + Y
Sbjct: 460 MGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCY 519
Query: 467 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 512
N +I G + A ++ E+ + L D T LL + G
Sbjct: 520 NRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG 565
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 109/568 (19%), Positives = 231/568 (40%), Gaps = 38/568 (6%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKM----PHRNAFSWNAIIMAYIKAH 73
+ IK G+ ++ T +I G L+EA LF+++ + F + +I +
Sbjct: 302 KMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKG 361
Query: 74 NLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 129
NL +A ++ R +++YN++++ A + ++ +G D I
Sbjct: 362 NLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEAD-------EVSKGVVG-DVI 413
Query: 130 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA---YNVF 186
T +T+L+ K++ + ++ ++ + + L+ + G++ EA Y
Sbjct: 414 TYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAM 473
Query: 187 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVF--WKNPEFNDTVSWNTLIAGYVQNGYME 244
D D + M+ C+ G+++ AL +F + + V +N +I + G ++
Sbjct: 474 PEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLD 533
Query: 245 RALTLFIEMIEKGIEYNQHTLASVLS---ACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 301
A + IE+ EKG+ + HT ++L A G K + LG L +D C +
Sbjct: 534 TATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGI-LGLVYGLEQLNSDVCLGMLNDA 592
Query: 302 GIVDFYCKCGNMRYAESVYAGI---GIKSPFATSSLIAGYSSKGNMTKAKRLFD----SL 354
+ CK G+ A VY + G+ F ++ L + ++ + + +L
Sbjct: 593 --ILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTL 650
Query: 355 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 414
S + + +T + +G K L F + + +T+ +++ Q L
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLC-SFAKSRGVTLNTITYNSLINGLCQQGCLVEA 709
Query: 415 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAG 472
+ + L E L+D K G AEK + ++I+YN ++ G
Sbjct: 710 LRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDG 769
Query: 473 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 532
Y G A+++ + + PDA T +++ +G +E F K D N+
Sbjct: 770 YCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFK-DKNISA 828
Query: 533 EIYHYACMVDMYGRGNQLEKAVEFMRKI 560
+ + + ++ + ++E+A +R++
Sbjct: 829 DFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 30/270 (11%)
Query: 326 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY------VVWTALCSGYVKSQQCEAVF 379
S SLI + KG M A + + ++ +N V +A+ SG+ K + E
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 380 KLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN-----MDEKLAS 434
F + L+P+ + + + A LGK L +L D S
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTL-----VSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYS 246
Query: 435 ALVDMYSKCGNI--AYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 492
+ Y K G + A + + +RDV+ Y+++I G + G +A+ L +M+K
Sbjct: 247 NWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKE 306
Query: 493 SLKPDAITFVALLSACRHRGLVELG--EKFFMSMKEDYNVLPEI--YHYACMVDMYGRGN 548
++P+ IT+ A++ RGL ++G E+ F+ +V E+ + Y ++D R
Sbjct: 307 GVEPNLITYTAII-----RGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKG 361
Query: 549 QLEKAVEF---MRKIPIQIDATIWGAFLNA 575
L +A M + IQ + +N
Sbjct: 362 NLNRAFSMLGDMEQRGIQPSILTYNTVING 391
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 158/371 (42%), Gaps = 53/371 (14%)
Query: 199 NAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQ---NGYMERALTLFIE 252
N ++ A C+ GKM+ A +V + + VS+NTLI GY + NG M +A + E
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 253 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 312
M+E + N T ++ K+D G+
Sbjct: 287 MVENDVSPNLTTFNILIDG----------------FWKDDNLP---------------GS 315
Query: 313 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALCSG 368
M+ + + + + +SLI G + G +++A + D + + N + + AL +G
Sbjct: 316 MKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALING 375
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 428
+ K+ + +F + A +P T + N+L I A LGK + L+ ++
Sbjct: 376 FCKNDMLKEALDMFGSVKGQGA-VPTTRM-YNML----IDAYCKLGKIDDGFALKEEMER 429
Query: 429 -----DEKLASALVDMYSKCGNIAYAEKSF-QLVTDSDRDVILYNVMIAGYAHHGFENKA 482
D + L+ + GNI A+K F QL + D++ +++++ GY G KA
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKA 489
Query: 483 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 542
L +EM K+ LKP +T+ ++ G ++ M+++ + + Y ++
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 543 MYGRGNQLEKA 553
Y + +LE A
Sbjct: 550 GYSQKGKLEDA 560
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 169/394 (42%), Gaps = 48/394 (12%)
Query: 154 MVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS-----GCDGVVDLVSKNAMVAACCR- 207
M++ + F + +I+ K G +A +V GC ++VS N ++ C+
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP--NVVSYNTLIDGYCKL 271
Query: 208 --DGKM---DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQ 262
+GKM D L +N + ++N LI G+ ++ + ++ +F EM+++ ++ N
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 263 HTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCS-----NQFVSSGIVDFYCKCGNMRYA 316
+ S+++ C G GK A+ +++ S N + +++ +CK ++ A
Sbjct: 332 ISYNSLINGLCNG------GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 317 ESVYAGIGIKSPFATSS----LIAGYSSKGNMTKAKRLFDSLSERNYV----VWTALCSG 368
++ + + T+ LI Y G + L + + V + L +G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 369 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL---RTK 425
++ EA KLF + T +PD ++ ++L ++ G+ A +L +K
Sbjct: 446 LCRNGNIEAAKKLFDQL--TSKGLPD-LVTFHIL----MEGYCRKGESRKAAMLLKEMSK 498
Query: 426 LNMDEKLASALVDM--YSKCGNIAYAEKSFQLVTDSDR---DVILYNVMIAGYAHHGFEN 480
+ + + + + M Y K GN+ A + R +V YNV++ GY+ G
Sbjct: 499 MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558
Query: 481 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLV 514
A L EML+ L P+ IT+ + +G V
Sbjct: 559 DANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 23/264 (8%)
Query: 18 QAIKSGLASSIFTCNQLIHLYSIHGLLQEAHKLFDKMP----HRNAFSWNAIIMAYIKAH 73
+ + + ++ + N LI+ G + EA + DKM N ++NA+I + K
Sbjct: 321 EMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
Query: 74 NLTQARALFDSASHRDLVS----YNSMLSAYAGADGCDTVALDLFA-RMQSARDTIGMDE 128
L +A +F S + V YN ++ AY D D FA + + R+ I D
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID----DGFALKEEMEREGIVPDV 436
Query: 129 ITLTTML-NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS 187
T ++ L + K K DL F + L++ Y + G R+A +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHI--LMEGYCRKGESRKAAMLLK 494
Query: 188 GCDGV---VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN----DTVSWNTLIAGYVQN 240
+ ++ N ++ C++G + A N+ + + + S+N L+ GY Q
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554
Query: 241 GYMERALTLFIEMIEKGIEYNQHT 264
G +E A L EM+EKG+ N+ T
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRIT 578