Miyakogusa Predicted Gene
- Lj3g3v3337990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3337990.1 Non Chatacterized Hit- tr|F6HA22|F6HA22_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.77,8e-19,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; PPR,Pentatricopeptide repeat;
PPR_2,P,NODE_57246_length_1217_cov_19.037798.path1.1
(307 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 244 5e-65
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 113 2e-25
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 3e-24
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 3e-24
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 107 1e-23
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 8e-23
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 9e-23
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 3e-21
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 3e-21
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 97 1e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 96 3e-20
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 3e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 5e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 5e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 9e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 2e-18
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 2e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 3e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 5e-18
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 7e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 7e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 8e-18
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 87 1e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 3e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 3e-17
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 5e-17
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 9e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 6e-16
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 7e-16
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 7e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 81 7e-16
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 8e-16
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 8e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 9e-16
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 7e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 78 1e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 77 1e-14
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 4e-14
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 4e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 6e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 2e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 73 3e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 4e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 7e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 70 1e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 70 3e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 69 4e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 69 4e-12
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 7e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 65 8e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 9e-11
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 2e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 62 4e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 62 4e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 5e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 9e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 4e-08
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 54 1e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 54 2e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 54 2e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 53 2e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 52 4e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 51 8e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 50 1e-06
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 50 1e-06
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 9e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-05
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 48 1e-05
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 244 bits (623), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 194/329 (58%), Gaps = 39/329 (11%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RGL P+E TY++L ++ + G ++ + +M NG SPS+V
Sbjct: 371 MRVRGLCPNERTYTTL-------VDGFSQKGYMNEAYRVLREMNDNGF-------SPSVV 416
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYNALI G+C G++E+A+ +L M E GLSPD VSY+ V+SGFCR + +A +K EM
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 121 DEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGD 158
EK I + + + Y SL+QG DE Y++L+N Y +GD
Sbjct: 477 VEKGI-KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+EKA L E+ G L + VT SV INGL+K++RTREAK +LL + S + TY
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE--SVPSDVTY 593
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
LIENCSN EFKS+V L+KGF M+G+++EA + ++ML NHKPDG YN +I HCR
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 279 KNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++ KAY +Y MV GF+ H +V+AL+
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 151/351 (43%), Gaps = 63/351 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML +SP+ TY+ L I +C G L D+M G LP+ +V
Sbjct: 196 MLESQVSPNVFTYNIL-------IRGFCFAGNIDVALTLFDKMETKGCLPN-------VV 241
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI GYC L ++++ +LR M GL P+ +SYN+VI+G CR G+ E+ +
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR---EGRMKEVSFVL 298
Query: 121 DE--KRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQ 156
E +R ++EV Y +L++G E Y+SL++
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
G+M +A ++ G T + ++G S+K EA +L M N +
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG--FSPSVV 416
Query: 217 TYDALIE-NCSNNEFKSLVELVKGFRMRGL-------------------VSEAARAHDTM 256
TY+ALI +C + + + +++ + +GL V EA R M
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ KPD Y+ LI C + +A ++Y M+ G P F+ ALI
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML GL PDE TY++L INAYC+ G+ K LH++M+ GVLPD +V
Sbjct: 511 MLRVGLPPDEFTYTAL-------INAYCMEGDLEKALQLHNEMVEKGVLPD-------VV 556
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY+ LI G R EA +L + P V+Y+ +I C E L
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIKGF 615
Query: 121 DEKRILRMEEVVYESLM--QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
K ++ + V+ES++ D AY+ +++ + GD+ KAY L +E+ G+L +
Sbjct: 616 CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHT 675
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
VT + L K+ + E +++ ++ + LS+
Sbjct: 676 VTVIALVKALHKEGKVNELNSVIVHVLRSCELSE 709
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 104/253 (41%), Gaps = 34/253 (13%)
Query: 57 PSLVTYNALIYGYCFLGR-VEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
P +++YNA++ R + A + + M E +SP+ +YNI+I GFC A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L +M+ K L VV Y++L++ Y ++ + L R +A G
Sbjct: 227 LFDKMETKGCL--PNVV------------TYNTLIDGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNS-CLSKTTHTTYDALIENCSNNEFKSLV 234
++ +V INGL ++ R +E +L M L + T+ T
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT----------------- 315
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
L+KG+ G +A H ML P Y LI C+ N+++A +M
Sbjct: 316 -LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 295 GFVPHMFSVLALI 307
G P+ + L+
Sbjct: 375 GLCPNERTYTTLV 387
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 147/325 (45%), Gaps = 54/325 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD+ T+++L +N C G + D M+ G PD + TYN+
Sbjct: 290 GFFPDQYTFNTL-------VNGLCKAGHVKHAIEIMDVMLQEGYDPD-------VYTYNS 335
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
+I G C LG V+EA+ +L M SP+ V+YN +IS C+ + +A EL + K
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 125 ILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGDMEKA 162
IL + + SL+QGL DE Y+ L++ ++G +++A
Sbjct: 396 ILP-DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
+ +++ G +T + I+G K +TREA+EI M + +S+ + TY+ LI
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG-VSRNS-VTYNTLI 512
Query: 223 ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
+ L K R V +AA+ D M+ KPD YN L+ CR ++
Sbjct: 513 DG-----------LCKSRR----VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 283 KAYNMYTRMVHYGFVPHMFSVLALI 307
KA ++ M G P + + LI
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 136/310 (43%), Gaps = 51/310 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G PDE TY+ L I++ C G+ + N+ QM +G + S++
Sbjct: 426 MRSKGCEPDEFTYNML-------IDSLCSKGKLDEALNMLKQMELSGC-------ARSVI 471
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI G+C + EA I M G+S ++V+YN +I G C+ R A +L +M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+M+G D+ Y+SL+ + GD++KA + + + +G + V
Sbjct: 532 ---------------IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T I+GL K R A ++L S I ++ T H Y+ +I+
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRS-IQMKGINLTPH-AYNPVIQGL-------------- 620
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN---VDKAYNMYTRMVHYGF 296
FR R +EA ML N P V ++ IV C + +A + ++ GF
Sbjct: 621 FRKRK-TTEAINLFREMLEQNEAPPDAV-SYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
Query: 297 VPHMFSVLAL 306
VP S+ L
Sbjct: 679 VPEFSSLYML 688
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 128/311 (41%), Gaps = 52/311 (16%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
+W G+ PD T++ L I A C + + + M G++PD T
Sbjct: 182 VW-GIKPDVSTFNVL-------IKALCRAHQLRPAILMLEDMPSYGLVPD-------EKT 226
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
+ ++ GY G ++ AL I M E G S VS N+++ GFC+ A EM
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 122 EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
+ D+ +++L+N G ++ A + + +GY + T
Sbjct: 287 NQDGF-------------FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTY 333
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGF 240
+ I+GL K +EA E+L MI+ C T TY+ LI C N+ + EL +
Sbjct: 334 NSVISGLCKLGEVKEAVEVLDQMITRDCSPNT--VTYNTLISTLCKENQVEEATELARVL 391
Query: 241 RMRGLVSEAARAHDTMLHG-----NHK---------------PDGGVYNFLIVEHCRCKN 280
+G++ + ++++ G NH+ PD YN LI C
Sbjct: 392 TSKGILPDVC-TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 281 VDKAYNMYTRM 291
+D+A NM +M
Sbjct: 451 LDEALNMLKQM 461
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD+ TY+SL + +C GG+ K +++ M NG PD +V
Sbjct: 531 MIMEGQKPDKYTYNSL-------LTHFCRGGDIKKAADIVQAMTSNGCEPD-------IV 576
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G C GRVE A +LR + G++ +YN VI G R R+ +A L EM
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDRE---IAHDGYLSE 177
E+ + V Y + +GL + D+L + +EK ++ + + +G L+
Sbjct: 637 LEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVEL-LEKGFVPEFSSLYMLAEGLLTL 695
Query: 178 SVTESV--FINGLSKKARTRE 196
S+ E++ +N + +KAR E
Sbjct: 696 SMEETLVKLVNMVMQKARFSE 716
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 35/243 (14%)
Query: 85 MPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED 144
M G+ PD ++N++I CR A++L+ IL +E++ L + DE
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCR------AHQLR-----PAILMLEDMPSYGL---VPDEK 225
Query: 145 AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
++++M Y+ +GD++ A + ++ G +V+ +V ++G K+ R +A + M
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 205 ISNSCLSKTTHTTYDALIEN-CSNNEFKSLVEL-------------------VKGFRMRG 244
SN T++ L+ C K +E+ + G G
Sbjct: 286 -SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
V EA D M+ + P+ YN LI C+ V++A + + G +P + +
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 305 ALI 307
+LI
Sbjct: 405 SLI 407
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 143/327 (43%), Gaps = 53/327 (16%)
Query: 3 WR-GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
W+ G PD T+S+L +N +CL G S+ L D+M+ PD LVT
Sbjct: 132 WKLGYEPDTITFSTL-------VNGFCLEGRVSEAVALVDRMVEMKQRPD-------LVT 177
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
+ LI G C GRV EAL ++ M E G PD V+Y V++ C+ A +L +M+
Sbjct: 178 VSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME 237
Query: 122 EKRI---LRMEEVVYESLMQGLSDEDA------------------YSSLMNDYLAQGDME 160
E+ I + +V +SL + S +DA YSSL+ G +
Sbjct: 238 ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWD 297
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
+ RE+ + + VT S I+ K+ + EAKE+ MI+ T TY++
Sbjct: 298 DGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT--ITYNS 355
Query: 221 LIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
LI+ GF + EA + D M+ +PD Y+ LI +C+ K
Sbjct: 356 LID---------------GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
VD ++ + G +P+ + L+
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLV 427
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 40/273 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG++PD TY+SL I+ +C + + + D M+ G PD +V
Sbjct: 341 MITRGIAPDTITYNSL-------IDGFCKENCLHEANQMFDLMVSKGCEPD-------IV 386
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY+ LI YC RV++ + + R + GL P+ ++YN ++ GFC+ + A EL EM
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 121 DEKRILRMEEVVYESLMQGLSDE----------------------DAYSSLMNDYLAQGD 158
R + V Y L+ GL D Y+ +++
Sbjct: 447 -VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
++ A+ L ++ G + VT +V I GL KK EA + M + C TY
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC--TPDDFTY 563
Query: 219 DALIE-NCSNNEFKSLVELVKGFRMRGLVSEAA 250
+ LI + + S VEL++ ++ G ++++
Sbjct: 564 NILIRAHLGGSGLISSVELIEEMKVCGFSADSS 596
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 141/332 (42%), Gaps = 60/332 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G+ D TYSSL I C G++ + + +MI ++PD +V
Sbjct: 271 MEMKGIKADVVTYSSL-------IGGLCNDGKWDDGAKMLREMIGRNIIPD-------VV 316
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR---IREPGKAYELK 117
T++ALI + G++ EA + M G++PD ++YN +I GFC+ + E + ++L
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 118 MEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+ +G D YS L+N Y ++ L REI+ G +
Sbjct: 377 VS------------------KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVE 235
++T + + G + + AKE+ M+S + TY L++ C N E +E
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV--PPSVVTYGILLDGLCDNGELNKALE 476
Query: 236 LVKGFRMRGLVSEAARAHDTMLHG--------------------NHKPDGGVYNFLIVEH 275
+ + + + ++ ++ ++HG KPD YN +I
Sbjct: 477 IFEKMQ-KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 276 CRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C+ ++ +A ++ +M G P F+ LI
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 49/298 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +GL PD T++ LIN YC G +H+ MI G SP++V
Sbjct: 412 MFCKGLEPDSVTFT-------ELINGYCKAGHMKDAFRVHNHMIQAGC-------SPNVV 457
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G C G ++ A +L M ++GL P+ +YN +++G C+ +A +L E
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 121 DEKRILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+ GL +D Y++LM+ Y G+M+KA + +E+ G V
Sbjct: 518 EA---------------AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVK 238
T +V +NG + +++L M++ TT+++L++ C N K+ + K
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA--TTFNSLVKQYCIRNNLKAATAIYK 620
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
RG+ PDG Y L+ HC+ +N+ +A+ ++ M GF
Sbjct: 621 DMCSRGV----------------GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 133/333 (39%), Gaps = 72/333 (21%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPD-FVTGS------ 56
+G +PD +YS +++N YC GE KV L + M G+ P+ ++ GS
Sbjct: 275 KGYTPDVISYS-------TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 57 ---------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
P V Y LI G+C G + A M ++PD +
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYL 154
+Y +ISGFC+I + +A +L EM +GL D ++ L+N Y
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEM---------------FCKGLEPDSVTFTELINGYC 432
Query: 155 AQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT 214
G M+ A+ + + G VT + I+GL K+ A E+L M +
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL--QPN 490
Query: 215 HTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIV 273
TY++++ C + + V+LV F GL D Y L+
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL----------------NADTVTYTTLMD 534
Query: 274 EHCRCKNVDKAYNMYTRMVHYGFVPHM--FSVL 304
+C+ +DKA + M+ G P + F+VL
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
++ +YN +I+ C LGR++EA +L M G +PD +SY+ V++G+CR E K ++L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL- 303
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
+E+ +++ L+ +Y S++ L+ + E+A+ E+ G L +
Sbjct: 304 IEVMKRKGLKPNSYIYGSII----------GLLCRICKLAEAEEAF---SEMIRQGILPD 350
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN------------- 224
+V + I+G K+ R A + M S TY A+I
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV--LTYTAIISGFCQIGDMVEAGKL 408
Query: 225 -----CSNNEFKSL--VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
C E S+ EL+ G+ G + +A R H+ M+ P+ Y LI C+
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++D A + M G P++F+ +++
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 132/320 (41%), Gaps = 47/320 (14%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
D G+ +F+ +F ++ + L E +V ++M++ G+ V S Y +
Sbjct: 170 DWGSDPRVFDVFFQVLVDFGLLREARRV---FEKMLNYGL----VLSVDSCNVYLTRLSK 222
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
C+ + A+ + R PE+G+ + SYNIVI C++ +A+ L + M+
Sbjct: 223 DCY--KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME------- 273
Query: 129 EEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFING 187
++G + D +YS+++N Y G+++K + L + G S I
Sbjct: 274 --------LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 188 LSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFK--------------- 231
L + + EA+E MI L T Y LI+ C + +
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDT--VVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 232 ----SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNM 287
+ ++ GF G + EA + M +PD + LI +C+ ++ A+ +
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 288 YTRMVHYGFVPHMFSVLALI 307
+ M+ G P++ + LI
Sbjct: 444 HNHMIQAGCSPNVVTYTTLI 463
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 49/298 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +GL PD T++ LIN YC G +H+ MI G SP++V
Sbjct: 412 MFCKGLEPDSVTFT-------ELINGYCKAGHMKDAFRVHNHMIQAGC-------SPNVV 457
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G C G ++ A +L M ++GL P+ +YN +++G C+ +A +L E
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 121 DEKRILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+ GL +D Y++LM+ Y G+M+KA + +E+ G V
Sbjct: 518 EA---------------AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVK 238
T +V +NG + +++L M++ TT+++L++ C N K+ + K
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA--TTFNSLVKQYCIRNNLKAATAIYK 620
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
RG+ PDG Y L+ HC+ +N+ +A+ ++ M GF
Sbjct: 621 DMCSRGV----------------GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 133/333 (39%), Gaps = 72/333 (21%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPD-FVTGS------ 56
+G +PD +YS +++N YC GE KV L + M G+ P+ ++ GS
Sbjct: 275 KGYTPDVISYS-------TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 57 ---------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
P V Y LI G+C G + A M ++PD +
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYL 154
+Y +ISGFC+I + +A +L EM +GL D ++ L+N Y
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEM---------------FCKGLEPDSVTFTELINGYC 432
Query: 155 AQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT 214
G M+ A+ + + G VT + I+GL K+ A E+L M +
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL--QPN 490
Query: 215 HTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIV 273
TY++++ C + + V+LV F GL D Y L+
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL----------------NADTVTYTTLMD 534
Query: 274 EHCRCKNVDKAYNMYTRMVHYGFVPHM--FSVL 304
+C+ +DKA + M+ G P + F+VL
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
++ +YN +I+ C LGR++EA +L M G +PD +SY+ V++G+CR E K ++L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL- 303
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
+E+ +++ L+ +Y S++ L+ + E+A+ E+ G L +
Sbjct: 304 IEVMKRKGLKPNSYIYGSII----------GLLCRICKLAEAEEAF---SEMIRQGILPD 350
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN------------- 224
+V + I+G K+ R A + M S TY A+I
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV--LTYTAIISGFCQIGDMVEAGKL 408
Query: 225 -----CSNNEFKSL--VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
C E S+ EL+ G+ G + +A R H+ M+ P+ Y LI C+
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++D A + M G P++F+ +++
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 132/320 (41%), Gaps = 47/320 (14%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
D G+ +F+ +F ++ + L E +V ++M++ G+ V S Y +
Sbjct: 170 DWGSDPRVFDVFFQVLVDFGLLREARRV---FEKMLNYGL----VLSVDSCNVYLTRLSK 222
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
C+ + A+ + R PE+G+ + SYNIVI C++ +A+ L + M+
Sbjct: 223 DCY--KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME------- 273
Query: 129 EEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFING 187
++G + D +YS+++N Y G+++K + L + G S I
Sbjct: 274 --------LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 188 LSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFK--------------- 231
L + + EA+E MI L T Y LI+ C + +
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDT--VVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 232 ----SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNM 287
+ ++ GF G + EA + M +PD + LI +C+ ++ A+ +
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 288 YTRMVHYGFVPHMFSVLALI 307
+ M+ G P++ + LI
Sbjct: 444 HNHMIQAGCSPNVVTYTTLI 463
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 132/294 (44%), Gaps = 45/294 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y LI+ C G+ ++V+ L D M G +P+ VT YN LI+G C G++++A+
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT-------YNTLIHGLCLKGKLDKAV 312
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+L M P+ V+Y +I+G + R A L M+E R + + +Y L+ G
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE-RGYHLNQHIYSVLISG 371
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
L +G E+A L R++A G V SV ++GL ++ + EAKE
Sbjct: 372 L-------------FKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 200 ILLSMISNSCLSKTTHTTYDALIE---------------------NCSNNEFKSLVELVK 238
IL MI++ CL TY +L++ CS N+F V L+
Sbjct: 419 ILNRMIASGCLPNA--YTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV-LID 475
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
G G V EA ML KPD Y+ +I C ++D A +Y M+
Sbjct: 476 GLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 113/270 (41%), Gaps = 32/270 (11%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
SP+ +++N +I C L V+ A+ + RGMPE PD +Y ++ G C+ +A
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L EM + V+Y L+ GL +GD+ + L + G +
Sbjct: 244 LLDEMQSEGC-SPSPVIYNVLIDGLC-------------KKGDLTRVTKLVDNMFLKGCV 289
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSK--TTHTTYDALIENCSNNEFKSL 233
VT + I+GL K + +A +L M+S+ C+ T T + L++ + L
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 234 VE----------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
+ L+ G G EA M KP+ VY+ L+ CR
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++A + RM+ G +P+ ++ +L+
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 32/297 (10%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
LWR ++ ++G ++ Y L++ C G+ ++ + ++MI +G LP+ T
Sbjct: 384 LWRKMA-EKGCKPNIV-VYSVLVDGLCREGKPNEAKEILNRMIASGCLPN-------AYT 434
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
Y++L+ G+ G EEA+ + + M + G S + Y+++I G C + G+ E M
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV---GRVKEAMM--- 488
Query: 122 EKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREI---AHDGYLSE 177
V + L G+ D AYSS++ G M+ A L E+ +
Sbjct: 489 ---------VWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSK--TTHTTYDALIE--NCSNNEFKSL 233
VT ++ ++GL + A ++L SM+ C T +T + L E N + L
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFL 599
Query: 234 VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTR 290
ELV R VS A + ML P + ++ E C+ K ++ A + R
Sbjct: 600 EELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCWR 656
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 131/303 (43%), Gaps = 45/303 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G P+ T+S+L IN CL G S+ L D+M+ G PD L+T N
Sbjct: 153 GYEPNTITFSTL-------INGLCLEGRVSEALELVDRMVEMGHKPD-------LITINT 198
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ G C G+ EA+ ++ M E G P+AV+Y V++ C+ + A EL +M+E+
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
I +++ V Y ++ GL G ++ A+ L E+ G + +T ++
Sbjct: 259 I-KLDAVKYSIIIDGLC-------------KHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
I G R + ++L MI T+ LI++ F G
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKI--NPNVVTFSVLIDS---------------FVKEG 347
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
+ EA H M+H PD Y LI C+ ++DKA M MV G P++ +
Sbjct: 348 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 305 ALI 307
LI
Sbjct: 408 ILI 410
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 45/296 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG++PD TY+SL I+ +C K + + D M+ G P++
Sbjct: 359 MIHRGIAPDTITYTSL-------IDGFCKENHLDKANQMVDLMVSKGC-------DPNIR 404
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N LI GYC R+++ L + R M G+ D V+YN +I GFC + + A EL EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+++ V Y+ L+ GL D G+ EKA + +I +
Sbjct: 465 VSRKV-PPNIVTYKILLDGLCD-------------NGESEKALEIFEKIEKSKMELDIGI 510
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ I+G+ ++ +A ++ S+ K TY+ +I G
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKG--VKPGVKTYNIMI---------------GGL 553
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+G +SEA M H PDG YN LI H + K+ + + GF
Sbjct: 554 CKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 139/331 (41%), Gaps = 54/331 (16%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +I+ C G NL ++M G+ + +++TYN LI G+C GR ++
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGI-------TTNIITYNILIGGFCNAGRWDDGA 318
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+LR M + ++P+ V+++++I F + + +A EL EM + I + + Y SL+ G
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP-DTITYTSLIDG 377
Query: 140 LSDED----------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
E+ ++ L+N Y ++ L R+++ G +++
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVEL 236
+VT + I G + + AKE+ M+S TY L++ C N E + +E+
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRK--VPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 237 VKGFRMRGLVSEAARAHDTMLHG--------------------NHKPDGGVYNFLIVEHC 276
+ + + ++ ++HG KP YN +I C
Sbjct: 496 FEKIEKSKMELDIG-IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 277 RCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + +A ++ +M G P ++ LI
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 141/307 (45%), Gaps = 46/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG+S + TY++L I C + ++ + + DQM +G+ +P+L+
Sbjct: 294 MRERGVSCNIVTYNTL-------IGGLCREMKLNEANKVVDQMKSDGI-------NPNLI 339
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI G+C +G++ +AL + R + GLSP V+YNI++SGFCR + A ++ EM
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+E+ I + +V Y L+ + D +MEKA L + G + + T
Sbjct: 400 EERGI-KPSKVTYTILIDTFARSD-------------NMEKAIQLRLSMEELGLVPDVHT 445
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
SV I+G K + EA + SM+ +C + Y+ +I G+
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNC--EPNEVIYNTMI---------------LGY 488
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
G A + M P+ Y ++I C+ + +A + +M+ G P
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Query: 301 FSVLALI 307
S+L+LI
Sbjct: 549 -SILSLI 554
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 141/364 (38%), Gaps = 74/364 (20%)
Query: 12 TYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLP---------DFVTGSPS---- 58
T + F Y +IN+Y + + ++M+ NG +P FV GS S
Sbjct: 89 TSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQW 148
Query: 59 --------------LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGF 104
+ ++ LI G C G +E++ +L + E G SP+ V Y +I G
Sbjct: 149 WSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC 208
Query: 105 CRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL---------------SDED----- 144
C+ E KA +L EM K L E Y L+ GL ED
Sbjct: 209 CKKGEIEKAKDLFFEMG-KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267
Query: 145 --AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
Y+ +MN G + A+ + E+ G VT + I GL ++ + EA +++
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 203 SMISNSCLSKTTHTTYDALIEN-------------CSNNEFKSLVE-------LVKGFRM 242
M S+ TY+ LI+ C + + + L LV GF
Sbjct: 328 QMKSDGI--NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP--HM 300
+G S AA+ M KP Y LI R N++KA + M G VP H
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 301 FSVL 304
+SVL
Sbjct: 446 YSVL 449
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 134/303 (44%), Gaps = 45/303 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD T+S+L IN CL G S+ L D+M+ G P+L+T NA
Sbjct: 137 GYEPDTVTFSTL-------INGLCLEGRVSEALELVDRMVEMG-------HKPTLITLNA 182
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ G C G+V +A+ ++ M E G P+ V+Y V+ C+ + A EL +M+E++
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
I +++ V Y ++ GL + G ++ A+ L E+ G+ ++ + +
Sbjct: 243 I-KLDAVKYSIIIDGLCKD-------------GSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
I G R + ++L MI T D + F +L++ F G
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKR-------KITPDVV-------AFSALIDC---FVKEG 331
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
+ EA H M+ PD Y LI C+ +DKA +M MV G P++ +
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 305 ALI 307
LI
Sbjct: 392 ILI 394
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 129/317 (40%), Gaps = 52/317 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R ++PD A+ +LI+ + G+ + LH +MI G+ SP V
Sbjct: 308 MIKRKITPD-------VVAFSALIDCFVKEGKLREAEELHKEMIQRGI-------SPDTV 353
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY +LI G+C ++++A +L M G P+ ++NI+I+G+C+ EL +M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
SL ++D Y++L+ + G +E A L +E+ + V+
Sbjct: 414 --------------SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 181 ESVFINGLSKKARTREAKEILLS---------------MISNSCLSKTTHTTYDALIENC 225
+ ++GL +A EI +I C + +D C
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF---C 516
Query: 226 S------NNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
S + K+ ++ G +G +SEA M H P+G YN LI H
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576
Query: 280 NVDKAYNMYTRMVHYGF 296
+ K+ + + GF
Sbjct: 577 DATKSAKLIEEIKRCGF 593
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 136/323 (42%), Gaps = 54/323 (16%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +I+ C G NL ++M G D ++ Y LI G+C+ GR ++
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD-------IIIYTTLIRGFCYAGRWDDGA 302
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+LR M + ++PD V+++ +I F + + +A EL EM ++ I + V Y SL+ G
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI-SPDTVTYTSLIDG 361
Query: 140 LSDED----------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
E+ ++ L+N Y ++ L R+++ G +++
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVEL 236
+VT + I G + + AKE+ M+S + +Y L++ C N E + +E+
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRV--RPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 237 VKGFRMRGLVSEAARAHDTMLHG--------------------NHKPDGGVYNFLIVEHC 276
+ + + ++ ++HG KPD YN +I C
Sbjct: 480 FEKIEKSKMELDIG-IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 277 RCKNVDKAYNMYTRMVHYGFVPH 299
+ ++ +A ++ +M G P+
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPN 561
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 155/382 (40%), Gaps = 90/382 (23%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML R + PD T++ L IN C G F K S L +M +G +P++V
Sbjct: 224 MLKRKICPDVATFNIL-------INVLCAEGSFEKSSYLMQKMEKSGY-------APTIV 269
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN +++ YC GR + A+ +L M G+ D +YN++I CR K Y L +M
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGD 158
KR++ EV Y +L+ G S+E +++L++ ++++G+
Sbjct: 330 -RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNS-CLSKTTHT- 216
++A + + G V+ V ++GL K A A+ + M N C+ + T+T
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448
Query: 217 -------------------------------TYDALIEN-CSNNEFKSLVELV-KGFRM- 242
TY ALI C FK+ E+V + +R+
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 243 -----------------RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAY 285
G + EA R ++ M+ H D +N L+ C+ V +A
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 286 NMYTRMVHYGFVPHMFSVLALI 307
M G +P+ S LI
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLI 590
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 126/312 (40%), Gaps = 45/312 (14%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
Y L++ Y + S L+ +I NG+LPD +T ++L+ G C +E
Sbjct: 794 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD-------KLTCHSLVLGICESNMLE 846
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE-------------- 122
L IL+ G+ D ++N++IS C E A++L M
Sbjct: 847 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 906
Query: 123 ---KRILRMEE---VVYESLMQGLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
R R +E V++E QG+S E Y L+N GD++ A+++ E+
Sbjct: 907 SVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKIC 966
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+V ES + L+K + EA +L M+ + T ++ L+ C N
Sbjct: 967 PPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP--TIASFTTLMHLCCKN------- 1017
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
G V EA M + K D YN LI C ++ A+ +Y M G
Sbjct: 1018 --------GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDG 1069
Query: 296 FVPHMFSVLALI 307
F+ + + ALI
Sbjct: 1070 FLANATTYKALI 1081
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 117/303 (38%), Gaps = 80/303 (26%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PD TYS+L IN +C G F + ++ G+ SP+ + Y+
Sbjct: 473 GIDPDIVTYSAL-------INGFCKVGRFKTAKEIVCRIYRVGL-------SPNGIIYST 518
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LIY C +G ++EA+ I M G + D ++N++++ C+ + +A E M
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
I L + ++ L+N Y G+ KA+ + E+ G+ T
Sbjct: 579 I--------------LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
+ GL K REA++ L K+ H A+
Sbjct: 625 LKGLCKGGHLREAEKFL----------KSLHAVPAAV----------------------- 651
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
DT++ YN L+ C+ N+ KA +++ MV +P ++
Sbjct: 652 ---------DTVM----------YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 692
Query: 305 ALI 307
+LI
Sbjct: 693 SLI 695
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 34/226 (15%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+G+SP+ Y LIN C G+ + ++MI + + P V S
Sbjct: 928 QGISPES-------RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAES------- 973
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
A++ G+ +EA +LR M +M L P S+ ++ C+ +A EL++ M
Sbjct: 974 AMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNC 1033
Query: 124 RILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
L+++ V Y L+ GL A+GDM A+ L E+ DG+L+ + T
Sbjct: 1034 G-LKLDLVSYNVLITGLC-------------AKGDMALAFELYEEMKGDGFLANATTYKA 1079
Query: 184 FINGLSKKARTREAKEILLS------MISNSCLSKTTHTTYDALIE 223
I GL + +I+L I++ LS+ +H +E
Sbjct: 1080 LIRGLLARETAFSGADIILKDLLARGFITSMSLSQDSHRNLKMAME 1125
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 116/290 (40%), Gaps = 39/290 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
++ LIN Y GE K ++ D+M G P F T Y +L+ G C G + EA
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT-------YGSLLKGLCKGGHLREA 637
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L+ + + + D V YN +++ C+ KA L EM ++ I
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI------------- 684
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREI-AHDGYLSESVTESVFINGLSKKARTREA 197
L D Y+SL++ +G A + +E A L V + F++G+ K + +
Sbjct: 685 -LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 743
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
M HT D + N ++ G+ G + + M
Sbjct: 744 IYFREQM------DNLGHTP-DIVTTN----------AMIDGYSRMGKIEKTNDLLPEMG 786
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ N P+ YN L+ + + K+V ++ +Y ++ G +P + +L+
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 127/324 (39%), Gaps = 61/324 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGE------FSKVSNLHDQMIHNGVLPDFVT 54
M+ R + PD TY+ SLI+ C G+ F+K + ++
Sbjct: 679 MVQRSILPDSYTYT-------SLISGLCRKGKTVIAILFAKEAEARGNVL---------- 721
Query: 55 GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAY 114
P+ V Y + G G+ + + M +G +PD V+ N +I G+ R+ + K
Sbjct: 722 --PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Query: 115 ELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
+L EM + G + Y+ L++ Y + D+ +++L R I +G
Sbjct: 780 DLLPEMGNQ--------------NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSL 233
L + +T + G+ + +IL + I + T++ LI C+N E
Sbjct: 826 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV--EVDRYTFNMLISKCCANGEINWA 883
Query: 234 VELVKGFRMRG--LVSEAARAHDTMLHGNHK-----------------PDGGVYNFLIVE 274
+LVK G L + A ++L+ NH+ P+ Y LI
Sbjct: 884 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 943
Query: 275 HCRCKNVDKAYNMYTRMVHYGFVP 298
CR ++ A+ + M+ + P
Sbjct: 944 LCRVGDIKTAFVVKEEMIAHKICP 967
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 101/262 (38%), Gaps = 40/262 (15%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+PS+ T NA++ G L+ M + + PD ++NI+I+ C K+
Sbjct: 195 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSY 254
Query: 116 LKMEMDEK----RILRMEEVVYESLMQGL-----------------SDEDAYSSLMNDYL 154
L +M++ I+ V++ +G +D Y+ L++D
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 314
Query: 155 AQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT 214
+ K Y+L R++ VT + ING S + + A ++L M+S
Sbjct: 315 RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL--SPN 372
Query: 215 HTTYDALIE-NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIV 273
H T++ALI+ + S FK +++ +GL P Y L+
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLT----------------PSEVSYGVLLD 416
Query: 274 EHCRCKNVDKAYNMYTRMVHYG 295
C+ D A Y RM G
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNG 438
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 118/244 (48%), Gaps = 37/244 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RGL P++ +++L I+ + GE + + +M+ G+ PD +V
Sbjct: 336 MCKRGLIPNDVIFTTL-------IHGHSRNGEIDLMKESYQKMLSKGLQPD-------IV 381
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YN L+ G+C G + A I+ GM GL PD ++Y +I GFCR + A E++ EM
Sbjct: 382 LYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
Query: 121 D--------------------EKRILRMEEVVYESLMQGLSDED-AYSSLMNDYLAQGDM 159
D E R++ E + E L G+ +D Y+ +M+ + +GD
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDA 501
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
+ + L +E+ DG++ VT +V +NGL K + + A +L +M++ + TY+
Sbjct: 502 QTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD--DITYN 559
Query: 220 ALIE 223
L+E
Sbjct: 560 TLLE 563
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 126/322 (39%), Gaps = 55/322 (17%)
Query: 11 GTYSSLFNAYFSL--------INAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
G Y + +A F L +N +C G S + D++ + P++V++
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSL-------QPTVVSF 278
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N LI GYC +G ++E + M + PD +Y+ +I+ C+ + A+ L EM
Sbjct: 279 NTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM-C 337
Query: 123 KRILRMEEVVYESLMQGLS----------------------DEDAYSSLMNDYLAQGDME 160
KR L +V++ +L+ G S D Y++L+N + GD+
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
A + + G + +T + I+G + A EI M N + + A
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI--ELDRVGFSA 455
Query: 221 LIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L+ C G G V +A RA ML KPD Y ++ C+ +
Sbjct: 456 LV--C-------------GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Query: 281 VDKAYNMYTRMVHYGFVPHMFS 302
+ + M G VP + +
Sbjct: 501 AQTGFKLLKEMQSDGHVPSVVT 522
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 14/120 (11%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML G+ PD+ TY+ + ++A+C G+ L +M +G +P S+V
Sbjct: 476 MLRAGIKPDDVTYTMM-------MDAFCKKGDAQTGFKLLKEMQSDGHVP-------SVV 521
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L+ G C LG+++ A +L M +G+ PD ++YN ++ G R K Y K E+
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI 581
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 144/346 (41%), Gaps = 56/346 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSN----LHDQMIH----------- 45
ML RG +PD+ TY L N + F ++ + + +IH
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 372
Query: 46 NGVLPDFVTG---SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVIS 102
VL D VT P + TYN+LIYGY G V AL +L M G P+ SY I++
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 103 GFCRIREPGKAYELKMEMD--------------------EKRILRMEEVVYESLMQGLS- 141
GFC++ + +AY + EM E RI E+ E +G
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
D ++SL++ +++ A L R++ +G ++ +VT + IN ++ +EA++++
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
M+ S TY++LI KG G V +A + ML H
Sbjct: 553 NEMVFQG--SPLDEITYNSLI---------------KGLCRAGEVDKARSLFEKMLRDGH 595
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P N LI CR V++A MV G P + + +LI
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 122/308 (39%), Gaps = 50/308 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML R + P T+ + + A+C E +L M +G +P+ V
Sbjct: 208 MLSRKIPPTLFTFGVV-------MKAFCAVNEIDSALSLLRDMTKHGCVPNSVI------ 254
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y LI+ RV EAL +L M MG PDA ++N VI G C+
Sbjct: 255 -YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKF------------- 300
Query: 121 DEKRILRMEEVVYESLMQGLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
RI ++V L++G + +D Y LMN G ++ A L I E V
Sbjct: 301 --DRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIV 354
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
+ I+G R +AK +L M+ T+Y + + C+ N L+ G
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMV----------TSYGIVPDVCTYN------SLIYG 398
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ GLV A M + KP+ Y L+ C+ +D+AYN+ M G P+
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 300 MFSVLALI 307
LI
Sbjct: 459 TVGFNCLI 466
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 140/366 (38%), Gaps = 92/366 (25%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +LI++ ++ L ++M G +PD T+N +I G C R+ EA
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD-------AETFNDVILGLCKFDRINEAA 307
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
++ M G +PD ++Y +++G C+I A +L RI + E V++ +L+ G
Sbjct: 308 KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY-----RIPKPEIVIFNTLIHG 362
Query: 140 ------LSDEDA-----------------YSSLMNDYLAQ-------------------- 156
L D A Y+SL+ Y +
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 157 ---------------GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
G +++AY + E++ DG +V + I+ K+ R EA EI
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 202 LSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLV-------------------ELVKGFR 241
M C K T+++LI C +E K + L+ F
Sbjct: 483 REMPRKGC--KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 242 MRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMF 301
RG + EA + + M+ D YN LI CR VDKA +++ +M+ G P
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 302 SVLALI 307
S LI
Sbjct: 601 SCNILI 606
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 63/235 (26%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y L++ +C G+ + N+ ++M +G+ P+ V +N LI +C R+ EA
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGL-------KPNTVGFNCLISAFCKEHRIPEA 478
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL---------------------- 116
+ I R MP G PD ++N +ISG C + E A L
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 117 ---KMEMDEKRIL---------RMEEVVYESLMQGLS-----------------DEDAYS 147
+ E+ E R L ++E+ Y SL++GL D A S
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 148 S-----LMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
+ L+N G +E+A +E+ G + VT + INGL + R +
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 28/188 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+++G DE TY+SL I C GE K +L ++M+ +G +PS +
Sbjct: 555 MVFQGSPLDEITYNSL-------IKGLCRAGEVDKARSLFEKMLRDG-------HAPSNI 600
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ N LI G C G VEEA+ + M G +PD V++N +I+G CR A ++ +
Sbjct: 601 SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR------AGRIEDGL 654
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
R L+ E + D +++LM+ G + A +L E DG++ T
Sbjct: 655 TMFRKLQAEGIP--------PDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
Query: 181 ESVFINGL 188
S+ + +
Sbjct: 707 WSILLQSI 714
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 149/351 (42%), Gaps = 56/351 (15%)
Query: 2 LWRGLSPDEG---TYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPS 58
L R ++ DE Y + Y +L+N+ G ++ ++ +M+ + V P+
Sbjct: 165 LCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN------- 217
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
+ TYN ++ GYC LG VEEA + + E GL PD +Y +I G+C+ ++ A+++
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 119 EMDEKRILRMEEVVYESLMQGL-----------------SDE-----DAYSSLMNDYLAQ 156
EM K R EV Y L+ GL DE Y+ L+
Sbjct: 278 EMPLKGC-RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
+A L +E+ G T +V I+ L + + +A+E+L M+ +
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV--I 394
Query: 217 TYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK------------- 262
TY+ALI C + V++V+ R L S R ++ ++ G K
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKL-SPNTRTYNELIKGYCKSNVHKAMGVLNKM 453
Query: 263 ------PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN LI CR N D AY + + M G VP ++ ++I
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 139/327 (42%), Gaps = 51/327 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML +GL P+ TY+ +LIN YC G ++ + M + SP+
Sbjct: 384 MLEKGLMPNVITYN-------ALINGYCKRGMIEDAVDVVELMESRKL-------SPNTR 429
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI GYC V +A+G+L M E + PD V+YN +I G CR AY L M
Sbjct: 430 TYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+++ + + D+ Y+S+++ +E+A L + G V
Sbjct: 489 NDRGL--------------VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFK--SLVE-- 235
+ I+G K + EA +L M+S +CL + T++ALI C++ + K +L+E
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS--LTFNALIHGLCADGKLKEATLLEEK 592
Query: 236 ---------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L+ G A ML KPD Y I +CR
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ A +M +M G P +F+ +LI
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 104/298 (34%), Gaps = 91/298 (30%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML G PD TY++ I YC G ++ +M NGV SP L
Sbjct: 628 MLSSGTKPDAHTYTTF-------IQTYCREGRLLDAEDMMAKMRENGV-------SPDLF 673
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMG------------------------------- 89
TY++LI GY LG+ A +L+ M + G
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 90 ----------------------LSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILR 127
++P+A SY +I G C + A ++ M +
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 128 MEEVVYESLMQ---GLSDEDAYSSLMNDYLA-------------------QGDMEKAYIL 165
E+V+ +L+ L + + +++D + +G+ E+ +
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSV 853
Query: 166 DREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
+ + GY + + + I+G+ K+ E+ M N C K + TY LIE
Sbjct: 854 FQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGC--KFSSQTYSLLIE 909
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 136/325 (41%), Gaps = 56/325 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD T+++L + F L + S+ L DQM+ G PD LV
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLF-------LHNKASEAVALVDQMVQRGCQPD-------LV 224
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY ++ G C G ++ AL +L+ M + + D V YN +I G C+ + A L EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 121 DEKRILRMEEVVYESLMQGLSD----EDA------------------YSSLMNDYLAQGD 158
D K I R + Y SL+ L + DA +S+L++ ++ +G
Sbjct: 285 DNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+ +A L E+ + T S ING R EAK + MIS C TY
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV--VTY 401
Query: 219 DALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
LI+ C + +EL + RGLV + T++HG F C
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYTTLIHG----------FFQARDC- 449
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFS 302
D A ++ +MV G P++ +
Sbjct: 450 ----DNAQMVFKQMVSVGVHPNILT 470
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 141/317 (44%), Gaps = 52/317 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R ++P+ T+S+L I+A+ G+ + L+D+MI + PD +
Sbjct: 319 MIERKINPNVVTFSAL-------IDAFVKEGKLVEAEKLYDEMIKRSIDPD-------IF 364
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++LI G+C R++EA + M P+ V+Y+ +I GFC+ + + EL EM
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++ ++ + Y++L++ + D + A ++ +++ G +T
Sbjct: 425 SQRGLV--------------GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
++ ++GL K + +A ++ + S + +T Y+ +IE C + + EL
Sbjct: 471 YNILLDGLCKNGKLAKAM-VVFEYLQRSTMEPDIYT-YNIMIEGMCKAGKVEDGWELFCN 528
Query: 240 FRMRGLVSEAARAHDTMLHGNHK--------------------PDGGVYNFLIVEHCRCK 279
++G VS A++TM+ G + P+ G YN LI R
Sbjct: 529 LSLKG-VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Query: 280 NVDKAYNMYTRMVHYGF 296
+ + + + M GF
Sbjct: 588 DREASAELIKEMRSCGF 604
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 45/303 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHN------------GVLPDFVTGSP--SLVTYNA 64
++F+L + C F+ S + +++ N + D V P S+V +N
Sbjct: 29 SFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNK 88
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ + + E + + M +G+S D +Y+I I+ FCR + A +
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV-------- 140
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
+ +M ++ YE D SSL+N Y + A L ++ GY ++ T +
Sbjct: 141 LAKMMKLGYE------PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL 194
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
I+GL + EA ++ M+ C + TY +V G RG
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGC--QPDLVTYGT---------------VVNGLCKRG 237
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
+ A M G + D +YN +I C+ K++D A N++T M + G P +F+
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 305 ALI 307
+LI
Sbjct: 298 SLI 300
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 49/216 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M RGL + TY++L + +F + + QM+ GV P+ +T +
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQ-------ARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P + TYN +I G C G+VE+ + + G+SP
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ ++YN +ISGFCR +A L +M E L + Y++L+
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKED--------------GPLPNSGTYNTLIRA 582
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
L GD E + L +E+ G+ ++ T + N L
Sbjct: 583 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 134/303 (44%), Gaps = 49/303 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
+IN +C + S ++ +M+ G PD VT +L+ G+C RV +A+ ++
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPD-------RVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M E+G PD V+YN +I C+ + A++ E++ K I R V Y +L+ GL +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLCN 237
Query: 143 ----EDA------------------YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
DA YS+L++ ++ G + +A L E+ + VT
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
S INGL R EA ++ M+S CL+ +Y+ LI C + ++L +
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADV--VSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
RGLVS YN LI + +VDKA +++M +G P
Sbjct: 356 MSQRGLVSNTV----------------TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 300 MFS 302
+++
Sbjct: 400 IWT 402
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + PD TYSSL IN CL + + + D M+ G L D +V
Sbjct: 286 MVRMSIDPDIVTYSSL-------INGLCLHDRIDEANQMFDLMVSKGCLAD-------VV 331
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+YN LI G+C RVE+ + + R M + GL + V+YN +I GF + + KA E +M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
D I + Y L+ GL D G++EKA ++ ++ + VT
Sbjct: 392 DFFGI-SPDIWTYNILLGGLCD-------------NGELEKALVIFEDMQKREMDLDIVT 437
Query: 181 ESVFINGLSKKARTREAKEILLSM 204
+ I G+ K + EA + S+
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSL 461
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 108/267 (40%), Gaps = 32/267 (11%)
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
L T+N +I +C +V AL IL M ++G PD V+ +++GFCR A L
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL-- 177
Query: 119 EMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+ +M E+ Y+ D AY+++++ + A+ +EI G
Sbjct: 178 ------VDKMVEIGYK------PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNV 225
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSK--TTHTTYDALIENCSNNEFKSLVE- 235
VT + +NGL +R +A +L MI T DA ++N E K L E
Sbjct: 226 VTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 236 ---------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L+ G + + EA + D M+ D YN LI C+ K
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
V+ ++ M G V + + LI
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTYNTLI 372
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RGL + TY++L +F G+ K QM DF SP +
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQ-------AGDVDKAQEFFSQM-------DFFGISPDIW 401
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L+ G C G +E+AL I M + + D V+Y VI G C+ + +A+ L +
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 121 DEKRILRMEEVVYESLMQGL 140
K L+ + V Y ++M GL
Sbjct: 462 SLKG-LKPDIVTYTTMMSGL 480
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 133/303 (43%), Gaps = 44/303 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD TY++L I +C E +K S + + V SP +VTY +
Sbjct: 236 GCEPDIVTYNTL-------IQGFCKSNELNKASEMFKDVKSGSVC------SPDVVTYTS 282
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
+I GYC G++ EA +L M +G+ P V++N+++ G+ + E A E++ +M
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS-- 340
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
D ++SL++ Y G + + + L E+ G + T S+
Sbjct: 341 ------------FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
IN L + R +A+E+L + S + + Y+ +I+ GF G
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQP--FMYNPVID---------------GFCKAG 431
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
V+EA + M KPD + LI+ HC + +A +++ +MV G P +V
Sbjct: 432 KVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Query: 305 ALI 307
+L+
Sbjct: 492 SLL 494
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 26/141 (18%)
Query: 2 LW-----RGLSPDEGTYSSLFNAYFS---LINAYCLGGEFSKVSNLHDQMIHNGVLPDFV 53
LW RG+ P+ TYS L NA + L+ A L G+ + + ++N V+ F
Sbjct: 369 LWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Query: 54 TG------------------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
P +T+ LI G+C GR+ EA+ I M +G SPD +
Sbjct: 429 KAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488
Query: 96 SYNIVISGFCRIREPGKAYEL 116
+ + ++S + +AY L
Sbjct: 489 TVSSLLSCLLKAGMAKEAYHL 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 133/303 (43%), Gaps = 44/303 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD TY++L I +C E +K S + + V SP +VTY +
Sbjct: 236 GCEPDIVTYNTL-------IQGFCKSNELNKASEMFKDVKSGSVC------SPDVVTYTS 282
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
+I GYC G++ EA +L M +G+ P V++N+++ G+ + E A E++ +M
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS-- 340
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
D ++SL++ Y G + + + L E+ G + T S+
Sbjct: 341 ------------FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
IN L + R +A+E+L + S + + Y+ +I+ GF G
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQP--FMYNPVID---------------GFCKAG 431
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
V+EA + M KPD + LI+ HC + +A +++ +MV G P +V
Sbjct: 432 KVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Query: 305 ALI 307
+L+
Sbjct: 492 SLL 494
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 26/141 (18%)
Query: 2 LW-----RGLSPDEGTYSSLFNAYFS---LINAYCLGGEFSKVSNLHDQMIHNGVLPDFV 53
LW RG+ P+ TYS L NA + L+ A L G+ + + ++N V+ F
Sbjct: 369 LWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Query: 54 TG------------------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
P +T+ LI G+C GR+ EA+ I M +G SPD +
Sbjct: 429 KAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488
Query: 96 SYNIVISGFCRIREPGKAYEL 116
+ + ++S + +AY L
Sbjct: 489 TVSSLLSCLLKAGMAKEAYHL 509
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 139/325 (42%), Gaps = 54/325 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD + +FN +L+N CL S+ L D+M+ G P+L+T N
Sbjct: 153 GYEPD----TVIFN---TLLNGLCLECRVSEALELVDRMVEMG-------HKPTLITLNT 198
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ G C G+V +A+ ++ M E G P+ V+Y V++ C+ + A EL +M+E+
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 125 ILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQGDMEKA 162
I +++ V Y ++ GL +D Y++L+ + G +
Sbjct: 259 I-KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
L R++ VT SV I+ K+ + REA ++L M+ T TY++LI
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT--ITYNSLI 375
Query: 223 ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
+ GF + EA + D M+ PD +N LI +C+ +D
Sbjct: 376 D---------------GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 283 KAYNMYTRMVHYGFVPHMFSVLALI 307
++ M G + + + L+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLV 445
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R +SP+ T+S L I+++ G+ + L +M+ G+ +P+ +
Sbjct: 324 MIKRKISPNVVTFSVL-------IDSFVKEGKLREADQLLKEMMQRGI-------APNTI 369
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI G+C R+EEA+ ++ M G PD +++NI+I+G+C+ EL EM
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ ++ V Y +L+QG + G +E A L +E+ + V+
Sbjct: 430 SLRGVI-ANTVTYNTLVQG-------------FCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ ++GL +A EI I S + + C+ ++ +L
Sbjct: 476 YKILLDGLCDNGELEKALEI-FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
++G+ K D YN +I E CR ++ KA ++ +M G P
Sbjct: 535 PLKGV----------------KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 301 FSVLALI 307
+ LI
Sbjct: 579 LTYNILI 585
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 47/308 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG++P+ TY+SL I+ +C + + D MI G PD ++
Sbjct: 359 MMQRGIAPNTITYNSL-------IDGFCKENRLEEAIQMVDLMISKGCDPD-------IM 404
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N LI GYC R+++ L + R M G+ + V+YN ++ GFC+ + A +L EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+R+ R + V Y+ L+ GL D G++EKA + +I +
Sbjct: 465 VSRRV-RPDIVSYKILLDGLCD-------------NGELEKALEIFGKIEKSKMELDIGI 510
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI-ENCSNNEFKSLVELVKG 239
+ I+G+ ++ +A ++ S+ K Y+ +I E C +
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGV--KLDARAYNIMISELCRKDS---------- 558
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+S+A M H PD YN LI H + A + M GF
Sbjct: 559 ------LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPAD 612
Query: 300 MFSVLALI 307
+ +V +I
Sbjct: 613 VSTVKMVI 620
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 138/336 (41%), Gaps = 70/336 (20%)
Query: 5 GLSPDEGTYSSLFN----------------------------AYFSLINAYCLGGEFSKV 36
GL PD+ TY++L + Y ++++A C G S+
Sbjct: 378 GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEA 437
Query: 37 SNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
+L ++M+ G P P +VTY A++ G+C LG V++A +L+ M G P+ VS
Sbjct: 438 KDLINEMLSKGHCP------PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVS 491
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQ 156
Y +++G CR + +A E+ M M E+ + Y +M GL E
Sbjct: 492 YTALLNGMCRTGKSLEAREM-MNMSEEHWWSPNSITYSVIMHGLRRE------------- 537
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
G + +A + RE+ G+ V ++ + L + RT EA++ + ++ C +
Sbjct: 538 GKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 597
Query: 217 TYDALIEN-CSNNEFKSLVE-------------------LVKGFRMRGLVSEAARAHDTM 256
T +I C N+E + + LV +G ++EA M
Sbjct: 598 T--TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKM 655
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
LH P Y +I +C+ VD + +M+
Sbjct: 656 LHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 29/246 (11%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P++VTYN +I GYC L RVEEA+ +L M G PD VSY ++ C+ + + +L
Sbjct: 310 PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDL 369
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+M ++ L ++V Y +L+ L+ D + + + EK + +D+ GY
Sbjct: 370 MKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEAL--WFLKDAQEKGFRIDKL----GY-- 421
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
S ++ L K+ R EAK+++ M+S H D + + +
Sbjct: 422 -----SAIVHALCKEGRMSEAKDLINEMLSKG------HCPPDVV----------TYTAV 460
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
V GF G V +A + M HKP+ Y L+ CR +A M + +
Sbjct: 461 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW 520
Query: 297 VPHMFS 302
P+ +
Sbjct: 521 SPNSIT 526
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 38/290 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A+ ++ +Y G+ + M GV P+L+ N I + R+E+A
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGV-------EPNLLICNTTIDVFVRANRLEKA 296
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L L M +G+ P+ V+YN +I G+C + +A EL +M K L ++V Y ++M
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCL-PDKVSYYTIMG 355
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
L E + + ++ + G + + VT + I+ L+K EA
Sbjct: 356 YLCKEKRIVEVRD------------LMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEAL 403
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
L + Y A++ L K RM SEA + ML
Sbjct: 404 WFLKDAQEKG--FRIDKLGYSAIVH-----------ALCKEGRM----SEAKDLINEMLS 446
Query: 259 GNH-KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
H PD Y ++ CR VDKA + M +G P+ S AL+
Sbjct: 447 KGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALL 496
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 133/351 (37%), Gaps = 79/351 (22%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFV-----------TG------------ 55
Y +++N +C GE K L M +G P+ V TG
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS 515
Query: 56 -----SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
SP+ +TY+ +++G G++ EA ++R M G P V N+++ CR
Sbjct: 516 EEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR---D 572
Query: 111 GKAYELKMEMDE--KRILRMEEVVYESLMQGLSDED----------------------AY 146
G+ +E + M+E + + V + +++ G D Y
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632
Query: 147 SSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMIS 206
++L++ +G + +A L +++ H G VT I+ + + + IL MIS
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Query: 207 NSCLSKTTHTTYDALIEN--------------------CSNNEFKSLVELVKGFRMRGLV 246
+ T Y+ +IE S ++ K+ L++G+ +G+
Sbjct: 693 R----QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVP 748
Query: 247 SEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
A + M + N PD + L VD+A + R+V G +
Sbjct: 749 LSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHI 799
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +L++ G ++ + L +M+H G+ P+ VTY +I+ YC +G+V++
Sbjct: 631 TYTTLVDTLGKKGRIAEATELMKKMLHKGI-------DPTPVTYRTVIHRYCQMGKVDDL 683
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ IL M + YN VI C + GK E + ++LR
Sbjct: 684 VAILEKM--ISRQKCRTIYNQVIEKLCVL---GKLEEADTLLG--KVLR---------TA 727
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAY-----ILDREIAHDGYLSESVTESVFINGLSKKAR 193
SD +LM YL +G AY + +R + D + E +++ + + G +
Sbjct: 728 SRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKG-----K 782
Query: 194 TREAKEILLSMISNSCLSKTT 214
EA +++L ++ +S +
Sbjct: 783 VDEADKLMLRLVERGHISPQS 803
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 47/300 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R ++PD T+S+L I+A+ G+ + L+D+M+ + PS+V
Sbjct: 317 MIERKINPDVFTFSAL-------IDAFVKEGKLVEAEKLYDEMVKRSI-------DPSIV 362
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++LI G+C R++EA + M PD V+YN +I GFC+ + + E+ EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ R L V Y L+QGL GD + A + +E+ DG +T
Sbjct: 423 SQ-RGLVGNTVTYNILIQGL-------------FQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
+ ++GL K + +A ++ + S + T + TY+ +IE C + + +L
Sbjct: 469 YNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIY-TYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
++G+ KPD YN +I CR + ++A ++ M G +P+
Sbjct: 527 LSLKGV----------------KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 126/305 (41%), Gaps = 41/305 (13%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTG-SPSLVTYNALIYGYCFLGRVEEALG 80
SL+N YC S+ L DQM FVTG P+ VT+N LI+G + EA+
Sbjct: 156 SLLNGYCHSKRISEAVALVDQM--------FVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 81 ILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL 140
++ M G PD V+Y +V++G C+ + A+ L +M++ + L ++Y +++ GL
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDGL 266
Query: 141 SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEI 200
M+ A L +E+ G VT S I+ L R +A +
Sbjct: 267 C-------------KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 201 LLSMISNSCLSKT------------------THTTYDALIENCSNNEFKSLVELVKGFRM 242
L MI YD +++ + + L+ GF M
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+ EA + + M+ + PD YN LI C+ K V++ ++ M G V + +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 303 VLALI 307
LI
Sbjct: 434 YNILI 438
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 141/384 (36%), Gaps = 94/384 (24%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M G P+ T+++L + F L + S+ L D+M+ G PD LV
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLF-------LHNKASEAMALIDRMVAKGCQPD-------LV 222
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY ++ G C G + A +L M + L P + YN +I G C+ + A L EM
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 121 DEKRILRMEEVVYESLMQGLSD----EDA------------------YSSLMNDYLAQGD 158
+ K I R V Y SL+ L + DA +S+L++ ++ +G
Sbjct: 283 ETKGI-RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+ +A L E+ VT S ING R EAK++ M+S C TY
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV--TY 399
Query: 219 DALIEN-CSNNEFKSLVELVKGFRMRGLVSEAAR-------------------------- 251
+ LI+ C + +E+ + RGLV
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 252 --------AHDTMLHG--------------------NHKPDGGVYNFLIVEHCRCKNVDK 283
++T+L G +P YN +I C+ V+
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 284 AYNMYTRMVHYGFVPHMFSVLALI 307
++++ + G P + + +I
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMI 543
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 103/262 (39%), Gaps = 70/262 (26%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R + P TYSSL IN +C+ + + + M+ PD +V
Sbjct: 352 MVKRSIDPSIVTYSSL-------INGFCMHDRLDEAKQMFEFMVSKHCFPD-------VV 397
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI G+C RVEE + + R M + GL + V+YNI+I G + + A E+ EM
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 121 D------------------------EKRIL--------RMEEVVY------ESLMQGLSD 142
EK ++ +ME +Y E + +
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 143 ED------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
ED AY+++++ + +G E+A L +E+ DG L S +
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Query: 185 INGLSKKARTREAKEILLSMIS 206
I + + E++ M S
Sbjct: 578 IRARLRDGDREASAELIKEMRS 599
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 109/251 (43%), Gaps = 31/251 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS++ ++ L+ + + + + + M +G+ + +Y+I+I+ FCR + A +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+ +M ++ YE + LS SL+N Y + +A L ++ GY
Sbjct: 139 --------LGKMMKLGYEPNIVTLS------SLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+VT + I+GL + EA ++ M++ C + TY +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC--QPDLVTYGV---------------V 227
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
V G RG A + M G +P +YN +I C+ K++D A N++ M G
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 297 VPHMFSVLALI 307
P++ + +LI
Sbjct: 288 RPNVVTYSSLI 298
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 134/336 (39%), Gaps = 68/336 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
ML GLSPD TY SL L+ A C G+ + + M V+PD V S
Sbjct: 331 MLRSGLSPDSTTYRSL------LMEA-CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P V Y LI GYC G + A+ + M + G +
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D V+YN ++ G C+ + G+A +L EM E+ + D + L++
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERAL--------------FPDSYTLTILIDG 489
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
+ G+++ A L +++ + VT + ++G K AKEI M+S L
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP- 548
Query: 213 TTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
T +Y L+ CS +G ++EA R D M+ N KP + N +
Sbjct: 549 -TPISYSILVNALCS----------------KGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 272 IVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
I +CR N + +M+ GFVP S LI
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 127/300 (42%), Gaps = 47/300 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL PD Y+ L I YC G S NL ++M+ G D +VTYN
Sbjct: 405 GLIPDNVIYTIL-------IQGYCRKGMISVAMNLRNEMLQQGCAMD-------VVTYNT 450
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
+++G C + EA + M E L PD+ + I+I G C++ A EL +M EKR
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
I R++ V Y +L+ G GD++ A + ++ L ++ S+
Sbjct: 511 I-RLDVVTYNTLLDGFG-------------KVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
+N L K EA + MIS + K T +++I KG+ G
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNI--KPTVMICNSMI---------------KGYCRSG 599
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM--VHYGFVPHMFS 302
S+ + M+ PD YN LI R +N+ KA+ + +M G VP +F+
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 119/290 (41%), Gaps = 45/290 (15%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
++NA C G+ KV Q+ GV PD +VTYN LI Y G +EEA ++
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPD-------IVTYNTLISAYSSKGLMEEAFELM 293
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK---------RILRMEE--- 130
MP G SP +YN VI+G C+ + +A E+ EM R L ME
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 131 ---VVYESLMQGLSDEDA------YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
V E + + D +SS+M+ + G+++KA + + G + ++V
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFR 241
++ I G +K A + M+ C TY+ ++ G
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDV--VTYNTILH---------------GLC 456
Query: 242 MRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
R ++ EA + + M PD LI HC+ N+ A ++ +M
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y L+NA C G ++ + D+MI + P+++ N++I GYC G +
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNI-------KPTVMICNSMIKGYCRSGNASDG 604
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L M G PD +SYN +I GF R KA+ L +M+E+ Q
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE--------------Q 650
Query: 139 G--LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
G + D Y+S+++ + Q M++A ++ R++ G + T + ING + E
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 197 AKEI 200
A I
Sbjct: 711 AFRI 714
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 120/288 (41%), Gaps = 56/288 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M R L PD T + L I+ +C G L +M + D +V
Sbjct: 471 MTERALFPDSYTLTIL-------IDGHCKLGNLQNAMELFQKMKEKRIRLD-------VV 516
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L+ G+ +G ++ A I M + P +SY+I+++ C +A+ + EM
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Query: 121 DEKRILRMEEVVYESLMQG----------------------LSDEDAYSSLMNDYLAQGD 158
K I + ++ S+++G + D +Y++L+ ++ + +
Sbjct: 577 ISKNI-KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 159 MEKAYILDREIAHD--GYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
M KA+ L +++ + G + + T + ++G ++ + +EA+ +L MI +
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV--NPDRS 693
Query: 217 TYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
TY +I GF + ++EA R HD ML PD
Sbjct: 694 TYTCMIN---------------GFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 34/257 (13%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
S+ NALI +G VE A G+ + + G+ + + NI+++ C+ + K
Sbjct: 199 SIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFL 258
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
++ EK VY ++ Y++L++ Y ++G ME+A+ L + G+
Sbjct: 259 SQVQEKG-------VYPDIV-------TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPG 304
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELV 237
T + INGL K + AKE+ M+ S LS + T L+E C + ++
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEML-RSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 238 KGFRMRGLVSE-------------------AARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
R R +V + A +++ PD +Y LI +CR
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 279 KNVDKAYNMYTRMVHYG 295
+ A N+ M+ G
Sbjct: 424 GMISVAMNLRNEMLQQG 440
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 133/307 (43%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG+SP+ TY++L ++ YC+ S+ +N+ D M+ N SP +V
Sbjct: 324 MITRGISPNIITYNTL-------MDGYCMQNRLSEANNMLDLMVRNKC-------SPDIV 369
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+ +LI GYC + RV++ + + R + + GL +AV+Y+I++ GFC+ + A EL EM
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+L + + Y L+ GL D G +EKA + ++ V
Sbjct: 430 VSHGVLP-DVMTYGILLDGLCD-------------NGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ I G+ K + +A + S+ K TY +I G
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKG--VKPNVMTYTVMIS---------------GL 518
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+G +SEA M + P+ YN LI H R ++ + + M GF
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADA 578
Query: 301 FSVLALI 307
S+ +I
Sbjct: 579 SSIKMVI 585
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 56/321 (17%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD T+++L F L G+ S+ L D+M+ NG PD +VTYN+
Sbjct: 153 GYEPDTTTFNTLIKGLF-------LEGKVSEAVVLVDRMVENGCQPD-------VVTYNS 198
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
++ G C G AL +LR M E + D +Y+ +I CR A L EM+ K
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258
Query: 125 ILRMEEVVYESLMQGLSDEDAYSS----------------------LMNDYLAQGDMEKA 162
I + V Y SL++GL ++ L++ ++ +G +++A
Sbjct: 259 I-KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
L +E+ G +T + ++G + R EA +L M+ N C T+ +LI
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC--SPDIVTFTSLI 375
Query: 223 EN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
+ C +++ + RGLV+ A Y+ L+ C+ +
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAV----------------TYSILVQGFCQSGKI 419
Query: 282 DKAYNMYTRMVHYGFVPHMFS 302
A ++ MV +G +P + +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMT 440
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 119/281 (42%), Gaps = 42/281 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y +IN C F ++ +M+ G PD +VT ++LI G+C RV +A
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD-------VVTVSSLINGFCQGNRVFDA 158
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL--KMEMDEKRILRMEEVVYESL 136
+ ++ M EMG PD V YN +I G C+I A EL +ME D +R + V Y SL
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG---VRADAVTYNSL 215
Query: 137 MQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
+ GL G A L R++ + +T + I+ K+ + E
Sbjct: 216 VAGLC-------------CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 262
Query: 197 AKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTM 256
A ++ Y+ + C + + + L+ G M G V EA + D M
Sbjct: 263 AMKL-----------------YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
+ PD YN LI C+ K VD+ ++ M G V
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 32/209 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M R + PD TY+SL IN C+ G + + D M+ G LPD +V
Sbjct: 270 MTRRCVDPDVFTYNSL-------INGLCMHGRVDEAKQMLDLMVTKGCLPD-------VV 315
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI G+C RV+E + R M + GL D ++YN +I G+ + P A E+ M
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 121 DEKRILRMEEVVYESLMQGLSDEDA------------------YSSLMNDYLAQGDMEKA 162
D + +R ++ L E A Y+ +++ G++E A
Sbjct: 376 DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKK 191
+ L R ++ G + V+ + I+G +K
Sbjct: 436 WDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 135/331 (40%), Gaps = 52/331 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD Y+++ I+ C G + L D+M +GV D VTYN+
Sbjct: 169 GFRPDVVIYNTI-------IDGSCKIGLVNDAVELFDRMERDGVRAD-------AVTYNS 214
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ G C GR +A ++R M + P+ +++ VI F + + +A +L EM +R
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM-TRR 273
Query: 125 ILRMEEVVYESLMQGLS----------------------DEDAYSSLMNDYLAQGDMEKA 162
+ + Y SL+ GL D Y++L+N + +++
Sbjct: 274 CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEG 333
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD--- 219
L RE+A G + +++T + I G + R A+EI M S + + Y
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCM 393
Query: 220 --------ALIENCSNNEFKSLVE----LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGV 267
L EN +E + + ++ G G V +A ++ KPD
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Query: 268 YNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
Y +I CR + DK+ +Y +M G +P
Sbjct: 454 YTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 32/151 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFS-------------------------LINAYCLGGEFSK 35
M RGL D TY+++ YF L+ C+ K
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEK 399
Query: 36 VSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
L + M + + D + TYN +I+G C +G VE+A + R + GL PD V
Sbjct: 400 ALVLFENMQKSEIELD-------ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRIL 126
SY +ISGFCR R+ K+ L +M E +L
Sbjct: 453 SYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 132/332 (39%), Gaps = 70/332 (21%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS------------------------- 56
SL+N +C G S+ L DQM+ G PD VT +
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 57 ---PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA 113
P LVTY A+I G C G + AL +L M + + D V Y+ VI C+ R A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 114 YELKMEMDEKRILRMEEVVYESLMQGLSD----EDA------------------YSSLMN 151
L EMD K I R + Y SL+ L + DA ++SL++
Sbjct: 260 LNLFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
+ +G + +A L E+ VT + ING R EA++I M+S CL
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 212 KTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNF 270
TY+ LI C + +EL + RGLV + T++HG F
Sbjct: 379 DV--VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV-TYTTLIHG----------F 425
Query: 271 LIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
C D A ++ +MV G P++ +
Sbjct: 426 FQASDC-----DNAQMVFKQMVSDGVHPNIMT 452
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 135/299 (45%), Gaps = 47/299 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML R ++P+ T++SL I+A+ G+ + L D+MI + P++V
Sbjct: 301 MLERKINPNVVTFNSL-------IDAFAKEGKLIEAEKLFDEMIQRSI-------DPNIV 346
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI G+C R++EA I M PD V+YN +I+GFC+ ++ EL +M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+R L V Y +L+ G + D + A ++ +++ DG +T
Sbjct: 407 -SRRGLVGNTVTYTTLIHG-------------FFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
+ ++GL K + +A ++ + S + + TY+ + E C + + +L
Sbjct: 453 YNTLLDGLCKNGKLEKAM-VVFEYLQKSKMEPDIY-TYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
++G+ KPD YN +I C+ ++AY ++ +M G +P
Sbjct: 511 LSLKGV----------------KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 125/311 (40%), Gaps = 47/311 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +IN C + S + +M+ G PS+VT N+L+ G+C R+ EA
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGY-------GPSIVTLNSLLNGFCHGNRISEA 154
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ ++ M EMG PD V++ ++ G + + +A L M K + + V Y +++
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVTYGAVIN 213
Query: 139 GL----------------------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
GL +D YS++++ ++ A L E+ + G
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+ T S I+ L R +A +L M +E N + L
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDM-----------------LERKINPNVVTFNSL 316
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+ F G + EA + D M+ + P+ YN LI C +D+A ++T MV
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 297 VPHMFSVLALI 307
+P + + LI
Sbjct: 377 LPDVVTYNTLI 387
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 31/251 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS+V ++ L+ + + + + M +G+S + +YNI+I+ CR + A +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+ +M ++ Y + L +SL+N + + +A L ++ GY
Sbjct: 123 --------LGKMMKLGYGPSIVTL------NSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
++VT + ++GL + + EA ++ M+ C + TY A+I
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGC--QPDLVTYGAVIN------------- 213
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
G RG A + M G + D +Y+ +I C+ ++VD A N++T M + G
Sbjct: 214 --GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 297 VPHMFSVLALI 307
P +F+ +LI
Sbjct: 272 RPDVFTYSSLI 282
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 134/325 (41%), Gaps = 56/325 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD T+++L + F A S+ L D+M+ G PD LV
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRA-------SEAVALVDRMVVKGCQPD-------LV 222
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY ++ G C G ++ AL +L+ M + + P V YN +I C + A L EM
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 121 DEKRILRMEEVVYESLMQGLSD----EDA------------------YSSLMNDYLAQGD 158
D K I R V Y SL++ L + DA +S+L++ ++ +G
Sbjct: 283 DNKGI-RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+ +A L E+ + T S ING R EAK + MIS C TY
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV--VTY 399
Query: 219 DALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
+ LI+ C +EL + RGLV + T++HG F C
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV-TYTTLIHG----------FFQAREC- 447
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFS 302
D A ++ +MV G +P + +
Sbjct: 448 ----DNAQIVFKQMVSDGVLPDIMT 468
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 137/304 (45%), Gaps = 52/304 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R ++P+ T+S+L I+A+ G+ + L+D+MI + PD +
Sbjct: 317 MIERKINPNVVTFSAL-------IDAFVKEGKLVEAEKLYDEMIKRSIDPD-------IF 362
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++LI G+C R++EA + M P+ V+YN +I GFC+ + + EL EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++ ++ + Y++L++ + + + A I+ +++ DG L + +T
Sbjct: 423 SQRGLV--------------GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNE-------FKS 232
S+ ++GL + E ++ + S + +T Y+ +IE C + F S
Sbjct: 469 YSILLDGLCNNGKV-ETALVVFEYLQRSKMEPDIYT-YNIMIEGMCKAGKVEDGWDLFCS 526
Query: 233 L------------VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L ++ GF +GL EA M PD G YN LI H R +
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR--D 584
Query: 281 VDKA 284
DKA
Sbjct: 585 GDKA 588
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 128/330 (38%), Gaps = 50/330 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LIN +C + S + +M+ G PD +VT N+L+ G+C R+ +A
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPD-------IVTLNSLLNGFCHGNRISDA 170
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ ++ M EMG PD+ ++N +I G R +A L M K + + V Y ++
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC-QPDLVTYGIVVN 229
Query: 139 GL---SDEDAYSSLMNDYLAQGDMEKAYI--------------------LDREIAHDGYL 175
GL D D SL+ + QG +E + L E+ + G
Sbjct: 230 GLCKRGDIDLALSLLKK-MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT------------------HTT 217
VT + I L R +A +L MI
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 218 YDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
YD +I+ + + + L+ GF M + EA + M+ + P+ YN LI C+
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
K VD+ ++ M G V + + LI
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 31/251 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS+V ++ L+ + + + + + M +G+S + +Y+I+I+ FCR + A +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+ +M ++ YE D +SL+N + + A L ++ GY
Sbjct: 139 --------LAKMMKLGYE------PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+S T + I+GL + R EA ++ M+ C + TY +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC--QPDLVTYGI---------------V 227
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
V G RG + A M G +P +YN +I C KNV+ A N++T M + G
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 297 VPHMFSVLALI 307
P++ + +LI
Sbjct: 288 RPNVVTYNSLI 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 49/216 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M RGL + TY++L + +F E + QM+ +GVLPD +T S
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQ-------ARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P + TYN +I G C G+VE+ + + G+ P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ V+Y ++SGFCR +A L EM E+ L D Y++L+
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEE--------------GPLPDSGTYNTLIRA 580
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
+L GD + L RE+ ++ ++ T + N L
Sbjct: 581 HLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 109/281 (38%), Gaps = 56/281 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSP--- 57
M+ R + PD TYSSL IN +C+ + ++ + MI P+ VT +
Sbjct: 352 MIKRSIDPDIFTYSSL-------INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 58 -------------------------SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ VTY LI+G+ + A + + M G+ P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED--AYSSLM 150
D ++Y+I++ G C GK + VV+E L + + D Y+ ++
Sbjct: 465 DIMTYSILLDGLC---NNGK-------------VETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 151 NDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL 210
G +E + L ++ G VT + ++G +K EA + M L
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 211 SKTTHTTYDALIE-NCSNNEFKSLVELVKGFRMRGLVSEAA 250
+ TY+ LI + + + + EL++ R V +A+
Sbjct: 569 PDS--GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 607
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 143/319 (44%), Gaps = 54/319 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R ++P+ T+S+L I+A+ G+ + L+D+MI + PD +
Sbjct: 316 MIERKINPNVVTFSAL-------IDAFVKEGKLVEAEKLYDEMIKRSIDPD-------IF 361
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++LI G+C R++EA + M P+ V+YN +I GFC+ + + EL EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ R L V Y +L+QGL GD + A + +++ DG + +T
Sbjct: 422 SQ-RGLVGNTVTYNTLIQGL-------------FQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNE-------FKS 232
S+ ++GL K + +A ++ + S + + TY+ +IE C + F S
Sbjct: 468 YSILLDGLCKYGKLEKAL-VVFEYLQKSKMEPDIY-TYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 233 L------------VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L ++ GF +GL EA M P+ G YN LI R ++
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI--RARLRD 583
Query: 281 VDKAYN--MYTRMVHYGFV 297
DKA + + M GFV
Sbjct: 584 GDKAASAELIKEMRSCGFV 602
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 132/353 (37%), Gaps = 77/353 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------ 54
M+ G PD T SSL +N YC G S+ L DQM P+ VT
Sbjct: 141 MMKLGYEPDIVTLSSL-------LNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 55 ----------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P L TY ++ G C G ++ AL +L+ M + +
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD----EDA--- 145
D V Y +I C + A L EMD K I R V Y SL++ L + DA
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI-RPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 146 ---------------YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
+S+L++ ++ +G + +A L E+ + T S ING
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEA 249
R EAK + MIS C TY+ LI+ C + +EL + RGLV
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNV--VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 250 ARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
YN LI + + D A ++ +MV G P + +
Sbjct: 431 V----------------TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 144/358 (40%), Gaps = 77/358 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNA----------------------------YFSLINAYCLGGE 32
M+ RG PD TY ++ N Y ++I+A C
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ NL +M + G+ P++VTYN+LI C GR +A +L M E ++P
Sbjct: 271 VNDALNLFTEMDNKGI-------RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED--AYSSLM 150
+ V+++ +I F + GK E E +Y+ +++ D D YSSL+
Sbjct: 324 NVVTFSALIDAFVK---EGKLVE-------------AEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 151 NDYLAQGDMEKA-YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSC 209
N + +++A ++ + I+ D + VT + I G K R E E+ M
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 210 LSKTTHTTYDALIE------NC--SNNEFKSLVE------------LVKGFRMRGLVSEA 249
+ T TY+ LI+ +C + FK +V L+ G G + +A
Sbjct: 427 VGNTV--TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 250 ARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + +PD YN +I C+ V+ ++++ + G P++ +I
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 125/335 (37%), Gaps = 60/335 (17%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---------------------- 56
+Y LIN +C + + +M+ G PD VT S
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 57 ------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
P+ VT+N LI+G + EA+ ++ M G PD +Y V++G C+ +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 111 GKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIA 170
A L +M++ +I + V+Y +++ L + + +N L E+
Sbjct: 237 DLALSLLKKMEKGKI-EADVVIYTTIIDALCNYKNVNDALN-------------LFTEMD 282
Query: 171 HDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT---------------- 214
+ G VT + I L R +A +L MI
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 215 --HTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
YD +I+ + + + L+ GF M + EA + M+ + P+ YN LI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 273 VEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C+ K V++ ++ M G V + + LI
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 31/251 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS+V +N L+ + + + + + M + +S D SYNI+I+ FCR + A +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+ +M ++ YE D SSL+N Y + +A L ++ Y
Sbjct: 138 --------LGKMMKLGYE------PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+VT + I+GL + EA ++ M++ C + TY +
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGC--QPDLFTYGT---------------V 226
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
V G RG + A M G + D +Y +I C KNV+ A N++T M + G
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 297 VPHMFSVLALI 307
P++ + +LI
Sbjct: 287 RPNVVTYNSLI 297
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 120/296 (40%), Gaps = 49/296 (16%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
S L +YN LI +C ++ AL +L M ++G PD V+ + +++G+C + +A
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 171
Query: 116 LKMEMDEKRILRME--EVVYESLMQGL----------------------SDEDAYSSLMN 151
L +D+ ++ + V + +L+ GL D Y +++N
Sbjct: 172 L---VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
+GD++ A L +++ ++ V + I+ L +A + M +
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI-- 286
Query: 212 KTTHTTYDAL--------------------IENCSNNEFKSLVELVKGFRMRGLVSEAAR 251
+ TY++L IE N + L+ F G + EA +
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 252 AHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+D M+ + PD Y+ LI C +D+A +M+ M+ P++ + LI
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 41/282 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD T+++L + F L + S+ L DQM+ G PD LV
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLF-------LHNKASEAVALVDQMVQRGCQPD-------LV 224
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY ++ G C G ++ AL +L M + + V +N +I C+ R A +L EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 121 DEKRILRMEEVVYESLMQGLSD----EDA------------------YSSLMNDYLAQGD 158
+ K I R V Y SL+ L + DA +++L++ + +G
Sbjct: 285 ETKGI-RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+ +A L E+ +++T ++ ING R EAK++ M+S CL TY
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI--QTY 401
Query: 219 DALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+ LI C + VEL + RGLV + T++ G
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTV-TYTTIIQG 442
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 130/312 (41%), Gaps = 43/312 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + ++P+ T+++L +A+F G+ + LH++MI + PD +
Sbjct: 319 MLEKKINPNVVTFNALIDAFFK-------EGKLVEAEKLHEEMIQRSIDPD-------TI 364
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI G+C R++EA + + M P+ +YN +I+GFC+ + EL EM
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ R L V Y +++QG + GD + A ++ +++ + ++ +T
Sbjct: 425 SQ-RGLVGNTVTYTTIIQG-------------FFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 181 ESVFINGLSKKARTREAKEILL---------------SMISNSCLSKTTHTTYDALIENC 225
S+ ++GL + A I +MI C + +D
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS 530
Query: 226 SNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAY 285
+ + ++ G + L+ EA M P+ G YN LI + R + +
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590
Query: 286 NMYTRMVHYGFV 297
+ M GFV
Sbjct: 591 ELIKEMRSSGFV 602
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 135/325 (41%), Gaps = 54/325 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+S D TYS IN +C + S + +M+ G PD +VT ++
Sbjct: 113 GISHDLYTYSIF-------INCFCRRSQLSLALAVLAKMMKLGYEPD-------IVTLSS 158
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ GYC R+ +A+ ++ M EMG PD ++ +I G + +A L +M +R
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM-VQR 217
Query: 125 ILRMEEVVYESLMQGL---SDEDAYSSLMN------------------DYLAQ-GDMEKA 162
+ + V Y +++ GL D D +L+N D L + +E A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
L E+ G VT + IN L R +A +L +M+ T++ALI
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI--NPNVVTFNALI 335
Query: 223 ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
+ F G + EA + H+ M+ + PD YN LI C +D
Sbjct: 336 D---------------AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 283 KAYNMYTRMVHYGFVPHMFSVLALI 307
+A M+ MV +P++ + LI
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLI 405
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHN------------GVLPDFVTGSP--SLVTYNA 64
++F+L + C F+ S + +++ N + D V P S+V +N
Sbjct: 29 SFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNK 88
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ + + E + + M +G+S D +Y+I I+ FCR + A +
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV-------- 140
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
+ +M ++ YE D SSL+N Y + A L ++ GY ++ T +
Sbjct: 141 LAKMMKLGYE------PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL 194
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
I+GL + EA ++ M+ C + TY +V G RG
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGC--QPDLVTYGT---------------VVNGLCKRG 237
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
+ A + M K + ++N +I C+ ++V+ A +++T M G P++ +
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 305 ALI 307
+LI
Sbjct: 298 SLI 300
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 128/302 (42%), Gaps = 48/302 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + ++P+ T FNA LI+A+ G+F + LHD MI + PD +
Sbjct: 246 MIEKKINPNLVT----FNA---LIDAFVKEGKFVEAEKLHDDMIKRSIDPD-------IF 291
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI G+C R+++A + M PD +YN +I GFC+ + EL EM
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
R L + V Y +L+QGL GD + A + +++ DG + +T
Sbjct: 352 SH-RGLVGDTVTYTTLIQGL-------------FHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 181 ESVFINGLSKKARTREAKEIL---------------LSMISNSCLSKTTHTTYDALIENC 225
S+ ++GL + +A E+ +MI C + +D
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 226 SNNEFKSLV---ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
++V ++ G + L+ EA M PD G YN LI H R + D
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR--DGD 515
Query: 283 KA 284
KA
Sbjct: 516 KA 517
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 127/306 (41%), Gaps = 43/306 (14%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
SL+N YC G S L DQM+ G PD +T+ LI+G + EA+ +
Sbjct: 85 SLLNGYCHGKRISDAVALVDQMVEMGYRPD-------TITFTTLIHGLFLHNKASEAVAL 137
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
+ M + G P+ V+Y +V++G C+ + A+ L +M+ +I + V++ +++ L
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI-EADVVIFNTIIDSLC 196
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
+N L +E+ G VT S I+ L R +A ++L
Sbjct: 197 KYRHVDDALN-------------LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 202 LSMISNSCLSKTTHTTYDALI------------ENCSNNEFKSLVE--------LVKGFR 241
MI T++ALI E ++ K ++ L+ GF
Sbjct: 244 SDMIEKKI--NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 242 MRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMF 301
M + +A + + M+ + PD YN LI C+ K V+ ++ M H G V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 302 SVLALI 307
+ LI
Sbjct: 362 TYTTLI 367
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 125/311 (40%), Gaps = 47/311 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LIN +C + S L +M+ G PS+VT ++L+ GYC R+ +A
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGY-------EPSIVTLSSLLNGYCHGKRISDA 99
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ ++ M EMG PD +++ +I G + +A L M +R + V Y ++
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVN 158
Query: 139 GL----------------------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
GL +D ++++++ ++ A L +E+ G
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
VT S I+ L R +A ++L MI T++ALI+
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI--NPNLVTFNALID------------- 263
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
F G EA + HD M+ + PD YN LI C +DKA M+ MV
Sbjct: 264 --AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 297 VPHMFSVLALI 307
P + + LI
Sbjct: 322 FPDLDTYNTLI 332
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 31/251 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS+ +N L+ + + + + + M +G+S + +YNI+I+ FCR + A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+ +M ++ YE + L SSL+N Y + A L ++ GY
Sbjct: 68 --------LGKMMKLGYEPSIVTL------SSLLNGYCHGKRISDAVALVDQMVEMGYRP 113
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+++T + I+GL + EA ++ M+ C + TY +
Sbjct: 114 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGC--QPNLVTYGV---------------V 156
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
V G RG + A + M + D ++N +I C+ ++VD A N++ M G
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Query: 297 VPHMFSVLALI 307
P++ + +LI
Sbjct: 217 RPNVVTYSSLI 227
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 72/263 (27%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R + PD TY+SL IN +C+ K + + M+ PD L
Sbjct: 281 MIKRSIDPDIFTYNSL-------INGFCMHDRLDKAKQMFEFMVSKDCFPD-------LD 326
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGL------------------------------ 90
TYN LI G+C RVE+ + R M GL
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 91 -----SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED- 144
PD ++Y+I++ G C + KA E+ M +K ++++ +Y ++++G+
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 145 ---------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
Y+++++ ++ +++AY L +++ DG L +S T +
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 505
Query: 184 FINGLSKKARTREAKEILLSMIS 206
I + + E++ M S
Sbjct: 506 LIRAHLRDGDKAASAELIREMRS 528
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 83/216 (38%), Gaps = 49/216 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSP--- 57
M RGL D TY++L F G+ + QM+ +GV PD +T S
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFH-------DGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 58 -------------------------SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ Y +I G C G+V++ + + G+ P
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ V+YN +ISG C R +AY L +M E L D Y++L+
Sbjct: 464 NVVTYNTMISGLCSKRLLQEAYALLKKMKED--------------GPLPDSGTYNTLIRA 509
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
+L GD + L RE+ ++ ++ T + N L
Sbjct: 510 HLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 38/285 (13%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L+N +C + S+ +M+ G PD +VT+ +LI G+C R+EEA+ ++
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPD-------IVTFTSLINGFCLGNRMEEAMSMV 165
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M EMG+ PD V Y +I C+ A L +M+ I R + V+Y SL+ GL +
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGI-RPDVVMYTSLVNGLCN 224
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
+ D L +G + R+I D +T + I+ K+ + +A+E+
Sbjct: 225 SGRWRDA--DSLLRG------MTKRKIKPD-----VITFNALIDAFVKEGKFLDAEELYN 271
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
MI S TY +LI GF M G V EA + M
Sbjct: 272 EMIRMSIAPNI--FTYTSLIN---------------GFCMEGCVDEARQMFYLMETKGCF 314
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD Y LI C+CK VD A ++ M G + + LI
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 148/379 (39%), Gaps = 81/379 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ G PD T++SL IN +CLG + ++ +QM+ G+ PD V +
Sbjct: 133 MMKLGFEPDIVTFTSL-------INGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P +V Y +L+ G C GR +A +LRGM + + P
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDE----KRILRMEEVVYESLMQGLSDED---- 144
D +++N +I F + + A EL EM I ++ M+G DE
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 145 -------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKK 191
AY+SL+N + ++ A + E++ G ++T + I G +
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 192 ARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGL--VSE 248
+ A+E+ M+S TY+ L+ C N + K + + + + R + V+
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIR--TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 249 AARAHDTMLHG---NHKPDGGVYNFLIVEH-----------------CRCKNVDKAYNMY 288
++ +LHG N K + + F + C+ V A N++
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 289 TRMVHYGFVPHMFSVLALI 307
+ G P++ + +I
Sbjct: 484 CSLPSKGVKPNVVTYTTMI 502
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 38/285 (13%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
LI+ +C S ++ +M+ G PS+VT+ +L++G+C + R+ +A ++
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGY-------EPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M + G P+ V YN +I G C+ E A EL EM EK+ L + V Y +L+ GL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM-EKKGLGADVVTYNTLLTGL-- 221
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
YS +D A + R++ + VT + I+ K+ EA+E+
Sbjct: 222 --CYSGRWSD---------AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
MI +S + TY+++I G M G + +A + D M
Sbjct: 271 EMIQSSV--DPNNVTYNSII---------------NGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P+ YN LI C+ + VD+ ++ RM GF +F+ LI
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 105/262 (40%), Gaps = 50/262 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------ 54
M+ + P+ TY+S+ IN C+ G D M G P+ VT
Sbjct: 272 MIQSSVDPNNVTYNSI-------INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324
Query: 55 ----------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ + TYN LI+GYC +G++ AL I M ++P
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D +++ I++ G C E A +M E + V Y ++ GL D
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKY-IGIVAYNIMIHGLCKAD-------- 435
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
+EKA+ L + +G ++ T ++ I GL K REA E++ M + +
Sbjct: 436 -----KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQ 490
Query: 213 TTHTTYDALIENCSNNEFKSLV 234
+ D L E+ S+N+ SLV
Sbjct: 491 -MNAEDDHLEEHSSSNKEISLV 511
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 143/327 (43%), Gaps = 50/327 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G+ PD TYS Y LI+ CL G+ S+ D + H G + +
Sbjct: 568 MTEKGIVPD--TYS-----YRPLIHGLCLTGQASEAKVFVDGL-HKG------NCELNEI 613
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y L++G+C G++EEAL + + M + G+ D V Y ++I G + ++ + L EM
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ R L+ ++V+Y S++ DA S GD ++A+ + + ++G + VT
Sbjct: 674 HD-RGLKPDDVIYTSMI------DAKSK-------TGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNE----------- 229
+ INGL K EA+ + M S S TY ++ + E
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVS--SVPNQVTYGCFLDILTKGEVDMQKAVELHN 777
Query: 230 --FKSLVE-------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
K L+ L++GF +G + EA+ M+ PD Y +I E CR +
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
V KA ++ M G P + LI
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLI 864
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 150/387 (38%), Gaps = 95/387 (24%)
Query: 6 LSPDEGTYSSLFN--------AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSP 57
+S EG + + N Y SL+ YC G+ +K L+ +M G+ +P
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI-------AP 505
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
S+ T+ L+ G G + +A+ + M E + P+ V+YN++I G+C + KA+E
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 118 MEMDEKRILRMEEVVYESLMQGLS----------------------DEDAYSSLMNDYLA 155
EM EK I+ + Y L+ GL +E Y+ L++ +
Sbjct: 566 KEMTEKGIVP-DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFIN------------GLSKKARTREAKE---I 200
+G +E+A + +E+ G + V V I+ GL K+ R K I
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 201 LLSMI---SNSCLSKTTHTTYDALI-ENCSNNEFKSLVELVKGFRMRGLVSE-------- 248
SMI S + K +D +I E C NE + ++ G G V+E
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV-TYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 249 ----------------------------AARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
A H+ +L G + YN LI CR
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG-LLANTATYNMLIRGFCRQGR 802
Query: 281 VDKAYNMYTRMVHYGFVPHMFSVLALI 307
+++A + TRM+ G P + +I
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMI 829
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 129/307 (42%), Gaps = 44/307 (14%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
D G +LF Y +LI++ C G +F + L D+M G+ P+ VTY+ LI
Sbjct: 360 DFGVSPNLF-VYNALIDSLCKGRKFHEAELLFDRMGKIGL-------RPNDVTYSILIDM 411
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
+C G+++ AL L M + GL YN +I+G C+ + A EM K ++
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK---KL 468
Query: 129 EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
E V Y+SLM Y ++G + KA L E+ G T + ++GL
Sbjct: 469 EPTVV-----------TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 189 SKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLV- 246
+ R+A ++ M + K TY+ +IE C + E +K +G+V
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNV--KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 247 ------------------SEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
SEA D + GN + + Y L+ CR +++A ++
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 289 TRMVHYG 295
MV G
Sbjct: 636 QEMVQRG 642
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 122/307 (39%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML SP E SSL G+ + NL +++ GV SP+L
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRK-------RGKIEEALNLVKRVVDFGV-------SPNLF 368
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YNALI C + EA + M ++GL P+ V+Y+I+I FCR + A EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ ++ VY Y+SL+N + GD+ A E+ + VT
Sbjct: 429 VDTG---LKLSVY-----------PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ + G K + +A + M ++ + +T L+ G
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKG-IAPSIYT----------------FTTLLSGL 517
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
GL+ +A + + M N KP+ YN +I +C ++ KA+ M G VP
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 301 FSVLALI 307
+S LI
Sbjct: 578 YSYRPLI 584
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 31/184 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFS--LIN-AYCLGGEFSKVSNLHDQM-------------- 43
M+ G P+E TY+++ N +N A L + VS++ +Q+
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV 767
Query: 44 -------IHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
+HN +L + + TYN LI G+C GR+EEA ++ M G+SPD ++
Sbjct: 768 DMQKAVELHNAILKGLLANT---ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL---SDEDAYSSLMNDY 153
Y +I+ CR + KA EL M EK I R + V Y +L+ G + + L N+
Sbjct: 825 YTTMINELCRRNDVKKAIELWNSMTEKGI-RPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Query: 154 LAQG 157
L QG
Sbjct: 884 LRQG 887
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 130/328 (39%), Gaps = 52/328 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G+ PD Y+ + I + C + S+ + M G ++V
Sbjct: 218 MVSVGIRPDVYIYTGV-------IRSLCELKDLSRAKEMIAHMEATGC-------DVNIV 263
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME- 119
YN LI G C +V EA+GI + + L PD V+Y ++ G C+++E +E+ +E
Sbjct: 264 PYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE----FEIGLEM 319
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
MDE LR E A SSL+ +G +E+A L + + G
Sbjct: 320 MDEMLCLRFS-----------PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLV---- 234
+ I+ L K + EA E+L + L + TY LI+ C + + +
Sbjct: 369 VYNALIDSLCKGRKFHEA-ELLFDRMGKIGL-RPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 235 ---------------ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
L+ G G +S A M++ +P Y L+ +C
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 280 NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++KA +Y M G P +++ L+
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLL 514
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 31/243 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P + T +AL++G A+ + M +G+ PD Y VI C +++ +A E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
M E + V Y L+ GL + + +A + +++A
Sbjct: 250 IAHM-EATGCDVNIVPYNVLIDGLCKKQK-------------VWEAVGIKKDLAGKDLKP 295
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+ VT + GL K E++ M+ CL + ++ L
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEML---CLRFSPSEA--------------AVSSL 338
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
V+G R RG + EA ++ P+ VYN LI C+ + +A ++ RM G
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 297 VPH 299
P+
Sbjct: 399 RPN 401
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 132/308 (42%), Gaps = 50/308 (16%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +L+++ G ++ L+ +M+ + V SP + T+N L+ GYC LG V EA
Sbjct: 122 CYNNLLSSLARFGLVEEMKRLYTEMLEDLV-------SPDIYTFNTLVNGYCKLGYVVEA 174
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ + + G PD +Y I+G CR +E A+++ EM + R EV Y L+
Sbjct: 175 KQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHR-NEVSYTQLIY 233
Query: 139 GL----------------SDEDA------YSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
GL D++ Y+ L++ G +A L ++++ G
Sbjct: 234 GLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP 293
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVE 235
+ +V I EA +L M+ N + TY+ALI+ C N K++
Sbjct: 294 DDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNV--ITYNALIKGFCKKNVHKAM-- 349
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
GL+S+ ML N PD YN LI C N+D AY + + M G
Sbjct: 350 --------GLLSK-------MLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESG 394
Query: 296 FVPHMFSV 303
VP+ +V
Sbjct: 395 LVPNQRTV 402
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 118/266 (44%), Gaps = 37/266 (13%)
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
YN L+ G VEE + M E +SPD ++N +++G+C++ G E K
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKL---GYVVEAK---- 175
Query: 122 EKRILRMEEVVYESLMQGLSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+ V + L+Q D D Y+S + + + +++ A+ + +E+ +G V
Sbjct: 176 -------QYVTW--LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEV 226
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLS--KTTHTTYDALIENCSNNE----FKSL 233
+ + I GL + + EA +L+ M ++C +T DAL + +E FK +
Sbjct: 227 SYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM 286
Query: 234 VE------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
E L++ F + EA+ + ML P+ YN LI C+ KNV
Sbjct: 287 SESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNV 345
Query: 282 DKAYNMYTRMVHYGFVPHMFSVLALI 307
KA + ++M+ VP + + LI
Sbjct: 346 HKAMGLLSKMLEQNLVPDLITYNTLI 371
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 98/252 (38%), Gaps = 38/252 (15%)
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEK----------RILRMEEV--VYESLMQ 138
S ++V + + FCR G ++E+K ++ K R +EE+ +Y +++
Sbjct: 89 SCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLE 148
Query: 139 GLSDEDAYS--SLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
L D Y+ +L+N Y G + +A + G + T + FI G ++
Sbjct: 149 DLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDA 208
Query: 197 AKEILLSMISNSCLSKTTHTTYDALI---------------------ENCSNNEFKSLVE 235
A ++ M N C +Y LI +NC N ++
Sbjct: 209 AFKVFKEMTQNGC--HRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPN-VRTYTV 265
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
L+ G SEA M KPD +Y LI C +D+A + M+ G
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENG 325
Query: 296 FVPHMFSVLALI 307
+P++ + ALI
Sbjct: 326 LMPNVITYNALI 337
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 129/337 (38%), Gaps = 70/337 (20%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS------------------------- 56
SL+N YC G S L DQM+ G PD +T +
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 57 ---PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA 113
P+LVTY ++ G C G ++ A +L M + + V Y+ VI C+ R A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 114 YELKMEMDEKRILRMEEVVYESLMQGLSDEDAYS----------------------SLMN 151
L EM+ K + R + Y SL+ L + + +S +L++
Sbjct: 280 LNLFTEMENKGV-RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
++ +G + +A L E+ + T S ING R EAK + MIS C
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 212 KTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNF 270
TY+ LI C VEL + RGLV + T++HG F
Sbjct: 399 NV--VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV-TYTTLIHG----------F 445
Query: 271 LIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C D A ++ +MV G P++ + L+
Sbjct: 446 FQARDC-----DNAQMVFKQMVSDGVHPNIMTYNTLL 477
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 139/299 (46%), Gaps = 47/299 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R ++P+ T FNA LI+A+ G+ + L+D+MI + PD +
Sbjct: 321 MIERKINPNVVT----FNA---LIDAFVKEGKLVEAEKLYDEMIKRSIDPD-------IF 366
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++LI G+C R++EA + M P+ V+YN +I+GFC+ + + EL EM
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++ + + + Y++L++ + D + A ++ +++ DG +T
Sbjct: 427 SQRGL--------------VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
+ ++GL K + +A ++ + S + T + TY+ +IE C + + +L
Sbjct: 473 YNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIY-TYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
++G+ KPD +YN +I CR ++A ++ +M G +P
Sbjct: 531 LSLKGV----------------KPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 130/329 (39%), Gaps = 48/329 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LIN +C + S L +M+ G PS+VT ++L+ GYC R+ +A
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGY-------EPSIVTLSSLLNGYCHGKRISDA 174
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ ++ M EMG PD +++ +I G + +A L M +R + V Y ++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVN 233
Query: 139 GL---SDED-------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
GL D D YS++++ + A L E+ + G
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMIS----------NSCLSK--------TTHTTY 218
+T S I+ L R +A +L MI N+ + Y
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
D +I+ + + + L+ GF M + EA + M+ + P+ YN LI C+
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 279 KNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
K +D+ ++ M G V + + LI
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 109/251 (43%), Gaps = 31/251 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS+ +N L+ + + + + + M +G+S + +YNI+I+ FCR + A L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+ +M ++ YE + L SSL+N Y + A L ++ GY
Sbjct: 143 --------LGKMMKLGYEPSIVTL------SSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+++T + I+GL + EA ++ M+ C + TY +
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGC--QPNLVTYGV---------------V 231
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
V G RG + A + M + + +Y+ +I C+ ++ D A N++T M + G
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 297 VPHMFSVLALI 307
P++ + +LI
Sbjct: 292 RPNVITYSSLI 302
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 31/251 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS+VT +L+ G+C R +EA+ ++ M G P+ V YN VI+G C+ R+ A E+
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
M EK+ +R + V Y +L+ GLS+ G A L R++
Sbjct: 207 FYCM-EKKGIRADAVTYNTLISGLSN-------------SGRWTDAARLLRDMVKRKIDP 252
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+ + I+ K+ EA+ + MI S + TY++LI
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV--FTYNSLIN------------- 297
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
GF + G + +A D M+ PD YN LI C+ K V+ ++ M + G
Sbjct: 298 --GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 297 VPHMFSVLALI 307
V F+ LI
Sbjct: 356 VGDAFTYNTLI 366
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 49/232 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R + P+ TY+SL IN +C+ G + D M+ G PD VT + +
Sbjct: 280 MIRRSVVPNVFTYNSL-------INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332
Query: 61 ----------------------------TYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
TYN LI+GYC G++ A + M + G+SP
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D V+YNI++ C + KA + ++ +K + ++ + Y ++QGL D
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDL-QKSEMDVDIITYNIIIQGLCRTDK------- 444
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+++A+ L R + G +++ I+GL +K REA ++ M
Sbjct: 445 ------LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 121/284 (42%), Gaps = 48/284 (16%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
+ +LI+ + G + NL+ +MI V+P+ + TYN+LI G+C G + +A
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPN-------VFTYNSLINGFCIHGCLGDAK 309
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M G PD V+YN +I+GFC+ + +L EM Y+ L
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-----------TYQGL--- 355
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
+ D Y++L++ Y G + A + + G + VT ++ ++ L + +A
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA-- 413
Query: 200 ILLSMISNSCLSKTTH----TTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
L M+ + L K+ TY+ +I+ C ++ K L + +G+
Sbjct: 414 --LVMVED--LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV--------- 460
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
KPD Y +I CR +A + RM GF+P
Sbjct: 461 -------KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M ++GL D TY++L I+ YC G+ + + ++M+ GV PD VT +
Sbjct: 350 MTYQGLVGDAFTYNTL-------IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
++TYN +I G C +++EA + R + G+ P
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSL 149
DA++Y +ISG CR +A +L M E + E + E+L D Y+SL
Sbjct: 463 DAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL------RDHYTSL 513
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 129/302 (42%), Gaps = 48/302 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + ++P+ T FNA LI+A+ G+F + L+D MI + PD +
Sbjct: 321 MIEKKINPNLVT----FNA---LIDAFVKEGKFVEAEKLYDDMIKRSIDPD-------IF 366
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+L+ G+C R+++A + M PD V+YN +I GFC+ + EL EM
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
R L + V Y +L+QGL GD + A + +++ DG + +T
Sbjct: 427 SH-RGLVGDTVTYTTLIQGL-------------FHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 181 ESVFINGLSKKARTREAKEIL---------------LSMISNSCLSKTTHTTYDALIENC 225
S+ ++GL + +A E+ +MI C + +D
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 226 SNNEFKSLV---ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
++V ++ G + L+ EA M P+ G YN LI H R + D
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR--DGD 590
Query: 283 KA 284
KA
Sbjct: 591 KA 592
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 129/332 (38%), Gaps = 70/332 (21%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS------------------------- 56
SL+N YC G S L DQM+ G PD +T +
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 57 ---PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA 113
P+LVTY ++ G C G + AL +L M + D V +N +I C+ R A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279
Query: 114 YELKMEMDEKRILRMEEVVYESLMQGLSDEDAYS---SLMNDY--------------LAQ 156
L EM+ K I R V Y SL+ L +S L++D L
Sbjct: 280 LNLFKEMETKGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVF-----INGLSKKARTREAKEILLSMISNSCLS 211
+++ ++ E +D + S+ +F +NG R +AK++ M+S C
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 212 KTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNF 270
TY+ LI+ C + + EL + RGLV + + T++ G DG
Sbjct: 399 DVV--TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV-TYTTLIQGLFH-DG----- 449
Query: 271 LIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+ D A ++ +MV G P + +
Sbjct: 450 ---------DCDNAQKVFKQMVSDGVPPDIMT 472
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 133/329 (40%), Gaps = 48/329 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LIN +C + S L +M+ G PS+VT ++L+ GYC R+ +A
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGY-------EPSIVTLSSLLNGYCHGKRISDA 174
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ ++ M EMG PD +++ +I G + +A L M +R + V Y ++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVN 233
Query: 139 GL---SDEDAYSSLMNDYLA---QGD----------------MEKAYILDREIAHDGYLS 176
GL D D +L+N A + D ++ A L +E+ G
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMIS----------NSCLSK--------TTHTTY 218
VT S I+ L R +A ++L MI N+ + Y
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
D +I+ + + + LV GF M + +A + + M+ + PD YN LI C+
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 279 KNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
K V+ ++ M H G V + LI
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 103/263 (39%), Gaps = 72/263 (27%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R + PD TY+SL +N +C+ K + + M+ PD +V
Sbjct: 356 MIKRSIDPDIFTYNSL-------VNGFCMHDRLDKAKQMFEFMVSKDCFPD-------VV 401
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGL------------------------------ 90
TYN LI G+C RVE+ + R M GL
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 91 -----SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED- 144
PD ++Y+I++ G C + KA E+ M + I +++ +Y ++++G+
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI-KLDIYIYTTMIEGMCKAGK 520
Query: 145 ---------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
Y+++++ ++ +++AY L +++ DG L S T +
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 580
Query: 184 FINGLSKKARTREAKEILLSMIS 206
I + + E++ M S
Sbjct: 581 LIRAHLRDGDKAASAELIREMRS 603
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 31/251 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS+V +N L+ + + + + + M + + +YNI+I+ FCR + A L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+ +M ++ YE + L SSL+N Y + A L ++ GY
Sbjct: 143 --------LGKMMKLGYEPSIVTL------SSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+++T + I+GL + EA ++ M+ C + TY +
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGC--QPNLVTYGV---------------V 231
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
V G RG A + M + D ++N +I C+ ++VD A N++ M G
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 297 VPHMFSVLALI 307
P++ + +LI
Sbjct: 292 RPNVVTYSSLI 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 83/216 (38%), Gaps = 49/216 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSP--- 57
M RGL D TY++L F G+ + QM+ +GV PD +T S
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFH-------DGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 58 -------------------------SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ Y +I G C G+V++ + + G+ P
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ V+YN +ISG C R +AY L +M E L + Y++L+
Sbjct: 539 NVVTYNTMISGLCSKRLLQEAYALLKKMKED--------------GPLPNSGTYNTLIRA 584
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
+L GD + L RE+ ++ ++ T + N L
Sbjct: 585 HLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 135/338 (39%), Gaps = 72/338 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ G PD T +SL +N +C G S L DQM+ G PD VT +
Sbjct: 139 MMKLGYEPDIVTLNSL-------LNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH 191
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P LVTY A++ G C G + AL +L M +
Sbjct: 192 GLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEA 251
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSS---L 149
+ V Y+ VI C+ R A L EM+ K + R + Y SL+ L + +S L
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV-RPNVITYSSLISCLCNYGRWSDASRL 310
Query: 150 MNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSC 209
++D +++R+I + VT S I+ KK + +A+++
Sbjct: 311 LSD-----------MIERKINPN-----LVTFSALIDAFVKKGKLVKAEKL--------- 345
Query: 210 LSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYN 269
Y+ +I+ + + L+ GF M + EA + + M+ + P+ YN
Sbjct: 346 --------YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYN 397
Query: 270 FLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
LI C+ K VDK ++ M G V + + LI
Sbjct: 398 TLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 114/232 (49%), Gaps = 31/232 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R ++P+ T+S+L I+A+ G+ K L+++MI + P++
Sbjct: 314 MIERKINPNLVTFSAL-------IDAFVKKGKLVKAEKLYEEMIKRSI-------DPNIF 359
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY++LI G+C L R+ EA +L M P+ V+YN +I+GFC+ + K EL EM
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++ + + + Y++L++ + D + A ++ +++ G +T
Sbjct: 420 SQRGL--------------VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFK 231
++ ++GL K + +A ++ + S + + TY+ +IE C ++K
Sbjct: 466 YNILLDGLCKNGKLAKAM-VVFEYLQRSTMEPDIY-TYNIMIEGMCKAGKWK 515
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 31/251 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS++ ++ L+ + + + + M +G+S + +YNI+I+ FCR A L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+M ++ YE D +SL+N + + A L ++ GY
Sbjct: 136 LG--------KMMKLGYE------PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
++VT + I+GL + EA ++ M+ C + TY A +
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGC--QPDLVTYGA---------------V 224
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
V G RG A + M + + +Y+ +I C+ ++ D A N++T M + G
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 297 VPHMFSVLALI 307
P++ + +LI
Sbjct: 285 RPNVITYSSLI 295
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 131/308 (42%), Gaps = 54/308 (17%)
Query: 32 EFSKV------SNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGM 85
EFSK+ N D +I G + + S +L TYN LI +C R+ AL +L M
Sbjct: 80 EFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKM 139
Query: 86 PEMGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
++G PD V+ N +++GFC RI + + +EM K + V + +L+ GL
Sbjct: 140 MKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP----DTVTFTTLIHGL-- 193
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTR------- 195
+L E ++DR + G + VT +NGL K+ T
Sbjct: 194 ----------FLHNKASEAVALIDR-MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLN 242
Query: 196 -------EAKEILLSMISNSCLSKTTHTTYDAL-----IENCSNN----EFKSLVELVKG 239
EA ++ S + +S L K H DAL +EN + SL+ +
Sbjct: 243 KMEAAKIEANVVIYSTVIDS-LCKYRHED-DALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ G S+A+R M+ P+ ++ LI + + KA +Y M+ P+
Sbjct: 301 Y---GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 300 MFSVLALI 307
+F+ +LI
Sbjct: 358 IFTYSSLI 365
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 144/323 (44%), Gaps = 54/323 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R ++PD T FNA LI+A G+ + L D+M+H + PD V
Sbjct: 357 MIEREINPDVLT----FNA---LISASVKEGKLFEAEKLCDEMLHRCIFPD-------TV 402
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN++IYG+C R ++A + M ++ SPD V++N +I +CR + + +L E+
Sbjct: 403 TYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+R L Y +L+ G + D ++ A L +E+ G +++T
Sbjct: 459 -SRRGLVANTTTYNTLIHGFCEVD-------------NLNAAQDLFQEMISHGVCPDTIT 504
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNE-------FKS 232
++ + G + + EA E L +I S + T Y+ +I C ++ F S
Sbjct: 505 CNILLYGFCENEKLEEALE-LFEVIQMSKIDLDT-VAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 233 L----VE--------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L VE ++ GF + +S+A M H+PD YN LI +
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Query: 281 VDKAYNMYTRMVHYGFVPHMFSV 303
+DK+ + + M GF F++
Sbjct: 623 IDKSIELISEMRSNGFSGDAFTI 645
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 119/295 (40%), Gaps = 46/295 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDF--------VTGS 56
G PD T+++L ++ CL S+ L M+ G L + +
Sbjct: 171 GFQPDVVTFNTL-------LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P ++T+N LI G C GRV EA ++ M GL D V+Y +++G C++ + A L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+M+E I + + V+Y +++ L + +S A L E+ G
Sbjct: 284 LSKMEETHI-KPDVVIYSAIIDRLCKDGHHSD-------------AQYLFSEMLEKGIAP 329
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
T + I+G R +A+ +L M IE N + + L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDM-----------------IEREINPDVLTFNAL 372
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+ G + EA + D MLH PD YN +I C+ D A +M+ M
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 110/271 (40%), Gaps = 23/271 (8%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
++ ++N LI +C ++ +L + ++G PD V++N ++ G C +A L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 118 MEMDEKRILRMEEVVYESLMQGLSD-EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
M E L + + + GL+ +++L+N +G + +A L ++ G
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNE------ 229
+ VT +NG+ K T+ A +L M K Y A+I+ C +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI--KPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 230 -FKSLVE------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHC 276
F ++E ++ GF G S+A R M+ PD +N LI
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 277 RCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + +A + M+H P + ++I
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 52/292 (17%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
+IN C G+ K M G+ P++VTYN L+ G+ GR+E A I+
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGI-------KPTIVTYNTLVQGFSLRGRIEGARLII 283
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M G PD +YN ++S C G+A E+ EM E ++ + V Y L++G S+
Sbjct: 284 SEMKSKGFQPDMQTYNPILSWMC---NEGRASEVLREMKEIGLVP-DSVSYNILIRGCSN 339
Query: 143 ED----------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
Y++L++ + +E A IL REI G + +SVT
Sbjct: 340 NGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVT 399
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
++ ING + ++A + M+++ + T TY +LI C N+ + EL +
Sbjct: 400 YNILINGYCQHGDAKKAFALHDEMMTDGI--QPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+G+ KPD + N L+ HC N+D+A+++ M
Sbjct: 458 VVGKGM----------------KPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 137/325 (42%), Gaps = 54/325 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL PD +Y+ L I G+ D+M+ G++P F T YN
Sbjct: 322 GLVPDSVSYNIL-------IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYT-------YNT 367
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI+G ++E A ++R + E G+ D+V+YNI+I+G+C+ + KA+ L EM
Sbjct: 368 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDG 427
Query: 125 ILRMEEVVYESLMQGLSDEDA----------------------YSSLMNDYLAQGDMEKA 162
I + + Y SL+ L ++ ++LM+ + A G+M++A
Sbjct: 428 I-QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
+ L +E+ + VT + + GL + + EA+E++ M K H +Y+ LI
Sbjct: 487 FSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI--KPDHISYNTLI 544
Query: 223 ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
G+ +G A D ML P YN L+ + + +
Sbjct: 545 S---------------GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGE 589
Query: 283 KAYNMYTRMVHYGFVPHMFSVLALI 307
A + M G VP+ S ++I
Sbjct: 590 LAEELLREMKSEGIVPNDSSFCSVI 614
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 116/282 (41%), Gaps = 61/282 (21%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P T N ++ L R+E A M M + + ++NI+I+ C+ GK +
Sbjct: 188 PKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCK---EGKLKKA 244
Query: 117 K--MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
K + + E ++ V Y +L+QG S +G +E A ++ E+ G+
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFS-------------LRGRIEGARLIISEMKSKGF 291
Query: 175 LSESVTESVFINGLSKKART----REAKEILLSMISNSCLSKTTHTTYDALIENCSNN-- 228
+ T + ++ + + R RE KEI ++ +S +Y+ LI CSNN
Sbjct: 292 QPDMQTYNPILSWMCNEGRASEVLREMKEI--GLVPDS-------VSYNILIRGCSNNGD 342
Query: 229 ---EFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKP--------------------DG 265
F E+VK +G+V ++T++HG D
Sbjct: 343 LEMAFAYRDEMVK----QGMVP-TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 266 GVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
YN LI +C+ + KA+ ++ M+ G P F+ +LI
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 140/323 (43%), Gaps = 54/323 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R ++PD T FNA LI+A G+ + L D+M+H + PD V
Sbjct: 357 MIEREINPDVLT----FNA---LISASVKEGKLFEAEKLCDEMLHRCIFPD-------TV 402
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN++IYG+C R ++A + M ++ SPD V++N +I +CR + + +L E+
Sbjct: 403 TYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+R L Y +L+ G + D ++ A L +E+ G +++T
Sbjct: 459 -SRRGLVANTTTYNTLIHGFCEVD-------------NLNAAQDLFQEMISHGVCPDTIT 504
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVEL--- 236
++ + G + + EA E L +I S + T Y+ +I C ++ +L
Sbjct: 505 CNILLYGFCENEKLEEALE-LFEVIQMSKIDLDT-VAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 237 ----------------VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
+ GF + +S+A M H+PD YN LI +
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Query: 281 VDKAYNMYTRMVHYGFVPHMFSV 303
+DK+ + + M GF F++
Sbjct: 623 IDKSIELISEMRSNGFSGDAFTI 645
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 118/295 (40%), Gaps = 46/295 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDF--------VTGS 56
G PD T+++L ++ CL S+ L M+ G L + +
Sbjct: 171 GFQPDVVTFNTL-------LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P ++T+N LI G C GRV EA ++ M GL D V+Y +++G C++ + A L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+M+E I D YS++++ G A L E+ G
Sbjct: 284 LSKMEETHI--------------KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
T + I+G R +A+ +L MI T++ALI S+ E
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV--LTFNALIS-------ASVKE- 379
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G + EA + D MLH PD YN +I C+ D A +M+ M
Sbjct: 380 -------GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 110/271 (40%), Gaps = 23/271 (8%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
++ ++N LI +C ++ +L + ++G PD V++N ++ G C +A L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 118 MEMDEKRILRMEEVVYESLMQGLSD-EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
M E L + + + GL+ +++L+N +G + +A L ++ G
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNE------ 229
+ VT +NG+ K T+ A +L M K Y A+I+ C +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI--KPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 230 -FKSLVE------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHC 276
F ++E ++ GF G S+A R M+ PD +N LI
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 277 RCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + +A + M+H P + ++I
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 132/310 (42%), Gaps = 51/310 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDF-------- 52
ML G P+ TYS+L I+ +C G+ K + ++M + +PD
Sbjct: 579 MLSEGCLPNIVTYSAL-------IDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 53 -VTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPG 111
+ P++VTY AL+ G+C RVEEA +L M G P+ + Y+ +I G C++ +
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 112 KAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAH 171
+A E+K EM E +Y YSSL++ Y + A + ++
Sbjct: 692 EAQEVKTEMSEHGF---PATLY-----------TYSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 172 DGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFK 231
+ V + I+GL K +T EA +++ M C + TY A+I+
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC--QPNVVTYTAMID-------- 787
Query: 232 SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN--VDKAYNMYT 289
GF M G + + M P+ Y LI +HC CKN +D A+N+
Sbjct: 788 -------GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI-DHC-CKNGALDVAHNLLE 838
Query: 290 RMVHYGFVPH 299
M + H
Sbjct: 839 EMKQTHWPTH 848
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 134/343 (39%), Gaps = 66/343 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G PD TYS ++N C + L ++M G++ D +
Sbjct: 474 MIGQGFIPDTSTYS-------KVLNYLCNASKMELAFLLFEEMKRGGLVAD-------VY 519
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY ++ +C G +E+A M E+G +P+ V+Y +I + + ++ A EL
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL---- 575
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKA-YILDREIAH------DG 173
E ++ E + + YS+L++ + G +EKA I +R D
Sbjct: 576 -------FETMLSEGCLPNIV---TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 174 YLSE---------SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN 224
Y + VT ++G K R EA+++L +M C + YDALI+
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC--EPNQIVYDALIDG 683
Query: 225 -CSNNEFKSLVELVKGFRMRGLVSE-------------------AARAHDTMLHGNHKPD 264
C + E+ G + A++ ML + P+
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 265 GGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+Y +I C+ D+AY + M G P++ + A+I
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 116/296 (39%), Gaps = 47/296 (15%)
Query: 10 EGTYSS--LFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIY 67
EG Y S +FN SL++AYC G+ S L +M+ G +P + V YN LI
Sbjct: 366 EGCYPSPKIFN---SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY-------VVYNILIG 415
Query: 68 GYCFLGRVEEALGILRGMPEMG----LSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
C G + L + E L+ V I +S F R YE
Sbjct: 416 SIC--GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE-------- 465
Query: 124 RILRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
+ V+ E + QG + D YS ++N ME A++L E+ G +++ T +
Sbjct: 466 ---KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
+ ++ K +A++ M C TY ALI +
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNV--VTYTALIH---------------AYLK 565
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
VS A +TML P+ Y+ LI HC+ V+KA ++ RM VP
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +I+ C G+ + L M G P++VTY A+I G+ +G++E L
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGC-------QPNVVTYTAMIDGFGMIGKIETCL 799
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+L M G++P+ V+Y ++I C+ A+ L EM + Y +++G
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH-WPTHTAGYRKVIEG 858
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
+ E S + D + Q D + R + I+ L K R A
Sbjct: 859 FNKEFIESLGLLDEIGQDDTAPFLSVYR---------------LLIDNLIKAQRLEMALR 903
Query: 200 ILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSE 248
+L + + S +TY++LIE+ C N+ ++ +L +G++ E
Sbjct: 904 LLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 118/313 (37%), Gaps = 79/313 (25%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P V Y LI G C EEA+ L M P+ V+Y+ ++ G ++ G+
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC--- 356
Query: 117 KMEMDEKRILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
KR+L M +M+G ++SL++ Y GD AY L +++ G++
Sbjct: 357 ------KRVLNM------MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404
Query: 176 --------------------------------SESVTESVFINGLSKKARTR-------- 195
SE + V +N ++ + TR
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 196 -EAKEILLSMISNSCLSKTTHTTYDALIE---NCSNNEFKSLV--ELVKG---------- 239
+A ++ MI + T +TY ++ N S E L+ E+ +G
Sbjct: 465 EKAFSVIREMIGQGFIPDT--STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 240 -----FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
F GL+ +A + + M P+ Y LI + + K V A ++ M+
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 295 GFVPHMFSVLALI 307
G +P++ + ALI
Sbjct: 583 GCLPNIVTYSALI 595
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 134/310 (43%), Gaps = 65/310 (20%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y SLIN C GG+ S+ ++ D+M+ GV P+L+TYNALI G+C ++EA
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGV-------QPNLITYNALINGFCKNDMLKEA 385
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L + + G P YN++I +C++ + + LK EM+ + I
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI------------- 432
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D Y+ L+ G++E A L ++ G L + VT + + G +K +R+A
Sbjct: 433 -VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKA- 489
Query: 199 EILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVE--------------------LV 237
+LL +S L K H TY+ +++ C K+ L+
Sbjct: 490 AMLLKEMSKMGL-KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
+G+ +G + +A + ML P+ Y + E MV GFV
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEE----------------MVDQGFV 592
Query: 298 P----HMFSV 303
P H+F+V
Sbjct: 593 PDIEGHLFNV 602
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 28/176 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PD GTY+ L I C G L DQ+ G+ P LVT++
Sbjct: 431 GIVPDVGTYNCL-------IAGLCRNGNIEAAKKLFDQLTSKGL--------PDLVTFHI 475
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ GYC G +A +L+ M +MGL P ++YNIV+ G+C+ A ++ +M+++R
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
LRM Y L+QG Y +G +E A +L E+ G + +T
Sbjct: 536 RLRMNVASYNVLLQG-------------YSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 133/300 (44%), Gaps = 50/300 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R + P+ T++ + INA C G+ +K ++ + M G SP++V
Sbjct: 214 MIRRKIQPNVFTFNVV-------INALCKTGKMNKARDVMEDMKVYGC-------SPNVV 259
Query: 61 TYNALIYGYCFL---GRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIRE-PGKAYEL 116
+YN LI GYC L G++ +A +L+ M E +SP+ ++NI+I GF + PG
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF 319
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
K +D+ ++ + Y SL+ GL + G + +A + ++ G
Sbjct: 320 KEMLDQD--VKPNVISYNSLINGLCN-------------GGKISEAISMRDKMVSAGVQP 364
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+T + ING K +EA ++ S+ + T Y+ LI+ + L ++
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT--RMYNMLID-----AYCKLGKI 417
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
GF ++ + M PD G YN LI CR N++ A ++ ++ G
Sbjct: 418 DDGFALK----------EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 30/253 (11%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
P++ T+N +I C G++ +A ++ M G SP+ VSYN +I G+C++ GK Y
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY- 278
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
K ++E+V + L+ ++ L++ + ++ + + +E+
Sbjct: 279 -------KADAVLKEMVENDVSPNLT---TFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLV 234
++ + INGL + EA + M+S + TY+ALI C N+ K +
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGV--QPNLITYNALINGFCKNDMLKEAL 386
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
++ + +G V P +YN LI +C+ +D + + M
Sbjct: 387 DMFGSVKGQGAV----------------PTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430
Query: 295 GFVPHMFSVLALI 307
G VP + + LI
Sbjct: 431 GIVPDVGTYNCLI 443
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 124/299 (41%), Gaps = 53/299 (17%)
Query: 19 AYFSLINAYC-LGG--EFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRV 75
+Y +LI+ YC LGG + K + +M+ N V SP+L T+N LI G+ +
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV-------SPNLTTFNILIDGFWKDDNL 312
Query: 76 EEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYES 135
++ + + M + + P+ +SYN +I+G C + +A ++ +M + + + Y +
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV-QPNLITYNA 371
Query: 136 LMQGLSDED----------------------AYSSLMNDYLAQGDMEKAYILDREIAHDG 173
L+ G D Y+ L++ Y G ++ + L E+ +G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 174 YLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKS 232
+ + T + I GL + AK++ + S T+ L+E C E +
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL---PDLVTFHILMEGYCRKGESRK 488
Query: 233 LVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
L+K GL KP YN ++ +C+ N+ A NM T+M
Sbjct: 489 AAMLLKEMSKMGL----------------KPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 122/307 (39%), Gaps = 49/307 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD T+++L +N C G + L D+M+ G P
Sbjct: 1 MVETGCRPDVVTFTTL-------MNGLCCEGRVLQALALVDRMVEEGHQP---------- 43
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y +I G C +G E AL +L M E + V YN +I C+ A L EM
Sbjct: 44 -YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM 102
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+K I D YS +++ + G A L R++ + VT
Sbjct: 103 HDKGI--------------FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVT 148
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
S IN L K+ + EA+EI M+ T TY+++I+ GF
Sbjct: 149 FSALINALVKEGKVSEAEEIYGDMLRRGIFPTT--ITYNSMID---------------GF 191
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ +++A R D+M + PD ++ LI +C+ K VD ++ M G V +
Sbjct: 192 CKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 251
Query: 301 FSVLALI 307
+ LI
Sbjct: 252 VTYTTLI 258
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 18/160 (11%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ R ++PD T+S+L INA G+ S+ ++ M+ G+ P + +
Sbjct: 137 MIERQINPDVVTFSAL-------INALVKEGKVSEAEEIYGDMLRRGIFP-------TTI 182
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN++I G+C R+ +A +L M SPD V+++ +I+G+C+ + E+ EM
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 121 DEKRILRMEEVVYESLMQG---LSDEDAYSSLMNDYLAQG 157
+ I+ V Y +L+ G + D DA L+N ++ G
Sbjct: 243 HRRGIV-ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 42/268 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y ++I+ C G NL +M G+ PD ++TY+ +I +C GR +A
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPD-------VITYSGMIDSFCRSGRWTDAE 131
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+LR M E ++PD V+++ +I+ + E ++ EE+ + L +G
Sbjct: 132 QLLRDMIERQINPDVVTFSALINALVK---------------EGKVSEAEEIYGDMLRRG 176
Query: 140 L-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ Y+S+++ + Q + A + +A + VT S ING K R
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 199 EILLSMISNSCLSKT-THTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
EI M ++ T T+TT L+ GF G + A + M+
Sbjct: 237 EIFCEMHRRGIVANTVTYTT------------------LIHGFCQVGDLDAAQDLLNVMI 278
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAY 285
P+ + ++ C K + KA+
Sbjct: 279 SSGVAPNYITFQSMLASLCSKKELRKAF 306
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M + SPD T+S+L IN YC + +M G++ + V
Sbjct: 207 MASKSCSPDVVTFSTL-------INGYCKAKRVDNGMEIFCEMHRRGIVAN-------TV 252
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
TY LI+G+C +G ++ A +L M G++P+ +++ +++ C +E KA+ +
Sbjct: 253 TYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 132/310 (42%), Gaps = 47/310 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y L++ YC G+ +HD MI GV + N+LI GYC G++ EA
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGV-------RTNTTICNSLINGYCKSGQLVEAE 386
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
I M + L PD +YN ++ G+CR +A +L +M +K ++ + Y L++G
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV-MTYNILLKG 445
Query: 140 LS----------------------DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
S DE + S+L+ GD +A L + G L++
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD 505
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELV 237
++T +V I+GL K + EAKEIL ++ C K TY AL
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNVNIFRC--KPAVQTYQALSH-------------- 549
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
G+ G + EA + M P +YN LI + ++++K ++ + G
Sbjct: 550 -GYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLT 608
Query: 298 PHMFSVLALI 307
P + + ALI
Sbjct: 609 PTVATYGALI 618
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 121/293 (41%), Gaps = 50/293 (17%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
+SPD T S + +NAYC G N+ M+ + ++VTYN+L
Sbjct: 221 VSPDVFTCSIV-------VNAYCRSG------NVDKAMVFAKETESSLGLELNVVTYNSL 267
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR---IREPGKAYELKMEMDE 122
I GY +G VE +LR M E G+S + V+Y +I G+C+ + E +EL + E
Sbjct: 268 INGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL---LKE 324
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
K++ ++D+ Y LM+ Y G + A + + G + + +
Sbjct: 325 KKL--------------VADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICN 370
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
ING K + EA++I M N K H TY+ L++ G+
Sbjct: 371 SLINGYCKSGQLVEAEQIFSRM--NDWSLKPDHHTYNTLVD---------------GYCR 413
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
G V EA + D M P YN L+ + R +++ M+ G
Sbjct: 414 AGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 14/120 (11%)
Query: 8 PDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIY 67
PDE TY+ L I+ + G+ +K L D+M G++P+ +VTYNALI
Sbjct: 753 PDEYTYTIL-------IHGCAIAGDINKAFTLRDEMALKGIIPN-------IVTYNALIK 798
Query: 68 GYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILR 127
G C LG V+ A +L +P+ G++P+A++YN +I G + +A LK +M EK ++R
Sbjct: 799 GLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVR 858
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 139/358 (38%), Gaps = 73/358 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------ 54
ML RG++ DE + S+L A F L G+F++ L + ++ G+L D +T
Sbjct: 462 MLKRGVNADEISCSTLLEALFKL-------GDFNEAMKLWENVLARGLLTDTITLNVMIS 514
Query: 55 ----------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P++ TY AL +GY +G ++EA + M G+ P
Sbjct: 515 GLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP 574
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDA-YSSLMN 151
YN +ISG + R K +L +E+ + GL+ A Y +L+
Sbjct: 575 TIEMYNTLISGAFKYRHLNKVADLVIELRAR---------------GLTPTVATYGALIT 619
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL- 210
+ G ++KAY E+ G S N L + + EA +L ++ L
Sbjct: 620 GWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLL 679
Query: 211 ------------SKTTHTTYDALIENCSNNEFKSLV--------ELVKGFRMRGLVSEAA 250
S TT + E+ N+ K L+ + G G + +A
Sbjct: 680 PGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDAR 739
Query: 251 RAHDTMLHGNH-KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ +L + PD Y LI +++KA+ + M G +P++ + ALI
Sbjct: 740 KLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALI 797
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 94/245 (38%), Gaps = 35/245 (14%)
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
AL + M +SPD + +IV++ +CR KA E + L + V Y SL+
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
G Y GD+E + R ++ G VT + I G KK EA
Sbjct: 269 NG-------------YAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 198 KEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVE-------------------LV 237
+ + ++ L H Y L++ C + + V L+
Sbjct: 316 EHV-FELLKEKKLVADQH-MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLI 373
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
G+ G + EA + M + KPD YN L+ +CR VD+A + +M V
Sbjct: 374 NGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVV 433
Query: 298 PHMFS 302
P + +
Sbjct: 434 PTVMT 438
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 105/289 (36%), Gaps = 74/289 (25%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSP------ 57
RGL+P TY +L I +C G K +MI G+ + S
Sbjct: 605 RGLTPTVATYGAL-------ITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 58 -------------SLVTYNALIYGYCFLGRVEEALG------------ILRGMPEMGLSP 92
+V ++ L+ GY L EA + P+ L P
Sbjct: 658 RLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVP 717
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG---LSDEDAYSSL 149
+ + YN+ I+G C+ GK +++ R L + L+ + DE Y+ L
Sbjct: 718 NNIVYNVAIAGLCK---AGK-------LEDARKL------FSDLLSSDRFIPDEYTYTIL 761
Query: 150 MNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSC 209
++ GD+ KA+ L E+A G + VT + I GL K A+ +L +
Sbjct: 762 IHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGI 821
Query: 210 LSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
TY+ LI+ G G V+EA R + M+
Sbjct: 822 TPNA--ITYNTLID---------------GLVKSGNVAEAMRLKEKMIE 853
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 145/343 (42%), Gaps = 66/343 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYF----------------------------SLINAYCLGGE 32
ML +GL P+ TYS L + +F ++IN C G+
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
SK + +I S S +YN++I G+ +G + A+ R M E G SP
Sbjct: 570 TSKAKEMLQNLIKEK------RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSP 623
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ V++ +I+GFC+ A E+ EM M+ D AY +L++
Sbjct: 624 NVVTFTSLINGFCKSNRMDLALEMTHEMKS--------------MELKLDLPAYGALIDG 669
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISN--SCL 210
+ + DM+ AY L E+ G + + I+G + A ++ M+++ SC
Sbjct: 670 FCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCD 729
Query: 211 SKTTHTTYDALIE----NCSNNEFKSLVE------------LVKGFRMRGLVSEAARAHD 254
T T D L++ N +++ + L++ LV G +G +A++ +
Sbjct: 730 LFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLE 789
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
M + P+ +Y+ +I H R N+++A+ ++ M+ G V
Sbjct: 790 EMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 10 EGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGY 69
E YS +Y S+I+ + G+ + +M NG SP++VT+ +LI G+
Sbjct: 583 EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG-------KSPNVVTFTSLINGF 635
Query: 70 CFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRME 129
C R++ AL + M M L D +Y +I GFC+ + AY L E+ E + M
Sbjct: 636 CKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL--MP 693
Query: 130 EV-VYESLMQGLSDE-------DAYSSLMND---------------YLAQGDMEKAYILD 166
V VY SL+ G + D Y ++ND L G++ A L
Sbjct: 694 NVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLY 753
Query: 167 REIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCS 226
E+ G + + + V +NGLSKK + +A ++L M K T + L+ +
Sbjct: 754 SELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM-------KKKDVTPNVLLYST- 805
Query: 227 NNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
++ G G ++EA R HD ML D V+N L+
Sbjct: 806 ---------VIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 127/305 (41%), Gaps = 50/305 (16%)
Query: 27 YCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMP 86
+C G+ ++ M G+ P++V YN ++ +C + ++ A I M
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGI-------EPNVVFYNNMMLAHCRMKNMDLARSIFSEML 511
Query: 87 EMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDE--- 143
E GL P+ +Y+I+I GF + ++ A+++ +M+ EV+Y +++ GL
Sbjct: 512 EKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASN-FEANEVIYNTIINGLCKVGQT 570
Query: 144 --------------------DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
+Y+S+++ ++ GD + A RE++ +G VT +
Sbjct: 571 SKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTS 630
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRM 242
ING K R A E+ M S K Y ALI+ C N+ K+ L
Sbjct: 631 LINGFCKSNRMDLALEMTHEMKSMEL--KLDLPAYGALIDGFCKKNDMKTAYTLFSELPE 688
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
GL+ P+ VYN LI +D A ++Y +MV+ G +F+
Sbjct: 689 LGLM----------------PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFT 732
Query: 303 VLALI 307
+I
Sbjct: 733 YTTMI 737
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 106/250 (42%), Gaps = 38/250 (15%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY ++I + G +EEA+ ++ M G+ ++ +++G+C+ E GKA +L
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDL---- 367
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQG-DMEKAYILDREIAHDGYLSESV 179
RMEE +GL+ + S+M ++ + +MEKA + SV
Sbjct: 368 ----FNRMEE-------EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSV 416
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTH--TTYDALIENCSNNEFKSLVELV 237
I G K E+ E L + ++S S H + C + + +
Sbjct: 417 LVHTMIQGCLKA----ESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFL 472
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
K +G+ +P+ YN +++ HCR KN+D A ++++ M+ G
Sbjct: 473 KMMEQKGI----------------EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLE 516
Query: 298 PHMFSVLALI 307
P+ F+ LI
Sbjct: 517 PNNFTYSILI 526
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y S+I A+ G + + D+M+ G+ S++ +L+ GYC + +A
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGI-------PMSVIAATSLVNGYCKGNELGKA 364
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L + M E GL+PD V +++++ FC+ E KA E M M RI +V+ +
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 139 GLSDEDAYSSL--MND----YLAQGDM-EKAYIL 165
L E ++L ND ++A G M K ++L
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLL 458
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 127/308 (41%), Gaps = 48/308 (15%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
LIN CL G ++ L M +GV PD VT YN L G+ LG + A ++
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVT-------YNILAKGFHLLGMISGAWEVI 315
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM----- 137
R M + GLSPD ++Y I++ G C++ L +M R + ++ S+M
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM-LSRGFELNSIIPCSVMLSGLC 374
Query: 138 -----------------QGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
GLS D AYS +++ G + A L E+ L S
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T + GL +K EA+ +L S+IS+ T D ++ N ++ G
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSG-------ETLDIVLYNI----------VIDG 477
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ G + EA ++ P +N LI +C+ +N+ +A + + YG P
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537
Query: 300 MFSVLALI 307
+ S L+
Sbjct: 538 VVSYTTLM 545
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 130/291 (44%), Gaps = 40/291 (13%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS+V++N+++ GYC LG V+ A + + GL P S+NI+I+G C + +A EL
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 117 KMEMDEK----------------RILRM----EEVVYESLMQGLS-DEDAYSSLMNDYLA 155
+M++ +L M EV+ + L +GLS D Y+ L+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 156 QGDMEKAYILDREIAHDGY-LSESVTESVFINGLSKKARTREAKEILLSMISNS------ 208
G+++ +L +++ G+ L+ + SV ++GL K R EA + M ++
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 209 CLSKTTH------------TTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTM 256
S H YD + + ++ L+ G +G++ EA D++
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ D +YN +I + + +++A ++ ++ G P + + +LI
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 135/350 (38%), Gaps = 79/350 (22%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSL----- 59
GLSPD AY +I+ C G+F L+D+M +LP+ T L
Sbjct: 393 GLSPD-------LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 445
Query: 60 -----------------------VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
V YN +I GY G +EEAL + + + E G++P +
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQ 156
+N +I G+C+ + +A ++ +D ++ + V +Y++LM+ Y
Sbjct: 506 FNSLIYGYCKTQNIAEARKI---LDVIKLYGLAPSVV-----------SYTTLMDAYANC 551
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS----- 211
G+ + L RE+ +G +VT SV GL + + +L I C
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 212 -----KTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAA--------------- 250
TY+ +I+ C ++ + R L + +A
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 251 RAHDTMLHGNHKPDGGVYNF----LIVEHCRCKNVDKAYNMYTRMVHYGF 296
R D+ ++ + + + F LI HC + + A ++ +++H GF
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 49/221 (22%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL+P +Y++L +AY A C G + L +M G+ P+ VTY+
Sbjct: 533 GLAPSVVSYTTLMDAY-----ANC--GNTKSIDELRREMKAEGI-------PPTNVTYSV 578
Query: 65 LIYGYCFLGRVEEALGILR---------GMPEM---GLSPDAVSYNIVISGFCRIREPGK 112
+ G C + E +LR G+ +M G+ PD ++YN +I CR++
Sbjct: 579 IFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG 638
Query: 113 AYELKMEMDEKRILRMEEVVY----------------ESLMQGLSDED------AYSSLM 150
A+ +E+ + R L Y +S + L +++ AY++L+
Sbjct: 639 AFVF-LEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 697
Query: 151 NDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKK 191
+ +GD E A L ++ H G+ S IN L ++
Sbjct: 698 KAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 127/308 (41%), Gaps = 48/308 (15%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
LIN CL G ++ L M +GV PD VT YN L G+ LG + A ++
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVT-------YNILAKGFHLLGMISGAWEVI 315
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM----- 137
R M + GLSPD ++Y I++ G C++ L +M R + ++ S+M
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM-LSRGFELNSIIPCSVMLSGLC 374
Query: 138 -----------------QGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
GLS D AYS +++ G + A L E+ L S
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T + GL +K EA+ +L S+IS+ T D ++ N ++ G
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSG-------ETLDIVLYNI----------VIDG 477
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ G + EA ++ P +N LI +C+ +N+ +A + + YG P
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537
Query: 300 MFSVLALI 307
+ S L+
Sbjct: 538 VVSYTTLM 545
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 130/291 (44%), Gaps = 40/291 (13%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS+V++N+++ GYC LG V+ A + + GL P S+NI+I+G C + +A EL
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 117 KMEMDEK----------------RILRM----EEVVYESLMQGLS-DEDAYSSLMNDYLA 155
+M++ +L M EV+ + L +GLS D Y+ L+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 156 QGDMEKAYILDREIAHDGY-LSESVTESVFINGLSKKARTREAKEILLSMISNS------ 208
G+++ +L +++ G+ L+ + SV ++GL K R EA + M ++
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 209 CLSKTTH------------TTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTM 256
S H YD + + ++ L+ G +G++ EA D++
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ D +YN +I + + +++A ++ ++ G P + + +LI
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 135/350 (38%), Gaps = 79/350 (22%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSL----- 59
GLSPD AY +I+ C G+F L+D+M +LP+ T L
Sbjct: 393 GLSPD-------LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 445
Query: 60 -----------------------VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
V YN +I GY G +EEAL + + + E G++P +
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQ 156
+N +I G+C+ + +A ++ +D ++ + V +Y++LM+ Y
Sbjct: 506 FNSLIYGYCKTQNIAEARKI---LDVIKLYGLAPSVV-----------SYTTLMDAYANC 551
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS----- 211
G+ + L RE+ +G +VT SV GL + + +L I C
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 212 -----KTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAA--------------- 250
TY+ +I+ C ++ + R L + +A
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 251 RAHDTMLHGNHKPDGGVYNF----LIVEHCRCKNVDKAYNMYTRMVHYGF 296
R D+ ++ + + + F LI HC + + A ++ +++H GF
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 49/221 (22%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL+P +Y++L +AY A C G + L +M G+ P+ VTY+
Sbjct: 533 GLAPSVVSYTTLMDAY-----ANC--GNTKSIDELRREMKAEGI-------PPTNVTYSV 578
Query: 65 LIYGYCFLGRVEEALGILR---------GMPEM---GLSPDAVSYNIVISGFCRIREPGK 112
+ G C + E +LR G+ +M G+ PD ++YN +I CR++
Sbjct: 579 IFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG 638
Query: 113 AYELKMEMDEKRILRMEEVVY----------------ESLMQGLSDED------AYSSLM 150
A+ +E+ + R L Y +S + L +++ AY++L+
Sbjct: 639 AFVF-LEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 697
Query: 151 NDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKK 191
+ +GD E A L ++ H G+ S IN L ++
Sbjct: 698 KAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 133/309 (43%), Gaps = 49/309 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML R +SP G ++L I+ C G+ SK L Q ++ G + D T
Sbjct: 461 MLLRNMSPGGGLLTTL-------ISGLCKHGKHSKALELWFQFLNKGFVVDTRTS----- 508
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
NAL++G C G+++EA I + + G D VSYN +ISG C ++ +A+ M +
Sbjct: 509 --NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF---MFL 563
Query: 121 DE--KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
DE KR L+ + Y L+ GL + MN +E+A + +G L +
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFN-------MN------KVEEAIQFWDDCKRNGMLPDV 610
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
T SV I+G K RT E +E M+S + T Y+ LI +
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT--VVYNHLI---------------R 653
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+ G +S A + M H P+ Y LI V++A ++ M G P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 299 HMFSVLALI 307
++F ALI
Sbjct: 714 NVFHYTALI 722
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 45/297 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
++ +G+SPD +++ INA+C GG+ + L +M GV +P++V
Sbjct: 251 VVCKGVSPDVYLFTTA-------INAFCKGGKVEEAVKLFSKMEEAGV-------APNVV 296
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N +I G GR +EA M E G+ P ++Y+I++ G R + G AY + EM
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+K + Y++L++ ++ G + KA + + G S T
Sbjct: 357 TKKGF--------------PPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ I G K + A+ +L M+S + N + F S++ L+
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLS--------------IGFNVNQGSFTSVICLLCSH 448
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
M A R ML N P GG+ LI C+ KA ++ + ++ GFV
Sbjct: 449 LM---FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 92/226 (40%), Gaps = 37/226 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RGL PD TYS L F++ + + D NG+LPD +
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNM-------NKVEEAIQFWDDCKRNGMLPD-------VY 611
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY+ +I G C R EE M + P+ V YN +I +CR A EL+ +M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 121 DEKRILRMEEVVYESLMQGLSD----EDA------------------YSSLMNDYLAQGD 158
K I Y SL++G+S E+A Y++L++ Y G
Sbjct: 672 KHKGI-SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
M K L RE+ +T +V I G ++ EA +L M
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LI AYC G S L + M H G+ SP+ TY +LI G + RVEEA
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGI-------SPNSATYTSLIKGMSIISRVEEA 699
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M GL P+ Y +I G+ ++ + K L EM K +
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV------------- 746
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
++ Y+ ++ Y G++ +A L E+ G + +S+T FI G K+ EA
Sbjct: 747 -HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 133/309 (43%), Gaps = 49/309 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML R +SP G ++L I+ C G+ SK L Q ++ G + D T
Sbjct: 461 MLLRNMSPGGGLLTTL-------ISGLCKHGKHSKALELWFQFLNKGFVVDTRTS----- 508
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
NAL++G C G+++EA I + + G D VSYN +ISG C ++ +A+ M +
Sbjct: 509 --NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF---MFL 563
Query: 121 DE--KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
DE KR L+ + Y L+ GL + MN +E+A + +G L +
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFN-------MN------KVEEAIQFWDDCKRNGMLPDV 610
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
T SV I+G K RT E +E M+S + T Y+ LI +
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT--VVYNHLI---------------R 653
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+ G +S A + M H P+ Y LI V++A ++ M G P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 299 HMFSVLALI 307
++F ALI
Sbjct: 714 NVFHYTALI 722
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 45/297 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
++ +G+SPD +++ INA+C GG+ + L +M GV +P++V
Sbjct: 251 VVCKGVSPDVYLFTTA-------INAFCKGGKVEEAVKLFSKMEEAGV-------APNVV 296
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N +I G GR +EA M E G+ P ++Y+I++ G R + G AY + EM
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+K + Y++L++ ++ G + KA + + G S T
Sbjct: 357 TKKGF--------------PPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ I G K + A+ +L M+S + N + F S++ L+
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLS--------------IGFNVNQGSFTSVICLLCSH 448
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
M A R ML N P GG+ LI C+ KA ++ + ++ GFV
Sbjct: 449 LM---FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 92/226 (40%), Gaps = 37/226 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RGL PD TYS L F++ + + D NG+LPD +
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNM-------NKVEEAIQFWDDCKRNGMLPD-------VY 611
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY+ +I G C R EE M + P+ V YN +I +CR A EL+ +M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 121 DEKRILRMEEVVYESLMQGLSD----EDA------------------YSSLMNDYLAQGD 158
K I Y SL++G+S E+A Y++L++ Y G
Sbjct: 672 KHKGI-SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
M K L RE+ +T +V I G ++ EA +L M
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LI AYC G S L + M H G+ SP+ TY +LI G + RVEEA
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGI-------SPNSATYTSLIKGMSIISRVEEA 699
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M GL P+ Y +I G+ ++ + K L EM K +
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV------------- 746
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
++ Y+ ++ Y G++ +A L E+ G + +S+T FI G K+ EA
Sbjct: 747 -HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 120/295 (40%), Gaps = 39/295 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +LI+ +C G K L M G PD LVTYN L+ Y ++ A
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPD-------LVTYNVLLNYYYDNNMLKRAE 275
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
G++ M G+ DA SYN ++ CR+ P K Y ++ E R G
Sbjct: 276 GVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR--------------G 321
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
D +YS+L+ + + KAY L E+ G + VT + I ++ + AK+
Sbjct: 322 FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 200 ILLSM---------------ISNSCLSKTTHTTY---DALIENCSNNEFKSLVELVKGFR 241
+L M + + C S Y + +IE+ + S L+ G
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 242 MRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
G V+EA + + M PD + F+I R K + AY ++ +M+ GF
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 136/339 (40%), Gaps = 73/339 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPD------FVT 54
M+ RG PD +Y+ L N F G+ + + + MI +GV PD V
Sbjct: 140 MVQRGREPDVVSYTILINGLFR-------AGKVTDAVEIWNAMIRSGVSPDNKACAALVV 192
Query: 55 G-----------------------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLS 91
G S V YNALI G+C GR+E+A + M ++G
Sbjct: 193 GLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCE 252
Query: 92 PDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLM 150
PD V+YN++++ + D + R E V+ E + G+ D +Y+ L+
Sbjct: 253 PDLVTYNVLLNYY---------------YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL 297
Query: 151 NDYLAQGDMEKAY-ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNS- 208
+ +K Y + +E+ G+ + V+ S I + + TR+A + M
Sbjct: 298 KRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGM 356
Query: 209 CLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVY 268
++ T+T+ L+K F G S A + D M PD Y
Sbjct: 357 VMNVVTYTS------------------LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFY 398
Query: 269 NFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++ C+ NVDKAY ++ M+ + P S +LI
Sbjct: 399 TTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLI 437
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 10/152 (6%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y SLI A+ G S L DQM G+ SP + Y ++ C G V++A
Sbjct: 362 TYTSLIKAFLREGNSSVAKKLLDQMTELGL-------SPDRIFYTTILDHLCKSGNVDKA 414
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
G+ M E ++PDA+SYN +ISG CR +A +L +M K +E+ ++ ++
Sbjct: 415 YGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP-DELTFKFIIG 473
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIA 170
GL S+ + M+K + LDR+++
Sbjct: 474 GLIRGKKLSAAYKVW--DQMMDKGFTLDRDVS 503
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y +LI +C K L ++M G++ + +VTY +LI + G A
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMN-------VVTYTSLIKAFLREGNSSVA 379
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+L M E+GLSPD + Y ++ C+ KAY + +M E I + + Y SL+
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP-DAISYNSLIS 438
Query: 139 GL 140
GL
Sbjct: 439 GL 440
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
F + NL D + V+ VT +P+ V+Y+ LI+G C +GR+EEA G+ M E G P
Sbjct: 240 FCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP 299
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMN 151
+Y ++I C KA+ L EM + +G + Y+ L++
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEM---------------IPRGCKPNVHTYTVLID 344
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
G +E+A + R++ D +T + ING K R A E+L M +C
Sbjct: 345 GLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC-- 402
Query: 212 KTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
K T++ EL++G G +A ML PD YN L
Sbjct: 403 KPNVRTFN---------------ELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 272 IVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
I CR +++ AY + + M + P + A+I
Sbjct: 448 IDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 142/364 (39%), Gaps = 76/364 (20%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS------- 56
+G P TY+ L I A C G K NL D+MI G P+ T +
Sbjct: 295 KGCQPSTRTYTVL-------IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 57 ---------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
PS++TYNALI GYC GRV A +L M + P+
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED----------- 144
++N ++ G CR+ +P KA L M + L + V Y L+ GL E
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNG-LSPDIVSYNVLIDGLCREGHMNTAYKLLSS 466
Query: 145 -----------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKAR 193
+++++N + QG + A + G + VT + I+G+ K +
Sbjct: 467 MNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526
Query: 194 TREAKEILLSMISNSCLSK--TTHTTYDALIENCSNNEFKSLV----------------E 235
TR+A IL +++ L+ + + D L + C E +++
Sbjct: 527 TRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTT 586
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
LV G G ++ + R + M P+ Y +I C+ V++A + + M G
Sbjct: 587 LVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Query: 296 FVPH 299
P+
Sbjct: 647 VSPN 650
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 42/277 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL P TY++L + LI + + G F + + M +G LP+ + Y
Sbjct: 576 GLVPSVVTYTTLVDG---LIRSGDITGSF----RILELMKLSGCLPN-------VYPYTI 621
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
+I G C GRVEEA +L M + G+SP+ V+Y +++ G+ + +A E M E R
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE-R 680
Query: 125 ILRMEEVVYESLMQGLS------DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+ + +Y SL+QG D S++ + L + D E L + G
Sbjct: 681 GYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISG 740
Query: 179 VTESVFINGLSKKARTREAKEIL-------------LSMISNSCLSKTTHTTYDALIENC 225
+ + L K+ RT E+ +++ + +I S SK HT LI
Sbjct: 741 LC-IFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLV 799
Query: 226 SNN----EFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ FKS +++G + G +A RA + ++
Sbjct: 800 LKSGFVPSFKSFCLVIQGLKKEG---DAERARELVME 833
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 136/336 (40%), Gaps = 68/336 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTG----- 55
M RG +PD TY+ L +N C G + + M +G P+ +T
Sbjct: 265 MRDRGCTPDVVTYNVL-------VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 56 -----------------------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
SPS+VT+N LI C G + A+ IL MP+ G P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL-SDEDAYSSLMN 151
+++SYN ++ GFC+ EK++ R E + + +G D Y++++
Sbjct: 378 NSLSYNPLLHGFCK---------------EKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
G +E A + +++ G +T + I+GL+K +T +A ++L M +
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL-- 480
Query: 212 KTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
K TY + LV G G V EA + +P+ +N +
Sbjct: 481 KPDTITYSS---------------LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 272 IVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++ C+ + D+A + M++ G P+ S LI
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 122/279 (43%), Gaps = 52/279 (18%)
Query: 1 MLWRGLSPDEGTYSSLFN----------------------------AYFSLINAYCLGGE 32
ML +G SP T++ L N +Y L++ +C +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ ++M+ G PD +VTYN ++ C G+VE+A+ IL + G SP
Sbjct: 395 MDRAIEYLERMVSRGCYPD-------IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
++YN VI G + + GKA +L EM K L+ + + Y SL+ GLS E
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD-LKPDTITYSSLVGGLSRE--------- 497
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
G +++A E G +VT + + GL K +T A + L+ MI+ C K
Sbjct: 498 ----GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC--K 551
Query: 213 TTHTTYDALIENCS-NNEFKSLVELVKGFRMRGLVSEAA 250
T+Y LIE + K +EL+ +GL+ +++
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 55/314 (17%)
Query: 31 GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGL 90
GE + + M+++G +PD ++ LI G+C LG+ +A IL + G
Sbjct: 116 GELEEGFKFLENMVYHGNVPD-------IIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLM 150
PD ++YN++ISG+C+ E A + M + + V Y ++++ L D M
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 151 N--DYLAQGD----------MEKAYILDREIAH----------DGYLSESVTESVFINGL 188
D + Q D + +A D + H G + VT +V +NG+
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 189 SKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELV-----KGFR- 241
K+ R EA + L M S+ C + T++ ++ + CS + +L+ KGF
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGC--QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 242 -------------MRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
+GL+ A + M +P+ YN L+ C+ K +D+A
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 289 TRMVHYGFVPHMFS 302
RMV G P + +
Sbjct: 403 ERMVSRGCYPDIVT 416
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 131/316 (41%), Gaps = 35/316 (11%)
Query: 18 NAYFSLINAYCLGGEF-SKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
+ YF+L + C ++ SK +L D+M GV P Y LI +C + V
Sbjct: 565 SVYFTLFTSLCAEKDYISKAQDLLDRMWKLGV-------EPEKSMYGKLIGAWCRVNNVR 617
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL 136
+A + + PD +Y I+I+ +CR+ EP +AY L +M ++R ++ + V Y L
Sbjct: 618 KAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM-KRRDVKPDVVTYSVL 676
Query: 137 MQG---------------LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
+ + D Y+ ++N Y D++K Y L +++ + + VT
Sbjct: 677 LNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTY 736
Query: 182 SVFINGLSKKARTREAKEILLS--------MISNSCLSKT---THTTYDALIENCSNNEF 230
+V + ++ +RE K + +I C +D +IE+ + +
Sbjct: 737 TVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDA 796
Query: 231 KSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTR 290
L+ G + EA D M+ KPD Y LI CR V KA +
Sbjct: 797 APYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKE 856
Query: 291 MVHYGFVPHMFSVLAL 306
M+ G P S+ A+
Sbjct: 857 MLEKGIKPTKASLSAV 872
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 47/305 (15%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
S++ YC G FS+ +L + + S V YN LG+VEEA+ +
Sbjct: 366 SILQCYCQMGNFSEAYDLFKEFRETNI-------SLDRVCYNVAFDALGKLGKVEEAIEL 418
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
R M G++PD ++Y +I G C + A++L +EMD + ++V +++ G
Sbjct: 419 FREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG--KTPDIVIYNVLAG-- 474
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT------------ESVFINGLS 189
L + LAQ E +++ Y++ ++ F L
Sbjct: 475 ------GLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE 528
Query: 190 KKARTREAKEILLSMISNSCLSKTTHTTYDALI-------ENCSNNEFKSLVELVKGFRM 242
K+R +A SM+ C + ++ I ++ F SL
Sbjct: 529 HKSRENDA-----SMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCA------E 577
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+ +S+A D M +P+ +Y LI CR NV KA + +V VP +F+
Sbjct: 578 KDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFT 637
Query: 303 VLALI 307
+I
Sbjct: 638 YTIMI 642
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 124/307 (40%), Gaps = 55/307 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G++PD Y++L I CL G+ S +L +M G PD +V
Sbjct: 422 MTGKGIAPDVINYTTL-------IGGCCLQGKCSDAFDLMIEMDGTGKTPD-------IV 467
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YN L G G +EA L+ M G+ P V++N+VI G E KA
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA------- 520
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
E YESL + DA S++ + A G ++ A+ +R I + L +SV
Sbjct: 521 ---------EAFYESLEHKSRENDA--SMVKGFCAAGCLDHAF--ERFIRLEFPLPKSVY 567
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI-ENCSNNEFKSLVELVKG 239
++F + ++K +A+++L M + + Y LI C N + E +
Sbjct: 568 FTLFTSLCAEKDYISKAQDLLDRMWKLGV--EPEKSMYGKLIGAWCRVNNVRKAREFFEI 625
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ +V PD Y +I +CR +AY ++ M P
Sbjct: 626 LVTKKIV----------------PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPD 669
Query: 300 M--FSVL 304
+ +SVL
Sbjct: 670 VVTYSVL 676
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 112/292 (38%), Gaps = 35/292 (11%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y + I CL + + ++ Q + + + V S + Y ++ G C+ R+E+A
Sbjct: 255 YLNFIEGLCLN-QMTDIAYFLLQPLRDANI--LVDKSDLGIAYRKVVRGLCYEMRIEDAE 311
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
++ M + G+ PD Y+ +I G + KA ++ +M +KR R+ V+ S++Q
Sbjct: 312 SVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKR-KRINCVIVSSILQC 370
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
Y G+ +AY L +E + V +V + L K + EA E
Sbjct: 371 -------------YCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIE 417
Query: 200 ILLSM---------------ISNSCLSKTTHTTYDALIENCSNNEFKSLV---ELVKGFR 241
+ M I CL +D +IE + +V L G
Sbjct: 418 LFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLA 477
Query: 242 MRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
GL EA M + KP +N +I +DKA Y + H
Sbjct: 478 TNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEH 529
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 95/247 (38%), Gaps = 38/247 (15%)
Query: 75 VEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYE 134
+ +A +L M ++G+ P+ Y +I +CR+ KA E + K+I+
Sbjct: 581 ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIV-------- 632
Query: 135 SLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
D Y+ ++N Y + ++AY L ++ + VT SV +N +
Sbjct: 633 ------PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMK 686
Query: 195 REAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
RE + +I + Y C N+ K + L K + R +V +
Sbjct: 687 REMEA--FDVIPDVVYYTIMINRY------CHLNDLKKVYALFKDMKRREIVPDVVTY-- 736
Query: 255 TMLHGNH--------------KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
T+L N KPD Y LI C+ ++ +A ++ +M+ G P
Sbjct: 737 TVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDA 796
Query: 301 FSVLALI 307
ALI
Sbjct: 797 APYTALI 803
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 144/342 (42%), Gaps = 58/342 (16%)
Query: 13 YSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFL 72
Y + + S++ CL G+ L +MI++GV+P L+T+N L+ G C
Sbjct: 117 YDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIP-------GLITHNHLLNGLCKA 169
Query: 73 GRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE---------- 122
G +E+A G++R M EMG SP+ VSYN +I G C + KA L M++
Sbjct: 170 GYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTC 229
Query: 123 -----------------KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYIL 165
K++L EE++ S D + LM+ G++ +A +
Sbjct: 230 NIIVHALCQKGVIGNNNKKLL--EEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEV 287
Query: 166 DREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN- 224
+E++ ++SV +V I GL A + M+ TY+ LI
Sbjct: 288 WKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDV--FTYNTLISAL 345
Query: 225 CSNNEFKSLVEL-------------------VKGFRMRGLVSEAARAHDTMLHGNHKPDG 265
C +F +L ++G + G V+ A +ML + P+
Sbjct: 346 CKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEV 405
Query: 266 GVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++N +I + R + A ++ M+ YG P++++ ALI
Sbjct: 406 LLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 49/229 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------ 54
M+ RG++PD TY+ +LI+A C G+F + +LH M + GV PD ++
Sbjct: 326 MVKRGVNPDVFTYN-------TLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQ 378
Query: 55 ----------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P ++ +N +I GY G AL +L M G+ P
Sbjct: 379 GLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKP 438
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ + N +I G+ + A+ +K EM +I D Y+ L+
Sbjct: 439 NVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKI--------------HPDTTTYNLLLGA 484
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
G + A+ L E+ G + +T + + GL K R ++A+ +L
Sbjct: 485 ACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLL 533
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 31/248 (12%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
V YN +I G C G + A G + M + G++PD +YN +IS C+ + +A +L
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
M + +++ Y+ ++QGL GD+ +A + L E +
Sbjct: 361 MQNGGVAP-DQISYKVIIQGLC-------------IHGDVNRANEFLLSMLKSSLLPEVL 406
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
+V I+G + T A +L M+S Y +NN L+ G
Sbjct: 407 LWNVVIDGYGRYGDTSSALSVLNLMLS-----------YGVKPNVYTNNA------LIHG 449
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ G + +A + M PD YN L+ C ++ A+ +Y M+ G P
Sbjct: 450 YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Query: 300 MFSVLALI 307
+ + L+
Sbjct: 510 IITYTELV 517
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
+ PD TY+ L + A C G L+D+M+ G PD ++TY L
Sbjct: 471 IHPDTTTYNLL-------LGAACTLGHLRLAFQLYDEMLRRGCQPD-------IITYTEL 516
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAY 114
+ G C+ GR+++A +L + G++ D V + I+ + R++ PG+AY
Sbjct: 517 VRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 49/303 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L+N +C + S + +MI G PS+VT+ +L+ G+C RV +AL +
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLG-------HEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS- 141
M MG P+ V YN +I G C+ ++ A +L M EK + + V Y SL+ GL
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVTYNSLISGLCS 233
Query: 142 ---------------------DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
D +++L++ + +G + +A E+ + VT
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
S+ I GL +R EA+E+ M+S C TY LI C + + + ++L
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV--VTYSILINGYCKSKKVEHGMKLFCE 351
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
RG+V Y LI +CR ++ A ++ RMV G P+
Sbjct: 352 MSQRGVVRNTV----------------TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 300 MFS 302
+ +
Sbjct: 396 IIT 398
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 117/263 (44%), Gaps = 32/263 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M R + PD T FNA LI+A G S+ +++MI + PD +V
Sbjct: 247 MTKREIYPDVFT----FNA---LIDACVKEGRVSEAEEFYEEMIRRSLDPD-------IV 292
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY+ LIYG C R++EA + M G PD V+Y+I+I+G+C+ ++ +L EM
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++ ++R V Y L+QG Y G + A + R + G +T
Sbjct: 353 SQRGVVR-NTVTYTILIQG-------------YCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
+V ++GL + +A IL M N TY+ +I C E ++
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNG--MDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 240 FRMRGLVSEAARAHDTMLHGNHK 262
+GL+ + + TM+ G +K
Sbjct: 457 LNCQGLMPDIW-TYTTMMLGLYK 478
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 53/205 (25%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFS----------------------------LINAYCLGGE 32
M+ +G PD TYS L N Y LI YC G+
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ + +M+ GV P+++TYN L++G C G++E+AL IL M + G+
Sbjct: 377 LNVAEEIFRRMVFCGV-------HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL-MQGL-SDEDAYSSLM 150
D V+YNI+I G C+ E A++ +Y SL QGL D Y+++M
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWD----------------IYCSLNCQGLMPDIWTYTTMM 473
Query: 151 NDYLAQGDMEKAYILDREIAHDGYL 175
+G +A L R++ DG L
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGIL 498
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 109/281 (38%), Gaps = 56/281 (19%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS+ ++ L+ + + + + + M +G+ + + NI+++ FCR + A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 117 KMEM----DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLM 150
+M E I V + SL+ G D Y++++
Sbjct: 139 LGKMIKLGHEPSI-----VTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTII 193
Query: 151 NDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL 210
+ ++ A L + DG + VT + I+GL R +A ++ SC+
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV------SCM 247
Query: 211 SK----TTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGG 266
+K T++ALI+ C G VSEA ++ M+ + PD
Sbjct: 248 TKREIYPDVFTFNALIDACVK---------------EGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 267 VYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
Y+ LI C +D+A M+ MV G P + + LI
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 144/322 (44%), Gaps = 48/322 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L RG SP TY++L I +C G+ + S + + MI GV P++
Sbjct: 273 VLERGDSPCAITYNTL-------IRGFCKLGQLKEASEIFEFMIERGV-------RPNVY 318
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G C +G+ +EAL +L M E P+AV+YNI+I+ C+ A E+ +E+
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI-VEL 377
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES-- 178
+KR R + + Y L+ GL A+GD+++A L + D ++
Sbjct: 378 MKKRRTRPDNITYNILLGGLC-------------AKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 179 VTESVFINGLSKKARTREAKEI--------------LLSMISNSCLSKTTHTTYDALIEN 224
++ + I+GL K+ R +A +I +++ NS L L +
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 225 CSNNEF----KSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
S+++ + ++ GF G+++ A M +P YN L+ C+ +
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 281 VDKAYNMYTRMVHYGFVPHMFS 302
+D+A+ ++ M P + S
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVS 566
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 40/276 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y ++I +C G E K L ++M +G S SLVT+ LI +C G+++EA
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGC-------SWSLVTWGILIDAFCKAGKMDEA 231
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+G L+ M MGL D V Y +I GFC D + R + + E L +
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFC---------------DCGELDRGKALFDEVLER 276
Query: 139 GLSD-EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
G S Y++L+ + G +++A + + G T + I+GL +T+EA
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
++L MI + TY+ +I + GLV++A + M
Sbjct: 337 LQLLNLMIEKD--EEPNAVTYNIIINKLCKD---------------GLVADAVEIVELMK 379
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
+PD YN L+ C ++D+A + M+
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 46/293 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y SLI +C GE + L D+++ G SP +TYN LI G+C LG+++EA
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERG-------DSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
I M E G+ P+ +Y +I G C + + +A +L M EK
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK---------------- 346
Query: 140 LSDED----AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTR 195
DE+ Y+ ++N G + A + + +++T ++ + GL K
Sbjct: 347 --DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 196 EAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
EA ++L M+ +S + +Y+ALI C N + +A +D
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR----------------LHQALDIYD 448
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++ D N L+ + +V+KA ++ ++ V + + A+I
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 54/320 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M R PD TY+ L + C G+ + S L M+ + D P ++
Sbjct: 378 MKKRRTRPDNITYNIL-------LGGLCAKGDLDEASKLLYLMLKDSSYTD-----PDVI 425
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+YNALI+G C R+ +AL I + E + D V+ NI+++ + + KA EL ++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 121 DEKRILRMEEVVYESLMQGLSDEDA----------------------YSSLMNDYLAQGD 158
+ +I+R + Y +++ G Y+ L++ +G
Sbjct: 486 SDSKIVRNSD-TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+++A+ L E+ D + V+ ++ I+G K + A+ +L+ M S + LS TY
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM-SRAGLSPDLF-TY 602
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
LI N F L G + EA D M+ +PD + + ++++C
Sbjct: 603 SKLI-----NRFLKL----------GYLDEAISFFDKMVDSGFEPDAHICDS-VLKYCIS 646
Query: 279 K-NVDKAYNMYTRMVHYGFV 297
+ DK + ++V V
Sbjct: 647 QGETDKLTELVKKLVDKDIV 666
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 31/250 (12%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
+ V+ + L+ Y + + A G+L M + G + + ++NI++ G CR E GKA L
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
EM + + D +Y++++ + ++EKA L E+ G
Sbjct: 166 REMRRNSL--------------MPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWS 211
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELV 237
VT + I+ K + EA L M K D ++ L+
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEM-------KFMGLEADLVV----------YTSLI 254
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
+GF G + D +L P YN LI C+ + +A ++ M+ G
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 298 PHMFSVLALI 307
P++++ LI
Sbjct: 315 PNVYTYTGLI 324
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 131/344 (38%), Gaps = 58/344 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M GL P+ TY++L + YC G + + + M VLPD L
Sbjct: 266 MKKNGLVPNRVTYNNL-------VYGYCKLGSLKEAFQIVELMKQTNVLPD-------LC 311
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI G C G + E L ++ M + L PD V+YN +I G + +A +L +M
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 121 D---------------------EKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGD 158
+ EKR +V M G S D Y +L+ YL GD
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+ A + RE+ G ++T + ++ L K+ + EA +L S + TY
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI--VDEVTY 489
Query: 219 DALIENCSNNE--------------------FKSLVELVKGFRMRGLVSEAARAHDTMLH 258
LI E + L+ G G A D +
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE 549
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
PD +N +I+ +C+ V+KA+ Y + + F P ++
Sbjct: 550 SGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 144/326 (44%), Gaps = 57/326 (17%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
++PD TY+++ + A G S + L M NG++P+ VTYN L
Sbjct: 236 VNPDNVTYNTI-------LKAMSKKGRLSDLKELLLDMKKNGLVPN-------RVTYNNL 281
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
+YGYC LG ++EA I+ M + + PD +YNI+I+G C + EL MD +
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL---MDAMKS 338
Query: 126 LRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFI 185
L+++ D Y++L++ G +A L ++ +DG + VT ++ +
Sbjct: 339 LKLQ-----------PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISL 387
Query: 186 NGLSK----KARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELV---- 237
L K +A TR+ KE L+ M S T HT A ++ + +E++
Sbjct: 388 KWLCKEEKREAVTRKVKE-LVDMHGFSPDIVTYHTLIKAYLK---VGDLSGALEMMREMG 443
Query: 238 -KGFRMRGLV-----------SEAARAHDTMLHGNHKP----DGGVYNFLIVEHCRCKNV 281
KG +M + + AH+ +L+ HK D Y LI+ R + V
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHN-LLNSAHKRGFIVDEVTYGTLIMGFFREEKV 502
Query: 282 DKAYNMYTRMVHYGFVPHMFSVLALI 307
+KA M+ M P + + +LI
Sbjct: 503 EKALEMWDEMKKVKITPTVSTFNSLI 528
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 137/348 (39%), Gaps = 77/348 (22%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTG---------- 55
L PD TY++L + F L G + L +QM ++GV + VT
Sbjct: 341 LQPDVVTYNTLIDGCFEL-------GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKE 393
Query: 56 -------------------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
SP +VTY+ LI Y +G + AL ++R M + G+ + ++
Sbjct: 394 EKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTIT 453
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED------------ 144
N ++ C+ R+ +A+ L + KR ++EV Y +L+ G E+
Sbjct: 454 LNTILDALCKERKLDEAHNL-LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 145 ----------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
++SL+ G E A E+A G L + T + I G K+ R
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 195 REAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
+A E Y+ I++ + + L+ G G+ +A +
Sbjct: 573 EKAFEF-----------------YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
T++ + D YN +I C+ K + +AY++ + M G P F+
Sbjct: 616 TLIE-EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 40/277 (14%)
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL-RGMPEMGLS 91
S + D M+ GV S ++ T+N L+ GYC G++E+ALG+L R + E ++
Sbjct: 185 ISSAREVFDDMVKIGV-------SLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVN 237
Query: 92 PDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMN 151
PD V+YN ++ + EL ++M +K L V Y +L+ G
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDM-KKNGLVPNRVTYNNLVYG------------ 284
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
Y G +++A+ + + L + T ++ INGL RE E++ +M S
Sbjct: 285 -YCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM--KSLKL 341
Query: 212 KTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
+ TY+ LI+ C F + GL EA + + M + K + +N
Sbjct: 342 QPDVVTYNTLIDGC--------------FEL-GLSLEARKLMEQMENDGVKANQVTHNIS 386
Query: 272 IVEHCRCKNVDKAYNMYTRMVH-YGFVPHMFSVLALI 307
+ C+ + + +V +GF P + + LI
Sbjct: 387 LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 112/269 (41%), Gaps = 51/269 (18%)
Query: 5 GLSPDEGTYSSLFNAYF----------------------------SLINAYCLGGEFSKV 36
G SPD TY +L AY ++++A C + +
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 37 SNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
NL + G + D VT Y LI G+ +VE+AL + M ++ ++P +
Sbjct: 471 HNLLNSAHKRGFIVDEVT-------YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVST 523
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQ 156
+N +I G C GK EL ME + +E+ L L D+ ++S++ Y +
Sbjct: 524 FNSLIGGLCH---HGKT-ELAME-------KFDELAESGL---LPDDSTFNSIILGYCKE 569
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
G +EKA+ E + ++ T ++ +NGL K+ T +A ++I + T+
Sbjct: 570 GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYN 629
Query: 217 TYDALIENCSNNEFKSLVELVKGFRMRGL 245
T + C + + K +L+ +GL
Sbjct: 630 TMISAF--CKDKKLKEAYDLLSEMEEKGL 656
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 25/187 (13%)
Query: 15 SLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGR 74
S FN SLI C G+ D++ +G+LPD T +N++I GYC GR
Sbjct: 522 STFN---SLIGGLCHHGKTELAMEKFDELAESGLLPDDST-------FNSIILGYCKEGR 571
Query: 75 VEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYE 134
VE+A + PD + NI+++G C+ KA + E+R EV
Sbjct: 572 VEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-----EV--- 623
Query: 135 SLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
D Y+++++ + +++AY L E+ G + T + FI+ L + +
Sbjct: 624 -------DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKL 676
Query: 195 REAKEIL 201
E E+L
Sbjct: 677 SETDELL 683
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 29/201 (14%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RG DE TY +L +F + K + D+M V +P++ T+N
Sbjct: 480 RGFIVDEVTYGTLIMGFFR-------EEKVEKALEMWDEMKK-------VKITPTVSTFN 525
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+LI G C G+ E A+ + E GL PD ++N +I G+C+ KA+E E K
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE-SIK 584
Query: 124 RILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
+ + L+ GL E +N + I +RE+ ++VT +
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFF-------NTLIEEREV-------DTVTYNT 630
Query: 184 FINGLSKKARTREAKEILLSM 204
I+ K + +EA ++L M
Sbjct: 631 MISAFCKDKKLKEAYDLLSEM 651
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 131/342 (38%), Gaps = 74/342 (21%)
Query: 14 SSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPD------FVTG------------ 55
S + + L+ C G+ + L D++I GVLP+ F+ G
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 56 ----------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC 105
P ++TYN LIYG C + +EA L M GL PD+ +YN +I+G+C
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 106 RIREPGKAYELKMEMDEKRILR---MEEVVYESLMQGLSDEDA----------------- 145
+ G +L + + ++ Y SL+ GL E
Sbjct: 333 K----GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 146 -----YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEI 200
Y++L+ QG + +A L E++ G + E T ++ +NGL K +A +
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 201 LLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGN 260
+ MIS T++ LI G+ + + A D ML
Sbjct: 449 VKVMISKGYFPDI--FTFNILIH---------------GYSTQLKMENALEILDVMLDNG 491
Query: 261 HKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
PD YN L+ C+ + Y MV G P++F+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 36/242 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML G+ PD TY+SL +N C +F V + M+ G +P+L
Sbjct: 487 MLDNGVDPDVYTYNSL-------LNGLCKTSKFEDVMETYKTMVEKGC-------APNLF 532
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL--KM 118
T+N L+ C +++EALG+L M ++PDAV++ +I GFC+ + AY L KM
Sbjct: 533 TFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Query: 119 E------------------MDEKRILRMEEVVYESLMQGLSDEDAYS-SLMND-YLAQGD 158
E EK + M E +++ ++ D Y+ LM D + G+
Sbjct: 593 EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN 652
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+ Y E+ +G++ T IN L + R EA I+ M+ + + +T
Sbjct: 653 VNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTIC 712
Query: 219 DA 220
D
Sbjct: 713 DV 714
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 123/308 (39%), Gaps = 47/308 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ GL PD TY++L I YC GG + + NG +PD
Sbjct: 312 MVNEGLEPDSYTYNTL-------IAGYCKGGMVQLAERIVGDAVFNGFVPD-------QF 357
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY +LI G C G AL + G+ P+ + YN +I G +A +L EM
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
EK ++ + ++ L+N G + A L + + GY + T
Sbjct: 418 SEKGLI--------------PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
++ I+G S + + A EIL M+ N TY++L+ C ++F+ ++E
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVY--TYNSLLNGLCKTSKFEDVME---- 517
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ TM+ P+ +N L+ CR + +D+A + M + P
Sbjct: 518 ------------TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 300 MFSVLALI 307
+ LI
Sbjct: 566 AVTFGTLI 573
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 125/312 (40%), Gaps = 49/312 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y + Y G+ + N+ ++M DF P++ +YNA++ G ++A
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERM-------DFYDCEPTVFSYNAIMSVLVDSGYFDQA 130
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M + G++PD S+ I + FC+ P A L M + M V Y +++
Sbjct: 131 HKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGC-EMNVVAYCTVVG 189
Query: 139 GLSDED----------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
G +E+ ++ L+ +GD+++ L ++ G L
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVE 235
T ++FI GL ++ A ++ +I K TY+ LI C N++F+
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG--PKPDVITYNNLIYGLCKNSKFQ---- 303
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
EA M++ +PD YN LI +C+ V A + V G
Sbjct: 304 ------------EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 296 FVPHMFSVLALI 307
FVP F+ +LI
Sbjct: 352 FVPDQFTYRSLI 363
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 137/349 (39%), Gaps = 58/349 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG PD T + + + A C G ++ +MI G P+L+
Sbjct: 243 MIQRGFIPDNATCTLI-------LTALCENGLVNRAIWYFRKMIDLGF-------KPNLI 288
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ +LI G C G +++A +L M G P+ ++ +I G C+ KA+ L +++
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 348
Query: 121 DEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYLAQGD 158
+ Y S++ G ED Y++L+N + G
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+AY L + +G++ T + I+ L KK+R EA E+L SC + TY
Sbjct: 409 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF--SCGLEADGVTY 466
Query: 219 DALI-ENCSNNEFKSLVE-------------------LVKGFRMRGLVSEAARAHDTMLH 258
LI E C N+ + L+ F + + E+ R ++
Sbjct: 467 TILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVS 526
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P Y +I +C+ ++D A + M +G VP F+ +LI
Sbjct: 527 LGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 132/341 (38%), Gaps = 70/341 (20%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS------------ 56
D G +L N + SLI+ C G + + ++M+ NG P+ T +
Sbjct: 280 DLGFKPNLIN-FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 57 -----------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNI 99
P++ TY ++I GYC ++ A + M E GL P+ +Y
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 100 VISGFCRIREPGKAYELKMEMDEKRIL-----------------RMEEVVYESLMQGLS- 141
+I+G C+ G+AYEL M ++ + R E YE L + S
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPE-AYELLNKAFSC 457
Query: 142 ----DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
D Y+ L+ + Q D+ +A + G+ ++ ++ I ++ + +E+
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ + ++S + T TY ++I +C E G + A + M
Sbjct: 518 ERLFQLVVSLGLIP--TKETYTSMI-SCYCKE--------------GDIDLALKYFHNMK 560
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
PD Y LI C+ VD+A +Y M+ G P
Sbjct: 561 RHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 28 CLGGEFSKVSNLHDQMIHNGVLPDFVTG--SPSLVTYNALIYGYCFLGRVEEALGILRGM 85
C+ FS++ L++ + G++ D +PS +T N ++ LG +E A + M
Sbjct: 152 CMLRNFSEIGRLNEAV---GMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 86 PEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDA 145
G+ PD+ SY +++ G R + +I + + + +G ++A
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFR---------------DGKIQEADRWLTGMIQRGFIPDNA 253
Query: 146 YSSLMNDYLAQ-GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+L+ L + G + +A R++ G+ + + I+GL KK ++A E+L M
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313
Query: 205 ISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGN-HKP 263
+ N K T+ ALI+ G RG +A R ++ + +KP
Sbjct: 314 VRNG--WKPNVYTHTALID---------------GLCKRGWTEKAFRLFLKLVRSDTYKP 356
Query: 264 DGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ Y +I +C+ +++A +++RM G P++ + LI
Sbjct: 357 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 14/132 (10%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL P + TY+S+ I+ YC G+ M +G +PD T Y +
Sbjct: 528 GLIPTKETYTSM-------ISCYCKEGDIDLALKYFHNMKRHGCVPDSFT-------YGS 573
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI G C V+EA + M + GLSP V+ + +C+ + A L +D+K
Sbjct: 574 LISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKL 633
Query: 125 ILRMEEVVYESL 136
+R + L
Sbjct: 634 WIRTVRTLVRKL 645
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 45/290 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LI+ +C GE + ++ +M+ + V P+ SLV Y +I G+ G + A
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN------SLV-YTTIIDGFFQRGDSDNA 287
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ L M G+ D +Y ++ISG C + +A E+ +M++ ++
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV------------ 335
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
D ++++MN Y G M+ A + ++ G+ + V S I+G++K + EA
Sbjct: 336 --PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA- 392
Query: 199 EILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
I C+ K Y LI+ C +F + L GLV
Sbjct: 393 ------IVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLV----------- 435
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD +Y I C+ N+ A+ + TRMV G + + + LI
Sbjct: 436 -----PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 131/301 (43%), Gaps = 48/301 (15%)
Query: 8 PDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIY 67
PD +++SLFN FSK+ L + ++ GV+ SP++VTY+ I
Sbjct: 127 PDIVSFNSLFNG-------------FSKMKMLDEVFVYMGVM--LKCCSPNVVTYSTWID 171
Query: 68 GYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILR 127
+C G ++ AL M LSP+ V++ +I G+C+ + A L EM R +R
Sbjct: 172 TFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM---RRVR 228
Query: 128 MEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFING 187
M V Y++L++ + +G+M++A + + D S+ + I+G
Sbjct: 229 MSLNVV-----------TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 188 LSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLV 246
++ + A + L M++ + T Y +I C N + K E+V+ LV
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQG--MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 335
Query: 247 SEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLAL 306
PD ++ ++ + + + A NMY +++ GF P + ++ +
Sbjct: 336 ----------------PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTM 379
Query: 307 I 307
I
Sbjct: 380 I 380
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 44/222 (19%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSL------ 59
L PD ++++ NAYF G N++ ++I G PD V S +
Sbjct: 334 LVPDMVIFTTMMNAYFK-------SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKN 386
Query: 60 -----------------VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVIS 102
V Y LI C G E + + E GL PD Y I+
Sbjct: 387 GQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIA 446
Query: 103 GFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKA 162
G C+ A++LK M ++ +L ++ + Y +L+ GL+ ++G M +A
Sbjct: 447 GLCKQGNLVDAFKLKTRMVQEGLL-LDLLAYTTLIYGLA-------------SKGLMVEA 492
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+ E+ + G +S + I K+ A ++LL M
Sbjct: 493 RQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 124/302 (41%), Gaps = 46/302 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL P+ TY+++ Y + G+ + ++M+ G PD TY
Sbjct: 221 GLVPNLVTYTTILGGYVA-------RGDMESAKRVLEEMLDRGWYPD-------ATTYTV 266
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ GYC LGR EA ++ M + + P+ V+Y ++I C+ ++ G+A + EM E+
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERS 326
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
+ D +++ +++A L R++ + + ++ S
Sbjct: 327 F--------------MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL 372
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
I+ L K+ R EA+++ S S T+ T L+ G +G
Sbjct: 373 IHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNT------------------LIAGMCEKG 414
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
++EA R D M KP+ YN LI + NV + + M+ G P+ + L
Sbjct: 415 ELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFL 474
Query: 305 AL 306
L
Sbjct: 475 IL 476
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 38/255 (14%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P++ T N L+ C +E A +L +P MGL P+ V+Y ++ G Y
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGG----------YV 237
Query: 116 LKMEMDEKRILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
+ +M+ + V+ E L +G D Y+ LM+ Y G +A + ++ +
Sbjct: 238 ARGDMESAK-----RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEI 292
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT--HTTYDALIENCSNNEFKS 232
VT V I L K+ ++ EA+ + M+ S + ++ DAL E+
Sbjct: 293 EPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK------ 346
Query: 233 LVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
V EA ML N PD + + LI C+ V +A ++
Sbjct: 347 -------------VDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF- 392
Query: 293 HYGFVPHMFSVLALI 307
G +P + + LI
Sbjct: 393 EKGSIPSLLTYNTLI 407
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 123/306 (40%), Gaps = 49/306 (16%)
Query: 4 RGLSPDEGTYSSLFNAY----------FSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFV 53
R P E + L N+Y L+ Y L G + + + +PDF
Sbjct: 97 RAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLR------IPDFG 150
Query: 54 TGSPSLVTYNALIYGYCFLGRVEEALGILRGMPE-MGLSPDAVSYNIVISGFCRIREPGK 112
S+ + N L+ R + + + E G++P+ + N+++ C+ +
Sbjct: 151 VKR-SVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209
Query: 113 AYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHD 172
AY++ ++E+ L+ L Y++++ Y+A+GDME A + E+
Sbjct: 210 AYKV-----------LDEIPSMGLVPNLV---TYTTILGGYVARGDMESAKRVLEEMLDR 255
Query: 173 GYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKS 232
G+ ++ T +V ++G K R EA ++ M N + TY +I ++
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEI--EPNEVTYGVMI--------RA 305
Query: 233 LVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
L + K EA D ML + PD + +I C VD+A ++ +M+
Sbjct: 306 LCKEKKS-------GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKML 358
Query: 293 HYGFVP 298
+P
Sbjct: 359 KNNCMP 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 100/271 (36%), Gaps = 46/271 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML RG PD TY+ L++ YC G FS+ + + D M N + P+ V
Sbjct: 252 MLDRGWYPDATTYT-------VLMDGYCKLGRFSEAATVMDDMEKNEI-------EPNEV 297
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY +I C + EA + M E PD+ VI C + +A L +M
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ + D S+L++ +G + +A L E G + +T
Sbjct: 358 LKNNC--------------MPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLT 402
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ I G+ +K EA + M C K TY+ LIE S N
Sbjct: 403 YNTLIAGMCEKGELTEAGRLWDDMYERKC--KPNAFTYNVLIEGLSKN------------ 448
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
G V E R + ML P+ + L
Sbjct: 449 ---GNVKEGVRVLEEMLEIGCFPNKTTFLIL 476
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
++G+ SL Y +LI C GE ++ L D M P+ TYN LI G
Sbjct: 393 EKGSIPSLL-TYNTLIAGMCEKGELTEAGRLWDDMYERKC-------KPNAFTYNVLIEG 444
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
G V+E + +L M E+G P+ ++ I+ G ++ GK E D +I+ M
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKL---GK------EEDAMKIVSM 495
Query: 129 EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHD 172
++M G D++++ + + G+++K + +E+ H+
Sbjct: 496 ------AVMNGKVDKESWELFLKKF--AGELDKGVLPLKELLHE 531
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 140/352 (39%), Gaps = 73/352 (20%)
Query: 5 GLSPDEGTYSSLFNAYFS----------------------------LINAYCLGGEFSKV 36
G PD T+S LF+ Y S L+NA C G+ K
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 37 SNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
+ + + G++P+ V YN +I GYC G + A + M + G+ PD ++
Sbjct: 374 EEILGREMAKGLVPNEVI-------YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDE-DAYSSLMNDYLA 155
YN +I FC + E ME EK + +M+ ++G+S + Y+ L+ Y
Sbjct: 427 YNCLIRRFCELGE--------MENAEKEVNKMK-------LKGVSPSVETYNILIGGYGR 471
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTH 215
+ + +K + + +E+ +G + V+ IN L K ++ EA+ + M K
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVR- 530
Query: 216 TTYDALIENC------------SNNEFKSLVEL--------VKGFRMRGLVSEAARAHDT 255
Y+ LI+ C S K +EL + G M G +SEA
Sbjct: 531 -IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ KPD YN LI + NV + +Y M G P + + LI
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 132/311 (42%), Gaps = 53/311 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML R L P TY++L I+ YC G K + ++M + + PSL+
Sbjct: 240 MLARRLLPSLITYNTL-------IDGYCKAGNPEKSFKVRERMKADHI-------EPSLI 285
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N L+ G G VE+A +L+ M ++G PDA +++I+ G+ + A
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG----- 340
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAY--SSLMNDYLAQGDMEKA-YILDREIAHDGYLSE 177
VYE+ + +AY S L+N +G +EKA IL RE+A G +
Sbjct: 341 -----------VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK-GLVPN 388
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVEL 236
V + I+G +K A+ + +M K H Y+ LI C E ++ +
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM--KPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
V +++G+ P YN LI + R DK +++ M G
Sbjct: 447 VNKMKLKGV----------------SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 297 VPHMFSVLALI 307
+P++ S LI
Sbjct: 491 MPNVVSYGTLI 501
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 131/333 (39%), Gaps = 51/333 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G+SP TY+ L I Y EF K ++ +M NG +P+ +V
Sbjct: 450 MKLKGVSPSVETYNIL-------IGGYGRKYEFDKCFDILKEMEDNGTMPN-------VV 495
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI C ++ EA + R M + G+SP YN++I G C + A+ EM
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 121 DEKRILRMEEVVYESLMQGLS----------------------DEDAYSSLMNDYLAQGD 158
+K I + V Y +L+ GLS D Y+SL++ Y G+
Sbjct: 556 LKKGI-ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKA---RTREAKEILLS---MISNSCLS- 211
+++ L E+ G T + I+ +K+ R E+ L ++ N L
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHC 674
Query: 212 -------KTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
+ +IE + + L+ G G + E D M +P+
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Query: 265 GGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
YN ++ HC K+ AY Y M GF+
Sbjct: 735 ADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 46/235 (19%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT--------- 54
+GL PD TY+SL I+ Y G + L+++M +G+ P T
Sbjct: 593 KGLKPDVFTYNSL-------ISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT 645
Query: 55 ---------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNI 99
P L+ YN +++ Y G +E+A + + M E + D +YN
Sbjct: 646 KEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNS 705
Query: 100 VISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDM 159
+I G ++ GK E++ +DE ME + D Y+ ++ + D
Sbjct: 706 LILGQLKV---GKLCEVRSLIDEMNAREME-----------PEADTYNIIVKGHCEVKDY 751
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT 214
AY+ RE+ G+L + + ++GL ++ R++EA EI++S ++ L T
Sbjct: 752 MSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA-EIVISEMNGRMLGDVT 805
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 128/312 (41%), Gaps = 40/312 (12%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PD TY L ++ YC G+ +L +M+ N LP+ T N
Sbjct: 391 GVCPDAVTYGCL-------LHGYCSVGKVDAAKSLLQEMMRNNCLPN-------AYTCNI 436
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L++ +GR+ EA +LR M E G D V+ NI++ G C E KA E+ M
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 125 ILRMEEV-------VYESLMQG--LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+ + V +SL++ L D YS+L+N G +A L E+ +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
+SV ++FI+ K+ + A +L M C + TY++LI
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC--HKSLETYNSLI------------- 601
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
G ++ + E D M P+ YN I C + V+ A N+ M+
Sbjct: 602 --LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 296 FVPHMFSVLALI 307
P++FS LI
Sbjct: 660 IAPNVFSFKYLI 671
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 31/273 (11%)
Query: 31 GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGL 90
G+F + + QM G+ PS+ +YN L+ G C LG + +A I+ M G+
Sbjct: 340 GKFIEAETVLKQMTDKGI-------GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSS-- 148
PDAV+Y ++ G+C + + A L EM L +AY+
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL----------------PNAYTCNI 436
Query: 149 LMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM-ISN 207
L++ G + +A L R++ GY ++VT ++ ++GL +A EI+ M +
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 208 SCLSKTTHTTY-----DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
S +Y D+LIEN + + L+ G G +EA M+ +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
PD YN I C+ + A+ + M G
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 137/330 (41%), Gaps = 52/330 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G++P TY+ FN LI A C L D+M G P+
Sbjct: 138 MVLCGIAPQ--TYT--FNL---LIRALCDSSCVDAARELFDEMPEKGC-------KPNEF 183
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+ L+ GYC G ++ L +L M G+ P+ V YN ++S FCR E + +
Sbjct: 184 TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR--------EGRNDD 235
Query: 121 DEKRILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS--- 176
EK + +M E +GL D ++S ++ +G + A + ++ D YL
Sbjct: 236 SEKMVEKMRE-------EGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 177 -ESVTESVFINGLSKKARTREAKEILLSMISNSCLS--KTTHTTYDALIENCSNNEFKSL 233
S+T ++ + G K +AK + S+ N L+ ++ + L+ + E +++
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 234 VE----------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
++ L+ G G++S+A M PD Y L+ +C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
VD A ++ M+ +P+ ++ L+
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 97/251 (38%), Gaps = 65/251 (25%)
Query: 8 PDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS----------- 56
PD TYS+L +N C G F++ NL +M+ + PD V +
Sbjct: 522 PDLITYSTL-------LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574
Query: 57 -----------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNI 99
SL TYN+LI G ++ E G++ M E G+SP+ +YN
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 100 VISGFCRIREPGKAYELKMEMDEKRI-------------------LRMEEVVYESLMQGL 140
I C + A L EM +K I M + V+E+ +
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSIC 694
Query: 141 SDEDAYSSLM-NDYLAQGDMEKAY-----ILDREIAHDGYLSESVTESVFINGLSKKART 194
++ SLM N+ LA G + KA +LDR +L + + ES L KK
Sbjct: 695 GQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES-----LCKKDEL 749
Query: 195 REAKEILLSMI 205
A IL MI
Sbjct: 750 EVASGILHKMI 760
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 123/297 (41%), Gaps = 49/297 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +RGL PD TY+S+ + F KV L D + + D P ++
Sbjct: 288 MKFRGLVPDTVTYNSMIDG-------------FGKVGRLDDTVCFFEEMKDMCC-EPDVI 333
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYNALI +C G++ L R M GL P+ VSY+ ++ FC +E +K +
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC--KEGMMQQAIKFYV 391
Query: 121 DEKRILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
D +R+ GL +E Y+SL++ G++ A+ L E+ G V
Sbjct: 392 DMRRV-------------GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 438
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVK 238
T + I+GL R +EA+E+ M + + +Y+ALI +EL+
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL--ASYNALIHGFVKAKNMDRALELLN 496
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
+ RG+ KPD +Y I C + ++ A + M G
Sbjct: 497 ELKGRGI----------------KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 11 GTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYC 70
G ++F Y +I+ C G+ L ++M G++PD VTYN++I G+
Sbjct: 257 GARPTVF-TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD-------TVTYNSMIDGFG 308
Query: 71 FLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEE 130
+GR+++ + M +M PD ++YN +I+ FC+ + E EM +
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL--KPN 366
Query: 131 VVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
VV +YS+L++ + +G M++A ++ G + T + I+ K
Sbjct: 367 VV------------SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAA 250
+A + M+ + TY ALI+ + E RM+ EA
Sbjct: 415 IGNLSDAFRLGNEMLQVG--VEWNVVTYTALIDGLCDAE-----------RMK----EAE 457
Query: 251 RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMF 301
M P+ YN LI + KN+D+A + + G P +
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 118/290 (40%), Gaps = 48/290 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L++ + G+ V MI G P++ TYN +I C G VE A G+
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAG-------ARPTVFTYNIMIDCMCKEGDVEAARGLF 285
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVV--YESLMQGL 140
M GL PD V+YN +I GF ++ R+++ V +E +
Sbjct: 286 EEMKFRGLVPDTVTYNSMIDGF------------------GKVGRLDDTVCFFEEMKDMC 327
Query: 141 SDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D Y++L+N + G + RE+ +G V+ S ++ K+ ++A
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 199 EILLSMISNSCLSKTTHTTYDALIE-NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+ + M + TY +LI+ NC G +S+A R + ML
Sbjct: 388 KFYVDMRRVGLVP--NEYTYTSLIDANCK----------------IGNLSDAFRLGNEML 429
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ + Y LI C + + +A ++ +M G +P++ S ALI
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 120/351 (34%), Gaps = 88/351 (25%)
Query: 5 GLSPDEGTYSSLFNA----------------------------YFSLINAYCLGGEFSKV 36
GL P+E TY+SL +A Y +LI+ C +
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 37 SNLHDQMIHNGVLPD----------FVTGS------------------PSLVTYNALIYG 68
L +M GV+P+ FV P L+ Y I+G
Sbjct: 457 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 516
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
C L ++E A ++ M E G+ +++ Y ++ + + P + L EM E I +
Sbjct: 517 LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI-EV 575
Query: 129 EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHD-GYLSESVTESVFING 187
V + L+ GL S + DY + I++D G + + + I+G
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAV-DYFNR------------ISNDFGLQANAAIFTAMIDG 622
Query: 188 LSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVS 247
L K + A + M+ + T T L+ G +G V
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYT-----------------SLMDGNFKQGNVL 665
Query: 248 EAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
EA D M K D Y L+ C + KA + M+ G P
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 147/369 (39%), Gaps = 80/369 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------ 54
M+ G PD T++SL +N YC L DQ++ G P+ VT
Sbjct: 144 MMKLGFEPDLVTFTSL-------LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 55 ----------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P++VTYNAL+ G C +GR +A +LR M + + P
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS----------- 141
+ +++ +I F ++ + +A EL M + + + Y SL+ GL
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP-DVFTYGSLINGLCMYGLLDEARQM 315
Query: 142 -----------DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
+E Y++L++ + +E + E++ G ++ ++T +V I G
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMR------ 243
R A+E+ M S + TY+ L++ C N + + + + + R R
Sbjct: 376 VGRPDVAQEVFNQMSSRR--APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Query: 244 -------------GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTR 290
G V +A ++ KP+ Y +I CR + +A +++ +
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 291 MVHYGFVPH 299
M GF+P+
Sbjct: 494 MKEDGFLPN 502
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 106/268 (39%), Gaps = 45/268 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ + PD TY SL IN C+ G + + M NG P+ V
Sbjct: 284 MIQMSVYPDVFTYGSL-------INGLCMYGLLDEARQMFYLMERNGCYPN-------EV 329
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y LI+G+C RVE+ + I M + G+ + ++Y ++I G+C + P A E+ +M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+R D Y+ L++ G +EKA ++ + VT
Sbjct: 390 SSRR--------------APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ I G+ K + +A ++ S+ S K TY +I GF
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKG--MKPNVITYTTMIS---------------GF 478
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVY 268
RGL+ EA M P+ VY
Sbjct: 479 CRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 38/285 (13%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
+++ CL + + S +M+ G PD LVT+ +L+ GYC R+E+A+ +
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPD-------LVTFTSLLNGYCHWNRIEDAIALF 176
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
+ MG P+ V+Y +I C+ R A EL +M R V Y +L+ GL +
Sbjct: 177 DQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS-RPNVVTYNALVTGLCE 235
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
+ GD A++L R++ +T + I+ K + EAKE+
Sbjct: 236 IGRW----------GD--AAWLL-RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL-- 280
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
Y+ +I+ + + L+ G M GL+ EA + M
Sbjct: 281 ---------------YNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P+ +Y LI C+ K V+ ++ M G V + + LI
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 38/288 (13%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +LI + F + +M G+ PD + YN+LI G R++EA
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD-------IFCYNSLIIGLSKAKRMDEAR 507
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
L M E GL P+A +Y ISG+ E A + EM E +
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV-------------- 553
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
L ++ + L+N+Y +G + +A R + G L ++ T +V +NGL K + +A+E
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
I M + D S L+ GF G + +A+ D M+
Sbjct: 614 IFREM-------RGKGIAPDVF----------SYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P+ +YN L+ CR ++KA + M G P+ + +I
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 128/309 (41%), Gaps = 46/309 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G+ D TY+ L N F + + +M G+ PD +
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFK-------NDKVDDAEEIFREMRGKGIAPD-------VF 628
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI G+ LG +++A I M E GL+P+ + YN+++ GFCR E KA EL EM
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 121 DEKRILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
++GL + Y ++++ Y GD+ +A+ L E+ G + +S
Sbjct: 689 S---------------VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
+ ++G + A I C S T F +L+ V
Sbjct: 734 VYTTLVDGCCRLNDVERAITI-FGTNKKGCASSTA--------------PFNALINWVFK 778
Query: 240 FRMRGLVSEAA-RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
F L +E R D KP+ YN +I C+ N++ A ++ +M + +P
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Query: 299 HMFSVLALI 307
+ + +L+
Sbjct: 839 TVITYTSLL 847
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 136/345 (39%), Gaps = 59/345 (17%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+S D TYS L + NA G L +M+ +G+ P + Y+
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKG-------LVHEMVSHGI-----NIKPYM--YDC 352
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
I G +E+A + GM GL P A +Y +I G+CR + + YEL +EM +KR
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM-KKR 411
Query: 125 ILRMEEVVYESLMQGL---SDEDA-------------------YSSLMNDYLAQGDMEKA 162
+ + Y ++++G+ D D Y++L+ +L A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
+ +E+ G + + I GLSK R EA+ L+ M+ N K TY A I
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL--KPNAFTYGAFI 529
Query: 223 EN-CSNNEFKSLVELVKGFR-------------------MRGLVSEAARAHDTMLHGNHK 262
+EF S + VK R +G V EA A+ +M+
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
D Y L+ + VD A ++ M G P +FS LI
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 118/287 (41%), Gaps = 39/287 (13%)
Query: 39 LHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYN 98
L + MI G++P TY+ LI G C + R+E+A +L M +G+S D +Y+
Sbjct: 264 LKESMICKGLVP-------LKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 99 IVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGD 158
++I G + R A L EM I ++ +Y+ + +S E G
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGI-NIKPYMYDCCICVMSKE-------------GV 362
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM-------------- 204
MEKA L + G + ++ + I G ++ R+ E+L+ M
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 205 -ISNSCLSKTTHTTYDALIENCSNNEFKSLV---ELVKGFRMRGLVSEAARAHDTMLHGN 260
+ C S Y+ + E ++ ++V L+K F +A R M
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 261 HKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN LI+ + K +D+A + MV G P+ F+ A I
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 128/329 (38%), Gaps = 65/329 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ GL+P+ Y+ L + +C GE K L D+M G+ P+ V
Sbjct: 653 MVEEGLTPNVIIYNML-------LGGFCRSGEIEKAKELLDEMSVKGL-------HPNAV 698
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY +I GYC G + EA + M GL PD+ Y ++ G CR+ + +A +
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 121 DE--------------------KRILRMEEVVYESLMQGLSDE-----DAYSSLMNDYLA 155
+ K L+ E V LM G D D ++M DYL
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTE--VLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 156 -QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE--------------AKEI 200
+G++E A L ++ + + +T + +NG K R E I
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI 876
Query: 201 LLSMISNSCLSKTTHTTYDALIE-----NCSNNEFKSLVE----LVKGFRMRGLVSEAAR 251
+ S+I N+ L + T L++ N ++ K + L+ GF G + A +
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Query: 252 AHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
+ M+ + PD LI E C N
Sbjct: 937 VMENMVRLQYIPDSATVIELINESCISSN 965
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 62/328 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFS-KVSNLHDQMIHNGVLPDFVTGSPSL 59
M+ G+SPD +F A LI+++C G S +S L +++I S
Sbjct: 120 MIACGVSPD------VF-ALNVLIHSFCKVGRLSFAISLLRNRVI-----------SIDT 161
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
VTYN +I G C G +EA L M +MG+ PD VSYN +I GFC++ +A L E
Sbjct: 162 VTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE 221
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+ E ++ ++ L++ Y +E+AY R++ G+ + V
Sbjct: 222 ISELNLI------------------THTILLSSYYNLHAIEEAY---RDMVMSGFDPDVV 260
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENC-SNNEFKSLVELVK 238
T S IN L K + E +L M S H TY L+++ N ++ + L
Sbjct: 261 TFSSIINRLCKGGKVLEGGLLLREMEEMSVYP--NHVTYTTLVDSLFKANIYRHALALYS 318
Query: 239 GFRMRGL-------------------VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
+RG+ + EA + +L N P+ Y L+ C+
Sbjct: 319 QMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAG 378
Query: 280 NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++ A + T+M+ +P++ + ++I
Sbjct: 379 DLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 28/193 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +L++ C G+ S + QM+ V+P+ +VTY+++I GY G +EEA
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN-------VVTYSSMINGYVKKGMLEEA 418
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM-----DE----------- 122
+ +LR M + + P+ +Y VI G + + A EL EM +E
Sbjct: 419 VSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNH 478
Query: 123 -KRILRMEEV---VYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
KRI R++EV V + + +G++ D+ Y+SL++ + GD E A E+ G +
Sbjct: 479 LKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWD 538
Query: 178 SVTESVFINGLSK 190
V+ +V I+G+ K
Sbjct: 539 VVSYNVLISGMLK 551
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 125/306 (40%), Gaps = 49/306 (16%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+G+ PD T++ + N+ G+ + L D+M G+ PSL++ N
Sbjct: 567 KGIEPDIATFNIMMNSQRK-------QGDSEGILKLWDKMKSCGI-------KPSLMSCN 612
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
++ C G++EEA+ IL M M + P+ +Y I + + + ++
Sbjct: 613 IVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFK-------- 664
Query: 124 RILRMEEVVYESLMQ-GLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
+E+L+ G+ Y++L+ G +KA ++ ++ G++ ++VT
Sbjct: 665 --------THETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTF 716
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFR 241
+ ++G + R+A +TY ++E + + +++G
Sbjct: 717 NSLMHGYFVGSHVRKA-----------------LSTYSVMMEAGISPNVATYNTIIRGLS 759
Query: 242 MRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMF 301
GL+ E + M +PD YN LI + N+ + +Y M+ G VP
Sbjct: 760 DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS 819
Query: 302 SVLALI 307
+ LI
Sbjct: 820 TYNVLI 825
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 23/188 (12%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
Y +LI C G K + + M G +PD VT+N+L++GY V +
Sbjct: 679 QVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD-------TVTFNSLMHGYFVGSHVRK 731
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
AL M E G+SP+ +YN +I G D I +++ + E
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLS---------------DAGLIKEVDKWLSEMKS 776
Query: 138 QGLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
+G+ +D Y++L++ G+M+ + + E+ DG + ++ T +V I+ + + +
Sbjct: 777 RGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQ 836
Query: 197 AKEILLSM 204
A+E+L M
Sbjct: 837 ARELLKEM 844
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 88/226 (38%), Gaps = 36/226 (15%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS------- 56
RG PD T++SL + YF +G K + + M+ G+ P+ T +
Sbjct: 707 RGFIPDTVTFNSLMHGYF-------VGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 759
Query: 57 ---------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
P TYNALI G +G ++ ++ I M GL P
Sbjct: 760 DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS 819
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLA 155
+YN++IS F + + +A EL EM KR + Y +++ GL + + + A
Sbjct: 820 TYNVLISEFANVGKMLQARELLKEMG-KRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKA 878
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
E +L + GY+ + T SK +A+ L
Sbjct: 879 MYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFL 924
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 110/289 (38%), Gaps = 45/289 (15%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+L+N G +V L M+ GV D + Y +LI + G E AL
Sbjct: 474 ALVNHLKRIGRIKEVKGLVKDMVSKGVTLD-------QINYTSLIDVFFKGGDEEAALAW 526
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
M E G+ D VSYN++ISG + + G + K M EK I
Sbjct: 527 AEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYK-GMREKGI--------------EP 571
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
D ++ +MN QGD E L ++ G ++ ++ + L + + EA IL
Sbjct: 572 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 631
Query: 202 LSMISNSCLSKTTH---TTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
N + H TTY ++ S ++ + + H+T+L
Sbjct: 632 -----NQMMLMEIHPNLTTYRIFLDTSSKHKRADAI---------------FKTHETLLS 671
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
K VYN LI C+ KA + M GF+P + +L+
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLM 720
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 87/206 (42%), Gaps = 28/206 (13%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG+ D Y+ L + F G+ + ++ + +P+ +V
Sbjct: 320 MVVRGIPVDLVVYTVLMDGLFK-------AGDLREAEKTFKMLLEDNQVPN-------VV 365
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY AL+ G C G + A I+ M E + P+ V+Y+ +I+G+ + +A L +M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+++ + + + Y ++++ G E A L +E+ G +
Sbjct: 426 EDQNV--------------VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471
Query: 181 ESVFINGLSKKARTREAKEILLSMIS 206
+N L + R +E K ++ M+S
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVS 497
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 111/257 (43%), Gaps = 40/257 (15%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P +VTYN +I GYC G+ ++A+ LR M G D ++Y +I + G L
Sbjct: 255 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 314
Query: 117 KMEMDEKRIL-----------------RMEE--VVYESLMQGLSDEDA--YSSLMNDYLA 155
EMDEK I ++ E V+E++++ S + Y+ L++ Y
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTH 215
G +E A L + +G+ + VT SV +NGL K R EA + H
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF-------------H 421
Query: 216 TT-YDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVE 274
T +D L N+ F S L+ G G V EA R + M D YN LI
Sbjct: 422 TCRFDGL---AINSMFYS--SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476
Query: 275 HCRCKNVDKAYNMYTRM 291
+ + VD+A ++ RM
Sbjct: 477 FTKHRKVDEAIALFKRM 493
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 34/248 (13%)
Query: 57 PSLVTYNALIYGYCF-LGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
P++ + N LI C G V+ L I MP+ G PD+ +Y +ISG CR +A +
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK 213
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L EM EK VV Y+SL+N ++++A E+ G
Sbjct: 214 LFTEMVEKDC--APTVV------------TYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLV 234
T S ++GL K R+ +A E+ M++ C + TY LI C + + V
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGC--RPNMVTYTTLITGLCKEQKIQEAV 317
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
EL+ ++GL KPD G+Y +I C +A N M+
Sbjct: 318 ELLDRMNLQGL----------------KPDAGLYGKVISGFCAISKFREAANFLDEMILG 361
Query: 295 GFVPHMFS 302
G P+ +
Sbjct: 362 GITPNRLT 369
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 116/285 (40%), Gaps = 30/285 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG PD TY +L I+ C G + L +M+ +P++V
Sbjct: 183 MPKRGCDPDSYTYGTL-------ISGLCRFGRIDEAKKLFTEMVEKDC-------APTVV 228
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY +LI G C V+EA+ L M G+ P+ +Y+ ++ G C+ +A EL EM
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL-FEM 287
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYS---SLMNDYLAQGDMEKAYILDREIA------- 170
R R V Y +L+ GL E L++ QG A + + I+
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Query: 171 ---HDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSN 227
+L E + + N L+ + + E++ + +N T Y ++ +
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN--YPSRAFTLYLSMRSRGIS 405
Query: 228 NEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
E ++L LVK +G +A + D ++ P G + LI
Sbjct: 406 VEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 93/229 (40%), Gaps = 41/229 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G+ P+ TYSSL ++ C G + L + M+ G P++V
Sbjct: 253 MKSKGIEPNVFTYSSL-------MDGLCKDGRSLQAMELFEMMMARGC-------RPNMV 298
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G C +++EA+ +L M GL PDA Y VISGFC I + +A EM
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Query: 121 -----------------DEKRILRMEEVVYESLM---------QGLSDE-DAYSSLMNDY 153
++R Y S +G+S E + SL+
Sbjct: 359 ILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCL 418
Query: 154 LAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
+G+ +KA L EI DG + T + I K EA + LL
Sbjct: 419 CKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLL 467
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 38/270 (14%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
+++ YC G+ K L M G + V+YN LI G+C G + AL +
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGF-------RATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M + GL P+ V++N +I GFCR + +A ++ EM + +
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV--------------APN 342
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
Y++L+N Y QGD E A+ ++ +G + +T + I GL K+A+TR+A + +
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
+ + + + +T+ ALI + + V+ RG + +M+
Sbjct: 403 ELDKENLVPNS--STFSALI----------MGQCVRKNADRGF-----ELYKSMIRSGCH 445
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
P+ +N L+ CR ++ D A + MV
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 121/296 (40%), Gaps = 39/296 (13%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
SL + +F ++ QM G LP ++ + NA + GRV+ AL
Sbjct: 173 SLFKTFAHLKKFRNATDTFMQMKDYGFLP-------TVESCNAYMSSLLGQGRVDIALRF 225
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
R M +SP+ + N+V+SG+CR + K EL +M E+ R +V Y +L+ G
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM-ERLGFRATDVSYNTLIAG-- 282
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
+ +G + A L + G VT + I+G + + +EA ++
Sbjct: 283 -----------HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 202 LSMIS-NSCLSKTTHTT-----------------YDALIENCSNNEFKSLVELVKGFRMR 243
M + N + T+ T Y+ ++ N + + L+ G +
Sbjct: 332 GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQ 391
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+AA+ + N P+ ++ LI+ C KN D+ + +Y M+ G P+
Sbjct: 392 AKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LIN Y G+ ++ M+ NG+ D ++TYNALI+G C + +A
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD-------ILTYNALIFGLCKQAKTRKA 397
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
++ + + L P++ +++ +I G C + + +EL Y+S+++
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFEL----------------YKSMIR 441
Query: 139 G--LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
+E ++ L++ + D + A + RE+ +S T NGL + + +
Sbjct: 442 SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQL 501
Query: 197 AKEILLSM 204
K++L M
Sbjct: 502 VKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 38/270 (14%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
+++ YC G+ K L M G + V+YN LI G+C G + AL +
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGF-------RATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M + GL P+ V++N +I GFCR + +A ++ EM + +
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV--------------APN 342
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
Y++L+N Y QGD E A+ ++ +G + +T + I GL K+A+TR+A + +
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
+ + + + +T+ ALI + + V+ RG + +M+
Sbjct: 403 ELDKENLVPNS--STFSALI----------MGQCVRKNADRGF-----ELYKSMIRSGCH 445
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
P+ +N L+ CR ++ D A + MV
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 121/296 (40%), Gaps = 39/296 (13%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
SL + +F ++ QM G LP ++ + NA + GRV+ AL
Sbjct: 173 SLFKTFAHLKKFRNATDTFMQMKDYGFLP-------TVESCNAYMSSLLGQGRVDIALRF 225
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
R M +SP+ + N+V+SG+CR + K EL +M E+ R +V Y +L+ G
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM-ERLGFRATDVSYNTLIAG-- 282
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
+ +G + A L + G VT + I+G + + +EA ++
Sbjct: 283 -----------HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 202 LSMIS-NSCLSKTTHTT-----------------YDALIENCSNNEFKSLVELVKGFRMR 243
M + N + T+ T Y+ ++ N + + L+ G +
Sbjct: 332 GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQ 391
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+AA+ + N P+ ++ LI+ C KN D+ + +Y M+ G P+
Sbjct: 392 AKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LIN Y G+ ++ M+ NG+ D ++TYNALI+G C + +A
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD-------ILTYNALIFGLCKQAKTRKA 397
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
++ + + L P++ +++ +I G C + + +EL Y+S+++
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFEL----------------YKSMIR 441
Query: 139 G--LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
+E ++ L++ + D + A + RE+ +S T NGL + + +
Sbjct: 442 SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQL 501
Query: 197 AKEILLSM 204
K++L M
Sbjct: 502 VKKLLQEM 509
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 123/297 (41%), Gaps = 50/297 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT--GSPSLVTY 62
GL PD TY++L +A C S+ SNL + V D P L TY
Sbjct: 292 GLRPDAITYNTLLSA--------C-----SRDSNLDGAV---KVFEDMEAHRCQPDLWTY 335
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
NA+I Y G EA + + G PDAV+YN ++ F R R K E+ +M +
Sbjct: 336 NAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAH-DGYLSESVTE 181
M DE Y+++++ Y QG ++ A L +++ G +++T
Sbjct: 396 --------------MGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITY 441
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFR 241
+V I+ L K RT EA ++ M+ K T TY ALI C G+
Sbjct: 442 TVLIDSLGKANRTVEAAALMSEMLDVGI--KPTLQTYSALI--C-------------GYA 484
Query: 242 MRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
G EA ML KPD Y+ ++ R KA+ +Y M+ G P
Sbjct: 485 KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTP 541
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 129/323 (39%), Gaps = 54/323 (16%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+G PD TY+SL A+ N KV ++ QM G D +T YN
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNT-------EKVKEVYQQMQKMGFGKDEMT-------YN 406
Query: 64 ALIYGYCFLGRVEEALGILRGMPEM-GLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
+I+ Y G+++ AL + + M + G +PDA++Y ++I + +A L EM +
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 123 KRILRMEEVVYESLMQGLSD-------EDAYS--------------SLMNDYLAQG-DME 160
I + Y +L+ G + ED +S S+M D L +G +
Sbjct: 467 VGI-KPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETR 525
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM---------------I 205
KA+ L R++ DG+ + I GL K+ R+ + ++ + M +
Sbjct: 526 KAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLV 585
Query: 206 SNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDG 265
C A I N E +L+ ++ + G SEA + +
Sbjct: 586 KGECFDLAARQLKVA-ITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKR 644
Query: 266 GVYNFLIVEHCRCKNVDKAYNMY 288
+ LIV HC+ N+ A + Y
Sbjct: 645 LITEALIVLHCKVNNLSAALDEY 667
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 118/290 (40%), Gaps = 42/290 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +I AY + K ++ + +G PD L T+N+L+ Y G E A
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPD-------LKTWNSLMSAYAQCGCYERAR 807
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
I M G SP S NI++ C + R+ + VV E G
Sbjct: 808 AIFNTMMRDGPSPTVESINILLHALCV---------------DGRLEELYVVVEELQDMG 852
Query: 140 LSDEDAYSSLMNDYLAQ-GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ LM D A+ G++ + + + GYL + I L K R R+A
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA- 911
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNE-FKSLVELVKGFRMRGLVSEAARAHDTML 257
EI++S + + K ++++++ + E +K V++ + + GL
Sbjct: 912 EIMVSEMEEANF-KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGL------------ 958
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+PD YN LI+ +CR + ++ Y + +M + G P + + +LI
Sbjct: 959 ----EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLI 1004
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
L +N+++ Y + ++ + + + + E GL PD +YN +I +CR R P + Y L
Sbjct: 927 LAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLL-- 984
Query: 119 EMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY-LSE 177
M + R L ++ + D Y SL++ + Q +E+A L E+ G L
Sbjct: 985 -MQQMRNLGLDPKL-----------DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDR 1032
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
S ++ +S+ + + E LL M+ N+ + T T +
Sbjct: 1033 SFYHTMM--KISRDSGSDSKAEKLLQMMKNAGIEPTLATMH 1071
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 67/320 (20%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSL--------- 59
++G + +F Y +LI+ YC + ++ D+M +GV P+ VT + +
Sbjct: 231 EKGVFPDIF-TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRM 289
Query: 60 ------------------VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVI 101
VTY LI GYC + ++EAL + M G SP V+YN ++
Sbjct: 290 REATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSIL 349
Query: 102 SGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGD 158
C RIRE + L EM K+I D ++L+N Y D
Sbjct: 350 RKLCEDGRIREANR---LLTEMSGKKI--------------EPDNITCNTLINAYCKIED 392
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
M A + +++ G + + I+G K AKE L SMI + TY
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF--SPGYATY 450
Query: 219 DALIENCSN-NEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
L++ N N+ + +L++ F RGL ++ A +Y LI C+
Sbjct: 451 SWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA----------------LYRGLIRRICK 494
Query: 278 CKNVDKAYNMYTRMVHYGFV 297
+ VD A ++ M G V
Sbjct: 495 LEQVDYAKVLFESMEKKGLV 514
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 37/247 (14%)
Query: 81 ILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL 140
I + M ++G+ + YN+++ + +P KA +L EM+EK +
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVF-------------- 235
Query: 141 SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEI 200
D Y++L++ Y + +A + + G VT + FI+G S++ R REA +
Sbjct: 236 PDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRL 295
Query: 201 LLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGL-------------- 245
+ + H TY LI+ C N+ + L + RG
Sbjct: 296 FREIKDDVT---ANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 246 -----VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ EA R M +PD N LI +C+ +++ A + +M+ G M
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 301 FSVLALI 307
+S ALI
Sbjct: 413 YSYKALI 419
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 131/322 (40%), Gaps = 52/322 (16%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+L++ +C E +L M+ GV P+L YN LI+G+C G + EA+G+
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGV-------DPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
L M + LSPD +Y I+I+G C + +A L +M +RI Y SL+ G
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP-SSATYNSLIHGYC 420
Query: 142 DE----------------------DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
E +S+L++ Y D++ A L E+ G + + V
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENC-------------- 225
T + I+ K+A +EA + M+ + H T+ L++
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAG-IHPNDH-TFACLVDGFWKEGRLSVAIDFYQ 538
Query: 226 SNNEFKS------LVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
NN+ +S L++G G + A+R M PD Y ++ H + K
Sbjct: 539 ENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEK 598
Query: 280 NVDKAYNMYTRMVHYGFVPHMF 301
+ + M+ G +P++
Sbjct: 599 RITDTMMLQCDMIKTGILPNLL 620
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 133/336 (39%), Gaps = 68/336 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ RGL PD Y LF F G +SK L D+M G+ P+ +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFK-------QGLYSKKEKLLDEMTSLGIKPNVYIYTIYIL 242
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P+L TY+A+I GYC G V +A G+ + + L P
Sbjct: 243 DLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP 302
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ V + ++ GFC+ RE A L + M + ++ +Y Y+ L++
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVK---FGVDPNLY-----------VYNCLIHG 348
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
+ G+M +A L E+ + T ++ INGL + + EA + M +
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPS 408
Query: 213 TTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
+ TY++LI C + ++L G+ +P+ ++ L
Sbjct: 409 S--ATYNSLIHGYCKEYNMEQALDLCSEMTASGV----------------EPNIITFSTL 450
Query: 272 IVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
I +C +++ A +Y M G VP + + ALI
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 124/322 (38%), Gaps = 52/322 (16%)
Query: 7 SPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALI 66
SPD A S++N F V + MI G++PD V ++
Sbjct: 161 SPDS-------KACLSILNGLVRRRRFDSVWVDYQLMISRGLVPD--------VHIYFVL 205
Query: 67 YGYCF-LGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
+ CF G + +L M +G+ P+ Y I I CR + KME EK
Sbjct: 206 FQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR--------DNKMEEAEKMF 257
Query: 126 LRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
M++ G L + YS++++ Y G++ +AY L +EI L V
Sbjct: 258 ELMKK-------HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 185 INGLSKKARTREAKEILLSM---------------ISNSCLSKTTHTTYDALIE----NC 225
++G K A+ + + M I C S L E N
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 226 SNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAY 285
S + F + L+ G + V+EA R M + P YN LI +C+ N+++A
Sbjct: 371 SPDVFTYTI-LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 286 NMYTRMVHYGFVPHMFSVLALI 307
++ + M G P++ + LI
Sbjct: 430 DLCSEMTASGVEPNIITFSTLI 451
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 136/352 (38%), Gaps = 74/352 (21%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS------------------------- 56
SL+N +C G S+ L DQM+ G PD VT +
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 57 ---PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA 113
P LVTY A+I G C G + AL +L M + + D V YN +I G C+ + A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 114 YELKMEMDEKRILRMEEVVYESLMQGLSD----EDA------------------YSSLMN 151
++L +M+ K I + + Y L+ L + DA +++L++
Sbjct: 270 FDLFNKMETKGI-KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 152 DYLAQGDMEKAYIL-DREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL 210
++ +G + +A L D + + V + I G K R E E+ M +
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 211 SKTTHTTYDALI------ENCSNNE--FKSLVE------------LVKGFRMRGLVSEAA 250
T TY LI +C N + FK +V L+ G G V A
Sbjct: 389 GNT--VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 251 RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+ M + K D Y +I C+ V+ ++++ + G P++ +
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 24/300 (8%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y IN +C + S + +M+ G PS+VT N+L+ G+C R+ EA
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGY-------GPSIVTLNSLLNGFCHGNRISEA 164
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ ++ M EMG PD V++ ++ G + + +A L M K + + V Y +++
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVTYGAVIN 223
Query: 139 GL---SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTR 195
GL + D +L+N + +G +E ++ I DG + F L K T+
Sbjct: 224 GLCKRGEPDLALNLLNK-MEKGKIEADVVIYNTII-DGLCKYKHMDDAF--DLFNKMETK 279
Query: 196 EAKEILLS---MISNSC----LSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSE 248
K + + +IS C S + D L +N N + L+ F G + E
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI-NPDLVFFNALIDAFVKEGKLVE 338
Query: 249 AARAHDTMLHGNHK-PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
A + +D M+ H PD YN LI C+ K V++ ++ M G V + + LI
Sbjct: 339 AEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 123/297 (41%), Gaps = 46/297 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML + ++PD FNA LI+A+ G+ + L+D+M+ + P +V
Sbjct: 311 MLEKNINPD----LVFFNA---LIDAFVKEGKLVEAEKLYDEMVKSK------HCFPDVV 357
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YN LI G+C RVEE + + R M + GL + V+Y +I GF + R+ A + +M
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ + V+ +M Y+ L++ G++E A ++ + + VT
Sbjct: 418 -------VSDGVHPDIM-------TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 181 ESVFINGLSKKARTREAKEILLSM-ISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
+ I L K + + ++ S+ + + T+TT ++ G
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT------------------MMSG 505
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
F +GL EA M P+ G YN LI R + + + M GF
Sbjct: 506 FCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 115/263 (43%), Gaps = 33/263 (12%)
Query: 47 GVLPDFVTGSP--SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGF 104
G+ D V P S+V ++ L+ + + + + + M +G+S + +Y+I I+ F
Sbjct: 61 GLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYF 120
Query: 105 CRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYI 164
CR + A + + +M ++ Y + L +SL+N + + +A
Sbjct: 121 CRRSQLSLALAI--------LGKMMKLGYGPSIVTL------NSLLNGFCHGNRISEAVA 166
Query: 165 LDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN 224
L ++ GY ++VT + ++GL + + EA ++ M+ C + TY A+I
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC--QPDLVTYGAVIN- 223
Query: 225 CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKA 284
G RG A + M G + D +YN +I C+ K++D A
Sbjct: 224 --------------GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 285 YNMYTRMVHYGFVPHMFSVLALI 307
++++ +M G P +F+ LI
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLI 292
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 49/216 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSP--- 57
M RGL + TY++L + +F + + QM+ +GV PD +T +
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQ-------ARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 58 -------------------------SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+VTY +I C G+VE+ + + G+ P
Sbjct: 435 GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ V+Y ++SGFCR +A L +EM E L + Y++L+
Sbjct: 495 NVVTYTTMMSGFCRKGLKEEADALFVEMKED--------------GPLPNSGTYNTLIRA 540
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
L GD + L +E+ G+ ++ T + N L
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 49/226 (21%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS------- 56
+G+ P+ TY+ + I+++C G +S L MI + PD VT S
Sbjct: 39 KGIFPNVLTYNCM-------IDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFV 91
Query: 57 ---------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
P+ +TYN++I G+C RV++A +L M G SPD V
Sbjct: 92 KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLA 155
+++ +I+G+C+ + E+ EM + I +++ Y++L++ +
Sbjct: 152 TFSTLINGYCKAKRVDNGMEIFCEMHRRGI--------------VANTVTYTTLIHGFCQ 197
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
GD++ A L E+ G + +T + GL K R+A IL
Sbjct: 198 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAIL 243
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 40/265 (15%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
++++ C G NL +M G+ P+ ++TYN +I +C GR +A +
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPN-------VLTYNCMIDSFCHSGRWSDADQL 67
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
LR M E ++PD V+++ +I+ F + R+ +A E+ EM LR ++ + +
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM-----LRWS--IFPTTI---- 116
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
Y+S+++ + Q ++ A + +A G + VT S ING K R EI
Sbjct: 117 ---TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Query: 202 LSMISNSCLSKT-THTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGN 260
M ++ T T+TT L+ GF G + A + M+
Sbjct: 174 CEMHRRGIVANTVTYTT------------------LIHGFCQVGDLDAAQDLLNEMISCG 215
Query: 261 HKPDGGVYNFLIVEHCRCKNVDKAY 285
PD ++ ++ C K + KA+
Sbjct: 216 VAPDYITFHCMLAGLCSKKELRKAF 240
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 33/241 (13%)
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
+V A++ C G A + M E G+ P+ ++YN +I FC A +L
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 119 EMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
M EK+I D +S+L+N ++ + + +A + +E+ +
Sbjct: 70 HMIEKQI--------------NPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTT 115
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELV 237
+T + I+G K+ R +AK +L SM S C T+ LI C + +E+
Sbjct: 116 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDV--VTFSTLINGYCKAKRVDNGMEIF 173
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
RG+V+ + T++HG C+ ++D A ++ M+ G
Sbjct: 174 CEMHRRGIVANTV-TYTTLIHG---------------FCQVGDLDAAQDLLNEMISCGVA 217
Query: 298 P 298
P
Sbjct: 218 P 218
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G SPD T+S+L IN YC + +M G++ + V
Sbjct: 141 MASKGCSPDVVTFSTL-------INGYCKAKRVDNGMEIFCEMHRRGIVAN-------TV 186
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
TY LI+G+C +G ++ A +L M G++PD ++++ +++G C +E KA+ +
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 31/223 (13%)
Query: 85 MPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDED 144
M + + D V ++ C+ A L EM EK I + +++
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGI-------FPNVL------- 46
Query: 145 AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
Y+ +++ + G A L R + + VT S IN K+ + EA+EI M
Sbjct: 47 TYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM 106
Query: 205 ISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
+ S T TY+++I+ GF + V +A R D+M PD
Sbjct: 107 LRWSIFPTTI--TYNSMID---------------GFCKQDRVDDAKRMLDSMASKGCSPD 149
Query: 265 GGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++ LI +C+ K VD ++ M G V + + LI
Sbjct: 150 VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 192
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 47/273 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M G+SP+ TY+ SL+N C + + D+M + GV D +
Sbjct: 610 MCGNGISPNVITYT-------SLMNGLCKNNRMDQALEMRDEMKNKGVKLD-------IP 655
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
Y ALI G+C +E A + + E GL+P YN +ISGF + A +L +M
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
L GL D Y++L++ L G++ A L E+ G + + +
Sbjct: 716 ---------------LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEI 760
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
+V +NGLSKK + + ++ M K + T + LI N ++ G
Sbjct: 761 IYTVIVNGLSKKGQFVKVVKMFEEM-------KKNNVTPNVLIYNA----------VIAG 803
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
G + EA R HD ML PDG ++ L+
Sbjct: 804 HYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 122/281 (43%), Gaps = 40/281 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y S+I+ + GE +++M NG+ SP+++TY +L+ G C R+++A
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGI-------SPNVITYTSLMNGLCKNNRMDQA 638
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L + M G+ D +Y +I GFC+ A L E+ L +
Sbjct: 639 LEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL---------------LEE 683
Query: 139 GLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
GL+ + Y+SL++ + G+M A L +++ DG + T + I+GL K A
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
E+ M + D +I +V G +G + + + M
Sbjct: 744 SELYTEM-------QAVGLVPDEIIYTV----------IVNGLSKKGQFVKVVKMFEEMK 786
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
N P+ +YN +I H R N+D+A+ ++ M+ G +P
Sbjct: 787 KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 124/308 (40%), Gaps = 44/308 (14%)
Query: 11 GTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYC 70
G S+F+ + ++I + G + + L D+ F TG ++ N ++ C
Sbjct: 404 GLTPSVFHVH-TIIQGWLKGQKHEEALKLFDE--------SFETGLANVFVCNTILSWLC 454
Query: 71 FLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEE 130
G+ +EA +L M G+ P+ VSYN V+ G CR + MD RI
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR----------QKNMDLARI----- 499
Query: 131 VVYESLMQGLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLS 189
V L +GL + YS L++ D + A + + V INGL
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 190 KKARTREAKEILLSMISN-----SCLSKTT-----------HTTYDALIENCSNNEFKSL 233
K +T +A+E+L +MI SC+S + + A E C N ++
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 234 V---ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTR 290
+ L+ G + +A D M + K D Y LI C+ N++ A +++
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSE 679
Query: 291 MVHYGFVP 298
++ G P
Sbjct: 680 LLEEGLNP 687
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 125/325 (38%), Gaps = 50/325 (15%)
Query: 24 INAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILR 83
++A ++ L+ +M+ GV D VT L+ + EAL +L
Sbjct: 205 LSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQ-------LLMRASLREEKPAEALEVLS 257
Query: 84 GMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM-----Q 138
E G PD++ Y++ + C+ + A L EM EK++ + Y S++ Q
Sbjct: 258 RAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 317
Query: 139 G-------LSDE----------DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
G L DE A +SL+ + D+ A +L ++ +G SVT
Sbjct: 318 GNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTF 377
Query: 182 SVFINGLSKKARTREAKEILLSM----ISNSCLSKTTHTTYDALIENCSNNEFKSLVE-- 235
SV I K +A E M ++ S HT ++ + E L +
Sbjct: 378 SVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFH--VHTIIQGWLKGQKHEEALKLFDES 435
Query: 236 -------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
++ +G EA M P+ YN +++ HCR KN+D
Sbjct: 436 FETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMD 495
Query: 283 KAYNMYTRMVHYGFVPHMFSVLALI 307
A +++ ++ G P+ ++ LI
Sbjct: 496 LARIVFSNILEKGLKPNNYTYSILI 520
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 14/112 (12%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL PDE Y+ + +N G+F KV + ++M N V +P+++ YNA
Sbjct: 754 GLVPDEIIYTVI-------VNGLSKKGQFVKVVKMFEEMKKNNV-------TPNVLIYNA 799
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
+I G+ G ++EA + M + G+ PD +++I++SG +P +A L
Sbjct: 800 VIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 50/298 (16%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y S+I A G L D+M+ +G+ S ++V +LI G+C + A
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGI-------SMNVVAATSLITGHCKNNDLVSA 358
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVY--ESL 136
L + M + G SP++V+++++I F + E KA E +M+ +L + V+ ++
Sbjct: 359 LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME---VLGLTPSVFHVHTI 415
Query: 137 MQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
+QG +L E+A L E G + V ++ ++ L K+ +T E
Sbjct: 416 IQG-------------WLKGQKHEEALKLFDESFETGLANVFVCNTI-LSWLCKQGKTDE 461
Query: 197 AKEILLSMISNSCLSKTTHTTYDALIENCSNNE-------FKSLVELVKGFRMRG----- 244
A E LLS + + + + + ++ +C F +++E KG +
Sbjct: 462 ATE-LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE--KGLKPNNYTYSI 518
Query: 245 LVSEAARAHDT---------MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
L+ R HD M N + +G VY +I C+ KA + M+
Sbjct: 519 LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 86/187 (45%), Gaps = 28/187 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L GL+P + Y+SL + + +L G +L+ +M+ +G+ D L
Sbjct: 680 LLEEGLNPSQPIYNSLISGFRNL-------GNMVAALDLYKKMLKDGLRCD-------LG 725
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G G + A + M +GL PD + Y ++++G + + K ++ EM
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+K + ++Y +++ G + +G++++A+ L E+ G L + T
Sbjct: 786 -KKNNVTPNVLIYNAVIAG-------------HYREGNLDEAFRLHDEMLDKGILPDGAT 831
Query: 181 ESVFING 187
+ ++G
Sbjct: 832 FDILVSG 838
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 37/274 (13%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+ T+N I+G+C RVEEAL ++ M G P +SY +I +C+ E K YE
Sbjct: 221 TPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYE 280
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+ EM+ + Y+++M+ AQ + E+A + + G
Sbjct: 281 MLSEMEAN--------------GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK 326
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLV 234
+S+ + I+ L++ R EA+ + + +S T +TY+++I C ++E +
Sbjct: 327 PDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINT-STYNSMIAMYCHHDEEDKAI 385
Query: 235 ELVKGFR--------------------MRGLVSEAARAHDTMLHGNH-KPDGGVYNFLIV 273
EL+K RG V E + M+ +H D Y FLI
Sbjct: 386 ELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Query: 274 EHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
CR + AY ++ M+ P + L L+
Sbjct: 446 RLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 37/274 (13%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+ T+N I+G+C RVEEAL ++ M G P +SY +I +C+ E K YE
Sbjct: 221 TPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYE 280
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+ EM+ + Y+++M+ AQ + E+A + + G
Sbjct: 281 MLSEMEAN--------------GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK 326
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLV 234
+S+ + I+ L++ R EA+ + + +S T +TY+++I C ++E +
Sbjct: 327 PDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINT-STYNSMIAMYCHHDEEDKAI 385
Query: 235 ELVKGFR--------------------MRGLVSEAARAHDTMLHGNH-KPDGGVYNFLIV 273
EL+K RG V E + M+ +H D Y FLI
Sbjct: 386 ELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Query: 274 EHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
CR + AY ++ M+ P + L L+
Sbjct: 446 RLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 40/266 (15%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+GL P+ +Y+ L I AYC E+ S L QM G PD +VTY
Sbjct: 374 KGLIPNNLSYAPL-------IQAYCKSKEYDIASKLLLQMAERGCKPD-------IVTYG 419
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
LI+G G +++A+ + + + G+SPDA YN+++SG C+ A L EM ++
Sbjct: 420 ILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR 479
Query: 124 RILRMEEVVYESLMQG---------------LSDEDA-------YSSLMNDYLAQGDMEK 161
IL + VY +L+ G LS E +++++ + G +++
Sbjct: 480 NILP-DAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538
Query: 162 AYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDAL 221
A + + + + T S I+G K+ A +I M N C K TY +L
Sbjct: 539 ALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC--KPNVVTYTSL 596
Query: 222 IEN-CSNNEFKSLVELVKGFRMRGLV 246
I C +FK E K ++R LV
Sbjct: 597 INGFCCQGDFKMAEETFKEMQLRDLV 622
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 32/308 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML R + PD Y++L I+ + G+F + + + GV D +V
Sbjct: 476 MLDRNILPDAYVYATL-------IDGFIRSGDFDEARKVFSLSVEKGVKVD-------VV 521
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+NA+I G+C G ++EAL + M E L PD +Y+ +I G+ + ++ A ++ M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++ + VV Y+SL+N + QGD + A +E+ + VT
Sbjct: 582 EKNKC--KPNVV------------TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 181 ESVFINGLSKKARTREAKEILLS-MISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
+ I L+K++ T E M++N C+ T++ L++ ++ G
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVP--NEVTFNCLLQGFVKKTSGKVLAEPDG 685
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
G S + M YN +V C V A +MV GF P
Sbjct: 686 SN-HGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPD 744
Query: 300 MFSVLALI 307
S A++
Sbjct: 745 PVSFAAIL 752
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 31/251 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P + TYN LI C G+ E A+G L + GL P+ +SY +I +C+ +E A +L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
++M E R + + V Y L+ GL S M+D + K ++DR ++ D +
Sbjct: 403 LLQMAE-RGCKPDIVTYGILIHGL----VVSGHMDDAVNM----KVKLIDRGVSPDAAIY 453
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
++ ++GL K R AK + M+ + L DA + L
Sbjct: 454 -----NMLMSGLCKTGRFLPAKLLFSEMLDRNILP-------DAYV----------YATL 491
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+ GF G EA + + K D +N +I CR +D+A RM
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 297 VPHMFSVLALI 307
VP F+ +I
Sbjct: 552 VPDKFTYSTII 562
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 104/272 (38%), Gaps = 38/272 (13%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR---------- 106
P++V YN +I GYC LG +E A + + + G P ++ +I+GFC+
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 107 ---IREPG---KAYELKMEMDEK-----RILRMEEVVYESLMQGLSDEDAYSSLMNDYLA 155
++E G + L +D K ++ E + + D Y+ L+N
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTH 215
+G E A E + G + +++ + I K A ++LL M C K
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC--KPDI 415
Query: 216 TTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEH 275
TY LI G + G + +A ++ PD +YN L+
Sbjct: 416 VTYGILIH---------------GLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 276 CRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C+ A +++ M+ +P + LI
Sbjct: 461 CKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 96/244 (39%), Gaps = 33/244 (13%)
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ G C G+VE ++ G G P+ V YN +I G+C++ + AY
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAY---------- 260
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
L +E+ + M L + + +++N + +GD + L E+ G +
Sbjct: 261 -LVFKELKLKGFMPTL---ETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNI 316
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMR 243
I+ + + E + +I+N C K TY+ LI C + + V + +
Sbjct: 317 IDAKYRHGYKVDPAESIGWIIANDC--KPDVATYNILINRLCKEGKKEVAVGFLDEASKK 374
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSV 303
GL+ P+ Y LI +C+ K D A + +M G P + +
Sbjct: 375 GLI----------------PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Query: 304 LALI 307
LI
Sbjct: 419 GILI 422
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 128/294 (43%), Gaps = 50/294 (17%)
Query: 8 PDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIY 67
P+ TYS+L + F A+ E V D + G+ PD P VT+N +I
Sbjct: 230 PNSITYSTLMDCLF----AHSRSKE--AVELFEDMISKEGISPD-----P--VTFNVMIN 276
Query: 68 GYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILR 127
G+C G VE A IL M + G +P+ +Y+ +++GFC++ GK E K DE +
Sbjct: 277 GFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKV---GKIQEAKQTFDEVK--- 330
Query: 128 MEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFIN 186
GL D Y++LMN + G+ ++A L E+ ++++T +V +
Sbjct: 331 ---------KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILR 381
Query: 187 GLSKKARTREAKEILLSMISNSC-LSKTTH-TTYDALIENCSNNEFKSLVELVKGFRMRG 244
GLS + R+ EA ++L S L+K ++ +AL C N E + V+ + RG
Sbjct: 382 GLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNAL---CCNGELEKAVKFLSVMSERG 438
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+ P +N L+V C + + + G +P
Sbjct: 439 IW----------------PHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIP 476
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 75/204 (36%), Gaps = 29/204 (14%)
Query: 88 MGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYS 147
+GL P+ +NI++ C+ + A+ + EM I + Y +LM L
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL------- 242
Query: 148 SLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISN 207
+ E + + I+ +G + VT +V ING + AK+IL M N
Sbjct: 243 -----FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKN 297
Query: 208 SCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGV 267
C N + L+ GF G + EA + D + K D
Sbjct: 298 GC-----------------NPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVG 340
Query: 268 YNFLIVEHCRCKNVDKAYNMYTRM 291
Y L+ CR D+A + M
Sbjct: 341 YTTLMNCFCRNGETDEAMKLLGEM 364
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 45/307 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML SP+ T+ L + + G S + D M G+ SP+ V
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYK-------KGRTSDAQKMFDDMTGRGI-------SPNRV 234
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G C G ++A + M G PD+V++N ++ GFC++ +A+EL + +
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL-LRL 293
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
EK + Y SL+ GL Y+ Y A +L + I D L
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELY--------ANMLKKNIKPDIILY---- 341
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
++ I GLSK + +A ++L SM S +S T+ Y+A+I K
Sbjct: 342 -TILIQGLSKAGKIEDALKLLSSMPSKG-ISPDTY-CYNAVI---------------KAL 383
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
RGL+ E M PD + LI CR V +A ++T + G P +
Sbjct: 384 CGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSV 443
Query: 301 FSVLALI 307
+ ALI
Sbjct: 444 ATFNALI 450
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 120/297 (40%), Gaps = 46/297 (15%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
Y SLI+ +++ L+ M+ + PD ++ Y LI G G++E
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD-------IILYTILIQGLSKAGKIE 355
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL 136
+AL +L MP G+SPD YN VI C G+ ++E R L++E ES
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALC-----GRGL-----LEEGRSLQLEMSETES- 404
Query: 137 MQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
D ++ L+ G + +A + EI G T + I+GL K +E
Sbjct: 405 ---FPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKE 461
Query: 197 AKEILLSM---ISNSCLSKTTHTTYDALIENCSNNEFKSLVE---LVKGFRMRGLVSEAA 250
A+ +L M S + +H+ N F ++VE ++K +R + A
Sbjct: 462 ARLLLHKMEVGRPASLFLRLSHS---------GNRSFDTMVESGSILKAYR------DLA 506
Query: 251 RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
DT PD YN LI CR ++D A + + G P + LI
Sbjct: 507 HFADT----GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
SP +V+YN LI G+C G ++ AL +L + GLSPD+V+YN +I+G R+ +A++
Sbjct: 514 SPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFK 573
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L D+ R VY SLM + N ++ ++K LD E A++
Sbjct: 574 LFYAKDD---FRHSPAVYRSLMTWSCRKRKVLVAFNLWMKY--LKKISCLDDETANE--- 625
Query: 176 SESVTESVFINGLSKKARTR 195
E F G +++A R
Sbjct: 626 ----IEQCFKEGETERALRR 641
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 111/284 (39%), Gaps = 41/284 (14%)
Query: 48 VLPDFVTGSPSLVTYN--ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC 105
L + +G S+ +Y LI Y +G E+A+ M E PD +YN++
Sbjct: 114 TLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVI----- 168
Query: 106 RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYS--SLMNDYLAQGDMEKAY 163
L++ M E+ + VY +++ + Y+ LM+ +G A
Sbjct: 169 ----------LRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQ 218
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
+ ++ G VT ++ I+GL ++ +A+++ M ++ + ++AL++
Sbjct: 219 KMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSG--NYPDSVAHNALLD 276
Query: 224 N-CSNNEFKSLVELVKGFRMRGLV-------------------SEAARAHDTMLHGNHKP 263
C EL++ F G V ++A + ML N KP
Sbjct: 277 GFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKP 336
Query: 264 DGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
D +Y LI + ++ A + + M G P + A+I
Sbjct: 337 DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 102/250 (40%), Gaps = 37/250 (14%)
Query: 53 VTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGK 112
V P + +N L+ C G V+E +LR M + PDA ++N++ G+CR+R+P K
Sbjct: 228 VKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKK 286
Query: 113 AYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDM--EKAYILDREIA 170
A +L EM E G E+ D Q M E A + D I
Sbjct: 287 AMKLLEEMIE---------------AGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMIT 331
Query: 171 HDGYLSESV--TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN 228
+S T ++ I L+K + E E++ MIS CL +TY +IE
Sbjct: 332 KGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDV--STYKDVIE----- 384
Query: 229 EFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
G M V EA + D M + + PD YN + C + D+A +Y
Sbjct: 385 ----------GMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLY 434
Query: 289 TRMVHYGFVP 298
RMV P
Sbjct: 435 GRMVESRCAP 444
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G PD TY + I C+ + + D+M + G PD +V
Sbjct: 367 MISTGCLPDVSTYKDV-------IEGMCMAEKVDEAYKFLDEMSNKGYPPD-------IV 412
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN + C + +EAL + M E +P +YN++IS F + +P A+ EM
Sbjct: 413 TYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEM 472
Query: 121 DEKRILRMEEVVYESLMQGLSD 142
D++ ++ E Y +++ GL D
Sbjct: 473 DKRDCVQDVE-TYCAMINGLFD 493
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 23/181 (12%)
Query: 42 QMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVI 101
+MI G LPD + TY +I G C +V+EA L M G PD V+YN +
Sbjct: 366 RMISTGCLPD-------VSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFL 418
Query: 102 SGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEK 161
C R+ +A +L M E R Y+ L++ + D +
Sbjct: 419 RVLCENRKTDEALKLYGRMVESRC--------------APSVQTYNMLISMFFEMDDPDG 464
Query: 162 AYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDAL 221
A+ E+ + + T INGL R +EA LL + N L K + +D+
Sbjct: 465 AFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEAC-FLLEEVVNKGL-KLPYRVFDSF 522
Query: 222 I 222
+
Sbjct: 523 L 523
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 134/322 (41%), Gaps = 55/322 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G +PD + L +F+L N K + + +L F G P +
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRN-------IPKAVRVME------ILEKF--GQPDVF 159
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC--------------- 105
YNALI G+C + R+++A +L M SPD V+YNI+I C
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 106 ---RIREPGKAYELKME--MDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDM 159
+ Y + +E M E + +++ E L +GL D Y++++ +G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
++A+ + R + G + ++ ++ + L + + E ++++ M S C TY
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC--DPNVVTYS 337
Query: 220 ALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
LI C + + + + L+K + +GL PD Y+ LI CR
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLT----------------PDAYSYDPLIAAFCRE 381
Query: 279 KNVDKAYNMYTRMVHYGFVPHM 300
+D A M+ G +P +
Sbjct: 382 GRLDVAIEFLETMISDGCLPDI 403
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 131/335 (39%), Gaps = 66/335 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------ 54
ML RGL PD TY+++ I C G + + + G PD ++
Sbjct: 254 MLSRGLKPDMFTYNTI-------IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLR 306
Query: 55 ----------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P++VTY+ LI C G++EEA+ +L+ M E GL+P
Sbjct: 307 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
DA SY+ +I+ FCR A E +E ++ + L D Y++++
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEF-----------LETMISDGC---LPDIVNYNTVLAT 412
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
G ++A + ++ G S + + + L A ++L M+SN
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI--D 470
Query: 213 TTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
TY+++I +C E G+V EA M P YN ++
Sbjct: 471 PDEITYNSMI-SCLCRE--------------GMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 273 VEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ C+ ++ A N+ MV G P+ + LI
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 34/234 (14%)
Query: 70 CFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRME 129
C G E+L +L M G +PD + +I GF +R KA + ME+ EK
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKF----- 153
Query: 130 EVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESVTESVFINGL 188
G D AY++L+N + ++ A +LDR + D + ++VT ++ I L
Sbjct: 154 ---------GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD-FSPDTVTYNIMIGSL 203
Query: 189 SKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSE 248
+ + A ++L ++S++C + T TY LIE + G V E
Sbjct: 204 CSRGKLDLALKVLNQLLSDNC--QPTVITYTILIE---------------ATMLEGGVDE 246
Query: 249 AARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
A + D ML KPD YN +I C+ VD+A+ M + G P + S
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVIS 300
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 35/128 (27%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS-------- 56
G SP+ +Y+++F+A +S G+ + ++ +M+ NG+ PD +T +
Sbjct: 433 GCSPNSSSYNTMFSALWS-------SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Query: 57 --------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
PS+VTYN ++ G+C R+E+A+ +L M G P+ +
Sbjct: 486 EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETT 545
Query: 97 YNIVISGF 104
Y ++I G
Sbjct: 546 YTVLIEGI 553
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 106/274 (38%), Gaps = 42/274 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y LIN + G+ + H M +G + + ++N LI GYC G ++A
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGF-------AVTPYSFNPLIEGYCKQGLFDDA 327
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
G+ M G+ P +YNI I C A EL M
Sbjct: 328 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM------------------ 369
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
D +Y++LM+ Y+ G +A +L ++ VT + I+GL + A+
Sbjct: 370 AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ M TT + +I + LVKGF G +S A +D ML
Sbjct: 430 RLKEEM--------TTQLIFPDVI---------TYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
KPDG Y V R + DKA+ ++ MV
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMV 506
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 129/322 (40%), Gaps = 51/322 (15%)
Query: 7 SPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALI 66
+PD +Y++L + Y + G+F + S L D + + PS+VTYN LI
Sbjct: 371 APDVVSYNTLMHGYIKM-------GKFVEASLLFDDLRAGDI-------HPSIVTYNTLI 416
Query: 67 YGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRIL 126
G C G +E A + M + PD ++Y ++ GF + A E+ EM K I
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI- 475
Query: 127 RMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDRE-IAHDGYLSESVTESVFI 185
D AY++ L GD +KA+ L E +A D + + +V I
Sbjct: 476 -------------KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 522
Query: 186 NGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFK------------- 231
+GL K +A E + + H TY +I N +FK
Sbjct: 523 DGLCKVGNLVKAIEFQRKIFRVGLVPD--HVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 232 ------SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAY 285
+ L+ G G + +A + M +P+ +N L+ C+ N+D+AY
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 286 NMYTRMVHYGFVPHMFSVLALI 307
+M G P+ +S LI
Sbjct: 641 RYLCKMEEEGIPPNKYSYTMLI 662
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL PD TY+++ I Y G+F NL+D+M+ + P S++TY
Sbjct: 545 GLVPDHVTYTTV-------IRGYLENGQFKMARNLYDEMLRKRLYP-------SVITYFV 590
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LIYG+ GR+E+A M + G+ P+ +++N ++ G C+ +AY +M+E+
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
I + Y L+ D + + ++ Y +LD+EI DGY T
Sbjct: 651 I-PPNKYSYTMLISKNCDFEKWEEVVKLY--------KEMLDKEIEPDGY-----THRAL 696
Query: 185 INGLSKKARTREAK 198
L K +RE +
Sbjct: 697 FKHLEKDHESREVE 710
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 142/361 (39%), Gaps = 89/361 (24%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL+P TY++L I Y + G+ + S L D M+ G V P++ T+N
Sbjct: 145 GLNPTTSTYNTL-------IKGYGIAGKPERSSELLDLMLEEG----NVDVGPNIRTFNV 193
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR----IREPGKAYELKMEM 120
L+ +C +VEEA +++ M E G+ PD V+YN + + + + +R + E KM M
Sbjct: 194 LVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE-KMVM 252
Query: 121 DEKR--------------------------ILRMEE-------VVYESLMQGL------- 140
EK + RM+E VV+ SL+ G
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 141 ---------------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFI 185
+D YS++MN + + G MEKA + +E+ G ++ S+
Sbjct: 313 GIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 372
Query: 186 NGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGL 245
G + ++A+E+L ++I S + TT ++ G+ G
Sbjct: 373 KGYVRAKEPKKAEELLETLIVESRPNVVIFTT------------------VISGWCSNGS 414
Query: 246 VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLA 305
+ +A R + M P+ + L+ + K KA + M G P + L
Sbjct: 415 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLL 474
Query: 306 L 306
L
Sbjct: 475 L 475
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 32/198 (16%)
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
++TY+ ++ + G +E+A + + M + G+ PDA +Y+I+ G+ R +EP KA EL
Sbjct: 330 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL-- 387
Query: 119 EMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+E ++ ES + ++++++ + + G M+ A + ++ G
Sbjct: 388 ---------LETLIVESRPNVV----IFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 434
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
T + G + + +A+E+L M C K ++T+ L E
Sbjct: 435 KTFETLMWGYLEVKQPWKAEEVLQMM--RGCGVKPENSTFLLLAE--------------- 477
Query: 239 GFRMRGLVSEAARAHDTM 256
+R+ GL E+ +A + +
Sbjct: 478 AWRVAGLTDESNKAINAL 495
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 139/328 (42%), Gaps = 59/328 (17%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGG-EFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
GL P+ TY+++ I+A GG EF +V+ D+M NGV PD +T+N
Sbjct: 298 GLRPNLVTYNAV-------IDACGKGGMEFKQVAKFFDEMQRNGVQPD-------RITFN 343
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+L+ G E A + M + D SYN ++ C+ + A+E+ +M K
Sbjct: 344 SLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403
Query: 124 RILRMEEVV-YESLMQGLS----------------------DEDAYSSLMNDYLAQGDME 160
RI M VV Y +++ G + D +Y++L++ Y G E
Sbjct: 404 RI--MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
+A + RE+A G + VT + + G K+ + E K++ M L TY
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL--LTYST 519
Query: 221 LIENCSNNE-FKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK 279
LI+ S +K +E+ + F+ GL + D +Y+ LI C+
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGL----------------RADVVLYSALIDALCKNG 563
Query: 280 NVDKAYNMYTRMVHYGFVPHMFSVLALI 307
V A ++ M G P++ + ++I
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 112/266 (42%), Gaps = 38/266 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y +L++A C GG+ + QM ++P+ +V+Y+ +I G+ GR +EA
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPN-------VVSYSTVIDGFAKAGRFDEA 428
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L + M +G++ D VSYN ++S + ++ +A ++ EM I +
Sbjct: 429 LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK----------- 477
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
D Y++L+ Y QG ++ + E+ + L +T S I+G SK +EA
Sbjct: 478 ---DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
EI S + Y ALI+ N GLV A D M
Sbjct: 535 EIFREFKSAGLRADV--VLYSALIDALCKN---------------GLVGSAVSLIDEMTK 577
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKA 284
P+ YN +I R +D++
Sbjct: 578 EGISPNVVTYNSIIDAFGRSATMDRS 603
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 31/232 (13%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
VTYN ++ G+C + R +AL +L+ M E G++P+ +YN ++ GF R + A+E +E
Sbjct: 196 VTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE 255
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
M +KR ++ V Y +++ G G++++A + E+ +G L
Sbjct: 256 M-KKRDCEIDVVTYTTVVHGFG-------------VAGEIKRARNVFDEMIREGVLPSVA 301
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T + I L KK A + M+ + TTY+ LI +G
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRG--YEPNVTTYNVLI---------------RG 344
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G S M + +P+ YN +I + C V+KA ++ +M
Sbjct: 345 LFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 99/252 (39%), Gaps = 34/252 (13%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS T+ + Y G+ ++A+ + M E G D S+N ++ C+ + KAYEL
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
R LR V D Y+ ++N + KA + +E+ G
Sbjct: 184 ------FRALRGRFSV---------DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINP 228
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSC-LSKTTHTTYDALIENCSNNEFKSLVE 235
T + + G + + R A E L M C + T+TT
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT------------------ 270
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
+V GF + G + A D M+ P YN +I C+ NV+ A M+ MV G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 296 FVPHMFSVLALI 307
+ P++ + LI
Sbjct: 331 YEPNVTTYNVLI 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 58/238 (24%)
Query: 1 MLWRGLSPDEGTYSSLFNAYF----------------------------SLINAYCLGGE 32
M+ RG++P+ TY+++ +F ++++ + + GE
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ N+ D+MI GVL PS+ TYNA+I C VE A+ + M G P
Sbjct: 281 IKRARNVFDEMIREGVL-------PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ +YN++I G E + EL + RME E Q Y+ ++
Sbjct: 334 NVTTYNVLIRGLFHAGEFSRGEEL--------MQRMENEGCEPNFQ------TYNMMIRY 379
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE---------AKEIL 201
Y ++EKA L ++ L T ++ I+G+ + R+ + AKEIL
Sbjct: 380 YSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEIL 437
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 104/252 (41%), Gaps = 37/252 (14%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P++ TYN L+ C +V+ A +L M G PDAVSY VIS C + + EL
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
R E VV Y++L+N + D + A+ L RE+ G
Sbjct: 239 AE--------RFEPVV-----------SVYNALINGLCKEHDYKGAFELMREMVEKGISP 279
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
++ S IN L + A L M+ C + +L L
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQMLKRGC-----------------HPNIYTLSSL 322
Query: 237 VKGFRMRGLVSEAARAHDTMLHG-NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
VKG +RG +A + M+ G +P+ YN L+ C N+ KA ++++ M G
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 296 FVPHMFSVLALI 307
P++ + +LI
Sbjct: 383 CSPNIRTYGSLI 394
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 131/338 (38%), Gaps = 75/338 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M+ +G+SP+ +YS +LIN C G+ + QM+ G P+ T S
Sbjct: 272 MVEKGISPNVISYS-------TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324
Query: 57 -------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLS 91
P++V YN L+ G+C G + +A+ + M E+G S
Sbjct: 325 GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS 384
Query: 92 PDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMN 151
P+ +Y +I+GF + A + +M VVY ++++ L +
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP-NVVVYTNMVEALCRHSKF----- 438
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM-ISNSCL 210
++A L ++ + T + FI GL R A+++ M + C
Sbjct: 439 --------KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 211 SKTTHTTYDALIENCSN-NEFKSLVELVKGFRMRGLVSEAARAHDTMLHGN--------- 260
TY+ L++ + N + L + MRG V ++ ++T+LHG+
Sbjct: 491 PNI--VTYNELLDGLAKANRIEEAYGLTREIFMRG-VEWSSSTYNTLLHGSCNAGLPGIA 547
Query: 261 -----------HKPDGGVYNFLIVEHCRCKNVDKAYNM 287
PD N +I+ +C+ ++A M
Sbjct: 548 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 113/281 (40%), Gaps = 37/281 (13%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
+Y SL G + ++M+ GV P+ TYN +++G+ R+E
Sbjct: 220 IKSYNSLFKVILRRGRYMMAKRYFNKMVSEGV-------EPTRHTYNLMLWGFFLSLRLE 272
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL 136
AL M G+SPD ++N +I+GFCR ++ +A +L +EM +I VV
Sbjct: 273 TALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKI--GPSVV---- 326
Query: 137 MQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
+Y++++ YLA ++ + E+ G + T S + GL + E
Sbjct: 327 --------SYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVE 378
Query: 197 AKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTM 256
AK IL +M++ K L+ + + E++K + +EA
Sbjct: 379 AKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEA------- 431
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
G Y LI C+ ++A + ++ +
Sbjct: 432 ---------GHYGVLIENQCKASAYNRAIKLLDTLIEKEII 463
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 124/308 (40%), Gaps = 56/308 (18%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG+SPD+ T++ ++IN +C + + L +M N + PS+V
Sbjct: 281 MKTRGISPDDATFN-------TMINGFCRFKKMDEAEKLFVEMKGNKI-------GPSVV 326
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK--- 117
+Y +I GY + RV++ L I M G+ P+A +Y+ ++ G C + GK E K
Sbjct: 327 SYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLC---DAGKMVEAKNIL 383
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
M K I + ++ L+ S GDM A + + +A +E
Sbjct: 384 KNMMAKHIAPKDNSIFLKLLVSQS-------------KAGDMAAATEVLKAMATLNVPAE 430
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT------TYDALIENCSNNEFK 231
+ V I K + A ++L ++I + + T Y+ +IE NN
Sbjct: 431 AGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQT 490
Query: 232 SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+ E++ R L+ + D + N LI H + N D +Y + M
Sbjct: 491 AKAEVL----FRQLMKRGVQDQDAL------------NNLIRGHAKEGNPDSSYEILKIM 534
Query: 292 VHYGFVPH 299
G VP
Sbjct: 535 SRRG-VPR 541
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 117/288 (40%), Gaps = 39/288 (13%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
DE S Y +++ +C G+ + L M H S ++V+YN LI G
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN--------SVNIVSYNILIKG 368
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
G+++EA I R MP G + D +Y I I G C KA + E++
Sbjct: 369 LLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS----- 423
Query: 129 EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
G D AY+S+++ + +E+A L +E++ G S + I GL
Sbjct: 424 ---------GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474
Query: 189 SKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSE 248
+ +R EA L M N C + T +Y+ LI C G G E
Sbjct: 475 IRDSRLGEASFFLREMGKNGC--RPTVVSYNILI--C-------------GLCKAGKFGE 517
Query: 249 AARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
A+ ML KPD Y+ L+ CR + +D A ++ + + G
Sbjct: 518 ASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 114/290 (39%), Gaps = 40/290 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGV-LPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
AY S+I+ C + SNL +M +GV L V NALI G R+ E
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC--------NALIGGLIRDSRLGE 482
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
A LR M + G P VSYNI+I G C+ + G+A EM E
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-------------- 528
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
D YS L+ ++ A L + G ++ + ++ I+GL + +A
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
++ +M +C + TY+ L+E GF G + A M
Sbjct: 589 MTVMANMEHRNCTANLV--TYNTLME---------------GFFKVGDSNRATVIWGYMY 631
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+PD YN ++ C C+ V A + ++G P +++ L+
Sbjct: 632 KMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 120/302 (39%), Gaps = 54/302 (17%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G++P+ TY+ L I C EF K D M G PD + +Y+
Sbjct: 144 GVAPNLQTYNVL-------IKMSCKKKEFEKARGFLDWMWKEGFKPD-------VFSYST 189
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE-- 122
+I G++++AL + M E G++PD YNI+I GF + ++ A EL + E
Sbjct: 190 VINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249
Query: 123 ----------------KRILRMEEV--VYESLMQGLSDED--AYSSLMNDYLAQGDMEKA 162
+ R+++ ++E + Q ++D YSSL++ G+++KA
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
+ E+ + VT + + G + + +E+ E+ M + ++ ++
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNI----- 364
Query: 223 ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
L+KG G + EA M + D Y I C V+
Sbjct: 365 -------------LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411
Query: 283 KA 284
KA
Sbjct: 412 KA 413
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 23/138 (16%)
Query: 1 MLWRGLSPDEGTYSSLF---------NAYFSLINAYCLGGEFSKVSNLHDQMIHN----G 47
ML G PD TYS L + L + + G + V +H+ +IH G
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVM-MHNILIHGLCSVG 583
Query: 48 VLPDFVT---------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYN 98
L D +T + +LVTYN L+ G+ +G A I M +MGL PD +SYN
Sbjct: 584 KLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYN 643
Query: 99 IVISGFCRIREPGKAYEL 116
++ G C R A E
Sbjct: 644 TIMKGLCMCRGVSYAMEF 661
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 132/297 (44%), Gaps = 37/297 (12%)
Query: 9 DEG-TYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIY 67
DEG + +F Y + I+ Y GG +M+ G+ D +V+Y+ LI
Sbjct: 235 DEGFEFDCVF--YSNWIHGYFKGGALVDALMQDREMVEKGMNRD-------VVSYSILID 285
Query: 68 GYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILR 127
G G VEEALG+L M + G+ P+ ++Y +I G C++ + +A+ L RIL
Sbjct: 286 GLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLF-----NRILS 340
Query: 128 MEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFING 187
+ V DE Y +L++ +G++ +A+ + ++ G +T + ING
Sbjct: 341 VGIEV---------DEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391
Query: 188 LSKKARTREAKEILLSMISNSCLSKTTHTTY------DALIENCSNN-EFKSLVELV--- 237
L R EA E+ ++ + T +Y DA++E E K ++LV
Sbjct: 392 LCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCN 451
Query: 238 ---KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
K F + G EA + M + PD Y +I +C+ +++A M+ +
Sbjct: 452 ILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 132/306 (43%), Gaps = 44/306 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGV---LPDFVTGSP 57
++ R + G + S + SLI + GE + + M + V +FV
Sbjct: 119 LILRDCLRNHGAFPSSL-TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVC--- 174
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMG-LSPDAVSYNIVISGFCRIREPGKAYEL 116
+A+I G+C +G+ E ALG + G L P+ V+Y ++S C++ GK E+
Sbjct: 175 -----SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQL---GKVDEV 226
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+ + R+E+ +E D YS+ ++ Y G + A + DRE+ G
Sbjct: 227 R-----DLVRRLEDEGFEF------DCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNR 275
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+ V+ S+ I+GLSK+ EA +L MI + TY A+I
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV--EPNLITYTAII-------------- 319
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+G G + EA + +L + D +Y LI CR N+++A++M M G
Sbjct: 320 -RGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI 378
Query: 297 VPHMFS 302
P + +
Sbjct: 379 QPSILT 384
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 39/208 (18%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL P E TY L I+ C G F L D M+ G++P+ ++ YN+
Sbjct: 720 GLVPSEVTYGIL-------IDNLCKEGLFLDAEKLLDSMVSKGLVPN-------IIIYNS 765
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
++ GYC LG+ E+A+ ++ ++PDA + + +I G+C+ + +A + E +K
Sbjct: 766 IVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKN 825
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI-----------AHDG 173
I +D + L+ + +G ME+A L RE+ D
Sbjct: 826 I--------------SADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDA 871
Query: 174 YLSESVTESVFINGLSKKARTREAKEIL 201
L+ES + F+ L ++ R +A +IL
Sbjct: 872 ELAESESIRGFLVELCEQGRVPQAIKIL 899
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 112/266 (42%), Gaps = 50/266 (18%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +IN C G K NL GV + + +TYN+LI G C G + EAL
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGV-------TLNTITYNSLINGLCQQGCLVEAL 710
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL--- 136
+ + +GL P V+Y I+I C+ A +L M K ++ ++Y S+
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVP-NIIIYNSIVDG 769
Query: 137 -----------------MQGLSDEDAY--SSLMNDYLAQGDMEKAYIL-----DREIAHD 172
M G DA+ SS++ Y +GDME+A + D+ I+ D
Sbjct: 770 YCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Query: 173 --GYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEF 230
G+L I G K R EA+ +L M+ + + K + L E+ S F
Sbjct: 830 FFGFL-------FLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGF 882
Query: 231 KSLVELVKGFRMRGLVSEAARAHDTM 256
LVEL + +G V +A + D +
Sbjct: 883 --LVELCE----QGRVPQAIKILDEI 902
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 56/273 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG+ P TY+++ IN C+ G S+ + GV+ D +T S L
Sbjct: 373 MEQRGIQPSILTYNTV-------INGLCMAGRVSEADE-----VSKGVVGDVITYSTLLD 420
Query: 61 TY----------------------------NALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+Y N L+ + +G EA + R MPEM L+P
Sbjct: 421 SYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTP 480
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D +Y +I G+C+ + +A E+ E+ + + V Y ++ L + M D
Sbjct: 481 DTATYATMIKGYCKTGQIEEALEMFNELRKSSV--SAAVCYNRIIDALCKKG-----MLD 533
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
+ +E + ++ + D + S ++ S+ NG K L + S+ CL
Sbjct: 534 TATEVLIE---LWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYG--LEQLNSDVCLGM 588
Query: 213 TTHTTYDALIENCSNNEFKSLVELVKGFRMRGL 245
DA++ C F++ +E+ R +GL
Sbjct: 589 LN----DAILLLCKRGSFEAAIEVYMIMRRKGL 617
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 31/217 (14%)
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLM 150
S D + Y I+I+G C+ KA L + R + + + Y SL+ GL
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNL-CSFAKSRGVTLNTITYNSLINGLCQ-------- 702
Query: 151 NDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL 210
QG + +A L + + G + VT + I+ L K+ +A+++L SM+S +
Sbjct: 703 -----QGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLV 757
Query: 211 SKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNF 270
+ +I N +V G+ G +A R + G PD +
Sbjct: 758 P-------NIIIYN----------SIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSS 800
Query: 271 LIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+I +C+ ++++A +++T F L LI
Sbjct: 801 MIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLI 837
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 41/272 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML RGL P+ TY++L E + + D +I G F T +P
Sbjct: 307 MLSRGLKPNAVTYNTLIKGL----------SEAHRYDEIKDILI--GGNDAFTTFAPDAC 354
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N LI +C G ++ A+ + + M M L PD+ SY+++I C E +A L E+
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 121 DEKRIL--------------------------RMEEVVYESLMQ-GLSDEDAYSSLMNDY 153
EK +L + E V+ LM+ G+ D +Y +L+ +
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGH 474
Query: 154 LAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL--S 211
+G + AY L + ++ + T + I+GL K A + L M+ +S L +
Sbjct: 475 CREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVA 534
Query: 212 KTTHTTYDALIENCSNNEFKSLVELVKGFRMR 243
T H+ L + NE LV L+ R+R
Sbjct: 535 TTFHSVLAELAKRKFANESFCLVTLMLEKRIR 566
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 42/288 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHN-GVLPDFVTGSPSLVTYN 63
G+SP T++SL + G +L D+M GV PD T +N
Sbjct: 168 GISPSVLTFNSLLSILLK-------RGRTGMAHDLFDEMRRTYGVTPDSYT-------FN 213
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
LI G+C V+EA I + M +PD V+YN +I G CR + A+ + M +K
Sbjct: 214 TLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKK 273
Query: 124 RILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
VV +Y++L+ Y + ++++A ++ ++ G +VT +
Sbjct: 274 ATDVHPNVV------------SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNT 321
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMR 243
I GLS+ R E K+IL+ TT+ + C+ N L+K
Sbjct: 322 LIKGLSEAHRYDEIKDILIG-------GNDAFTTFAP--DACTFN------ILIKAHCDA 366
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G + A + ML+ PD Y+ LI C D+A ++ +
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 39/270 (14%)
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
+N+LI Y G +E++ + + M +MG+SP +++N ++S + G A++L D
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL---FD 197
Query: 122 EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYIL--DREIAHDGYLSESV 179
E R R V D +++L+N + +++A+ + D E+ H + V
Sbjct: 198 EMR--RTYGVT--------PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCN--PDVV 245
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVK 238
T + I+GL + + + A +L M+ + +Y L+ C E V +
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 239 GFRMRGL-------------VSEAAR---AHDTMLHGNH-----KPDGGVYNFLIVEHCR 277
RGL +SEA R D ++ GN PD +N LI HC
Sbjct: 306 DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCD 365
Query: 278 CKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
++D A ++ M++ P S LI
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLI 395
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 121/300 (40%), Gaps = 47/300 (15%)
Query: 7 SPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALI 66
+PD TY+++ I+ C G KV H+ + +G+L P++V+Y L+
Sbjct: 241 NPDVVTYNTI-------IDGLCRAG---KVKIAHN--VLSGMLKKATDVHPNVVSYTTLV 288
Query: 67 YGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRIL 126
GYC ++EA+ + M GL P+AV+YN +I G + E + E+ K IL
Sbjct: 289 RGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG---LSEAHRYDEI------KDIL 339
Query: 127 RMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFIN 186
+ + D ++ L+ + G ++ A + +E+ + +S + SV I
Sbjct: 340 IGGNDAFTTFA---PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIR 396
Query: 187 GLSKKARTREAKEILLSMISNSCL-----SKTTHTTYDALIEN-CSNNEFKSLVELVKGF 240
L + A+ + + L K Y+ + E C+N + K ++ +
Sbjct: 397 TLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQL 456
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
RG+ D Y LI HCR AY + M+ FVP +
Sbjct: 457 MKRGV-----------------QDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDL 499
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 38/266 (14%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P++VT+ LI G+C G ++ A + + M + G+ PD ++Y+ +I G+ + G ++
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
L ++L +G+ D +SS ++ Y+ GD+ A ++ + + G
Sbjct: 343 L---------------FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE---NCSNNE-- 229
VT ++ I GL + R EA + ++ + + TY +LI+ C N
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG--MEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 230 ---FKSLVE------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVE 274
++ +++ LV G +GL+ A R ML + + + V+N LI
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 275 HCRCKNVDKAYNMYTRMVHYGFVPHM 300
CR D+A ++ M YG P +
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDV 531
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 124/310 (40%), Gaps = 51/310 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG+ PD YS+L + YF G L Q +H GV D +V
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFK-------AGMLGMGHKLFSQALHKGVKLD-------VV 357
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+++ I Y G + A + + M G+SP+ V+Y I+I G C + G+ YE
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC---QDGRIYEAFGMY 414
Query: 121 DE--KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+ KR + V Y SL+ G + G++ + L ++ GY +
Sbjct: 415 GQILKRGMEPSIVTYSSLIDG-------------FCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELV 237
V V ++GLSK+ A + M+ S + +++LI+ C N F E +
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI--RLNVVVFNSLIDGWCRLNRFD---EAL 516
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
K FR+ G+ KPD + ++ +++A ++ RM G
Sbjct: 517 KVFRLMGIY-------------GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 298 PHMFSVLALI 307
P + LI
Sbjct: 564 PDALAYCTLI 573
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 105/292 (35%), Gaps = 66/292 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS---- 56
M GL PD AY +LI+A+C + + L D M N + D +
Sbjct: 557 MFKMGLEPDA-------LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 57 ------------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
P +VTYN +I GYC L R++EA I + P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
+ V+ I+I C+ + A + M EK + Y LM+
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEK--------------GSKPNAVTYGCLMDW 715
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
+ D+E ++ L E+ G V+ S+ I+GL K+ R EA I I L
Sbjct: 716 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Query: 213 TTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPD 264
L++G+ G + EAA ++ ML KPD
Sbjct: 776 VVAYAI-----------------LIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 126/318 (39%), Gaps = 50/318 (15%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
SLI+ +C F + + M G+ PD + T+ ++ GR+EEAL +
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPD-------VATFTTVMRVSIMEGRLEEALFL 553
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRIL--------------- 126
M +MGL PDA++Y +I FC+ +P +L M +I
Sbjct: 554 FFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 127 --RMEEV--VYESLMQGLSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
R+E+ + +L++G + D Y++++ Y + +++A + + + +VT
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN-----EFKSLVE 235
++ I+ L K A + M SK TY L++ S + FK E
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKG--SKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731
Query: 236 ---------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
++ G RG V EA + PD Y LI +C+
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 791
Query: 281 VDKAYNMYTRMVHYGFVP 298
+ +A +Y M+ G P
Sbjct: 792 LVEAALLYEHMLRNGVKP 809
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 38/266 (14%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P++VT+ LI G+C G ++ A + + M + G+ PD ++Y+ +I G+ + G ++
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
L ++L +G+ D +SS ++ Y+ GD+ A ++ + + G
Sbjct: 343 L---------------FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE---NCSNNE-- 229
VT ++ I GL + R EA + ++ + + TY +LI+ C N
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG--MEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 230 ---FKSLVE------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVE 274
++ +++ LV G +GL+ A R ML + + + V+N LI
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 275 HCRCKNVDKAYNMYTRMVHYGFVPHM 300
CR D+A ++ M YG P +
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDV 531
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 144/362 (39%), Gaps = 79/362 (21%)
Query: 1 MLWRGLSPDEGTYSSLFNAYF----------------------------SLINAYCLGGE 32
M RG+ PD YS+L + YF S I+ Y G+
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ S ++ +M+ G+ SP++VTY LI G C GR+ EA G+ + + G+ P
Sbjct: 372 LATASVVYKRMLCQGI-------SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 93 DAVSYNIVISGFCR---IREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSL 149
V+Y+ +I GFC+ +R YE ++M + V+Y L+ GLS
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP----DVVIYGVLVDGLS-------- 472
Query: 150 MNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM-ISNS 208
QG M A ++ V + I+G + R EA ++ M I
Sbjct: 473 -----KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 209 CLSKTTHTTY-------DALIENCSNNEFKSLVELVKGFRMRGLVS-------------- 247
T TT DA ++ L +L++ ++ ++
Sbjct: 528 KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 587
Query: 248 --EAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLA 305
+A++ + ++ G +PD YN +I +C + +D+A ++ + F P+ ++
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 306 LI 307
LI
Sbjct: 648 LI 649
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 31/208 (14%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P +VTYN +I GYC L R++EA I + P+ V+ I+I C+ + A +
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
M EK + Y LM+ + D+E ++ L E+ G
Sbjct: 665 FSIMAEK--------------GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
V+ S+ I+GL K+ R EA I H DA + + + L
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIF-------------HQAIDAKLL----PDVVAYAIL 753
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPD 264
++G+ G + EAA ++ ML KPD
Sbjct: 754 IRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 140/373 (37%), Gaps = 84/373 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFV------- 53
+L RG+ P TYSSL I+ +C G L++ MI G PD V
Sbjct: 417 ILKRGMEPSIVTYSSL-------IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 54 ---------------------TGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ ++V +N+LI G+C L R +EAL + R M G+ P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 93 DAVSYNIVI------SGFCRIREPGKAYELKMEMDEKRIL-----------------RME 129
D ++ V+ FC+ +P +L M +I R+E
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 130 EV--VYESLMQGLSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFI 185
+ + +L++G + D Y++++ Y + +++A + + + +VT ++ I
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 186 NGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN-----EFKSLVE----- 235
+ L K A + M SK TY L++ S + FK E
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKG--SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 707
Query: 236 ----------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAY 285
++ G RG V EA + PD Y LI +C+ + +A
Sbjct: 708 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 767
Query: 286 NMYTRMVHYGFVP 298
+Y M+ G P
Sbjct: 768 LLYEHMLRNGVKP 780
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 129/308 (41%), Gaps = 52/308 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
I YC G F K L M H G+ PD +V + I C G ++EA +L
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPD-------IVAFTVFIDKLCKAGFLKEATSVL 329
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
+ G+S D+VS + VI GFC++ +P +A +L R+ ++
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS------FRLRPNIF--------- 374
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
YSS +++ + GDM +A + +EI G L + V + I+G RT +A +
Sbjct: 375 --VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFR---MRGLVSEAARAHDTMLHG 259
+++ + + + TT LI CS F S+ + FR GL + ++ ++HG
Sbjct: 433 ALLKSG--NPPSLTTSTILIGACS--RFGSISDAESVFRNMKTEGLKLDVV-TYNNLMHG 487
Query: 260 NHK--------------------PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
K PD YN LI +D+A + + ++ GFVP
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 300 MFSVLALI 307
+ +I
Sbjct: 548 TLAFTDVI 555
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL PD Y+++ I+ YC G K ++ +G PSL T
Sbjct: 403 GLLPDCVCYTTM-------IDGYCNLGRTDKAFQYFGALLKSG-------NPPSLTTSTI 448
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI G + +A + R M GL D V+YN ++ G+ + + K +EL +DE R
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL---IDEMR 505
Query: 125 ILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
G+S D Y+ L++ + +G +++A + E+ G++ ++ +
Sbjct: 506 ------------SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTD 553
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMR 243
I G SK+ +EA + M + CS L+ G+
Sbjct: 554 VIGGFSKRGDFQEAFILWFYM---------ADLRMKPDVVTCS--------ALLHGYCKA 596
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ +A + +L KPD +YN LI +C +++KA + MV G +P+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 36/164 (21%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLP------DFVTG--- 55
G+SPD TY+ L I++ + G + + + ++I G +P D + G
Sbjct: 508 GISPDVATYNIL-------IHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSK 560
Query: 56 -------------------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
P +VT +AL++GYC R+E+A+ + + + GL PD V
Sbjct: 561 RGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVL 620
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL 140
YN +I G+C + + KA EL M ++ +L E + +L+ GL
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLP-NESTHHALVLGL 663
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL D TY++L + Y + +KV L D+M G+ SP + TYN
Sbjct: 473 GLKLDVVTYNNLMHGYGK-------THQLNKVFELIDEMRSAGI-------SPDVATYNI 518
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI+ G ++EA I+ + G P +++ VI GF + + +A+ L M + R
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 125 I-----------------LRMEE--VVYESLMQGLSDEDA--YSSLMNDYLAQGDMEKAY 163
+ RME+ V++ L+ D Y++L++ Y + GD+EKA
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKK 191
L + G L T + GL K
Sbjct: 639 ELIGLMVQRGMLPNESTHHALVLGLEGK 666
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 129/308 (41%), Gaps = 52/308 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
I YC G F K L M H G+ PD +V + I C G ++EA +L
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPD-------IVAFTVFIDKLCKAGFLKEATSVL 329
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
+ G+S D+VS + VI GFC++ +P +A +L R+ ++
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS------FRLRPNIF--------- 374
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
YSS +++ + GDM +A + +EI G L + V + I+G RT +A +
Sbjct: 375 --VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFR---MRGLVSEAARAHDTMLHG 259
+++ + + + TT LI CS F S+ + FR GL + ++ ++HG
Sbjct: 433 ALLKSG--NPPSLTTSTILIGACS--RFGSISDAESVFRNMKTEGLKLDVV-TYNNLMHG 487
Query: 260 NHK--------------------PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
K PD YN LI +D+A + + ++ GFVP
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 300 MFSVLALI 307
+ +I
Sbjct: 548 TLAFTDVI 555
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL PD Y+++ I+ YC G K ++ +G PSL T
Sbjct: 403 GLLPDCVCYTTM-------IDGYCNLGRTDKAFQYFGALLKSG-------NPPSLTTSTI 448
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI G + +A + R M GL D V+YN ++ G+ + + K +EL +DE R
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL---IDEMR 505
Query: 125 ILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
G+S D Y+ L++ + +G +++A + E+ G++ ++ +
Sbjct: 506 ------------SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTD 553
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMR 243
I G SK+ +EA + M + CS L+ G+
Sbjct: 554 VIGGFSKRGDFQEAFILWFYM---------ADLRMKPDVVTCS--------ALLHGYCKA 596
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ +A + +L KPD +YN LI +C +++KA + MV G +P+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 36/164 (21%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLP------DFVTG--- 55
G+SPD TY+ L I++ + G + + + ++I G +P D + G
Sbjct: 508 GISPDVATYNIL-------IHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSK 560
Query: 56 -------------------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVS 96
P +VT +AL++GYC R+E+A+ + + + GL PD V
Sbjct: 561 RGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVL 620
Query: 97 YNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL 140
YN +I G+C + + KA EL M ++ +L E + +L+ GL
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLP-NESTHHALVLGL 663
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL D TY++L + Y + +KV L D+M G+ SP + TYN
Sbjct: 473 GLKLDVVTYNNLMHGYGK-------THQLNKVFELIDEMRSAGI-------SPDVATYNI 518
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI+ G ++EA I+ + G P +++ VI GF + + +A+ L M + R
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 125 I-----------------LRMEE--VVYESLMQGLSDEDA--YSSLMNDYLAQGDMEKAY 163
+ RME+ V++ L+ D Y++L++ Y + GD+EKA
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKK 191
L + G L T + GL K
Sbjct: 639 ELIGLMVQRGMLPNESTHHALVLGLEGK 666
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 44/293 (15%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
+ Y +++ +F +++ L D+M+ +G P+ VTYN LI+ Y ++E
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVRDGC-------KPNTVTYNRLIHSYGRANYLKE 412
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
A+ + M E G PD V+Y +I I ++ M+M + RM+E
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLID----IHAKAGFLDIAMDMYQ----RMQEA------ 458
Query: 138 QGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
GLS D YS ++N G + A+ L E+ G VT ++ I L KAR E
Sbjct: 459 -GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI-ALHAKARNYE 516
Query: 197 AKEILLSMISNSCLS--KTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
L + N+ K T++ ++ +C G + EA
Sbjct: 517 TALKLYRDMQNAGFQPDKVTYSIVMEVLGHC------------------GFLEEAEGVFA 558
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
M N PD VY L+ + NVDKA+ Y M+ G P++ + +L+
Sbjct: 559 EMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLG--GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
GLSPD TYS + N CLG G L +M+ G +P+LVT+
Sbjct: 459 GLSPDTFTYSVIIN---------CLGKAGHLPAAHRLFCEMVGQGC-------TPNLVTF 502
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVIS--GFCRIREPGKAYELKMEM 120
N +I + E AL + R M G PD V+Y+IV+ G C E +A + EM
Sbjct: 503 NIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLE--EAEGVFAEM 560
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K + DE Y L++ + G+++KA+ + + G T
Sbjct: 561 QRK--------------NWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPT 606
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSN 227
+ ++ + R EA +L SM++ + TY L+ C++
Sbjct: 607 CNSLLSTFLRVHRMSEAYNLLQSMLALGL--HPSLQTYTLLLSCCTD 651
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 129/311 (41%), Gaps = 51/311 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
++ +GL+P+ TYS L A AY G V L D++I G G P+LV
Sbjct: 202 LMQKGLAPNAFTYSFLLEA------AYKERGTDEAV-KLLDEIIVKG-------GEPNLV 247
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+YN L+ G+C GR ++A+ + R +P G + VSYNI++ C +A L EM
Sbjct: 248 SYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM 307
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDG--YLSES 178
D R VV Y+ L+N G E+A + +E++ + +
Sbjct: 308 DGGD--RAPSVV------------TYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTA 353
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
+ + I L K+ + + L MI C K TY+A+ C +N ++ +
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRC--KPNEGTYNAIGSLCEHNS-----KVQE 406
Query: 239 GFRMRGLVSEAAR--AHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
F + +S + HD Y +I CR N A+ + M GF
Sbjct: 407 AFYIIQSLSNKQKCCTHD------------FYKSVITSLCRKGNTFAAFQLLYEMTRCGF 454
Query: 297 VPHMFSVLALI 307
P + ALI
Sbjct: 455 DPDAHTYSALI 465
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 39/174 (22%)
Query: 1 MLWRGLSPDEGTYSSL----------------------------FNAYFSLINAYCLGGE 32
M++R P+EGTY+++ + Y S+I + C G
Sbjct: 379 MIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGN 438
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEM-GLS 91
L +M G PD TY+ALI G C G A+ +L M E
Sbjct: 439 TFAAFQLLYEMTRCGFDPD-------AHTYSALIRGLCLEGMFTGAMEVLSIMEESENCK 491
Query: 92 PDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM-EEVVYESLMQGLSDED 144
P ++N +I G C+IR A E+ M EK+ RM E Y L++G++ ED
Sbjct: 492 PTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKK--RMPNETTYAILVEGIAHED 543
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 120/309 (38%), Gaps = 54/309 (17%)
Query: 38 NLHDQMIHNGVLPDFVTG--SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
NL D H L VTG P++ L+Y C R+++A+ ++ M G+ PDA
Sbjct: 86 NLSDSFSH---LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDAS 142
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL--------------- 140
+Y +++ C+ G A +L +M E V Y +L++GL
Sbjct: 143 AYTYLVNQLCKRGNVGYAMQLVEKM-EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVER 201
Query: 141 -------SDEDAYSSLMN-DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKA 192
+ YS L+ Y +G E +LD EI G V+ +V + G K+
Sbjct: 202 LMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLD-EIIVKGGEPNLVSYNVLLTGFCKEG 260
Query: 193 RTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKS----LVELVKGFRMRGLVS 247
RT +A + + + K +Y+ L+ C + ++ L E+ G R +V+
Sbjct: 261 RTDDAMALFRELPAKG--FKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVT 318
Query: 248 ---------------EAARAHDTMLHGNH--KPDGGVYNFLIVEHCRCKNVDKAYNMYTR 290
+A + M GNH + YN +I C+ VD
Sbjct: 319 YNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDE 378
Query: 291 MVHYGFVPH 299
M++ P+
Sbjct: 379 MIYRRCKPN 387
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 149/392 (38%), Gaps = 103/392 (26%)
Query: 1 MLWR--------GLSPDEGTYSSLFN----------------------------AYFSLI 24
M W+ GL PDE TY+S+ AY ++I
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 25 NAYCLGGEFSKVSNLHDQMIHNGVLPDFVT---------------------------GSP 57
Y G+F + +L ++ G +P + +P
Sbjct: 316 MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP 375
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
+L TYN LI C G+++ A + M + GL P+ + NI++ C+ ++ +A +
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
EMD K + +E+ + SL+ GL G ++ AY + ++ +
Sbjct: 436 EEMDYK-VCTPDEITFCSLIDGLG-------------KVGRVDDAYKVYEKMLDSDCRTN 481
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLS--KTTHTTYDALIENCSNNEFKSLVE 235
S+ + I R + +I MI+ +C + +T D + + + +++ E
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKP--------------------DGGVYNFLIVEH 275
+K R V + AR++ ++HG K D YN +I
Sbjct: 542 EIKA---RRFVPD-ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 276 CRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
C+C V+KAY + M GF P + + ++I
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 106/293 (36%), Gaps = 45/293 (15%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P +Y+ LI+G G E + M E G D +YNIVI GFC+ + KAY+L
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDED----------------------AYSSLMNDYL 154
EM K V Y S++ GL+ D YSSL++ +
Sbjct: 610 LEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 155 AQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTT 214
G +++AY++ E+ G T + ++ L K EA SM C
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP--N 726
Query: 215 HTTYDALIEN-CSNNEFK-------------------SLVELVKGFRMRGLVSEAARAHD 254
TY LI C +F S ++ G G ++EA D
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD YN +I A++++ G H + + L+
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 130/319 (40%), Gaps = 52/319 (16%)
Query: 13 YSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFL 72
+ F+AY +LI A+ + L QM G P++ + LI G+
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY-------EPTVHLFTTLIRGFAKE 216
Query: 73 GRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVV 132
GRV+ AL +L M L D V YN+ I F ++ + A++ E+ E L+ +EV
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI-EANGLKPDEVT 275
Query: 133 YESLMQGLSDED----------------------AYSSLMNDYLAQGDMEKAY-ILDREI 169
Y S++ L + AY++++ Y + G ++AY +L+R+
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNN 228
A G + + + + L K + EA ++ M ++ +TY+ LI+ C
Sbjct: 336 AK-GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA---PNLSTYNILIDMLCRAG 391
Query: 229 EFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
+ + EL D+M P+ N ++ C+ + +D+A M+
Sbjct: 392 KLDTAFEL----------------RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 289 TRMVHYGFVPHMFSVLALI 307
M + P + +LI
Sbjct: 436 EEMDYKVCTPDEITFCSLI 454
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y SLI+ + G + + ++++ G+ +P+L T+N+L+ + EAL
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGL-------TPNLYTWNSLLDALVKAEEINEAL 712
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M E+ +P+ V+Y I+I+G C++R+ KA+ EM +K+ ++ + Y +++ G
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM-QKQGMKPSTISYTTMISG 771
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
L+ G++ +A L +G + +S + I GLS R +A
Sbjct: 772 LA-------------KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 45/256 (17%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT-GSP-------------------- 57
AY +I+ +C G+ +K L ++M G P VT GS
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 58 -------SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
++V Y++LI G+ +GR++EA IL + + GL+P+ ++N ++ + E
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 111 GKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIA 170
+A M E + +V Y L+ GL ++ KA++ +E+
Sbjct: 709 NEALVCFQSMKELKCTP-NQVTYGILINGLCKVRKFN-------------KAFVFWQEMQ 754
Query: 171 HDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSN-NE 229
G +++ + I+GL+K EA + +N + + Y+A+IE SN N
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS--ACYNAMIEGLSNGNR 812
Query: 230 FKSLVELVKGFRMRGL 245
L + R RGL
Sbjct: 813 AMDAFSLFEETRRRGL 828
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 128/299 (42%), Gaps = 42/299 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
+ S I+AYC + + ++ + + G P++ YN ++ GY G +++AL
Sbjct: 160 FRSAIDAYC------RARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKAL 213
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M + PD ++NI+I+G+CR + A +L EM EK VV
Sbjct: 214 RFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGC--EPNVV------- 264
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
++++L+ +L+ G +E+ + E+ G T + ++GL ++ R +A
Sbjct: 265 -----SFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACG 319
Query: 200 ILLSMISNSCLSKTTHTTYDALIEN-CSNNE-------------------FKSLVELVKG 239
++L +++ L + Y +L+E C N+ F + LV+G
Sbjct: 320 LVLDLLNKRVLP--SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEG 377
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
R G +A+ + M++ PD +N L+ + C + A + G+ P
Sbjct: 378 LRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEP 436
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 114/295 (38%), Gaps = 52/295 (17%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +++N Y G+ K + +M PD + T+N LI GYC + + AL
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPD-------VCTFNILINGYCRSSKFDLAL 248
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ R M E G P+ VS+N +I GF + + ++ EM E R E E L+ G
Sbjct: 249 DLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGC-RFSEATCEILVDG 307
Query: 140 LSDE----DA------------------YSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
L E DA Y SL+ + +A + E+ G
Sbjct: 308 LCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPC 367
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSN------NEF 230
+ + + GL K RT +A + M++ L + T++ L+ + CS+ N
Sbjct: 368 FIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDS--VTFNLLLRDLCSSDHSTDANRL 425
Query: 231 KSLVE-------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
+ L LV GF G E + ML + PD YN L+
Sbjct: 426 RLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 146/339 (43%), Gaps = 76/339 (22%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G+ +E TY +L ++AY G + L D+M G++ + V
Sbjct: 317 MVKSGVDCNERTYGAL-------VDAYGRAGSSDEALRLCDEMTSKGLVVN-------TV 362
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YN+++Y G +E A+ +LR M + D + IV+ G CR +A E + ++
Sbjct: 363 IYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQI 422
Query: 121 DEKRILR--------------------MEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDM 159
EK+++ ++++ L+QGLS D ++ +L++ YL +G +
Sbjct: 423 SEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKL 482
Query: 160 EKAYILDREIAHDGYLSESVTESVFI-----NGLSKKARTREAKEILLSMISNSCLSKTT 214
E+A EI +DG + + T ++ I NGLSK+ A+ ++ +M +
Sbjct: 483 ERAL----EI-YDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV---- 533
Query: 215 HTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGG------VY 268
TY+ L+ N K+ G V EA D +L K DG +
Sbjct: 534 --TYNTLL----NESLKT-----------GNVEEA----DDILSKMQKQDGEKSVSLVTF 572
Query: 269 NFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
N +I C+ + +KA + MV G VP + LI
Sbjct: 573 NIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLI 611
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
+++ LI GY G++E AL I GM +M + + V YN +++G + G A +
Sbjct: 467 ISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNA 526
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKA-YILDREIAHDGYLSES 178
M+ K I+ Y++L+N+ L G++E+A IL + DG S S
Sbjct: 527 MEIKDIV------------------TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVS 568
Query: 179 -VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFK-SLVEL 236
VT ++ IN L K +AKE+L M+ + + TY LI + S + + +VEL
Sbjct: 569 LVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDS--ITYGTLITSFSKHRSQEKVVEL 626
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 28/223 (12%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL--KM 118
T+N +IY +C ++ EAL + M + G+ P+ VS+N++I G C+ + A +L KM
Sbjct: 220 TFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKM 279
Query: 119 EMDEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYLAQ 156
M + V Y S++ G +E Y +L++ Y
Sbjct: 280 GMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRA 339
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
G ++A L E+ G + +V + + L + A +L M NS +
Sbjct: 340 GSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM--NSKNMQIDRF 397
Query: 217 TYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
T ++ C N K VE + + LV + H+T++H
Sbjct: 398 TQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIV-CHNTLMH 439
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 14/226 (6%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
SP+ VTYN++I G+C GR++ A I M + G+ + +Y ++ + R +A
Sbjct: 288 SPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALR 347
Query: 116 LKMEMDEKRILRMEEVVYESLMQGL----SDEDAYSSL--MNDYLAQGDMEKAYILDREI 169
L EM K ++ + V+Y S++ L E A S L MN Q D I+ R +
Sbjct: 348 LCDEMTSKGLV-VNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL 406
Query: 170 AHDGYLSESVTESVFINGLSKKARTREA---KEILLSMISNSCLSKTTHTTYDALIENCS 226
+GY+ E+V F +S+K + ++ + + L+ L++ S
Sbjct: 407 CRNGYVKEAVE---FQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLS 463
Query: 227 NNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
+ S L+ G+ G + A +D M+ N + +YN ++
Sbjct: 464 LDAI-SFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIV 508
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
S SLVT+N +I C G E+A +L+ M E G+ PD+++Y +I+ F + R K E
Sbjct: 566 SVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVE 625
Query: 116 L 116
L
Sbjct: 626 L 626
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 133/333 (39%), Gaps = 68/333 (20%)
Query: 4 RGLSPDEGTYSSLFNAY-----FS-----------------------LINAYCLGGEFSK 35
+G+ P+ TY+++ NAY FS L+ G+ S
Sbjct: 253 KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD 312
Query: 36 VSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
L D+M G+ D + Y +LI C G ++ A + + E GLSP +
Sbjct: 313 AEKLFDEMRERGIESD-------VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLA 155
+Y +I G C++ E G A L EM K + + +VV+ +L+ G Y
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGV-NITQVVFNTLIDG-------------YCR 411
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSC-LSKTT 214
+G +++A ++ + G+ ++ T + + ++ R EAK+ L M+ LS +
Sbjct: 412 KGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVS 471
Query: 215 HTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVE 274
+T L+ + G V EA R M +P+ YN +I
Sbjct: 472 YTN------------------LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
Query: 275 HCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+C+ + +A + M G P ++ +LI
Sbjct: 514 YCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSP--------------------- 57
+ +LI+ YC G + S ++D M G D T +
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 58 -------SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREP 110
S V+Y LI YC G VEEA + M G+ P+A++YN++I +C+ +
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 111 GKAYELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREI 169
+A +L+ M+ G+ D Y+SL++ ++++A L E+
Sbjct: 521 KEARKLRANMEA---------------NGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM 565
Query: 170 AHDGYLSESVTESVFINGLSKKARTREA 197
G SVT +V I+GLSK ++ EA
Sbjct: 566 GLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 21/156 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y +LI+ YC G + L +M GV P+ +TYN +IY YC G+++EA
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGV-------QPNAITYNVMIYAYCKQGKIKEA 523
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ M G+ PD+ +Y +I G C +A L EM K L V Y ++
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG-LDQNSVTYTVMIS 582
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
GLS G ++A+ L E+ GY
Sbjct: 583 GLS-------------KAGKSDEAFGLYDEMKRKGY 605
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 38/264 (14%)
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIRE--------------- 109
++ G C G VE++ +++ G+ P+A +YN +I+ + + R+
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 110 ---PGKAYELKMEMDEK--RILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAY 163
Y L ME+ K ++ E++ E +G+ SD Y+SL++ +G+M++A+
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
+L E+ G S T I+G+ K A EIL++ + + ++ T ++ LI+
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEM-GAAEILMNEMQSKGVN-ITQVVFNTLID 407
Query: 224 NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDK 283
G+ +G+V EA+ +D M + D N + R K D+
Sbjct: 408 ---------------GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDE 452
Query: 284 AYNMYTRMVHYGFVPHMFSVLALI 307
A RM+ G S LI
Sbjct: 453 AKQWLFRMMEGGVKLSTVSYTNLI 476
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 47/307 (15%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RGL G + L N +N+ C + L I GVLPD ++TYN
Sbjct: 3 RGLMKFPGISTKLLNIS---VNSLCKFRNLERAETLLIDGIRLGVLPD-------VITYN 52
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
LI GY ++EA + R M E G+ PD +YN +ISG + +
Sbjct: 53 TLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAK------------NLMLN 100
Query: 124 RILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESVTE 181
R+L++ + E L GLS D +Y++LM+ Y G +A+ IL +I G + T
Sbjct: 101 RVLQLFD---EMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTY 157
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGF 240
++ ++ L K T A E+ + S K TY+ LI C + S+ +++
Sbjct: 158 NILLDALCKSGHTDNAIELFKHLKSR---VKPELMTYNILINGLCKSRRVGSVDWMMREL 214
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ G + P+ Y ++ + + K ++K ++ +M G+
Sbjct: 215 KKSG----------------YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 301 FSVLALI 307
F+ A++
Sbjct: 259 FANCAVV 265
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 55/237 (23%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVT------ 54
ML GLSPD +Y++L + YF L GE K+ LH+ + G++P T
Sbjct: 109 MLHSGLSPDMWSYNTLMSCYFKLGRH----GEAFKI--LHEDIHLAGLVPGIDTYNILLD 162
Query: 55 ---------------------GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPD 93
P L+TYN LI G C RV ++R + + G +P+
Sbjct: 163 ALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPN 222
Query: 94 AVSYNIVISGFCRIREPGKAYELKMEMDEK-----------------RILRMEEV---VY 133
AV+Y ++ + + + K +L ++M ++ + R EE ++
Sbjct: 223 AVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMH 282
Query: 134 ESLMQGLSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
E + G +D +Y++L+N Y G+++ L EI G + T ++ +NGL
Sbjct: 283 ELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGL 339
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 125/304 (41%), Gaps = 47/304 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL PDE + L ++A C G + S + + M P P+L + +
Sbjct: 197 GLEPDEYVFGCL-------LDALCKNGSVKEASKVFEDMREK--FP------PNLRYFTS 241
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+YG+C G++ EA +L M E GL PD V + ++SG+ + AY+L +M KR
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDM-RKR 300
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
Y L+Q L + M++A + E+ G ++ VT +
Sbjct: 301 GFEPNVNCYTVLIQALCR------------TEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTY-DALIENCSNNEFKSLVELVKGFRMR 243
I+G K + +L M + + TY ++ + +F+ +EL++ + R
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMP--SQVTYMQIMVAHEKKEQFEECLELIEKMKRR 406
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSV 303
G PD +YN +I C+ V +A ++ M G P + +
Sbjct: 407 GC----------------HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTF 450
Query: 304 LALI 307
+ +I
Sbjct: 451 VIMI 454
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 38/243 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL PD + +L++ Y G+ + +L + M G P++ Y
Sbjct: 266 GLEPD-------IVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF-------EPNVNCYTV 311
Query: 65 LIYGYCFL-GRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
LI C R++EA+ + M G D V+Y +ISGFC+ K Y + +M +K
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371
Query: 124 RILRMEEVVYESLMQGLSDEDAYSSLMN------------DYL----------AQGDMEK 161
++ +V Y +M ++ + + D L G++++
Sbjct: 372 GVMP-SQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKE 430
Query: 162 AYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDAL 221
A L E+ +G T + ING + + EA M+S S + T +L
Sbjct: 431 AVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSL 490
Query: 222 IEN 224
+ N
Sbjct: 491 LNN 493
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 128/317 (40%), Gaps = 52/317 (16%)
Query: 5 GLSPDEGTYSSLFNAYFS---LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTG------ 55
G PD TY+ L +AY + + L E S + + HN V+ V
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 56 -------------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVIS 102
SP+ TY LI G GR+ EA + GM + G P+ YNI+I+
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 103 GFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKA 162
GF + E A L + +V E + L YS L++ G +++
Sbjct: 935 GFGKAGEADAACAL-----------FKRMVKEGVRPDLK---TYSVLVDCLCMVGRVDEG 980
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
+E+ G + V ++ INGL K R EA + M ++ ++ + TY++LI
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY-TYNSLI 1039
Query: 223 ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVD 282
N + G+V EA + ++ + +P+ +N LI + +
Sbjct: 1040 LN---------------LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084
Query: 283 KAYNMYTRMVHYGFVPH 299
AY +Y MV GF P+
Sbjct: 1085 HAYAVYQTMVTGGFSPN 1101
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 109/284 (38%), Gaps = 38/284 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +L++ + + V +M +G +PD +VT+ L+ C G EA
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPD-------VVTFTILVDALCKAGNFGEA 382
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L M + G+ P+ +YN +I G R+ A EL M+ L ++ Y
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES---LGVKPTAY----- 434
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
Y ++ Y GD A ++ G V + + L+K R REAK
Sbjct: 435 ------TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+I + K D++ N ++K + G + EA + M+
Sbjct: 489 QIFYGL-------KDIGLVPDSVTYNM----------MMKCYSKVGEIDEAIKLLSEMME 531
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+PD V N LI + VD+A+ M+ RM P + +
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y I+ Y G+ ++M G+ +P++V NA +Y GR EA
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGI-------APNIVACNASLYSLAKAGRDREA 487
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
I G+ ++GL PD+V+YN+++ + ++ E +A +L EM E + +V SL+
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC-EPDVIVVNSLIN 546
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
L D ++ +M+ + VT + + GL K + +EA
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTV-------------VTYNTLLAGLGKNGKIQEAI 593
Query: 199 EILLSMISNSCLSKTT--HTTYDALIENCSNNEFKSLVELVKGFRM 242
E+ M+ C T +T +D L C N+E ++++ F+M
Sbjct: 594 ELFEGMVQKGCPPNTITFNTLFDCL---CKNDEVTLALKML--FKM 634
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 23/187 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PSL TY++L+ G ++ +G+L+ M +GL P+ ++ I I R + +AYE+
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 117 KMEMDEK-------------------RILRMEEVVYESLMQGLSDED--AYSSLMNDYLA 155
MD++ R L + V+E + G D Y +L++ +
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTH 215
D++ E+ DG++ + VT ++ ++ L K EA + L M L
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL-- 398
Query: 216 TTYDALI 222
TY+ LI
Sbjct: 399 HTYNTLI 405
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 42/226 (18%)
Query: 87 EMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ-----GLS 141
++G+ P +YN++I G +E D M E+ + +Q +
Sbjct: 778 DLGVQPKLPTYNLLIGGL-------------LEAD------MIEIAQDVFLQVKSTGCIP 818
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
D Y+ L++ Y G +++ + L +E++ + ++T ++ I+GL K +A ++
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
++S+ S T TY LI+ G G + EA + + ML
Sbjct: 879 YDLMSDRDFSPTA-CTYGPLID---------------GLSKSGRLYEAKQLFEGMLDYGC 922
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM--FSVLA 305
+P+ +YN LI + D A ++ RMV G P + +SVL
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 92/246 (37%), Gaps = 32/246 (13%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
P L TYN LI G +E A + + G PD +YN ++ + + + + +E
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L EM + + ++ GL + G+++ A L ++ D
Sbjct: 842 LYKEMSTHEC-EANTITHNIVISGL-------------VKAGNVDDALDLYYDLMSDRDF 887
Query: 176 SESV-TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLV 234
S + T I+GLSK R EAK++ M+ C NC+
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP------------NCAIYNI---- 931
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
L+ GF G A M+ +PD Y+ L+ C VD+ + + +
Sbjct: 932 -LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 295 GFVPHM 300
G P +
Sbjct: 991 GLNPDV 996
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 113/290 (38%), Gaps = 35/290 (12%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +L+ G+ + L + M+ G P+ +T+N L C V A
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGC-------PPNTITFNTLFDCLCKNDEVTLA 627
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L +L M +MG PD +YN +I G + + +A +M K+++ + V +L+
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM--KKLVYPDFVTLCTLLP 685
Query: 139 GLSD----EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE-------SVTESVFING 187
G+ EDAY + N D + I L+E S +E + NG
Sbjct: 686 GVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIG--SILAEAGIDNAVSFSERLVANG 743
Query: 188 LSKKARTREAKEILLSMISNSCLSKTT---HTTYDALIENCSNNEFKSLVELVKGFRMRG 244
+ R+ IL+ +I SC T ++ ++ L+ G +
Sbjct: 744 IC-----RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEA 798
Query: 245 LVSEAARAHDTMLHGNHK---PDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+ E A+ D L PD YNFL+ + + +D+ + +Y M
Sbjct: 799 DMIEIAQ--DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 126/303 (41%), Gaps = 47/303 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G P T+ SL +N +C F + +L DQ++ G P++V
Sbjct: 140 MMKLGFEPSIVTFGSL-------VNGFCHVNRFYEAMSLVDQIVGLGY-------EPNVV 185
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
YN +I C G+V AL +L+ M +MG+ PD V+YN +I+ G + + +M
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+RM G+S D +S+L++ Y +G + +A E+ V
Sbjct: 246 -----MRM----------GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIV 290
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T + INGL EAK++L ++S TY+ LI N + + G
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNA--VTYNTLI-----NGYCKAKRVDDG 343
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
++ ++S DT YN L +C+ A + RMV G P
Sbjct: 344 MKILCVMSRDGVDGDTF----------TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393
Query: 300 MFS 302
M++
Sbjct: 394 MYT 396
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 37/226 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G+SPD T+S+L I+ Y G+ + +++MI V +P++V
Sbjct: 245 MMRMGISPDVITFSAL-------IDVYGKEGQLLEAKKQYNEMIQRSV-------NPNIV 290
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN+LI G C G ++EA +L + G P+AV+YN +I+G+C+ + ++ M
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM 350
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSS----------------------LMNDYLAQGD 158
+ + Y +L QG +S+ L++ G
Sbjct: 351 SRDGV-DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK 409
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM 204
+ KA + ++ + +T ++ I GL K + +A + S+
Sbjct: 410 IGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSL 455
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 106/271 (39%), Gaps = 44/271 (16%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
S L ++ LI +C R+ AL L M ++G P V++ +++GFC + + YE
Sbjct: 111 SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV---NRFYE 167
Query: 116 LKMEMDEKRILRMEE--VVYESLMQGLSDED----------------------AYSSLMN 151
+D+ L E V+Y +++ L ++ Y+SL+
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
G + + ++ G + +T S I+ K+ + EAK+
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKK------------ 275
Query: 212 KTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
Y+ +I+ N + L+ G + GL+ EA + + ++ P+ YN L
Sbjct: 276 -----QYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Query: 272 IVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
I +C+ K VD + M G F+
Sbjct: 331 INGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 116/295 (39%), Gaps = 45/295 (15%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
+WR +P +Y+++ A F S+VS+ D+M + V SPS T
Sbjct: 366 MWR-CTPTVVSYNTVIKALFES------KAHVSEVSSWFDKMKADSV-------SPSEFT 411
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
Y+ LI GYC RVE+AL +L M E G P +Y +I+ + + A EL E+
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 122 EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
E G Y+ ++ + G + +A L E+ + G +
Sbjct: 472 ENF--------------GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAY 517
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFR 241
+ ++G+ K EA +L M N C + + S ++ GF
Sbjct: 518 NALMSGMVKAGMINEANSLLRKMEENGCRA-----------------DINSHNIILNGFA 560
Query: 242 MRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
G+ A +T+ H KPDG YN L+ ++A M M GF
Sbjct: 561 RTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 123/315 (39%), Gaps = 59/315 (18%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
+ P E Y++L YF + G+ K +L ++M G SP++ TY L
Sbjct: 264 MQPTEKIYTTLLGIYFKV-------GKVEKALDLFEEMKRAGC-------SPTVYTYTEL 309
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
I G GRV+EA G + M GL+PD V N +++ ++ G+ EL E +
Sbjct: 310 IKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV---GRVEELTNVFSEMGM 366
Query: 126 LRMEEVV--YESLMQGLSDEDA-----------------------YSSLMNDYLAQGDME 160
R V Y ++++ L + A YS L++ Y +E
Sbjct: 367 WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 426
Query: 161 KAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA 220
KA +L E+ G+ IN L K R A E+ +
Sbjct: 427 KALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL-----------------FKE 469
Query: 221 LIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L EN N + ++K F G +SEA + M + PD YN L+ +
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 281 VDKAYNMYTRMVHYG 295
+++A ++ +M G
Sbjct: 530 INEANSLLRKMEENG 544
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 23/187 (12%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
L++ L + G SS Y +I + G+ S+ +L ++M + G PD +
Sbjct: 466 LFKELKENFGNVSS--RVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD-------VYA 516
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
YNAL+ G G + EA +LR M E G D S+NI+++GF R P
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVP----------- 565
Query: 122 EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
+R + M E + S ++ D Y++L+ + G E+A + RE+ G+ +++T
Sbjct: 566 -RRAIEMFETIKHSGIK--PDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITY 622
Query: 182 SVFINGL 188
S ++ +
Sbjct: 623 SSILDAV 629
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 122/305 (40%), Gaps = 45/305 (14%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
R P TY+S+ I G+ KV ++ +M + G P +TY+
Sbjct: 191 RKCKPTSSTYNSV-------ILMLMQEGQHEKVHEVYTEMCNEG------DCFPDTITYS 237
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
ALI Y LGR + A+ + M + + P Y ++ + ++ + KA +L EM K
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM--K 295
Query: 124 RILRMEEV-VYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
R V Y L++GL G +++AY +++ DG + V +
Sbjct: 296 RAGCSPTVYTYTELIKGLG-------------KAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
+N L K R E + M C T +Y+ +I K+L F
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTP--TVVSYNTVI--------KAL------FES 386
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+ VSE + D M + P Y+ LI +C+ V+KA + M GF P +
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 446
Query: 303 VLALI 307
+LI
Sbjct: 447 YCSLI 451
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 82/151 (54%), Gaps = 15/151 (9%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G+ P+E Y+ + + +F GE S V +++M+ NG +++
Sbjct: 344 MIKKGMRPNEFAYNVMIHGHFKR-------GEISLVEAFYNEMLRNGY-------GGTML 389
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ N +I G+C G+ +EA I + M E G++P+A++YN +I GFC+ + K +L E+
Sbjct: 390 SCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMN 151
+ L+ + Y +L++ L D+ ++ +N
Sbjct: 450 -KALGLKPSGMAYAALVRNLKMSDSVATSLN 479
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 31/245 (12%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
L +GL P + Y+ L + + + N C+ S+V LH + N PS+
Sbjct: 240 LKQGLDPGQYVYAKLISGFCEIGNYACM----SEV--LHTMIAWNHF--------PSMYI 285
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
Y +I G C + EA I + + + G +PD V Y +I GFC G A +L EM
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI 345
Query: 122 EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
+K + +E AY+ +++ + +G++ E+ +GY ++
Sbjct: 346 KKGM--------------RPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSC 391
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGF 240
+ I G ++ EA EI +M TY+ALI+ C N+ + ++L K
Sbjct: 392 NTMIKGFCSHGKSDEAFEIFKNMSETGVTPNA--ITYNALIKGFCKENKVEKGLKLYKEL 449
Query: 241 RMRGL 245
+ GL
Sbjct: 450 KALGL 454
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 104/285 (36%), Gaps = 38/285 (13%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
LI A C GG+ S+ L Q + G+ P Y LI G+C +G +L
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGL-------DPGQYVYAKLISGFCEIGNYACMSEVL 271
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
M P Y +I G C ++ +AY + + +K + VVY ++++G +
Sbjct: 272 HTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAP-DRVVYTTMIRGFCE 330
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
+G + A L E+ G +V I+G K+ EI L
Sbjct: 331 -------------KGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRG------EISL 371
Query: 203 SMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHK 262
Y+ ++ N S ++KGF G EA M
Sbjct: 372 -----------VEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 263 PDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
P+ YN LI C+ V+K +Y + G P + AL+
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 32/228 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML G +PD TY+ + A F L G+ ++ L D+M+ +G SP L
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRL-------GKTDRLYRLLDEMVKDGF-------SPDLY 293
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN L++ + AL +L M E+G+ P + + +I G R GK K M
Sbjct: 294 TYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR---AGKLEACKYFM 350
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
DE ++ G + D Y+ ++ Y++ G++EKA + +E+ G L
Sbjct: 351 DE------------TVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVF 398
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSN 227
T + I G + +EA +L M S C Y L+ N N
Sbjct: 399 TYNSMIRGFCMAGKFKEACALLKEMESRGC--NPNFVVYSTLVNNLKN 444
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G +PD Y+ + Y S GGE K + +M G LP+ + TYN+
Sbjct: 357 GCTPDVVCYTVMITGYIS-------GGELEKAEEMFKEMTEKGQLPN-------VFTYNS 402
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+I G+C G+ +EA +L+ M G +P+ V Y+ +++ + +A+E+ +M EK
Sbjct: 403 MIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 33/237 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLG----- 73
AY ++INA C G F K L DQM LP F P TY LI YC G
Sbjct: 202 AYNTIINALCRVGNFKKARFLLDQM----QLPGF-RYPPDTYTYTILISSYCRYGMQTGC 256
Query: 74 ------RVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILR 127
R+ EA + R M G PD V+YN +I G C+ G+A EL +M K
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTK---- 312
Query: 128 MEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY-LSESVTESVFIN 186
+ ++ Y+S + Y ++E A + R + G+ + S T + I+
Sbjct: 313 ----------GCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIH 362
Query: 187 GLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMR 243
L + R EA+++++ M+ + + TY + + S+ S ++ RMR
Sbjct: 363 ALVETRRAAEARDLVVEMVEAGLVPR--EYTYKLVCDALSSEGLASTLDEELHKRMR 417
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 97/242 (40%), Gaps = 41/242 (16%)
Query: 73 GRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVV 132
G V+EAL M E PD +YN +I+ CR+ G + + +D+ +++
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRV---GNFKKARFLLDQ---MQLPGFR 232
Query: 133 YESLMQGLSDEDAYSSLMNDYLAQG-----------DMEKAYILDREIAHDGYLSESVTE 181
Y D Y+ L++ Y G M +A + RE+ G++ + VT
Sbjct: 233 YP------PDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCS-NNEFKSLVELVKGF 240
+ I+G K R A E+ M + C+ TY++ I S NE + +E+++
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVP--NQVTYNSFIRYYSVTNEIEGAIEMMRTM 344
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
+ G HG P Y LI + +A ++ MV G VP
Sbjct: 345 KKLG-------------HG--VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPRE 389
Query: 301 FS 302
++
Sbjct: 390 YT 391
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML+RG PD TY+ LI+ C + L + M G +P+ V
Sbjct: 274 MLFRGFVPDVVTYN-------CLIDGCCKTNRIGRALELFEDMKTKGCVPN-------QV 319
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLS-PDAVSYNIVISGFCRIREPGKAYELKME 119
TYN+ I Y +E A+ ++R M ++G P + +Y +I R +A +L +E
Sbjct: 320 TYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVE 379
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSL 149
M E ++ E Y+ + LS E S+L
Sbjct: 380 MVEAGLV-PREYTYKLVCDALSSEGLASTL 408
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 119/292 (40%), Gaps = 46/292 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +++ +F ++ L D+M+ +G P+ VTYN LI+ Y + EA+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGC-------QPNTVTYNRLIHSYGRANYLNEAM 419
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M E G PD V+Y +I KA L + MD +Y+ + G
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIH------AKAGFLDIAMD----------MYQRMQAG 463
Query: 140 LSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
D YS ++N G + A+ L E+ G VT ++ ++ L KAR +
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAKARNYQN 522
Query: 198 KEILLSMISNSCL--SKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDT 255
L + N+ K T++ ++ +C G + EA
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHC------------------GYLEEAEAVFTE 564
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
M N PD VY L+ + NV+KA+ Y M+H G P++ + +L+
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 113/266 (42%), Gaps = 43/266 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLG--GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
GLSPD TYS + N CLG G L +M+ G +P+LVTY
Sbjct: 464 GLSPDTFTYSVIIN---------CLGKAGHLPAAHKLFCEMVDQGC-------TPNLVTY 507
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVIS--GFCRIREPGKAYELKMEM 120
N ++ + + AL + R M G PD V+Y+IV+ G C E +A + EM
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA--VFTEM 565
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+K + DE Y L++ + G++EKA+ + + H G T
Sbjct: 566 QQKNWI--------------PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ ++ + + EA E+L +M++ + + TY L+ C++ K L GF
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGL--RPSLQTYTLLLSCCTDGRSK----LDMGF 665
Query: 241 RMRGLVSEAARAHDTMLH-GNHKPDG 265
+ + S AH +L PDG
Sbjct: 666 CGQLMASTGHPAHMFLLKMPAAGPDG 691
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P+ +TYN++I G+C RV++A +L M G SPD V+++ +I+G+C+ + E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
EM + I +++ Y++L++ + GD++ A L E+ G
Sbjct: 68 FCEMHRRGI--------------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 113
Query: 177 ESVTESVFINGLSKKARTREAKEIL 201
+ +T + GL K R+A IL
Sbjct: 114 DYITFHCMLAGLCSKKELRKAFAIL 138
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M +G SPD T+S+L IN YC + +M G++ + V
Sbjct: 36 MASKGCSPDVVTFSTL-------INGYCKAKRVDNGMEIFCEMHRRGIVAN-------TV 81
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
TY LI+G+C +G ++ A +L M G++PD ++++ +++G C +E KA+ +
Sbjct: 82 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 137
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y S+I+ +C + D M G SP +VT++ LI GYC RV+
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGC-------SPDVVTFSTLINGYCKAKRVDNG 64
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+ I M G+ + V+Y +I GFC++ + A +L EM
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 106
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 31/223 (13%)
Query: 10 EGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGY 69
+G SS++ +Y ++I+ C + +M G+ SP+LVT+N + GY
Sbjct: 419 DGLLSSVY-SYNAVIDCLCKARRIENAAMFLTEMQDRGI-------SPNLVTFNTFLSGY 470
Query: 70 CFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRME 129
G V++ G+L + G PD ++++++I+ CR +E A++ EM E I
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI-EPN 529
Query: 130 EVVYESLMQ---------------------GLS-DEDAYSSLMNDYLAQGDMEKAYILDR 167
E+ Y L++ GLS D AY++ + + ++KA L +
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 168 EIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL 210
+ G ++ T S I LS+ R EA+E+ S+ + C+
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCV 632
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 45/215 (20%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS------- 56
RG+SP+ T FN + S Y + G+ KV + ++++ +G PD +T S
Sbjct: 454 RGISPNLVT----FNTFLS---GYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLC 506
Query: 57 ---------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
P+ +TYN LI C G + ++ + M E GLSPD
Sbjct: 507 RAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLY 566
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRI-LRMEEVVYESLMQGLSD-------EDAYS 147
+YN I FC++R+ KA EL M RI L+ + Y +L++ LS+ + +S
Sbjct: 567 AYNATIQSFCKMRKVKKAEELLKTM--LRIGLKPDNFTYSTLIKALSESGRESEAREMFS 624
Query: 148 SLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
S+ K + + ++ G E+V+ S
Sbjct: 625 SIERHGCVPDSYTKRLVEELDLRKSGLSRETVSAS 659
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 120/308 (38%), Gaps = 53/308 (17%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCL--GGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
RG PD SS FNA S CL G + + + D + GV P F + LV
Sbjct: 349 RGYIPD----SSTFNAAMS-----CLLKGHDLVETCRIFDGFVSRGVKPGF---NGYLVL 396
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
AL+ R E L+ M GL SYN VI C+ R A EM
Sbjct: 397 VQALLNAQ----RFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 122 EKRILRMEEVVYESLMQGLSDE-DAYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESV 179
++ G+S +++ ++ Y +GD++K + +L++ + H G+ + +
Sbjct: 453 DR---------------GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH-GFKPDVI 496
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T S+ IN L + ++A + M+ + TY+ LI +C +
Sbjct: 497 TFSLIINCLCRAKEIKDAFDCFKEMLEWGI--EPNEITYNILIRSCCST----------- 543
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
G + + M PD YN I C+ + V KA + M+ G P
Sbjct: 544 ----GDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPD 599
Query: 300 MFSVLALI 307
F+ LI
Sbjct: 600 NFTYSTLI 607
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 147/380 (38%), Gaps = 94/380 (24%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ P Y+++ +A L+ + L + K QM +G PD TYN
Sbjct: 175 GMKPSTRLYNAVIDA---LVKSNSLDLAYLK----FQQMRSDGCKPD-------RFTYNI 220
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC---------------RIRE 109
LI+G C G V+EA+ +++ M + G P+ +Y I+I GF R+R+
Sbjct: 221 LIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRK 280
Query: 110 --------------------PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSL 149
P KA+E+ + EK ++ V Y++++ LS+ ++ +
Sbjct: 281 LNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDS-NLQRVGYDAVLYCLSN-NSMAKE 338
Query: 150 MNDYLAQGDMEKAYILDREIAH-------------------DGYLSESVTES-----VFI 185
+L + E+ YI D + DG++S V V +
Sbjct: 339 TGQFLRKIG-ERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLV 397
Query: 186 NGLSKKARTREAKEILLSMISNSCLSK--TTHTTYDAL-----IENCS-----------N 227
L R E L M + LS + + D L IEN + +
Sbjct: 398 QALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGIS 457
Query: 228 NEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNM 287
+ + G+ +RG V + + +L KPD ++ +I CR K + A++
Sbjct: 458 PNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDC 517
Query: 288 YTRMVHYGFVPHMFSVLALI 307
+ M+ +G P+ + LI
Sbjct: 518 FKEMLEWGIEPNEITYNILI 537
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 119/292 (40%), Gaps = 46/292 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +++ +F ++ L D+M+ +G P+ VTYN LI+ Y + EA+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGC-------QPNTVTYNRLIHSYGRANYLNEAM 419
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M E G PD V+Y +I KA L + MD +Y+ + G
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIH------AKAGFLDIAMD----------MYQRMQAG 463
Query: 140 LSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
D YS ++N G + A+ L E+ G VT ++ ++ L KAR +
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAKARNYQN 522
Query: 198 KEILLSMISNSCL--SKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDT 255
L + N+ K T++ ++ +C G + EA
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHC------------------GYLEEAEAVFTE 564
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
M N PD VY L+ + NV+KA+ Y M+H G P++ + +L+
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 113/266 (42%), Gaps = 43/266 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLG--GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
GLSPD TYS + N CLG G L +M+ G +P+LVTY
Sbjct: 464 GLSPDTFTYSVIIN---------CLGKAGHLPAAHKLFCEMVDQGC-------TPNLVTY 507
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVIS--GFCRIREPGKAYELKMEM 120
N ++ + + AL + R M G PD V+Y+IV+ G C E +A + EM
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA--VFTEM 565
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+K + DE Y L++ + G++EKA+ + + H G T
Sbjct: 566 QQKNWI--------------PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ ++ + + EA E+L +M++ + + TY L+ C++ K L GF
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGL--RPSLQTYTLLLSCCTDGRSK----LDMGF 665
Query: 241 RMRGLVSEAARAHDTMLH-GNHKPDG 265
+ + S AH +L PDG
Sbjct: 666 CGQLMASTGHPAHMFLLKMPAAGPDG 691
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 119/292 (40%), Gaps = 46/292 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +++ +F ++ L D+M+ +G P+ VTYN LI+ Y + EA+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGC-------QPNTVTYNRLIHSYGRANYLNEAM 419
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ M E G PD V+Y +I KA L + MD +Y+ + G
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIH------AKAGFLDIAMD----------MYQRMQAG 463
Query: 140 LSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
D YS ++N G + A+ L E+ G VT ++ ++ L KAR +
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAKARNYQN 522
Query: 198 KEILLSMISNSCL--SKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDT 255
L + N+ K T++ ++ +C G + EA
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHC------------------GYLEEAEAVFTE 564
Query: 256 MLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
M N PD VY L+ + NV+KA+ Y M+H G P++ + +L+
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 113/266 (42%), Gaps = 43/266 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLG--GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
GLSPD TYS + N CLG G L +M+ G +P+LVTY
Sbjct: 464 GLSPDTFTYSVIIN---------CLGKAGHLPAAHKLFCEMVDQGC-------TPNLVTY 507
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVIS--GFCRIREPGKAYELKMEM 120
N ++ + + AL + R M G PD V+Y+IV+ G C E +A + EM
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA--VFTEM 565
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+K + DE Y L++ + G++EKA+ + + H G T
Sbjct: 566 QQKNWI--------------PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ ++ + + EA E+L +M++ + + TY L+ C++ K L GF
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGL--RPSLQTYTLLLSCCTDGRSK----LDMGF 665
Query: 241 RMRGLVSEAARAHDTMLH-GNHKPDG 265
+ + S AH +L PDG
Sbjct: 666 CGQLMASTGHPAHMFLLKMPAAGPDG 691
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 101/240 (42%), Gaps = 31/240 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P VTYNAL+ + G EAL +L+ M E D+V+YN +++ + R +A +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
M +K + + + Y+++++ Y G ++A L + G +
Sbjct: 374 IEMMTKKGV--------------MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+ T + ++ L KK+R+ E ++L M SN C T++ ++ C N
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC--SPNRATWNTMLALCGN--------- 468
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+G+ R M +PD +N LI + RC + A MY M GF
Sbjct: 469 ------KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 32/247 (12%)
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
Y +++ Y G+ E+A+ + M EMG SP V+YN+++ F ++ G+++
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKM---GRSW------- 262
Query: 122 EKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++IL V+ E +GL DE S++++ +G + +A E+ GY +VT
Sbjct: 263 -RKIL---GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ + K EA +L M NSC + + TY+ ELV +
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADS--VTYN---------------ELVAAY 361
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
G EAA + M P+ Y +I + + D+A ++ M G VP+
Sbjct: 362 VRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNT 421
Query: 301 FSVLALI 307
+ A++
Sbjct: 422 CTYNAVL 428
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GLSPD TY+SL + Y GE K + + + + PD LV+YN
Sbjct: 661 GLSPDLVTYNSLMDMYVRR-------GECWKAEEILKTLEKSQLKPD-------LVSYNT 706
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK--MEMDE 122
+I G+C G ++EA+ +L M E G+ P +YN +SG+ + G E++ +E
Sbjct: 707 VIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAM---GMFAEIEDVIECMA 763
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMN 151
K R E+ ++ ++ G YS M+
Sbjct: 764 KNDCRPNELTFKMVVDGYCRAGKYSEAMD 792
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 113/270 (41%), Gaps = 52/270 (19%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDF-------- 52
M +G P E +YS + + Y GG + + + +++ + P +
Sbjct: 552 MKSKGFKPTETSYSLM-------LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLL 604
Query: 53 -------VTGS-------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ GS P +V +N+++ + ++A GIL + E GLSP
Sbjct: 605 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMND 152
D V+YN ++ + R E KA E+ ++ EK L+ + V Y ++++G
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEI-LKTLEKSQLKPDLVSYNTVIKG------------- 710
Query: 153 YLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
+ +G M++A + E+ G T + F++G + E ++++ M N C +
Sbjct: 711 FCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC--R 768
Query: 213 TTHTTYDALIEN-CSNNEFKSLVELVKGFR 241
T+ +++ C ++ ++ V +
Sbjct: 769 PNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 56/289 (19%)
Query: 10 EGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGY 69
EG Y + Y SL+N C G +V+++ ++ +G+ + VTYN L++
Sbjct: 273 EGCYPDIV-TYNSLVNYNCRRGNLEEVASVIQHILSHGL-------ELNTVTYNTLLHSL 324
Query: 70 C---FLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRIL 126
C + VEE L I M + P ++YNI+I+G C+ R +A + +M E++ L
Sbjct: 325 CSHEYWDEVEEILNI---MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL 381
Query: 127 RMEEVVYESLMQGLSDE----DA------------------YSSLMNDYLAQGDMEKAYI 164
+ V Y +++ +S E DA Y+S+++ +G M+KA
Sbjct: 382 P-DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALE 440
Query: 165 LDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN 224
L ++ G + +T I G + EA ++L + + +TY +I+
Sbjct: 441 LYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG--NGIRGSTYRLVIQG 498
Query: 225 -CSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
C E + +E+V + ML G KPD +Y ++
Sbjct: 499 LCKKKEIEMAIEVV----------------EIMLTGGCKPDETIYTAIV 531
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 125/319 (39%), Gaps = 45/319 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GLS D + +++ C G+ + L + M + +P F + S
Sbjct: 92 GLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCS-------N 144
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ G + ++++A+ ILR M G PD ++YN++I C+ A L +M
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM---- 200
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
SL D Y++++ G+ E+A ++ +G +T +V
Sbjct: 201 ----------SLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVL 250
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE-NCSNNEFKSLVELVKGFRMR 243
+ + + + A E+L M C TY++L+ NC + + +++
Sbjct: 251 VELVCRYCGSARAIEVLEDMAVEGCYPDI--VTYNSLVNYNCRRGNLEEVASVIQHILSH 308
Query: 244 GLVSEAARAHDTMLHG--------------------NHKPDGGVYNFLIVEHCRCKNVDK 283
GL ++T+LH ++ P YN LI C+ + + +
Sbjct: 309 GLELNTV-TYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSR 367
Query: 284 AYNMYTRMVHYGFVPHMFS 302
A + + +M+ +P + +
Sbjct: 368 AIDFFYQMLEQKCLPDIVT 386
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 118/297 (39%), Gaps = 46/297 (15%)
Query: 8 PDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIY 67
P +G S+F +Y +LINAY G + L D+M + + SPS++TYN +I
Sbjct: 168 PSQGVSRSVF-SYTALINAYGRNGRYETSLELLDRMKNEKI-------SPSILTYNTVIN 219
Query: 68 GYCFLGRV--EEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
C G + E LG+ M G+ PD V+YN ++S C IR G DE
Sbjct: 220 A-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-CAIRGLG---------DEA-- 266
Query: 126 LRMEEVVYESLMQG--LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
E+V+ ++ G + D YS L+ + +EK L E+A G L + + +V
Sbjct: 267 ----EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 184 FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMR 243
+ +K +EA + M + C N + L+ L F
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNA--------------NTYSVLLNL---FGQS 365
Query: 244 GLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
G + + M N PD YN LI + ++ MV P M
Sbjct: 366 GRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 39/255 (15%)
Query: 19 AYFSLINAYCLGG-EFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
Y ++INA GG ++ + L +M H G+ PD +VTYN L+ G +E
Sbjct: 213 TYNTVINACARGGLDWEGLLGLFAEMRHEGIQPD-------IVTYNTLLSACAIRGLGDE 265
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
A + R M + G+ PD +Y+ ++ F ++R K +L EM
Sbjct: 266 AEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASG-------------- 311
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
L D +Y+ L+ Y G +++A + ++ G + T SV +N + R +
Sbjct: 312 GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV 371
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
+++ L M K+++T DA N L++ F G E M+
Sbjct: 372 RQLFLEM-------KSSNTDPDAATYNI----------LIEVFGEGGYFKEVVTLFHDMV 414
Query: 258 HGNHKPDGGVYNFLI 272
N +PD Y +I
Sbjct: 415 EENIEPDMETYEGII 429
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 114/294 (38%), Gaps = 49/294 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PD TYS L + L KV +L +M G LPD + +YN
Sbjct: 277 GIVPDLTTYSHLVETFGKL-------RRLEKVCDLLGEMASGGSLPD-------ITSYNV 322
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ Y G ++EA+G+ M G +P+A +Y+++++ F + +L +EM
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 125 ILRMEEVVYESLMQGLSDEDA--YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
+D DA Y+ L+ + G ++ L ++ + + T
Sbjct: 383 ----------------TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE 426
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
I K +A++IL M +N + + K+ +++ F
Sbjct: 427 GIIFACGKGGLHEDARKILQYMTANDIVPSS-----------------KAYTGVIEAFGQ 469
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
L EA A +TM P ++ L+ R V ++ + +R+V G
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 41/264 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML ++P TY++L NA S G + + + +M NGV PD LV
Sbjct: 72 MLRAAIAPSRSTYNNLINACGS-------SGNWREALEVCKKMTDNGVGPD-------LV 117
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N ++ Y + +AL M + PD ++NI+I ++ + +A +L M
Sbjct: 118 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 177
Query: 121 DEKRI-LRMEEVVYESLM---------------------QGLSDED-AYSSLMNDYLAQG 157
EKR R + V + S+M +GL +Y++LM Y G
Sbjct: 178 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 237
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
A + +I +G + + V+ + +N + + +AKE+ L M K T
Sbjct: 238 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER--RKPNVVT 295
Query: 218 YDALIENCSNNEFKSLVELVKGFR 241
Y+ALI+ +N F L E V+ FR
Sbjct: 296 YNALIDAYGSNGF--LAEAVEIFR 317
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 38/258 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
+ S+++ Y + GE + + M+ G+ P++V+YNAL+ Y G AL
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMVAEGL-------KPNIVSYNALMGAYAVHGMSGTAL 243
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+L + + G+ PD VSY +++ + R R+PGKA E+ + M ++R R VV
Sbjct: 244 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER--RKPNVV------- 294
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
Y++L++ Y + G + +A + R++ DG V+ + S R K+
Sbjct: 295 -----TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS-----RSKKK 344
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+ + + ++ S+ + A N + + + EL K + + +M
Sbjct: 345 VNVDTVLSAAQSRGINLNTAAY--NSAIGSYINAAELEKAIAL----------YQSMRKK 392
Query: 260 NHKPDGGVYNFLIVEHCR 277
K D + LI CR
Sbjct: 393 KVKADSVTFTILISGSCR 410
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 42/216 (19%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT------------------ 61
Y +LI+AY G ++ + QM +G+ P+ V+ L
Sbjct: 296 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ 355
Query: 62 ----------YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPG 111
YN+ I Y +E+A+ + + M + + D+V++ I+ISG CR+ +
Sbjct: 356 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYP 415
Query: 112 KAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAH 171
+A EM++ I +EV YSS++ Y QG + +A + ++
Sbjct: 416 EAISYLKEMEDLSIPLTKEV--------------YSSVLCAYSKQGQVTEAESIFNQMKM 461
Query: 172 DGYLSESVTESVFINGLSKKARTREAKEILLSMISN 207
G + + + ++ + + +A E+ L M +N
Sbjct: 462 AGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN 497
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 111/286 (38%), Gaps = 38/286 (13%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+LIN GE K + D + P+ V++N LI G+ E A +
Sbjct: 156 TLINVLVDNGELEKAKSFFDGAKDMRL-------RPNSVSFNILIKGFLDKCDWEAACKV 208
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
M EM + P V+YN +I CR + GKA L +M +KRI R V + LM+GL
Sbjct: 209 FDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRI-RPNAVTFGLLMKGLC 267
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
+G+ +A L ++ + G V + ++ L K+ R EAK +L
Sbjct: 268 -------------CKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLL 314
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
M K D +I N LV V EA R M
Sbjct: 315 GEM-------KKRRIKPDVVIYNI----------LVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
KP+ Y +I CR ++ D N+ M+ P + + ++
Sbjct: 358 KPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMV 403
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 97/245 (39%), Gaps = 37/245 (15%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGF---CRIREPGKAY 114
++ + N LI G +E+A G +M L P++VS+NI+I GF C K +
Sbjct: 150 TIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVF 209
Query: 115 ELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
+ +EM+ ++ V Y SL+ L D DM KA L ++
Sbjct: 210 DEMLEME----VQPSVVTYNSLIGFLCRND-------------DMGKAKSLLEDMIKKRI 252
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLV 234
+VT + + GL K EAK+++ M C K Y L+ +
Sbjct: 253 RPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGC--KPGLVNYGILMSDLGK------- 303
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
RG + EA M KPD +YN L+ C V +AY + T M
Sbjct: 304 --------RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 355
Query: 295 GFVPH 299
G P+
Sbjct: 356 GCKPN 360
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 41/264 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML ++P TY++L NA S G + + + +M NGV PD LV
Sbjct: 204 MLRAAIAPSRSTYNNLINACGS-------SGNWREALEVCKKMTDNGVGPD-------LV 249
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+N ++ Y + +AL M + PD ++NI+I ++ + +A +L M
Sbjct: 250 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Query: 121 DEKRI-LRMEEVVYESLM---------------------QGLSDED-AYSSLMNDYLAQG 157
EKR R + V + S+M +GL +Y++LM Y G
Sbjct: 310 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 369
Query: 158 DMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
A + +I +G + + V+ + +N + + +AKE+ L M K T
Sbjct: 370 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER--RKPNVVT 427
Query: 218 YDALIENCSNNEFKSLVELVKGFR 241
Y+ALI+ +N F L E V+ FR
Sbjct: 428 YNALIDAYGSNGF--LAEAVEIFR 449
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 38/258 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
+ S+++ Y + GE + + M+ G+ P++V+YNAL+ Y G AL
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGL-------KPNIVSYNALMGAYAVHGMSGTAL 375
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+L + + G+ PD VSY +++ + R R+PGKA E+ + M ++R R VV
Sbjct: 376 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER--RKPNVV------- 426
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
Y++L++ Y + G + +A + R++ DG V+ + S R K+
Sbjct: 427 -----TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS-----RSKKK 476
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+ + + ++ S+ + A N + + + EL K + + +M
Sbjct: 477 VNVDTVLSAAQSRGINLNTAAY--NSAIGSYINAAELEKAIAL----------YQSMRKK 524
Query: 260 NHKPDGGVYNFLIVEHCR 277
K D + LI CR
Sbjct: 525 KVKADSVTFTILISGSCR 542
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 42/216 (19%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT------------------ 61
Y +LI+AY G ++ + QM +G+ P+ V+ L
Sbjct: 428 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ 487
Query: 62 ----------YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPG 111
YN+ I Y +E+A+ + + M + + D+V++ I+ISG CR+ +
Sbjct: 488 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYP 547
Query: 112 KAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAH 171
+A EM++ I +EV YSS++ Y QG + +A + ++
Sbjct: 548 EAISYLKEMEDLSIPLTKEV--------------YSSVLCAYSKQGQVTEAESIFNQMKM 593
Query: 172 DGYLSESVTESVFINGLSKKARTREAKEILLSMISN 207
G + + + ++ + + +A E+ L M +N
Sbjct: 594 AGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN 629
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 100/232 (43%), Gaps = 38/232 (16%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y L+ A+CL + S L +M+ V+PD + +Y LI G+C G+V A
Sbjct: 192 SYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPD-------VDSYKILIQGFCRKGQVNGA 244
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ +L M G PD +SY +++ CR + +AY+L M K + V Y +++
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC-NPDLVHYNTMIL 303
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
G ED M+ +LD ++ +G SV+ I GL + E K
Sbjct: 304 GFCREDRA------------MDARKVLD-DMLSNGCSPNSVSYRTLIGGLCDQGMFDEGK 350
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAA 250
+ L MIS + H + + NC LVKGF G V EA
Sbjct: 351 KYLEEMISKGF---SPHFS----VSNC----------LVKGFCSFGKVEEAC 385
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 32/231 (13%)
Query: 73 GRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVV 132
G +++A + + G+ P+ SYN+++ FC + AY+L +M E+ +
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDV------- 221
Query: 133 YESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKA 192
+ D D+Y L+ + +G + A L ++ + G++ + ++ + +N L +K
Sbjct: 222 -------VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKT 274
Query: 193 RTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARA 252
+ REA ++L M C H Y+ +I GF +A +
Sbjct: 275 QLREAYKLLCRMKLKGCNPDLVH--YNTMI---------------LGFCREDRAMDARKV 317
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSV 303
D ML P+ Y LI C D+ M+ GF PH FSV
Sbjct: 318 LDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH-FSV 367
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 31/243 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P+ +YN L+ +C + A + M E + PD SY I+I GFCR + A EL
Sbjct: 188 PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMEL 247
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+M K + D +Y++L+N + + +AY L + G
Sbjct: 248 LDDMLNKGF--------------VPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+ V + I G ++ R +A+++L M+SN C + S L
Sbjct: 294 DLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSV-----------------SYRTL 336
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+ G +G+ E + + M+ P V N L+ C V++A ++ ++ G
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 297 VPH 299
H
Sbjct: 397 TLH 399
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 34/238 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML R + PD ++Y LI +C G+ + L D M++ G +PD +
Sbjct: 216 MLERDVVPD-------VDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD-------RL 261
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y L+ C ++ EA +L M G +PD V YN +I GFCR
Sbjct: 262 SYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCR-------------- 307
Query: 121 DEKRILRMEEVVYESLMQGLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
E R + +V+ + L G S +Y +L+ QG ++ E+ G+
Sbjct: 308 -EDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFS 366
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT-TYDALIENCSNNEFKSLVEL 236
+ + G + EA +++ ++ N +T H+ T++ +I N + ++L
Sbjct: 367 VSNCLVKGFCSFGKVEEACDVVEVVMKN---GETLHSDTWEMVIPLICNEDESEKIKL 421
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 126/303 (41%), Gaps = 46/303 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PDE + L ++A C G + L + M + +L + +
Sbjct: 213 GFEPDEYVFGCL-------LDALCKHGSVKDAAKLFEDMR--------MRFPVNLRYFTS 257
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+YG+C +G++ EA +L M E G PD V Y ++SG+ + AY+L +M +R
Sbjct: 258 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDM-RRR 316
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
Y L+Q L D M ++ +ME+ Y + ++ VT +
Sbjct: 317 GFEPNANCYTVLIQALCKVDRMEEAMKVFV---EMER-YECEADV---------VTYTAL 363
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
++G K + + +L MI L + T ++ + F+ +EL++ +MR
Sbjct: 364 VSGFCKWGKIDKCYIVLDDMIKKG-LMPSELTYMHIMVAHEKKESFEECLELME--KMRQ 420
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
+ + PD G+YN +I C+ V +A ++ M G P + + +
Sbjct: 421 I--------------EYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFV 466
Query: 305 ALI 307
+I
Sbjct: 467 IMI 469
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 138/351 (39%), Gaps = 63/351 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G SP TY+ SLI+AY G + L +QM G PD +
Sbjct: 340 MVLNGFSPSIVTYN-------SLISAYARDGMLDEAMELKNQMAEKGTKPD-------VF 385
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY L+ G+ G+VE A+ I M G P+ ++N I + GK E+
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYG---NRGKFTEMMKIF 442
Query: 121 DEKRI--LRMEEVVYESLM-----QGLSDE-----------------DAYSSLMNDYLAQ 156
DE + L + V + +L+ G+ E + +++L++ Y
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 157 GDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHT 216
G E+A + R + G + T + + L++ +++++L M C K
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC--KPNEL 560
Query: 217 TYDALIENCSNNE----FKSLVELV-------KGFRMRGLV---------SEAARAHDTM 256
TY +L+ +N + SL E V + ++ LV EA RA +
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
PD N ++ + R + V KA + M GF P M + +L+
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 122/307 (39%), Gaps = 53/307 (17%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GLSPD T+++L + + G S+VS + +M G +P+ T+N
Sbjct: 449 GLSPDIVTWNTL-------LAVFGQNGMDSEVSGVFKEMKRAGFVPE-------RETFNT 494
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI Y G E+A+ + R M + G++PD +YN V++ R ++ ++ EM++ R
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
+ E+ Y SL+ AY +EI L+E V V
Sbjct: 555 C-KPNELTYCSLLH-----------------------AYANGKEIGLMHSLAEEVYSGVI 590
Query: 185 INGLSKKARTREAKEILLSMISNSC----LSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
E + +LL + C L + L E + + +L +V +
Sbjct: 591 -----------EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
R +V++A D M P YN L+ H R + K+ + ++ G P +
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 301 FSVLALI 307
S +I
Sbjct: 700 ISYNTVI 706
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L +G+ PD +Y ++I AYC S + +M ++G++PD ++
Sbjct: 690 ILAKGIKPD-------IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD-------VI 735
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA 113
TYN I Y EEA+G++R M + G P+ +YN ++ G+C++ +A
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 116/278 (41%), Gaps = 39/278 (14%)
Query: 31 GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGL 90
G S +N+ + + +G D + +Y +LI + GR EA+ + + M E G
Sbjct: 187 GRVSSAANMFNGLQEDGFSLD-------VYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSL 149
P ++YN++++ F ++ P ++ +V + G++ D Y++L
Sbjct: 240 KPTLITYNVILNVFGKMGTPWN--------------KITSLVEKMKSDGIAPDAYTYNTL 285
Query: 150 MNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSC 209
+ ++A + E+ G+ + VT + ++ K R +EA ++L M+ N
Sbjct: 286 ITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 210 LSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYN 269
+ TY++LI + G++ EA + M KPD Y
Sbjct: 346 --SPSIVTYNSLIS---------------AYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 270 FLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
L+ R V+ A +++ M + G P++ + A I
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 28/195 (14%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
RG SPD T +S+ ++ Y +K + + D M G +PS+ TYN
Sbjct: 623 RGFSPDITTLNSM-------VSIYGRRQMVAKANGVLDYMKERGF-------TPSMATYN 668
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+L+Y + ++ ILR + G+ PD +SYN VI +CR A + EM
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Query: 124 RILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV 183
I + D Y++ + Y A E+A + R + G T +
Sbjct: 729 GI--------------VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 184 FINGLSKKARTREAK 198
++G K R EAK
Sbjct: 775 IVDGYCKLNRKDEAK 789
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 34/250 (13%)
Query: 55 GSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAY 114
G P TYN LI+G G ++AL + M + + P V++ +I G C+ +A
Sbjct: 148 GKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEA- 206
Query: 115 ELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
LKM+ D ++ + V+ Y+SL+ G++ A+ L E A++G
Sbjct: 207 -LKMKHDMLKVYGVRPTVH-----------IYASLIKALCQIGELSFAFKLKDE-AYEGK 253
Query: 175 LS-ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKS 232
+ ++ S I+ L K R+ E IL M C K TY+ LI C N+ +S
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGC--KPDTVTYNVLINGFCVENDSES 311
Query: 233 LVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
A R D M+ KPD YN ++ R K ++A ++ M
Sbjct: 312 ----------------ANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMP 355
Query: 293 HYGFVPHMFS 302
G P S
Sbjct: 356 RRGCSPDTLS 365
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +LI++ G ++VS + ++M G PD VTYN LI G+C E A
Sbjct: 261 YSTLISSLIKAGRSNEVSMILEEMSEKGCKPD-------TVTYNVLINGFCVENDSESAN 313
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI---LRMEEVVYESL 136
+L M E GL PD +SYN+++ F RI++ +A L +M + +V++ L
Sbjct: 314 RVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 137 MQGLSDEDAYSSLMNDYLAQG----------------DMEKAYILDREIA--HDGYLSES 178
+GL E+A + ++++ L +G + K IL + I+ H G ++
Sbjct: 374 CEGLQFEEA-AVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDA 432
Query: 179 VTESVFINGLSKKARTREAKEILLSMI 205
SV I + K+ ++ ++LL+ +
Sbjct: 433 DVWSVMIPTMCKEPVISDSIDLLLNTV 459
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 124/304 (40%), Gaps = 52/304 (17%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLH---DQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGR 74
+ + L++ C + S +SN+H + M++NG+ PD VT + + C GR
Sbjct: 123 STFLILLSHACRAPD-SSISNVHRVLNLMVNNGLEPD-------QVTTDIAVRSLCETGR 174
Query: 75 VEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYE 134
V+EA +++ + E PD +YN ++ C+ ++ YE EM + ++ + V +
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 135 SLMQGLSDEDA----------------------YSSLMNDYLAQGDMEKAYILDREIAHD 172
L+ + + Y+++M + +A + +++ +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 173 GYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFK 231
G + +T + I GLSK R EA+ L +M+ T TY +L+ C E
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDT--ATYTSLMNGMCRKGESL 352
Query: 232 SLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+ L++ RG P+ YN L+ C+ + +DK +Y M
Sbjct: 353 GALSLLEEMEARGCA----------------PNDCTYNTLLHGLCKARLMDKGMELYEMM 396
Query: 292 VHYG 295
G
Sbjct: 397 KSSG 400
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 21/192 (10%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +++ +C + S+ ++ +M GV PD +TYN LI+G GRVEEA
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD-------QITYNTLIFGLSKAGRVEEAR 320
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
L+ M + G PD +Y +++G CR E A L EM E R + Y +L+ G
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEM-EARGCAPNDCTYNTLLHG 379
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
L + LM+ + +M K+ + ++ +GY + + L K + EA E
Sbjct: 380 L----CKARLMDKGMELYEMMKSSGV--KLESNGY-------ATLVRSLVKSGKVAEAYE 426
Query: 200 ILLSMISNSCLS 211
+ + + LS
Sbjct: 427 VFDYAVDSKSLS 438
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYN 63
+GL PD TY+SL I+ YC E K L D+M PD ++TY
Sbjct: 240 KGLKPDVVTYNSL-------IDVYCKDREIEKAYKLIDKMREEEETPD-------VITYT 285
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
+I G +G+ ++A +L+ M E G PD +YN I FC R G A +L EM +K
Sbjct: 286 TVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
P +VTYN+LI YC +E+A ++ M E +PD ++Y VI G I +P KA E
Sbjct: 243 KPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKARE 302
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+ EM E D AY++ + ++ + A L E+ G
Sbjct: 303 VLKEMKE--------------YGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS 348
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
+ T ++F LS + E+ + M+ N CL T +
Sbjct: 349 PNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMF 391
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 124/301 (41%), Gaps = 51/301 (16%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+L+ YC G+ +M G LP+ + TYN LI GYC +G ++ AL
Sbjct: 323 TLVKGYCALGKMRVAQRFFIEMERKGYLPN-------VETYNLLIAGYCDVGMLDSALDT 375
Query: 82 LRGMPEMGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
M + + ++N +I G R + K E+ + D R++ Y ++
Sbjct: 376 FNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP--YNCVIY 433
Query: 139 GLSDEDAYSSLMNDYLAQGDM---------------EKAYILDREIAHDGYLSESVTESV 183
G E+ + + L + EK + D + A+D + E S+
Sbjct: 434 GFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSI 493
Query: 184 -----FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELV 237
I+ S+ + E+ E++ M++ L +++ T++A+I C ++ + ++ V
Sbjct: 494 IVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSS--TFNAVIIGFCKQDKVMNGIKFV 551
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
+ RG V PD YN L+ E C ++ KA+ +++RMV V
Sbjct: 552 EDMAERGCV----------------PDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIV 595
Query: 298 P 298
P
Sbjct: 596 P 596
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 10 EGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGY 69
E + + F LI + C G + +DQMI G G PS++ + LI+ Y
Sbjct: 452 EKLFPRAVDRSFKLI-SLCEKGGMDDLKTAYDQMIGEG-------GVPSIIVSHCLIHRY 503
Query: 70 CFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRME 129
G++EE+L ++ M G P + ++N VI GFC+ + + +M E+
Sbjct: 504 SQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAER------ 557
Query: 130 EVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLS 189
+ D ++Y+ L+ + +GD++KA++L + + + S + LS
Sbjct: 558 --------GCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLS 609
Query: 190 KKA 192
+K
Sbjct: 610 QKT 612
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY L+ G R+ + +L+ M G++P+AV YN ++ C+ + G+A L EM
Sbjct: 184 TYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM 243
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
E ++ ++ L++ Y + + ++ +L + G++ + VT
Sbjct: 244 KE------------------PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVT 285
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
+ + L + R EA E+L + S D + N LVKG+
Sbjct: 286 VTKVMEVLCNEGRVSEALEVLERVESKG-------GKVDVVACN----------TLVKGY 328
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G + A R M + P+ YN LI +C +D A + + M
Sbjct: 329 CALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM 379
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 125/303 (41%), Gaps = 39/303 (12%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
LI+AYC + + L ++ G +PD +VT ++ C GRV EAL +L
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPD-------VVTVTKVMEVLCNEGRVSEALEVL 306
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSD 142
+ G D V+ N ++ G+C + KM + ++ + ME Y L +
Sbjct: 307 ERVESKGGKVDVVACNTLVKGYCALG--------KMRVAQRFFIEMERKGY------LPN 352
Query: 143 EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILL 202
+ Y+ L+ Y G ++ A ++ D T + I GLS RT + +IL
Sbjct: 353 VETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILE 412
Query: 203 SMISNSCLSKTTHTTYDALI-----ENCSNNEFKSLVELVKGFRM-------------RG 244
M + + Y+ +I EN + + L+++ K F +G
Sbjct: 413 MMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKG 472
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVL 304
+ + A+D M+ P V + LI + + ++++ + MV G++P +
Sbjct: 473 GMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFN 532
Query: 305 ALI 307
A+I
Sbjct: 533 AVI 535
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 31/252 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+++TY L+ G+C + + EA I M + GL PD V++N+++ G R R+ A +
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK 354
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L M K + +Y+ ++ D+ Q ME A ++ G
Sbjct: 355 LFHVMKSK--------------GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
++ + I G + + E+L M TY+ALI+ +N +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG--HPPDGKTYNALIKLMANQK------ 452
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
+ A R ++ M+ +P +N ++ + +N + ++ M+ G
Sbjct: 453 ---------MPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 296 FVPHMFSVLALI 307
P S LI
Sbjct: 504 ICPDDNSYTVLI 515
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 112/306 (36%), Gaps = 58/306 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y L+N +C + + + + MI G+ PD +V +N ++ G + +A
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPD-------IVAHNVMLEGLLRSRKKSDA 352
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ + M G P+ SY I+I FC K E I +++V L
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFC-----------KQSSMETAIEYFDDMVDSGLQ- 400
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
D Y+ L+ + Q ++ Y L +E+ G+ + T + I ++ + A
Sbjct: 401 --PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHAT 458
Query: 199 EILLSMISNSCLSKTTHT-------------------TYDALIENCSNNEFKSLVELVKG 239
I MI N + + HT ++ +I+ + S L++G
Sbjct: 459 RIYNKMIQNE-IEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG 517
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
G EA R + ML D G+ LI YN + H G P
Sbjct: 518 LIGEGKSREACRYLEEML------DKGMKTPLI-----------DYNKFAADFHRGGQPE 560
Query: 300 MFSVLA 305
+F LA
Sbjct: 561 IFEELA 566
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 54/252 (21%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQM-------IHNGVLPDFVTGS--------------P 57
++ +LI+ Y GE S L DQM I+N ++ FV
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
+++T+ +I+GYC + ++ A + MPE L VS+N +I G+C+ ++P + L
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAMPERNL----VSWNTMIGGYCQNKQPQEGIRLF 261
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDEDAYS----------------------SLMNDYLA 155
EM L ++V S++ +SD A S ++++ Y
Sbjct: 262 QEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSK 321
Query: 156 QGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTH 215
G++EKA + E+ + + + I+G + R A ++ ++M+ K
Sbjct: 322 CGEIEKAKRIFDEMPE----KQVASWNAMIHGYALNGNARAALDLFVTMMIE---EKPDE 374
Query: 216 TTYDALIENCSN 227
T A+I C++
Sbjct: 375 ITMLAVITACNH 386
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 58/251 (23%)
Query: 1 MLWRGLSPDEGTYSSLFN----------------------------AYFSLINAYCLGGE 32
M RG+SP+ TYSSL + +LI+AY G+
Sbjct: 74 MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGK 133
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
SKV +++ MI + P++ TY++LIYG C RV+EA+ +L M G +P
Sbjct: 134 LSKVDSVYKMMIQMSI-------DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG------------- 139
+ V+Y+ + +GF + +L +M + R + V +L++G
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQ-RGVAANTVSCNTLIKGYFQAGKIDLALGV 245
Query: 140 ---------LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
+ + +Y+ ++ A G++EKA + + +T ++ I+G+ K
Sbjct: 246 FGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCK 305
Query: 191 KARTREAKEIL 201
+EA ++
Sbjct: 306 ACMVKEAYDLF 316
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 111/283 (39%), Gaps = 47/283 (16%)
Query: 42 QMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVI 101
+M+ G+ PD VT S +L+ G+C +++A+ + M +MG+ D V I+I
Sbjct: 3 KMMKLGIEPDIVTAS-------SLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILI 55
Query: 102 SGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDE----DA------------ 145
C+ R A E+ M ++ I V Y SL+ GL DA
Sbjct: 56 DTLCKNRLVVPALEVLKRMKDRGI-SPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 114
Query: 146 ------YSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
+S+L++ Y +G + K + + + T S I GL R EA +
Sbjct: 115 NPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIK 174
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+L MIS C TY L +N FKS V + + D M
Sbjct: 175 MLDLMISKGCTPNV--VTYSTL----ANGFFKS-----------SRVDDGIKLLDDMPQR 217
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFS 302
+ N LI + + +D A ++ M G +P++ S
Sbjct: 218 GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRS 260
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 130/333 (39%), Gaps = 59/333 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYF---SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTG-- 55
M+ G+ PD T SSL N + S+ +A + G+ K+ D ++ ++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 56 ----------------SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNI 99
SP++VTY++LI G C GR+ +A L M ++P+ ++++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 100 VISGFC---RIREPGKAYELKMEMD-EKRILRMEEVVYESLMQGLSDED----------- 144
+I + ++ + Y++ ++M + + ++Y M DE
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 145 ------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
YS+L N + ++ L ++ G + +V+ + I G + + A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 199 EILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLH 258
+ M SN LI N +S ++ G G V +A + M
Sbjct: 244 GVFGYMTSN------------GLIPN-----IRSYNIVLAGLFANGEVEKALSRFEHMQK 286
Query: 259 GNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+ D Y +I C+ V +AY+++ ++
Sbjct: 287 TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKL 319
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 136/334 (40%), Gaps = 53/334 (15%)
Query: 7 SPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALI 66
SP + +S FN +LI+ Y G + +NL +M+ +GV D VT+N +I
Sbjct: 298 SPRKPRLTSTFN---TLIDLYGKAGRLNDAANLFSEMLKSGVPID-------TVTFNTMI 347
Query: 67 YGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVIS-------------GFCRIREPGKA 113
+ G + EA +L+ M E G+SPD +YNI++S + +IR+ G
Sbjct: 348 HTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLF 407
Query: 114 YE-------LKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYIL 165
+ L + K + +E V+ E + DE + +M Y+ +G + +A L
Sbjct: 408 PDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKAL 467
Query: 166 DREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENC 225
D LS S T + I+ ++K EA+ + N + Y+ +I+
Sbjct: 468 FERFQLDCVLS-STTLAAVIDVYAEKGLWVEAETVFYGK-RNMSGQRNDVLEYNVMIKAY 525
Query: 226 SNNEF-KSLVELVKGFRMRG-------------------LVSEAARAHDTMLHGNHKPDG 265
+ + + L KG + +G LV EA R ML KP
Sbjct: 526 GKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGC 585
Query: 266 GVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
Y +I + R + A ++Y M G P+
Sbjct: 586 KTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPN 619
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 138/370 (37%), Gaps = 74/370 (20%)
Query: 4 RGLSPDEGTYSSLFN----------------------------AYFSLINAYCLGGEFSK 35
+G PDE TY+SLF Y ++I +Y G S
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 36 VSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
+L++ M GV P+ V Y +LI G+ G VEEA+ R M E G+ + +
Sbjct: 604 AVDLYEAMEKTGV-------KPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHI 656
Query: 96 SYNIVISGFCRI---REPGKAYELKMEMDEK-----------------RILRMEEVVYES 135
+I + ++ E + Y+ KM+ E I+ E ++ +
Sbjct: 657 VLTSLIKAYSKVGCLEEARRVYD-KMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNA 715
Query: 136 LMQ-GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
L + G D +++++M Y G +++A + E+ G LS+ + + + + +
Sbjct: 716 LREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQL 775
Query: 195 REAKEILLSMISNS--CLSKTTHTTYDALIE------------NCSNNEFKSLVE---LV 237
E E+ M+ L T T L++ + NE K L
Sbjct: 776 SECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITA 835
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
F GL + A + + G + YN +I + ++D A Y RM G
Sbjct: 836 TLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLE 895
Query: 298 PHMFSVLALI 307
P + + L+
Sbjct: 896 PDIVTQAYLV 905
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 35/239 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PD T+++L AY + I + C + + +M+HN V P++ T
Sbjct: 490 GVKPDVVTFNTLAKAY-ARIGSTCTAEDM-----IIPRMLHNKV-------KPNVRTCGT 536
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
++ GYC G++EEAL M E+G+ P+ +N +I GF I + E+ M+E
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 125 I-------------------LRMEEVVYESLMQGLSDED--AYSSLMNDYLAQGDMEKAY 163
+ ++ E +Y +++G D D A+S L Y G+ EKA
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAE 656
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
+ ++ G V + I+G ++A ++ M LS TTY+ LI
Sbjct: 657 QILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNL-TTYETLI 714
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML G+ PD +A+ L Y GE K + +QM GV P++V
Sbjct: 627 MLEGGIDPD-------IHAFSILAKGYARAGEPEKAEQILNQMRKFGV-------RPNVV 672
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEM-GLSPDAVSYNIVISGFCRIREPGKAYELKME 119
Y +I G+C G +++A+ + + M + GLSP+ +Y +I GF ++P KA EL +
Sbjct: 673 IYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKD 732
Query: 120 MDEKRIL 126
M+ K ++
Sbjct: 733 MEGKNVV 739
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL PD + LFNA +INA G + + ++M +G P+ T+N
Sbjct: 384 GLKPD----TILFNA---IINASSESGNLDQAMKIFEKMKESGC-------KPTASTFNT 429
Query: 65 LIYGYCFLGRVEEALGILRGM--PEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
LI GY +G++EE+ +L M EM L P+ + NI++ +C R+ +A+ + +M
Sbjct: 430 LIKGYGKIGKLEESSRLLDMMLRDEM-LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS 488
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
+ + + V + +L + AY+ + + A+ DM I+ R + H+ T
Sbjct: 489 YGV-KPDVVTFNTLAK------AYARIGSTCTAE-DM----IIPR-MLHNKVKPNVRTCG 535
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRM 242
+NG ++ + EA M K + + N L+KGF
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRM-------KELGVHPNLFVFN----------SLIKGFLN 578
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP--HM 300
+ D M KPD ++ L+ ++ + +YT M+ G P H
Sbjct: 579 INDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHA 638
Query: 301 FSVLA 305
FS+LA
Sbjct: 639 FSILA 643
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
YN +I+G C G+ +EA I + GL PD +YN++I R G+A +L EM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEM- 71
Query: 122 EKRILRMEEVVYESLMQGLSDED-------------AYSSLMNDYLAQGDMEKAYILDRE 168
+R L + + Y S++ GL ++ +++L+N Y ++ L E
Sbjct: 72 IRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCE 131
Query: 169 IAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN 228
+ G ++ +T + I+G + A +I M+SN S + T D L + CS
Sbjct: 132 MYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSI-TFRDILPQLCSRK 190
Query: 229 EFKSLVELV 237
E + V ++
Sbjct: 191 ELRKAVAML 199
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L GL PD TY+ + FS + L+ +MI G++PD +
Sbjct: 40 LLISGLQPDVQTYNMMIR--FS---------SLGRAEKLYAEMIRRGLVPD-------TI 81
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN++I+G C ++ +A + S ++N +I+G+C+ L EM
Sbjct: 82 TYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVKDGMNLFCEM 132
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+ I+ ++ Y++L++ + GD A + +E+ +G S S+T
Sbjct: 133 YRRGIV--------------ANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 181 ESVFINGLSKKARTREAKEILL---SMISNS 208
+ L + R+A +LL SM+SN+
Sbjct: 179 FRDILPQLCSRKELRKAVAMLLQKSSMVSNN 209
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 34/203 (16%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ P+ T++ L N +C F +V + ++M G PD LVTYN
Sbjct: 231 GIHPNTYTFNIL-------TNVFCNDSNFREVDDFLEKMEEEGFEPD-------LVTYNT 276
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMD 121
L+ YC GR++EA + + M + PD V+Y +I G C R+RE + + ++
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 122 EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
K D +Y++L+ Y +G M+++ L E+ + + + T
Sbjct: 337 IK-----------------PDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTC 379
Query: 182 SVFINGLSKKARTREAKEILLSM 204
V + G ++ R A ++ +
Sbjct: 380 KVIVEGFVREGRLLSAVNFVVEL 402
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 122/309 (39%), Gaps = 47/309 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RG+ PD +Y++L I AYC G + L +M+ N V+PD T
Sbjct: 332 MVDRGIKPDCMSYNTL-------IYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTC----- 379
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
++ G+ GR+ A+ + + + + + +I C+ +P A L +
Sbjct: 380 --KVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRI 437
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
E+ + Y +L++ LS DA +E+A +L ++ + + ++ T
Sbjct: 438 IEEEGHEAKPETYNNLIESLSRCDA-------------IEEALVLKGKLKNQNQVLDAKT 484
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKG 239
I L + R REA+ ++ M + K AL+ C +F K
Sbjct: 485 YRALIGCLCRIGRNREAESLMAEMFDSE--VKPDSFICGALVYGYCKELDFD------KA 536
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK-NVDKAYNMYTRMVHYGFVP 298
R+ L + R D P+ YN L+ C KA + RM GFVP
Sbjct: 537 ERLLSLFAMEFRIFD--------PES--YNSLVKAVCETGCGYKKALELQERMQRLGFVP 586
Query: 299 HMFSVLALI 307
+ + LI
Sbjct: 587 NRLTCKYLI 595
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 104/230 (45%), Gaps = 41/230 (17%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
V++N+++ G G + +A + MP+ D +S+N ++ G+ R RE KA+EL +
Sbjct: 186 VSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEK 241
Query: 120 MDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
M E+ + ++S+++ Y GDME A ++ ++ V
Sbjct: 242 MPERNTV------------------SWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVV 281
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T ++ I G ++K +EA ++ M+++ +DA +++ ++
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASG-------LKFDA----------AAVISILAA 324
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYT 289
GL+S R H + N + V N L+ + +C N+ KA++++
Sbjct: 325 CTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN 374
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 124/296 (41%), Gaps = 31/296 (10%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL+P TY++L I Y + G+ + S L D M+ G V P++ T+N
Sbjct: 145 GLNPTTSTYNTL-------IKGYGIAGKPERSSELLDLMLEEG----NVDVGPNIRTFNV 193
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ +C +VEEA +++ M E G+ PD V+YN + + + + G+ + E+ EK
Sbjct: 194 LVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV---QKGETVRAESEVVEKM 250
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
+++ E+ G+ ++ Y +G + R + + V +
Sbjct: 251 VMK-EKAKPNGRTCGI--------VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSL 301
Query: 185 INGLSKKARTREAKEILLSMISNS-------CLSKTTHTTYDALIENCS-NNEFKSLVEL 236
ING + E+ L+++ S ++ L++ C+ + + +
Sbjct: 302 INGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTV 361
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
+ + G + +AA+ M+ KPD Y+ L + R K KA + ++
Sbjct: 362 MNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 417
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 132/313 (42%), Gaps = 41/313 (13%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ PD TY+++ Y GE + +++ V+ + P+ T
Sbjct: 218 GVRPDTVTYNTIATCYVQ-------KGETVRA---ESEVVEKMVMKE--KAKPNGRTCGI 265
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM---- 120
++ GYC GRV + L +R M EM + + V +N +I+GF + + E+ + +
Sbjct: 266 VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMS 325
Query: 121 --DEKRILRMEEVVYE--SLMQGL---SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDG 173
+E ++ +++ + +LM+ +D YS++MN + + G MEKA + +E+ G
Sbjct: 326 FNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAG 385
Query: 174 YLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSL 233
++ S+ G + ++A+E+L ++I S + TT
Sbjct: 386 VKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTT---------------- 429
Query: 234 VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
++ G+ G + +A R + M P+ + L+ + K KA + M
Sbjct: 430 --VISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRG 487
Query: 294 YGFVPHMFSVLAL 306
G P + L L
Sbjct: 488 CGVKPENSTFLLL 500
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 32/198 (16%)
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
++TY+ ++ + G +E+A + + M + G+ PDA +Y+I+ G+ R +EP KA EL
Sbjct: 355 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL-- 412
Query: 119 EMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+E ++ ES + ++++++ + + G M+ A + ++ G
Sbjct: 413 ---------LETLIVESRPNVV----IFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 459
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
T + G + + +A+E+L M C K ++T+ L E
Sbjct: 460 KTFETLMWGYLEVKQPWKAEEVLQMM--RGCGVKPENSTFLLLAE--------------- 502
Query: 239 GFRMRGLVSEAARAHDTM 256
+R+ GL E+ +A + +
Sbjct: 503 AWRVAGLTDESNKAINAL 520
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 132/329 (40%), Gaps = 55/329 (16%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y +L+ A + ++ +S++ ++ +G D + +NA+I + G +E+A
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIF-------FNAVINAFSESGNMEDA 134
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL---------------------- 116
+ L M E+GL+P +YN +I G+ +P ++ EL
Sbjct: 135 VQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 117 -KMEMDEKRILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKA--YILDREIAHD 172
+ +K++ EVV + G+ D Y+++ Y+ +G+ +A ++++ + +
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254
Query: 173 GYLSESVTESVFINGLSKKARTR--------------EAKEILLSMISNSCLSKTTHTTY 218
T + + G ++ R R EA ++ + + N +
Sbjct: 255 KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGI 314
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
D + F VELV +M+ + M N K D Y+ ++
Sbjct: 315 DEVTLTLLLMSFNEEVELVGNQKMK------VQVLTLMKECNVKADVITYSTVMNAWSSA 368
Query: 279 KNVDKAYNMYTRMVHYGFVP--HMFSVLA 305
++KA ++ MV G P H +S+LA
Sbjct: 369 GYMEKAAQVFKEMVKAGVKPDAHAYSILA 397
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 115/302 (38%), Gaps = 75/302 (24%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
+ P+ T++S+ +++ GE V + +M + V SP++ +YN L
Sbjct: 241 IKPNATTFNSMMVSFYR-------EGETEMVERIWREM------EEEVGCSPNVYSYNVL 287
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
+ YC G + EA + M G+ D V+YN +I G C E KA EL +M K I
Sbjct: 288 MEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGI 347
Query: 126 LRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFI 185
+ YE L+ G Y GD++ ++ RE+ G+ ++ +T +
Sbjct: 348 -ECTCLTYEHLVNG-------------YCKAGDVDSGLVVYREMKRKGFEADGLTIEALV 393
Query: 186 NGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGL 245
GL C + + + +VE +
Sbjct: 394 EGL------------------------------------CDDRDGQRVVEAAD------I 411
Query: 246 VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLA 305
V +A R + M + P Y L+ C +D+A N+ MV GF P + A
Sbjct: 412 VKDAVR--EAMFY----PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRA 465
Query: 306 LI 307
I
Sbjct: 466 FI 467
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 86/216 (39%), Gaps = 43/216 (19%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSP---- 57
+WR + + G +++ +Y L+ AYC G S+ + ++M GV+ D V +
Sbjct: 267 IWREMEEEVGCSPNVY-SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGG 325
Query: 58 ------------------------SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPD 93
+ +TY L+ GYC G V+ L + R M G D
Sbjct: 326 LCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEAD 385
Query: 94 AVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL--SDEDAYSSLMN 151
++ ++ G C R D +R++ ++V +++ + + + Y L+
Sbjct: 386 GLTIEALVEGLCDDR------------DGQRVVEAADIVKDAVREAMFYPSRNCYELLVK 433
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFING 187
G M++A + E+ G+ T FI+G
Sbjct: 434 RLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 127/309 (41%), Gaps = 37/309 (11%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
D Y+ F+A L G + L +M G++PD ++ Y LI G
Sbjct: 387 DRVCYNVAFDALSKL-------GRVEEAFELLQEMKDRGIVPD-------VINYTTLIDG 432
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
YC G+V +AL ++ M G+SPD ++YN+++SG R + E+ M + +
Sbjct: 433 YCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGP-KP 491
Query: 129 EEVVYESLMQGL-------SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
V +++GL ED +SSL E+ ++ GY +++
Sbjct: 492 NAVTNSVIIEGLCFARKVKEAEDFFSSL----------EQKCPENKASFVKGYCEAGLSK 541
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN--EFKSLV-ELVK 238
+ + + R K + + + + C+ +D L + + +S+ +++
Sbjct: 542 KAYKAFVRLEYPLR--KSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIG 599
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
F V EA DTM+ PD Y +I +CR + KA +++ M G P
Sbjct: 600 AFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKP 659
Query: 299 HMFSVLALI 307
+ + L+
Sbjct: 660 DVVTYTVLL 668
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 130/339 (38%), Gaps = 75/339 (22%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A ++I+ YC + D+M+ G+ + V + ++ YC + EA
Sbjct: 320 ACLAVIDRYCKNMNLPEALGFLDKMLGKGL-------KVNCVIVSLILQCYCKMDMCLEA 372
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L + +M + D V YN+ ++ +A+EL EM ++ I
Sbjct: 373 LEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGI------------- 419
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ D Y++L++ Y QG + A L E+ +G + +T +V ++GL++ E
Sbjct: 420 -VPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVL 478
Query: 199 EILLSM---------ISNS------CLSKTTHTTYD---ALIENCSNNEFKSLVELVKGF 240
EI M ++NS C ++ D +L + C N+ VKG+
Sbjct: 479 EIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENK----ASFVKGY 534
Query: 241 RMRGLVSEA-----------------------------ARAHDTMLHGNH---KPDGGVY 268
GL +A +AHD + + +P +
Sbjct: 535 CEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMC 594
Query: 269 NFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+I C+ NV +A ++ MV G +P +F+ +I
Sbjct: 595 GKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMI 633
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
+I A+C + L D M+ G++PD L TY +I+ YC L +++A +
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERGLIPD-------LFTYTIMIHTYCRLNELQKAESL 648
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIR-EPGKAYELKMEMDEKRILRMEEVVYESLMQGL 140
M + G+ PD V+Y +++ + ++ E + ++ E+ ++ + EV+ E G+
Sbjct: 649 FEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKR---KASEVLREFSAAGI 705
Query: 141 S-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKK 191
D Y+ L++ ++E+A L + G + V + I+ +K
Sbjct: 706 GLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRK 757
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ RGL PD TY+ + I+ YC E K +L + M G+ PD VT + L
Sbjct: 617 MVERGLIPDLFTYTIM-------IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLD 669
Query: 61 TYNALIYGYCFLGRVEEALG------ILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAY 114
Y L + V+ +G +LR G+ D V Y ++I C++ +A
Sbjct: 670 RYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAA 729
Query: 115 ELKMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAH 171
EL M + GL D AY++L++ Y +G ++ A L E++
Sbjct: 730 ELFDRMID---------------SGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSK 772
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 102/266 (38%), Gaps = 55/266 (20%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML G SPD TY+ L + L G+ + L D+M +G SP
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRL-------GKMDRFDRLFDEMARDGF-------SPDSY 290
Query: 61 TYNALIYGYCFLGRVEE---ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
TYN L++ LG+ + AL L M E+G+ P + Y +I G R G K
Sbjct: 291 TYNILLH---ILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR---AGNLEACK 344
Query: 118 MEMDE--KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+DE K R + V Y ++ G Y+ G+++KA + RE+ G L
Sbjct: 345 YFLDEMVKAGCRPDVVCYTVMITG-------------YVVSGELDKAKEMFREMTVKGQL 391
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
T + I GL REA +L M S C N F
Sbjct: 392 PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGC-----------------NPNFVVYST 434
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNH 261
LV R G +SEA + M+ H
Sbjct: 435 LVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 117/290 (40%), Gaps = 42/290 (14%)
Query: 13 YSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFL 72
Y ++Y +++N+ ++ + ++ QM+ +G SP ++TYN L++ L
Sbjct: 215 YRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGF-------SPDVLTYNILLWTNYRL 267
Query: 73 GRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVV 132
G+++ + M G SPD+ +YNI++ + +P A M E I +
Sbjct: 268 GKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGI-DPSVLH 326
Query: 133 YESLMQGLSDEDAYSSLMNDYLAQGDMEKA-YILDREIAHDGYLSESVTESVFINGLSKK 191
Y +L+ GLS G++E Y LD E+ G + V +V I G
Sbjct: 327 YTTLIDGLS-------------RAGNLEACKYFLD-EMVKAGCRPDVVCYTVMITGYVVS 372
Query: 192 ARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGLVSEAA 250
+AKE+ M L TY+++I C EF+ L+K RG
Sbjct: 373 GELDKAKEMFREMTVKGQLPNVF--TYNSMIRGLCMAGEFREACWLLKEMESRGC----- 425
Query: 251 RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
P+ VY+ L+ + + +A + MV G H+
Sbjct: 426 -----------NPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHL 464
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 121/311 (38%), Gaps = 51/311 (16%)
Query: 2 LWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVT 61
LW G ++ + N+Y L+ + GE+ + L D+M+ +G F T + T
Sbjct: 137 LWSG---EQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDG----FPTTAR---T 186
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
+N LI G ++A+ P SYN +++ + K Y+L
Sbjct: 187 FNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGV----KQYKL----- 237
Query: 122 EKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+E V + L G S D Y+ L+ G M++ L E+A DG+ +S T
Sbjct: 238 ------IEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYT 291
Query: 181 ESVFINGLSKKARTREAKEILLSM----ISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
++ ++ L K + A L M I S L TT L
Sbjct: 292 YNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTT---------------------L 330
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+ G G + D M+ +PD Y +I + +DKA M+ M G
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 297 VPHMFSVLALI 307
+P++F+ ++I
Sbjct: 391 LPNVFTYNSMI 401
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 116/288 (40%), Gaps = 45/288 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+ +I+ Y G+ + + D M G +P ++ T+N LI G ++E+A
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP-------TVHTFNGLINGLVEKRQMEKA 643
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ IL M G+S + +Y ++ G+ + + GKA+E R++ +
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY--------FTRLQN-------E 688
Query: 139 GLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
GL D Y +L+ G M+ A + +E++ S ++ I+G +++ EA
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNN--------------------EFKSLVELV 237
+++ M K TY + I CS K+ L+
Sbjct: 749 ADLIQQMKKEGV--KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAY 285
KG+ L +A ++ M KPD VY+ L+ ++ +AY
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 854
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 130/320 (40%), Gaps = 46/320 (14%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
+EG +L Y +IN + +++ + + M+ G+ PD ++ YN +I
Sbjct: 512 EEGVKHNL-KTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD-------VILYNNIISA 563
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR---IREPGKAYELKME------ 119
+C +G ++ A+ ++ M ++ P ++ +I G+ + +R + +++
Sbjct: 564 FCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPT 623
Query: 120 -----------MDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDR 167
++++++ + E++ E + G+S +E Y+ +M Y + GD KA+
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFT 683
Query: 168 EIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSN 227
+ ++G + T + K R + A + M + N
Sbjct: 684 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR----------------NIPR 727
Query: 228 NEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNM 287
N F + L+ G+ RG V EAA M KPD Y I + ++++A
Sbjct: 728 NSFVYNI-LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT 786
Query: 288 YTRMVHYGFVPHMFSVLALI 307
M G P++ + LI
Sbjct: 787 IEEMEALGVKPNIKTYTTLI 806
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 117/253 (46%), Gaps = 33/253 (13%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P++VTY LI Y +G++ +AL + R M E G+ + +Y+++I+GF ++++ A+
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+ E++V E + D Y+++++ + G+M++A +E+ +
Sbjct: 541 V-----------FEDMVKEGMK---PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLV 234
+ T I+G +K R + E+ M C+ T H T++ LI + + V
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP-TVH-TFNGLINGLVEKRQMEKAV 644
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
E++ + G+ +A H Y ++ + + KA+ +TR+ +
Sbjct: 645 EILDEMTLAGV---SANEH-------------TYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 295 GFVPHMFSVLALI 307
G +F+ AL+
Sbjct: 689 GLDVDIFTYEALL 701
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 124/309 (40%), Gaps = 51/309 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
++ Y G+ + ++M G+ +P+ Y +LI+ Y ++EAL +
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGI-------TPTSRIYTSLIHAYAVGRDMDEALSCV 367
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE-KRILRM------EEVVY-- 133
R M E G+ V+Y++++ GF + G A DE KRI + +++Y
Sbjct: 368 RKMKEEGIEMSLVTYSVIVGGFSK---AGHAEAADYWFDEAKRIHKTLNASIYGKIIYAH 424
Query: 134 ---------ESLMQGLSDE--DA----YSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
E+L++ + +E DA Y ++M+ Y D +K ++ + + G+
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
VT IN +K + +A E+ M K TY +I N F L +
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGV--KHNLKTYSMMI-----NGFVKLKDWAN 537
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
F + + M+ KPD +YN +I C N+D+A M P
Sbjct: 538 AFAV----------FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Query: 299 HMFSVLALI 307
+ + +I
Sbjct: 588 TTRTFMPII 596
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 28/197 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M G+S +E TY+ + Y S+ G+ K ++ + G+ D +
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASV-------GDTGKAFEYFTRLQNEGLDVD-------IF 695
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY AL+ C GR++ AL + + M + ++ YNI+I G+ R + +A +L +M
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++ + D Y+S ++ GDM +A E+ G T
Sbjct: 756 KKEGV--------------KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKT 801
Query: 181 ESVFINGLSKKARTREA 197
+ I G ++ + +A
Sbjct: 802 YTTLIKGWARASLPEKA 818
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 22/150 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD TY++L I+ + +F V + +QM +G+ P++ TY A
Sbjct: 576 GKKPDSITYNTL-------ISFFGKHKDFESVERMMEQMREDGL-------DPTVTTYGA 621
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGL----SPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+I YC +G ++EAL + + +MGL +P+ V YNI+I+ F ++ G+A LK EM
Sbjct: 622 VIDAYCSVGELDEALKLFK---DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLM 150
K ++R Y +L + L+++ +L+
Sbjct: 679 KMK-MVRPNVETYNALFKCLNEKTQGETLL 707
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 120/311 (38%), Gaps = 50/311 (16%)
Query: 4 RGLSPDEGTYSSLFNAYF-SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
RG D+G + +F +LI+ C G + L +M P+ VTY
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE------RCVPNAVTY 409
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N LI GYC G++E A ++ M E + P+ V+ N ++ G CR A M+M E
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM-E 468
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
K ++ V Y +L+ A S+ N +EKA ++ G ++
Sbjct: 469 KEGVKGNVVTYMTLIH------ACCSVSN-------VEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN------CSNNEFKSLVEL 236
I+GL + R +A ++ + K + D L N C N + + E+
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKL-------KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+ G KPD YN LI + K+ + M +M G
Sbjct: 569 LTDMEKEG----------------KKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 297 VPHMFSVLALI 307
P + + A+I
Sbjct: 613 DPTVTTYGAVI 623
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 122/317 (38%), Gaps = 51/317 (16%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
FNA S CLG +S ++D ++ D V P +VT LI C RV+
Sbjct: 297 FNALLS-----CLGRNMD-ISRMNDLVLKM----DEVKIRPDVVTLGILINTLCKSRRVD 346
Query: 77 EALGILRGM----PEMG--LSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEE 130
EAL + M + G + D++ +N +I G C++ +A EL + M ++EE
Sbjct: 347 EALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM------KLEE 400
Query: 131 VVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
+ + + Y+ L++ Y G +E A + + D VT + + G+ +
Sbjct: 401 -------RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIENC---SNNE-----FKSLVE------- 235
A + M K TY LI C SN E ++ ++E
Sbjct: 454 HHGLNMAVVFFMDMEKEGV--KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Query: 236 -----LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTR 290
L+ G +A R + + G D YN LI C N +K Y M T
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 291 MVHYGFVPHMFSVLALI 307
M G P + LI
Sbjct: 572 MEKEGKKPDSITYNTLI 588
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 22/150 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD TY++L I+ + +F V + +QM +G+ P++ TY A
Sbjct: 576 GKKPDSITYNTL-------ISFFGKHKDFESVERMMEQMREDGL-------DPTVTTYGA 621
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGL----SPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+I YC +G ++EAL + + +MGL +P+ V YNI+I+ F ++ G+A LK EM
Sbjct: 622 VIDAYCSVGELDEALKLFK---DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLM 150
K ++R Y +L + L+++ +L+
Sbjct: 679 KMK-MVRPNVETYNALFKCLNEKTQGETLL 707
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 140/361 (38%), Gaps = 81/361 (22%)
Query: 4 RGLSPDEGTYSSLFNAYF-SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
RG D+G + +F +LI+ C G + L +M +P+ VTY
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE------RCAPNAVTY 409
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD- 121
N LI GYC G++E A ++ M E + P+ V+ N ++ G CR A M+M+
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 122 -----------------------EKRILRMEEV----------VYESLMQGL----SDED 144
EK + E++ +Y +L+ GL D D
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 145 ------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFIN 186
AY+ L+ + + + EK Y + ++ +G +S+T + I+
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 187 GLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRGL 245
K + E+ E ++ + L T TTY A+I+ CS E ++L K
Sbjct: 590 FFGKH-KDFESVERMMEQMREDGLDPTV-TTYGAVIDAYCSVGELDEALKLFK------- 640
Query: 246 VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLA 305
D LH P+ +YN LI + N +A ++ M P++ + A
Sbjct: 641 --------DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 306 L 306
L
Sbjct: 693 L 693
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 22/150 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G PD TY++L I+ + +F V + +QM +G+ P++ TY A
Sbjct: 576 GKKPDSITYNTL-------ISFFGKHKDFESVERMMEQMREDGL-------DPTVTTYGA 621
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGL----SPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+I YC +G ++EAL + + +MGL +P+ V YNI+I+ F ++ G+A LK EM
Sbjct: 622 VIDAYCSVGELDEALKLFK---DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLM 150
K ++R Y +L + L+++ +L+
Sbjct: 679 KMK-MVRPNVETYNALFKCLNEKTQGETLL 707
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 120/311 (38%), Gaps = 50/311 (16%)
Query: 4 RGLSPDEGTYSSLFNAYF-SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTY 62
RG D+G + +F +LI+ C G + L +M P+ VTY
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE------RCVPNAVTY 409
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N LI GYC G++E A ++ M E + P+ V+ N ++ G CR A M+M E
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM-E 468
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
K ++ V Y +L+ A S+ N +EKA ++ G ++
Sbjct: 469 KEGVKGNVVTYMTLIH------ACCSVSN-------VEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN------CSNNEFKSLVEL 236
I+GL + R +A ++ + K + D L N C N + + E+
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKL-------KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
+ G KPD YN LI + K+ + M +M G
Sbjct: 569 LTDMEKEG----------------KKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 297 VPHMFSVLALI 307
P + + A+I
Sbjct: 613 DPTVTTYGAVI 623
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 122/317 (38%), Gaps = 51/317 (16%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
FNA S CLG +S ++D ++ D V P +VT LI C RV+
Sbjct: 297 FNALLS-----CLGRNMD-ISRMNDLVLKM----DEVKIRPDVVTLGILINTLCKSRRVD 346
Query: 77 EALGILRGM----PEMG--LSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEE 130
EAL + M + G + D++ +N +I G C++ +A EL + M ++EE
Sbjct: 347 EALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM------KLEE 400
Query: 131 VVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSK 190
+ + + Y+ L++ Y G +E A + + D VT + + G+ +
Sbjct: 401 -------RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 191 KARTREAKEILLSMISNSCLSKTTHTTYDALIENC---SNNE-----FKSLVE------- 235
A + M K TY LI C SN E ++ ++E
Sbjct: 454 HHGLNMAVVFFMDMEKEGV--KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Query: 236 -----LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTR 290
L+ G +A R + + G D YN LI C N +K Y M T
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 291 MVHYGFVPHMFSVLALI 307
M G P + LI
Sbjct: 572 MEKEGKKPDSITYNTLI 588
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y ++INA G+ K L+ M PD + N +I CF R+ EA
Sbjct: 284 SYGTMINALTKKGKLGKAMELYRAMWDTRRNPD-------VKICNNVIDALCFKKRIPEA 336
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK------------RIL 126
L + R + E G P+ V+YN ++ C+IR K +EL EM+ K +L
Sbjct: 337 LEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL 396
Query: 127 RMEE------VVYESLMQGLSD--EDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+ + +V E + + + D Y+ + Y+ EK + E+ G +
Sbjct: 397 KYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQ 456
Query: 179 VTESVFINGLSKKARTREAKEILLSMIS 206
T ++ I+GL K + EA M+S
Sbjct: 457 RTYTIRIHGLHTKGKIGEALSYFQEMMS 484
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 125/318 (39%), Gaps = 51/318 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L+ ++C G + + +M G+ + + YN L+ Y +EE G+
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSN-------TIVYNTLMDAYNKSNHIEEVEGLF 402
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE-----------------KRI 125
M + GL P A +YNI++ + R +P L EM++ R
Sbjct: 403 TEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRT 462
Query: 126 LRMEEVVYESLMQ----GLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
+M ++ ++ ++ GL +Y++L++ Y G EKAY E+ +G T
Sbjct: 463 KKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVET 522
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN----EFKSLVE- 235
+ ++ + T + EI M+ K T TY+ L++ + E + +V
Sbjct: 523 YTSVLDAFRRSGDTGKLMEIWKLMLREKI--KGTRITYNTLLDGFAKQGLYIEARDVVSE 580
Query: 236 ---------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKN 280
L+ + G ++ + M N KPD Y+ +I R ++
Sbjct: 581 FSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRD 640
Query: 281 VDKAYNMYTRMVHYGFVP 298
+A+ + MV G VP
Sbjct: 641 FKRAFFYHKMMVKSGQVP 658
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 36/205 (17%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHD---QMIHNGVLPDFVTGSPSLV 60
+G+ D Y+++F+A G+ ++S++HD +M +G SP +
Sbjct: 436 KGVVTDTMMYNTVFSAL----------GKLKQISHIHDLFEKMKKDG-------PSPDIF 478
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYN LI + +G V+EA+ I + PD +SYN +I+ + + +A+ EM
Sbjct: 479 TYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
EK GL+ D YS+LM + +E AY L E+ G V
Sbjct: 539 QEK---------------GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIV 583
Query: 180 TESVFINGLSKKARTREAKEILLSM 204
T ++ ++ L K RT EA ++ M
Sbjct: 584 TYNILLDCLEKNGRTAEAVDLYSKM 608
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 100/256 (39%), Gaps = 42/256 (16%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
++Y S++ + C G+ + + ++ GV+ D + YN + L ++
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTD-------TMMYNTVFSALGKLKQISH 460
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
+ M + G SPD +YNI+I+ F R+ E +A ++E L
Sbjct: 461 IHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAIN----------------IFEELE 504
Query: 138 QGLSDED--AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTR 195
+ D +Y+SL+N GD+++A++ +E+ G + VT S + K R
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 196 EAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDT 255
A + M+ C + TY+ L++ N G +EA +
Sbjct: 565 MAYSLFEEMLVKGC--QPNIVTYNILLDCLEKN---------------GRTAEAVDLYSK 607
Query: 256 MLHGNHKPDGGVYNFL 271
M PD Y L
Sbjct: 608 MKQQGLTPDSITYTVL 623
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 71/135 (52%), Gaps = 13/135 (9%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RG++P + +Y++L + A+ + G+ + + D+M+++ + L+
Sbjct: 549 MRTRGIAPTKISYTTL-------MKAFAMSGQPKLANRVFDEMMNDPRV------KVDLI 595
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+N L+ GYC LG +E+A ++ M E G P+ +Y + +G + R+PG A L E+
Sbjct: 596 AWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEI 655
Query: 121 DEKRILRMEEVVYES 135
E+ ++ +E +S
Sbjct: 656 KERCAVKKKEAPSDS 670
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 39/235 (16%)
Query: 90 LSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAY 146
+PD+ Y ++ G+ R+ + + E D++ DE Y
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDR--------------NSHPDEVTY 455
Query: 147 SSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMIS 206
+++++ ++ G M++A + E+A G + +T +V + G K+ + A+++L M
Sbjct: 456 TTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTE 515
Query: 207 NSCLSKTTHTTYDALIENCS-----------NNEFK---------SLVELVKGFRMRGLV 246
++ + +Y+ +I+ C NE + S L+K F M G
Sbjct: 516 DAGIEPDV-VSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQP 574
Query: 247 SEAARAHDTMLHGNH-KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
A R D M++ K D +N L+ +CR ++ A + +RM GF P++
Sbjct: 575 KLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 125/326 (38%), Gaps = 40/326 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
+L + +PD Y++L Y G + + + + M D P V
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMK-------NGRVADTARMLEAMRRQ----DDRNSHPDEV 453
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY ++ + G ++ A +L M MG+ + ++YN+++ G+C+ + +A +L EM
Sbjct: 454 TYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM 513
Query: 121 DEKRILRMEEVVYESLMQG--LSDEDA--------------------YSSLMNDYLAQGD 158
E + + V Y ++ G L D+ A Y++LM + G
Sbjct: 514 TEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQ 573
Query: 159 MEKAYILDREIAHDGYLS-ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT 217
+ A + E+ +D + + + ++ + G + +A+ ++ M N T
Sbjct: 574 PKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV--AT 631
Query: 218 YDALIENCSN-NEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH---KPDGGVYNFLIV 273
Y +L S + + L K + R V + D+ KPD G+ + L
Sbjct: 632 YGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLAD 691
Query: 274 EHCRCKNVDKAYNMYTRMVHYGFVPH 299
R KA + M G P+
Sbjct: 692 ICVRAAFFKKALEIIACMEENGIPPN 717
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 34/236 (14%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
S+ T+ LI Y G EA+ M + G PD ++++IVIS R R +A
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
+ ++ + +VY +L++G + G++ +A + +E+ G
Sbjct: 245 DSLKDR--FEPDVIVYTNLVRG-------------WCRAGEISEAEKVFKEMKLAGIEPN 289
Query: 178 SVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL- 236
T S+ I+ L + + A ++ M+ + C F +L+ +
Sbjct: 290 VYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAI--------------TFNNLMRVH 335
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
VK G + + ++ M +PD YNFLI HCR +N++ A + M+
Sbjct: 336 VKA----GRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMI 387
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 96/237 (40%), Gaps = 35/237 (14%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P ++ Y L+ G+C G + EA + + M G+ P+ +Y+IVI CR + +A+++
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 117 KMEMDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+M L G + + +++LM ++ G EK + ++ G
Sbjct: 313 FADM---------------LDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCE 357
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSC-LSKTTHTTYDALIENCSNNEFKSLV 234
+++T + I + A ++L +MI C ++ +T T IE +
Sbjct: 358 PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRD------- 410
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
V+ A R + M+ +P+ YN L+ K+ D M M
Sbjct: 411 -----------VNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEM 456
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ P+ TYS + I+A C G+ S+ ++ M+ +G +P+ +T+N
Sbjct: 285 GIEPNVYTYSIV-------IDALCRCGQISRAHDVFADMLDSGC-------APNAITFNN 330
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR 106
L+ + GR E+ L + M ++G PD ++YN +I CR
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 126/307 (41%), Gaps = 51/307 (16%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPD-FVTGSPSLVTY 62
RG+SPDE TYS L +AY +NA G + + +M V P+ FV +
Sbjct: 368 RGVSPDEHTYSLLIDAY---VNA----GRWESARIVLKEMEAGDVQPNSFV--------F 412
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
+ L+ G+ G ++ +L+ M +G+ PD YN+VI F GK L M
Sbjct: 413 SRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF------GKFNCLDHAMTT 466
Query: 123 KRILRMEEVVYESLMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
RM L +G+ D +++L++ + G A + + G L + T
Sbjct: 467 --FDRM-------LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSK-TTHTTYDALIENCSNNEFKSLVELVKGF 240
++ IN + R + K +L M S L THTT LV +
Sbjct: 518 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTT------------------LVDVY 559
Query: 241 RMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHM 300
G ++A + M KP +YN LI + + ++A N + M G P +
Sbjct: 560 GKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSL 619
Query: 301 FSVLALI 307
++ +LI
Sbjct: 620 LALNSLI 626
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 113/313 (36%), Gaps = 49/313 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +LI A + K NL +M +G DFV Y+ +I +++
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVN-------YSLVIQSLTRSNKIDSV 251
Query: 79 LGILRGMPEM---GLSPDAVSYNIVISGFCRIREPGKAYEL------------------- 116
+ +LR E+ L D N +I GF + +P KA +L
Sbjct: 252 M-LLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSI 310
Query: 117 -KMEMDEKRILRMEEVVYESLMQGLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
D R L E + E G+ AY++L+ Y+ G ++ A + E+ G
Sbjct: 311 ISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGV 370
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLV 234
+ T S+ I+ R A+ +L M + + N F
Sbjct: 371 SPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG----------------DVQPNSF-VFS 413
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
L+ GFR RG + + M KPD YN +I + +D A + RM+
Sbjct: 414 RLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 473
Query: 295 GFVPHMFSVLALI 307
G P + LI
Sbjct: 474 GIEPDRVTWNTLI 486
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 76/205 (37%), Gaps = 57/205 (27%)
Query: 1 MLWRGLSPDEGTYSSLFN----------------------------AYFSLINAYCLGGE 32
ML G+ PD T+++L + Y +IN+Y
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGS----------------------------PSLVTYNA 64
+ + L +M G+LP+ VT + PS YNA
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
LI Y G E+A+ R M GL P ++ N +I+ F R +A+ + M E
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSL 149
+ + + V Y +LM+ L D + +
Sbjct: 650 V-KPDVVTYTTLMKALIRVDKFQKV 673
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 51/275 (18%)
Query: 57 PSLVTYNALIYGY---CFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKA 113
P + +Y L+ G+ L RV+E + R M + G PD V+Y I+I+ C+ ++ +A
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDE---VNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
Query: 114 YELKMEMDEKRILRMEEVVYESLMQGLSDE----DA------------------YSSLMN 151
EM E+R + ++ SL+ GL E DA Y++L+
Sbjct: 287 IRFFNEM-EQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVG 345
Query: 152 DYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLS 211
Y ME AY E+ G + T + ++ L + R++EA E+ +M SC
Sbjct: 346 AYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SC-- 400
Query: 212 KTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFL 271
+ T +TY+ ++ N E + A + D M P +++ L
Sbjct: 401 EPTVSTYEIMVRMFCNKE---------------RLDMAIKIWDEMKGKGVLPGMHMFSSL 445
Query: 272 IVEHCRCKNVDKAYNMYTRMVHYGFVP--HMFSVL 304
I C +D+A + M+ G P HMFS L
Sbjct: 446 ITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 124/326 (38%), Gaps = 52/326 (15%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +LI + +F + +L D M +L S T+ + Y +V+EA+
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLL--------SKETFALISRRYARARKVKEAI 182
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR--------------- 124
G M E G ++ +N ++ + R G A ++ +M +KR
Sbjct: 183 GAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGW 242
Query: 125 -----ILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+LR++EV E +G D AY ++N + E+A E+
Sbjct: 243 GQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSP 302
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI-ENCSNNEFKSLVELV 237
INGL + + +A E S S TY+AL+ C + + + V
Sbjct: 303 HIFCSLINGLGSEKKLNDALEFFER--SKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 360
Query: 238 KGFRMRGLVSEAARAHDTMLHG-----------------NHKPDGGVYNFLIVEHCRCKN 280
R++G V AR +D +LH + +P Y ++ C +
Sbjct: 361 DEMRLKG-VGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKER 419
Query: 281 VDKAYNMYTRMVHYGFVP--HMFSVL 304
+D A ++ M G +P HMFS L
Sbjct: 420 LDMAIKIWDEMKGKGVLPGMHMFSSL 445
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 15/140 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ G+S +S L + +F GE K +L ++MI G SP+LV
Sbjct: 238 MICSGISVSVNVWSMLVSGFFR-------SGEPQKAVDLFNKMIQIGC-------SPNLV 283
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY +LI G+ LG V+EA +L + GL+PD V N++I + R+ +A ++ +
Sbjct: 284 TYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSL 343
Query: 121 DEKRILRMEEVVYESLMQGL 140
EKR L ++ + S++ L
Sbjct: 344 -EKRKLVPDQYTFASILSSL 362
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y S+I+ Y GG +KV L D+M + PD YNA+++ V EA
Sbjct: 304 SYSSMISCYSKGGSLNKVLKLFDRMKKECIEPD-------RKVYNAVVHALAKASFVSEA 356
Query: 79 LGILRGMPE-MGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK-------------R 124
+++ M E G+ P+ V+YN +I C+ R+ +A ++ EM EK R
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416
Query: 125 ILRMEEVVYESL--MQGLSDE---DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
ILR E V+E L M+ + E + Y L+ D + +L E+ +
Sbjct: 417 ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLS 476
Query: 180 TESVFINGLSKKARTREA 197
+ V I+GL + EA
Sbjct: 477 SYIVMIHGLFLNGKIEEA 494
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 31/252 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+++TY L+ G+C + + EA I M + GL PD V++N+++ G R + A +
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 354
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L M K + +Y+ ++ D+ Q ME A ++ G
Sbjct: 355 LFHVMKSK--------------GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
++ + I G + + E+L M TY+ALI+ +N +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG--HPPDGKTYNALIKLMANQK------ 452
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
+ R ++ M+ +P +N ++ + +N + ++ M+ G
Sbjct: 453 ---------MPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 503
Query: 296 FVPHMFSVLALI 307
P S LI
Sbjct: 504 ICPDDNSYTVLI 515
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 112/306 (36%), Gaps = 58/306 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y L+N +C + + + + MI +G+ PD +V +N ++ G + +A
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPD-------IVAHNVMLEGLLRSMKKSDA 352
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ + M G P+ SY I+I FC K E I +++V L
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFC-----------KQSSMETAIEYFDDMVDSGLQ- 400
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
D Y+ L+ + Q ++ Y L +E+ G+ + T + I ++ +
Sbjct: 401 --PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 458
Query: 199 EILLSMISNSCLSKTTHT-------------------TYDALIENCSNNEFKSLVELVKG 239
I MI N + + HT +D +I+ + S L++G
Sbjct: 459 RIYNKMIQNE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 517
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
G EA R + ML D G+ LI YN + H G P
Sbjct: 518 LISEGKSREACRYLEEML------DKGMKTPLI-----------DYNKFAADFHRGGQPE 560
Query: 300 MFSVLA 305
+F LA
Sbjct: 561 IFEELA 566
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 48/294 (16%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
+PD TYS L + N K + +MI G PD +VTY+ +
Sbjct: 233 FTPDSKTYSILLEGWGKEPN-------LPKAREVFREMIDAGCHPD-------IVTYSIM 278
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
+ C GRV+EALGI+R M P Y++++ + E ++E
Sbjct: 279 VDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTY--------GTENRLEEAVDTF 330
Query: 126 LRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFI 185
L ME S M+ D ++SL+ + M+ Y + +E+ G S + ++ +
Sbjct: 331 LEME----RSGMKA--DVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Query: 186 NGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELVKGFRMRG 244
L ++ EA ++ MI + + TY +I+ C E ++ ++ K R +G
Sbjct: 385 RHLIERGEKDEAFDVFRKMIK---VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKG 441
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+ P ++ LI C + KA + M+ G P
Sbjct: 442 VF----------------PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 479
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 95/240 (39%), Gaps = 34/240 (14%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T+ ++ Y +V+EA+ M + L P+ V++N ++S C+ + KA E
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQE----- 224
Query: 121 DEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
V+E++ + D YS L+ + + ++ KA + RE+ G + V
Sbjct: 225 -----------VFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIV 273
Query: 180 TESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
T S+ ++ L K R EA I+ SM + C K T Y L+
Sbjct: 274 TYSIMVDILCKAGRVDEALGIVRSMDPSIC--KPTTFIYSVLVHT--------------- 316
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
+ + EA M K D V+N LI C+ + Y + M G P+
Sbjct: 317 YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPN 376
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 31/252 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
+P+++TY L+ G+C + + EA I M + GL PD V++N+++ G R + A +
Sbjct: 294 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 353
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
L M K + +Y+ ++ D+ Q ME A ++ G
Sbjct: 354 LFHVMKSK--------------GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
++ + I G + + E+L M TY+ALI+ +N +
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG--HPPDGKTYNALIKLMANQK------ 451
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
+ R ++ M+ +P +N ++ + +N + ++ M+ G
Sbjct: 452 ---------MPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 502
Query: 296 FVPHMFSVLALI 307
P S LI
Sbjct: 503 ICPDDNSYTVLI 514
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 112/306 (36%), Gaps = 58/306 (18%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y L+N +C + + + + MI +G+ PD +V +N ++ G + +A
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPD-------IVAHNVMLEGLLRSMKKSDA 351
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ + M G P+ SY I+I FC K E I +++V L
Sbjct: 352 IKLFHVMKSKGPCPNVRSYTIMIRDFC-----------KQSSMETAIEYFDDMVDSGLQ- 399
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
D Y+ L+ + Q ++ Y L +E+ G+ + T + I ++ +
Sbjct: 400 --PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 457
Query: 199 EILLSMISNSCLSKTTHT-------------------TYDALIENCSNNEFKSLVELVKG 239
I MI N + + HT +D +I+ + S L++G
Sbjct: 458 RIYNKMIQNE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
G EA R + ML D G+ LI YN + H G P
Sbjct: 517 LISEGKSREACRYLEEML------DKGMKTPLI-----------DYNKFAADFHRGGQPE 559
Query: 300 MFSVLA 305
+F LA
Sbjct: 560 IFEELA 565
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 28/197 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL+PD TY++L +A + + C+ G + L + M+ G P+L T+N
Sbjct: 207 GLTPDVVTYTTLISALYK--HERCVIG-----NGLWNLMVLKGC-------KPNLTTFNV 252
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
I R +A +L MP++ + PD+++YN+VI GF R P +M E+
Sbjct: 253 RIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFP--------DMAERV 304
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
M Y+ ++ Y ++++ G+ + AY + ++ + T +
Sbjct: 305 YTAMHGKGYKPNLK------IYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEML 358
Query: 185 INGLSKKARTREAKEIL 201
+ GL KK + +AK I+
Sbjct: 359 LKGLVKKGQLDQAKSIM 375
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G+ TY+SL + S + +VS ++DQM + + PD +V
Sbjct: 280 MVGKGVPQSTVTYNSLMSFETS----------YKEVSKIYDQMQRSDIQPD-------VV 322
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI Y R EEAL + M + G+ P +YNI++ F +A + M
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
RI D +Y+++++ Y+ DME A + I DG+ VT
Sbjct: 383 RRDRIF--------------PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 428
Query: 181 ESVFINGLSKKARTREAKEILLSM-ISNSCLSKTTHTTYDALIENCSN 227
I G +K + E+ M +S ++T TT C N
Sbjct: 429 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN 476
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 124/313 (39%), Gaps = 53/313 (16%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
+ LI AY G F+ + + G +P++++Y AL+ Y G+ A
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMG-------STPNVISYTALMESYGRGGKCNNAE 201
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESL 136
I R M G P A++Y I++ F + +E + +E ++ ++K L+ ++ +Y +
Sbjct: 202 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD-EKKSPLKPDQKMYHMM 260
Query: 137 M---------------------QGLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
+ +G+ Y+SLM+ + ++ K Y ++
Sbjct: 261 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIY---DQMQRSDI 317
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLV 234
+ V+ ++ I + R EA + M+ + TH Y+ L++
Sbjct: 318 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV--RPTHKAYNILLD----------- 364
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
F + G+V +A +M PD Y ++ + +++ A + R+
Sbjct: 365 ----AFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD 420
Query: 295 GFVPHMFSVLALI 307
GF P++ + LI
Sbjct: 421 GFEPNIVTYGTLI 433
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLH---DQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGR 74
+ + L++ C + S +SN+H + M++NG+ PD VT + + C GR
Sbjct: 123 STFLILLSHACRAPD-SSISNVHRVLNLMVNNGLEPD-------QVTTDIAVRSLCETGR 174
Query: 75 VEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYE 134
V+EA +++ + E PD +YN ++ C+ ++ YE EM + ++ + V +
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 135 SLMQGLSDEDA----------------------YSSLMNDYLAQGDMEKAYILDREIAHD 172
L+ + + Y+++M + +A + +++ +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 173 GYLSESVTESVFINGLSKKARTREAKEILLSMI 205
G + +T + I GLSK R EA+ L +M+
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +++ +C + S+ ++ +M GV PD +TYN LI+G GRVEEA
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD-------QITYNTLIFGLSKAGRVEEAR 320
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCR 106
L+ M + G PD +Y +++G CR
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 14/136 (10%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P LV++ LI C + EA+ ++ + G PD YN ++ GFC + + +A +
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+M E+ + +++ Y +L+ GLS G +E+A + + + GY
Sbjct: 288 YKKMKEEGV-EPDQITYNTLIFGLS-------------KAGRVEEARMYLKTMVDAGYEP 333
Query: 177 ESVTESVFINGLSKKA 192
++ T + +NG+ +K
Sbjct: 334 DTATYTSLMNGMCRKG 349
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 111/281 (39%), Gaps = 38/281 (13%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
++ + AY S+ ++M+ G+ P + + L++ C V
Sbjct: 139 KVFWIVFRAYSRANLPSEACRAFNRMVEFGI-------KPCVDDLDQLLHSLCDKKHVNH 191
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
A G+ P A +Y+I++ G+ RIR+ A ++ EM E+
Sbjct: 192 AQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLER-------------- 237
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
+ D AY++L++ GD++ Y + +E+ + G ++ + ++FI+ A
Sbjct: 238 NCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSA 297
Query: 198 KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTML 257
++L M + T++ +I+ NE V +A D M+
Sbjct: 298 YKVLDRMKRYDLVPNV--YTFNHIIKTLCKNE---------------KVDDAYLLLDEMI 340
Query: 258 HGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
PD YN ++ HC V++A + +RM +P
Sbjct: 341 QKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 102/273 (37%), Gaps = 35/273 (12%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G+ P TYS L + + +A S + D+M+ + D L+ YNA
Sbjct: 203 GIVPSAKTYSILVRGWARIRDA-------SGARKVFDEMLERNCVVD-------LLAYNA 248
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ C G V+ + + M +GL PDA S+ I I +C + AY++ +D +
Sbjct: 249 LLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKV---LDRMK 305
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
+ VY ++ ++ ++ AY+L E+ G ++ T +
Sbjct: 306 RYDLVPNVY-----------TFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSI 354
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRG 244
+ A ++L M CL HT L F E+ +G R
Sbjct: 355 MAYHCDHCEVNRATKLLSRMDRTKCLPD-RHTYNMVLKLLIRIGRFDRATEIWEGMSERK 413
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCR 277
A + M+HG + G + E CR
Sbjct: 414 FYPTVA-TYTVMIHGLVRKKGK-----LEEACR 440
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +G+ TY+SL + S + +VS ++DQM + + PD +V
Sbjct: 273 MVGKGVPQSTVTYNSLMSFETS----------YKEVSKIYDQMQRSDIQPD-------VV 315
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+Y LI Y R EEAL + M + G+ P +YNI++ F +A + M
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
RI D +Y+++++ Y+ DME A + I DG+ VT
Sbjct: 376 RRDRIF--------------PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 421
Query: 181 ESVFINGLSKKARTREAKEILLSM-ISNSCLSKTTHTTYDALIENCSN 227
I G +K + E+ M +S ++T TT C N
Sbjct: 422 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN 469
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 124/313 (39%), Gaps = 53/313 (16%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
+ LI AY G F+ + + G +P++++Y AL+ Y G+ A
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMG-------STPNVISYTALMESYGRGGKCNNAE 194
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFC---RIREPGKAYELKMEMDEKRILRMEEVVYESL 136
I R M G P A++Y I++ F + +E + +E ++ ++K L+ ++ +Y +
Sbjct: 195 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD-EKKSPLKPDQKMYHMM 253
Query: 137 M---------------------QGLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
+ +G+ Y+SLM+ + ++ K Y ++
Sbjct: 254 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIY---DQMQRSDI 310
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLV 234
+ V+ ++ I + R EA + M+ + TH Y+ L++
Sbjct: 311 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV--RPTHKAYNILLD----------- 357
Query: 235 ELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
F + G+V +A +M PD Y ++ + +++ A + R+
Sbjct: 358 ----AFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD 413
Query: 295 GFVPHMFSVLALI 307
GF P++ + LI
Sbjct: 414 GFEPNIVTYGTLI 426
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 38/248 (15%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
FNA L++AY L +F V L ++ LP ++ P +V+YN LI C +
Sbjct: 147 FNA---LLSAYRLSKKFDVVEELFNE------LPGKLSIKPDIVSYNTLIKALCEKDSLP 197
Query: 77 EALGILRGMPEMGLSPDAVSYN-IVISGFCRIR-EPGKAYELKMEMDEKRILRMEEVVYE 134
EA+ +L + GL PD V++N +++S + + + E G+ E+ +M EK + ++ Y
Sbjct: 198 EAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGE--EIWAKMVEKNVA-IDIRTYN 254
Query: 135 SLMQGLSDEDAYSSLMNDY----------------------LAQGDMEKAYILDREIAHD 172
+ + GL++E L+N + + +G M++A +EI
Sbjct: 255 ARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKH 314
Query: 173 GYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL--SKTTHTTYDALIENCSNNEF 230
GY + T ++ + + K A E+ S L T D L++ E
Sbjct: 315 GYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEA 374
Query: 231 KSLVELVK 238
+ +V++ K
Sbjct: 375 EEIVKIAK 382
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 26/187 (13%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
++I YC G + N + M G++P+ LVTY L+ + G +E A+ +
Sbjct: 799 TIITGYCAAGRLDEAYNHLESMQKEGIVPN-------LVTYTILMKSHIEAGDIESAIDL 851
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
G PD V Y+ ++ G C + P A L +EM +K + + YE L+Q L
Sbjct: 852 FEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEM-QKSGINPNKDSYEKLLQCL- 906
Query: 142 DEDAYSSL-MNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEI 200
YS L M DM I R I H T ++I L ++ + REA+ +
Sbjct: 907 ---CYSRLTMEAVKVVKDMAALDIWPRSINH--------TWLIYI--LCEEKKLREARAL 953
Query: 201 LLSMISN 207
M+ +
Sbjct: 954 FAIMVQS 960
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 125/318 (39%), Gaps = 57/318 (17%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
+ Y ++N C + + D M G+ P++ Y+++I GRV E
Sbjct: 548 DTYLIVVNELCKKNDRDAAFAIIDAMEELGL-------RPTVAIYSSIIGSLGKQGRVVE 600
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
A M E G+ PD ++Y I+I+ + R +A EL E+ K LR Y L+
Sbjct: 601 AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEV-VKHFLRPSSFTYTVLI 659
Query: 138 QGLSD---------------EDA-------YSSLMNDYLAQGDMEKAYIL-----DREIA 170
G ED Y++L+ +L +GD + ++ L + +I
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 171 HDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT-YDALIENCSNNE 229
HD + ++GL + ++ +++++ L + T ++ + N
Sbjct: 720 HD-----HIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYG 774
Query: 230 FKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYT 289
KS V G + ++ P+ ++N +I +C +D+AYN
Sbjct: 775 SKSFAMEVIGKVKKSII----------------PNLYLHNTIITGYCAAGRLDEAYNHLE 818
Query: 290 RMVHYGFVPHMFSVLALI 307
M G VP++ + L+
Sbjct: 819 SMQKEGIVPNLVTYTILM 836
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
ML G+ PDE AY +IN Y G + + L ++++ + + PS
Sbjct: 608 MLESGIQPDE-------IAYMIMINTYARNGRIDEANELVEEVVKHFL-------RPSSF 653
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY LI G+ +G +E+ L M E GLSP+ V Y +I F + + ++ L M
Sbjct: 654 TYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLM 713
Query: 121 DEKRILRMEEVVYESLMQGL 140
E I + + + Y +L+ GL
Sbjct: 714 GENDI-KHDHIAYITLLSGL 732
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 31/196 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M RGL + TY++L F G+ + +M+ +GV PD ++
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQ-------AGDCDMAQEIFKEMVSDGVPPD-------IM 52
Query: 61 TYNALIYGYCFLGRVEEAL---------GILRGMPEMGLSPDAVSYNIVISGFCRIREPG 111
TYN L+ G C G++E+AL + + G+ P+ V+Y +ISGFC+
Sbjct: 53 TYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKE 112
Query: 112 KAYELKMEMDEKRILRMEEVVYESLMQG-LSDEDAYSSL-----MNDYLAQGDMEKAYIL 165
+AY L +M E L + Y +L++ L D D +S M GD Y L
Sbjct: 113 EAYTLFRKMKEDGPLP-DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD-ASTYGL 170
Query: 166 DREIAHDGYLSESVTE 181
++ HDG L + E
Sbjct: 171 VTDMLHDGRLDKGFLE 186
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
VTY LI G G + A I + M G+ PD ++YNI++ G C K +L+
Sbjct: 17 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC------KNGKLEKA 70
Query: 120 MDEKRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+ ++ ++ ++G+ + Y+++++ + +G E+AY L R++ DG L +S
Sbjct: 71 LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDS 130
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTY 218
T + I + + E++ M SC +TY
Sbjct: 131 GTYNTLIRAHLRDGDKAASAELIKEM--RSCRFAGDASTY 168
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 131/304 (43%), Gaps = 36/304 (11%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A+ S++ AYC G+ + L +M G+ SP LVT+N LI GY LG+ + A
Sbjct: 249 AWNSVLLAYCQNGKHEEAVELVKEMEKEGI-------SPGLVTWNILIGGYNQLGKCDAA 301
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ +++ M G++ D ++ +ISG G Y+ +D R + + VV ++
Sbjct: 302 MDLMQKMETFGITADVFTWTAMISGLI---HNGMRYQ---ALDMFRKMFLAGVVPNAVTI 355
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+S A S L + QG + + G++ + + + ++ SK + +A+
Sbjct: 356 -MSAVSACSCL--KVINQGSEVHSIAVKM-----GFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 199 EIL-----------LSMISNSCLSKTTHTTYDALIENCSNNEFKSLV---ELVKGFRMRG 244
++ SMI+ C + Y+ N +++ ++ G+ G
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG 467
Query: 245 LVSEAARAHDTM-LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSV 303
EA M G + + +N +I + + D+A ++ +M F+P+ ++
Sbjct: 468 DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTI 527
Query: 304 LALI 307
L+L+
Sbjct: 528 LSLL 531
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
++ +N+++ YC G+ EEA+ +++ M + G+SP V++NI+I G+ ++ + A +L
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ 306
Query: 119 EMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+M+ I +D ++++++ + G +A + R++ G + +
Sbjct: 307 KMETFGI--------------TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVK 238
VT ++ S + E+ + + D L+ N SLV++
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFID-------DVLVGN-------SLVDM-- 396
Query: 239 GFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+ G + +A + D++ D +N +I +C+ KAY ++TRM P
Sbjct: 397 -YSKCGKLEDARKVFDSV----KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 299 HMFSVLALI 307
++ + +I
Sbjct: 452 NIITWNTMI 460
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 122/303 (40%), Gaps = 43/303 (14%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
SL++ Y G+ + D + + V T+N++I GYC G +A +
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKNKDVY-----------TWNSMITGYCQAGYCGKAYEL 440
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
M + L P+ +++N +ISG+ + + G+A +L M++ ++ + ++ G
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAG-- 498
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
Y+ G ++A L R++ ++ SVT + + + +EI
Sbjct: 499 -----------YIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIH 547
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNN-------------EFKSLV---ELVKGFRMRGL 245
++ + H +AL + + + E K ++ L+ G+ + G
Sbjct: 548 GCVLRRNL--DAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGS 605
Query: 246 VSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH-YGFVPHMFSVL 304
A + M P+ G + +I+ H NVD+ ++ + + Y +P +
Sbjct: 606 YGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCS 665
Query: 305 ALI 307
A++
Sbjct: 666 AMV 668
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 32/251 (12%)
Query: 49 LPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIR 108
+PDF PS ++N ++ +E I P++G+ DA NI+I G C
Sbjct: 158 MPDFGCW-PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESG 216
Query: 109 EPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDRE 168
A +L E +++ + +S L+ + +G E+A+ L
Sbjct: 217 NLEAALQLLDEFPQQK--------------SRPNVMTFSPLIRGFCNKGKFEEAFKLLER 262
Query: 169 IAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNN 228
+ + +++T ++ I+GL KK R E ++L M C + TY
Sbjct: 263 MEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGC--EPNPGTYQ--------- 311
Query: 229 EFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
E++ G + EA M+ +P Y +++ C K+V + +
Sbjct: 312 ------EVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVL 365
Query: 289 TRMVHYGFVPH 299
+MV++GFVP
Sbjct: 366 RQMVNHGFVPK 376
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
LI C G L D+ P+ +T SP LI G+C G+ EEA +L
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSP-------LIRGFCNKGKFEEAFKLL 260
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
M + + PD +++NI+ISG +R+ G+ E
Sbjct: 261 ERMEKERIEPDTITFNILISG---LRKKGRVEE 290
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 108/278 (38%), Gaps = 35/278 (12%)
Query: 41 DQMIH--NGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYN 98
DQ + NGV P + ++ YN+L++ C + A ++R M GL PD +Y
Sbjct: 163 DQAVELFNGV-PKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYA 221
Query: 99 IVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGD 158
I+++G+C + +A E EM +R + L++GL L G
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEM-SRRGFNPPARGRDLLIEGL-------------LNAGY 267
Query: 159 MEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMIS-NSCLSKTTHTT 217
+E A + ++ G++ + T ++ I +SK E+ + C+ T+ T
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKT 327
Query: 218 YDA-------------LIENC---SNNEFKSL-VELVKGFRMRGLVSEAARAHDTMLHGN 260
L+ NC + F SL ++KG G+ +A M
Sbjct: 328 LIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 261 HKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
H P+ VY LI R A N M G VP
Sbjct: 388 HPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 41/69 (59%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
PS+VTY A+I GY LG+VEEA R M E G SPD +Y+ I+ C+ + A +L
Sbjct: 922 PSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKL 981
Query: 117 KMEMDEKRI 125
EM +K I
Sbjct: 982 LSEMLDKGI 990
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 89/230 (38%), Gaps = 32/230 (13%)
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMD 121
+ L+ +C G+++EAL ++R + + DA + I++ G CR A E+ M
Sbjct: 332 FGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMK 391
Query: 122 EKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTE 181
++ L D + Y +++ YL Q D+ KA I G T
Sbjct: 392 RRK---------------LDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTY 436
Query: 182 SVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFR 241
+ + L K L C ++ +IEN + ++ +V G
Sbjct: 437 TEIMQHLFK-----------LKQFEKGC------NLFNEMIENGIEPDSVAITAVVAGHL 479
Query: 242 MRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+ V+EA + +M KP Y+ + E CR D+ ++ +M
Sbjct: 480 GQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 14/102 (13%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G P TY+ + F L +F K NL ++MI NG+ PD V A
Sbjct: 428 GRPPRVSTYTEIMQHLFKL-------KQFEKGCNLFNEMIENGIEPDSVA-------ITA 473
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR 106
++ G+ RV EA + M E G+ P SY+I + CR
Sbjct: 474 VVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCR 515
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 110/293 (37%), Gaps = 46/293 (15%)
Query: 36 VSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAV 95
V L +M NG D + T+ LI Y ++ + L + M + G DA
Sbjct: 208 VDELVSEMEKNGCDKD-------IRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDAT 260
Query: 96 SYNIVISGFCRIREPGKAYELKMEMDEKRI---LRMEEVVYESLMQG------------- 139
+YNI+I C A E EM EK I LR +++ + + +
Sbjct: 261 AYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDM 320
Query: 140 -----LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
+S+ DA+ L+ + G +++A L RE+ + ++ + + GL + R
Sbjct: 321 VRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRM 380
Query: 195 REAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHD 254
+A EI+ M + ++ G+ + VS+A +
Sbjct: 381 VDALEIVDIMKRRKLDDSNVYGI------------------IISGYLRQNDVSKALEQFE 422
Query: 255 TMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+ P Y ++ + K +K N++ M+ G P ++ A++
Sbjct: 423 VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVV 475
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
SP + Y +I GY R+ +AL + MP D VS+N +ISG + A +
Sbjct: 63 SPHVSLYTKMITGYTRSNRLVDALNLFDEMP----VRDVVSWNSMISGCVECGDMNTAVK 118
Query: 116 LKMEMDEKRILRMEEVVYESLMQG-------------LSDEDAYSSLMNDYLAQGDMEKA 162
L EM E+ ++ +V G + D A++S+++ YL G ++ A
Sbjct: 119 LFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDA 178
Query: 163 YILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
L +++ +S + I GL + R+ EA ++ +M+ C K+T + +I
Sbjct: 179 LKLFKQMPGKNVIS----WTTMICGLDQNERSGEALDLFKNML--RCCIKSTSRPFTCVI 232
Query: 223 ENCSN 227
C+N
Sbjct: 233 TACAN 237
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 48/296 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L+ A+C E + ++ +++ H+ PD + T N L+ G+ G V
Sbjct: 182 LLRAFCTEREMKEARSIFEKL-HSRFNPD-------VKTMNILLLGFKEAGDVTATELFY 233
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE-------------------- 122
M + G P++V+Y I I GFC+ R G+A L +MD
Sbjct: 234 HEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVA 293
Query: 123 KRILRMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT- 180
+ ++ ++ E +GL+ D AY++LM+ + GD+ A + +E+ G +SVT
Sbjct: 294 RNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTF 353
Query: 181 ESVFINGL-SKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG 239
S+FI + SK+ E M S + KT ++V L+K
Sbjct: 354 HSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTP-----------------TIVMLMKL 396
Query: 240 FRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
F G V+ ML + P G L C + + A+ + V G
Sbjct: 397 FCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERG 452
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 109/284 (38%), Gaps = 58/284 (20%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
S V+YN +I GY G E A + MPE D VS+N++I G+ R R GKA EL
Sbjct: 94 SSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELF 149
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDED-------------AYSSLMNDYLAQGDMEKAYI 164
M E+ + ++ G D+ ++++L++ Y+ ME+A +
Sbjct: 150 EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 165 LDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA---- 220
L + + V+ + + G KK + EA++ SM +S T T A
Sbjct: 210 LFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK 265
Query: 221 ------LIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKP----------- 263
L + + + +V G+ +V EA D M N
Sbjct: 266 IDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG 325
Query: 264 ----------------DGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+ +N +I + +C + +A N++ +M
Sbjct: 326 ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKM 369
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 123/272 (45%), Gaps = 50/272 (18%)
Query: 26 AYCLGG---EFSKVS-NLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
AY GG EF ++ LH Q+I NG + T +L++ Y G + A +
Sbjct: 306 AYACGGLGVEFRRLGEQLHAQVISNG----WETVDHDGRLAKSLVHMYASSGLIASAQSL 361
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
L S D S NI+I+ + + + +A E ++E + + L
Sbjct: 362 LNE------SFDLQSCNIIINRYLKNGDLERA----------------ETLFERV-KSLH 398
Query: 142 DEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
D+ +++S+++ YL GD+ +A+ L +++ HD + VT +V I+GL + EA +L
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKL-HD---KDGVTWTVMISGLVQNELFAEAASLL 454
Query: 202 LSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNH 261
M+ C K ++TY L+ + L +G + ++++ +D
Sbjct: 455 SDMVR--CGLKPLNSTYSVLLSSAGATS-----NLDQGKHIHCVIAKTTACYD------- 500
Query: 262 KPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
PD + N L+ + +C ++ AY ++ +MV
Sbjct: 501 -PDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ 531
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 89/235 (37%), Gaps = 35/235 (14%)
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
YNA Y G A + M G P + I+I +M
Sbjct: 158 FAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILI---------------RM 202
Query: 119 EMDEKRILRMEEVVYESLMQ-GLSDED-AYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
D +R LR+ VYE + + G Y+ +M+ + G + A + + DG +
Sbjct: 203 HADNRRGLRVY-YVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVE 261
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
ES T + + GL K R E EIL M N C K Y A+I K+LV
Sbjct: 262 ESTTFMILVKGLCKAGRIEEMLEILQRMRENLC--KPDVFAYTAMI--------KTLVS- 310
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
G + + R D M KPD Y L+V C+ V++ Y ++ M
Sbjct: 311 ------EGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEM 359
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
+ L+ C G ++ + +M N PD + Y A+I G ++
Sbjct: 264 TTFMILVKGLCKAGRIEEMLEILQRMRENLCKPD-------VFAYTAMIKTLVSEGNLDA 316
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
+L + M + PD ++Y ++ G C+ + YEL MEM K+I
Sbjct: 317 SLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQI------------ 364
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
L D + Y L+ ++A G + A L ++ GY+++ + I GL
Sbjct: 365 --LIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGL 413
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 46/253 (18%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
+++++NA+I GY R++EA + + MPE D S+N +I+GF R RE KA L
Sbjct: 232 NIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLF 287
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
M EK ++ ++++++ Y+ + E+A + ++ DG +
Sbjct: 288 DRMPEKNVI------------------SWTTMITGYVENKENEEALNVFSKMLRDGSVKP 329
Query: 178 SVTESVFI-NGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
+V V I + S A E ++I + +SK+ H + ++ + N + EL
Sbjct: 330 NVGTYVSILSACSDLAGLVEGQQI------HQLISKSVHQK-NEIVTSALLNMYSKSGEL 382
Query: 237 VKGFRM--RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
+ +M GLV + D +N +I + + +A MY +M +
Sbjct: 383 IAARKMFDNGLVCQR--------------DLISWNSMIAVYAHHGHGKEAIEMYNQMRKH 428
Query: 295 GFVPHMFSVLALI 307
GF P + L L+
Sbjct: 429 GFKPSAVTYLNLL 441
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 120/272 (44%), Gaps = 45/272 (16%)
Query: 49 LPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIR 108
L D V ++VT+ A++ GY ++ A + + MPE + VS+N +I G+ +
Sbjct: 99 LFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSG 154
Query: 109 EPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDRE 168
KA EL EM E+ I+ +++S++ + +G +++A L
Sbjct: 155 RIDKALELFDEMPERNIV------------------SWNSMVKALVQRGRIDEAMNLFER 196
Query: 169 IAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTT----------Y 218
+ + V+ + ++GL+K + EA+ + M + +S T
Sbjct: 197 MPR----RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEA 252
Query: 219 DALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGV--YNFLIVEHC 276
D L + +F S ++ GF +++A D M P+ V + +I +
Sbjct: 253 DQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM------PEKNVISWTTMITGYV 306
Query: 277 RCKNVDKAYNMYTRMVHYGFV-PHMFSVLALI 307
K ++A N++++M+ G V P++ + ++++
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNL--HDQMIHNGVLPDFVTGSPSLVT 61
RGL PD TY+ + I+ Y GG + + + H + P VT
Sbjct: 436 RGLKPDVYTYTVI-------ISGYAKGGMMDEAQEILAEAKKKHKKLSP---------VT 479
Query: 62 YNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC-RIREPGKAYELKMEM 120
Y+ALI GYC + +EAL +L M G+ P+A YN +I FC + + KA L EM
Sbjct: 480 YHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEM 539
Query: 121 DEK 123
+K
Sbjct: 540 KQK 542
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 123/302 (40%), Gaps = 50/302 (16%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L++A C G + S ++ + I + ++V PS+ +N L+ G+ ++++A +
Sbjct: 218 LLDALCKEGHVREAS-MYLERIGGTMDSNWV---PSVRIFNILLNGWFRSRKLKQAEKLW 273
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL--KMEMDEKRILRMEEVVYESLMQGL 140
M M + P V+Y +I G+CR+R A E+ +M+M E I M V+ ++ GL
Sbjct: 274 EEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFM---VFNPIIDGL 330
Query: 141 SDED----------------------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
+ Y+SL+ ++ GD+ A + + + G +
Sbjct: 331 GEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTT 390
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSLVELV 237
T + F SK +T E + +I TY +++ C + + +++
Sbjct: 391 TTYNHFFKYFSKHNKTEEGMNLYFKLIEAG--HSPDRLTYHLILKMLCEDGKLSLAMQVN 448
Query: 238 KGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFV 297
K + RG+ PD LI CR + +++A+ + V G +
Sbjct: 449 KEMKNRGI----------------DPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGII 492
Query: 298 PH 299
P
Sbjct: 493 PQ 494
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 121/305 (39%), Gaps = 48/305 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M R + PD T+ +F A + N G+ + V LH Q + G+L D L
Sbjct: 106 MRRRSVPPDFHTFPFVFKACAAKKN-----GDLTLVKTLHCQALRFGLLSD-------LF 153
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
T N LI Y + ++ AL + P+ D V+YN++I G + RE +A EL
Sbjct: 154 TLNTLIRVYSLIAPIDSALQLFDENPQR----DVVTYNVLIDGLVKAREIVRAREL---- 205
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
++S+ L D +++SL++ Y +A L E+ G ++V
Sbjct: 206 ------------FDSM--PLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVA 251
Query: 181 ESVFINGLSKKARTREAKEI-----LLSMISNSCLSKTTHTTYDA---------LIENCS 226
++ ++ ++ K I + +S L+ Y + E CS
Sbjct: 252 IVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCS 311
Query: 227 NNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYN 286
+ + ++ G M G M+ KPDG + ++V VD+A N
Sbjct: 312 DKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARN 371
Query: 287 MYTRM 291
++ +M
Sbjct: 372 LFDQM 376
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 34/260 (13%)
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
+YN +I G+ LG VEE +L+ M E G PD +SY+ +I G R + E+ +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVT 180
K + D + Y++++ ++++ D +++ R + + T
Sbjct: 317 KHK--------------GNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLET 362
Query: 181 ESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGF 240
S ++GL K + +A EI M+S L TT L CS + + + +
Sbjct: 363 YSKLVSGLIKGRKVSDALEIFEEMLSRGVLP-TTGLVTSFLKPLCSYGPPHAAMVIYQKS 421
Query: 241 RMRGL-VSEAA------------------RAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
R G +SE+A D M + D VY +++ C ++
Sbjct: 422 RKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHL 481
Query: 282 DKAYNMYTRMVHYGFVPHMF 301
+ A + + GF P+ F
Sbjct: 482 ENAVLVMEEAMRKGFCPNRF 501
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 17/140 (12%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M + LSP+ +Y S + +F+ NL D M G+ PD +
Sbjct: 254 MKSKNLSPN-------IRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPD-------VH 299
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TYNALI Y +EE + M E GL+PD V+Y ++I C+ + +A E+ E
Sbjct: 300 TYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEA 359
Query: 121 DEKRIL---RMEEVVYESLM 137
+ ++L M + V E LM
Sbjct: 360 IKHKLLSRPNMYKPVVERLM 379
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 38/221 (17%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
FNA L++AY L + M LP+ + +P LVTYN +I C G ++
Sbjct: 160 FNA---LLSAYV------NSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMD 210
Query: 77 EALGILRGMPEMGLSPDAVSYNIVISGFCRIR---EPGKAYELKMEMDEKRILRMEEVVY 133
+ L I + + G PD +S+N ++ F R E + ++L + +R Y
Sbjct: 211 DILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIR----SY 266
Query: 134 ESLMQGLS----------------------DEDAYSSLMNDYLAQGDMEKAYILDREIAH 171
S ++GL+ D Y++L+ Y ++E+ E+
Sbjct: 267 NSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKE 326
Query: 172 DGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSK 212
G ++VT + I L KK A E+ I + LS+
Sbjct: 327 KGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSR 367
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 28/231 (12%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P + TYN+LI+ C G+ ++AL + + G PD +Y I+I G C K+Y +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCC------KSYRM 340
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
D RI E+ Y + D Y+ L++ L + +A L ++ +G +
Sbjct: 341 D---DAMRIY--GEMQYNGF---VPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRA 392
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDAL------IENCSNNEF 230
T ++ I+GL + R EA L C K DA+ ++ C +
Sbjct: 393 SCWTYNILIDGLFRNGRA-EAGFTLF------CDLKKKGQFVDAITFSIVGLQLCREGKL 445
Query: 231 KSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNV 281
+ V+LV+ RG + ++L G HK + +++H R N+
Sbjct: 446 EGAVKLVEEMETRGFSVDLVTIS-SLLIGFHKQGRWDWKEKLMKHIREGNL 495
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 121/323 (37%), Gaps = 53/323 (16%)
Query: 11 GTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMI--------HNGVLPDFVTGSPSLVTY 62
G Y+ +A+ + +Y + + +++L D ++ H L F T P T+
Sbjct: 217 GKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTF 276
Query: 63 NALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
N LI+G+C + ++A ++ M +PD V+Y + +C+ + + E+ EM E
Sbjct: 277 NILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRE 336
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
V Y +M L + + Y ++ DG + ++ S
Sbjct: 337 NGC-NPNVVTYTIVMHSLGKSKQVAEALGVY-------------EKMKEDGCVPDAKFYS 382
Query: 183 VFINGLSKKARTREAKEILLSM----------ISNSCLSKTTHTTYDALI---------- 222
I+ LSK R ++A EI M + N+ +S H + D +
Sbjct: 383 SLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDE 442
Query: 223 --ENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGV----YNFLIVEHC 276
E+CS N VE + + +LH K D + Y LI C
Sbjct: 443 EGESCSPN-----VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLC 497
Query: 277 RCKNVDKAYNMYTRMVHYGFVPH 299
V++A + V G VP
Sbjct: 498 MSGKVEEACLFFEEAVRKGMVPR 520
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 116/297 (39%), Gaps = 33/297 (11%)
Query: 18 NAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEE 77
++++L++A C E V + V+ + + S + + +N ++ G+ LG +
Sbjct: 152 TSFYNLVDALC---EHKHVVEAEELCFGKNVIGNGFSVSNTKI-HNLILRGWSKLGWWGK 207
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM 137
+ M G++ D SY+I + C+ +P KA +L EM +R ++++ V Y +++
Sbjct: 208 CKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR-MKLDVVAYNTVI 266
Query: 138 QGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREA 197
+ + A +E + RE+ G T + I L + R R+A
Sbjct: 267 RAIG-------------ASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDA 313
Query: 198 KEILLSMISNSC-------------LSKTTH--TTYDALIENCSNNEFKSLVELVKGFRM 242
+L M C L K + + + +I + + + V L++ F
Sbjct: 314 YRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFER 373
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
G + TM PD YN +I + +D A M+ G P
Sbjct: 374 WGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPR 430
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 25/162 (15%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQM-IHNGVLPDFVTGSPSLVTYN 63
GL PD TY+ S+IN YC G+ L +M H+ VL VTY+
Sbjct: 195 GLYPDVITYT-------SMINGYCNAGKIDDAWRLAKEMSKHDCVLNS--------VTYS 239
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMG----LSPDAVSYNIVISGFCRIREPGKAYELKME 119
++ G C G +E AL +L M + +SP+AV+Y +VI FC R +A L ++
Sbjct: 240 RILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEAL-LVLD 298
Query: 120 MDEKRILRMEEVVYESLMQGL--SDED--AYSSLMNDYLAQG 157
R V L+QG+ +DED A S L++ + G
Sbjct: 299 RMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG 340
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 107/252 (42%), Gaps = 42/252 (16%)
Query: 50 PDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIRE 109
P+F + + V YN +I + G + A +++ M +GL PD ++Y +I+G+C +
Sbjct: 157 PEFNVCADT-VAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGK 215
Query: 110 PGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI 169
A+ L EM + + + V Y +++G+ GDME+A L E+
Sbjct: 216 IDDAWRLAKEMSKHDCV-LNSVTYSRILEGVC-------------KSGDMERALELLAEM 261
Query: 170 AHD---GYLS-ESVTESVFINGLSKKARTREAKEILLSMISNSCLSK--TTHTTYDALIE 223
+ G +S +VT ++ I +K R EA +L M + C+ T ++E
Sbjct: 262 EKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLE 321
Query: 224 NCSNNEFKSLVELVKGFRMRGLVS-------------------EAARAHDTMLHGNHKPD 264
N + + K+L +L+ G VS EA + ML +PD
Sbjct: 322 N--DEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPD 379
Query: 265 GGVYNFLIVEHC 276
G + + E C
Sbjct: 380 GLACSHVFRELC 391
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 38 NLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSY 97
N+ D +I D V P ++TY ++I GYC G++++A + + M + ++V+Y
Sbjct: 182 NIADMLIKE---MDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTY 238
Query: 98 NIVISGFCRIREPGKAYELKMEMDEKR---ILRMEEVVYESLMQGLSDEDAYSSLMNDYL 154
+ ++ G C+ + +A EL EM+++ ++ V Y ++Q ++
Sbjct: 239 SRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVE------- 291
Query: 155 AQGDMEKAYILDREIAHDGYLSESVTESVFINGL 188
E +LDR + + G + VT V I G+
Sbjct: 292 -----EALLVLDR-MGNRGCMPNRVTACVLIQGV 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 76 EEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYES 135
+EAL +LR PE + D V+YN+VI F + A L EMD
Sbjct: 147 DEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMD-------------- 192
Query: 136 LMQGL-SDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKART 194
GL D Y+S++N Y G ++ A+ L +E++ + SVT S + G+ K
Sbjct: 193 -CVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDM 251
Query: 195 REAKEILLSM 204
A E+L M
Sbjct: 252 ERALELLAEM 261
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 29/188 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A SL++ Y G + L D+ +PD S+VT+ AL GY GR EA
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDE------IPD-----RSVVTWTALFSGYTTSGRHREA 196
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+ + + M EMG+ PD+ V+S + + ++ E + MEE M+
Sbjct: 197 IDLFKKMVEMGVKPDSYFIVQVLSACVHVGD--------LDSGEWIVKYMEE------ME 242
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
+ ++L+N Y G MEKA R + + VT S I G + + +E
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKA----RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 199 EILLSMIS 206
E+ L M+
Sbjct: 299 ELFLQMLQ 306
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
AY ++ A G+F + L D + P + + +L T+N ++ GYC G+ EEA
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHL--AVNLGTFNVMVNGYCAGGKFEEA 369
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLM- 137
+ + R M + SPD +S+N +++ C +A +L EM+EK + + +E Y LM
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNV-KPDEYTYGLLMD 428
Query: 138 ----QGLSDEDA 145
+G DE A
Sbjct: 429 TCFKEGKIDEGA 440
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 129/340 (37%), Gaps = 69/340 (20%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
G++P+ TY+ +F AY V + H + D +PS+ T+
Sbjct: 160 GIAPNIITYNLIFQAYLD-------------VRKPEIALEHYKLFIDNAPLNPSIATFRI 206
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
L+ G +E+A+ I M G D V Y+ ++ G + + +L E+ EK
Sbjct: 207 LVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKL 266
Query: 125 ILRMEE-VVYESLMQGLSDEDAYSSLM---------NDYLAQGDMEKAYILDREIAHDGY 174
+++ VVY LM+G ++ M N + M Y+L+ ++ +G
Sbjct: 267 GGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEA-LSENGK 325
Query: 175 LSESV---------------------TESVFINGLSKKARTREAKEILLSMISNSCLSKT 213
E++ T +V +NG + EA E+ M C T
Sbjct: 326 FDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDT 385
Query: 214 THTTYDALIENCSNNEFKSLVELVKG---------------------FRMRGLVSEAARA 252
+++ L+ +NE + E + G F+ G + E A
Sbjct: 386 --LSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFK-EGKIDEGAAY 442
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMV 292
+ TM+ N +P+ VYN L + + +D A + + MV
Sbjct: 443 YKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMV 482
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y +LI+ Y + GE K + +M G LP+ + TYN++I G C G EA
Sbjct: 727 YTTLIDGYVVSGELDKAKEMFREMTVKGQLPN-------VFTYNSMIRGLCMAGEFREAC 779
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE 122
+L+ M G +P+ V Y+ ++ G+ +R+ GK E + + E
Sbjct: 780 WLLKEMESRGCNPNFVVYSTLV-GY--LRKAGKLSEARKVIKE 819
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 75/192 (39%), Gaps = 24/192 (12%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
DE ++++ + Y LI+ + V + +M NG+ PD +T AL++
Sbjct: 376 DEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTA-------TALVHM 428
Query: 69 YCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRM 128
Y G E A + GL PD Y +I G+ +P L EM K +
Sbjct: 429 YSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKAS 488
Query: 129 EEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREI--AHDGYLSESVTESVFIN 186
EEV Y +L+ Y GD A + + A DG LS S+F+
Sbjct: 489 EEV--------------YMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAY-SLFVE 533
Query: 187 GLSKKARTREAK 198
K + +AK
Sbjct: 534 AYGKAGQVDKAK 545
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
SLI+ Y +F +V N V D G LV +NA+I GY + +EAL +
Sbjct: 157 SLIDMY---SKFGEVGNARK------VFSDL--GEQDLVVFNAMISGYANNSQADEALNL 205
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL 140
++ M +G+ PD +++N +ISGF +R K E+ +E+ + + V + S++ GL
Sbjct: 206 VKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEI-LELMCLDGYKPDVVSWTSIISGL 263
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 132/314 (42%), Gaps = 46/314 (14%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
SL + Y G S + D+ +PD + V +NAL+ GY G+ EEA+ +
Sbjct: 213 SLADMYGKCGVLDDASKVFDE------IPD-----RNAVAWNALMVGYVQNGKNEEAIRL 261
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCR---IREPGKAYELK----MEMD------------E 122
M + G+ P V+ + +S + E +++ + ME+D +
Sbjct: 262 FSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCK 321
Query: 123 KRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTES 182
++ E+V++ + + D ++ +++ Y+ QG +E A + + + + + VT +
Sbjct: 322 VGLIEYAEMVFDRMFE--KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLA 379
Query: 183 VFINGLSKKARTREAKEILLSMISNSCLSKTT-HTTYDALIENC-----SNNEFKSLVE- 235
++ ++ + KE+ I +S S +T + C + F S VE
Sbjct: 380 TLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK 439
Query: 236 -------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
L+ + GL EA R M P+ +N +I+ R VD+A +M+
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 289 TRMVHYGFVPHMFS 302
+M G +P++ S
Sbjct: 500 LQMQSSGIIPNLIS 513
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 31 GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGL 90
G F + + M + G PD +T Y+ L++G C R+EEA G+L M G
Sbjct: 384 GRFDEAEEITKAMRNAGYEPDNIT-------YSQLVFGLCKAKRLEEARGVLDQMEAQGC 436
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEK 123
PD ++ I+I G C+ E KA M EK
Sbjct: 437 FPDIKTWTILIQGHCKNNELDKALACFANMLEK 469
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 36/205 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKV-SNLHDQMIHNGVLPDFVTGSPSL 59
M +G+ P+ ++ + + ++ A E KV + + D+ ++ GV
Sbjct: 213 MERKGIKPNSSSFGLMISGFY----AEDKSDEVGKVLAMMKDRGVNIGV----------- 257
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR---IREPGKAYEL 116
TYN I C + +EA +L GM G+ P+ V+Y+ +I GFC E K +++
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKI 317
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
+ K D + Y +L+ GD E A L +E ++
Sbjct: 318 MVNRGCK-----------------PDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
Query: 177 ESVTESVFINGLSKKARTREAKEIL 201
+NGL+K ++ EAKE++
Sbjct: 361 SFSIMKSLVNGLAKDSKVEEAKELI 385
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 35/251 (13%)
Query: 56 SPSLVTYNALIYGYCFLGRVEEALGILRGMPEM-GLSPDAVSYNIVISGFCRIREPGKAY 114
S ++ + NAL++ +EA + MP+M G+ PD +YN +I FC +Y
Sbjct: 148 SRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSY 207
Query: 115 ELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
+ EM+ K I + + ++ G ED S + LA + DR G
Sbjct: 208 SIVAEMERKGI-KPNSSSFGLMISGFYAEDK-SDEVGKVLAM-------MKDR-----GV 253
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSL 233
T ++ I L K+ +++EAK +L M+S K TY LI C+ ++F+
Sbjct: 254 NIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM--KPNTVTYSHLIHGFCNEDDFE-- 309
Query: 234 VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVH 293
EA + M++ KPD Y LI C+ + + A ++ +
Sbjct: 310 --------------EAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESME 355
Query: 294 YGFVPHMFSVL 304
+VP FS++
Sbjct: 356 KNWVPS-FSIM 365
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 107/249 (42%), Gaps = 40/249 (16%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVE 76
FNA L+NA +F V + + LP ++ P + +YN LI G C G
Sbjct: 144 FNA---LLNACVNSKKFDLVEGIFKE------LPGKLSIEPDVASYNTLIKGLCGKGSFT 194
Query: 77 EALGILRGMPEMGLSPDAVSYNIVI-SGFCRIR-EPGKAYELKM-EMDEKRILRMEEVVY 133
EA+ ++ + GL PD +++NI++ + + + E G+ +M E + KR +R Y
Sbjct: 195 EAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRS----Y 250
Query: 134 ESLMQGLSDED----------------------AYSSLMNDYLAQGDMEKAYILDREIAH 171
+ + GL+ E+ +++++ ++++G +++A +EI
Sbjct: 251 NARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEK 310
Query: 172 DGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCL--SKTTHTTYDALIENCSNNE 229
+G + + + K A E+ + + L DAL++ +E
Sbjct: 311 NGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDE 370
Query: 230 FKSLVELVK 238
+ +VEL K
Sbjct: 371 AEEIVELAK 379
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 28/179 (15%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLV 60
M+ +GL P TY+S+ I+ +C GE + + +M + +P ++
Sbjct: 640 MVSKGLKPTVATYNSM-------IDGWCKEGEIDRGLSCIVRMYED-------EKNPDVI 685
Query: 61 TYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM 120
TY +LI+G C GR EA+ M P+ +++ +I G C+ G+A EM
Sbjct: 686 TYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREM 745
Query: 121 DEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESV 179
+EK ME D Y SL++ +L+ ++ + + RE+ H G SV
Sbjct: 746 EEK---EME-----------PDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSV 790
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 124/324 (38%), Gaps = 79/324 (24%)
Query: 23 LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGIL 82
L+ ++C G+ K L + + + ++ T Y LI+G+ R+++A +
Sbjct: 254 LVVSFCKWGQVDKAFELIEMLEERDIRLNYKT-------YCVLIHGFVKESRIDKAFQLF 306
Query: 83 RGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEM--------------------DE 122
M MG++ D Y+++I G C+ ++ A L +E+ +E
Sbjct: 307 EKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEE 366
Query: 123 KRILRMEEVV------------YESLMQGLSDED----AYS---SLMNDYLAQGDMEKAY 163
+ R+ EV+ Y+SL +G D AYS +LM +Y + G E
Sbjct: 367 SELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVK 426
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
+L + L +S + S+ IN L K + A +L ++ N + Y+ +IE
Sbjct: 427 LLKDH--NKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGP--MMYNNIIE 482
Query: 224 NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHC------- 276
G+ E L G K D GV +C
Sbjct: 483 --------------------GMCKEGRSEESLKLLGEMK-DAGVEPSQFTLNCIYGCLAE 521
Query: 277 RCKNVDKAYNMYTRMVHYGFVPHM 300
RC V A ++ +M YGF P +
Sbjct: 522 RCDFVG-ALDLLKKMRFYGFEPWI 544
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSP-SLVTYN 63
GL+PD SL+NA LI A C L D+M FV G +L TYN
Sbjct: 427 GLAPD----VSLYNA---LIEACCKAEMIRPAKKLWDEM--------FVEGCKMNLTTYN 471
Query: 64 ALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFC---RIREPGKAYELKMEM 120
LI G EE+L + M E G+ PD Y +I G C +I + + ME
Sbjct: 472 VLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMER 531
Query: 121 DEKRILR 127
D K + R
Sbjct: 532 DHKTVTR 538
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 53/264 (20%)
Query: 5 GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNA 64
GL PD TY++L + N Y K L ++ HNG+ D V Y
Sbjct: 196 GLKPDVVTYNTLLAGCIKVKNGY------PKAIELIGELPHNGIQMDSVM-------YGT 242
Query: 65 LIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKR 124
++ GR EEA ++ M G SP+ Y+ +++ + + KA EL EM
Sbjct: 243 VLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIG 302
Query: 125 IL--------------------RMEEVVYESLMQGLSD-EDAYSSLMNDYLAQGDMEKAY 163
++ R E++ E G ++ E Y LM+ G +E+A
Sbjct: 303 LVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEAR 362
Query: 164 ILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDA--- 220
+ ++ G S+ S+ I+ L + R +EAKE LS+ + TTY+
Sbjct: 363 SIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKE----------LSRDSETTYEKCDL 412
Query: 221 ------LIENCSNNEFKSLVELVK 238
L C E +S++ ++K
Sbjct: 413 VMLNTMLCAYCRAGEMESVMRMMK 436
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 126/342 (36%), Gaps = 60/342 (17%)
Query: 1 MLWRGLSPDEGTYSSLFNAYFS---LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSP 57
M+ +G+ P TY +L + Y ++A C G+ SK+ D++ VL +
Sbjct: 213 MIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKARE 272
Query: 58 ------------------------SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPD 93
S TYN +I Y G+++EA + M E G+ P
Sbjct: 273 FQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPT 332
Query: 94 AVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDY 153
V++N +I + + G+ L M + D Y+ L++ +
Sbjct: 333 TVTFNTMIHIYGNNGQLGEVTSLMKTMK---------------LHCAPDTRTYNILISLH 377
Query: 154 LAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSM------ISN 207
D+E+A +E+ DG + V+ + S + EA+ ++ M I
Sbjct: 378 TKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDE 437
Query: 208 SCLSKTTHTTYDALIENCSNNEFKSL-----------VELVKGFRMRGLVSEAARAHDTM 256
S T +A + S + FK + + RG +SEA R
Sbjct: 438 YTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICC 497
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
N K YN +I + K+ +KA ++ M+ YG P
Sbjct: 498 QEVN-KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTP 538
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/258 (17%), Positives = 109/258 (42%), Gaps = 58/258 (22%)
Query: 1 MLWRGLSPDEGTYSSLFN----------------------------AYFSLINAYCLGGE 32
M+ G++PD+ TY++L Y ++I+++ G+
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 33 FSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSP 92
+ ++ +M+ + PD +V Y LI + G V++A+ + M E G+
Sbjct: 591 LNMAEEVYKEMVEYNIEPD-------VVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPG 643
Query: 93 DAVSYNIVISGFCRIREPGKAYELKMEM----------------------DEKRILRMEE 130
++V YN +I + ++ +A + ++ E+ ++R E
Sbjct: 644 NSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAE 703
Query: 131 VVYESLMQ-GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLS 189
+++S+ Q G ++E ++ ++ Y G E+A + +++ L++ ++ + + +
Sbjct: 704 AIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFA 763
Query: 190 KKARTREAKEILLSMISN 207
R +EA E M+S+
Sbjct: 764 LDGRFKEAVETFKEMVSS 781
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 132/337 (39%), Gaps = 61/337 (18%)
Query: 8 PDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIY 67
PD T+ ++ AY +L G EF +H ++ +G + D V S +L+
Sbjct: 105 PDSFTFPNVIKAYGAL------GREFLG-RMIHTLVVKSGYVCDVVVAS-------SLVG 150
Query: 68 GYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDE----- 122
Y E +L + MPE D S+N VIS F + E KA EL M+
Sbjct: 151 MYAKFNLFENSLQVFDEMPER----DVASWNTVISCFYQSGEAEKALELFGRMESSGFEP 206
Query: 123 ------------KRILRME---EVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKAYILD 166
R+L +E E+ + + +G DE S+L++ Y +E A
Sbjct: 207 NSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVA---- 262
Query: 167 REIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCS 226
RE+ V + I G K ++ EIL MI ++ + TT +++ CS
Sbjct: 263 REVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG--TRPSQTTLTSILMACS 320
Query: 227 NNEFKSLVELVKGFRMRGLVSE----------------AARAHDTMLHGNHKPDGGVYNF 270
+ + + G+ +R +V+ A +T+ K +N
Sbjct: 321 RSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNV 380
Query: 271 LIVEHCRCKNVDKAYNMYTRMVHYGFVPHMFSVLALI 307
+I + N KA +Y +MV G P + + +++
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL 417
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 123/336 (36%), Gaps = 60/336 (17%)
Query: 14 SSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLG 73
+S A L+ C S + +M + G PD +Y L+ G+C G
Sbjct: 149 NSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPD-------RDSYRILMKGFCLEG 201
Query: 74 RVEEALGILRGM----PEMGLSPDAVSYNIVISGFCRIREPGKAYEL------------- 116
++EEA +L M + G D V Y I++ C E A E+
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 117 ---------KMEMDEKRILRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKAYILD 166
E + I R++ ++ E+L++G + D+YS++ D +G + + +
Sbjct: 262 RCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVL 321
Query: 167 REIAHDGYLSESVTESVFINGLSKKARTREAKEIL-LSMISNSCLSKTTHTTYDALIE-- 223
+ G+ + L + + +EA ++ M+ CL T Y+ LI+
Sbjct: 322 LAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP--TVGVYNVLIKGL 379
Query: 224 --------------------NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKP 263
+C NE ++ LV G G EA++ + ML +H P
Sbjct: 380 CDDGKSMEAVGYLKKMSKQVSCVANE-ETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 264 DGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
Y+ +I C +A MV VP
Sbjct: 439 GVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPE 474
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 23/167 (13%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYEL 116
P+ ++ +I G+ + +E ++R M E G+ +YNI+I C+ ++ +A L
Sbjct: 215 PTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKAL 274
Query: 117 KMEMDEKRILRMEEVVYESLMQGL----------------------SDEDAYSSLMNDYL 154
+ R +R V Y L+ G D + Y +L++
Sbjct: 275 IDGVMSCR-MRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLC 333
Query: 155 AQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEIL 201
GD E A IL RE ++ +NGL+ +++ EAKE++
Sbjct: 334 KGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 37/253 (14%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEM-GLSPDAVSYNIVISGFCRIREPGKAYEL 116
++ + NAL++ +EA + MP+M G+ PD +YN +I C +Y +
Sbjct: 145 TVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSI 204
Query: 117 KMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLS 176
EM E++ ++ + ++ G E+ + + + ++D H G
Sbjct: 205 VAEM-ERKWIKPTAASFGLMIDGFYKEEKFDEVR---------KVMRMMDEFGVHVGV-- 252
Query: 177 ESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
T ++ I L K+ ++ EAK ++ ++S C + TY LI
Sbjct: 253 --ATYNIMIQCLCKRKKSAEAKALIDGVMS--CRMRPNSVTYSLLIH------------- 295
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCK--NVDKAYNMYTRMVHY 294
GF + EA + M+ +KPD Y LI HC CK + + A + +
Sbjct: 296 --GFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLI--HCLCKGGDFETALILCRESMEK 351
Query: 295 GFVPHMFSVLALI 307
+VP FSV+ +
Sbjct: 352 NWVPS-FSVMKWL 363
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 123/336 (36%), Gaps = 60/336 (17%)
Query: 14 SSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLG 73
+S A L+ C S + +M + G PD +Y L+ G+C G
Sbjct: 149 NSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPD-------RDSYRILMKGFCLEG 201
Query: 74 RVEEALGILRGM----PEMGLSPDAVSYNIVISGFCRIREPGKAYEL------------- 116
++EEA +L M + G D V Y I++ C E A E+
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 117 ---------KMEMDEKRILRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKAYILD 166
E + I R++ ++ E+L++G + D+YS++ D +G + + +
Sbjct: 262 RCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVL 321
Query: 167 REIAHDGYLSESVTESVFINGLSKKARTREAKEIL-LSMISNSCLSKTTHTTYDALIE-- 223
+ G+ + L + + +EA ++ M+ CL T Y+ LI+
Sbjct: 322 LAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP--TVGVYNVLIKGL 379
Query: 224 --------------------NCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKP 263
+C NE ++ LV G G EA++ + ML +H P
Sbjct: 380 CDDGKSMEAVGYLKKMSKQVSCVANE-ETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 264 DGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVPH 299
Y+ +I C +A MV VP
Sbjct: 439 GVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPE 474
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 118/301 (39%), Gaps = 47/301 (15%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
+Y +INA+C G + ++ ++ N +PS VTY L G GR+ +A
Sbjct: 218 SYNQIINAHCDEGNVDEALEVYRHILANAPF------APSSVTYRHLTKGLVQAGRIGDA 271
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
+LR M G + D+ YN +I G+ + + KA E DE L+ + VY+ ++
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEF---FDE---LKSKCTVYDGIVN 325
Query: 139 GLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAK 198
++ M + +G+ ++A R + + T +V + K + EA
Sbjct: 326 --------ATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAW 377
Query: 199 EILLSMISNSCLSKTTHTTYDA---LIENC--------SNNEFKSL-------------- 233
+ M+ N D ++ C + N FK +
Sbjct: 378 ALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYL 437
Query: 234 --VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+V F +G+++EA R + + D + +I + + + +D A M RM
Sbjct: 438 GYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRM 497
Query: 292 V 292
V
Sbjct: 498 V 498
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRG-MPEMGLSPDAVSYNIVISGFCRIREPGKAYE 115
P++V+YN +I +C G V+EAL + R + +P +V+Y + G + G A
Sbjct: 214 PNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAAS 273
Query: 116 LKMEMDEKRILRMEEVVYESLMQG-LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGY 174
L EM L +G +D Y++L+ YL GD +KA E+
Sbjct: 274 LLREM---------------LSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCT 318
Query: 175 LSESVTESVFINGLSKKARTREAKEILLSMI 205
+ + + + F+ +K +EA E S++
Sbjct: 319 VYDGIVNATFMEYWFEKGNDKEAMESYRSLL 349
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 111/282 (39%), Gaps = 42/282 (14%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +L+NA+ G K + +Q+ +G+ PD + YNAL+ Y G A
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD-------VYVYNALMESYSRAGYPYGA 375
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
I M MG PD SYNI++ + R A E V+E + +
Sbjct: 376 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA----------------EAVFEEMKR 419
Query: 139 -GLSDE-DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
G++ ++ L++ Y D+ K + +E++ +G ++ + +N + + +
Sbjct: 420 LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTK 479
Query: 197 AKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTM 256
++IL M + C + +TY+ LI F R+ L E +
Sbjct: 480 MEKILAEMENGPCTADI--STYNILINIYGKAGFLE--------RIEELFVE-------L 522
Query: 257 LHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
N +PD + I + R K K ++ M+ G P
Sbjct: 523 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAP 564
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 42/234 (17%)
Query: 90 LSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSL 149
PD + +N++I + + + +A L +++ E R + ED Y+ L
Sbjct: 173 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV--------------PTEDTYALL 218
Query: 150 MNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF---INGLSK-KARTREAKEILLSMI 205
+ Y G +E+A ++ E+ + +++ +V+ I GL K K T EA ++ M
Sbjct: 219 IKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMK 278
Query: 206 SNSCLSKTTHTTYDALIE---------------------NCSNNEFKSLVELVKGFRMRG 244
+ C K T TY+ +I C N + LV F G
Sbjct: 279 RDRC--KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPN-ICTYTALVNAFAREG 335
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
L +A + + +PD VYN L+ + R A +++ M H G P
Sbjct: 336 LCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 389
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 42/259 (16%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE- 115
P Y+ LI G+ A+ + M G PDA YN +I+ R+ KA E
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 116 LKMEMDE-KRILRMEE--VVYESLMQGLSDE---DAYSSLMNDYLAQGDMEKAYILDREI 169
++ +D+ K I R + V Y L++ + D ++L D DM +
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDL----DMS-------PV 239
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNN 228
+ D Y V ++ NG+ K E + +L M SN C K T++ LI++
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIK-----EMEAVLTRMRSNEC--KPDIITFNVLIDSYGKKQ 292
Query: 229 EFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
EF+ + + K +++ KP +N +I+ + + + +DKA ++
Sbjct: 293 EFEKMEQTFK----------------SLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 289 TRMVHYGFVPHMFSVLALI 307
+M ++P + +I
Sbjct: 337 KKMNDMNYIPSFITYECMI 355
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 119/311 (38%), Gaps = 53/311 (17%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
Y +L+NA+ G K + +Q+ +G+ PD + YNAL+ Y G A
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD-------VYVYNALMESYSRAGYPYGA 353
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
I M MG PD SYNI++ + R A E V+E + +
Sbjct: 354 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA----------------EAVFEEMKR 397
Query: 139 -GLSDE-DAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTRE 196
G++ ++ L++ Y D+ K + +E++ +G ++ + +N + + +
Sbjct: 398 LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTK 457
Query: 197 AKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELV------KGFR--------- 241
++IL M + C + +TY+ LI F +E + K FR
Sbjct: 458 MEKILAEMENGPCTADI--STYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSR 515
Query: 242 -----MRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG- 295
+ L + + M+ PDGG L+ C + + R +H G
Sbjct: 516 IGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL-SACSSEEQVEQVTSVLRTMHKGV 574
Query: 296 ----FVPHMFS 302
VP + +
Sbjct: 575 TVSSLVPKLMA 585
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 42/234 (17%)
Query: 90 LSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSL 149
PD + +N++I + + + +A L +++ E R + ED Y+ L
Sbjct: 151 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV--------------PTEDTYALL 196
Query: 150 MNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF---INGLSK-KARTREAKEILLSMI 205
+ Y G +E+A ++ E+ + +++ +V+ I GL K K T EA ++ M
Sbjct: 197 IKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMK 256
Query: 206 SNSCLSKTTHTTYDALIE---------------------NCSNNEFKSLVELVKGFRMRG 244
+ C K T TY+ +I C N + LV F G
Sbjct: 257 RDRC--KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPN-ICTYTALVNAFAREG 313
Query: 245 LVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
L +A + + +PD VYN L+ + R A +++ M H G P
Sbjct: 314 LCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 367
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 42/259 (16%)
Query: 57 PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE- 115
P Y+ LI G+ A+ + M G PDA YN +I+ R+ KA E
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 116 LKMEMDE-KRILRMEE--VVYESLMQGLSDE---DAYSSLMNDYLAQGDMEKAYILDREI 169
++ +D+ K I R + V Y L++ + D ++L D DM +
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDL----DMS-------PV 239
Query: 170 AHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNN 228
+ D Y V ++ NG+ K E + +L M SN C K T++ LI++
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIK-----EMEAVLTRMRSNEC--KPDIITFNVLIDSYGKKQ 292
Query: 229 EFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
EF+ + + K +++ KP +N +I+ + + + +DKA ++
Sbjct: 293 EFEKMEQTFK----------------SLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 289 TRMVHYGFVPHMFSVLALI 307
+M ++P + +I
Sbjct: 337 KKMNDMNYIPSFITYECMI 355
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 116/289 (40%), Gaps = 32/289 (11%)
Query: 21 FSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALG 80
SL++ Y G+ + ++ PD + S++ +N LI GYC + A
Sbjct: 165 LSLVDMYAKTGQLKHAFQVFEES------PDRIK-KESILIWNVLINGYCRAKDMHMATT 217
Query: 81 ILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGL 140
+ R MPE ++ S++ +I G+ E +A +L M EK + V + +L+ G
Sbjct: 218 LFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNV-----VSWTTLINGF 268
Query: 141 SDEDAYSSLMNDY---LAQGDMEKAYILDREI---AHDGYLSESVTESVFI--NGLSKKA 192
S Y + ++ Y L +G Y + + + G L + +I NG+
Sbjct: 269 SQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIK--- 325
Query: 193 RTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARA 252
R L+ M + T + N ++ + S +++G+ + G +A +
Sbjct: 326 LDRAIGTALVDMYAKCGELDCAATVF----SNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM-VHYGFVPHM 300
M++ KPD V+ ++ VD N + M + Y P +
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTL 430
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 117/314 (37%), Gaps = 46/314 (14%)
Query: 9 DEGTYSSLFNAYFS---LINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
+EG+ F + ++ L+ + C + K N+ + M+ G+ YN
Sbjct: 366 EEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRK-------EGADRTRIYNIY 418
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
+ G C + E L +L M + PD + N VI+G C++ A ++ +M +
Sbjct: 419 LRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKF 478
Query: 126 LRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAY-ILDREIAHDGYLSESVTESVF 184
+ V ++M GL LAQG E+A +L+R + + V +
Sbjct: 479 CAPDAVTLNTVMCGL-------------LAQGRAEEALDVLNRVMPENKIKPGVVAYNAV 525
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIEN-CSNNEFKSL---------- 233
I GL K + EA + + S + + TTY +I+ C N+
Sbjct: 526 IRGLFKLHKGDEAMSVFGQLEKASVTADS--TTYAIIIDGLCVTNKVDMAKKFWDDVIWP 583
Query: 234 ---------VELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKA 284
+KG G +S+A + P+ YN +I E R +A
Sbjct: 584 SGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREA 643
Query: 285 YNMYTRMVHYGFVP 298
Y + M G P
Sbjct: 644 YQILEEMRKNGQAP 657
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 108/282 (38%), Gaps = 79/282 (28%)
Query: 4 RGLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGS------- 56
RG PD SS+ I++ C G F + + +G +PD T +
Sbjct: 84 RGYRPDSLNLSSV-------IHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLL 136
Query: 57 -----------------------PSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPD 93
PSL YN L+ C + RV +A ++ M G PD
Sbjct: 137 YSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPD 196
Query: 94 AVSYNIVISGFCRIREPGKAYELKMEMDEKRI-----------------LRMEEV----- 131
V++ +I G+C IRE A+++ DE R+ L+M +V
Sbjct: 197 VVTFTTLIGGYCEIRELEVAHKV---FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRK 253
Query: 132 VYESLMQGLSDED-------AYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESV- 183
+ + L + + +E A+++L++ +G + EIA + L ESV
Sbjct: 254 LMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIF----EIAENMSLCESVNVEFA 309
Query: 184 ---FINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
I+ L + R A I+ M S K T+Y+A+I
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGL--KPRRTSYNAII 349
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 130/337 (38%), Gaps = 68/337 (20%)
Query: 5 GLSPDEGTYSSLFNAYF--------SLINAYCLGGEFS----KVSNLHDQMIHNGVLP-- 50
GL P + SSL A I+ Y L + + L D I G LP
Sbjct: 220 GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA 279
Query: 51 ----DFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR 106
D + + ++V +N+L+ G + +++A ++ M + G+ PDA+++N + SG+
Sbjct: 280 RMVFDMMD-AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYAT 338
Query: 107 IREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILD 166
+ +P KA ++ +M EK + V + ++ G S G+ A +
Sbjct: 339 LGKPEKALDVIGKMKEKGVAP-NVVSWTAIFSGCSK-------------NGNFRNALKVF 384
Query: 167 REIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENC- 225
++ +G + T S + L + KE + CL K + DA +
Sbjct: 385 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE-----VHGFCLRK--NLICDAYVATAL 437
Query: 226 -----SNNEFKSLVELVKGFRMRGLVS---------------EAARAHDTMLHGNHKPDG 265
+ + +S +E+ G + + L S E A ML +PD
Sbjct: 438 VDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDA 497
Query: 266 GVYNFLIVEHCRCKN---VDKAYNMYTRM-VHYGFVP 298
+ ++ CKN V + + + M YG +P
Sbjct: 498 ITFTSVL---SVCKNSGLVQEGWKYFDLMRSRYGIIP 531
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 104/251 (41%), Gaps = 39/251 (15%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCR--IREPGKAYE 115
+L ++N+++ Y LG V++A+G+L M GL PD V++N ++SG+ + + A
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 116 LKMEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYL 175
+M++ L+ SL+Q +++ +L G YIL ++ +D Y+
Sbjct: 214 KRMQIAG---LKPSTSSISSLLQAVAEP--------GHLKLGKAIHGYILRNQLWYDVYV 262
Query: 176 SESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVE 235
E+ I+ K A+ + M + + ++ +
Sbjct: 263 -----ETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNS--------------------- 296
Query: 236 LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYG 295
LV G L+ +A M KPD +N L + +KA ++ +M G
Sbjct: 297 LVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG 356
Query: 296 FVPHMFSVLAL 306
P++ S A+
Sbjct: 357 VAPNVVSWTAI 367
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 37/233 (15%)
Query: 58 SLVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
SL T+N++I GY L + EEA +LR M G P++++ ++ RI E
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 118 MEMDEKRILRMEEVVYESL------------------MQGLSDEDAYSSLMNDYLAQGDM 159
+ ++ + +++ SL + DE Y+SL++ Y QG+
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEG 464
Query: 160 EKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYD 219
A L +E+ G + VT ++ S E + + + M Y
Sbjct: 465 GVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKM----------QCEYG 514
Query: 220 ALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLI 272
I C + F +V+L G A+A D + + +KP G + L+
Sbjct: 515 --IRPCLQH-FSCMVDLY------GRAGFLAKAKDIIHNMPYKPSGATWATLL 558
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 110/272 (40%), Gaps = 50/272 (18%)
Query: 22 SLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGI 81
S++N YC +L DQM +V++N +I GY +G + E L +
Sbjct: 184 SMLNLYCKCDHVGDAKDLFDQMEQR-----------DMVSWNTMISGYASVGNMSEILKL 232
Query: 82 LRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLS 141
L M GL PD ++ G + + M + L M +++ +++
Sbjct: 233 LYRMRGDGLRPDQQTF-------------GASLSVSGTMCD---LEMGRMLHCQIVKTGF 276
Query: 142 DEDAY--SSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
D D + ++L+ YL G E +Y + I + + V +V I+GL + R +A
Sbjct: 277 DVDMHLKTALITMYLKCGKEEASYRVLETIPN----KDVVCWTVMISGLMRLGRAEKALI 332
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+ + ++++ S+ +++ +V G A H +L
Sbjct: 333 V-----------------FSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRM 291
+ D N LI + +C ++DK+ ++ RM
Sbjct: 376 GYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 116/276 (42%), Gaps = 45/276 (16%)
Query: 31 GEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEALGILRGMPEMGL 90
G F +++H ++ +G D +P+L N+LI Y G ++++L I M E
Sbjct: 360 GSFDLGASVHGYVLRHGYTLD----TPAL---NSLITMYAKCGHLDKSLVIFERMNE--- 409
Query: 91 SPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQGLSDEDA--YSS 148
D VS+N +ISG+ + + KA L EM K + +++ SL+Q S A
Sbjct: 410 -RDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGK 468
Query: 149 LMNDYLAQGDMEKAYILDREI----AHDGYLSES------------VTESVFINGLSKKA 192
L++ + + + ++D + + GYL + V+ + I G
Sbjct: 469 LIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHG 528
Query: 193 RTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARA 252
+ A EI + + + H + A++ +CS+N G +GL ++
Sbjct: 529 KGDIALEIYSEFLHSG--MEPNHVIFLAVLSSCSHN----------GMVQQGLKIFSSMV 576
Query: 253 HDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMY 288
D + NH+ V + L CR K ++ A+ Y
Sbjct: 577 RDFGVEPNHEHLACVVDLL----CRAKRIEDAFKFY 608
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 113/292 (38%), Gaps = 47/292 (16%)
Query: 6 LSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNAL 65
+SP EG +F Y S++ V ++ +M+ GV SP+ T NA
Sbjct: 347 ISPLEGCELEVFR-YNSMVFQLLKENNLDGVYDILTEMMVRGV-------SPNKKTMNAA 398
Query: 66 IYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYE-LKMEMDEKR 124
+ +C G V+EAL + R E+G +P A+SYN +I C +AY+ LK +D
Sbjct: 399 LCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGH 458
Query: 125 ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVF 184
L +S+L N +G + A L A L + +
Sbjct: 459 FL---------------GGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKI 503
Query: 185 INGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKG--FRM 242
I+ L + +A ++ N +K+ T FK L+ G M
Sbjct: 504 ISALCDVGKVEDA------LMINELFNKSGVDT-----------SFKMFTSLIYGSITLM 546
Query: 243 RGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHY 294
RG + AA+ M + P +Y +I C C+ N +T ++ +
Sbjct: 547 RGDI--AAKLIIRMQEKGYTPTRSLYRNVI--QCVCEMESGEKNFFTTLLKF 594
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 2 LWR---GLSPDEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPS 58
LWR GL +G SS+ L+ Y G+ NL D+M PD +
Sbjct: 44 LWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM------PD-----RN 92
Query: 59 LVTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKM 118
++N +I GY G +L MPE D S+N+V+SGF + E A L
Sbjct: 93 YFSWNTMIEGYMNSGEKGTSLRFFDMMPE----RDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 119 EMDEKRILRMEEVVYESLMQGLSDE 143
M EK ++ + +++ ++ G ++E
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEE 173
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEA 78
A SLI+ Y G+F +V N I NG +FV V NA+I YC G +++A
Sbjct: 162 AVSSLIHMYSKCGKFKEVCN-----IFNGSCVEFVDS----VARNAMIAAYCREGDIDKA 212
Query: 79 LGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQ 138
L + PE+ D +S+N +I+G+ + +A ++ + M+E L+ +E + +++
Sbjct: 213 LSVFWRNPELN---DTISWNTLIAGYAQNGYEEEALKMAVSMEENG-LKWDEHSFGAVLN 268
Query: 139 GLS 141
LS
Sbjct: 269 VLS 271
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 44/253 (17%)
Query: 60 VTYNALIYGYCFLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKME 119
V++ +I GY LG V+ A + R M + D + Y+ +I+ + + +P A +L +
Sbjct: 264 VSWITMISGYTKLGDVQSAEELFRLMSK----KDKLVYDAMIACYTQNGKPKDALKLFAQ 319
Query: 120 MDEKR-ILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSES 178
M E+ ++ +E+ S++ A S L N G ++YI + I D LS S
Sbjct: 320 MLERNSYIQPDEITLSSVVS------ANSQLGNTSF--GTWVESYITEHGIKIDDLLSTS 371
Query: 179 VTESVFINGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALIENC--------SNNEF 230
+ + G KA M SN L+K +Y A+I C +N+ F
Sbjct: 372 LIDLYMKGGDFAKA---------FKMFSN--LNKKDTVSYSAMIMGCGINGMATEANSLF 420
Query: 231 KSLVE------------LVKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRC 278
+++E L+ + GLV E + ++M N +P Y ++ R
Sbjct: 421 TAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRA 480
Query: 279 KNVDKAYNMYTRM 291
+++AY + M
Sbjct: 481 GRLEEAYELIKSM 493
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 19 AYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRV-EE 77
A+ +++ AY G+ + + +M+ +GV SP+ TY+ LI G G+ ++
Sbjct: 234 AHTAIVEAYANAGQAKETLKVFMRMLASGV-------SPNAYTYSVLIKGLAADGKTHKD 286
Query: 78 ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESL 136
A L M G+SP+A +Y V F R + A EL EM K + E+ V E+L
Sbjct: 287 AKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREAL 345
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 25/216 (11%)
Query: 9 DEGTYSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYG 68
D+ ++ A+ L+ A C G K + + P V G +N ++ G
Sbjct: 216 DKFKHTPYDEAFQGLLCALCRHGHIEKAEEF--MLASKKLFPVDVEG------FNVILNG 267
Query: 69 YC-FLGRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILR 127
+C V EA I R M ++P+ SY+ +IS F ++ + L EM +KR L
Sbjct: 268 WCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEM-KKRGLA 326
Query: 128 MEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFING 187
VY SL+ L+ ED + M L +++ +G +SVT + I
Sbjct: 327 PGIEVYNSLVYVLTREDCFDEAMK-------------LMKKLNEEGLKPDSVTYNSMIRP 373
Query: 188 LSKKARTREAKEILLSMISNSCLSKTTHTTYDALIE 223
L + + A+ +L +MIS + LS T T+ A +E
Sbjct: 374 LCEAGKLDVARNVLATMISEN-LSPTV-DTFHAFLE 407
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 37/253 (14%)
Query: 61 TYNALIYGYCFLGRVEE---ALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELK 117
T + L+ Y LG+ +E ++RG + + SY + F R+ +A EL
Sbjct: 308 TLDILMILYGRLGKEKELARTWNVIRGFHHV----RSKSYLLATEAFARVGNLDRAEELW 363
Query: 118 MEMDEKRILRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSE 177
+EM ++GL + + ++SL++ Y G +EKA + RE+ +G+
Sbjct: 364 LEMKN--------------VKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPN 409
Query: 178 SVTESVFINGLSKKARTREA-KEILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVEL 236
S+T G +K +EA K I + + + S + T + ++ + +
Sbjct: 410 SITYRHLALGCAKAKLMKEALKNIEMGLNLKTSKSIGSSTPW-----------LETTLSI 458
Query: 237 VKGFRMRGLVSEAARAHDTMLHGNHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGF 296
++ F +G V + + + + + + VYN L + + K D N++ RMV G
Sbjct: 459 IECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFKAYVKAKVYDP--NLFKRMVLGGA 516
Query: 297 VP--HMFSVLALI 307
P +S+L L+
Sbjct: 517 RPDAESYSLLKLV 529
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 32/168 (19%)
Query: 17 FNAYFSLINAYCLGGEFSKVSNLHDQMI--HNGVLPDFVTGSPSLVTYNALIYGYCFLGR 74
FNA L+NA F KV L D++ +N ++PD ++Y LI YC G
Sbjct: 140 FNA---LLNACLHSKNFDKVPQLFDEIPQRYNKIIPD-------KISYGILIKSYCDSGT 189
Query: 75 VEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEK----------- 123
E+A+ I+R M G+ +++ ++S + E A L EM +K
Sbjct: 190 PEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNV 249
Query: 124 RIL--------RMEEVVYESLMQGLS-DEDAYSSLMNDYLAQGDMEKA 162
RI+ R++E++ E GL D +Y+ LM Y +G +++A
Sbjct: 250 RIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEA 297
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 26/217 (11%)
Query: 8 PDEGTYSSLFNAYFSL-INAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALI 66
P TY LF A N+Y V +L QM+ +G+ PD + N L+
Sbjct: 243 PTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPD-------VFALNCLV 295
Query: 67 YGYCFLGRVEEALGILRGMPEM-GLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRI 125
GY V +AL I M + P++ +Y+ +I G C A EL EM K
Sbjct: 296 KGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGF 355
Query: 126 LRMEEVVYESLMQGLSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFI 185
+ + +Y+SL+N + G+++ A E+ +G + + ++ +
Sbjct: 356 V--------------PNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLV 401
Query: 186 NGLSKKARTREAKEILLSMISNSCLSKTTHTTYDALI 222
+ +K + EA LL M+ L +YD L+
Sbjct: 402 DESCRKGKYDEATR-LLEMLREKQL--VDRDSYDKLV 435
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 13 YSSLFNAYFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFL 72
+S AY +L++AY + K ++ +M + T P TYN +I Y
Sbjct: 764 FSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKS-------TSGPDHYTYNIMINIYGEQ 816
Query: 73 GRVEEALGILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVV 132
G ++E +L+ + E GL PD SYN +I + +A L EM + I+ ++V
Sbjct: 817 GWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIP-DKVT 875
Query: 133 YESLMQGLSDEDAY 146
Y +L+ L D +
Sbjct: 876 YTNLVTALRRNDEF 889
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 102/279 (36%), Gaps = 35/279 (12%)
Query: 20 YFSLINAYCLGGEFSKVSNLHDQMIHNGVLPDFVTGSPSLVTYNALIYGYCFLGRVEEAL 79
Y L + G +F + +L ++M+ + G S YN +I ++E A
Sbjct: 208 YVVLFDGLNQGRDFVGIQSLFEEMVQDSS----SHGDLSFNAYNQVIQYLAKAEKLEVAF 263
Query: 80 GILRGMPEMGLSPDAVSYNIVISGFCRIREPGKAYELKMEMDEKRILRMEEVVYESLMQG 139
+ E G D +YN ++ F P KA+E+ M++ +SL+ G
Sbjct: 264 CCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKT----------DSLLDG 313
Query: 140 LSDEDAYSSLMNDYLAQGDMEKAYILDREIAHDGYLSESVTESVFINGLSKKARTREAKE 199
Y ++ G ++ A+ L +++ S ++ + K R + +
Sbjct: 314 ----STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMK 369
Query: 200 ILLSMISNSCLSKTTHTTYDALIENCSNNEFKSLVELVKGFRMRGLVSEAARAHDTMLHG 259
+ + M T V L+ + G + A R D M
Sbjct: 370 VYMEMQGFGHRPSATM-----------------FVSLIDSYAKAGKLDTALRLWDEMKKS 412
Query: 260 NHKPDGGVYNFLIVEHCRCKNVDKAYNMYTRMVHYGFVP 298
+P+ G+Y +I H + ++ A ++ M GF+P
Sbjct: 413 GFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP 451