Miyakogusa Predicted Gene
- Lj3g3v3337930.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3337930.1 Non Chatacterized Hit- tr|D7U5P0|D7U5P0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.25,1e-18,ZF_RING_2,Zinc finger, RING-type; RING/U-box,NULL;
seg,NULL; RING FINGER PROTEIN 6/12/38,NULL; no
de,NODE_45191_length_2446_cov_31.854048.path1.1
(400 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 185 5e-47
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 185 5e-47
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 85 9e-17
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 85 9e-17
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 84 1e-16
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 84 1e-16
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 84 2e-16
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 84 2e-16
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 83 4e-16
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 82 8e-16
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 82 8e-16
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 82 9e-16
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 81 1e-15
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 81 1e-15
AT2G47560.1 | Symbols: | RING/U-box superfamily protein | chr2:... 80 2e-15
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 80 3e-15
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 80 4e-15
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 79 4e-15
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 79 4e-15
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 79 7e-15
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 78 1e-14
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 78 1e-14
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 77 1e-14
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 77 1e-14
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 77 2e-14
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 77 3e-14
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 77 3e-14
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 76 3e-14
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 76 4e-14
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 75 7e-14
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 75 7e-14
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 74 1e-13
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 74 2e-13
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 73 3e-13
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 72 5e-13
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 72 6e-13
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 72 6e-13
AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 | ch... 72 7e-13
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 72 8e-13
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 72 8e-13
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 72 8e-13
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 72 9e-13
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 71 1e-12
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 71 1e-12
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 71 2e-12
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 70 2e-12
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 70 2e-12
AT2G46493.1 | Symbols: | RING/U-box superfamily protein | chr2:... 70 3e-12
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 69 4e-12
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 69 4e-12
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 69 5e-12
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 69 5e-12
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 69 6e-12
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 69 7e-12
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 68 1e-11
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 68 1e-11
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 67 2e-11
AT3G61550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 67 2e-11
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 67 2e-11
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 67 3e-11
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 66 4e-11
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 66 5e-11
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 66 5e-11
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 65 6e-11
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 65 7e-11
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 65 7e-11
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 65 7e-11
AT2G46495.1 | Symbols: | RING/U-box superfamily protein | chr2:... 65 8e-11
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 65 9e-11
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 65 9e-11
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 1e-10
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 2e-10
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 64 2e-10
AT4G17920.1 | Symbols: | RING/U-box superfamily protein | chr4:... 63 3e-10
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ... 63 4e-10
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 62 5e-10
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 62 7e-10
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 8e-10
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 62 8e-10
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 8e-10
AT4G38140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 62 9e-10
AT2G46494.1 | Symbols: | RING/U-box superfamily protein | chr2:... 61 1e-09
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 61 1e-09
AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein | ch... 61 1e-09
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 61 2e-09
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 60 2e-09
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 60 2e-09
AT3G60966.1 | Symbols: | RING/U-box superfamily protein | chr3:... 60 2e-09
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 4e-09
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 6e-09
AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 59 7e-09
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 1e-08
AT2G34000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 1e-08
AT2G28920.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 2e-08
AT3G11110.1 | Symbols: | RING/U-box superfamily protein | chr3:... 57 2e-08
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 3e-08
AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein | ch... 56 5e-08
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 7e-08
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 7e-08
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 55 7e-08
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 7e-08
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 55 8e-08
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 55 8e-08
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 8e-08
AT3G43430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 8e-08
AT4G17245.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 8e-08
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 55 1e-07
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 55 1e-07
AT4G30370.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 1e-07
AT1G51930.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 1e-07
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 1e-07
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 1e-07
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 1e-07
AT1G63840.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 2e-07
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 54 3e-07
AT5G52150.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 3e-07
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 53 3e-07
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 3e-07
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 4e-07
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 53 4e-07
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 4e-07
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 4e-07
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 53 4e-07
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 4e-07
AT5G20885.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 5e-07
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 53 5e-07
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 5e-07
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 52 5e-07
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 5e-07
AT5G41400.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 5e-07
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 5e-07
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 52 6e-07
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 6e-07
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 52 6e-07
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 7e-07
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 52 8e-07
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 52 8e-07
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 8e-07
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 9e-07
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 1e-06
AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2... 51 1e-06
AT5G37250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 51 2e-06
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 51 2e-06
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 51 2e-06
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 3e-06
AT5G37270.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 50 3e-06
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 3e-06
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 50 3e-06
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 3e-06
AT4G00305.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 4e-06
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 50 4e-06
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 49 4e-06
AT5G41440.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 5e-06
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 49 5e-06
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 49 5e-06
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 5e-06
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 5e-06
AT2G37150.2 | Symbols: | RING/U-box superfamily protein | chr2:... 49 5e-06
AT2G37150.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 5e-06
AT5G37230.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 5e-06
AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A | chr2:1656750... 49 5e-06
AT2G37150.3 | Symbols: | RING/U-box superfamily protein | chr2:... 49 5e-06
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 6e-06
AT3G51325.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 7e-06
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 49 7e-06
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 7e-06
AT5G43200.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 49 8e-06
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 164/323 (50%), Gaps = 50/323 (15%)
Query: 101 DSLQYDSTTLDGPHLFSPYGLDESVIKTIPFSLY-----TPKLHIEESRRS---DCAVCL 152
DS Y S +SPYGLD+SVIKT+P LY T K + ++ + DCAVCL
Sbjct: 109 DSFHYSS--------YSPYGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCL 160
Query: 153 LDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR------AGVLCSESPFTPLMAA 206
L+FE DYVRTLP+C H FHL+CID WLRSH NCPLCR AGVL SPF PLMA
Sbjct: 161 LEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAP 220
Query: 207 RIRPDLDD---HAIL---HFDPTRSDLE--AYSLSPLPEITPCIDDHSPXXXXXXXXXXX 258
RIRP LDD +AI+ P+RS+ A + EI +++ S
Sbjct: 221 RIRPSLDDEENNAIIIRGEITPSRSNWNTIAADTTNDQEIRASVEEQSSPAISRFRE--- 277
Query: 259 XXFLLKRSYSFGFERSLASERMVVDTATASPWXXXXXXXXXXXXXXXXPFGSL-GKTRVF 317
LKRSYSF ER SER+ ++ AT SPW PFG+L K+RVF
Sbjct: 278 ----LKRSYSFECERESESERVTMEPATVSPW----RYRRSTWNKRQSPFGNLISKSRVF 329
Query: 318 SFRYYRGMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMFLRSSATAMTAGV 377
SFRYYR K PMF R++
Sbjct: 330 SFRYYRSTK-SPFFRRRSSAGVFYPISERIPATGSSSRRTKSMTSPMFFRTAP------- 381
Query: 378 FSSSRLRCGDPEALLSPERFSRR 400
SSSRLRCGDPEALLSPER+ RR
Sbjct: 382 HSSSRLRCGDPEALLSPERWRRR 404
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 164/323 (50%), Gaps = 50/323 (15%)
Query: 101 DSLQYDSTTLDGPHLFSPYGLDESVIKTIPFSLY-----TPKLHIEESRRS---DCAVCL 152
DS Y S +SPYGLD+SVIKT+P LY T K + ++ + DCAVCL
Sbjct: 109 DSFHYSS--------YSPYGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCL 160
Query: 153 LDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR------AGVLCSESPFTPLMAA 206
L+FE DYVRTLP+C H FHL+CID WLRSH NCPLCR AGVL SPF PLMA
Sbjct: 161 LEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAP 220
Query: 207 RIRPDLDD---HAIL---HFDPTRSDLE--AYSLSPLPEITPCIDDHSPXXXXXXXXXXX 258
RIRP LDD +AI+ P+RS+ A + EI +++ S
Sbjct: 221 RIRPSLDDEENNAIIIRGEITPSRSNWNTIAADTTNDQEIRASVEEQSSPAISRFRE--- 277
Query: 259 XXFLLKRSYSFGFERSLASERMVVDTATASPWXXXXXXXXXXXXXXXXPFGSL-GKTRVF 317
LKRSYSF ER SER+ ++ AT SPW PFG+L K+RVF
Sbjct: 278 ----LKRSYSFECERESESERVTMEPATVSPW----RYRRSTWNKRQSPFGNLISKSRVF 329
Query: 318 SFRYYRGMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMFLRSSATAMTAGV 377
SFRYYR K PMF R++
Sbjct: 330 SFRYYRSTK-SPFFRRRSSAGVFYPISERIPATGSSSRRTKSMTSPMFFRTAP------- 381
Query: 378 FSSSRLRCGDPEALLSPERFSRR 400
SSSRLRCGDPEALLSPER+ RR
Sbjct: 382 HSSSRLRCGDPEALLSPERWRRR 404
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GL+ES+IK+I Y + SDC+VCL +FE + +R LP C+H FHL CID W
Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDG--SDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTW 173
Query: 180 LRSHANCPLCRAGVLCSESP 199
L+SH+NCPLCRA V +P
Sbjct: 174 LKSHSNCPLCRAFVTGVNNP 193
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 12/91 (13%)
Query: 120 GLDESVIKTIPF-----------SLYTPKLHIEESRRS-DCAVCLLDFEHQDYVRTLPIC 167
GLDESVI+ IP ++T + EE +RS +C+VCL +F+ ++ +R +P C
Sbjct: 98 GLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNC 157
Query: 168 SHTFHLDCIDAWLRSHANCPLCRAGVLCSES 198
SH FH+DCID WL+++ANCPLCR V C S
Sbjct: 158 SHLFHIDCIDVWLQNNANCPLCRTRVSCDTS 188
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 115 LFSPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLD 174
L GL +S+I +I Y + E R+DC VCL +FE + +R LP C+H FH+
Sbjct: 146 LIRTTGLQQSIINSITICNYKRGDGLIE--RTDCPVCLNEFEEDESLRLLPKCNHAFHIS 203
Query: 175 CIDAWLRSHANCPLCRAGV 193
CID WL SH NCPLCRAG+
Sbjct: 204 CIDTWLSSHTNCPLCRAGI 222
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 9/101 (8%)
Query: 115 LFSPY----GLDESVIKTIPFSLYTPKLHI----EESRRS-DCAVCLLDFEHQDYVRTLP 165
++SP+ GLDES I+ IP + + + ++S+ S +C+VCL +F+ + +R +P
Sbjct: 92 IYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIP 151
Query: 166 ICSHTFHLDCIDAWLRSHANCPLCRAGVLCSESPFTPLMAA 206
C H FH+DCID WL+ +ANCPLCR V C S L++A
Sbjct: 152 NCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISA 192
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 121 LDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL 180
LDES+IK+I Y ES SDC+VCL +F+ + +R LP C+H FH+ CID WL
Sbjct: 134 LDESLIKSITVYKYRKMDGFVES--SDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWL 191
Query: 181 RSHANCPLCRAGVLCS 196
+SH+NCPLCRA ++ S
Sbjct: 192 KSHSNCPLCRAFIVTS 207
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GL+ +VI +I Y+ K + E +DC+VCL +FE ++ +R LP C H FHL CID W
Sbjct: 191 GLNPTVISSIKVCQYSKKDGVVEG--TDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTW 248
Query: 180 LRSHANCPLCRAGVL 194
LRSH NCPLCRA ++
Sbjct: 249 LRSHTNCPLCRAPIV 263
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 121 LDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL 180
LD +V++ IP +Y+ K H ES +C+VCL +FE D R LP C H FH+DCID W
Sbjct: 88 LDPTVLEKIPIFVYSVKTH--ESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWF 145
Query: 181 RSHANCPLCRAGVLCSESPFTPLMAARIRPDL 212
RS ++CPLCRA V ++ P A + P +
Sbjct: 146 RSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSV 177
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%)
Query: 117 SPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCI 176
S GLD+++IK I F + + +DC++CL +F + +R LP C+HTFH+ CI
Sbjct: 124 STAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCI 183
Query: 177 DAWLRSHANCPLCRAGVL 194
D WL+SH+NCPLCRA ++
Sbjct: 184 DRWLKSHSNCPLCRAKII 201
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GLD +VIK++P ++ + H + +CAVCL +FE + R LP C HTFH+DCID W
Sbjct: 94 GLDPNVIKSLPVFTFSDETHKDPI---ECAVCLSEFEESETGRVLPNCQHTFHVDCIDMW 150
Query: 180 LRSHANCPLCRAGVLCSESPFTPLMAARIRP---DLDDHAILHFDPTRS 225
SH+ CPLCR+ ++ S + AAR R +D +L +P+ S
Sbjct: 151 FHSHSTCPLCRS-LVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSS 198
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
G+D+S I T+P Y + ++ + DCAVCL +FE +D +R LP CSH FH+DCID W
Sbjct: 107 GVDQSFIDTLPVFHYKSIIGLK-NYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTW 165
Query: 180 LRSHANCPLCR 190
L SH+ CPLCR
Sbjct: 166 LLSHSTCPLCR 176
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 120 GLDESVIKTIP-FSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GLD +V+++ P F+ + K S+ +CA+CL + E + VR LPIC+H FH+DCID
Sbjct: 95 GLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDT 154
Query: 179 WLRSHANCPLCRAGVLCS------ESPFTPLMAARIRPDLDDHAILHFD 221
WL SHA CP+CR+ + E PL A R DH ++ +
Sbjct: 155 WLYSHATCPVCRSNLTAKSNKPGDEDDGVPLAAMR------DHVVVDIE 197
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 108 TTLDGP--HLFSPY--GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRT 163
T L G LF+ + G+D+S+I T+P Y + ++ S DC VCL +FE +D +R
Sbjct: 83 TALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISP-FDCPVCLCEFETEDKLRL 141
Query: 164 LPICSHTFHLDCIDAWLRSHANCPLCRAGVL 194
LP CSH FH++CID WL SH+ CPLCR+ +L
Sbjct: 142 LPKCSHAFHVECIDTWLLSHSTCPLCRSNLL 172
>AT2G47560.1 | Symbols: | RING/U-box superfamily protein |
chr2:19511934-19512617 REVERSE LENGTH=227
Length = 227
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%)
Query: 121 LDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL 180
LD++V+ IP +Y+ K + +C+VCL +FE +D R LP C H+FH+DCID W
Sbjct: 81 LDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWF 140
Query: 181 RSHANCPLCRAGV 193
RS + CPLCRA V
Sbjct: 141 RSRSTCPLCRAPV 153
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 17/113 (15%)
Query: 117 SPYGLDESVIKTIP---FSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHL 173
+P GL+ S+IK++P FS T +E C+VCL +F+ + R +P C HTFH+
Sbjct: 48 TPGGLNPSIIKSLPIFTFSAVTALFAME------CSVCLSEFKDNESGRVMPNCKHTFHV 101
Query: 174 DCIDAWLRSHANCPLCRAGVLCSESPFTPLMAARIRPDLDDHAILHFDPTRSD 226
DCID W SH++CPLCR+ + PF A ++ +D+ AI DP D
Sbjct: 102 DCIDMWFHSHSSCPLCRSLI----EPF----AGGVKSTMDEVAISISDPVYGD 146
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 120 GLDESVIKTIPFSLY----TPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDC 175
GLD SV++T P LY T KL E +CA+CL +FE + +R LP C H FH C
Sbjct: 99 GLDVSVVETFPTFLYSDVKTQKLGKGEL---ECAICLNEFEDDETLRLLPKCDHVFHPHC 155
Query: 176 IDAWLRSHANCPLCRAGVLCSESPFTPLMAARIRPDLDDHAILHFDPTRSDLEAYSLSPL 235
IDAWL +H CP+CRA + + + PDL+ ++ +P E +P+
Sbjct: 156 IDAWLEAHVTCPVCRANLAEQVAEGESVEPGGTEPDLELQQVV-VNP-----EPVVTAPV 209
Query: 236 PE 237
PE
Sbjct: 210 PE 211
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GLD ++++P YT + R DC +CL DFE + V+ +P C H FH+DC+D W
Sbjct: 115 GLDSQAVRSLPVYRYTKA---AKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTW 171
Query: 180 LRSHANCPLCRAGVLCSE 197
L S+ CPLCR+ L S+
Sbjct: 172 LSSYVTCPLCRSNQLFSD 189
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 114 HLFSPY--GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTF 171
HLF + GLD++ I +P LY + I + DCAVCL +F D +R LP+CSH F
Sbjct: 172 HLFFLHDSGLDQTAIDALPVFLYG-NVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAF 230
Query: 172 HLDCIDAWLRSHANCPLCR 190
HL CID WL S++ CPLCR
Sbjct: 231 HLHCIDTWLLSNSTCPLCR 249
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GLD+++I +P LY +E DCAVCL +F D +R LP CSH FH+DCID W
Sbjct: 118 GLDQALIDALPVFLYKEIKGTKEP--FDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTW 175
Query: 180 LRSHANCPLCRA 191
L S++ CPLCR
Sbjct: 176 LLSNSTCPLCRG 187
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRS-DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GLD S+I+T P Y+ + + + +C+VCL +FE + +R +P C H FH CIDA
Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDA 174
Query: 179 WLRSHANCPLCRAGVL 194
WLRSH CPLCRA ++
Sbjct: 175 WLRSHTTCPLCRADLI 190
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 106 DSTTLDGPHLFSPYGLDESVIKTIPFSLYTPKLHIEESRRS-DCAVCLLDFEHQDYVRTL 164
DS G H SP SV+ ++P ++ S S DCAVCL FE +D +R L
Sbjct: 75 DSRRFSG-HRVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLL 133
Query: 165 PICSHTFHLDCIDAWLRSHANCPLCRAGVLCSESPFTPLMAA 206
P+C H FH DCID WL S+ CPLCR+ + SES +A
Sbjct: 134 PLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLAV 175
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 12/101 (11%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRS-DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GLD++ I+++P ++ ++ S++ DC+VCL FE + +R LP C H FH+ CID
Sbjct: 97 GLDKTAIESLPLFRFSA---LKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQ 153
Query: 179 WLRSHANCPLCR--------AGVLCSESPFTPLMAARIRPD 211
WL HA CPLCR + VL + + F L + IR D
Sbjct: 154 WLEQHATCPLCRDRVSMEEDSSVLTNGNSFRFLNQSEIRED 194
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GL S I +I + I + ++C+VCL +FE + +R LP CSH FHL+CID W
Sbjct: 109 GLHRSAINSITVVGFKKGEGIIDG--TECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTW 166
Query: 180 LRSHANCPLCRAGVLCSESP 199
L SH NCPLCRA VL P
Sbjct: 167 LLSHKNCPLCRAPVLLITEP 186
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
G+ + +K IP Y+P+L + + ++C +CL DF + VR LP C+H FH+ CID W
Sbjct: 88 GIKKRALKVIPVDSYSPELKM---KATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTW 144
Query: 180 LRSHANCPLCRAGVLCSESP 199
L SH++CP CR +L ++P
Sbjct: 145 LLSHSSCPTCRQSLLEHQTP 164
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRS-DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GL++ VI++ P LY+ ++ + +CA+CL +FE Q+ +R +P CSHTFH +CID
Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDV 153
Query: 179 WLRSHANCPLCRAGV 193
WL S + CP+CRA +
Sbjct: 154 WLSSWSTCPVCRANL 168
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 21/120 (17%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRS--------DCAVCLLDFEHQDYVRTLPICSHTF 171
GLD++ I +P Y + DCAVCL +F +D +R LP+CSH F
Sbjct: 107 GLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAF 166
Query: 172 HLDCIDAWLRSHANCPLCRAGVLCSESPFTPLMAARIRPDLDDHAILHFDPTRSDLEAYS 231
HL+CID WL+S++ CPLCR + F+P + ++ + FD R D E +
Sbjct: 167 HLNCIDTWLQSNSTCPLCRGTL------FSPGFSM-------ENPMFDFDDIREDEEGVT 213
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRS-DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GLD I+T P LY+ + + +CAVCL +FE + +R +P C H FH DC+D
Sbjct: 106 GLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDV 165
Query: 179 WLRSHANCPLCRAGVLCSE 197
WL H+ CPLCRA ++ ++
Sbjct: 166 WLSEHSTCPLCRADLVLNQ 184
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 114 HLFSPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHL 173
L + GL + +K IP LY I + + ++C +CL DFE + VR LP C+H FH+
Sbjct: 82 RLAAATGLKKQALKQIPVGLYGS--GIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHV 139
Query: 174 DCIDAWLRSHANCPLCRAGVLCSESPFTPLMAARIRPDL 212
CID WL S ++CP CR +L E P +P+ +R D+
Sbjct: 140 RCIDTWLLSRSSCPTCRQSLLL-EQP-SPMAVSRRDEDM 176
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 15/136 (11%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GL + + + +P ++ + +S+ C+VCL D++ D ++ +P+C HTFH+DCID W
Sbjct: 75 GLSKELREMLPIVVFKESFTVMDSQ---CSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLW 131
Query: 180 LRSHANCPLCRAGVLCSESP----------FTPLMAARIRPDLD--DHAILHFDPTRSDL 227
L SH CPLCR ++ S S +P +P+ + +H ++ P +
Sbjct: 132 LTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQPESEPVNHRVVSTQPESEPV 191
Query: 228 EAYSLSPLPEITPCID 243
+S PE P ++
Sbjct: 192 NHSGVSSQPESQPVVN 207
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRS-DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GLD SVI+T P Y+ + + + +C VCL +FE + +R +P C H FH CIDA
Sbjct: 89 GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDA 148
Query: 179 WLRSHANCPLCRAGVL 194
WLRS CPLCRA ++
Sbjct: 149 WLRSQTTCPLCRANLV 164
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GLD+ I+++PF ++ +++ +C+VCL FE + +R LP C H FH+ CID W
Sbjct: 98 GLDKKAIESLPFFRFSALKGLKQG--LECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQW 155
Query: 180 LRSHANCPLCRAGV 193
L HA CPLCR V
Sbjct: 156 LEQHATCPLCRNRV 169
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 120 GLDESVIKTIPFSLYTP-KLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
G+D+ VI++ P LY+ K + +CA+CL +FE ++ +R +P CSHTFH +CID
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 179 WLRSHANCPLCRAGV 193
WL S + CP+CRA +
Sbjct: 151 WLSSRSTCPVCRANL 165
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GL + + + +P +Y +++S+ C+VCL D++ ++ ++ +P C HTFH++CID W
Sbjct: 86 GLSKDIREMLPVVIYKESFIVKDSQ---CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLW 142
Query: 180 LRSHANCPLCRAGVL 194
L SH CPLCR ++
Sbjct: 143 LTSHTTCPLCRLSLI 157
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRS-DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GL++ ++++ P LY+ ++ + +CA+CL +F ++ +R +P CSHTFH +CID
Sbjct: 94 GLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDV 153
Query: 179 WLRSHANCPLCRAGVLC--SES---PFTPLMAARIRPDLDDHAILHFDPTRSDLEAYSLS 233
WL S + CP CRA + ES P T L D+H++L ++L+ ++L
Sbjct: 154 WLSSQSTCPACRANLSLKPGESYPYPITDLETG--NEQRDEHSLLQLG---TNLDRFTLQ 208
Query: 234 PLPE 237
LPE
Sbjct: 209 -LPE 211
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRS----DCAVCLLDFEHQDYVRTLPICSHTFHLDC 175
GLDE++I + P LY+ ++E R +CAVC+ +FE + +R +P C H FH DC
Sbjct: 67 GLDEAIINSFPTFLYS---EVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADC 123
Query: 176 IDAWLRSHANCPLCRA 191
+ WL H+ CPLCR
Sbjct: 124 VSVWLSDHSTCPLCRV 139
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 120 GLDESVIKTIPFSLYTPK-----LHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLD 174
GL + ++++P S +T EE ++CA+CL DF + +R LP+C H+FH++
Sbjct: 69 GLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVE 128
Query: 175 CIDAWLRSHANCPLCR 190
CID WL S ++CP CR
Sbjct: 129 CIDKWLVSRSSCPSCR 144
>AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 |
chr5:23676906-23677832 REVERSE LENGTH=308
Length = 308
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GLD SVI +IP +Y E+ C +CL +E D+ R L C H FH++CID W
Sbjct: 111 GLDSSVISSIPLFVYEENEEEEDEEEE-CVICLGLWEAGDFGRKLRNCGHGFHVECIDMW 169
Query: 180 LRSHANCPLCRAGVLCSESPFTPLMAA 206
L SH+ CPLCR+ VL + S L A
Sbjct: 170 LSSHSTCPLCRSPVLAAVSDEENLKLA 196
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 103 LQYDSTTLDGPHLFSPY--------GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLD 154
L + T+ G SP GL + V++++P ++P+ E + ++CA+CL +
Sbjct: 59 LAAGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPE-SPESEKFAECAICLAE 117
Query: 155 FEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
F D +R LP C H FH+ CID WL SH++CP CR
Sbjct: 118 FSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCR 153
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GLD VI++ P + + C++CL D+E ++ VR +P C+H FH DC+D W
Sbjct: 66 GLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEW 125
Query: 180 LRSHANCPLCR 190
LR+ A CPLCR
Sbjct: 126 LRTSATCPLCR 136
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GL + + + +P +Y + +++ C+VCL D++ ++ ++ +P C HTFH++CID W
Sbjct: 72 GLSKDIREMLPIVIYKESFTVNDTQ---CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLW 128
Query: 180 LRSHANCPLCRAGVL 194
L SH CPLCR ++
Sbjct: 129 LTSHTTCPLCRLSLI 143
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 120 GLDESVIKTIPFSLYTP-----KLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLD 174
GL E VIK P Y L E S S C++CL D++ D +R LP C+H FH +
Sbjct: 96 GLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDN 155
Query: 175 CIDAWLRSHANCPLCRAGVLCSE--SPFTPLMAARIRPDLD 213
C+D WLR H CP+CR L S +P ++ RP +D
Sbjct: 156 CVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSRRPMMD 196
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 94 PSSAGDVDSLQYDSTTLDGPHLFSPYGLDESVIKTIPFSLYTPKLHIEESRRSD-CAVCL 152
S G VD+ D T+L GL +++ IP T + + S +D C+VCL
Sbjct: 143 QSQMGAVDTAFDDHTSLFDTG--GSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCL 200
Query: 153 LDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
DF+ + VR+LP C H FHL CID WL H +CP+CR
Sbjct: 201 QDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCR 238
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRS-DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GL + VI + P LY+ ++ + +CA+CL +FE ++ +R +P CSH FH CID
Sbjct: 99 GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDV 158
Query: 179 WLRSHANCPLCRAGV 193
WL S + CP+CRA +
Sbjct: 159 WLSSRSTCPVCRASL 173
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 121 LDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL 180
+D+S I +P Y + + SDCAVCL +F +D +R LP CSH FH++CID WL
Sbjct: 96 IDQSFIDALPLLHYKTMIGLRHDL-SDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWL 154
Query: 181 RSHANCPLCR 190
+++ CPLCR
Sbjct: 155 LTNSTCPLCR 164
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 118 PYGLDESVIKTIPFSLYTPKLHIEES-RRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCI 176
P GLD IK+ P +YT IE +C VCL +F+ + +R +P C H FH DC+
Sbjct: 54 PRGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCV 113
Query: 177 DAWLRSHANCPLCRAGVL 194
D WL + CP+CRA V+
Sbjct: 114 DIWLSHSSTCPICRAKVV 131
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSD-CAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GL ++ IP T K +++ S D C+VCL DF+ + VR+LP C H FHL CID
Sbjct: 162 GLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDN 221
Query: 179 WLRSHANCPLCR 190
WL H +CP+CR
Sbjct: 222 WLFRHGSCPMCR 233
>AT2G46493.1 | Symbols: | RING/U-box superfamily protein |
chr2:19080254-19081242 REVERSE LENGTH=184
Length = 184
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 18/102 (17%)
Query: 101 DSLQYDS-----TTLDGP-HLFSPYGLDESVIKTIPFSLYTPKLHIEESRRSD------C 148
DS ++DS T + P + + GLD+S I+T K+ + ESRR C
Sbjct: 85 DSERFDSAIAAATVMQQPREVMARRGLDQSTIETFK------KMELGESRRLSGTNGIVC 138
Query: 149 AVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
+CL ++ ++ VR +P C H FH++CID WL+ H +CPLCR
Sbjct: 139 PICLSEYASKETVRFIPECDHCFHVECIDVWLKIHGSCPLCR 180
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GLDE I++ P LY+ + S CA+CL D++ + +R LP C+H FHL CID W
Sbjct: 121 GLDEDTIQSYPKILYSEAKG--PTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTW 178
Query: 180 LRSHANCPLCRAGVL 194
LR + CP+CR L
Sbjct: 179 LRLNPTCPVCRTSPL 193
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRS-DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GLD I+T P +Y+ + + + +CA+CL +FE + +R LP C H FH CI A
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGA 154
Query: 179 WLRSHANCPLCRAGVLCSESP 199
WL+ H CP+CR L ++P
Sbjct: 155 WLQGHVTCPVCRTN-LAEQTP 174
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Query: 120 GLDESVIKTIPF----SLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDC 175
G+D SVI+++P +L K +E CAVCL FE + +R LP C H FH++C
Sbjct: 66 GIDRSVIESLPVFRFGALSGHKDGLE------CAVCLARFEPTEVLRLLPKCKHAFHVEC 119
Query: 176 IDAWLRSHANCPLCR 190
+D WL +H+ CPLCR
Sbjct: 120 VDTWLDAHSTCPLCR 134
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GL + V++++P Y+P E + +CA+CL +F D +R LP C H FH+ CID W
Sbjct: 77 GLKKKVLRSLPKLTYSPDSPPAE-KLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTW 135
Query: 180 LRSHANCPLCR 190
L SH++CP CR
Sbjct: 136 LGSHSSCPSCR 146
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 136 PKLHIEES--RRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
PK+ I ++ C+VCL DF+ + VR+LP C H FHL CID WLR HA+CPLCR
Sbjct: 162 PKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 218
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 136 PKLHIEES--RRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
PK+ I ++ C+VCL DF+ + VR+LP C H FHL CID WLR HA+CPLCR
Sbjct: 186 PKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 242
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%)
Query: 147 DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGV 193
+CAVCL D D R LP C+H FH+DCID W +SH+ CPLCR V
Sbjct: 119 ECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 13/80 (16%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRR-----SD--CAVCLLDFEHQDYVRTLPICSHTFH 172
GLDES I++ K+ + ESRR +D C +CL ++ ++ VR LP C H FH
Sbjct: 298 GLDESTIESYK------KVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFH 351
Query: 173 LDCIDAWLRSHANCPLCRAG 192
+CIDAWL+ H++CP+CR+
Sbjct: 352 TECIDAWLKLHSSCPVCRSN 371
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
G+ + +K +P Y+P++++ +C +CL DF + +R LP C+H FHL CID W
Sbjct: 103 GIKKKALKMLPVVNYSPEINLP-GVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKW 161
Query: 180 LRSHANCPLCR 190
L H CP CR
Sbjct: 162 LTQHMTCPKCR 172
>AT3G61550.1 | Symbols: | RING/U-box superfamily protein |
chr3:22776444-22777082 FORWARD LENGTH=212
Length = 212
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 120 GLDESVIKTIPFSLYTPKL---------HIEESRRSDCAVCLLDFEHQDYVRTLPICSHT 170
GLD SVI + P +T + H E R + C++CL ++ ++ +R +P C H
Sbjct: 99 GLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHY 158
Query: 171 FHLDCIDAWLRSHANCPLCR 190
FH+ C+DAWL+ + +CP+CR
Sbjct: 159 FHVYCLDAWLKLNGSCPVCR 178
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 117 SPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCI 176
S G+++ ++ P Y+P++++ +C +CL DF + +R LP C H FH+ CI
Sbjct: 106 SNKGINKKALRMFPVVSYSPEMNLP-GLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCI 164
Query: 177 DAWLRSHANCPLCR 190
D WL+ H CP CR
Sbjct: 165 DKWLQQHLTCPKCR 178
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 103 LQYDSTTLDGPHLF----SPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQ 158
+ D++ ++ +L+ GL +S I+ IP Y E +S C++CL D+E
Sbjct: 126 IALDTSYMESSNLYDFNHEKKGLSKSSIQNIPM-FYNRS---EHQTKSSCSICLQDWEEG 181
Query: 159 DYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
+ R L C HTFH++CID WL CP+CR
Sbjct: 182 EVGRKLARCGHTFHMNCIDEWLLRQETCPICR 213
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 12/77 (15%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRR------SDCAVCLLDFEHQDYVRTLPICSHTFHL 173
GLD I++ P K+ + ES+R + CA+CL ++E ++ +RT+P C H FH
Sbjct: 302 GLDGPTIESYP------KIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHA 355
Query: 174 DCIDAWLRSHANCPLCR 190
DCID WL+ + CP+CR
Sbjct: 356 DCIDEWLKLNGTCPVCR 372
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 120 GLDESVIKTIPFSLY-TPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GL + +K P + Y + ++ I + +CA+CL +F + VR LP C+H+FH+ CID
Sbjct: 79 GLKKRELKKFPVAEYGSGEVKIAAT---ECAICLGEFADGERVRVLPPCNHSFHMSCIDT 135
Query: 179 WLRSHANCPLCR 190
WL SH++CP CR
Sbjct: 136 WLVSHSSCPNCR 147
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 117 SPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCI 176
S G+ + ++ P Y+P++++ +C +CL DF + +R LP C+H FH+ CI
Sbjct: 105 SNKGIKKKALRMFPVVSYSPEMNLP-GLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCI 163
Query: 177 DAWLRSHANCPLCR 190
D WL+ H CP CR
Sbjct: 164 DKWLQQHLTCPKCR 177
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 6/63 (9%)
Query: 137 KLHI----EE--SRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
KLH+ EE +R S C VCL +FE ++ + +P+C H FHLDCI WL SH CPLCR
Sbjct: 88 KLHVVLFNEELGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCR 147
Query: 191 AGV 193
+ V
Sbjct: 148 SSV 150
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GLD VI ++P + K + + +CAVCL E +D R LP C H FH+ C+D W
Sbjct: 75 GLDSLVIASLPTFVVGIKNDVAGT---ECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTW 131
Query: 180 LRSHANCPLCRA 191
L + + CP+CR
Sbjct: 132 LTTQSTCPVCRT 143
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GLD +I++ P Y+ +++ ++CA+CL +F +D VR + +C H FH +CID W
Sbjct: 77 GLDPFIIRSFPVFHYSSA--TKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLW 134
Query: 180 LRSHANCPLCR 190
H CP+CR
Sbjct: 135 FELHKTCPVCR 145
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GL+ +VI ++P + S ++CAVCL + QD R LP C H FH+DC+D W
Sbjct: 81 GLNPTVIASLPTFTVGATDGVAASA-TECAVCLSVLKEQDKARELPNCKHIFHVDCVDTW 139
Query: 180 LRSHANCPLCRAGV 193
L + + CP+CR V
Sbjct: 140 LTTCSTCPVCRTEV 153
>AT2G46495.1 | Symbols: | RING/U-box superfamily protein |
chr2:19084134-19085704 REVERSE LENGTH=372
Length = 372
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 13/78 (16%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRR----SD---CAVCLLDFEHQDYVRTLPICSHTFH 172
GLDES+I++ K + ESRR +D C +CL ++ ++ VR +P C H FH
Sbjct: 291 GLDESIIESYK------KTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFH 344
Query: 173 LDCIDAWLRSHANCPLCR 190
+CID WL+ H +CPLCR
Sbjct: 345 SECIDVWLKIHGSCPLCR 362
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 147 DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVLCSE 197
+C++CL + D R LP C+H+FH++CID W +SH+ CP+CR VL E
Sbjct: 126 ECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPE 176
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
G+ V+++IP + K + +C VCL + D R LP C H FH++CID+W
Sbjct: 63 GIKPYVLRSIPIVDFNTK---DFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSW 119
Query: 180 LRSHANCPLCRAGVLCSESPFTPLMAARIRPDLDDH 215
L+S++ CP+CR V +S P + R + +H
Sbjct: 120 LQSNSTCPICRKRVCLKQSRTRPELGGRDKSFNQNH 155
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 12/77 (15%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRR------SDCAVCLLDFEHQDYVRTLPICSHTFHL 173
GLD+S I++ K+ + ESRR C +CL ++ ++ VR +P C H FH+
Sbjct: 225 GLDQSTIESYK------KVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHV 278
Query: 174 DCIDAWLRSHANCPLCR 190
CID WL+ H++CP+CR
Sbjct: 279 QCIDEWLKIHSSCPVCR 295
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 120 GLDESVIKTI-PFSLYTPKLHIEESRRS----DCAVCLLDFEHQDYVRTLPICSHTFHLD 174
GL +SVI+T+ P L H E+ +S +CA+CL + + R P+C H +H
Sbjct: 97 GLKQSVIETLLPKLLVGQGNHEEDEEKSLESRECAICLSGYVVNEECRVFPVCRHIYHAL 156
Query: 175 CIDAWLRSHANCPLCR 190
CIDAWL++H CP CR
Sbjct: 157 CIDAWLKNHLTCPTCR 172
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 125 VIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRS-H 183
V+ +P LYT K E+ S C +CL+++E D +RTLP C H FH C+D WL+ H
Sbjct: 470 VVDLLPIKLYT-KSQSEDP--SQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIH 525
Query: 184 ANCPLCRAGVLCSESP 199
CPLCR G +C P
Sbjct: 526 RVCPLCR-GDICRHDP 540
>AT4G17920.1 | Symbols: | RING/U-box superfamily protein |
chr4:9963221-9964090 REVERSE LENGTH=289
Length = 289
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRS-DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GL+ +I + P Y+ + E + +CA+CLL+F+ +R L C H FH +CID
Sbjct: 81 GLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDL 140
Query: 179 WLRSHANCPLCR 190
W SH CP+CR
Sbjct: 141 WFESHRTCPVCR 152
>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
chr1:11675531-11676529 FORWARD LENGTH=332
Length = 332
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GLD +I++ P Y+ K H + C++CL +F D +R + C+H+FH CID W
Sbjct: 130 GLDSKIIESFPEYPYSVKDHGTDQ----CSICLTEFMDDDTIRLISTCNHSFHTICIDLW 185
Query: 180 LRSHANCPLCR 190
H CP+CR
Sbjct: 186 FEGHKTCPVCR 196
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGV 193
C +CL D + + R+LP C HTFHL C+D WL H +CP+CR V
Sbjct: 176 CTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICRQAV 221
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 113 PHLFSPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFH 172
P + G+ +K+ Y+ +L++ ++CA+CL +F ++ V+ LP C H FH
Sbjct: 97 PVRLTNTGVKRKALKSFQTVSYSTELNLP-GLDTECAICLSEFVAEERVKLLPTCHHGFH 155
Query: 173 LDCIDAWLRSHANCPLCR 190
+ CID WL SH++CP CR
Sbjct: 156 VRCIDKWLSSHSSCPTCR 173
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRS-DCAVCLLDFEHQDYV-RTLPICSHTFHLDCID 177
GL+ +I++ P ++ + E + +CA+CLL+FE + + R L C H FH +CID
Sbjct: 85 GLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECID 144
Query: 178 AWLRSHANCPLCRAGV 193
WL S+ CP+CR +
Sbjct: 145 QWLESNKTCPVCRRNL 160
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 146 SDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
++CA+C+ +F + +R LP+CSH FH+ CID WL S ++CP CR
Sbjct: 111 TECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 120 GLDESVIKTIP-FSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GL +K +P F P + SDC VC F + R LP C H FH C+D
Sbjct: 83 GLSSRFVKKLPQFKFSEPSTYTRYE--SDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDT 140
Query: 179 WLRSHANCPLCRAGV-LCSESP 199
WL + CP+CRA V L E P
Sbjct: 141 WLLKASTCPICRARVRLWEEDP 162
>AT4G38140.1 | Symbols: | RING/U-box superfamily protein |
chr4:17899868-17900305 REVERSE LENGTH=145
Length = 145
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 141 EESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW-LRSHANCPLCRAGVL 194
E+ C +CL++FE +D V LP C+H FH++CI+ W LR H CPLCR+ VL
Sbjct: 55 EKEEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRSFVL 109
>AT2G46494.1 | Symbols: | RING/U-box superfamily protein |
chr2:19082344-19083811 REVERSE LENGTH=362
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Query: 107 STTLDGP-HLFSPYGLDESVIKTIPFSLYTPKLHIEESRRSD------CAVCLLDFEHQD 159
+T + P + + GLD+S I+ + + ESRR C +CL ++ ++
Sbjct: 274 ATVMQQPREVMATRGLDQSTIEKYK------TMELGESRRPPGTNGIVCPICLSEYVSKE 327
Query: 160 YVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
VR +P C H FH CID WL+ H +CPLCR
Sbjct: 328 TVRFIPECDHCFHAKCIDVWLKIHGSCPLCR 358
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 146 SDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGV 193
++C+VCL+ F D +R L C H FH+ CI+ WL+ H NCP+CR V
Sbjct: 140 NECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDV 187
>AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein |
chr3:6614910-6615335 REVERSE LENGTH=141
Length = 141
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 96 SAGDVDSLQYDSTTLDGPHLFSPYGLDESVIKTIP---FSLYTPKLHIEESRRSDCAVCL 152
+ GD D L + S +L H+ G++ SV+ +IP F+ K +IE C VCL
Sbjct: 33 NKGDDDHLIHPSHSL---HVIKATGINPSVLLSIPVVSFNANAFKDNIE------CVVCL 83
Query: 153 LDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGV 193
F +D R LP C+H FH D D WL S CP CR V
Sbjct: 84 SKFIDEDKARVLPSCNHCFHFDFTDTWLHSDYTCPNCRKNV 124
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 125 VIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRS-H 183
V+ +P LYT K E+ S C +CL+++E D +RTLP C H FH C+D WL+ H
Sbjct: 470 VVDLLPIKLYT-KSQSEDP--SQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIH 525
Query: 184 AN-CPLCRAGVLCSESP 199
+ CPLCR G +C P
Sbjct: 526 SRVCPLCR-GDICRHDP 541
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
G+ + ++ P Y+ ++++ +C +CL DF + +R LP C+H FH+ CID W
Sbjct: 108 GIKKKALRMFPVVSYSREMNLP-GIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKW 166
Query: 180 LRSHANCPLCR 190
L+ H CP CR
Sbjct: 167 LQHHLTCPKCR 177
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRR------SDCAVCLLDFEHQDYVRTLPICSHTFHL 173
GLD++VI + P ++ S + C++CL +++ + +R +P C H FHL
Sbjct: 104 GLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFHL 163
Query: 174 DCIDAWLRSHANCPLCR 190
C+DAWL+ + +CP+CR
Sbjct: 164 CCLDAWLKLNGSCPVCR 180
>AT3G60966.1 | Symbols: | RING/U-box superfamily protein |
chr3:22552718-22553137 FORWARD LENGTH=139
Length = 139
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGV 193
CAVCL + E + +R L IC H FH DCID WL + CPLCRA +
Sbjct: 62 CAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQI 107
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 136 PKLHIEE----SRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRA 191
PKL E +R ++CAVCL D E R +P C+H FH C D WL +H CP+CRA
Sbjct: 88 PKLTGRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCRA 147
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 133 LYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAG 192
L + K + + C +CL + + VR LP CSH FH+DC+D WL+ +A CPLC+
Sbjct: 340 LGSQKKRLISGEDASCCICLTRYGDDEQVRELP-CSHVFHVDCVDKWLKINATCPLCKNE 398
Query: 193 V 193
V
Sbjct: 399 V 399
>AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705436 FORWARD LENGTH=253
Length = 253
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 94 PSSAGDVDSLQYDSTTLDGPHLFSPYGLDESVIKTIPFSLYTPKLHIEESRRSD-CAVCL 152
S G VD+ D T+L GL +++ IP T + + S +D C+VCL
Sbjct: 143 QSQMGAVDTAFDDHTSLFDTG--GSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCL 200
Query: 153 LDFEHQDYVRTLPICSHTFHLDCIDAWLRSH 183
DF+ + VR+LP C H FHL CID WL H
Sbjct: 201 QDFQLGETVRSLPHCHHMFHLPCIDNWLLRH 231
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 128 TIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCP 187
T P +Y+ L + + ++CA+CL +FE + ++ L C H FH+ CI WL + ++CP
Sbjct: 88 TTPTLVYSSDLELAGAE-AECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCP 146
Query: 188 LCRAGVLC--SESPFTPLMA 205
CR + SE+P + + A
Sbjct: 147 TCRTSIFSQHSETPSSHINA 166
>AT2G34000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14365177-14365632 FORWARD LENGTH=151
Length = 151
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSD--CAVCLLDFEHQDYVRTLPICSHTFHLDCID 177
GL SVI P Y P + ES + C VCL ++ LP C H F +CI
Sbjct: 61 GLSASVIAAFPTFSYKPDNNDPESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIG 120
Query: 178 AWLRSHANCPLCR 190
WL SHA CP+CR
Sbjct: 121 KWLESHATCPVCR 133
>AT2G28920.1 | Symbols: | RING/U-box superfamily protein |
chr2:12418017-12418454 FORWARD LENGTH=145
Length = 145
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRA 191
C +CL DF+ D VR L C H FH+DCID+W CP+CRA
Sbjct: 93 CVICLEDFKVNDVVRVLVRCKHVFHVDCIDSWCFYKLTCPICRA 136
>AT3G11110.1 | Symbols: | RING/U-box superfamily protein |
chr3:3479979-3480455 FORWARD LENGTH=158
Length = 158
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GLD + I+++P L + EE + +CL FE + ++ LP CSH +H +C+D W
Sbjct: 80 GLDPAEIRSLPVVLCRRERAEEEEEKEC-CICLGGFEEGEKMKVLPPCSHCYHCECVDRW 138
Query: 180 LRSHANCPLCRAGV 193
L++ ++CPLCR +
Sbjct: 139 LKTESSCPLCRVSI 152
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVLCSESPFTPLMAAR 207
C +CL D + +R + CSH FH+DCID WL + CPLCRA + P PL+A
Sbjct: 70 CTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIP-PVPPGNPLVALF 128
Query: 208 IRPDLDD 214
+ P + +
Sbjct: 129 VPPGVIE 135
>AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein |
chr1:26734155-26734640 FORWARD LENGTH=161
Length = 161
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
Query: 127 KTIPFSLY-------TPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
K +P LY TP++ EE C +CLL+ +H + +P C+H FH DCID W
Sbjct: 87 KRVPGPLYISYDVTLTPQI-FEEPDMETCGLCLLEEQH---LFDMPNCAHVFHGDCIDKW 142
Query: 180 LRSHANCPLCRAGVL 194
L + NCPLC ++
Sbjct: 143 LSTSNNCPLCGVEIM 157
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 136 PKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVLC 195
P++ + E + +C +C ++ D LP C H +HL+C++ WL+ H +CP CR + C
Sbjct: 471 PRVAMVE--KGECVICFEEWSKSDMETELP-CKHKYHLECVEKWLKIHTSCPQCRYKLSC 527
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
C +CL ++ ++ V+ LP C H FH +CID WL+ H +CP+CR
Sbjct: 264 CPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCR 306
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 121 LDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL 180
LD ++ T+P +T H + CA+CL D+ + +R LP C H FHL+CID+WL
Sbjct: 207 LDAKLVHTLPCFTFTDSAHHKAGE--TCAICLEDYRFGESLRLLP-CQHAFHLNCIDSWL 263
Query: 181 -RSHANCPLCR 190
+ +CP+C+
Sbjct: 264 TKWGTSCPVCK 274
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVLCSESPFT 201
C +CL + + + +R LP CSH FH +C+D WL+ +A+CPLC++ V S T
Sbjct: 363 CCICLAKYANNEELRELP-CSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLT 415
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 119 YGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
+G+ ++K +P SL H + + CA+CL D+ D +R LP C H FH C+D+
Sbjct: 204 HGMSRRLVKAMP-SLIFSSFHEDNTTAFTCAICLEDYTVGDKLRLLPCC-HKFHAACVDS 261
Query: 179 WLRSHAN-CPLCR 190
WL S CP+C+
Sbjct: 262 WLTSWRTFCPVCK 274
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 147 DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
+C +CL ++ ++ VR LP CSH FHL C+D WLR + CPLC+
Sbjct: 288 ECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLRIISCCPLCK 330
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 147 DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
+C +CL ++ ++ VR LP CSH FHL C+D WLR + CPLC+
Sbjct: 288 ECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLRIISCCPLCK 330
>AT3G43430.1 | Symbols: | RING/U-box superfamily protein |
chr3:15354758-15355261 REVERSE LENGTH=167
Length = 167
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 9/56 (16%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL---------RSHANCPLCRAGVL 194
CAVCL D E +D +R L C+H FH DCID WL +H CPLCR +L
Sbjct: 83 CAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRTCPLCRTPLL 138
>AT4G17245.1 | Symbols: | RING/U-box superfamily protein |
chr4:9669383-9669883 FORWARD LENGTH=166
Length = 166
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 130 PFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL-RSHANCPL 188
P +Y+P L++ ++C +CL +F+ D +R L C H FH+ CI WL SH++CP
Sbjct: 85 PTLVYSPGLNLA-GNEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSSCPT 143
Query: 189 CRAGVLCS 196
CR + S
Sbjct: 144 CRTNIFSS 151
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 121 LDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL 180
LD ++ T+P +T H + CA+CL D+ + +R LP C H FHL+CID+WL
Sbjct: 207 LDAKLVHTLPCFTFTDSAHHKAGET--CAICLEDYRFGESLRLLP-CQHAFHLNCIDSWL 263
Query: 181 -RSHANCPLCR 190
+ +CP+C+
Sbjct: 264 TKWGTSCPVCK 274
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 146 SDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVL 194
+C +CL +F VR LP C+H FH++CID WLR + CP CR V
Sbjct: 233 GECLICLEEFHIGHEVRGLP-CAHNFHVECIDQWLRLNVKCPRCRCSVF 280
>AT4G30370.1 | Symbols: | RING/U-box superfamily protein |
chr4:14858743-14859273 REVERSE LENGTH=176
Length = 176
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 120 GLDESVIKTIP-FSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDA 178
GL +K +P F P E DC VC+ F + R LP C H FH C+D
Sbjct: 89 GLSPRCVKRLPQFKYCEPS---SEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDL 145
Query: 179 WLRSHANCPLCR 190
WL + CP+CR
Sbjct: 146 WLIKVSTCPICR 157
>AT1G51930.1 | Symbols: | RING/U-box superfamily protein |
chr1:19294838-19295236 REVERSE LENGTH=132
Length = 132
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGV 193
C +CL ++E +R L C H FHL CID+WL NCP CR V
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCRRSV 125
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGV 193
C +CL + + +R + CSH FH+DCID WL + CPLCRA +
Sbjct: 70 CTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEI 115
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 118 PYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCID 177
P GL + I + ++ E R DC++CL F D + +LP C+H+FH C++
Sbjct: 175 PQGLTQDAINCLHRQTFSSAEVKSEMR--DCSICLESFTKGDMLISLP-CTHSFHSSCLN 231
Query: 178 AWLRSHANCPLCRAGV 193
WLR+ +CP CR +
Sbjct: 232 PWLRACGDCPCCRRAI 247
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 142 ESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
+S + CAVC+ +FE V+ +P C H FH DC+ WL H +CP+CR
Sbjct: 210 KSEMNQCAVCMDEFEDGSDVKQMP-CKHVFHQDCLLPWLELHNSCPVCR 257
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 143 SRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVLCSESP 199
S ++C++CL +E +R LP C H FH C+D WLR +A CPLC+ +L + P
Sbjct: 318 SEDAECSICLCAYEDGVELRELP-CRHHFHSLCVDKWLRINATCPLCKFNILKNGEP 373
>AT1G63840.1 | Symbols: | RING/U-box superfamily protein |
chr1:23689991-23690491 REVERSE LENGTH=166
Length = 166
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHAN--CPLCRAGVL 194
CAVCL DFE+ D +R L C H FH C+D W+ + CPLCR +
Sbjct: 89 CAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMMGYNQMTCPLCRTQFI 137
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 120 GLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAW 179
GL I ++P Y + + S C +C LD+E + + LP C H++H +CI+ W
Sbjct: 261 GLSADTIASLPSKRYKEGDNQNGTNES-CVICRLDYEDDEDLILLP-CKHSYHSECINNW 318
Query: 180 LRSHANCPLCRAGVLCSES 198
L+ + CP+C A V S S
Sbjct: 319 LKINKVCPVCSAEVSTSTS 337
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 104 QYDSTTLDGPHLFSPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRT 163
+Y ST + F+ G+ +K +P +T I+ + CA+CL D+ D +R
Sbjct: 191 RYCSTIRNSTSQFN--GMCRRTVKAMPSVTFTCA-KIDNTTGFSCAICLEDYIVGDKLRV 247
Query: 164 LPICSHTFHLDCIDAWLRSHAN-CPLCR 190
LP CSH FH+ C+D+WL S CP+C+
Sbjct: 248 LP-CSHKFHVACVDSWLISWRTFCPVCK 274
>AT5G52150.1 | Symbols: | RING/U-box superfamily protein |
chr5:21189988-21191303 REVERSE LENGTH=200
Length = 200
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 114 HLFSPYGLDESVIKTIPFSLYTPKLHIEESR-----RSDCAVCLLDFEHQDYVRTLPICS 168
+ + GL E++I +P Y+ K + R +C++C+ D+E D + LP C
Sbjct: 125 EVVNKEGLPENIISGLPTQKYSRKTWWWSKKTFVPDRKECSICIADYEKGDKITILP-CK 183
Query: 169 HTFHLDCIDAWLRSH 183
H FH DCI WL+ +
Sbjct: 184 HAFHKDCIANWLKEN 198
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 132 SLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRA 191
S T L EE + C+VCL DFE ++ V P C H FH +CI WL++ CP+CR
Sbjct: 157 SRNTQNLSGEEDDKR-CSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRF 214
Query: 192 GVL 194
+L
Sbjct: 215 VIL 217
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVL 194
C+VCL DFE ++ V P C H FH +CI WL++ CP+CR +L
Sbjct: 144 CSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVIL 189
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 138 LHIEESRRSDCAVCLLDF-EHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGV 193
L++ + + CA+C+ D+ E V LP C H FH DCI+ WL+ + CPLCR+ +
Sbjct: 173 LNVATTEENGCAICMEDYIEGSSIVAKLP-CDHEFHGDCINKWLQLNHMCPLCRSSI 228
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 122 DESVIKTIPFSLYTPKLHIEE---SRRSD--CAVCLLDFEHQDYVRTLPICSHTFHLDCI 176
+E+++K++ S+Y P ++ ++ D C++C ++ D V TLP C H +H+ C
Sbjct: 437 EEALLKSLKSSIYRPNDESDDICLNKDDDVKCSICQEEYVDGDEVGTLP-CQHKYHVSCA 495
Query: 177 DAWLRSHANCPLCRAGVLCSESPFT 201
WLR CP+C+ PF+
Sbjct: 496 QQWLRMKNWCPICKTSAESQPHPFS 520
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 122 DESVIKTIPFSLYTPKLHIEE---SRRSD--CAVCLLDFEHQDYVRTLPICSHTFHLDCI 176
+E+++K++ S+Y P ++ ++ D C++C ++ D V TLP C H +H+ C
Sbjct: 437 EEALLKSLKSSIYRPNDESDDICLNKDDDVKCSICQEEYVDGDEVGTLP-CQHKYHVSCA 495
Query: 177 DAWLRSHANCPLCRAGVLCSESPFT 201
WLR CP+C+ PF+
Sbjct: 496 QQWLRMKNWCPICKTSAESQPHPFS 520
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 136 PKLHIEESRR---SDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
P++ I E + CA+CL ++ D +P C H FH C++ WL HA CP+CR
Sbjct: 94 PRVVIGEDKEKYGGSCAICLDEWSKGDVAAEMP-CKHKFHSKCVEEWLGRHATCPMCR 150
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 123 ESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRS 182
+ V++ +P ++T +L + ++C +C + D ++ LP C HTFH C+ WL
Sbjct: 205 KEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELP-CKHTFHPPCLKPWLDE 263
Query: 183 HANCPLCR 190
H +CP+CR
Sbjct: 264 HNSCPICR 271
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 145 RSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
+C +CL +++ ++ V+ +P C H FH CI+ WL H +CP+CR
Sbjct: 110 EGECVICLEEWKSEETVKEMP-CKHRFHGGCIEKWLGFHGSCPVCR 154
>AT5G20885.1 | Symbols: | RING/U-box superfamily protein |
chr5:7084133-7084663 REVERSE LENGTH=176
Length = 176
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 35/75 (46%), Gaps = 25/75 (33%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL---------------RSHANCPLCRAG 192
CAVCL D E D VR L CSH FH +CID WL +H CPLCR
Sbjct: 82 CAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLDYECCGGDENNEGEEDNHRTCPLCR-- 139
Query: 193 VLCSESPFTPLMAAR 207
TPL+AA
Sbjct: 140 --------TPLLAAN 146
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 146 SDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVL 194
++C +CL +E + +R LP C H FH C+D WL +A CPLC+ +L
Sbjct: 323 AECCICLSAYEDETELRELP-CGHHFHCGCVDKWLYINATCPLCKYNIL 370
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 138 LHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
+ IEE+ + C+VCL DFE + +P C+H FH DC+ WL H++CP+CR
Sbjct: 215 VKIEETLQ--CSVCLDDFEIGTEAKLMP-CTHKFHSDCLLPWLELHSSCPVCR 264
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 147 DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
+C +CL ++ ++ VR LP CSH FH C+D WLR + CPLC+
Sbjct: 296 ECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCK 338
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 147 DCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
+C +CL ++ ++ VR LP CSH FH C+D WLR + CPLC+
Sbjct: 296 ECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCK 338
>AT5G41400.1 | Symbols: | RING/U-box superfamily protein |
chr5:16569584-16570114 REVERSE LENGTH=176
Length = 176
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHAN--CPLCRAGVLCSE 197
CAVCL +FE+ D +R L C H FH C+D W+ + CPLCR + E
Sbjct: 105 CAVCLHEFENDDEIRRLTNCQHIFHRSCLDRWMMGYNQMTCPLCRTPFISDE 156
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 146 SDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGV 193
S C++CL+++ D + TLP C H +H DCI WL+ + C +C+A V
Sbjct: 232 SQCSICLMEYAKGDKITTLP-CKHIYHKDCISQWLKQNKVCCICKAEV 278
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
C+VCL + VRTLP C H FH CID WLR CP+C+
Sbjct: 211 CSVCLEQVTVGEIVRTLP-CLHQFHAGCIDPWLRQQGTCPVCK 252
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 136 PKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
P + I ES + C++CL DF+ + +P C H FH+ CI WL H++CP+CR
Sbjct: 231 PTVKISESLQ--CSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLELHSSCPVCR 282
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 136 PKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
P + I ES + C++CL DF+ + +P C H FH+ CI WL H++CP+CR
Sbjct: 231 PTVKISESLQ--CSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLELHSSCPVCR 282
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 146 SDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVL 194
++C +CL ++E +R LP C+H FH CID WL ++ CPLC+ +L
Sbjct: 336 AECCICLCEYEDGVELRELP-CNHHFHCTCIDKWLHINSRCPLCKFNIL 383
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSH--ANCPLCRAGVLCSES 198
C VCL DFE D VR LP C H FH C+D W+ + CP+CR L E
Sbjct: 86 CTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWIVDYNKMKCPVCRHRFLPKEK 138
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
C+VCL DFE + +P C H FH+ CI WL H++CP+CR
Sbjct: 259 CSVCLDDFEKGTEAKEMP-CKHKFHVRCIVPWLELHSSCPVCR 300
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 135 TPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVL 194
+P H ++C +CL +E +R LP C H FH C+D WL +A CPLC+ +L
Sbjct: 340 SPIEHTLLQEDAECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYNIL 398
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 123 ESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL-R 181
+ +++++P +YT L E S CA+C+ D+ + +R LP C H +H CID+WL R
Sbjct: 92 KDLLQSMPTEVYTGVLE-EGSTSVTCAICIDDYRVGEILRILP-CKHKYHAVCIDSWLGR 149
Query: 182 SHANCPLCR 190
+ CP+C+
Sbjct: 150 CRSFCPVCK 158
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 135 TPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVL 194
+P H ++C +CL +E +R LP C H FH C+D WL +A CPLC+ +L
Sbjct: 269 SPIEHTLLQEDAECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYNIL 327
>AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2 |
chr3:22741701-22742213 REVERSE LENGTH=170
Length = 170
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 146 SDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL-RSHANCPLCRAGVLCSESPFTP 202
+CAVCL +FE + +R L C H FH C+D W+ CPLCR +PF P
Sbjct: 92 ENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCPLCR-------TPFVP 142
>AT5G37250.1 | Symbols: | RING/U-box superfamily protein |
chr5:14750393-14750971 FORWARD LENGTH=192
Length = 192
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 142 ESRRSDCAVCLLDFE--HQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
+ + C++CL DF H D + LP C H FH +CI WL+ +CPLCR
Sbjct: 131 DEEETTCSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCR 181
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 124 SVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSH 183
S I +P ++ + H+ S S+C VC +FE + +P C+H +H DCI WL H
Sbjct: 168 SAIDALP-TIKIAQRHLRSSD-SNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQH 224
Query: 184 ANCPLCRAGVLCSESP 199
+CP+CR + + P
Sbjct: 225 NSCPVCRQELPSASGP 240
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 124 SVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSH 183
S I +P ++ + H+ S S+C VC +FE + +P C+H +H DCI WL H
Sbjct: 168 SAIDALP-TIKIAQRHLRSSD-SNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQH 224
Query: 184 ANCPLCRAGVLCSESP 199
+CP+CR + + P
Sbjct: 225 NSCPVCRQELPSASGP 240
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 124 SVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSH 183
S I +P ++ + H+ S S+C VC +FE + +P C+H +H DCI WL H
Sbjct: 168 SAIDALP-TIKIAQRHLRSSD-SNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQH 224
Query: 184 ANCPLCRAGVLCSESP 199
+CP+CR + + P
Sbjct: 225 NSCPVCRQELPSASGP 240
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 99 DVDSLQYDSTTLDGPHL-FSPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEH 157
DVDS+ Y+ G + + GL ES I + H R+ C++C ++E
Sbjct: 272 DVDSMSYEQLLELGDRIGYVNTGLKESEIHRCLGKIKPSVSHTLVDRK--CSICQDEYER 329
Query: 158 QDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGV 193
+D V L C H+FH+ C+ WL CP+C+
Sbjct: 330 EDEVGELN-CGHSFHVHCVKQWLSRKNACPVCKKAA 364
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRA 191
CA+C DF + R LP C+H +H DCI WL SH +CPLCR
Sbjct: 96 CAICREDFVVGESARRLP-CNHLYHNDCIIPWLTSHNSCPLCRV 138
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 127 KTIPFSLYTPKLHIEES---RRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSH 183
K IP + L E +DC +CL +E + +LP C+H FH CI WL+ +
Sbjct: 268 KMIPVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSLP-CNHHFHSTCIVKWLKMN 326
Query: 184 ANCPLCRAGVL 194
A CPLC+ +L
Sbjct: 327 ATCPLCKFNIL 337
>AT5G37270.1 | Symbols: | RING/U-box superfamily protein |
chr5:14757933-14758559 REVERSE LENGTH=208
Length = 208
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 142 ESRRSDCAVCLLDFE--HQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
+ + C++CL DF H D + LP C H FH CI WL+ +CPLCR
Sbjct: 147 DEEETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLCR 197
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 112 GPHLFSPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTF 171
G H P +S I +P T K H++ S S C VC +FE + + +P C H +
Sbjct: 152 GTHHRGPPPAPKSSIDALPTIKITQK-HLKSSD-SHCPVCKDEFELKSEAKQMP-CHHIY 208
Query: 172 HLDCIDAWLRSHANCPLCR 190
H DCI WL H +CP+CR
Sbjct: 209 HSDCIVPWLVQHNSCPVCR 227
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 112 GPHLFSPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTF 171
G H P +S I +P T K H++ S S C VC +FE + + +P C H +
Sbjct: 152 GTHHRGPPPAPKSSIDALPTIKITQK-HLKSSD-SHCPVCKDEFELKSEAKQMP-CHHIY 208
Query: 172 HLDCIDAWLRSHANCPLCR 190
H DCI WL H +CP+CR
Sbjct: 209 HSDCIVPWLVQHNSCPVCR 227
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 112 GPHLFSPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTF 171
G H P +S I +P T K H++ S S C VC +FE + + +P C H +
Sbjct: 152 GTHHRGPPPAPKSSIDALPTIKITQK-HLKSSD-SHCPVCKDEFELKSEAKQMP-CHHIY 208
Query: 172 HLDCIDAWLRSHANCPLCR 190
H DCI WL H +CP+CR
Sbjct: 209 HSDCIVPWLVQHNSCPVCR 227
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
CAVC DF + R LP CSH +H DCI WL H +CPLCR
Sbjct: 169 CAVCKEDFIIGESARRLP-CSHIYHSDCIVPWLSDHNSCPLCR 210
>AT4G00305.1 | Symbols: | RING/U-box superfamily protein |
chr4:131550-131930 FORWARD LENGTH=126
Length = 126
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 110 LDGPHLFSPYGLDESVIKTIPFSLYTPKLHIEE-SRRSD----CAVCLLDFEHQDYVRTL 164
LD LF ++I IP P E+ S R + C +C +F+ D VR L
Sbjct: 28 LDIRRLFGSASSGSTIIDKIPMDDMLPATKFEDISSRVNPPESCRICQDEFDGGDEVRCL 87
Query: 165 PICSHTFHLDCIDAWLR-SHANCPLCRAGVL 194
C H +H CID W++ CPLCR ++
Sbjct: 88 RNCVHVYHKTCIDRWIQDDKMTCPLCRTPIV 118
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 125 VIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL-RSH 183
+++++P +Y+ L E S CA+C+ D+ + +R LP C H +H CID+WL R
Sbjct: 211 LLQSMPTEVYSGVLE-ESSTSVTCAICIDDYCVGEKLRILP-CKHKYHAVCIDSWLGRCR 268
Query: 184 ANCPLCR 190
+ CP+C+
Sbjct: 269 SFCPVCK 275
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLR--SHANCPLCRAGVLCSE--SPF 200
C VCL DF D +R LP C H FH C+D W+ + CP+CR L E +PF
Sbjct: 85 CTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRNRFLPEEKSTPF 141
>AT5G41440.1 | Symbols: | RING/U-box superfamily protein |
chr5:16587235-16587609 REVERSE LENGTH=124
Length = 124
Score = 49.3 bits (116), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 140 IEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGV 193
+EE C++CL +F+ + + C H FH C+ +W+ ++ NCP+CR V
Sbjct: 70 VEEGDEGCCSICLEEFKIGHELMCIKKCRHVFHRFCMLSWIDANRNCPICRCSV 123
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
C+VCL DFE + +P C H FH DC+ WL H++CP+CR
Sbjct: 225 CSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR 266
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
C+VCL DFE + +P C H FH DC+ WL H++CP+CR
Sbjct: 225 CSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR 266
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
C+VCL DFE + +P C H FH DC+ WL H++CP+CR
Sbjct: 225 CSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR 266
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 95 SSAGDVDSLQYDSTTLDGPHLFSPYGLDESVIKTIPFSLYTPKLHIEESRRSDCAVCLLD 154
+ A ++ L T D P P E I ++P TP+ H+ S C VC+ +
Sbjct: 176 TGASSLEQLIEQLTQDDRP---GPPPASEPTINSLPSVKITPQ-HLTNDM-SQCTVCMEE 230
Query: 155 FEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
F LP C H +H DCI WLR + +CP+CR
Sbjct: 231 FIVGGDATELP-CKHIYHKDCIVPWLRLNNSCPICR 265
>AT2G37150.2 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 99 DVDSLQYDSTTLDGPHLFS-PYGLDESVIKT-IPFSLYTPKLHIEESRRSDCAVCLLDFE 156
D+D++ Y+ G + S GL +S I + + ++Y P EE R+ CA+CL +++
Sbjct: 443 DIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTEEQRK--CAICLEEYK 500
Query: 157 HQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVL 194
++ + + C H +H CI WL +CP+C++ L
Sbjct: 501 EKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPAL 538
>AT2G37150.1 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 99 DVDSLQYDSTTLDGPHLFS-PYGLDESVIKT-IPFSLYTPKLHIEESRRSDCAVCLLDFE 156
D+D++ Y+ G + S GL +S I + + ++Y P EE R+ CA+CL +++
Sbjct: 443 DIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTEEQRK--CAICLEEYK 500
Query: 157 HQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVL 194
++ + + C H +H CI WL +CP+C++ L
Sbjct: 501 EKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPAL 538
>AT5G37230.1 | Symbols: | RING/U-box superfamily protein |
chr5:14735154-14735780 FORWARD LENGTH=208
Length = 208
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 139 HIEESRRSDCAVCLLDFE--HQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCR 190
++ + + C++C+ DF H D + LP C H FH CI WL+ +CPLCR
Sbjct: 144 NLGDEEETTCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRSCPLCR 197
>AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A |
chr2:16567506-16568711 REVERSE LENGTH=401
Length = 401
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 123 ESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRS 182
+S I+ +P P H+ +S CAVC +F + R +P C+H +H DCI WL
Sbjct: 177 KSAIEALPLIEIDPT-HLLSDSQSHCAVCKENFVLKSSAREMP-CNHIYHPDCILPWLAI 234
Query: 183 HANCPLCR 190
+CP+CR
Sbjct: 235 RNSCPVCR 242
>AT2G37150.3 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15607600 REVERSE LENGTH=599
Length = 599
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 99 DVDSLQYDSTTLDGPHLFS-PYGLDESVIKT-IPFSLYTPKLHIEESRRSDCAVCLLDFE 156
D+D++ Y+ G + S GL +S I + + ++Y P EE R+ CA+CL +++
Sbjct: 496 DIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTEEQRK--CAICLEEYK 553
Query: 157 HQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVL 194
++ + + C H +H CI WL +CP+C++ L
Sbjct: 554 EKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPAL 591
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 148 CAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGV 193
C +CL + D +R LP C H FH DCID WL +CP+C++ V
Sbjct: 589 CVICLETPKIGDTIRHLP-CLHKFHKDCIDPWLGRSKSCPVCKSSV 633
>AT3G51325.1 | Symbols: | RING/U-box superfamily protein |
chr3:19052259-19052531 FORWARD LENGTH=90
Length = 90
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 131 FSLYTPKLHIEESRRSDC-AVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHAN--CP 187
+L P++ E R +C +VCL+ E +D +++LP CSH FH C+D W CP
Sbjct: 8 LALLYPRVQGGEGREEECCSVCLMRMEAKDVIKSLP-CSHEFHSLCVDTWFNVSRKICCP 66
Query: 188 LCR 190
LCR
Sbjct: 67 LCR 69
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 146 SDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRSHANCPLCRAGVL 194
+DC +CL +E + LP C+H FH CI WL+ A CPLC+ +L
Sbjct: 305 ADCCICLSSYEDGAELHALP-CNHHFHSTCIVKWLKMRATCPLCKYNIL 352
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 123 ESVIKTIPFSLYTPKLHIEESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWLRS 182
+S I+++P + HI ++CAVC FE + R +P C H FH DCI WL
Sbjct: 177 KSAIESLP-RVEISDCHI--GSEANCAVCTEIFETETEAREMP-CKHLFHDDCIVPWLSI 232
Query: 183 HANCPLCR 190
+CP+CR
Sbjct: 233 RNSCPVCR 240
>AT5G43200.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr5:17346141-17346764 REVERSE
LENGTH=207
Length = 207
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 141 EESRRSDCAVCLLDFEHQDYVRTLPICSHTFHLDCIDAWL-RSHANCPLCRAGV 193
EE CA+CL + D LP C+H FH C+ WL R + +CPLCR V
Sbjct: 149 EEEESKTCAICLEELSTSDDYCELPNCTHCFHEPCLTQWLIRGNNSCPLCRKPV 202