Miyakogusa Predicted Gene

Lj3g3v3337500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3337500.1 Non Chatacterized Hit- tr|C4YCH1|C4YCH1_CLAL4
Putative uncharacterized protein OS=Clavispora
lusitan,29.59,7e-19,coiled-coil,NULL; TUMOR NECROSIS FACTOR
SUPERFAMILY, MEMBER 5-INDUCED PROTEIN 1 (CLAST3),NULL;
seg,N,CUFF.45623.1
         (280 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18940.1 | Symbols:  | clast3-related | chr3:6527081-6529050 ...   349   1e-96

>AT3G18940.1 | Symbols:  | clast3-related | chr3:6527081-6529050
           REVERSE LENGTH=281
          Length = 281

 Score =  349 bits (896), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 170/281 (60%), Positives = 210/281 (74%), Gaps = 1/281 (0%)

Query: 1   MEFVAEEGKHLNDNCSTLILPALSIGNVGQLAADLLVSSMATERVGYLDDPHVLPCVGND 60
           MEFV EEGK +N++CSTL+LPALSIGNVGQLA DLLVSS   ERVGYLDDP++LPCVGND
Sbjct: 1   MEFVVEEGKLVNEDCSTLVLPALSIGNVGQLAVDLLVSSTGAERVGYLDDPNLLPCVGND 60

Query: 61  AYGPVPQGDLALPLEAYDSPSNALTIIQQRSPVIKGMMLDFAKNMADFLAGSGKKHIVLL 120
           AYGP+P G++ALPLE Y+S S A T+ QQRSPV KGMM+ FA+N+A+F A SGKKHI++L
Sbjct: 61  AYGPLPCGEIALPLEVYESSSIATTLAQQRSPVAKGMMIKFAENIANFAASSGKKHIIVL 120

Query: 121 SSLDFGKWQKVDMSSGLQIYYLSSANSNGTDENCESLGWKKLQEYDPSQKHWKFLSDLAE 180
           SSLDF +   +DMS G Q+YYLS+A S+G D++CE LG+ +L EYD   + WK+LS + E
Sbjct: 121 SSLDFQRLHNLDMSRGPQVYYLSNAESDGRDDHCERLGFGRLHEYDSEGRCWKYLSSVFE 180

Query: 181 GNATRXXXXXXXXXXXXXXXXXXXPFAALYSFLKAKGLKVTCLLCYCSEGDNISDAFQLA 240
            N+                     PFAAL+S  KA+GLK+TCLLCYCSEGDNI +AF LA
Sbjct: 181 KNSVEELALPSEDELEDIDYYPSLPFAALFSAFKARGLKMTCLLCYCSEGDNIPEAFLLA 240

Query: 241 DAVCKLLRLTPPT-SGIEGNKWRVPLSWMTVYGPPPDMSMF 280
           +A  KL+ LTP    G EG KW++P SW ++YG PPDMSMF
Sbjct: 241 EASSKLMGLTPDKFHGEEGGKWQIPYSWKSMYGAPPDMSMF 281