Miyakogusa Predicted Gene
- Lj3g3v3336290.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3336290.1 Non Chatacterized Hit- tr|F6HA22|F6HA22_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,28.7,9e-19,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR_2,P,gene.g50628.t1.1
(319 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 6e-47
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 141 5e-34
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 3e-33
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 2e-32
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 2e-32
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 2e-32
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 135 4e-32
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 5e-32
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 4e-31
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 131 6e-31
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 3e-30
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 4e-30
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 4e-30
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 5e-30
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 6e-30
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 9e-30
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 127 1e-29
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 5e-29
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 6e-29
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 7e-29
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 2e-28
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 6e-28
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 7e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 7e-28
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 121 8e-28
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 9e-28
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 119 4e-27
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 4e-27
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 5e-27
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 6e-27
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 9e-27
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 1e-26
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 117 1e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 4e-26
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 7e-26
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 1e-25
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 1e-25
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 2e-25
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 110 1e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 4e-24
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 4e-24
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 1e-23
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 107 1e-23
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 3e-23
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 4e-23
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 103 1e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 2e-22
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 103 2e-22
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 5e-22
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 6e-22
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 7e-22
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 8e-22
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 101 9e-22
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 3e-21
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 7e-21
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 98 8e-21
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 9e-21
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 97 1e-20
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 96 4e-20
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 6e-20
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 6e-20
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 8e-19
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 91 1e-18
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 6e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 7e-18
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 88 8e-18
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 8e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 87 2e-17
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 3e-17
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 5e-17
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 84 1e-16
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 82 3e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 82 4e-16
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 8e-16
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 81 1e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 81 1e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 3e-15
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 76 3e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 75 5e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 7e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 8e-14
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 7e-12
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 67 2e-11
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 65 6e-11
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 65 7e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 65 7e-11
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 65 9e-11
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 64 1e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 64 2e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 63 3e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 60 3e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 59 5e-09
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 58 9e-09
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 1e-08
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 57 2e-08
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 56 4e-08
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 4e-08
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 6e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 55 6e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-08
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 55 9e-08
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 54 1e-07
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 54 1e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 54 1e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 54 1e-07
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 54 2e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 53 2e-07
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 53 3e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 4e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 5e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 8e-07
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 51 1e-06
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 50 2e-06
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 49 6e-06
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 8e-06
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT5G14350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 9e-06
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 173/311 (55%), Gaps = 21/311 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M ++G P +Y L+ GC + ++E A EM + G+V Y+ N+
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVK------QGMVPTFYTYNTLIHG 371
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
++ E +E A L+ E+ E G+V ++ Y+ LI+ C G + KA A D
Sbjct: 372 LFMENKIEAAEILIREIRE--KGIVLDSVTYNILINGYCQHG--------DAKKAFALHD 421
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM++ GI+PT TYT LI L ++ A+++ +++ KG+K D+ NTLM G+
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+D + EM I P+ +TYN +M G C + EA++L +MK GIKPDH+SYN
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI+GYS +G K AF VRDEML G +PT TY+AL+ GL N E E AEELL+EM S
Sbjct: 542 TLISGYSKKGD-TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 298 KGICTPDDKKY 308
+GI P+D +
Sbjct: 601 EGI-VPNDSSF 610
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 162/309 (52%), Gaps = 28/309 (9%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G PTI TY LV G +E A+ ++ EMK D +YN ++
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDM---------QTYNPILSWM 305
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
AS++L EM E+ GLVP ++ Y+ LI C G +++ A AY+DEM+
Sbjct: 306 CNEGRASEVLREMKEI--GLVPDSVSYNILIRGCSNNG--------DLEMAFAYRDEMVK 355
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+G+ PT TY LI LF + AE +I+E++EKG+ LD TYN L++GY C++ DA
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY--CQHGDA 413
Query: 185 H--IGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLL 239
++DEM+ IQP TY +++ CR EA +LF+K+ G+KPD + N L
Sbjct: 414 KKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTL 473
Query: 240 IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ G+ G + AF + EM I+P TY+ L+ GL + E+A EL+ EM +G
Sbjct: 474 MDGHCAIGN-MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 300 ICTPDDKKY 308
I PD Y
Sbjct: 533 I-KPDHISY 540
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 81 ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEA 140
E G P T E C + L+ I+ A + +M I+ + T+ ++I
Sbjct: 183 EKGFYPKT--------ETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINV 234
Query: 141 LFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPN 200
L + G+ A+ + M+ G+K + TYNTL+ G++ I+ I EM K QP+
Sbjct: 235 LCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPD 294
Query: 201 LLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEM 260
+ TYN ++ C A ++ +MK G+ PD +SYN+LI G S G ++ AF RDEM
Sbjct: 295 MQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGD-LEMAFAYRDEM 353
Query: 261 LKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+K G+ PTF TY+ LI GL + +++E AE L++E+ KGI D Y IL +
Sbjct: 354 VKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL-DSVTYNILIN 405
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 157 MQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---R 213
M+EKG T N +++ ++ I+ Y +M I+ N+ T+N M+ C +
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 214 CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYD 273
+A+ M+ GIKP ++YN L+ G+S R G ++ A + EM G P TY+
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR-GRIEGARLIISEMKSKGFQPDMQTYN 299
Query: 274 ALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
IL N +A E+L+EM G+ PD Y IL
Sbjct: 300 P-ILSWMCNE--GRASEVLREMKEIGL-VPDSVSYNIL 333
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 158/303 (52%), Gaps = 20/303 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ G+DP + TY +++ G C EV++A E+L +M D S + V Y N+
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI-TRDCSPNT-VTY----NTLIST 374
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ KE +EEA++L + G++P +++LI C T+ A+ +
Sbjct: 375 LCKENQVEEATELARVLTS--KGILPDVCTFNSLIQGLCL----TRNH----RVAMELFE 424
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM S+G EP TY +LI++L G+ A +M+K+M+ G V TYNTL+ G+ K
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
I+DEM + N +TYNT++ G C R +A +L D+M G KPD +YN
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
L+ + RGG +K+A + M NG +P TY LI GL VE A +LL+ +
Sbjct: 545 SLLTHFC-RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 298 KGI 300
KGI
Sbjct: 604 KGI 606
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 145/302 (48%), Gaps = 27/302 (8%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM--- 61
G P ++T+ L+ C H++ A +L+ DM GLV + ++ VM
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLE------DMPSYGLVP---DEKTFTTVMQGY 234
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
+EG L+ A + +M+E G + + ++ C +G ++ A+ + E
Sbjct: 235 IEEGDLDGALRIREQMVEF--GCSWSNVSVNVIVHGFCKEG--------RVEDALNFIQE 284
Query: 122 MISR-GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M ++ G P T+ L+ L + G A +++ M ++G DVYTYN+++SG K
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
+ + + D+M+ + PN +TYNT++ C+ EA +L + + GI PD ++N
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G + + A + +EM G +P TY+ LI L ++++A +LK+M
Sbjct: 405 SLIQGLCLTRNH-RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 298 KG 299
G
Sbjct: 464 SG 465
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 133/317 (41%), Gaps = 61/317 (19%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV---M 61
G P + T+ +L+ G C A EL +EM+ D + +YN + +
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD---------EFTYNMLIDSL 445
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
+G L+EA ++L +M EL SG + Y+TLID C ++ +A DE
Sbjct: 446 CSKGKLDEALNMLKQM-EL-SGCARSVITYNTLIDGFCKA--------NKTREAEEIFDE 495
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M G+ VTY LI+ L + R A ++ +M +G K D YTYN+L++ + +
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIK-------- 230
I I M +P+++TY T++ G C R A KL ++ GI
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 615
Query: 231 ----------------------------PDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK 262
PD +SY ++ G GG ++EA E+L+
Sbjct: 616 VIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675
Query: 263 NGIDPTFTTYDALILGL 279
G P F++ L GL
Sbjct: 676 KGFVPEFSSLYMLAEGL 692
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 42/246 (17%)
Query: 113 DKAVAYKDEMISR-GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN- 170
D+ ++ D MI G++P Y ++ L + E +M G+K DV T+N
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 171 ----------------------------------TLMSGYAKCKYIDAHIGIYDEMVEKR 196
T+M GY + +D + I ++MVE
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 197 IQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS-GIKPDHLSYNLLIAGYSYRGGYVKE 252
+ ++ N ++ G C R +A +M G PD ++N L+ G + G+VK
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC-KAGHVKH 313
Query: 253 AFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILT 312
A + D ML+ G DP TY+++I GL EV++A E+L +M+++ C+P+ Y L
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD-CSPNTVTYNTLI 372
Query: 313 DMVHRE 318
+ +E
Sbjct: 373 STLCKE 378
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 22/222 (9%)
Query: 103 IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIE--ALFEVGRS------WGAEDMI 154
+G GS D++ K + ++M S E T+ +LIE A FE+ W MI
Sbjct: 93 LGRSGSFDDMKKIL---EDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDW----MI 145
Query: 155 KEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC 214
E GLK D + YN +++ + + +M I+P++ T+N ++ CR
Sbjct: 146 DEF---GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRA 202
Query: 215 SEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTT 271
+ + + + M + G+ PD ++ ++ GY G + A R+R++M++ G + +
Sbjct: 203 HQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD-LDGALRIREQMVEFGCSWSNVS 261
Query: 272 YDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+ ++ G VE A ++EM ++ PD + L +
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 25/309 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M +GF P T+ L G ++ + E A + DSG+ AY+ +
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAA------LGVYETAVDSGVKMNAYTCSILLNA 363
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG--IGTKGSLDEIDKAVAY 118
+ KEG +E+A ++L E+ GLVP+ +IY+T+ID C KG +G + ++ ++K
Sbjct: 364 LCKEGKIEKAEEILGR--EMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK---- 417
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
+G++P + Y LI E+G AE + +M+ KG+ V TYN L+ GY +
Sbjct: 418 ------QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLS 235
D I EM + PN+++Y T++ C+ S EAQ + M+ G+ P
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
YN+LI G +G +++AFR EMLK GI+ TY+ LI GL + ++ +AE+LL E+
Sbjct: 532 YNMLIDGCCSKGK-IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEI 590
Query: 296 VSKGICTPD 304
KG+ PD
Sbjct: 591 SRKGL-KPD 598
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 166/311 (53%), Gaps = 25/311 (8%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P++ TY L+ G +E ++ ++LKEM+ D+G + S + + K
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEME------DNGTMPNVVSYGTLINCLCKG 507
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
L EA + +M + G+ P IY+ LID CC+KG +I+ A + EM+
Sbjct: 508 SKLLEAQIVKRDMED--RGVSPKVRIYNMLIDGCCSKG--------KIEDAFRFSKEMLK 557
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+GIE +VTY LI+ L G+ AED++ E+ KGLK DV+TYN+L+SGY +
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
I +Y+EM I+P L TY+ +++ C ++LF +M +KPD L YN ++
Sbjct: 618 CIALYEEMKRSGIKPTLKTYH-LLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLH 673
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
Y+ G +++AF ++ +M++ I TTY++LILG ++ + L+ EM ++ +
Sbjct: 674 CYAVHGD-MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREM- 731
Query: 302 TPDDKKYLILT 312
P+ Y I+
Sbjct: 732 EPEADTYNIIV 742
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 155/340 (45%), Gaps = 61/340 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+L+ F P+ Y + +V + EL MK R S YN +
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD---------RIYPSVFIYNVL 220
Query: 61 ---MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ K + +A L EML L+P + Y+TLID C G +K+
Sbjct: 221 IDGLCKGKRMNDAEQLFDEMLARR--LLPSLITYNTLIDGYCKAG--------NPEKSFK 270
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
++ M + IEP+++T+ L++ LF+ G AE+++KEM++ G D +T++ L GY+
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS 330
Query: 178 KCKYIDAHIGIYDEMVE-----------------------------------KRIQPNLL 202
+ +A +G+Y+ V+ K + PN +
Sbjct: 331 SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEV 390
Query: 203 TYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
YNTM+ G+CR + A+ + M+ G+KPDHL+YN LI + G ++ A + ++
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC-ELGEMENAEKEVNK 449
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
M G+ P+ TY+ LI G +E ++ ++LKEM G
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 26/295 (8%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEM-KRASDMSDSGLVRYAYSDNSYNFVMYK 63
G P + Y L+ GCC+ ++E A KEM K+ +++ LV Y N+ +
Sbjct: 524 GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN---LVTY----NTLIDGLSM 576
Query: 64 EGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMI 123
G L EA DLL E+ GL P Y++LI G G G+ + + +A +EM
Sbjct: 577 TGKLSEAEDLLLEISR--KGLKPDVFTYNSLIS-----GYGFAGN---VQRCIALYEEMK 626
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
GI+PT+ TY LLI + G E + EM LK D+ YN ++ YA ++
Sbjct: 627 RSGIKPTLKTYHLLISLCTKEGIEL-TERLFGEMS---LKPDLLVYNGVLHCYAVHGDME 682
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLI 240
+ +M+EK I + TYN+++LG + E + L D+M ++P+ +YN+++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
G+ Y+ A+ EM + G + L+ GL+ ++AE ++ EM
Sbjct: 743 KGHCEVKDYM-SAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
+ GI P+ + TLL++ L + + ++ + E + + Y + K +
Sbjct: 137 NEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVG 196
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
+ +++ M RI P++ YN ++ G C R ++A++LFD+M + P ++YN LI
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
GY + G +++F+VR+ M + I+P+ T++ L+ GL VE AE +LKEM G
Sbjct: 257 DGYC-KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315
Query: 301 CTPDDKKYLILTD 313
PD + IL D
Sbjct: 316 -VPDAFTFSILFD 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 13/237 (5%)
Query: 80 LESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIE 139
LES P +Y K I L ++ K + + M I P++ Y +LI+
Sbjct: 171 LESDFRPSKFMYG--------KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 140 ALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQP 199
L + R AE + EM + L + TYNTL+ GY K + + + M I+P
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 200 NLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRV 256
+L+T+NT++ G + +A+ + +MK G PD ++++L GYS + A V
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS-SNEKAEAALGV 341
Query: 257 RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+ + +G+ T L+ L ++E+AEE+L ++KG+ P++ Y + D
Sbjct: 342 YETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL-VPNEVIYNTMID 397
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 161/311 (51%), Gaps = 21/311 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ +G+ P + Y ++ G C +V+ A +LL M++ D +V Y NS
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEK--DGIGPDVVTY----NSLISG 230
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G +A+ ++ M + E + P ++ LID C +G + +A + +
Sbjct: 231 LCSSGRWSDATRMVSCMTKRE--IYPDVFTFNALIDACVKEG--------RVSEAEEFYE 280
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EMI R ++P IVTY+LLI L R AE+M M KG DV TY+ L++GY K K
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYN 237
++ + ++ EM ++ + N +TY ++ G+CR + A+++F +M G+ P+ ++YN
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+L+ G G +++A + +M KNG+D TY+ +I G+ EV A ++ +
Sbjct: 401 VLLHGLC-DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNC 459
Query: 298 KGICTPDDKKY 308
+G+ PD Y
Sbjct: 460 QGL-MPDIWTY 469
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 12/232 (5%)
Query: 85 VPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEV 144
+PH L ++ C + ++ A+++ +MI G EP+IVT+ L+
Sbjct: 112 IPHNLCTCNILLNCFCR-------CSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 145 GRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTY 204
R + A M +M G K +V YNT++ G K K +D + + + M + I P+++TY
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 205 NTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML 261
N+++ G C R S+A ++ M I PD ++N LI + G V EA +EM+
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA-CVKEGRVSEAEEFYEEMI 283
Query: 262 KNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+ +DP TY LI GL + +++AEE+ MVSKG C PD Y IL +
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG-CFPDVVTYSILIN 334
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 112/235 (47%), Gaps = 19/235 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ DP I TY L+ G C + +++A+E+ M D +V Y+ N Y
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD--VVTYSILINGYC-- 337
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K +E L EM + G+V +T+ Y LI C G +++ A
Sbjct: 338 --KSKKVEHGMKLFCEMSQ--RGVVRNTVTYTILIQGYCRAG--------KLNVAEEIFR 385
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+ G+ P I+TY +L+ L + G+ A ++ +MQ+ G+ D+ TYN ++ G K
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPD 232
+ IY + + + P++ TY TMMLG + EA LF KMK GI P+
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 155/291 (53%), Gaps = 20/291 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G P I Y +L++G +++A+ L EM ++GL A++ ++
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM------VENGLKPNAFTYGAFISG 531
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ A + EM E G++P+ ++ LI+E C KG I+ AY+
Sbjct: 532 YIEASEFASADKYVKEMRE--CGVLPNKVLCTGLINEYCKKG-------KVIEACSAYR- 581
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+ +GI TYT+L+ LF+ + AE++ +EM+ KG+ DV++Y L++G++K
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYN 237
+ I+DEMVE+ + PN++ YN ++ G CR E A++L D+M G+ P+ ++Y
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
+I GY + G + EAFR+ DEM G+ P Y L+ G ++VE+A
Sbjct: 702 TIIDGYC-KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 162/372 (43%), Gaps = 63/372 (16%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDS--------GLVRYAY 52
M+ G P TY L+ G C +E AK LL EM D+ GL++
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 53 SDNSYNF---------------------VMYKEGGLEEASDLLPEMLELESGLVPHTLIY 91
+D + VM KEG +E+A L M + SGL+P Y
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM--IASGLIPQAQAY 385
Query: 92 DTLIDECC-------------------------TKGIGTKG--SLDEIDKAVAYKDEMIS 124
+LI+ C T G KG S ++D A EMI+
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G P +V YT LI+ + R A ++KEM+E+G+ D++ YN+L+ G +K K +D
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIA 241
EMVE ++PN TY + G+ SE A K +M+ G+ P+ + LI
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
Y +G + EA M+ GI TY L+ GL N +V+ AEE+ +EM KGI
Sbjct: 566 EYCKKGKVI-EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI- 623
Query: 302 TPDDKKYLILTD 313
PD Y +L +
Sbjct: 624 APDVFSYGVLIN 635
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 158/352 (44%), Gaps = 58/352 (16%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P Y +L+ G C V Q ELL EMK+ + +V Y+ +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN------IVISPYTYGTVVKG 426
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
M G L+ A +++ EM + SG P+ +IY TLI T A+
Sbjct: 427 MCSSGDLDGAYNIVKEM--IASGCRPNVVIYTTLIK--------TFLQNSRFGDAMRVLK 476
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY---- 176
EM +GI P I Y LI L + R A + EM E GLK + +TY +SGY
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 177 --------------------------------AKCKYIDAHIGIYDEMVEKRIQPNLLTY 204
K K I+A Y MV++ I + TY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA-CSAYRSMVDQGILGDAKTY 595
Query: 205 NTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML 261
+M G + + +A+++F +M+ GI PD SY +LI G+S + G +++A + DEM+
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS-KLGNMQKASSIFDEMV 654
Query: 262 KNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+ G+ P Y+ L+ G + E+E+A+ELL EM KG+ P+ Y + D
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL-HPNAVTYCTIID 705
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 154/308 (50%), Gaps = 30/308 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G P + Y L+ G C E+E+AKELL EM ++ V Y + Y
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA--VTYCTIIDGY--- 707
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G L EA L EM +L+ GLVP + +Y TL+D CC L+++++A+
Sbjct: 708 -CKSGDLAEAFRLFDEM-KLK-GLVPDSFVYTTLVDGCC--------RLNDVERAITIFG 756
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGL----KLDVYTYNTLMSGY 176
+G + + LI +F+ G++ +++ + + K + TYN ++
Sbjct: 757 TN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYL 815
Query: 177 AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH---CRCSEAQKLFDKMKTSGIKPDH 233
K ++A ++ +M + P ++TY +++ G+ R +E +FD+ +GI+PDH
Sbjct: 816 CKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDH 875
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEML-KNGIDP----TFTTYDALILGLRINHEVEQA 288
+ Y+++I + + G +A + D+M KN +D + +T AL+ G E+E A
Sbjct: 876 IMYSVIINAF-LKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 289 EELLKEMV 296
E++++ MV
Sbjct: 935 EKVMENMV 942
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 145/331 (43%), Gaps = 64/331 (19%)
Query: 12 TYKALVLGCCTHHEVEQAKELLKEMKR---ASDMSDSGLVRYAYSDNSYNFVMYKEGGLE 68
TY L+ G + +V+ A+E+ +EM+ A D+ G++ +S K G ++
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS---------KLGNMQ 644
Query: 69 EASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIE 128
+AS + EM+E GL P+ +IY+ L+ C G EI+KA DEM +G+
Sbjct: 645 KASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSG--------EIEKAKELLDEMSVKGLH 694
Query: 129 PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGI 188
P VTY +I+ + G A + EM+ KGL D + Y TL+ G + ++ I I
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 189 Y--------------------------------------DEMVEKRIQPNLLTYNTMMLG 210
+ D ++ +PN +TYN M+
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 211 HCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
C+ A++LF +M+ + + P ++Y L+ GY + G E F V DE + GI+P
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD-KMGRRAEMFPVFDEAIAAGIEP 873
Query: 268 TFTTYDALILGLRINHEVEQAEELLKEMVSK 298
Y +I +A L+ +M +K
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
+D A+ K+ MI +G+ P TY +LI+ L ++ R A+ ++ EM G+ LD +TY+
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC--------SEAQKLFD 222
L+ G K + DA G+ EMV I N+ Y M C C +A+ LFD
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGI--NIKPY---MYDCCICVMSKEGVMEKAKALFD 371
Query: 223 KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRIN 282
M SG+ P +Y LI GY R V++ + + EM K I + TY ++ G+ +
Sbjct: 372 GMIASGLIPQAQAYASLIEGYC-REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 283 HEVEQAEELLKEMVSKGICTPD 304
+++ A ++KEM++ G C P+
Sbjct: 431 GDLDGAYNIVKEMIASG-CRPN 451
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 47/251 (18%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDS---GLVRYAY--------- 52
G P Y LV GCC ++VE+A + K+ S + L+ + +
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 53 -----------------SDNSYNFV---MYKEGGLEEASDLLPEMLELESGLVPHTLIYD 92
+D +YN + + KEG LE A +L +M + L+P + Y
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN--ANLMPTVITYT 844
Query: 93 TLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAED 152
+L++ G G E+ DE I+ GIEP + Y+++I A + G + A
Sbjct: 845 SLLN-----GYDKMGRRAEMFPVF---DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALV 896
Query: 153 MIKEMQEK-----GLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTM 207
++ +M K G KL + T L+SG+AK ++ + + MV + P+ T +
Sbjct: 897 LVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIEL 956
Query: 208 MLGHCRCSEAQ 218
+ C S +
Sbjct: 957 INESCISSNQR 967
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIK 230
L+ + +D +Y MVE+ + ++ TY+ +++ HCR Q D + + +
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 231 PDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEE 290
+ N V A ++++ M+ G+ P TYD LI GL +E A+
Sbjct: 251 FRTATLN------------VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKS 298
Query: 291 LLKEMVSKGICTPDDKKYLILTDMVHRER 319
LL EM S G+ + D+ Y +L D + + R
Sbjct: 299 LLVEMDSLGV-SLDNHTYSLLIDGLLKGR 326
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 157/299 (52%), Gaps = 20/299 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G+ P + +Y +V G C E+++ +L++ MKR GL +Y S ++ +
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR------KGLKPNSYIYGSIIGLLCRI 329
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
L EA + EM+ G++P T++Y TLID C +G +I A + EM S
Sbjct: 330 CKLAEAEEAFSEMIR--QGILPDTVVYTTLIDGFCKRG--------DIRAASKFFYEMHS 379
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
R I P ++TYT +I ++G A + EM KGL+ D T+ L++GY K ++
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+++ M++ PN++TY T++ G C+ A +L +M G++P+ +YN ++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G + G ++EA ++ E G++ TY L+ + E+++A+E+LKEM+ KG+
Sbjct: 500 GLC-KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 20/315 (6%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P + TY A++ G C ++ +A +L EM DS V + N Y K G +
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS--VTFTELINGYC----KAGHM 437
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
++A + M++ +G P+ + Y TLID C +G ++D A EM G+
Sbjct: 438 KDAFRVHNHMIQ--AGCSPNVVTYTTLIDGLCKEG--------DLDSANELLHEMWKIGL 487
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
+P I TY ++ L + G A ++ E + GL D TY TLM Y K +D
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
I EM+ K +QP ++T+N +M G C + +KL + M GI P+ ++N L+ Y
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
R +K A + +M G+ P TY+ L+ G +++A L +EM KG
Sbjct: 608 IRNN-LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 305 DKKYLILTDMVHRER 319
+++ + R++
Sbjct: 667 STYSVLIKGFLKRKK 681
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 133/268 (49%), Gaps = 20/268 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G P + TY L+ G C +++ A ELL EM + GL ++ NS
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI------GLQPNIFTYNSIVNG 500
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K G +EEA L+ E +GL T+ Y TL+D C G E+DKA
Sbjct: 501 LCKSGNIEEAVKLVGEF--EAAGLNADTVTYTTLMDAYCKSG--------EMDKAQEILK 550
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+ +G++PTIVT+ +L+ G E ++ M KG+ + T+N+L+ Y
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYN 237
+ A IY +M + + P+ TY ++ GHC+ EA LF +MK G +Y+
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGI 265
+LI G+ R ++ EA V D+M + G+
Sbjct: 671 VLIKGFLKRKKFL-EAREVFDQMRREGL 697
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 136/308 (44%), Gaps = 49/308 (15%)
Query: 32 LLKEMKRASD-MSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLI 90
LL+E +R + M + GLV S N Y + K+ + A+ ++ E G+ +
Sbjct: 190 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC-YKTATAIIVFREFPEVGVCWNVAS 248
Query: 91 YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
Y+ +I C G I +A M +G P +++Y+ ++ G
Sbjct: 249 YNIVIHFVCQLG--------RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 151 EDMIKEMQEKGLKLDVY-----------------------------------TYNTLMSG 175
+I+ M+ KGLK + Y Y TL+ G
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPD 232
+ K I A + EM + I P++LTY ++ G C+ EA KLF +M G++PD
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELL 292
+++ LI GY + G++K+AFRV + M++ G P TY LI GL +++ A ELL
Sbjct: 421 SVTFTELINGYC-KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 293 KEMVSKGI 300
EM G+
Sbjct: 480 HEMWKIGL 487
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A+ E G+ + +Y ++I + ++GR A ++ M+ KG DV +Y+T+++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNT---MMLGHCRCSEAQKLFDKMKTSGIKP 231
GY + +D + + M K ++PN Y + ++ C+ +EA++ F +M GI P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
D + Y LI G+ RG ++ A + EM I P TY A+I G ++ +A +L
Sbjct: 350 DTVVYTTLIDGFCKRGD-IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 292 LKEMVSKGICTPDDKKY 308
EM KG+ PD +
Sbjct: 409 FHEMFCKGL-EPDSVTF 424
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 102/254 (40%), Gaps = 66/254 (25%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K+G P I TY ++V G C +E+A +L+ E + A +D+ V Y ++Y
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT--VTYTTLMDAYC-- 537
Query: 61 MYKEGGLEEASDLLPEMLE---------------------------------LESGLVPH 87
K G +++A ++L EML L G+ P+
Sbjct: 538 --KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 88 TLIYDTLIDE-C---------------CTKGIGTKGSLDE-----------IDKAVAYKD 120
+++L+ + C C++G+G G E + +A
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM +G ++ TY++LI+ + + A ++ +M+ +GL D ++ K K
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715
Query: 181 YIDAHIGIYDEMVE 194
D + DE++E
Sbjct: 716 RPDTIVDPIDEIIE 729
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 157/299 (52%), Gaps = 20/299 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G+ P + +Y +V G C E+++ +L++ MKR GL +Y S ++ +
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR------KGLKPNSYIYGSIIGLLCRI 329
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
L EA + EM+ G++P T++Y TLID C +G +I A + EM S
Sbjct: 330 CKLAEAEEAFSEMIR--QGILPDTVVYTTLIDGFCKRG--------DIRAASKFFYEMHS 379
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
R I P ++TYT +I ++G A + EM KGL+ D T+ L++GY K ++
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+++ M++ PN++TY T++ G C+ A +L +M G++P+ +YN ++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G + G ++EA ++ E G++ TY L+ + E+++A+E+LKEM+ KG+
Sbjct: 500 GLC-KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 20/315 (6%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P + TY A++ G C ++ +A +L EM DS V + N Y K G +
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS--VTFTELINGYC----KAGHM 437
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
++A + M++ +G P+ + Y TLID C +G ++D A EM G+
Sbjct: 438 KDAFRVHNHMIQ--AGCSPNVVTYTTLIDGLCKEG--------DLDSANELLHEMWKIGL 487
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
+P I TY ++ L + G A ++ E + GL D TY TLM Y K +D
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
I EM+ K +QP ++T+N +M G C + +KL + M GI P+ ++N L+ Y
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
R +K A + +M G+ P TY+ L+ G +++A L +EM KG
Sbjct: 608 IRNN-LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 305 DKKYLILTDMVHRER 319
+++ + R++
Sbjct: 667 STYSVLIKGFLKRKK 681
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 133/268 (49%), Gaps = 20/268 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G P + TY L+ G C +++ A ELL EM + GL ++ NS
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI------GLQPNIFTYNSIVNG 500
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K G +EEA L+ E +GL T+ Y TL+D C G E+DKA
Sbjct: 501 LCKSGNIEEAVKLVGEF--EAAGLNADTVTYTTLMDAYCKSG--------EMDKAQEILK 550
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+ +G++PTIVT+ +L+ G E ++ M KG+ + T+N+L+ Y
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYN 237
+ A IY +M + + P+ TY ++ GHC+ EA LF +MK G +Y+
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGI 265
+LI G+ R ++ EA V D+M + G+
Sbjct: 671 VLIKGFLKRKKFL-EAREVFDQMRREGL 697
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 136/308 (44%), Gaps = 49/308 (15%)
Query: 32 LLKEMKRASD-MSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLI 90
LL+E +R + M + GLV S N Y + K+ + A+ ++ E G+ +
Sbjct: 190 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC-YKTATAIIVFREFPEVGVCWNVAS 248
Query: 91 YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
Y+ +I C G I +A M +G P +++Y+ ++ G
Sbjct: 249 YNIVIHFVCQLG--------RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 151 EDMIKEMQEKGLKLDVY-----------------------------------TYNTLMSG 175
+I+ M+ KGLK + Y Y TL+ G
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPD 232
+ K I A + EM + I P++LTY ++ G C+ EA KLF +M G++PD
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELL 292
+++ LI GY + G++K+AFRV + M++ G P TY LI GL +++ A ELL
Sbjct: 421 SVTFTELINGYC-KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 293 KEMVSKGI 300
EM G+
Sbjct: 480 HEMWKIGL 487
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A+ E G+ + +Y ++I + ++GR A ++ M+ KG DV +Y+T+++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNT---MMLGHCRCSEAQKLFDKMKTSGIKP 231
GY + +D + + M K ++PN Y + ++ C+ +EA++ F +M GI P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
D + Y LI G+ RG ++ A + EM I P TY A+I G ++ +A +L
Sbjct: 350 DTVVYTTLIDGFCKRGD-IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 292 LKEMVSKGICTPDDKKY 308
EM KG+ PD +
Sbjct: 409 FHEMFCKGL-EPDSVTF 424
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 102/254 (40%), Gaps = 66/254 (25%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K+G P I TY ++V G C +E+A +L+ E + A +D+ V Y ++Y
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT--VTYTTLMDAYC-- 537
Query: 61 MYKEGGLEEASDLLPEMLE---------------------------------LESGLVPH 87
K G +++A ++L EML L G+ P+
Sbjct: 538 --KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 88 TLIYDTLIDE-C---------------CTKGIGTKGSLDE-----------IDKAVAYKD 120
+++L+ + C C++G+G G E + +A
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM +G ++ TY++LI+ + + A ++ +M+ +GL D ++ K K
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715
Query: 181 YIDAHIGIYDEMVE 194
D + DE++E
Sbjct: 716 RPDTIVDPIDEIIE 729
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 156/318 (49%), Gaps = 25/318 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G+ TY L+ G C QA + EM R GL + S
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR------HGLTPSVITYTSLIHS 354
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK- 119
M K G + A + L +M GL P+ Y TL+D G KG ++E AY+
Sbjct: 355 MCKAGNMNRAMEFLDQMRV--RGLCPNERTYTTLVD-----GFSQKGYMNE-----AYRV 402
Query: 120 -DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
EM G P++VTY LI G+ A ++++M+EKGL DV +Y+T++SG+ +
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLS 235
+D + + EMVEK I+P+ +TY++++ G C R EA L+++M G+ PD +
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y LI Y G +++A ++ +EM++ G+ P TY LI GL +A+ LL ++
Sbjct: 523 YTALINAYCMEGD-LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 296 VSKGICTPDDKKYLILTD 313
+ P D Y L +
Sbjct: 582 FYEE-SVPSDVTYHTLIE 598
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 12/234 (5%)
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
G +P L Y+ ++D T S I A EM+ + P + TY +LI
Sbjct: 164 GFMPGVLSYNAVLD-------ATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFC 216
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
G A + +M+ KG +V TYNTL+ GY K + ID + M K ++PNL+
Sbjct: 217 FAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI 276
Query: 203 TYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
+YN ++ G C R E + +M G D ++YN LI GY G + +A + E
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF-HQALVMHAE 335
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
ML++G+ P+ TY +LI + + +A E L +M +G+C P+++ Y L D
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC-PNERTYTTLVD 388
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 56/346 (16%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMK-------------RASDMSDSGL 47
ML+ G P++ TY +L+ C + +A E L +M+ S G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 48 VRYAY------SDNSYN--FVMYKE--------GGLEEASDLLPEMLELESGLVPHTLIY 91
+ AY +DN ++ V Y G +E+A +L +M E GL P + Y
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE--KGLSPDVVSY 453
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
T++ C ++D+A+ K EM+ +GI+P +TY+ LI+ E R+ A
Sbjct: 454 STVLSGFCRSY--------DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG- 210
D+ +EM GL D +TY L++ Y ++ + +++EMVEK + P+++TY+ ++ G
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 211 --HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYS----------YRG----GYVKEAF 254
R EA++L K+ P ++Y+ LI S +G G + EA
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 255 RVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+V + ML P T Y+ +I G ++ +A L KEMV G
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 151/343 (44%), Gaps = 57/343 (16%)
Query: 5 GFDPTITTYKALVLGCC-THHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYK 63
GF P + +Y A++ + + A+ + KEM + + Y + F
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ--VSPNVFTYNILIRGFCFA--- 218
Query: 64 EGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMI 123
G ++ A L +M G +P+ + Y+TLID C L +ID M
Sbjct: 219 -GNIDVALTLFDKMET--KGCLPNVVTYNTLIDGYC--------KLRKIDDGFKLLRSMA 267
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK----- 178
+G+EP +++Y ++I L GR ++ EM +G LD TYNTL+ GY K
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 179 ----------------------------CKY--IDAHIGIYDEMVEKRIQPNLLTYNTMM 208
CK ++ + D+M + + PN TY T++
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 209 LGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGI 265
G + +EA ++ +M +G P ++YN LI G+ G +++A V ++M + G+
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK-MEDAIAVLEDMKEKGL 446
Query: 266 DPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
P +Y ++ G +++V++A + +EMV KGI PD Y
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI-KPDTITY 488
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 158/314 (50%), Gaps = 27/314 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+ + GF P + Y L+ GCC E+E+AK+L EM + GLV ++ +Y +
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL------GLVA---NERTYTVL 239
Query: 61 ---MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
++K G ++ ++ +M E G+ P+ Y+ ++++ C G A
Sbjct: 240 INGLFKNGVKKQGFEMYEKM--QEDGVFPNLYTYNCVMNQLCKDG--------RTKDAFQ 289
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
DEM RG+ IVTY LI L + A ++ +M+ G+ ++ TYNTL+ G+
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHL 234
+ + + ++ + + P+L+TYN ++ G CR S A K+ +M+ GIKP +
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
+Y +LI ++ R +++A ++R M + G+ P TY LI G I ++ +A L K
Sbjct: 410 TYTILIDTFA-RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 295 MVSKGICTPDDKKY 308
MV K C P++ Y
Sbjct: 469 MVEKN-CEPNEVIY 481
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 155/313 (49%), Gaps = 37/313 (11%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY------- 62
+ ++ L+ GCC E+E++ +LL E L + +S N V+Y
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIE-----------LTEFGFSPN---VVIYTTLIDGC 208
Query: 63 -KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
K+G +E+A DL EM +L GLV + Y LI+ G+ +G ++
Sbjct: 209 CKKGEIEKAKDLFFEMGKL--GLVANERTYTVLINGLFKNGVKKQG--------FEMYEK 258
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M G+ P + TY ++ L + GR+ A + EM+E+G+ ++ TYNTL+ G +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNL 238
++ + D+M I PNL+TYNT++ G C + +A L +K+ G+ P ++YN+
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
L++G+ R G A ++ EM + GI P+ TY LI + +E+A +L M
Sbjct: 379 LVSGFC-RKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Query: 299 GICTPDDKKYLIL 311
G+ PD Y +L
Sbjct: 438 GL-VPDVHTYSVL 449
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 99/196 (50%), Gaps = 13/196 (6%)
Query: 112 IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRS----WGAEDMIKEMQEKGLKLDVY 167
++ +++Y +EM+ G P + L+ F VG S W + E + K + LDVY
Sbjct: 110 LNLSISYFNEMVDNGFVPGSNCFNYLLT--FVVGSSSFNQWWS--FFNENKSK-VVLDVY 164
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKM 224
++ L+ G + I+ + E+ E PN++ Y T++ G C+ E +K LF +M
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 225 KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHE 284
G+ + +Y +LI G ++ G K+ F + ++M ++G+ P TY+ ++ L +
Sbjct: 225 GKLGLVANERTYTVLINGL-FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 285 VEQAEELLKEMVSKGI 300
+ A ++ EM +G+
Sbjct: 284 TKDAFQVFDEMRERGV 299
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 167/319 (52%), Gaps = 27/319 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+++G+ P T+ L+ G H++ +A L+ M + LV Y N
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNG---- 234
Query: 61 MYKEGGLEEASDLLPEM--LELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
+ K G + A +LL +M ++E+ +V I++T+ID C +D A+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVV----IFNTIIDSLC--------KYRHVDDALNL 282
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
EM ++GI P +VTY+ LI L GR A ++ +M EK + ++ T+N L+ + K
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 179 -CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHL 234
K+++A +YD+M+++ I P++ TYN+++ G C R +A+++F+ M + PD +
Sbjct: 343 EGKFVEAE-KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
+YN LI G+ + V++ + EM G+ TY LI GL + + + A+++ K+
Sbjct: 402 TYNTLIKGFC-KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 295 MVSKGICTPDDKKYLILTD 313
MVS G+ PD Y IL D
Sbjct: 461 MVSDGV-PPDIMTYSILLD 478
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 153/311 (49%), Gaps = 56/311 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K+G++P+I T +L+ G C + A L+ +M
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM------------------------ 181
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+E G P T+ + TLI G+ E AVA D
Sbjct: 182 -------------------VEMGYRPDTITFTTLI-----HGLFLHNKASE---AVALVD 214
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+ RG +P +VTY +++ L + G + A +++ +M+ ++ DV +NT++ K +
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 274
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
++D + ++ EM K I+PN++TY++++ C R S+A +L M I P+ +++N
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 334
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI + G +V EA ++ D+M+K IDP TY++L+ G ++ +++A+++ + MVS
Sbjct: 335 ALIDAFVKEGKFV-EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 298 KGICTPDDKKY 308
K C PD Y
Sbjct: 394 KD-CFPDVVTY 403
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 148/299 (49%), Gaps = 22/299 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G P + TY +V G C + + A LL +M+ A +D + +N +
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI---------FNTI 266
Query: 61 MYKEGGLEEASDLLPEMLELES-GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ D L E+E+ G+ P+ + Y +LI C+ G + S
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS--------QLL 318
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+MI + I P +VT+ LI+A + G+ AE + +M ++ + D++TYN+L++G+
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSY 236
+D +++ MV K P+++TYNT++ G C R + +LF +M G+ D ++Y
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
LI G + G A +V +M+ +G+ P TY L+ GL N ++E+A E+ M
Sbjct: 439 TTLIQGL-FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 130/261 (49%), Gaps = 19/261 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K DP I TY +LV G C H +++AK++ + M D +V Y N+
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD--VVTY----NTLIKG 409
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K +E+ ++L EM GLV T+ Y TLI +G+ G D K
Sbjct: 410 FCKSKRVEDGTELFREMSH--RGLVGDTVTYTTLI-----QGLFHDGDCDNAQKVFK--- 459
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+S G+ P I+TY++L++ L G+ A ++ MQ+ +KLD+Y Y T++ G K
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
+D ++ + K ++PN++TYNTM+ G C EA L KMK G P+ +YN
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 579
Query: 238 LLIAGYSYRGGYVKEAFRVRD 258
LI + G A +R+
Sbjct: 580 TLIRAHLRDGDKAASAELIRE 600
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 20/298 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + TY +L+ C++ A +LL SDM + + + N+ KE
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLL------SDMIEKKINPNLVTFNALIDAFVKE 343
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G EA L +M++ + P Y++L++ C D +DKA + M+S
Sbjct: 344 GKFVEAEKLYDDMIK--RSIDPDIFTYNSLVNGFCMH--------DRLDKAKQMFEFMVS 393
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+ P +VTY LI+ + R ++ +EM +GL D TY TL+ G D
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
++ +MV + P+++TY+ ++ G C + +A ++FD M+ S IK D Y +I
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
G + G V + + + + G+ P TY+ +I GL +++A LLK+M G
Sbjct: 514 GMC-KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Query: 109 LDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYT 168
+ + D ++ ++M I + TY +LI + A ++ +M + G + + T
Sbjct: 98 MKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157
Query: 169 YNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMK 225
++L++GY K I + + D+MVE +P+ +T+ T++ G H + SEA L D+M
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 226 TSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEV 285
G +P+ ++Y +++ G RG A + ++M I+ ++ +I L V
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGD-TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 286 EQAEELLKEMVSKGI 300
+ A L KEM +KGI
Sbjct: 277 DDALNLFKEMETKGI 291
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 99/192 (51%), Gaps = 12/192 (6%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDV---- 166
++D A+ M+ P+IV + L+ A+ ++ + D++ + EK +L++
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKF----DVVISLGEKMQRLEIVHGL 120
Query: 167 YTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDK 223
YTYN L++ + + I + + +M++ +P+++T ++++ G+C R S+A L D+
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 224 MKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINH 283
M G +PD +++ LI G + EA + D M++ G P TY ++ GL
Sbjct: 181 MVEMGYRPDTITFTTLIHGL-FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 284 EVEQAEELLKEM 295
+ + A LL +M
Sbjct: 240 DTDLALNLLNKM 251
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P I TY L+ G C + ++E+A E+ M++ S+ L Y Y+
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK----SEIKLDIYIYTTMIEG-- 514
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
M K G +++ DL L L+ G+ P+ + Y+T+I C+K + + +A A
Sbjct: 515 MCKAGKVDDGWDLFCS-LSLK-GVKPNVVTYNTMISGLCSKRL--------LQEAYALLK 564
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQE 159
+M G P TY LI A G + ++I+EM+
Sbjct: 565 KMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 143/275 (52%), Gaps = 18/275 (6%)
Query: 47 LVRYAYSDNSYNF-----VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTK 101
++R N + F + K G + +A D++ +M G P+ + Y+TLID C
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY--GCSPNVVSYNTLIDGYCKL 271
Query: 102 GIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG 161
G K + KA A EM+ + P + T+ +LI+ ++ G+ + KEM ++
Sbjct: 272 GGNGK-----MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 162 LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQ 218
+K +V +YN+L++G I I + D+MV +QPNL+TYN ++ G C+ EA
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 219 KLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILG 278
+F +K G P YN+LI Y + G + + F +++EM + GI P TY+ LI G
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYC-KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 279 LRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
L N +E A++L ++ SKG+ PD + IL +
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL--PDLVTFHILME 478
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 176/356 (49%), Gaps = 71/356 (19%)
Query: 5 GFDPTITTYKALVLGCCT---HHEVEQAKELLKEMKRASDMSDSGLVRYAYSDN--SYNF 59
G P + +Y L+ G C + ++ +A +LKEM V S N ++N
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM-----------VENDVSPNLTTFNI 301
Query: 60 VM---YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV 116
++ +K+ L + + EML+ + + P+ + Y++LI+ C G +I +A+
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQD--VKPNVISYNSLINGLCNGG--------KISEAI 351
Query: 117 AYKDEMISRGIEPTIVTYT-----------------------------------LLIEAL 141
+ +D+M+S G++P ++TY +LI+A
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 142 FEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNL 201
++G+ + +EM+ +G+ DV TYN L++G + I+A ++D++ K + P+L
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDL 470
Query: 202 LTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRD 258
+T++ +M G+CR E++K L +M G+KP HL+YN+++ GY + G +K A +R
Sbjct: 471 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC-KEGNLKAATNMRT 529
Query: 259 EMLK-NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+M K + +Y+ L+ G ++E A LL EM+ KG+ P+ Y I+ +
Sbjct: 530 QMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL-VPNRITYEIVKE 584
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 133/277 (48%), Gaps = 22/277 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML P + +Y +L+ G C ++ +A + +M A + L+ Y N +
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPN--LITYNALINGF--- 376
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K L+EA D+ + G VP T +Y+ LID C G +ID A K+
Sbjct: 377 -CKNDMLKEALDMFGSVKG--QGAVPTTRMYNMLIDAYCKLG--------KIDDGFALKE 425
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM GI P + TY LI L G A+ + ++ KGL D+ T++ LM GY +
Sbjct: 426 EMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKG 484
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKM-KTSGIKPDHLSY 236
+ EM + ++P LTYN +M G+C+ A + +M K ++ + SY
Sbjct: 485 ESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYD 273
N+L+ GYS +G +++A + +EML+ G+ P TY+
Sbjct: 545 NVLLQGYSQKGK-LEDANMLLNEMLEKGLVPNRITYE 580
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 122/246 (49%), Gaps = 27/246 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P + TY AL+ G C + +++A ++ +K + + + YN +
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM---------YNML 407
Query: 61 M---YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ K G +++ L EM E E G+VP Y+ LI C G I+ A
Sbjct: 408 IDAYCKLGKIDDGFALKEEM-ERE-GIVPDVGTYNCLIAGLCRNG--------NIEAAKK 457
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
D++ S+G+ P +VT+ +L+E G S A ++KEM + GLK TYN +M GY
Sbjct: 458 LFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 178 KCKYIDAHIGIYDEM-VEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDH 233
K + A + +M E+R++ N+ +YN ++ G+ + +A L ++M G+ P+
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 234 LSYNLL 239
++Y ++
Sbjct: 577 ITYEIV 582
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 43/218 (19%)
Query: 137 LIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKR 196
L+ AL + RS E + KEM + ++ +V+T+N +++ K ++ + ++M
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 197 IQPNLLTYNTMMLGHCRCS----------------------------------------- 215
PN+++YNT++ G+C+
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 216 EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDAL 275
+ K+F +M +KP+ +SYN LI G GG + EA +RD+M+ G+ P TY+AL
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLC-NGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 276 ILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
I G N +++A ++ + +G P + Y +L D
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQG-AVPTTRMYNMLID 409
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 167/319 (52%), Gaps = 27/319 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+++G+ P T+ L+ G H++ +A L+ M + LV Y N
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNG---- 159
Query: 61 MYKEGGLEEASDLLPEM--LELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
+ K G ++ A +LL +M ++E+ +V I++T+ID C +D A+
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVV----IFNTIIDSLC--------KYRHVDDALNL 207
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
EM ++GI P +VTY+ LI L GR A ++ +M EK + ++ T+N L+ + K
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267
Query: 179 -CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHL 234
K+++A ++D+M+++ I P++ TYN+++ G C R +A+++F+ M + PD
Sbjct: 268 EGKFVEAE-KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
+YN LI G+ + V++ + EM G+ TY LI GL + + + A+++ K+
Sbjct: 327 TYNTLIKGFC-KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 295 MVSKGICTPDDKKYLILTD 313
MVS G+ PD Y IL D
Sbjct: 386 MVSDGV-PPDIMTYSILLD 403
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 162/311 (52%), Gaps = 21/311 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M ++G + TY L+ C ++ A LL +M + + +V + N Y
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG--YEPSIVTLSSLLNGY--- 90
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ +A L+ +M+E+ G P T+ + TLI G+ E AVA D
Sbjct: 91 -CHGKRISDAVALVDQMVEM--GYRPDTITFTTLI-----HGLFLHNKASE---AVALVD 139
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+ RG +P +VTY +++ L + G A +++ +M+ ++ DV +NT++ K +
Sbjct: 140 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 199
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
++D + ++ EM K I+PN++TY++++ C R S+A +L M I P+ +++N
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 259
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI + G +V EA ++ D+M+K IDP TY++LI G ++ +++A+++ + MVS
Sbjct: 260 ALIDAFVKEGKFV-EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 298 KGICTPDDKKY 308
K C PD Y
Sbjct: 319 KD-CFPDLDTY 328
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 148/299 (49%), Gaps = 22/299 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G P + TY +V G C +++ A LL +M+ A +D + +N +
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI---------FNTI 191
Query: 61 MYKEGGLEEASDLLPEMLELES-GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ D L E+E+ G+ P+ + Y +LI C+ G + S
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS--------QLL 243
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+MI + I P +VT+ LI+A + G+ AE + +M ++ + D++TYN+L++G+
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSY 236
+D +++ MV K P+L TYNT++ G C R + +LF +M G+ D ++Y
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
LI G + G A +V +M+ +G+ P TY L+ GL N ++E+A E+ M
Sbjct: 364 TTLIQGL-FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 131/264 (49%), Gaps = 25/264 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K DP I TY +L+ G C H +++AK++ + M D ++YN +
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL---------DTYNTL 331
Query: 61 MY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ K +E+ ++L EM GLV T+ Y TLI +G+ G D K
Sbjct: 332 IKGFCKSKRVEDGTELFREMSH--RGLVGDTVTYTTLI-----QGLFHDGDCDNAQKVFK 384
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
+M+S G+ P I+TY++L++ L G+ A ++ MQ+ +KLD+Y Y T++ G
Sbjct: 385 ---QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHL 234
K +D ++ + K ++PN++TYNTM+ G C EA L KMK G PD
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRD 258
+YN LI + G A +R+
Sbjct: 502 TYNTLIRAHLRDGDKAASAELIRE 525
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Query: 100 TKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQE 159
K + + + D ++ ++M GI + TY +LI + A ++ +M +
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 160 KGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSE 216
G + + T ++L++GY K I + + D+MVE +P+ +T+ T++ G H + SE
Sbjct: 74 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 133
Query: 217 AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
A L D+M G +P+ ++Y +++ G RG + AF + ++M I+ ++ +I
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-IDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 277 LGLRINHEVEQAEELLKEMVSKGI 300
L V+ A L KEM +KGI
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGI 216
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 129 PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGI 188
P+I + L+ A+ ++ + + ++MQ G+ ++YTYN L++ + + I + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 189 YDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSY 245
+M++ +P+++T ++++ G+C R S+A L D+M G +PD +++ LI G +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL-F 126
Query: 246 RGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
EA + D M++ G P TY ++ GL +++ A LL +M + I
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P I TY L+ G C + ++E+A E+ M++ S+ L Y Y+
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK----SEIKLDIYIYTTMIEG-- 439
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
M K G +++ DL L L+ G+ P+ + Y+T+I C+K + + +A A
Sbjct: 440 MCKAGKVDDGWDLFCS-LSLK-GVKPNVVTYNTMISGLCSKRL--------LQEAYALLK 489
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQE 159
+M G P TY LI A G + ++I+EM+
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 156/316 (49%), Gaps = 21/316 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
++K+G++P TT+ L+ G +V +A L+ M D +V Y NS
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPD--VVTY----NSIVNG 202
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ + G A DLL +M E + Y T+ID C G ID A++
Sbjct: 203 ICRSGDTSLALDLLRKMEE--RNVKADVFTYSTIIDSLCRDGC--------IDAAISLFK 252
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM ++GI+ ++VTY L+ L + G+ ++K+M + + +V T+N L+ + K
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ +Y EM+ + I PN++TYNT+M G+C R SEA + D M + PD +++
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI GY V + +V + K G+ TY L+ G + +++ AEEL +EMVS
Sbjct: 373 SLIKGYCMVK-RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 298 KGICTPDDKKYLILTD 313
G+ PD Y IL D
Sbjct: 432 HGV-LPDVMTYGILLD 446
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 157/298 (52%), Gaps = 20/298 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G P + TY ++V G C + A +LL++M+ + +D + Y+ +S
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD--VFTYSTIIDS---- 237
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ ++G ++ A L EM G+ + Y++L+ C G G A+ KD
Sbjct: 238 LCRDGCIDAAISLFKEMET--KGIKSSVVTYNSLVRGLCKAGKWNDG-------ALLLKD 288
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+SR I P ++T+ +L++ + G+ A ++ KEM +G+ ++ TYNTLM GY
Sbjct: 289 -MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ + D MV + P+++T+ +++ G+C R + K+F + G+ + ++Y+
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
+L+ G+ + G +K A + EM+ +G+ P TY L+ GL N ++E+A E+ +++
Sbjct: 408 ILVQGFC-QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 146/307 (47%), Gaps = 21/307 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G ++ TY +LV G C + LLK DM +V + N V KE
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLK------DMVSREIVPNVITFNVLLDVFVKE 311
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G L+EA++L EM+ G+ P+ + Y+TL+D C + + + +A D M+
Sbjct: 312 GKLQEANELYKEMIT--RGISPNIITYNTLMDGYCMQ--------NRLSEANNMLDLMVR 361
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
P IVT+T LI+ V R + + + ++GL + TY+ L+ G+ + I
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
++ EMV + P+++TY ++ G C + +A ++F+ ++ S + + Y +I
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
G +GG V++A+ + + G+ P TY +I GL + +A LL++M G
Sbjct: 482 GMC-KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN- 539
Query: 302 TPDDKKY 308
P+D Y
Sbjct: 540 APNDCTY 546
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 20/279 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P I TY L+ G C + + +A +L M R D +V + Y V
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD--IVTFTSLIKGYCMV 381
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G++ ++ + GLV + + Y L+ C G +I A
Sbjct: 382 KRVDDGMKVFRNIS------KRGLVANAVTYSILVQGFCQSG--------KIKLAEELFQ 427
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+S G+ P ++TY +L++ L + G+ A ++ +++Q+ + L + Y T++ G K
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
++ ++ + K ++PN++TY M+ G C+ SEA L KM+ G P+ +YN
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
LI + R G + + ++ +EM G ++ +I
Sbjct: 548 TLIRAH-LRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH 185
GI I T ++I ++ A ++ ++ + G + D T+NTL+ G +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 186 IGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYNLLIAG 242
+ + D MVE QP+++TYN+++ G CR S A L KM+ +K D +Y+ +I
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 243 YSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICT 302
R G + A + EM GI + TY++L+ GL + LLK+MVS+ I
Sbjct: 238 LC-RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI-V 295
Query: 303 PDDKKYLILTDMVHRE 318
P+ + +L D+ +E
Sbjct: 296 PNVITFNVLLDVFVKE 311
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 20/300 (6%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P I + L+ G TH ++ AK +L +M ++ G+V + NS + +KEG +
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDM-----VTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
A ++L +M G P+ Y L+D C G +ID+A +EM + G+
Sbjct: 406 GLALEVLHDMRN--KGCKPNVYSYTILVDGFCKLG--------KIDEAYNVLNEMSADGL 455
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
+P V + LI A + R A ++ +EM KG K DVYT+N+L+SG + I +
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
+ +M+ + + N +TYNT++ R EA+KL ++M G D ++YN LI G
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
R G V +A + ++ML++G P+ + + LI GL + VE+A E KEMV +G TPD
Sbjct: 576 -RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG-STPD 633
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 121/243 (49%), Gaps = 19/243 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G P + T+ +L+ G C E++ A LL+ DM G+V + N+
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR------DMISEGVVANTVTYNTLINA 538
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G ++EA L+ EM+ S L + Y++LI C G E+DKA + +
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPL--DEITYNSLIKGLCRAG--------EVDKARSLFE 588
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+ G P+ ++ +LI L G A + KEM +G D+ T+N+L++G +
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
I+ + ++ ++ + I P+ +T+NT+M C+ +A L D+ G P+H +++
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Query: 238 LLI 240
+L+
Sbjct: 709 ILL 711
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 150/346 (43%), Gaps = 56/346 (16%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM--Y 62
G+ + Y+ L+ + E + LL +MK D G+V + ++ + +M Y
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMK------DEGIV---FKESLFISIMRDY 156
Query: 63 KEGGLE-EASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
+ G + + L+ EM + S P Y+ +++ I G+ ++ V Y +
Sbjct: 157 DKAGFPGQTTRLMLEMRNVYS-CEPTFKSYNVVLE------ILVSGNCHKVAANVFY--D 207
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M+SR I PT+ T+ ++++A V A ++++M + G + Y TL+ +KC
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLS--- 235
++ + + +EM P+ T+N ++LG C R +EA K+ ++M G PD ++
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 236 ----------------------------YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
+N LI G+ G + D + GI P
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 268 TFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
TY++LI G V A E+L +M +KG C P+ Y IL D
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG-CKPNVYSYTILVD 432
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 156/295 (52%), Gaps = 20/295 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ GF P TY ++ C + A ELL++M+ + D+ V+Y+ +
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA--VKYSIIIDG---- 272
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K+G L+ A +L EM E++ G + Y+TLI C G D
Sbjct: 273 LCKDGSLDNAFNLFNEM-EIK-GFKADIITYNTLIGGFCNAG--------RWDDGAKLLR 322
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+MI R I P +VT+++LI++ + G+ A+ ++KEM ++G+ + TYN+L+ G+ K
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
++ I + D M+ K P+++T+N ++ G+C R + +LF +M G+ + ++YN
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELL 292
L+ G+ + G ++ A ++ EM+ + P +Y L+ GL N E+E+A E+
Sbjct: 443 TLVQGFC-QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 151/321 (47%), Gaps = 31/321 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNF- 59
M+++G PT+ T LV G C + +V A L+ M V + N +
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM-----------VETGFQPNEVTYG 232
Query: 60 ----VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKA 115
VM K G A +LL +M E L + Y +ID C G +D A
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKL--DAVKYSIIIDGLCKDG--------SLDNA 282
Query: 116 VAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
+EM +G + I+TY LI GR ++++M ++ + +V T++ L+
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPD 232
+ K + + EM+++ I PN +TYN+++ G C R EA ++ D M + G PD
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELL 292
+++N+LI GY + + + + EM G+ TY+ L+ G + ++E A++L
Sbjct: 403 IMTFNILINGYC-KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 293 KEMVSKGICTPDDKKYLILTD 313
+EMVS+ + PD Y IL D
Sbjct: 462 QEMVSRRV-RPDIVSYKILLD 481
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 139/253 (54%), Gaps = 15/253 (5%)
Query: 64 EGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMI 123
E + EA +L+ M+E+ G P + +TL++ C G ++ AV D M+
Sbjct: 171 ECRVSEALELVDRMVEM--GHKPTLITLNTLVNGLCLNG--------KVSDAVVLIDRMV 220
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
G +P VTY ++ + + G++ A +++++M+E+ +KLD Y+ ++ G K +D
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
+++EM K + +++TYNT++ G C R + KL M I P+ +++++LI
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ + G ++EA ++ EM++ GI P TY++LI G + +E+A +++ M+SKG
Sbjct: 341 DSF-VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG- 398
Query: 301 CTPDDKKYLILTD 313
C PD + IL +
Sbjct: 399 CDPDIMTFNILIN 411
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 151/303 (49%), Gaps = 20/303 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
++K+G++P + L+ G C V +A EL+ M + G + N+
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM------VEMGHKPTLITLNTLVNG 202
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G + +A L+ M+E +G P+ + Y +++ C G + A+
Sbjct: 203 LCLNGKVSDAVVLIDRMVE--TGFQPNEVTYGPVLNVMCKSG--------QTALAMELLR 252
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M R I+ V Y+++I+ L + G A ++ EM+ KG K D+ TYNTL+ G+
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMM---LGHCRCSEAQKLFDKMKTSGIKPDHLSYN 237
D + +M++++I PN++T++ ++ + + EA +L +M GI P+ ++YN
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G+ + ++EA ++ D M+ G DP T++ LI G + ++ EL +EM
Sbjct: 373 SLIDGFC-KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 298 KGI 300
+G+
Sbjct: 432 RGV 434
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 39/325 (12%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF I TY L+ G C + +LL++M + +V ++ +S+ KE
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK--ISPNVVTFSVLIDSF----VKE 346
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECC----------------TKG------ 102
G L EA LL EM++ G+ P+T+ Y++LID C +KG
Sbjct: 347 GKLREADQLLKEMMQ--RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 103 -----IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM 157
I + ID + EM RG+ VTY L++ + G+ A+ + +EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 158 QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS-- 215
+ ++ D+ +Y L+ G ++ + I+ ++ + +++ ++ Y ++ G C S
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 216 -EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
+A LF + G+K D +YN++I+ + K R +M + G P TY+
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR-KMTEEGHAPDELTYNI 583
Query: 275 LILGLRINHEVEQAEELLKEMVSKG 299
LI + + A EL++EM S G
Sbjct: 584 LIRAHLGDDDATTAAELIEEMKSSG 608
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 40/242 (16%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A + +++ G EP V + L+ L R A +++ M E G K + T NTL++
Sbjct: 142 AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE------------------ 216
G + + + D MVE QPN +TY ++ C+ +
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 217 --------------------AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRV 256
A LF++M+ G K D ++YN LI G+ G + A +
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 257 RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVH 316
RD M+K I P T+ LI ++ +A++LLKEM+ +GI P+ Y L D
Sbjct: 322 RD-MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI-APNTITYNSLIDGFC 379
Query: 317 RE 318
+E
Sbjct: 380 KE 381
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 19/243 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G DP I T+ L+ G C + ++ EL +EM S G++ + N+
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREM------SLRGVIANTVTYNTLVQG 447
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G LE A L EM+ + P + Y L+D C G E++KA+
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRR--VRPDIVSYKILLDGLCDNG--------ELEKALEIFG 497
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
++ +E I Y ++I + + A D+ + KG+KLD YN ++S +
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMM---LGHCRCSEAQKLFDKMKTSGIKPDHLSYN 237
+ ++ +M E+ P+ LTYN ++ LG + A +L ++MK+SG D +
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVK 617
Query: 238 LLI 240
++I
Sbjct: 618 MVI 620
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 40/242 (16%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
+A +M S+GI +I T +++I + A + ++ + G + D +NTL++
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166
Query: 175 GYA-KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIK 230
G +C+ +A + + D MVE +P L+T NT++ G C + S+A L D+M +G +
Sbjct: 167 GLCLECRVSEA-LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQ 225
Query: 231 PDHLSY--------------------------NLLIAGYSY--------RGGYVKEAFRV 256
P+ ++Y N+ + Y + G + AF +
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 257 RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVH 316
+EM G TY+ LI G + +LL++M+ + I +P+ + +L D
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI-SPNVVTFSVLIDSFV 344
Query: 317 RE 318
+E
Sbjct: 345 KE 346
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P I +YK L+ G C + E+E+A E+ +++++ D G+ M +
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG------MCNASKV 524
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
++A DL L L+ G+ Y+ +I E C K D + KA +M G
Sbjct: 525 DDAWDLFCS-LPLK-GVKLDARAYNIMISELCRK--------DSLSKADILFRKMTEEGH 574
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTY----NTLMSGYAKCKYID 183
P +TY +LI A + A ++I+EM+ G DV T N L SG ++D
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLD 634
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 152/307 (49%), Gaps = 25/307 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+++G P + T+ L+ G C V +A L+ +M D +V Y N
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID--VVTYGTIVNG---- 270
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
M K G + A +LL +M E + + P +IY +ID C G + A
Sbjct: 271 MCKMGDTKSALNLLSKMEE--THIKPDVVIYSAIIDRLCKDGHHSD--------AQYLFS 320
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+ +GI P + TY +I+ GR A+ ++++M E+ + DV T+N L+S K
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ + DEM+ + I P+ +TYN+M+ G C R +A+ +FD M + PD +++N
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFN 436
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+I Y R V E ++ E+ + G+ TTY+ LI G + A++L +EM+S
Sbjct: 437 TIIDVYC-RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 298 KGICTPD 304
G+C PD
Sbjct: 496 HGVC-PD 501
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 148/305 (48%), Gaps = 40/305 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+ K+GF P + T+ L+ G C + +A L M
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM------------------------ 202
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
E G EA L +M+E+ GL P + ++TLI+ C +G + +A A +
Sbjct: 203 --VETGFLEAVALFDQMVEI--GLTPVVITFNTLINGLCLEG--------RVLEAAALVN 250
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+ +G+ +VTY ++ + ++G + A +++ +M+E +K DV Y+ ++ K
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ ++ EM+EK I PN+ TYN M+ G C R S+AQ+L M I PD L++N
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI+ S + G + EA ++ DEML I P TY+++I G ++ + A+ + M S
Sbjct: 371 ALISA-SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 298 KGICT 302
+ T
Sbjct: 430 PDVVT 434
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 35/326 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ G P + TY ++ G C+ A+ LL++M D + N+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD------VLTFNALISA 375
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG------------------ 102
KEG L EA L EML + P T+ Y+++I C
Sbjct: 376 SVKEGKLFEAEKLCDEMLH--RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV 433
Query: 103 -----IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM 157
I +D+ + E+ RG+ TY LI EV A+D+ +EM
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 158 QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS-- 215
G+ D T N L+ G+ + + ++ + +++ + +I + + YN ++ G C+ S
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 216 -EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
EA LF + G++PD +YN++I+G+ + + +A + +M NG +P +TY+
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA-ISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 275 LILGLRINHEVEQAEELLKEMVSKGI 300
LI G E++++ EL+ EM S G
Sbjct: 613 LIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 22/234 (9%)
Query: 99 CTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQ 158
C K IG ++ D A++ +M R I I ++ +LI+ + + + ++
Sbjct: 109 CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 159 EKGLKLDVYTYNTLMSGY----------------AKCKYIDAHIGIYDEMVEKRIQPNLL 202
+ G + DV T+NTL+ G + +++A + ++D+MVE + P ++
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEA-VALFDQMVEIGLTPVVI 227
Query: 203 TYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
T+NT++ G C R EA L +KM G+ D ++Y ++ G + G K A + +
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC-KMGDTKSALNLLSK 286
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
M + I P Y A+I L + A+ L EM+ KGI P+ Y + D
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI-APNVFTYNCMID 339
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 93/192 (48%), Gaps = 24/192 (12%)
Query: 112 IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
+D A+ + D M+ T V +I + R A + ++M+ + + L++Y++N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSG 228
L+ + C + + + ++ + QP+++T+NT++ G C R SEA LF
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF------- 199
Query: 229 IKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
GY G++ EA + D+M++ G+ P T++ LI GL + V +A
Sbjct: 200 -------------GYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 289 EELLKEMVSKGI 300
L+ +MV KG+
Sbjct: 246 AALVNKMVGKGL 257
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 164/367 (44%), Gaps = 78/367 (21%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMK-------------------RASD 41
M+ G T+ + +V G C EVE++K+L+KE + D
Sbjct: 215 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRD 274
Query: 42 MSD-SGLVRYAYSDNS-YNFVMY--------KEGGLEEASDLLPEMLELESGLVPHTLIY 91
S G+++ D YN V Y K G + +A L EM E G+ +Y
Sbjct: 275 FSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE--RGIESDVHVY 332
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
+LI C KG + +A DE+ +G+ P+ TY LI+ + +VG AE
Sbjct: 333 TSLISWNCRKG--------NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAE 384
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNT----- 206
++ EMQ KG+ + +NTL+ GY + +D IYD M +K Q ++ T NT
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 207 ---------------MMLGHCRCS------------------EAQKLFDKMKTSGIKPDH 233
MM G + S EA++LF +M + G++P+
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
++YN++I Y + G +KEA ++R M NG+DP TY +LI G I V++A L
Sbjct: 505 ITYNVMIYAYC-KQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 294 EMVSKGI 300
EM KG+
Sbjct: 564 EMGLKGL 570
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 147/319 (46%), Gaps = 21/319 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G + + Y +L+ C +++A L E+ ++ GL +Y+ +
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL------TEKGLSPSSYTYGALIDG 373
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K G + A L+ EM G+ ++++TLID C KG+ +D+A D
Sbjct: 374 VCKVGEMGAAEILMNEMQS--KGVNITQVVFNTLIDGYCRKGM--------VDEASMIYD 423
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M +G + + T + + R A+ + M E G+KL +Y L+ Y K
Sbjct: 424 VMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEG 483
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
++ ++ EM K +QPN +TYN M+ +C+ EA+KL M+ +G+ PD +Y
Sbjct: 484 NVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYT 543
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G V EA R+ EM G+D TY +I GL + ++A L EM
Sbjct: 544 SLIHGECI-ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602
Query: 298 KGICTPDDKKYLILTDMVH 316
KG T D+K Y L +H
Sbjct: 603 KGY-TIDNKVYTALIGSMH 620
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 109/192 (56%), Gaps = 4/192 (2%)
Query: 112 IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
ID + M+ G++ T+ + T+++E L G ++ +IKE KG+K + YTYNT
Sbjct: 205 IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM---LGHCRCSEAQKLFDKMKTSG 228
+++ Y K + G+ M + + N +TY +M + + + S+A+KLFD+M+ G
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 229 IKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
I+ D Y LI+ ++ R G +K AF + DE+ + G+ P+ TY ALI G+ E+ A
Sbjct: 325 IESDVHVYTSLIS-WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 289 EELLKEMVSKGI 300
E L+ EM SKG+
Sbjct: 384 EILMNEMQSKGV 395
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 157 MQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE 216
M +KGL +D + + K + ID + I+ MV+ ++ + + ++ G CR E
Sbjct: 180 MVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGE 239
Query: 217 ---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY--VKEAFRVRDEMLKNGIDPTFTT 271
++KL + GIKP+ +YN +I Y + + V+ +V M K+G+ T
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKV---MKKDGVVYNKVT 296
Query: 272 YDALILGLRI-NHEVEQAEELLKEMVSKGI 300
Y L++ L + N ++ AE+L EM +GI
Sbjct: 297 Y-TLLMELSVKNGKMSDAEKLFDEMRERGI 325
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 152/307 (49%), Gaps = 25/307 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+++G P + T+ L+ G C V +A L+ +M D +V Y N
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID--VVTYGTIVNG---- 270
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
M K G + A +LL +M E + + P +IY +ID C G + A
Sbjct: 271 MCKMGDTKSALNLLSKMEE--THIKPDVVIYSAIIDRLCKDGHHSD--------AQYLFS 320
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+ +GI P + TY +I+ GR A+ ++++M E+ + DV T+N L+S K
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ + DEM+ + I P+ +TYN+M+ G C R +A+ +FD M + PD +++N
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFN 436
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+I Y R V E ++ E+ + G+ TTY+ LI G + A++L +EM+S
Sbjct: 437 TIIDVYC-RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 298 KGICTPD 304
G+C PD
Sbjct: 496 HGVC-PD 501
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 148/305 (48%), Gaps = 40/305 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+ K+GF P + T+ L+ G C + +A L M
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM------------------------ 202
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
E G EA L +M+E+ GL P + ++TLI+ C +G + +A A +
Sbjct: 203 --VETGFLEAVALFDQMVEI--GLTPVVITFNTLINGLCLEG--------RVLEAAALVN 250
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+ +G+ +VTY ++ + ++G + A +++ +M+E +K DV Y+ ++ K
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ ++ EM+EK I PN+ TYN M+ G C R S+AQ+L M I PD L++N
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI+ S + G + EA ++ DEML I P TY+++I G ++ + A+ + M S
Sbjct: 371 ALISA-SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 298 KGICT 302
+ T
Sbjct: 430 PDVVT 434
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 35/326 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ G P + TY ++ G C+ A+ LL++M D + N+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD------VLTFNALISA 375
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG------------------ 102
KEG L EA L EML + P T+ Y+++I C
Sbjct: 376 SVKEGKLFEAEKLCDEMLH--RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV 433
Query: 103 -----IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM 157
I +D+ + E+ RG+ TY LI EV A+D+ +EM
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 158 QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS-- 215
G+ D T N L+ G+ + + ++ + +++ + +I + + YN ++ G C+ S
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 216 -EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
EA LF + G++PD +YN++I+G+ + + +A + +M NG +P +TY+
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA-ISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 275 LILGLRINHEVEQAEELLKEMVSKGI 300
LI G E++++ EL+ EM S G
Sbjct: 613 LIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 22/234 (9%)
Query: 99 CTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQ 158
C K IG ++ D A++ +M R I I ++ +LI+ + + + ++
Sbjct: 109 CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 159 EKGLKLDVYTYNTLMSGY----------------AKCKYIDAHIGIYDEMVEKRIQPNLL 202
+ G + DV T+NTL+ G + +++A + ++D+MVE + P ++
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEA-VALFDQMVEIGLTPVVI 227
Query: 203 TYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
T+NT++ G C R EA L +KM G+ D ++Y ++ G + G K A + +
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC-KMGDTKSALNLLSK 286
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
M + I P Y A+I L + A+ L EM+ KGI P+ Y + D
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI-APNVFTYNCMID 339
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 93/192 (48%), Gaps = 24/192 (12%)
Query: 112 IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
+D A+ + D M+ T V +I + R A + ++M+ + + L++Y++N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSG 228
L+ + C + + + ++ + QP+++T+NT++ G C R SEA LF
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF------- 199
Query: 229 IKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
GY G++ EA + D+M++ G+ P T++ LI GL + V +A
Sbjct: 200 -------------GYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 289 EELLKEMVSKGI 300
L+ +MV KG+
Sbjct: 246 AALVNKMVGKGL 257
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 167/351 (47%), Gaps = 56/351 (15%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ P + TY L+ C V A +LL EM+ D G + N
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR------DRGCTPDVVTYNVLVNG 283
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ KEG L+EA L +M SG P+ + ++ ++ C + G + +K +A
Sbjct: 284 ICKEGRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMC-----STGRWMDAEKLLA--- 333
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+ +G P++VT+ +LI L G A D++++M + G + + +YN L+ G+ K K
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR------------------CS------- 215
+D I + MV + P+++TYNTM+ C+ CS
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 216 -------------EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK 262
+A KL D+M+ +KPD ++Y+ L+ G S R G V EA + E +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS-REGKVDEAIKFFHEFER 512
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
GI P T+++++LGL + + ++A + L M+++G C P++ Y IL +
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG-CKPNETSYTILIE 562
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 158/323 (48%), Gaps = 29/323 (8%)
Query: 3 KVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDN-SYNFVM 61
++ P + TY ++ C +++QA E+L M L R Y D +Y ++
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM----------LQRDCYPDVITYTILI 246
Query: 62 ---YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
++ G+ A LL EM + G P + Y+ L++ C +G +D+A+ +
Sbjct: 247 EATCRDSGVGHAMKLLDEMRD--RGCTPDVVTYNVLVNGICKEG--------RLDEAIKF 296
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
++M S G +P ++T+ +++ ++ GR AE ++ +M KG V T+N L++ +
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLS 235
+ I I ++M + QPN L+YN ++ G C + A + ++M + G PD ++
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
YN ++ + G V++A + +++ G P TY+ +I GL + +A +LL EM
Sbjct: 417 YNTMLTALC-KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 296 VSKGICTPDDKKYLILTDMVHRE 318
+K + PD Y L + RE
Sbjct: 476 RAKDL-KPDTITYSSLVGGLSRE 497
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 151/326 (46%), Gaps = 39/326 (11%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + TY LV G C +++A + L +DM SG + N M
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFL------NDMPSSGCQPNVITHNIILRSMCST 322
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKG---------------SL 109
G +A LL +ML G P + ++ LI+ C KG+ + SL
Sbjct: 323 GRWMDAEKLLADMLR--KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 110 D------------EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM 157
++D+A+ Y + M+SRG P IVTY ++ AL + G+ A +++ ++
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 158 QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---C 214
KG + TYNT++ G AK I + DEM K ++P+ +TY++++ G R
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
EA K F + + GI+P+ +++N ++ G + A M+ G P T+Y
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLC-KSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 275 LILGLRINHEVEQAEELLKEMVSKGI 300
LI GL ++A ELL E+ +KG+
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGL 585
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 139/271 (51%), Gaps = 26/271 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ GF P++ T+ L+ C + +A ++L++M + +S SYN +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS---------LSYNPL 385
Query: 61 MY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
++ KE ++ A + L M+ G P + Y+T++ C G +++ AV
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVS--RGCYPDIVTYNTMLTALCKDG--------KVEDAVE 435
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
+++ S+G P ++TY +I+ L + G++ A ++ EM+ K LK D TY++L+ G +
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFD---KMKTSGIKPDHL 234
+ +D I + E I+PN +T+N++MLG C+ + + D M G KP+
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGI 265
SY +LI G +Y G KEA + +E+ G+
Sbjct: 556 SYTILIEGLAYE-GMAKEALELLNELCNKGL 585
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 102/197 (51%), Gaps = 8/197 (4%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
E+++ + + M+ G P I+ T LI +G++ A +++ ++ G DV TYN
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
++SGY K I+ + + D M + P+++TYNT++ C + +A ++ D+M
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
PD ++Y +LI + R V A ++ DEM G P TY+ L+ G+ +++
Sbjct: 234 DCYPDVITYTILIEA-TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 288 AEELLKEMVSKGICTPD 304
A + L +M S G C P+
Sbjct: 293 AIKFLNDMPSSG-CQPN 308
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 18/267 (6%)
Query: 55 NSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDK 114
N++ M + G LEE L M+ G VP + TLI C G + K
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVY--HGNVPDIIPCTTLIRGFCRLG--------KTRK 155
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A + + G P ++TY ++I + G A ++ M + DV TYNT++
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILR 212
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKP 231
+ + + D M+++ P+++TY ++ CR S A KL D+M+ G P
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
D ++YN+L+ G + G + EA + ++M +G P T++ ++ + AE+L
Sbjct: 273 DVVTYNVLVNGIC-KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 292 LKEMVSKGICTPDDKKYLILTDMVHRE 318
L +M+ KG +P + IL + + R+
Sbjct: 332 LADMLRKGF-SPSVVTFNILINFLCRK 357
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 167/347 (48%), Gaps = 48/347 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDS--------GLVRYAY 52
M+K+G+ P+I T +L+ G C + + +A L+ +M D+ GL ++
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 53 SDNSYNFV---------------------MYKEGGLEEASDLLPEMLELESGLV-PHTLI 90
+ + V + K G + A +LL +M E G + +I
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM---EKGKIEADVVI 242
Query: 91 YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
Y T+ID C +D A+ EM ++GI P + TY+ LI L GR A
Sbjct: 243 YSTVIDSLC--------KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 294
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAK-CKYIDAHIGIYDEMVEKRIQPNLLTYNTMML 209
++ +M E+ + +V T+N+L+ +AK K I+A ++DEM+++ I PN++TYN+++
Sbjct: 295 SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE-KLFDEMIQRSIDPNIVTYNSLIN 353
Query: 210 GHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID 266
G C R EAQ++F M + PD ++YN LI G+ + V + + +M + G+
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC-KAKKVVDGMELFRDMSRRGLV 412
Query: 267 PTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
TY LI G + + A+ + K+MVS G+ P+ Y L D
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV-HPNIMTYNTLLD 458
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 156/316 (49%), Gaps = 21/316 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P + TY A++ G C E + A LL +M++ +D +V Y+ +S
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD--VVIYSTVIDS---- 249
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K +++A +L EM G+ P Y +LI C G + S
Sbjct: 250 LCKYRHVDDALNLFTEMDN--KGIRPDVFTYSSLISCLCNYGRWSDAS--------RLLS 299
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+ R I P +VT+ LI+A + G+ AE + EM ++ + ++ TYN+L++G+
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
+D I+ MV K P+++TYNT++ G C+ + +LF M G+ + ++Y
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G+ ++ A V +M+ +G+ P TY+ L+ GL N ++E+A + E +
Sbjct: 420 TLIHGF-FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQ 477
Query: 298 KGICTPDDKKYLILTD 313
K PD Y I+++
Sbjct: 478 KSKMEPDIYTYNIMSE 493
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 162/322 (50%), Gaps = 21/322 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ +P + T+ +L+ ++ +A++L EM + S D +V Y N F
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS--IDPNIVTYNSLING--FC 356
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
M+ L+EA + M+ + +P + Y+TLI+ C + +D ++D
Sbjct: 357 MHDR--LDEAQQIFTLMVSKDC--LPDVVTYNTLINGFCK-------AKKVVDGMELFRD 405
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M RG+ VTYT LI F+ A+ + K+M G+ ++ TYNTL+ G K
Sbjct: 406 -MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYN 237
++ + +++ + + +++P++ TYN M G C+ + + LF + G+KPD ++YN
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+I+G+ + G +EA+ + +M ++G P TY+ LI + + + EL+KEM S
Sbjct: 525 TMISGFC-KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Query: 298 KGICTPDDKKYLILTDMVHRER 319
D Y ++TDM+H R
Sbjct: 584 CRF-AGDASTYGLVTDMLHDGR 604
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 147/306 (48%), Gaps = 50/306 (16%)
Query: 46 GLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGT 105
G+ Y+ N + + L A +L +M++L G P + ++L++ C
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYG--PSIVTLNSLLNGFCHG---- 148
Query: 106 KGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLD 165
+ I +AVA D+M+ G +P VT+T L+ LF+ ++ A +++ M KG + D
Sbjct: 149 ----NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 204
Query: 166 VYTYNTLMSGYAK---------------------------------CKY--IDAHIGIYD 190
+ TY +++G K CKY +D + ++
Sbjct: 205 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFT 264
Query: 191 EMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRG 247
EM K I+P++ TY++++ C R S+A +L M I P+ +++N LI ++ G
Sbjct: 265 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Query: 248 GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKK 307
+ EA ++ DEM++ IDP TY++LI G ++ +++A+++ MVSK C PD
Sbjct: 325 KLI-EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD-CLPDVVT 382
Query: 308 YLILTD 313
Y L +
Sbjct: 383 YNTLIN 388
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 15/241 (6%)
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
L+EA DL EM++ S P + + L+ + + D +++ ++M G
Sbjct: 46 LDEAVDLFGEMVK--SRPFPSIVEFSKLLSAI--------AKMKKFDLVISFGEKMEILG 95
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
+ + TY ++I L + A ++ +M + G + T N+L++G+ I +
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ D+MVE QP+ +T+ T++ G H + SEA L ++M G +PD ++Y +I G
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
R G A + ++M K I+ Y +I L V+ A L EM +KGI P
Sbjct: 216 CKR-GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI-RP 273
Query: 304 D 304
D
Sbjct: 274 D 274
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 15/217 (6%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEAL-----FEVGRSWGAEDMIKEMQEKGLKLD 165
++D+AV EM+ P+IV ++ L+ A+ F++ S+G ++M+ G+ +
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFG-----EKMEILGVSHN 99
Query: 166 VYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFD 222
+YTYN +++ + + + I +M++ P+++T N+++ G C R SEA L D
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 223 KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRIN 282
+M G +PD +++ L+ G ++ EA + + M+ G P TY A+I GL
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGL-FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 283 HEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
E + A LL +M KG D Y + D + + R
Sbjct: 219 GEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCKYR 254
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 167/350 (47%), Gaps = 55/350 (15%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+L+ G P TY L+ GC +H+ + A E++ M +S++ +G+V +
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT-SSNIEVNGVVYQTIING----- 557
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K G +A +LL M+E E L + Y+++ID +G E+D AVA +
Sbjct: 558 LCKVGQTSKARELLANMIE-EKRLCVSCMSYNSIIDGFFKEG--------EMDSAVAAYE 608
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM GI P ++TYT L+ L + R A +M EM+ KG+KLD+ Y L+ G+ K
Sbjct: 609 EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH--------------------CRCSE---- 216
+++ ++ E++E+ + P+ YN+++ G RC
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 217 --------------AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK 262
A +L+ +M+ G+ PD + Y +++ G S +G +VK ++ +EM K
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVK-VVKMFEEMKK 787
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILT 312
N + P Y+A+I G +++A L EM+ KGI PD + IL
Sbjct: 788 NNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL-PDGATFDILV 836
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 25/244 (10%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRAS---DMSDSGLVRYAYSDNSYNFVM 61
G P + TY +L+ G C ++ ++QA E+ EMK D+ G + +
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC-------- 665
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
K +E AS L E+LE GL P IY++LI G + +L + A+ +
Sbjct: 666 -KRSNMESASALFSELLE--EGLNPSQPIYNSLIS-------GFR-NLGNMVAALDLYKK 714
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M+ G+ + TYT LI+ L + G A ++ EMQ GL D Y +++G +K
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNL 238
+ +++EM + + PN+L YN ++ GH R EA +L D+M GI PD ++++
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI 834
Query: 239 LIAG 242
L++G
Sbjct: 835 LVSG 838
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 140/299 (46%), Gaps = 20/299 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G +P Y V CC ++ A LL+EMK S + Y+ S K+
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPS---QETYT--SVILASVKQ 317
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G +++A L EM L G+ + + +LI C +++ A+ D+M
Sbjct: 318 GNMDDAIRLKDEM--LSDGISMNVVAATSLITGHCKN--------NDLVSALVLFDKMEK 367
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G P VT+++LIE + G A + K+M+ GL V+ +T++ G+ K + +
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ ++DE E + N+ NT++ C + EA +L KM++ GI P+ +SYN ++
Sbjct: 428 ALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML 486
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G+ R + A V +L+ G+ P TY LI G NH+ + A E++ M S I
Sbjct: 487 GHC-RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 151/344 (43%), Gaps = 67/344 (19%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML G + +L+ G C ++++ A L +M++ S NS F
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP-----------SPNSVTFS 378
Query: 61 MY-----KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKA 115
+ K G +E+A + +M L GL P T+I KG E +A
Sbjct: 379 VLIEWFRKNGEMEKALEFYKKMEVL--GLTPSVFHVHTIIQGWL------KGQKHE--EA 428
Query: 116 VAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
+ DE G+ V T+L L + G++ A +++ +M+ +G+ +V +YN +M G
Sbjct: 429 LKLFDESFETGLANVFVCNTIL-SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLG 487
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQ---KLFDKMKTSGIKPD 232
+ + K +D ++ ++EK ++PN TY+ ++ G R + Q ++ + M +S I+ +
Sbjct: 488 HCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVN 547
Query: 233 H------------------------------------LSYNLLIAGYSYRGGYVKEAFRV 256
+SYN +I G+ ++ G + A
Sbjct: 548 GVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF-FKEGEMDSAVAA 606
Query: 257 RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+EM NGI P TY +L+ GL N+ ++QA E+ EM +KG+
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGV 650
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 80 LESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI-EPTIVTYTLLI 138
+E G P +L+Y + CC +LD + A + EM + + P+ TYT +I
Sbjct: 260 IERGAEPDSLLYSLAVQACCK-------TLD-LAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 139 EALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQ 198
A + G A + EM G+ ++V +L++G+ K + + + ++D+M ++
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 199 PNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFR 255
PN +T++ ++ + E +K + KM+ G+ P + +I G+ +G +EA +
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW-LKGQKHEEALK 430
Query: 256 VRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ DE + G+ F + ++ L + ++A ELL +M S+GI
Sbjct: 431 LFDESFETGLANVFVC-NTILSWLCKQGKTDEATELLSKMESRGI 474
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 23/263 (8%)
Query: 50 YAYSDNSYNFVM---YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTK 106
+ + ++N+++ K+ + A D++ +MLEL+ ++P + + +
Sbjct: 159 FEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELD--VIPFFPYVNRTLSALVQR----- 211
Query: 107 GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDV 166
+ + +A M++ G++ VT LL+ A + A +++ E+G + D
Sbjct: 212 ---NSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 167 YTYNTLMSGYAKCKYIDAHIG--IYDEMVEKRI-QPNLLTYNTMMLGHCR---CSEAQKL 220
Y+ ++ A CK +D + + EM EK++ P+ TY +++L + +A +L
Sbjct: 269 LLYS--LAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326
Query: 221 FDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLR 280
D+M + GI + ++ LI G+ V A + D+M K G P T+ LI R
Sbjct: 327 KDEMLSDGISMNVVAATSLITGHCKNNDLVS-ALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 281 INHEVEQAEELLKEMVSKGICTP 303
N E+E+A E K+M G+ TP
Sbjct: 386 KNGEMEKALEFYKKMEVLGL-TP 407
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 153 MIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYN---TMML 209
++ + G +++ +N L++ Y+K + D + I ++M+E + P N + ++
Sbjct: 150 LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALV 209
Query: 210 GHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTF 269
+EA++L+ +M G+ D+++ LL+ S R EA V ++ G +P
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRA-SLREEKPAEALEVLSRAIERGAEPDS 268
Query: 270 TTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
Y + ++ A LL+EM K +C P + Y
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETY 307
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 164/321 (51%), Gaps = 34/321 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G PT+ T+ ++ C ++E+ ++ EMKR + +S+ +YN +
Sbjct: 229 MIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN---------IEFSEVTYNIL 279
Query: 61 M---YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ K G +EEA +M + P++ ++ LI+ C +G+ D A
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYS--FNPLIEGYCKQGL--------FDDAWG 329
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
DEM++ GI PT TY + I AL + GR A +++ M DV +YNTLM GY
Sbjct: 330 VTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP----DVVSYNTLMHGYI 385
Query: 178 KC-KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDH 233
K K+++A + ++D++ I P+++TYNT++ G C AQ+L ++M T I PD
Sbjct: 386 KMGKFVEASL-LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDV 444
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILG-LRINHEVEQAEELL 292
++Y L+ G+ + G + A V DEML+ GI P Y +G LR+ + ++A L
Sbjct: 445 ITYTTLVKGF-VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLG-DSDKAFRLH 502
Query: 293 KEMVSKGICTPDDKKYLILTD 313
+EMV+ PD Y + D
Sbjct: 503 EEMVATDHHAPDLTIYNVRID 523
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 153/353 (43%), Gaps = 67/353 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML G PT +TY + C ++ A+ELL M A D+ SYN +
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA-APDVV------------SYNTL 380
Query: 61 MY---KEGGLEEASDLLPEMLELESGLV-PHTLIYDTLIDECCTKGIGTKGSLDEIDKAV 116
M+ K G EAS L + L +G + P + Y+TLID C G ++ A
Sbjct: 381 MHGYIKMGKFVEASLLFDD---LRAGDIHPSIVTYNTLIDGLCESG--------NLEGAQ 429
Query: 117 AYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
K+EM ++ I P ++TYT L++ + G A ++ EM KG+K D Y Y T G
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE 489
Query: 177 AKCKYIDAHIGIYDEMVEK-RIQPNLLTYNTMMLGHCRCSEAQKLFD---KMKTSGIKPD 232
+ D +++EMV P+L YN + G C+ K + K+ G+ PD
Sbjct: 490 LRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 549
Query: 233 HLSYNLLIAGYSYRG----------------------------------GYVKEAFRVRD 258
H++Y +I GY G G +++AF+
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYST 609
Query: 259 EMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
EM K G+ P T++AL+ G+ +++A L +M +GI P+ Y +L
Sbjct: 610 EMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI-PPNKYSYTML 661
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 138/293 (47%), Gaps = 19/293 (6%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P + TY LV G + + A E+ EM R D YAY+ + + + G
Sbjct: 442 PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG----YAYTTRAVGEL--RLGDS 495
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
++A L EM+ + P IY+ ID C G + KA+ ++ ++ G+
Sbjct: 496 DKAFRLHEEMVATDHH-APDLTIYNVRIDGLCKVG--------NLVKAIEFQRKIFRVGL 546
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
P VTYT +I E G+ A ++ EM K L V TY L+ G+AK ++
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
EM ++ ++PN++T+N ++ G C+ EA + KM+ GI P+ SY +LI+
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+ +E ++ EML I+P T+ AL L +HE + E L + ++S
Sbjct: 667 DFEKW-EEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLLLS 718
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 6/201 (2%)
Query: 105 TKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKL 164
TK S+ E K + ++MI +G P++ ++++ L + A + + M E G+
Sbjct: 179 TKKSMAE--KFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 165 DVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLF 221
V T+NT++ K ++ I+ EM + I+ + +TYN ++ G + EA++
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 222 DKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRI 281
M+ SG S+N LI GY + G +A+ V DEML GI PT +TY+ I L
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYC-KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 282 NHEVEQAEELLKEMVSKGICT 302
++ A ELL M + + +
Sbjct: 356 FGRIDDARELLSSMAAPDVVS 376
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 161/311 (51%), Gaps = 21/311 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ G P TTY++L++ C +V + +++ +M+ + D LV ++ S +
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD--LVCFS----SMMSL 384
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G L++A L+ E+GL+P +IY LI C KG+ I A+ ++
Sbjct: 385 FTRSGNLDKA--LMYFNSVKEAGLIPDNVIYTILIQGYCRKGM--------ISVAMNLRN 434
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+ +G +VTY ++ L + A+ + EM E+ L D YT L+ G+ K
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYN 237
+ + ++ +M EKRI+ +++TYNT++ G + + A++++ M + I P +SY+
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+L+ + G++ EAFRV DEM+ I PT +++I G + E L++M+S
Sbjct: 555 ILVNALCSK-GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 298 KGICTPDDKKY 308
+G PD Y
Sbjct: 614 EGF-VPDCISY 623
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 23/311 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ G + TY ++ G C + +A +L EM + DS + +
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC---- 491
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G L+ A +L +M E L + Y+TL+D G G G +ID A
Sbjct: 492 --KLGNLQNAMELFQKMKEKRIRL--DVVTYNTLLD-----GFGKVG---DIDTAKEIWA 539
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+S+ I PT ++Y++L+ AL G A + EM K +K V N+++ GY +
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMK-----TSGIKPDHLS 235
++M+ + P+ ++YNT++ G R K F +K G+ PD +
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
YN ++ G+ R +KEA V +M++ G++P +TY +I G + +A + EM
Sbjct: 660 YNSILHGFC-RQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Query: 296 VSKGICTPDDK 306
+ +G +PDDK
Sbjct: 719 LQRGF-SPDDK 728
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 147/312 (47%), Gaps = 21/312 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF +I AL+ VE A + +E+ R SG+ Y+ N + K+
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISR------SGVGINVYTLNIMVNALCKD 248
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G +E+ L ++ E G+ P + Y+TLI +KG+ +++A + M
Sbjct: 249 GKMEKVGTFLSQVQE--KGVYPDIVTYNTLISAYSSKGL--------MEEAFELMNAMPG 298
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+G P + TY +I L + G+ A+++ EM GL D TY +L+ K +
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKL---FDKMKTSGIKPDHLSYNLLIA 241
++ +M + + P+L+ +++MM R K F+ +K +G+ PD++ Y +LI
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
GY R G + A +R+EML+ G TY+ ++ GL + +A++L EM + +
Sbjct: 419 GYC-RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL- 476
Query: 302 TPDDKKYLILTD 313
PD IL D
Sbjct: 477 FPDSYTLTILID 488
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
+ LLI + + A + ++ KG + + N L+ + +++ G+Y E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 193 VEKRIQPNLLTYNTMMLGHCRCSEAQKL---FDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
+ N+ T N M+ C+ + +K+ +++ G+ PD ++YN LI+ YS + G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK-GL 285
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
++EAF + + M G P TY+ +I GL + + E+A+E+ EM+ G+ +PD Y
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL-SPDSTTY 343
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 5/184 (2%)
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
S+G +I LI +L +G A + +E+ G+ ++VYT N +++ K ++
Sbjct: 193 SKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKME 252
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLI 240
++ EK + P+++TYNT++ + EA +L + M G P +YN +I
Sbjct: 253 KVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVI 312
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G G Y + A V EML++G+ P TTY +L++ +V + E++ +M S+ +
Sbjct: 313 NGLCKHGKY-ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 301 CTPD 304
PD
Sbjct: 372 -VPD 374
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 156/311 (50%), Gaps = 56/311 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K+G++P I T +L+ G C + +A L+ +M FV
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM----------------------FV 179
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+G P+T+ ++TLI G+ E A+A D
Sbjct: 180 ---------------------TGYQPNTVTFNTLI-----HGLFLHNKASE---AMALID 210
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+++G +P +VTY +++ L + G + A +++ +M++ L+ V YNT++ G K K
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
++D + ++ EM K I+PN++TY++++ C R S+A +L M I PD +++
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 330
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI + G V EA ++ DEM+K IDP+ TY +LI G ++ +++A+++ + MVS
Sbjct: 331 ALIDAFVKEGKLV-EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 298 KGICTPDDKKY 308
K C PD Y
Sbjct: 390 KH-CFPDVVTY 399
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 161/322 (50%), Gaps = 21/322 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ +P + T+ AL+ ++ +A++L EM + S D +V Y+ N F
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS--IDPSIVTYSSLING--FC 372
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
M+ L+EA + M+ P + Y+TLI C +++ +
Sbjct: 373 MHDR--LDEAKQMFEFMVSKHC--FPDVVTYNTLIKGFC--------KYKRVEEGMEVFR 420
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM RG+ VTY +LI+ LF+ G A+++ KEM G+ ++ TYNTL+ G K
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQ---KLFDKMKTSGIKPDHLSYN 237
++ + +++ + +++P + TYN M+ G C+ + + LF + G+KPD ++YN
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+I+G+ R G +EA + EM ++G P Y+ LI + + E + EL+KEM S
Sbjct: 541 TMISGFC-RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Query: 298 KGICTPDDKKYLILTDMVHRER 319
G D ++T+M+H R
Sbjct: 600 CGF-AGDASTIGLVTNMLHDGR 620
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 59/328 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M G+ P T+ L+ G H++ +A L+ M D LV Y N
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD--LVTYGVVVNG---- 230
Query: 61 MYKEGGLEEASDLLPEMLELESG-LVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ K G + A +LL +M E G L P LIY+T+ID C +D A+
Sbjct: 231 LCKRGDTDLAFNLLNKM---EQGKLEPGVLIYNTIIDGLC--------KYKHMDDALNLF 279
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK- 178
EM ++GI P +VTY+ LI L GR A ++ +M E+ + DV+T++ L+ + K
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTY---------------------------------- 204
K ++A +YDEMV++ I P+++TY
Sbjct: 340 GKLVEAE-KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 205 -NTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEM 260
NT++ G C R E ++F +M G+ + ++YN+LI G ++ G A + EM
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL-FQAGDCDMAQEIFKEM 457
Query: 261 LKNGIDPTFTTYDALILGLRINHEVEQA 288
+ +G+ P TY+ L+ GL N ++E+A
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 107/204 (52%), Gaps = 4/204 (1%)
Query: 100 TKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQE 159
+K + +++ D ++ ++M + GI TY++LI + A ++ +M +
Sbjct: 85 SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 144
Query: 160 KGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSE 216
G + ++ T ++L++GY K I + + D+M QPN +T+NT++ G H + SE
Sbjct: 145 LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204
Query: 217 AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
A L D+M G +PD ++Y +++ G RG AF + ++M + ++P Y+ +I
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD-TDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 277 LGLRINHEVEQAEELLKEMVSKGI 300
GL ++ A L KEM +KGI
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGI 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
++D AVA EM+ P+I+ ++ L+ A+ ++ + + ++MQ G+ + YTY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
L++ + + + + + +M++ +PN++T ++++ G+C R SEA L D+M +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
G +P+ +++N LI G + EA + D M+ G P TY ++ GL + +
Sbjct: 181 GYQPNTVTFNTLIHGL-FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 288 AEELLKEM 295
A LL +M
Sbjct: 240 AFNLLNKM 247
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 156/310 (50%), Gaps = 21/310 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G I TY L+ G C + +LL++M + + +V ++ +S+ KE
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK--INPNVVTFSVLIDSF----VKE 346
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G L EA +L EM+ G+ P T+ Y +LID C + + +DKA D M+S
Sbjct: 347 GKLREAEELHKEMIH--RGIAPDTITYTSLIDGFCKE--------NHLDKANQMVDLMVS 396
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+G +P I T+ +LI + R ++ ++M +G+ D TYNTL+ G+ + ++
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIA 241
++ EMV +++ PN++TY ++ G C E++K +F+K++ S ++ D YN++I
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
G V +A+ + + G+ P TY+ +I GL + +AE L ++M G
Sbjct: 517 GMC-NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH- 574
Query: 302 TPDDKKYLIL 311
PD Y IL
Sbjct: 575 APDGWTYNIL 584
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 158/354 (44%), Gaps = 62/354 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSD-------------SG- 46
++K+G++P T+ L+ G C V +A EL+ M D SG
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 47 ----------LVRYAYSDNSYNF-----VMYKEGGLEEASDLLPEMLELESGL--VPHTL 89
+V Y N+ + VM K G A +LL +M E L V +++
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 90 IYD------------TLIDECCTKGIGTK-----------GSLDEIDKAVAYKDEMISRG 126
I D L +E KGI T + D +MI R
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
I P +VT+++LI++ + G+ AE++ KEM +G+ D TY +L+ G+ K ++D
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ D MV K PN+ T+N ++ G+C R + +LF KM G+ D ++YN LI G+
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 244 SYRG--GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
G KE F+ EM+ + P TY L+ GL N E E+A E+ +++
Sbjct: 449 CELGKLNVAKELFQ---EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 146/275 (53%), Gaps = 20/275 (7%)
Query: 47 LVRYAYSDNSYNFV-----MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTK 101
+++ Y N+ F + EG + EA +L+ M+E+ G P + +TL++ C
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM--GHKPDLITINTLVNGLCLS 206
Query: 102 GIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG 161
G + +A+ D+M+ G +P VTY ++ + + G++ A +++++M+E+
Sbjct: 207 G--------KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 162 LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQ 218
+KLD Y+ ++ G K +D +++EM K I N++TYN ++ G C R +
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 219 KLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILG 278
KL M I P+ +++++LI + + G ++EA + EM+ GI P TY +LI G
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSF-VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 279 LRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+ +++A +++ MVSKG C P+ + + IL +
Sbjct: 378 FCKENHLDKANQMVDLMVSKG-CDPNIRTFNILIN 411
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 20/279 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P TY +L+ G C + +++A +++ M S D + + N Y
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM--VSKGCDPNIRTFNILINGYCKA 416
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ GLE L + L G+V T+ Y+TLI C G +++ A
Sbjct: 417 NRIDDGLE-----LFRKMSLR-GVVADTVTYNTLIQGFCELG--------KLNVAKELFQ 462
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+SR + P IVTY +L++ L + G S A ++ +++++ ++LD+ YN ++ G
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
+D ++ + K ++P + TYN M+ G C+ SEA+ LF KM+ G PD +YN
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
+LI + G K + ++ +E+ + G +T +I
Sbjct: 583 ILIRAHLGDGDATK-SVKLIEELKRCGFSVDASTIKMVI 620
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 108/242 (44%), Gaps = 40/242 (16%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A + ++I G EP +T++ LI L GR A +++ M E G K D+ T NTL++
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE------------------ 216
G + + D+MVE QPN +TY ++ C+ +
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 217 --------------------AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRV 256
A LF++M+ GI + ++YN+LI G+ G + A +
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 257 RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVH 316
RD M+K I+P T+ LI ++ +AEEL KEM+ +GI PD Y L D
Sbjct: 322 RD-MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI-APDTITYTSLIDGFC 379
Query: 317 RE 318
+E
Sbjct: 380 KE 381
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 130/311 (41%), Gaps = 55/311 (17%)
Query: 51 AYSDNSYNFVMYKEGGL-----EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGT 105
A+SD + ++ GL ++A DL +M+ H+ T+ID ++
Sbjct: 48 AFSDRNLSYRERLRSGLVDIKADDAIDLFRDMI--------HSRPLPTVIDF--SRLFSA 97
Query: 106 KGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLD 165
+ D +A +M +GI + T +++I + A + ++ + G + +
Sbjct: 98 IAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN 157
Query: 166 VYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFD 222
T++TL++G + + + D MVE +P+L+T NT++ G C + +EA L D
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 217
Query: 223 KMKTSGIKP-----------------------------------DHLSYNLLIAGYSYRG 247
KM G +P D + Y+++I G +
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC-KH 276
Query: 248 GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKK 307
G + AF + +EM GI TY+ LI G + +LL++M+ + I P+
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI-NPNVVT 335
Query: 308 YLILTDMVHRE 318
+ +L D +E
Sbjct: 336 FSVLIDSFVKE 346
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 154/316 (48%), Gaps = 56/316 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K+G++P I T +L+ G C + A L+ +M
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM------------------------ 179
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+E G P T + TLI G+ E AVA D
Sbjct: 180 -------------------VEMGYKPDTFTFTTLI-----HGLFLHNKASE---AVALVD 212
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+ RG +P +VTY ++ L + G A +++ +M+ +K +V +NT++ K +
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR 272
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+++ + ++ EM K I+PN++TYN+++ C R S+A +L M I P+ +++N
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI + ++ G + EA ++ +EM++ IDP TY+ LI G +++ +++A+++ K MVS
Sbjct: 333 ALIDAF-FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 298 KGICTPDDKKYLILTD 313
K C P+ + Y L +
Sbjct: 392 KD-CLPNIQTYNTLIN 406
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 154/342 (45%), Gaps = 37/342 (10%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + TY +L+ C + A LL S+M + + + N+ +KE
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLL------SNMLEKKINPNVVTFNALIDAFFKE 341
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLI---------DEC-----------CTKGIG 104
G L EA L EM++ + P T+ Y+ LI DE C I
Sbjct: 342 GKLVEAEKLHEEMIQ--RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 105 TKGSL-------DEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM 157
T +L ++ V EM RG+ VTYT +I+ F+ G A+ + K+M
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 158 QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEA 217
+ D+ TY+ L+ G +D + I+ + + ++ N+ YNTM+ G C+ +
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 218 QKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALIL 277
+ +D + IKPD ++YN +I+G + ++EA + +M ++G P TY+ LI
Sbjct: 520 GEAWDLFCSLSIKPDVVTYNTMISGLCSK-RLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 278 GLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
+ + + EL+KEM S G D ++T+M+H R
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGF-VGDASTISLVTNMLHDGR 619
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
+++A DL +M++ S P + ++ L+ +++ + ++ ++M + G
Sbjct: 64 VDDAVDLFGDMVK--SRPFPSIVEFNKLLSAV--------AKMNKFELVISLGEQMQTLG 113
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
I + TY++ I + A ++ +M + G + D+ T ++L++GY K I +
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ D+MVE +P+ T+ T++ G H + SEA L D+M G +PD ++Y ++ G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
RG + A + ++M I ++ +I L VE A +L EM +KGI
Sbjct: 234 CKRGD-IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
++D AV +M+ P+IV + L+ A+ ++ + + ++MQ G+ D+YTY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
++ + + + + + +M++ +P+++T ++++ G+C R S+A L D+M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
G KPD ++ LI G + EA + D+M++ G P TY ++ GL +++
Sbjct: 183 GYKPDTFTFTTLIHGL-FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 288 AEELLKEM 295
A LL +M
Sbjct: 242 ALNLLNKM 249
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 153/314 (48%), Gaps = 21/314 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML P L+ G C H + +A EL + + G V + N+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL------NKGFVVDTRTSNALLHG 514
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ + G L+EA + E+L G V + Y+TLI CC K ++D+A + D
Sbjct: 515 LCEAGKLDEAFRIQKEILG--RGCVMDRVSYNTLISGCCGK--------KKLDEAFMFLD 564
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+ RG++P TY++LI LF + + A + + G+ DVYTY+ ++ G K +
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYN 237
+ +DEM+ K +QPN + YN ++ +CR S A +L + MK GI P+ +Y
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G S V+EA + +EM G++P Y ALI G ++ + E LL+EM S
Sbjct: 685 SLIKGMSII-SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743
Query: 298 KGICTPDDKKYLIL 311
K + P+ Y ++
Sbjct: 744 KNV-HPNKITYTVM 756
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 131/266 (49%), Gaps = 28/266 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K G P TY L+ G ++VE+A + + KR + D Y YS V
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV----YTYS------V 615
Query: 61 MY----KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV 116
M K EE + EM+ + P+T++Y+ LI C G + A+
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMS--KNVQPNTVVYNHLIRAYCRSG--------RLSMAL 665
Query: 117 AYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
+++M +GI P TYT LI+ + + R A+ + +EM+ +GL+ +V+ Y L+ GY
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 177 AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDH 233
K + + EM K + PN +TY M+ G+ R +EA +L ++M+ GI PD
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDE 259
++Y I GY +GG V EAF+ DE
Sbjct: 786 ITYKEFIYGYLKQGG-VLEAFKGSDE 810
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 144/299 (48%), Gaps = 21/299 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P+ TT L+ +E ++ E A D+ G+ Y + K
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCE-------AFDVVCKGVSPDVYLFTTAINAFCKG 273
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G +EEA L +M E +G+ P+ + ++T+ID G+G G DE A +K++M+
Sbjct: 274 GKVEEAVKLFSKMEE--AGVAPNVVTFNTVID-----GLGMCGRYDE---AFMFKEKMVE 323
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
RG+EPT++TY++L++ L R A ++KEM +KG +V YN L+ + + ++
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIA 241
I I D MV K + TYNT++ G+C+ + A++L +M + G + S+ +I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ A R EML + P LI GL + + +A EL + ++KG
Sbjct: 444 LLCSHLMF-DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 132/271 (48%), Gaps = 20/271 (7%)
Query: 11 TTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEA 70
+Y L+ GCC ++++A L EM + D+ Y YS ++ +EEA
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN----YTYSILICG--LFNMNKVEEA 594
Query: 71 SDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPT 130
+ +G++P Y +ID CC + ++ + DEM+S+ ++P
Sbjct: 595 IQFWDDCKR--NGMLPDVYTYSVMIDGCCKA--------ERTEEGQEFFDEMMSKNVQPN 644
Query: 131 IVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD 190
V Y LI A GR A ++ ++M+ KG+ + TY +L+ G + ++ +++
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Query: 191 EMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRG 247
EM + ++PN+ Y ++ G+ + + K L +M + + P+ ++Y ++I GY+ R
Sbjct: 705 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA-RD 763
Query: 248 GYVKEAFRVRDEMLKNGIDPTFTTYDALILG 278
G V EA R+ +EM + GI P TY I G
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 149/330 (45%), Gaps = 39/330 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G +PT+ TY LV G + A +LKEM + + Y++ +F+
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV----IVYNNLIDSFI 376
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG--------------IG-- 104
+ G L +A ++ + L + GL + Y+TLI C G IG
Sbjct: 377 --EAGSLNKAIEI--KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 105 -TKGSLDEI----------DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDM 153
+GS + D A+ + EM+ R + P T LI L + G+ A ++
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 154 IKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC- 212
+ KG +D T N L+ G + +D I E++ + + ++YNT++ G C
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 213 --RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFT 270
+ EA D+M G+KPD+ +Y++LI G + V+EA + D+ +NG+ P
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL-FNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 271 TYDALILGLRINHEVEQAEELLKEMVSKGI 300
TY +I G E+ +E EM+SK +
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 153/314 (48%), Gaps = 21/314 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML P L+ G C H + +A EL + + G V + N+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL------NKGFVVDTRTSNALLHG 514
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ + G L+EA + E+L G V + Y+TLI CC K ++D+A + D
Sbjct: 515 LCEAGKLDEAFRIQKEILG--RGCVMDRVSYNTLISGCCGK--------KKLDEAFMFLD 564
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+ RG++P TY++LI LF + + A + + G+ DVYTY+ ++ G K +
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYN 237
+ +DEM+ K +QPN + YN ++ +CR S A +L + MK GI P+ +Y
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G S V+EA + +EM G++P Y ALI G ++ + E LL+EM S
Sbjct: 685 SLIKGMSII-SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743
Query: 298 KGICTPDDKKYLIL 311
K + P+ Y ++
Sbjct: 744 KNV-HPNKITYTVM 756
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 131/266 (49%), Gaps = 28/266 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K G P TY L+ G ++VE+A + + KR + D Y YS V
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV----YTYS------V 615
Query: 61 MY----KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV 116
M K EE + EM+ + P+T++Y+ LI C G + A+
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMS--KNVQPNTVVYNHLIRAYCRSG--------RLSMAL 665
Query: 117 AYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
+++M +GI P TYT LI+ + + R A+ + +EM+ +GL+ +V+ Y L+ GY
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 177 AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDH 233
K + + EM K + PN +TY M+ G+ R +EA +L ++M+ GI PD
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDE 259
++Y I GY +GG V EAF+ DE
Sbjct: 786 ITYKEFIYGYLKQGG-VLEAFKGSDE 810
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 144/299 (48%), Gaps = 21/299 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P+ TT L+ +E ++ E A D+ G+ Y + K
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCE-------AFDVVCKGVSPDVYLFTTAINAFCKG 273
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G +EEA L +M E +G+ P+ + ++T+ID G+G G DE A +K++M+
Sbjct: 274 GKVEEAVKLFSKMEE--AGVAPNVVTFNTVID-----GLGMCGRYDE---AFMFKEKMVE 323
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
RG+EPT++TY++L++ L R A ++KEM +KG +V YN L+ + + ++
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIA 241
I I D MV K + TYNT++ G+C+ + A++L +M + G + S+ +I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ A R EML + P LI GL + + +A EL + ++KG
Sbjct: 444 LLCSHLMF-DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 132/271 (48%), Gaps = 20/271 (7%)
Query: 11 TTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEA 70
+Y L+ GCC ++++A L EM + D+ Y YS ++ +EEA
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN----YTYSILICG--LFNMNKVEEA 594
Query: 71 SDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPT 130
+ +G++P Y +ID CC + ++ + DEM+S+ ++P
Sbjct: 595 IQFWDDCKR--NGMLPDVYTYSVMIDGCCKA--------ERTEEGQEFFDEMMSKNVQPN 644
Query: 131 IVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD 190
V Y LI A GR A ++ ++M+ KG+ + TY +L+ G + ++ +++
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Query: 191 EMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRG 247
EM + ++PN+ Y ++ G+ + + K L +M + + P+ ++Y ++I GY+ R
Sbjct: 705 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA-RD 763
Query: 248 GYVKEAFRVRDEMLKNGIDPTFTTYDALILG 278
G V EA R+ +EM + GI P TY I G
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 149/330 (45%), Gaps = 39/330 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G +PT+ TY LV G + A +LKEM + + Y++ +F+
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV----IVYNNLIDSFI 376
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG--------------IG-- 104
+ G L +A ++ + L + GL + Y+TLI C G IG
Sbjct: 377 --EAGSLNKAIEI--KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 105 -TKGSLDEI----------DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDM 153
+GS + D A+ + EM+ R + P T LI L + G+ A ++
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 154 IKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC- 212
+ KG +D T N L+ G + +D I E++ + + ++YNT++ G C
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 213 --RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFT 270
+ EA D+M G+KPD+ +Y++LI G + V+EA + D+ +NG+ P
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL-FNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 271 TYDALILGLRINHEVEQAEELLKEMVSKGI 300
TY +I G E+ +E EM+SK +
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 138/273 (50%), Gaps = 15/273 (5%)
Query: 44 DSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGI 103
D+G Y N KEG + +A + E+ + L P + ++TLI+ C G
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK--RSLQPTVVSFNTLINGYCKVG- 289
Query: 104 GTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLK 163
+D+ K +M P + TY+ LI AL + + GA + EM ++GL
Sbjct: 290 -------NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
Query: 164 LDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKL 220
+ + TL+ G+++ ID Y +M+ K +QP+++ YNT++ G C+ + A+ +
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 221 FDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLR 280
D M G++PD ++Y LI G+ RGG V+ A +R EM +NGI+ + AL+ G+
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFC-RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC 461
Query: 281 INHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
V AE L+EM+ GI PDD Y ++ D
Sbjct: 462 KEGRVIDAERALREMLRAGI-KPDDVTYTMMMD 493
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 160/360 (44%), Gaps = 66/360 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+L GF + + L+ C + A+++ E+ + S +V + N Y
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS--LQPTVVSFNTLINGY--- 285
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G L+E L +M + S P Y LI+ C + +++D A D
Sbjct: 286 -CKVGNLDEGFRLKHQMEK--SRTRPDVFTYSALINALCKE--------NKMDGAHGLFD 334
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAE-DMIKE----MQEKGLKLDVYTYNTLMSG 175
EM RG+ P V +T LI G S E D++KE M KGL+ D+ YNTL++G
Sbjct: 335 EMCKRGLIPNDVIFTTLIH-----GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---------------------- 213
+ K + A I D M+ + ++P+ +TY T++ G CR
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD 449
Query: 214 -----------CSE-----AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVR 257
C E A++ +M +GIKPD ++Y +++ + +G + F++
Sbjct: 450 RVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD-AQTGFKLL 508
Query: 258 DEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHR 317
EM +G P+ TY+ L+ GL +++ A+ LL M++ G+ PDD Y L + HR
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV-VPDDITYNTLLEGHHR 567
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 102/198 (51%), Gaps = 9/198 (4%)
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
E++ G + + +L+ + G A+ + E+ ++ L+ V ++NTL++GY K
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYN 237
+D + +M + R +P++ TY+ ++ C+ ++ A LFD+M G+ P+ + +
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 238 LLIAGYSYRG--GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
LI G+S G +KE+++ +ML G+ P Y+ L+ G N ++ A ++ M
Sbjct: 350 TLIHGHSRNGEIDLMKESYQ---KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 296 VSKGICTPDDKKYLILTD 313
+ +G+ PD Y L D
Sbjct: 407 IRRGL-RPDKITYTTLID 423
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 16/240 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML G P I Y LV G C + ++ A+ ++ M R D + Y+ F
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD----KITYTTLIDGFC 426
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G +E A ++ EM + +G+ + + L+ C +G ID A +
Sbjct: 427 --RGGDVETALEIRKEMDQ--NGIELDRVGFSALVCGMCKEG-------RVIDAERALR- 474
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+ GI+P VTYT++++A + G + ++KEMQ G V TYN L++G K
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
+ + D M+ + P+ +TYNT++ GH R + + K + + GI D SY ++
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIV 594
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 172/347 (49%), Gaps = 48/347 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEM----------------------KR 38
M+K+G++P I T +L+ G C + +A L+ +M +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 39 ASD---MSDSGLVRYAYSD-NSYNFV---MYKEGGLEEASDLLPEMLELESGLV-PHTLI 90
AS+ + D + R D +Y V + K G ++ A LL +M E G + +I
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM---EKGKIEADVVI 257
Query: 91 YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
Y T+ID C + ++ A+ EM ++GI P +VTY LI L GR A
Sbjct: 258 YTTIIDALC--------NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAK-CKYIDAHIGIYDEMVEKRIQPNLLTYNTMML 209
++ +M E+ + +V T++ L+ + K K ++A +YDEM+++ I P++ TY++++
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE-KLYDEMIKRSIDPDIFTYSSLIN 368
Query: 210 GHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID 266
G C R EA+ +F+ M + P+ ++YN LI G+ + V+E + EM + G+
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC-KAKRVEEGMELFREMSQRGLV 427
Query: 267 PTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
TY+ LI GL + + A+++ K+MVS G+ PD Y IL D
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV-PPDIITYSILLD 473
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 159/316 (50%), Gaps = 21/316 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P + TY +V G C +++ A LLK+M++ +D + Y+
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI----YTTIIDALC 266
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
YK + +A +L EM G+ P+ + Y++LI C G + S
Sbjct: 267 NYKN--VNDALNLFTEMDN--KGIRPNVVTYNSLIRCLCNYGRWSDAS--------RLLS 314
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+MI R I P +VT++ LI+A + G+ AE + EM ++ + D++TY++L++G+
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+D +++ M+ K PN++TYNT++ G C R E +LF +M G+ + ++YN
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G ++ G A ++ +M+ +G+ P TY L+ GL ++E+A + E +
Sbjct: 435 TLIQGL-FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF-EYLQ 492
Query: 298 KGICTPDDKKYLILTD 313
K PD Y I+ +
Sbjct: 493 KSKMEPDIYTYNIMIE 508
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 157/322 (48%), Gaps = 21/322 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ +P + T+ AL+ ++ +A++L EM + S D + YS F
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI----FTYSSLINGFC 371
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
M+ L+EA + M+ + P+ + Y+TLI C +++ +
Sbjct: 372 MHDR--LDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKA--------KRVEEGMELFR 419
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM RG+ VTY LI+ LF+ G A+ + K+M G+ D+ TY+ L+ G K
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYN 237
++ + +++ + + +++P++ TYN M+ G C+ + + LF + G+KP+ + Y
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+I+G+ R G +EA + EM ++G P TY+ LI + + + EL+KEM S
Sbjct: 540 TMISGFC-RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 298 KGICTPDDKKYLILTDMVHRER 319
G D ++ +M+H R
Sbjct: 599 CGF-VGDASTISMVINMLHDGR 619
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 14/237 (5%)
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
L++A DL EM++ S +P + ++ L+ +++ D ++ + M +
Sbjct: 61 LDDAVDLFGEMVQ--SRPLPSIVEFNKLLSAI--------AKMNKFDLVISLGERMQNLR 110
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
I + +Y +LI + A ++ +M + G + D+ T ++L++GY K I +
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ D+M QPN +T+NT++ G H + SEA L D+M G +PD +Y ++ G
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
RG + A + +M K I+ Y +I L V A L EM +KGI
Sbjct: 231 CKRGD-IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
++D AV EM+ P+IV + L+ A+ ++ + + + MQ + D+Y+YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
L++ + + + + + +M++ +P+++T ++++ G+C R SEA L D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
+P+ +++N LI G + EA + D M+ G P TY ++ GL +++
Sbjct: 180 EYQPNTVTFNTLIHGL-FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 288 AEELLKEM 295
A LLK+M
Sbjct: 239 ALSLLKKM 246
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 157/321 (48%), Gaps = 22/321 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G P I TY L+ C+ + E+A+ELL +M M + ++ Y N Y
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN--VITYNALINGY--- 403
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G +E+A D++ E++E L P+T Y+ LI C + KA+ +
Sbjct: 404 -CKRGMIEDAVDVV-ELME-SRKLSPNTRTYNELIKGYCKSNV---------HKAMGVLN 451
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+ R + P +VTY LI+ G A ++ M ++GL D +TY +++ K K
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
++ ++D + +K + PN++ Y ++ G+C+ EA + +KM + P+ L++N
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G G +KEA + ++M+K G+ PT +T LI L + + + A ++M+S
Sbjct: 572 ALIHGLC-ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630
Query: 298 KGICTPDDKKYLILTDMVHRE 318
G PD Y RE
Sbjct: 631 SGT-KPDAHTYTTFIQTYCRE 650
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 157/315 (49%), Gaps = 20/315 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+++ G DP TY +L++G C +++ A ++ EM + AY+ +
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRN----EVAYTHLIHGLC 299
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ + ++EA DL +M + E P Y LI C GS + +A+
Sbjct: 300 VARR--IDEAMDLFVKMKDDEC--FPTVRTYTVLIKSLC-------GS-ERKSEALNLVK 347
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM GI+P I TYT+LI++L + A +++ +M EKGL +V TYN L++GY K
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS--EAQKLFDKMKTSGIKPDHLSYNL 238
I+ + + + M +++ PN TYN ++ G+C+ + +A + +KM + PD ++YN
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
LI G R G A+R+ M G+ P TY ++I L + VE+A +L + K
Sbjct: 468 LIDGQC-RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 299 GICTPDDKKYLILTD 313
G+ P+ Y L D
Sbjct: 527 GV-NPNVVMYTALID 540
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 91 YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
Y+TL++ + G +DE+ + EM+ + P I TY ++ ++G A
Sbjct: 186 YNTLLN-----SLARFGLVDEMKQVYM---EMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
+ ++ E GL D +TY +L+ GY + K +D+ +++EM K + N + Y ++ G
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 211 HC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVK-EAFRVRDEMLKNGID 266
C R EA LF KMK P +Y +LI S G K EA + EM + GI
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK--SLCGSERKSEALNLVKEMEETGIK 355
Query: 267 PTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
P TY LI L + E+A ELL +M+ KG+
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 145/317 (45%), Gaps = 39/317 (12%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G +P + Y AL+ G C +V++A +L++M + + +S + N+ + +
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS------LTFNALIHGLCAD 580
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G L+EA+ L +M+++ GL P LI G + D A + +M+S
Sbjct: 581 GKLKEATLLEEKMVKI--GLQPTVSTDTILIHRLLKDG--------DFDHAYSRFQQMLS 630
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G +P TYT I+ GR AEDM+ +M+E G+ D++TY++L+ GY +
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 185 HIGIYDEMVEKRIQPNLLTYNT-------MMLGHCRCSEAQ--------------KLFDK 223
+ M + +P+ T+ + M G + SE + +L +K
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 224 MKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKN-GIDPTFTTYDALILGLRIN 282
M + P+ SY LI G G ++ A +V D M +N GI P+ ++AL+
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGN-LRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 283 HEVEQAEELLKEMVSKG 299
+ +A +++ +M+ G
Sbjct: 810 KKHNEAAKVVDDMICVG 826
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 5/198 (2%)
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
KDE + I Y L+ +L G + + EM E + ++YTYN +++GY K
Sbjct: 171 KDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLS 235
++ ++VE + P+ TY ++++G+C+ A K+F++M G + + ++
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y LI G + EA + +M + PT TY LI L + +A L+KEM
Sbjct: 291 YTHLIHGLCV-ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 296 VSKGICTPDDKKYLILTD 313
GI P+ Y +L D
Sbjct: 350 EETGI-KPNIHTYTVLID 366
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 164/341 (48%), Gaps = 39/341 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRA-------------SDMSDSGL 47
M + GF+P + TY L+ C +++V+ AK+LL EM S M + GL
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 48 V--------RYAYSDNSYNFV---MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLID 96
V R+ + YN + + KE + A +L+ EM +E G+ P+ + Y TLI+
Sbjct: 232 VKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREM--VEKGISPNVISYSTLIN 289
Query: 97 ECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKE 156
C G +I+ A ++ +M+ RG P I T + L++ F G ++ A D+ +
Sbjct: 290 VLCNSG--------QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQ 341
Query: 157 M-QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS 215
M + GL+ +V YNTL+ G+ I + ++ M E PN+ TY +++ G +
Sbjct: 342 MIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 216 E---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTY 272
A +++KM TSG P+ + Y ++ R KEA + + M K P+ T+
Sbjct: 402 SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC-RHSKFKEAESLIEIMSKENCAPSVPTF 460
Query: 273 DALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+A I GL ++ AE++ ++M + C P+ Y L D
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 143/300 (47%), Gaps = 22/300 (7%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEG 65
F+P ++ Y AL+ G C H+ + A EL++EM + G+ S ++ V+ G
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREM------VEKGISPNVISYSTLINVLCNSG 295
Query: 66 GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISR 125
+E A L +ML+ G P+ +L+ C +G + D +D + +
Sbjct: 296 QIELAFSFLTQMLK--RGCHPNIYTLSSLVKGCFLRGT----TFDALD---LWNQMIRGF 346
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH 185
G++P +V Y L++ G A + M+E G ++ TY +L++G+AK +D
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 186 IGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAG 242
+ I+++M+ PN++ Y M+ CR S EA+ L + M P ++N I G
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 243 YSYRG--GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G + ++ FR ++ ++ P TY+ L+ GL + +E+A L +E+ +G+
Sbjct: 467 LCDAGRLDWAEKVFRQMEQ--QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 524
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 30/315 (9%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G DP++ Y ++ + ++ + ++MKR G ++ N + K
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKR------DGFEPNVFTYNVLLKALCKN 194
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
++ A LL EM G P + Y T+I C G+ +G E+
Sbjct: 195 NKVDGAKKLLVEMSN--KGCCPDAVSYTTVISSMCEVGLVKEGR------------ELAE 240
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
R EP + Y LI L + GA ++++EM EKG+ +V +Y+TL++ I+
Sbjct: 241 R-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIEL 299
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKM-KTSGIKPDHLSYNLLI 240
+M+++ PN+ T ++++ G +A L+++M + G++P+ ++YN L+
Sbjct: 300 AFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLV 359
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G+ G VK A V M + G P TY +LI G ++ A + +M++ G
Sbjct: 360 QGFCSHGNIVK-AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG- 417
Query: 301 CTPDDKKYLILTDMV 315
C P+ ++ T+MV
Sbjct: 418 CCPN---VVVYTNMV 429
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 122/307 (39%), Gaps = 46/307 (14%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + Y LV G C+H + +A + M+ + Y N + K
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG--CSPNIRTYGSLINGF----AKR 400
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECC------------------------- 99
G L+ A + +ML SG P+ ++Y +++ C
Sbjct: 401 GSLDGAVYIWNKMLT--SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 100 -----TKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMI 154
KG+ G LD +K ++ P IVTY L++ L + R A +
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQ--QHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516
Query: 155 KEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC 214
+E+ +G++ TYNTL+ G + + +M+ P+ +T N ++L +C+
Sbjct: 517 REIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQ 576
Query: 215 SEAQKLFDKMKTSGI-----KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTF 269
+A++ + +PD +SY +I G R ++ + + M+ GI P+
Sbjct: 577 GKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLC-RSNCREDGVILLERMISAGIVPSI 635
Query: 270 TTYDALI 276
T+ LI
Sbjct: 636 ATWSVLI 642
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 169/345 (48%), Gaps = 48/345 (13%)
Query: 3 KVGFDPTITTYKALVLGCCTHHEVEQAKELLK---EMKRASDMSD-----SGL------- 47
K+G++P T+ LV G C V +A L+ EMK+ D+ +GL
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 48 ---------VRYAYSDNSYNF-----VMYKEGGLEEASDLLPEMLE--LESGLVPHTLIY 91
V Y + + + + K G A DL +M E +++ +V ++++
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
D+L C G D A++ +EM +GI+ +VTY+ LI L G+
Sbjct: 253 DSL----CKDG--------SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
M++EM + + DV T++ L+ + K + +Y+EM+ + I P+ +TYN+++ G
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 212 CR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
C+ EA ++FD M + G +PD ++Y++LI Y + V + R+ E+ G+ P
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC-KAKRVDDGMRLFREISSKGLIPN 419
Query: 269 FTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
TY+ L+LG + ++ A+EL +EMVS+G+ P Y IL D
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGV-PPSVVTYGILLD 463
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 154/300 (51%), Gaps = 24/300 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ GF P TY ++ C A +L ++M+ + + +V+Y+ +S
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN--IKASVVQYSIVIDS---- 254
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K+G ++A L EM E++ G+ + Y +LI C G + D
Sbjct: 255 LCKDGSFDDALSLFNEM-EMK-GIKADVVTYSSLIGGLCNDG--------KWDDGAKMLR 304
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EMI R I P +VT++ LI+ + G+ A+++ EM +G+ D TYN+L+ G+ K
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ ++D MV K +P+++TY+ ++ +C R + +LF ++ + G+ P+ ++YN
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 238 LLIAGYSYRG--GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
L+ G+ G KE F+ EM+ G+ P+ TY L+ GL N E+ +A E+ ++M
Sbjct: 425 TLVLGFCQSGKLNAAKELFQ---EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 129/256 (50%), Gaps = 19/256 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P TY +L+ G C + + +A ++ M S + +V Y+ NSY
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM--VSKGCEPDIVTYSILINSY--- 395
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K +++ L E+ GL+P+T+ Y+TL+ C G +++ A
Sbjct: 396 -CKAKRVDDGMRLFREISS--KGLIPNTITYNTLVLGFCQSG--------KLNAAKELFQ 444
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+SRG+ P++VTY +L++ L + G A ++ ++MQ+ + L + YN ++ G
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
+D ++ + +K ++P+++TYN M+ G C+ SEA LF KMK G PD +YN
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYN 564
Query: 238 LLIAGYSYRGGYVKEA 253
+LI + G +
Sbjct: 565 ILIRAHLGGSGLISSV 580
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 48/289 (16%)
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
+ +A DL M++ S +P + ++ L C+ TK + D + + M G
Sbjct: 51 VNDAIDLFESMIQ--SRPLPTPIDFNRL----CSAVARTK----QYDLVLGFCKGMELNG 100
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
IE + T T++I + A ++ + G + D T++TL++G+ + +
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLL---- 239
+ D MVE + +P+L+T +T++ G C R SEA L D+M G +PD ++Y +
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 240 ------------------------IAGYSY------RGGYVKEAFRVRDEMLKNGIDPTF 269
+ YS + G +A + +EM GI
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 270 TTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
TY +LI GL + + + ++L+EM+ + I PD + L D+ +E
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNI-IPDVVTFSALIDVFVKE 328
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 152/311 (48%), Gaps = 21/311 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+++G+ P I Y A++ C V A + KE++R + +V Y N
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN--VVTYTALVNG---- 234
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ +A+ LL +M++ + P+ + Y L+D G ++ +A +
Sbjct: 235 LCNSSRWSDAARLLSDMIK--KKITPNVITYSALLDAFVKNG--------KVLEAKELFE 284
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+ I+P IVTY+ LI L R A M M KG DV +YNTL++G+ K K
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYN 237
++ + ++ EM ++ + N +TYNT++ G + + AQ+ F +M GI PD +YN
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+L+ G G +++A + ++M K +D TY +I G+ +VE+A L +
Sbjct: 405 ILLGGLC-DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 298 KGICTPDDKKY 308
KG+ PD Y
Sbjct: 464 KGL-KPDIVTY 473
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 147/301 (48%), Gaps = 26/301 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDN--SYN 58
MLK+G++P T +LV G C + V A L+ +M V Y + +YN
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM-----------VEIGYKPDIVAYN 194
Query: 59 FVMYKEGGLEEASDLLPEMLELE-SGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
++ + +D E+E G+ P+ + Y L++ C A
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS--------RWSDAAR 246
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
+MI + I P ++TY+ L++A + G+ A+++ +EM + D+ TY++L++G
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHL 234
ID ++D MV K ++++YNT++ G C R + KLF +M G+ + +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
+YN LI G+ ++ G V +A +M GI P TY+ L+ GL N E+E+A + ++
Sbjct: 367 TYNTLIQGF-FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 295 M 295
M
Sbjct: 426 M 426
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 5/206 (2%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
++ A++ +M+ G EP VT L+ R A ++ +M E G K D+ YN
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
++ K K ++ + E+ K I+PN++TY ++ G C R S+A +L M
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
I P+ ++Y+ L+ + + G V EA + +EM++ IDP TY +LI GL ++ +++
Sbjct: 255 KITPNVITYSALLDAF-VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 288 AEELLKEMVSKGICTPDDKKYLILTD 313
A ++ MVSKG C D Y L +
Sbjct: 314 ANQMFDLMVSKG-CLADVVSYNTLIN 338
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 119/232 (51%), Gaps = 19/232 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+++ DP I TY +L+ G C H +++A ++ M ++D +V Y N +
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD--VVSYNTLINGF--- 340
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K +E+ L EM + GLV +T+ Y+TLI +G G ++DKA +
Sbjct: 341 -CKAKRVEDGMKLFREMSQ--RGLVSNTVTYNTLI-----QGFFQAG---DVDKAQEFFS 389
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M GI P I TY +L+ L + G A + ++MQ++ + LD+ TY T++ G K
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGI 229
++ ++ + K ++P+++TY TMM G C E + L+ KMK G+
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 122/236 (51%), Gaps = 14/236 (5%)
Query: 70 ASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEP 129
A +L +ML+L G P + +L++ C + + + AV+ D+M+ G +P
Sbjct: 139 ALSILGKMLKL--GYEPDRVTIGSLVNGFCRR--------NRVSDAVSLVDKMVEIGYKP 188
Query: 130 TIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIY 189
IV Y +I++L + R A D KE++ KG++ +V TY L++G +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 190 DEMVEKRIQPNLLTYNTMM---LGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYR 246
+M++K+I PN++TY+ ++ + + + EA++LF++M I PD ++Y+ LI G
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 247 GGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICT 302
+ EA ++ D M+ G +Y+ LI G VE +L +EM +G+ +
Sbjct: 309 -DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 107/206 (51%), Gaps = 5/206 (2%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
+++ A+ +M+ P+IV + L+ A+ ++ + + K+M+ G++ D+YT+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
+++ + C + + I +M++ +P+ +T +++ G C R S+A L DKM
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
G KPD ++YN +I + V +AF E+ + GI P TY AL+ GL +
Sbjct: 185 GYKPDIVAYNAIIDSLC-KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 288 AEELLKEMVSKGICTPDDKKYLILTD 313
A LL +M+ K I TP+ Y L D
Sbjct: 244 AARLLSDMIKKKI-TPNVITYSALLD 268
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 150/300 (50%), Gaps = 24/300 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ GF P TY ++ C + A ELL++M+ D+ V+Y+ +
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDA--VKYSIIIDG---- 256
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K+G L+ A +L EM E++ G +IY TLI C G D
Sbjct: 257 LCKDGSLDNAFNLFNEM-EIK-GFKADIIIYTTLIRGFCYAG--------RWDDGAKLLR 306
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+MI R I P +V ++ LI+ + G+ AE++ KEM ++G+ D TY +L+ G+ K
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
+D + D MV K PN+ T+N ++ G+C+ + + +LF KM G+ D ++YN
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 238 LLIAGYSYRGG--YVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
LI G+ G KE F+ EM+ + P +Y L+ GL N E E+A E+ +++
Sbjct: 427 TLIQGFCELGKLEVAKELFQ---EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 136/253 (53%), Gaps = 15/253 (5%)
Query: 64 EGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMI 123
EG + EA +L+ M+E+ G P + + L++ C G ++ AV D M+
Sbjct: 155 EGRVSEALELVDRMVEM--GHKPTLITLNALVNGLCLNG--------KVSDAVLLIDRMV 204
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
G +P VTY +++ + + G++ A +++++M+E+ +KLD Y+ ++ G K +D
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
+++EM K + +++ Y T++ G C R + KL M I PD ++++ LI
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ + G ++EA + EM++ GI P TY +LI G +++++A +L MVSKG
Sbjct: 325 DCF-VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG- 382
Query: 301 CTPDDKKYLILTD 313
C P+ + + IL +
Sbjct: 383 CGPNIRTFNILIN 395
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 125/256 (48%), Gaps = 19/256 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G P TY +L+ G C +++++A +L M S + + N Y
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM--VSKGCGPNIRTFNILINGYCKA 400
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ GLE L + L G+V T+ Y+TLI C G +++ A
Sbjct: 401 NLIDDGLE-----LFRKMSLR-GVVADTVTYNTLIQGFCELG--------KLEVAKELFQ 446
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+SR + P IV+Y +L++ L + G A ++ +++++ ++LD+ YN ++ G
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
+D ++ + K ++P++ TYN M+ G C+ SEA LF KM+ G P+ +YN
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 238 LLIAGYSYRGGYVKEA 253
+LI + G K A
Sbjct: 567 ILIRAHLGEGDATKSA 582
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 138/334 (41%), Gaps = 64/334 (19%)
Query: 27 EQAKELLKEMKRASD----MSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELES 82
+ A +L +EM R+ + S L Y+ V+ DL +M EL+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVL----------DLCKQM-ELKG 102
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
+ H L +++ CC + ++ A + ++I G EP VT++ LI L
Sbjct: 103 --IAHNLYTLSIMINCCCR-------CRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
GR A +++ M E G K + T N L++G + + + D MVE QPN +
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
Query: 203 TYNTMMLGHCRCSE--------------------------------------AQKLFDKM 224
TY ++ C+ + A LF++M
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 225 KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHE 284
+ G K D + Y LI G+ Y G + A +RD M+K I P + ALI +
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD-MIKRKITPDVVAFSALIDCFVKEGK 332
Query: 285 VEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
+ +AEEL KEM+ +GI +PD Y L D +E
Sbjct: 333 LREAEELHKEMIQRGI-SPDTVTYTSLIDGFCKE 365
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 156/328 (47%), Gaps = 42/328 (12%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K+GF+P I T+ +L+ G C + +E+A ++ +M D +V Y +S
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD--VVMYTTIIDS---- 186
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG------------------ 102
+ K G + A L +M G+ P ++Y +L++ C G
Sbjct: 187 LCKNGHVNYALSLFDQMENY--GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 103 ---IGTKGSLDEIDKAVAYKD------EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDM 153
I +D K + D EMI I P I TYT LI G A M
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 154 IKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR 213
M+ KG DV Y +L++G+ KCK +D + I+ EM +K + N +TY T++ G +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 214 CSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK---NGIDP 267
+ AQ++F M + G+ P+ +YN+L+ Y G VK+A + ++M K +G+ P
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK-VKKALMIFEDMQKREMDGVAP 423
Query: 268 TFTTYDALILGLRINHEVEQAEELLKEM 295
TY+ L+ GL N ++E+A + ++M
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 147/322 (45%), Gaps = 28/322 (8%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + Y +LV G C A LL+ M + D + N+ KE
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD------VITFNALIDAFVKE 260
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G +A +L EM+ + + P+ Y +LI+ C +G +D+A M +
Sbjct: 261 GKFLDAEELYNEMIRMS--IAPNIFTYTSLINGFCMEGC--------VDEARQMFYLMET 310
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+G P +V YT LI + + A + EM +KGL + TY TL+ G+ + +
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRC-----SEAQKLFDKMK---TSGIKPDHLSY 236
++ MV + + PN+ TYN ++ HC C +A +F+ M+ G+ P+ +Y
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLL--HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
N+L+ G Y G +++A V ++M K +D TY +I G+ +V+ A L +
Sbjct: 429 NVLLHGLCYNGK-LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 297 SKGICTPDDKKYLILTDMVHRE 318
SKG+ P+ Y + + RE
Sbjct: 488 SKGV-KPNVVTYTTMISGLFRE 508
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 106/202 (52%), Gaps = 5/202 (2%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A ++ +M+ G EP IVT+T LI R A M+ +M E G+K DV Y T++
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKP 231
K +++ + ++D+M I+P+++ Y +++ G C R +A L M IKP
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
D +++N LI + G ++ +A + +EM++ I P TY +LI G + V++A ++
Sbjct: 246 DVITFNALIDAFVKEGKFL-DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 292 LKEMVSKGICTPDDKKYLILTD 313
M +KG C PD Y L +
Sbjct: 305 FYLMETKG-CFPDVVAYTSLIN 325
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 139/272 (51%), Gaps = 23/272 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+++ P I TY +L+ G C V++A+++ M+ D +V Y N +
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD--VVAYTSLINGF--- 327
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K +++A + EM + GL +T+ Y TLI +G G G + + ++
Sbjct: 328 -CKCKKVDDAMKIFYEMSQ--KGLTGNTITYTTLI-----QGFGQVGKPNVAQEVFSH-- 377
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEK---GLKLDVYTYNTLMSGYA 177
M+SRG+ P I TY +L+ L G+ A + ++MQ++ G+ +++TYN L+ G
Sbjct: 378 -MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHL 234
++ + ++++M ++ + ++TY ++ G C+ + A LF + + G+KP+ +
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID 266
+Y +I+G +R G EA + +M ++G+
Sbjct: 497 TYTTMISGL-FREGLKHEAHVLFRKMKEDGVS 527
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 117/250 (46%), Gaps = 15/250 (6%)
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
EA DL M+E S +P + + TK + + + D + D + G
Sbjct: 53 FNEALDLFTHMVE--SRPLPSIIDF--------TKLLNVIAKMKKFDVVINLCDHLQIMG 102
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
+ + T LL+ + + + A + +M + G + D+ T+ +L++G+ ++ +
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ ++MVE I+P+++ Y T++ C+ + A LFD+M+ GI+PD + Y L+ G
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
G + ++A + M K I P T++ALI + AEEL EM+ I P
Sbjct: 223 CNSGRW-RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI-AP 280
Query: 304 DDKKYLILTD 313
+ Y L +
Sbjct: 281 NIFTYTSLIN 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
+ ++A+ M+ P+I+ +T L+ + ++ + ++ +Q G+ D+YT N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
LM+ + + +M++ +P+++T+ +++ G C R EA + ++M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
GIKPD + Y +I + G+V A + D+M GI P Y +L+ GL +
Sbjct: 172 GIKPDVVMYTTIIDSLC-KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 288 AEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
A+ LL+ M + I PD + L D +E
Sbjct: 231 ADSLLRGMTKRKI-KPDVITFNALIDAFVKE 260
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 168/337 (49%), Gaps = 46/337 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRA---------SDMSDSGLVRYA 51
M++ G P + TY +V G C +++ A LL +M+ A S + DS L +Y
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS-LCKYR 274
Query: 52 YSDNSYN-FVMYKEGGLE--------------------EASDLLPEMLELESGLVPHTLI 90
+ D++ N F + G+ +AS LL +M+E + + P+ +
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK--INPNVVT 332
Query: 91 YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
++ LID +G L E +K DEMI R I+P I TY+ LI R A
Sbjct: 333 FNALID-----AFVKEGKLVEAEKLY---DEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
+ M + M K +V TYNTL++G+ K K ID + ++ EM ++ + N +TY T++ G
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 211 HCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
+ C AQ +F +M + G+ P+ ++YN L+ G + G +++A V + + ++ ++P
Sbjct: 445 FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC-KNGKLEKAMVVFEYLQRSKMEP 503
Query: 268 TFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
T TY+ +I G+ +VE +L + KG+ PD
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV-KPD 539
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 159/319 (49%), Gaps = 27/319 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+++G+ P T+ L+ G H++ +A L+ M + LV Y N
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNG---- 234
Query: 61 MYKEGGLEEASDLLPEM--LELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
+ K G ++ A +LL +M ++E+ +V IY T+ID C D A+
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVV----IYSTVIDSLC--------KYRHEDDALNL 282
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
EM ++G+ P ++TY+ LI L R A ++ +M E+ + +V T+N L+ + K
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 179 -CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHL 234
K ++A +YDEM+++ I P++ TY++++ G C R EA+ +F+ M + P+ +
Sbjct: 343 EGKLVEAE-KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
+YN LI G+ + + E + EM + G+ TY LI G + + A+ + K+
Sbjct: 402 TYNTLINGFC-KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 295 MVSKGICTPDDKKYLILTD 313
MVS G+ P+ Y L D
Sbjct: 461 MVSDGV-HPNIMTYNTLLD 478
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 160/316 (50%), Gaps = 21/316 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M ++G + TY L+ C ++ A LL +M + + +V + N Y
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG--YEPSIVTLSSLLNGY--- 165
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ +A L+ +M+E+ G P T+ + TLI G+ E AVA D
Sbjct: 166 -CHGKRISDAVALVDQMVEM--GYRPDTITFTTLI-----HGLFLHNKASE---AVALVD 214
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+ RG +P +VTY +++ L + G A +++ +M+ ++ +V Y+T++ K +
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYR 274
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ D + ++ EM K ++PN++TY++++ C R S+A +L M I P+ +++N
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI + G V EA ++ DEM+K IDP TY +LI G ++ +++A+ + + M+S
Sbjct: 335 ALIDAFVKEGKLV-EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 298 KGICTPDDKKYLILTD 313
K C P+ Y L +
Sbjct: 394 KD-CFPNVVTYNTLIN 408
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 132/270 (48%), Gaps = 20/270 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ +P + T+ AL+ ++ +A++L EM + S D + YS F
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI----FTYSSLINGFC 376
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
M+ L+EA + M+ + P+ + Y+TLI+ C ID+ V
Sbjct: 377 MHDR--LDEAKHMFELMISKDC--FPNVVTYNTLINGFCKA--------KRIDEGVELFR 424
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM RG+ VTYT LI F+ A+ + K+M G+ ++ TYNTL+ G K
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQ---KLFDKMKTSGIKPDHLSYN 237
++ + +++ + +++P + TYN M+ G C+ + + LF + G+KPD + YN
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
+I+G+ R G +EA + +M ++G P
Sbjct: 545 TMISGFC-RKGLKEEADALFRKMREDGPLP 573
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 118/235 (50%), Gaps = 19/235 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K DP I TY +L+ G C H +++AK + + M S +V Y N +
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTYNTLINGF--- 410
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K ++E +L EM + GLV +T+ Y TLI G + D + + +K
Sbjct: 411 -CKAKRIDEGVELFREMSQ--RGLVGNTVTYTTLIH-------GFFQARDCDNAQMVFK- 459
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+S G+ P I+TY L++ L + G+ A + + +Q ++ +YTYN ++ G K
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPD 232
++ ++ + K ++P+++ YNTM+ G CR EA LF KM+ G PD
Sbjct: 520 KVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 6/196 (3%)
Query: 109 LDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYT 168
+ + D ++ ++M GI + TY +LI + A ++ +M + G + + T
Sbjct: 98 MKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157
Query: 169 YNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMK 225
++L++GY K I + + D+MVE +P+ +T+ T++ G H + SEA L D+M
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 226 TSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL-RINHE 284
G +P+ ++Y +++ G RG + AF + ++M I+ Y +I L + HE
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGD-IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 285 VEQAEELLKEMVSKGI 300
+ A L EM +KG+
Sbjct: 277 -DDALNLFTEMENKGV 291
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 100/193 (51%), Gaps = 4/193 (2%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
++D A+ M+ P+I + L+ A+ ++ + + ++MQ G+ ++YTYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
L++ + + I + + +M++ +P+++T ++++ G+C R S+A L D+M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
G +PD +++ LI G + EA + D M++ G P TY ++ GL +++
Sbjct: 185 GYRPDTITFTTLIHGL-FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 288 AEELLKEMVSKGI 300
A LL +M + I
Sbjct: 244 AFNLLNKMEAAKI 256
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 156/322 (48%), Gaps = 21/322 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
++ +G++P + Y ++ C +V A ++LK MK+ D +V Y NS
Sbjct: 175 IVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPD--VVTY----NSLITR 228
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
++ G ++ +L +M+ + G+ P + + LID G +G L E K +
Sbjct: 229 LFHSGTWGVSARILSDMMRM--GISPDVITFSALIDV-----YGKEGQLLEAKKQY---N 278
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EMI R + P IVTY LI L G A+ ++ + KG + TYNTL++GY K K
Sbjct: 279 EMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAK 338
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYN 237
+D + I M + + TYNT+ G+C+ S A+K+ +M + G+ PD ++N
Sbjct: 339 RVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFN 398
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+L+ G G K R+ D + K+ TY+ +I GL +VE A L +
Sbjct: 399 ILLDGLCDHGKIGKALVRLED-LQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLAL 457
Query: 298 KGICTPDDKKYLILTDMVHRER 319
KG+ +PD Y+ + + R+R
Sbjct: 458 KGV-SPDVITYITMMIGLRRKR 478
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 160/344 (46%), Gaps = 56/344 (16%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P+I + L++ ++ E L + ++ G+ YS + + L
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEML------GISHDLYSFTTLIDCFCRCARL 130
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
A L +M++L G P + + +L++ C ++ +A++ D+++ G
Sbjct: 131 SLALSCLGKMMKL--GFEPSIVTFGSLVNGFC--------HVNRFYEAMSLVDQIVGLGY 180
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG--YAKCKYIDAH 185
EP +V Y +I++L E G+ A D++K M++ G++ DV TYN+L++ ++ + A
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 186 I-------GI--------------------------YDEMVEKRIQPNLLTYNTMMLGHC 212
I GI Y+EM+++ + PN++TYN+++ G C
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 213 ---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTF 269
EA+K+ + + + G P+ ++YN LI GY + V + ++ M ++G+D
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC-KAKRVDDGMKILCVMSRDGVDGDT 359
Query: 270 TTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
TY+ L G + AE++L MVS G+ PD + IL D
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV-HPDMYTFNILLD 402
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 20/235 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ +P I TY +L+ G C H +++AK++L + ++ V Y N Y
Sbjct: 280 MIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNA--VTYNTLINGY--- 334
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K +++ +L M G+ T Y+TL C G + A
Sbjct: 335 -CKAKRVDDGMKILCVM--SRDGVDGDTFTYNTLYQGYCQAG--------KFSAAEKVLG 383
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+S G+ P + T+ +L++ L + G+ A ++++Q+ + + TYN ++ G K
Sbjct: 384 RMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKAD 443
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKM-KTSGIKP 231
++ ++ + K + P+++TY TMM+G R EA +L+ KM K G+ P
Sbjct: 444 KVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 153/317 (48%), Gaps = 22/317 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+LK G P++ ++ L+ G C + +A EL +M + DS V Y ++ +
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS--VTYNILAKGFHLL 305
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
G E D+ L+ GL P + Y L+ C G ID +
Sbjct: 306 GMISGAWEVIRDM------LDKGLSPDVITYTILLCGQCQLG--------NIDMGLVLLK 351
Query: 121 EMISRGIE-PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+M+SRG E +I+ ++++ L + GR A + +M+ GL D+ Y+ ++ G K
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSY 236
D + +YDEM +KRI PN T+ ++LG C+ EA+ L D + +SG D + Y
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
N++I GY+ + G ++EA + +++ GI P+ T+++LI G + +A ++L +
Sbjct: 472 NIVIDGYA-KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 297 SKGICTPDDKKYLILTD 313
G+ P Y L D
Sbjct: 531 LYGL-APSVVSYTTLMD 546
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 149/324 (45%), Gaps = 34/324 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEM-KRASDMSDSGLVRYAYSDNSYNF 59
ML G P + TY L+ G C ++ LLK+M R +++ S
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG----- 372
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ K G ++EA L +M GL P + Y +I C G + D A+
Sbjct: 373 -LCKTGRIDEALSLFNQMKA--DGLSPDLVAYSIVIHGLCKLG--------KFDMALWLY 421
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
DEM + I P T+ L+ L + G A ++ + G LD+ YN ++ GYAK
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSY 236
I+ + ++ ++E I P++ T+N+++ G+C+ +EA+K+ D +K G+ P +SY
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL-------RINHEV---- 285
L+ Y+ G K +R EM GI PT TY + GL NH +
Sbjct: 542 TTLMDAYA-NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Query: 286 -EQAEELLKEMVSKGICTPDDKKY 308
E+ ++ L++M S+GI PD Y
Sbjct: 601 FEKCKQGLRDMESEGI-PPDQITY 623
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 48/253 (18%)
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVG 145
P + +++++ C G +D A ++ ++ G+ P++ ++ +LI L VG
Sbjct: 220 PSVVSFNSIMSGYCKLGF--------VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVG 271
Query: 146 RSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYN 205
A ++ +M + G++ D TYN L G+ I + +M++K + P+++TY
Sbjct: 272 SIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 331
Query: 206 TMMLGHC---------------------------------------RCSEAQKLFDKMKT 226
++ G C R EA LF++MK
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA 391
Query: 227 SGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVE 286
G+ PD ++Y+++I G G + A + DEM I P T+ AL+LGL +
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKF-DMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 450
Query: 287 QAEELLKEMVSKG 299
+A LL ++S G
Sbjct: 451 EARSLLDSLISSG 463
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
TY+ +++ L + A ++ + K + V ++N++MSGY K ++D + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 193 VEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
++ + P++ ++N ++ G C +EA +L M G++PD ++YN+L G+ + G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF-HLLGM 307
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ A+ V +ML G+ P TY L+ G ++ LLK+M+S+G
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 118/263 (44%), Gaps = 20/263 (7%)
Query: 53 SDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEI 112
S SYN V+Y ++ D+ E+ + HT Y T++D C + ++
Sbjct: 158 STQSYNSVLYHFRETDKMWDVYKEIKDKNE----HT--YSTVVDGLCRQ--------QKL 203
Query: 113 DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTL 172
+ AV + + I P++V++ ++ ++G A+ + + GL VY++N L
Sbjct: 204 EDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNIL 263
Query: 173 MSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH---CRCSEAQKLFDKMKTSGI 229
++G I + + +M + ++P+ +TYN + G S A ++ M G+
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 230 KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID-PTFTTYDALILGLRINHEVEQA 288
PD ++Y +L+ G G + + +ML G + + ++ GL +++A
Sbjct: 324 SPDVITYTILLCGQCQLGN-IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 289 EELLKEMVSKGICTPDDKKYLIL 311
L +M + G+ +PD Y I+
Sbjct: 383 LSLFNQMKADGL-SPDLVAYSIV 404
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 26/253 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+++ G P++ T+ +L+ G C + +A+++L +K L A S SY +
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK---------LYGLAPSVVSYTTL 544
Query: 61 M--YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCT--KGIGTKGSLDE--IDK 114
M Y G ++ D L ++ E G+ P + Y + C K L E +K
Sbjct: 545 MDAYANCGNTKSIDELRREMKAE-GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
+M S GI P +TY +I+ L V GA ++ M+ + L TYN L+
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKP 231
YI + E+ + + Y T++ HC + A KLF ++
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL------ 717
Query: 232 DHLSYNLLIAGYS 244
H +N+ I YS
Sbjct: 718 -HRGFNVSIRDYS 729
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKR----ASDMSDS----GLVRYAYSDNS 56
G P++ +Y L+ + EL +EMK ++++ S GL R + +
Sbjct: 533 GLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR-GWKHEN 591
Query: 57 YNFVMYKEGGLEEASDLLPEMLELES-GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKA 115
N V+ +E E+ L +M ES G+ P + Y+T+I C + + A
Sbjct: 592 CNHVL-RERIFEKCKQGLRDM---ESEGIPPDQITYNTIIQYLC--------RVKHLSGA 639
Query: 116 VAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
+ + M SR ++ + TY +LI++L G A+ I +QE+ + L + Y TL+
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR 213
+ + + ++ +++ + ++ Y+ ++ CR
Sbjct: 700 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 153/317 (48%), Gaps = 22/317 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+LK G P++ ++ L+ G C + +A EL +M + DS V Y ++ +
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS--VTYNILAKGFHLL 305
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
G E D+ L+ GL P + Y L+ C G ID +
Sbjct: 306 GMISGAWEVIRDM------LDKGLSPDVITYTILLCGQCQLG--------NIDMGLVLLK 351
Query: 121 EMISRGIE-PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+M+SRG E +I+ ++++ L + GR A + +M+ GL D+ Y+ ++ G K
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSY 236
D + +YDEM +KRI PN T+ ++LG C+ EA+ L D + +SG D + Y
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
N++I GY+ + G ++EA + +++ GI P+ T+++LI G + +A ++L +
Sbjct: 472 NIVIDGYA-KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 297 SKGICTPDDKKYLILTD 313
G+ P Y L D
Sbjct: 531 LYGL-APSVVSYTTLMD 546
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 149/324 (45%), Gaps = 34/324 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEM-KRASDMSDSGLVRYAYSDNSYNF 59
ML G P + TY L+ G C ++ LLK+M R +++ S
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG----- 372
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ K G ++EA L +M GL P + Y +I C G + D A+
Sbjct: 373 -LCKTGRIDEALSLFNQMKA--DGLSPDLVAYSIVIHGLCKLG--------KFDMALWLY 421
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
DEM + I P T+ L+ L + G A ++ + G LD+ YN ++ GYAK
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSY 236
I+ + ++ ++E I P++ T+N+++ G+C+ +EA+K+ D +K G+ P +SY
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL-------RINHEV---- 285
L+ Y+ G K +R EM GI PT TY + GL NH +
Sbjct: 542 TTLMDAYA-NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Query: 286 -EQAEELLKEMVSKGICTPDDKKY 308
E+ ++ L++M S+GI PD Y
Sbjct: 601 FEKCKQGLRDMESEGI-PPDQITY 623
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 48/253 (18%)
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVG 145
P + +++++ C G +D A ++ ++ G+ P++ ++ +LI L VG
Sbjct: 220 PSVVSFNSIMSGYCKLGF--------VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVG 271
Query: 146 RSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYN 205
A ++ +M + G++ D TYN L G+ I + +M++K + P+++TY
Sbjct: 272 SIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 331
Query: 206 TMMLGHC---------------------------------------RCSEAQKLFDKMKT 226
++ G C R EA LF++MK
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA 391
Query: 227 SGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVE 286
G+ PD ++Y+++I G G + A + DEM I P T+ AL+LGL +
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKF-DMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 450
Query: 287 QAEELLKEMVSKG 299
+A LL ++S G
Sbjct: 451 EARSLLDSLISSG 463
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
TY+ +++ L + A ++ + K + V ++N++MSGY K ++D + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 193 VEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
++ + P++ ++N ++ G C +EA +L M G++PD ++YN+L G+ + G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF-HLLGM 307
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ A+ V +ML G+ P TY L+ G ++ LLK+M+S+G
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 118/263 (44%), Gaps = 20/263 (7%)
Query: 53 SDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEI 112
S SYN V+Y ++ D+ E+ + HT Y T++D C + ++
Sbjct: 158 STQSYNSVLYHFRETDKMWDVYKEIKDKNE----HT--YSTVVDGLCRQ--------QKL 203
Query: 113 DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTL 172
+ AV + + I P++V++ ++ ++G A+ + + GL VY++N L
Sbjct: 204 EDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNIL 263
Query: 173 MSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH---CRCSEAQKLFDKMKTSGI 229
++G I + + +M + ++P+ +TYN + G S A ++ M G+
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 230 KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID-PTFTTYDALILGLRINHEVEQA 288
PD ++Y +L+ G G + + +ML G + + ++ GL +++A
Sbjct: 324 SPDVITYTILLCGQCQLGN-IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 289 EELLKEMVSKGICTPDDKKYLIL 311
L +M + G+ +PD Y I+
Sbjct: 383 LSLFNQMKADGL-SPDLVAYSIV 404
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 26/253 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+++ G P++ T+ +L+ G C + +A+++L +K L A S SY +
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK---------LYGLAPSVVSYTTL 544
Query: 61 M--YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCT--KGIGTKGSLDE--IDK 114
M Y G ++ D L ++ E G+ P + Y + C K L E +K
Sbjct: 545 MDAYANCGNTKSIDELRREMKAE-GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
+M S GI P +TY +I+ L V GA ++ M+ + L TYN L+
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKP 231
YI + E+ + + Y T++ HC + A KLF ++
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL------ 717
Query: 232 DHLSYNLLIAGYS 244
H +N+ I YS
Sbjct: 718 -HRGFNVSIRDYS 729
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKR----ASDMSDS----GLVRYAYSDNS 56
G P++ +Y L+ + EL +EMK ++++ S GL R + +
Sbjct: 533 GLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR-GWKHEN 591
Query: 57 YNFVMYKEGGLEEASDLLPEMLELES-GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKA 115
N V+ +E E+ L +M ES G+ P + Y+T+I C + + A
Sbjct: 592 CNHVL-RERIFEKCKQGLRDM---ESEGIPPDQITYNTIIQYLC--------RVKHLSGA 639
Query: 116 VAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
+ + M SR ++ + TY +LI++L G A+ I +QE+ + L + Y TL+
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR 213
+ + + ++ +++ + ++ Y+ ++ CR
Sbjct: 700 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 163/348 (46%), Gaps = 66/348 (18%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSD--------SGLVRYAY------- 52
P TY ++ G C +E AK L + ++ D++ GLVR+
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 53 -----------SDNSYNFVM---YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDEC 98
S SYN +M K G L +A ++ M +G+ P + Y L+
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR--NGVCPDAVTYGCLLHGY 406
Query: 99 CTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQ 158
C+ G ++D A + EM+ P T +L+ +L+++GR AE+++++M
Sbjct: 407 CSVG--------KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 159 EKGLKLDVYTYNTLMSGYAKCKYID----------------------AHIGIYDE-MVEK 195
EKG LD T N ++ G +D ++IG+ D+ ++E
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 196 RIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKE 252
P+L+TY+T++ G C R +EA+ LF +M ++PD ++YN+ I + + G +
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC-KQGKISS 577
Query: 253 AFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
AFRV +M K G + TY++LILGL I +++ + L+ EM KGI
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 141/308 (45%), Gaps = 25/308 (8%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P++ Y L+ C VE L K DM G+ Y+ N + +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYK------DMVLCGIAPQTYTFNLLIRALCDSSCV 163
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
+ A +L EM E G P+ + L+ C G+ DK + + M S G+
Sbjct: 164 DAARELFDEM--PEKGCKPNEFTFGILVRGYCKAGL--------TDKGLELLNAMESFGV 213
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK-CKYIDAHI 186
P V Y ++ + GR+ +E M+++M+E+GL D+ T+N+ +S K K +DA
Sbjct: 214 LPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASR 273
Query: 187 GIYDEMVEKRI---QPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLI 240
D +++ + +PN +TYN M+ G C+ +A+ LF+ ++ + SYN+ +
Sbjct: 274 IFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWL 333
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G G ++ EA V +M GI P+ +Y+ L+ GL + A+ ++ M G+
Sbjct: 334 QGLVRHGKFI-EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 301 CTPDDKKY 308
C PD Y
Sbjct: 393 C-PDAVTY 399
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 147/306 (48%), Gaps = 24/306 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G P T+ LV G C ++ ELL M+ + + + Y+ +F
Sbjct: 173 MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPN----KVIYNTIVSSFC 228
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+EG +++ ++ +M E GLVP + +++ I C +G +D + + D
Sbjct: 229 --REGRNDDSEKMVEKM--REEGLVPDIVTFNSRISALCKEG-------KVLDASRIFSD 277
Query: 121 EMISRGI---EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
+ + P +TY L+++ +VG A+ + + ++E + +YN + G
Sbjct: 278 MELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLV 337
Query: 178 K-CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDH 233
+ K+I+A + +M +K I P++ +YN +M G C+ S+A+ + MK +G+ PD
Sbjct: 338 RHGKFIEAET-VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDA 396
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
++Y L+ GY G V A + EM++N P T + L+ L + +AEELL+
Sbjct: 397 VTYGCLLHGYCSV-GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 455
Query: 294 EMVSKG 299
+M KG
Sbjct: 456 KMNEKG 461
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 150/366 (40%), Gaps = 63/366 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M G P Y +V C + +++++++M+ + GLV + NS
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR------EEGLVPDIVTFNSRISA 261
Query: 61 MYKEGGLEEASDLLPEMLELESGL---VPHTLIYDTLIDECCTKGIGTKG-----SLDEI 112
+ KEG + +AS + +M EL+ L P+++ Y+ ++ C G+ S+ E
Sbjct: 262 LCKEGKVLDASRIFSDM-ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
Query: 113 DKAVAYKD----------------------EMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
D + + +M +GI P+I +Y +L++ L ++G A
Sbjct: 321 DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTM--- 207
+ ++ M+ G+ D TY L+ GY +DA + EM+ PN T N +
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440
Query: 208 MLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVK-----EAFRVR----- 257
+ R SEA++L KM G D ++ N+++ G G K + RV
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500
Query: 258 ------------DEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDD 305
D +++N P TY L+ GL +A+ L EM+ + + PD
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL-QPDS 559
Query: 306 KKYLIL 311
Y I
Sbjct: 560 VAYNIF 565
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 110 DEIDKAVAYKDEMISRGIE--PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVY 167
+ IDKA + SR E P++ Y LL+E+ + R + K+M G+ Y
Sbjct: 89 NHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTY 148
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKM 224
T+N L+ +DA ++DEM EK +PN T+ ++ G+C+ K L + M
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 225 KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHE 284
++ G+ P+ + YN +++ + R G ++ ++ ++M + G+ P T+++ I L +
Sbjct: 209 ESFGVLPNKVIYNTIVSSFC-REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 285 VEQAEELLKEM 295
V A + +M
Sbjct: 268 VLDASRIFSDM 278
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 145/318 (45%), Gaps = 38/318 (11%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMK-----RASDMSDS--GLVRYAYSDNSY 57
G+ T +V G C E+++A E++K M+ ++ +S GLV + +N+
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 58 --NFVMY--------KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKG 107
+ + Y K G EA +L EM+ L P ++ Y+ I C +G
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG--EKLQPDSVAYNIFIHHFCKQG----- 573
Query: 108 SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVY 167
+I A +M +G ++ TY LI L + + ++ EM+EKG+ ++
Sbjct: 574 ---KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFD-K 223
TYNT + + + ++ + DEM++K I PN+ ++ ++ C+ + AQ++F+
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETA 690
Query: 224 MKTSGIKPD--HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRI 281
+ G K L +N L+A G + +A + + +L G + Y L+ L
Sbjct: 691 VSICGQKEGLYSLMFNELLA-----AGQLLKATELLEAVLDRGFELGTFLYKDLVESLCK 745
Query: 282 NHEVEQAEELLKEMVSKG 299
E+E A +L +M+ +G
Sbjct: 746 KDELEVASGILHKMIDRG 763
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 155/304 (50%), Gaps = 22/304 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K G +P + L+ C + V++A ++ ++M+ + +RY ++ Y +
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPN----LRY-FTSLLYGWC 247
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+EG L EA ++L +M E +GL P +++ L+ G G + + A +
Sbjct: 248 --REGKLMEAKEVLVQMKE--AGLEPDIVVFTNLLS-----GYAHAGKMAD---AYDLMN 295
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWG-AEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+M RG EP + YT+LI+AL + A + EM+ G + D+ TY L+SG+ K
Sbjct: 296 DMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKW 355
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSY 236
ID + D+M +K + P+ +TY +M+ H + E +L +KMK G PD L Y
Sbjct: 356 GMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIY 415
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
N++I + + G VKEA R+ +EM NG+ P T+ +I G + +A KEMV
Sbjct: 416 NVVIR-LACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474
Query: 297 SKGI 300
S+GI
Sbjct: 475 SRGI 478
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 107 GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDV 166
S + + KAV DEM G+EP + L++AL + G A + ++M+EK ++
Sbjct: 178 ASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNL 236
Query: 167 YTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDK 223
+ +L+ G+ + + + +M E ++P+++ + ++ G+ + ++A L +
Sbjct: 237 RYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMND 296
Query: 224 MKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINH 283
M+ G +P+ Y +LI + EA RV EM + G + TY ALI G
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 284 EVEQAEELLKEMVSKGICTPDDKKYL 309
+++ +L +M KG+ P Y+
Sbjct: 357 MIDKGYSVLDDMRKKGV-MPSQVTYM 381
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 131/314 (41%), Gaps = 45/314 (14%)
Query: 1 MLKVGFDPTITTYKALVLGCC-THHEVEQAKELLKEMKRASDMSD--------SGLVRYA 51
M K GF+P + Y L+ C T +++A + EM+R +D SG ++
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 52 YSDNSYNFV--MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSL 109
D Y+ + M K+G ++P + +V H +EC L
Sbjct: 357 MIDKGYSVLDDMRKKG-------VMPSQVTYMQIMVAHE--KKEQFEEC----------L 397
Query: 110 DEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTY 169
+ I+K M RG P ++ Y ++I ++G A + EM+ GL V T+
Sbjct: 398 ELIEK-------MKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTF 450
Query: 170 NTLMSGYAKCKYIDAHIGIYDEMVEKRI--QPNLLTYNTMMLGHCRCSEAQKLFD----- 222
+++G+ ++ + EMV + I P T +++ R + + D
Sbjct: 451 VIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCI 510
Query: 223 KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRIN 282
KTS + + ++ + I Y G+VKEA +M++ + P TY L+ GL
Sbjct: 511 SNKTSSCELNVSAWTIWIHAL-YAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKL 569
Query: 283 HEVEQAEELLKEMV 296
+ A E+ +++V
Sbjct: 570 YNRTIAAEITEKVV 583
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 100/238 (42%), Gaps = 61/238 (25%)
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKL-DVYTYNTLMSGYAKCKYIDAHIGIYDE 191
+ +++ + + G WG +I+EM++ +L + + LM +A + + + DE
Sbjct: 136 SMVMILSKMRQFGAVWG---LIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDE 192
Query: 192 MVEK----------------------------------RIQPNLLTYNTMMLGHCR---C 214
M + + PNL + +++ G CR
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKL 252
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
EA+++ +MK +G++PD + + L++GY++ G + +A+ + ++M K G +P Y
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH-AGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 275 LILGL-RINHEVEQAEELLKEMVSKGICTPD-----------------DKKYLILTDM 314
LI L R +++A + EM G C D DK Y +L DM
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYG-CEADIVTYTALISGFCKWGMIDKGYSVLDDM 368
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 146/303 (48%), Gaps = 24/303 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G P + T+ L+ G C V QA L+ M + G Y N
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRM------VEEGHQPYGTIING---- 50
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K G E A +LL +M E + + H +IY+ +ID C G A
Sbjct: 51 LCKMGDTESALNLLSKMEE--THIKAHVVIYNAIIDRLCKDGHHIH--------AQNLFT 100
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM +GI P ++TY+ +I++ GR AE ++++M E+ + DV T++ L++ K
Sbjct: 101 EMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEG 160
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ IY +M+ + I P +TYN+M+ G C R ++A+++ D M + PD ++++
Sbjct: 161 KVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFS 220
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI GY + V + EM + GI TY LI G +++ A++LL M+S
Sbjct: 221 TLINGYC-KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMIS 279
Query: 298 KGI 300
G+
Sbjct: 280 SGV 282
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 117/228 (51%), Gaps = 17/228 (7%)
Query: 80 LESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIE 139
+E+G P + + TL++ C +G + +A+A D M+ G +P Y +I
Sbjct: 2 VETGCRPDVVTFTTLMNGLCCEG--------RVLQALALVDRMVEEGHQP----YGTIIN 49
Query: 140 ALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQP 199
L ++G + A +++ +M+E +K V YN ++ K + ++ EM +K I P
Sbjct: 50 GLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFP 109
Query: 200 NLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRV 256
+++TY+ M+ CR ++A++L M I PD ++++ LI + G V EA +
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL-VKEGKVSEAEEI 168
Query: 257 RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
+ML+ GI PT TY+++I G + A+ +L M SK C+PD
Sbjct: 169 YGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS-CSPD 215
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ G PT TY +++ G C + AK +L M AS +V ++ N Y
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSM--ASKSCSPDVVTFSTLINGYCKA 229
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G+E + EM G+V +T+ Y TLI C G ++D A +
Sbjct: 230 KRVDNGME----IFCEM--HRRGIVANTVTYTTLIHGFCQVG--------DLDAAQDLLN 275
Query: 121 EMISRGIEPTIVTYTLLIEAL 141
MIS G+ P +T+ ++ +L
Sbjct: 276 VMISSGVAPNYITFQSMLASL 296
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 154/304 (50%), Gaps = 21/304 (6%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P TY L+ G C +++A LL EM+ + S S ++ D + K+G L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQ-SEGCSPSPVIYNVLIDG-----LCKKGDL 273
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
+ L+ M G VP+ + Y+TLI C KG ++DKAV+ + M+S
Sbjct: 274 TRVTKLVDNMFL--KGCVPNEVTYNTLIHGLCLKG--------KLDKAVSLLERMVSSKC 323
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
P VTY LI L + R+ A ++ M+E+G L+ + Y+ L+SG K + +
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMS 383
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
++ +M EK +PN++ Y+ ++ G CR +EA+++ ++M SG P+ +Y+ L+ G+
Sbjct: 384 LWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF- 442
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
++ G +EA +V EM K G Y LI GL V++A + +M++ GI PD
Sbjct: 443 FKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI-KPD 501
Query: 305 DKKY 308
Y
Sbjct: 502 TVAY 505
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 150/334 (44%), Gaps = 47/334 (14%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSD--------SGLVR--- 49
M G P TY L+ G C ++++A LL+ M + + + +GLV+
Sbjct: 283 MFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342
Query: 50 ---------------YAYSDNSYNFV---MYKEGGLEEASDLLPEMLELESGLVPHTLIY 91
Y + + Y+ + ++KEG EEA L +M E G P+ ++Y
Sbjct: 343 ATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE--KGCKPNIVVY 400
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
L+D C +G + ++A + MI+ G P TY+ L++ F+ G A
Sbjct: 401 SVLVDGLCREG--------KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
+ KEM + G + + Y+ L+ G + + ++ +M+ I+P+ + Y++++ G
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Query: 212 C---RCSEAQKLFDKM---KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGI 265
C A KL+ +M + +PD ++YN+L+ G + + A + + ML G
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKD-ISRAVDLLNSMLDRGC 571
Query: 266 DPTFTTYDALILGL-RINHEVEQAEELLKEMVSK 298
DP T + + L ++ ++ L+E+V +
Sbjct: 572 DPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKM 224
++N ++ K +++D I ++ M E++ P+ TY T+M G C R EA L D+M
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 225 KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHE 284
++ G P + YN+LI G +G + ++ D M G P TY+ LI GL + +
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTR-VTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 285 VEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
+++A LL+ MVS C P+D Y L + + ++R
Sbjct: 308 LDKAVSLLERMVSSK-CIPNDVTYGTLINGLVKQR 341
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 4/177 (2%)
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH 185
I P +++ L+I+AL ++ A ++ + M E+ D YTY TLM G K + ID
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 186 IGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAG 242
+ + DEM + P+ + YN ++ G C+ + KL D M G P+ ++YN LI G
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 243 YSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+G + +A + + M+ + P TY LI GL A LL M +G
Sbjct: 302 LCLKGK-LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 121/277 (43%), Gaps = 19/277 (6%)
Query: 49 RYAYSDNSYNFVMYKEG----GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIG 104
R S NS V+ EG GLE ++ + + + P+ L ++ +I C
Sbjct: 146 RSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNM--NISPNGLSFNLVIKALC----- 198
Query: 105 TKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKL 164
L +D+A+ M R P TY L++ L + R A ++ EMQ +G
Sbjct: 199 ---KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255
Query: 165 DVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLF 221
YN L+ G K + + D M K PN +TYNT++ G C + +A L
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 222 DKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRI 281
++M +S P+ ++Y LI G + +A R+ M + G Y LI GL
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGL-VKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 374
Query: 282 NHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
+ E+A L ++M KG C P+ Y +L D + RE
Sbjct: 375 EGKAEEAMSLWRKMAEKG-CKPNIVVYSVLVDGLCRE 410
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 158/332 (47%), Gaps = 43/332 (12%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKR-------------------ASD 41
M+K G++P + Y L+ G C + E+ A ELL EM++ +
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 42 MSDSG-----LVRYAYSDNSYNF-----VMYKEGGLEEASDLLPEMLELESGLVPHTLIY 91
SD+ +++ + + + F V K+G L+EA +L EM++ S + P+ + Y
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ--SSVDPNNVTY 284
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
+++I+ C G + A D M S+G P +VTY LI +
Sbjct: 285 NSIINGLCMHG--------RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
+ + M +G D++TYNTL+ GY + + + I+ MV +R+ P+++T+ ++ G
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Query: 212 CRCSEAQKL---FDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
C E + FD M+ S ++YN++I G + V++A+ + + G+ P
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC-KADKVEKAWELFCRLPVEGVKPD 455
Query: 269 FTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
TY +ILGL N +A+EL++ M +GI
Sbjct: 456 ARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 148/314 (47%), Gaps = 56/314 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K+G++P+I T+ +L+ G C + + A L+
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV--------------------------- 164
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+L ++SG P+ ++Y+TLID C G E++ A+ +
Sbjct: 165 ----------------ILMVKSGYEPNVVVYNTLIDGLCKNG--------ELNIALELLN 200
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM +G+ +VTY L+ L GR A M+++M ++ + DV T+ L+ + K
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+D +Y EM++ + PN +TYN+++ G C R +A+K FD M + G P+ ++YN
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYN 320
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI+G+ + V E ++ M G + TY+ LI G ++ A ++ MVS
Sbjct: 321 TLISGFC-KFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 298 KGICTPDDKKYLIL 311
+ + TPD + IL
Sbjct: 380 RRV-TPDIITHCIL 392
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 107/197 (54%), Gaps = 5/197 (2%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A++ +M+ G EP+IVT+ L+ V R A ++ M + G + +V YNTL+
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKP 231
G K ++ + + +EM +K + +++TYNT++ G C R S+A ++ M I P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
D +++ LI + +G + EA + EM+++ +DP TY+++I GL ++ + A++
Sbjct: 245 DVVTFTALIDVFVKQGN-LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303
Query: 292 LKEMVSKGICTPDDKKY 308
M SKG C P+ Y
Sbjct: 304 FDLMASKG-CFPNVVTY 319
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 119/245 (48%), Gaps = 15/245 (6%)
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
E+A L EM+ H+ +++D T+ + +L + + + +M G
Sbjct: 52 FEDAFALFFEMV--------HSQPLPSIVDF--TRLLTATANLRRYETVIYFSQKMELYG 101
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
I + ++T+LI R A ++ +M + G + + T+ +L+ G+ I
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ MV+ +PN++ YNT++ G C+ E A +L ++M+ G+ D ++YN L+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
Y G + A +RD M+K I+P T+ ALI +++A+EL KEM+ + P
Sbjct: 222 CYSGRWSDAARMLRD-MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV-DP 279
Query: 304 DDKKY 308
++ Y
Sbjct: 280 NNVTY 284
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
+ A A EM+ P+IV +T L+ A + R ++M+ G+ D+Y++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
L+ + +C + + + +M++ +P+++T+ +++ G C R +A L M S
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
G +P+ + YN LI G + G + A + +EM K G+ TY+ L+ GL +
Sbjct: 171 GYEPNVVVYNTLIDGLC-KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 288 AEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
A +L++M+ + I PD + L D+ ++
Sbjct: 230 AARMLRDMMKRSI-NPDVVTFTALIDVFVKQ 259
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 149/314 (47%), Gaps = 56/314 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K+G++P I T +L+ G C + A L+ +M
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM------------------------ 179
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+E G P T + TLI G+ E AVA D
Sbjct: 180 -------------------VEMGYKPDTFTFTTLI-----HGLFLHNKASE---AVALVD 212
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+ RG +P +VTY ++ L + G A ++K+M++ ++ DV YNT++ G K K
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 272
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
++D + ++ EM K I+P++ TY++++ C R S+A +L M I P+ ++++
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI + G V EA ++ DEM+K IDP TY +LI G ++ +++A+ + + M+S
Sbjct: 333 ALIDAFVKEGKLV-EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 391
Query: 298 KGICTPDDKKYLIL 311
K C P+ Y L
Sbjct: 392 KD-CFPNVVTYSTL 404
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 162/356 (45%), Gaps = 58/356 (16%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSD--------SGLVRYAY 52
M++ G P + TY +V G C +++ A LLK+M++ +D GL +Y +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 53 SDNSYNFV---------------------MYKEGGLEEASDLLPEMLEL----------- 80
D++ N + G +AS LL +M+E
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 81 -------ESGLVPHTLIYDTLIDECCTKGIGTKGSL-------DEIDKAVAYKDEMISRG 126
E LV +YD +I I T SL D +D+A + MIS+
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
P +VTY+ LI+ + R ++ +EM ++GL + TY TL+ G+ + + D
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
++ +MV + PN+LTYN ++ G C+ ++A +F+ ++ S ++PD +YN++I G
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ G V++ + + + G+ P Y+ +I G E+A+ LLK+M G
Sbjct: 514 C-KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 147/322 (45%), Gaps = 56/322 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K DP I TY +L+ G C H +++AK + + M S +V Y+ +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTYSTLIKGF--- 408
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K +EE +L EM + GLV +T+ Y TLI G + D + + +K
Sbjct: 409 -CKAKRVEEGMELFREMSQ--RGLVGNTVTYTTLIH-------GFFQARDCDNAQMVFK- 457
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+S G+ P I+TY +L++ L + G+ A + + +Q ++ D+YTYN ++ G K
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
++ ++ + K + PN++ YNTM+ G CR EA L KMK G P+ +YN
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI R+RD + E + EL+KEM S
Sbjct: 578 TLIRA------------RLRD------------------------GDREASAELIKEMRS 601
Query: 298 KGICTPDDKKYLILTDMVHRER 319
G D ++T+M+H R
Sbjct: 602 CGF-AGDASTIGLVTNMLHDGR 622
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 15/241 (6%)
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
+++A DL +M++ S P + ++ L+ +++ + ++ ++M + G
Sbjct: 64 VDDAVDLFGDMVK--SRPFPSIVEFNKLLSAV--------AKMNKFELVISLGEQMQTLG 113
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
I + TY++ I + A ++ +M + G + D+ T ++L++GY K I +
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ D+MVE +P+ T+ T++ G H + SEA L D+M G +PD ++Y ++ G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
RG + A + +M K I+ Y+ +I GL ++ A L EM +KGI P
Sbjct: 234 CKRGD-IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI-RP 291
Query: 304 D 304
D
Sbjct: 292 D 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
++D AV +M+ P+IV + L+ A+ ++ + + ++MQ G+ D+YTY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
++ + + + + + +M++ +P+++T ++++ G+C R S+A L D+M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
G KPD ++ LI G + EA + D+M++ G P TY ++ GL +++
Sbjct: 183 GYKPDTFTFTTLIHGL-FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 288 AEELLKEM 295
A LLK+M
Sbjct: 242 ALSLLKKM 249
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 161/317 (50%), Gaps = 21/317 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF P + Y ++ G C + ++ A E+ M++ +D A + N+ +
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD------AVTYNTLISGLSNS 232
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G +A+ LL +M++ + + P+ + + LID +G + ++ YK EMI
Sbjct: 233 GRWTDAARLLRDMVKRK--IDPNVIFFTALIDTFVKEG-------NLLEARNLYK-EMIR 282
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
R + P + TY LI G A+ M M KG DV TYNTL++G+ K K ++
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIA 241
+ ++ EM + + + TYNT++ G+C+ + AQK+F++M G+ PD ++YN+L+
Sbjct: 343 GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
G +++A + +++ K+ +D TY+ +I GL ++++A L + + KG+
Sbjct: 403 CLC-NNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV- 460
Query: 302 TPDDKKYLILTDMVHRE 318
PD Y+ + + R+
Sbjct: 461 KPDAIAYITMISGLCRK 477
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 19/240 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ P + TY +L+ G C H + AK + M D +V Y N+
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD--VVTY----NTLITG 333
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K +E+ L EM GLV Y+TLI C G +++ A +
Sbjct: 334 FCKSKRVEDGMKLFCEMTY--QGLVGDAFTYNTLIHGYCQAG--------KLNVAQKVFN 383
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+ G+ P IVTY +L++ L G+ A M++++Q+ + +D+ TYN ++ G +
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
+ ++ + K ++P+ + Y TM+ G CR EA KL +MK G P Y+
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 113/237 (47%), Gaps = 14/237 (5%)
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
++A L EML+ S +P + + T+ + +++ D + +M + G
Sbjct: 60 FDDAFSLFCEMLQ--SRPIPSIVDF--------TRVLTVIAKMNKFDIVIYLYHKMENLG 109
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
I + ++T+LI R A ++ +M + G + + T +L++G+ + +
Sbjct: 110 ISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAV 169
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ D M PN++ YNT++ G C+ + A ++F M+ GI+ D ++YN LI+G
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
S G + A +RD M+K IDP + ALI + +A L KEM+ + +
Sbjct: 230 SNSGRWTDAARLLRD-MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+ G P+IVT L+ + R A ++ M G +V YNT+++G K +
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYN 237
++ + ++ M +K I+ + +TYNT++ G R ++A +L M I P+ + +
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI + G + EA + EM++ + P TY++LI G I+ + A+ + MVS
Sbjct: 259 ALIDTFVKEGNLL-EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 298 KGICTPDDKKY 308
KG C PD Y
Sbjct: 318 KG-CFPDVVTY 327
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 158/316 (50%), Gaps = 21/316 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P + TY +V G C +++ A LLK+M++ + G+V Y N+
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK--IEPGVVIY----NTIIDA 265
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ + +A +L EM G+ P+ + Y++LI C G + S
Sbjct: 266 LCNYKNVNDALNLFTEMDN--KGIRPNVVTYNSLIRCLCNYGRWSDAS--------RLLS 315
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+MI R I P +VT++ LI+A + G+ AE + EM ++ + D++TY++L++G+
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+D +++ M+ K PN++TYNT++ G C R E +LF +M G+ + ++Y
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G+ ++ A V +M+ +G+ P TY L+ GL N +VE A + E +
Sbjct: 436 TLIHGF-FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF-EYLQ 493
Query: 298 KGICTPDDKKYLILTD 313
+ PD Y I+ +
Sbjct: 494 RSKMEPDIYTYNIMIE 509
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 147/311 (47%), Gaps = 56/311 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K+G++P I T +L+ G C + + A L+ +M
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM------------------------ 177
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+E G P + ++TLI G+ E AVA D
Sbjct: 178 -------------------VEMGYQPDSFTFNTLI-----HGLFRHNRASE---AVALVD 210
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+ +G +P +VTY +++ L + G A ++K+M++ ++ V YNT++ K
Sbjct: 211 RMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK 270
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
++ + ++ EM K I+PN++TYN+++ C R S+A +L M I P+ ++++
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI + G V EA ++ DEM+K IDP TY +LI G ++ +++A+ + + M+S
Sbjct: 331 ALIDAFVKEGKLV-EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 298 KGICTPDDKKY 308
K C P+ Y
Sbjct: 390 KD-CFPNVVTY 399
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 145/307 (47%), Gaps = 21/307 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + TY +L+ C + A LL SDM + + + ++ KE
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLL------SDMIERKINPNVVTFSALIDAFVKE 339
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G L EA L EM++ + P Y +LI+ C D +D+A + MIS
Sbjct: 340 GKLVEAEKLYDEMIK--RSIDPDIFTYSSLINGFCMH--------DRLDEAKHMFELMIS 389
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+ P +VTY LI+ + R ++ +EM ++GL + TY TL+ G+ + + D
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
++ +MV + P+++TY+ ++ G C + A +F+ ++ S ++PD +YN++I
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
G + G V++ + + + G+ P TY ++ G E+A+ L +EM +G
Sbjct: 510 GMC-KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP- 567
Query: 302 TPDDKKY 308
PD Y
Sbjct: 568 LPDSGTY 574
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 19/261 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K DP I TY +L+ G C H +++AK + + M S +V Y N+
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTY----NTLIKG 405
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K ++E +L EM + GLV +T+ Y TLI E D A
Sbjct: 406 FCKAKRVDEGMELFREMSQ--RGLVGNTVTYTTLIHGFFQA--------RECDNAQIVFK 455
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+S G+ P I+TY++L++ L G+ A + + +Q ++ D+YTYN ++ G K
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
++ ++ + K ++PN++TY TMM G CR EA LF +MK G PD +YN
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 238 LLIAGYSYRGGYVKEAFRVRD 258
LI + G A +R+
Sbjct: 576 TLIRAHLRDGDKAASAELIRE 596
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 21/322 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ +P + T+ AL+ ++ +A++L EM + S D + YS F
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI----FTYSSLINGFC 372
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
M+ L+EA + M+ + P+ + Y+TLI C +D+ +
Sbjct: 373 MHDR--LDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKA--------KRVDEGMELFR 420
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM RG+ VTYT LI F+ A+ + K+M G+ D+ TY+ L+ G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYN 237
++ + +++ + +++P++ TYN M+ G C+ + + LF + G+KP+ ++Y
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+++G+ R G +EA + EM + G P TY+ LI + + + EL++EM S
Sbjct: 541 TMMSGFC-RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Query: 298 KGICTPDDKKYLILTDMVHRER 319
D ++T+M+H R
Sbjct: 600 CRF-VGDASTIGLVTNMLHDGR 620
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 16/256 (6%)
Query: 48 VRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKG 107
VRY Y S N + + L++A +L +M++ S P + + L+
Sbjct: 45 VRYDYRKISINRL--NDLKLDDAVNLFGDMVK--SRPFPSIVEFSKLLSAI--------A 92
Query: 108 SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVY 167
+++ D ++ ++M + GI + TY++LI + A ++ +M + G + D+
Sbjct: 93 KMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIV 152
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKM 224
T N+L++G+ I + + +MVE QP+ T+NT++ G H R SEA L D+M
Sbjct: 153 TLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Query: 225 KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHE 284
G +PD ++Y +++ G RG + A + +M + I+P Y+ +I L
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRGD-IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 285 VEQAEELLKEMVSKGI 300
V A L EM +KGI
Sbjct: 272 VNDALNLFTEMDNKGI 287
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 151/321 (47%), Gaps = 22/321 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHH-EVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNF 59
M + G P + TY A++ C E +Q + EM+R D R + NS
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPD----RITF--NSLLA 347
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
V + G E A +L EM + Y+TL+D C G ++D A
Sbjct: 348 VCSRGGLWEAARNLFDEMTNRR--IEQDVFSYNTLLDAICKGG--------QMDLAFEIL 397
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+M + I P +V+Y+ +I+ + GR A ++ EM+ G+ LD +YNTL+S Y K
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKV 457
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSY 236
+ + I EM I+ +++TYN ++ G+ + E +K+F +MK + P+ L+Y
Sbjct: 458 GRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTY 517
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
+ LI GYS +GG KEA + E G+ Y ALI L N V A L+ EM
Sbjct: 518 STLIDGYS-KGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 297 SKGICTPDDKKYLILTDMVHR 317
+GI +P+ Y + D R
Sbjct: 577 KEGI-SPNVVTYNSIIDAFGR 596
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 131/271 (48%), Gaps = 19/271 (7%)
Query: 51 AYSDNSYNFVM----YKEGGL-EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGT 105
Y + Y F Y GL EEA + M E GL P+ + Y+ +ID C G+
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY--GLRPNLVTYNAVIDACGKGGM-- 318
Query: 106 KGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLD 165
E + + DEM G++P +T+ L+ G A ++ EM + ++ D
Sbjct: 319 -----EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQD 373
Query: 166 VYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFD 222
V++YNTL+ K +D I +M KRI PN+++Y+T++ G R EA LF
Sbjct: 374 VFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 223 KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRIN 282
+M+ GI D +SYN L++ Y+ + G +EA + EM GI TY+AL+ G
Sbjct: 434 EMRYLGIALDRVSYNTLLSIYT-KVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 283 HEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+ ++ +++ EM + + P+ Y L D
Sbjct: 493 GKYDEVKKVFTEMKREHVL-PNLLTYSTLID 522
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 8/221 (3%)
Query: 99 CTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVT--YTLLIEALFEVGRSWGAEDMIKE 156
CT I G+ +E DKAV + + + R + +I L G+ A+ + +
Sbjct: 199 CTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFET 258
Query: 157 MQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM----LGHC 212
G VY ++ L+S Y + + I +++ M E ++PNL+TYN ++ G
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM 318
Query: 213 RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTY 272
+ K FD+M+ +G++PD +++N L+A S RGG + A + DEM I+ +Y
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS-RGGLWEAARNLFDEMTNRRIEQDVFSY 377
Query: 273 DALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+ L+ + +++ A E+L +M K I P+ Y + D
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIM-PNVVSYSTVID 417
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 157/309 (50%), Gaps = 22/309 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+VG + + TY AL+ G C +++A+EL +M A G++ S N+
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA------GVIPNLASYNALIHG 481
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K ++ A +LL E+ G+ P L+Y T I C SL++I+ A +
Sbjct: 482 FVKAKNMDRALELLNELKG--RGIKPDLLLYGTFIWGLC--------SLEKIEAAKVVMN 531
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM GI+ + YT L++A F+ G ++ EM+E +++ V T+ L+ G K K
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 181 YIDAHIGIYDEMVEKR-IQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSY 236
+ + ++ + +Q N + M+ G C+ ++ A LF++M G+ PD +Y
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 651
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
L+ G +++ G V EA +RD+M + G+ Y +L+ GL +++++A L+EM+
Sbjct: 652 TSLMDG-NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI 710
Query: 297 SKGICTPDD 305
+GI PD+
Sbjct: 711 GEGI-HPDE 718
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 157/346 (45%), Gaps = 57/346 (16%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGG 66
+P + TY AL+ C ++ E +EMK +GL S ++ KEG
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMK------GNGLKPNVVSYSTLVDAFCKEGM 382
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
+++A +M + GLVP+ Y +LID C G + A +EM+ G
Sbjct: 383 MQQAIKFYVDMRRV--GLVPNEYTYTSLIDANCKIG--------NLSDAFRLGNEMLQVG 432
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
+E +VTYT LI+ L + R AE++ +M G+ ++ +YN L+ G+ K K +D +
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ +E+ + I+P+LL Y T + G C + A+ + ++MK GIK + L Y L+ Y
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI----------------------LGLRI 281
++ G E + DEM + I+ T T+ LI GL+
Sbjct: 553 -FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 611
Query: 282 N--------------HEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
N ++VE A L ++MV KG+ PD Y L D
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL-VPDRTAYTSLMD 656
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 145/303 (47%), Gaps = 20/303 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G PT+ TY ++ C +VE A+ L +EMK GLV + NS
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF------RGLVPDTVTYNSMIDG 306
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G L++ EM ++ P + Y+ LI+ C G ++ + +
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCE--PDVITYNALINCFCKFG--------KLPIGLEFYR 356
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM G++P +V+Y+ L++A + G A +M+ GL + YTY +L+ K
Sbjct: 357 EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ + +EM++ ++ N++TY ++ G C R EA++LF KM T+G+ P+ SYN
Sbjct: 417 NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 476
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G+ + + A + +E+ GI P Y I GL ++E A+ ++ EM
Sbjct: 477 ALIHGF-VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 535
Query: 298 KGI 300
GI
Sbjct: 536 CGI 538
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 127/278 (45%), Gaps = 47/278 (16%)
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
V+ G LEEA +M + P T C + L + D +
Sbjct: 201 VLIDLGMLEEAIQCFSKMKRFR--VFPKT--------RSCNGLLHRFAKLGKTDDVKRFF 250
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+MI G PT+ TY ++I+ + + G A + +EM+ +GL D TYN+++ G+ K
Sbjct: 251 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV 310
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSY 236
+D + ++EM + +P+++TYN ++ C+ + + + +MK +G+KP+ +SY
Sbjct: 311 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 370
Query: 237 NLLIAGYSYRG----------------------------------GYVKEAFRVRDEMLK 262
+ L+ + G G + +AFR+ +EML+
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G++ TY ALI GL +++AEEL +M + G+
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + Y + G C+ ++E AK ++ EMK ++S + Y ++Y +K
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS--LIYTTLMDAY----FKS 555
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G E LL EM EL+ + T + LID C + + KAV Y + + +
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVT--FCVLIDGLCKNKL--------VSKAVDYFNRISN 605
Query: 125 R-GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
G++ +T +I+ L + + A + ++M +KGL D Y +LM G K +
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLI 240
+ + D+M E ++ +LL Y +++ G C++ QK ++M GI PD + + +
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV-LCISV 724
Query: 241 AGYSYRGGYVKEAFRVRDEMLKN 263
Y G + EA ++ ++K+
Sbjct: 725 LKKHYELGCIDEAVELQSYLMKH 747
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 14/255 (5%)
Query: 69 EASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEI-------DKAVAYKDE 121
+A+ +L EM+ ++ +++ T C G G +L + ++A+ +
Sbjct: 160 DANSVLKEMVLSKADCDVFDVLWST--RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSK 217
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M + P + L+ ++G++ + K+M G + V+TYN ++ K
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGH---CRCSEAQKLFDKMKTSGIKPDHLSYNL 238
++A G+++EM + + P+ +TYN+M+ G R + F++MK +PD ++YN
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
LI + + G + EM NG+ P +Y L+ ++QA + +M
Sbjct: 338 LINCFC-KFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 396
Query: 299 GICTPDDKKYLILTD 313
G+ P++ Y L D
Sbjct: 397 GL-VPNEYTYTSLID 410
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 160/322 (49%), Gaps = 24/322 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M ++GF P + Y ++ G C V A EL M+R +D A + NS
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD------AVTYNSLVAG 218
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G +A+ L+ +M+ + +VP+ + + +ID +G + +A+ +
Sbjct: 219 LCCSGRWSDAARLMRDMVMRD--IVPNVITFTAVIDVFVKEG--------KFSEAMKLYE 268
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM R ++P + TY LI L GR A+ M+ M KG DV TYNTL++G+ K K
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+D ++ EM ++ + + +TYNT++ G+ R AQ++F +M + +P+ +Y+
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYS 385
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+L+ G V++A + + M K+ I+ TTY+ +I G+ VE A +L + +
Sbjct: 386 ILLYGLCM-NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 298 KGICTPDDKKYLILTDMVHRER 319
KG+ PD Y + R+R
Sbjct: 445 KGL-KPDVVSYTTMISGFCRKR 465
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 29/301 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K G++P + T +L+ G C + V A +L+ +M+ D + YN +
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVI---------YNTI 180
Query: 61 M---YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ K G + +A +L M G+ + Y++L+ C G + D A
Sbjct: 181 IDGSCKIGLVNDAVELFDRM--ERDGVRADAVTYNSLVAGLCCSGRWS-------DAARL 231
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
+D M+ R I P ++T+T +I+ + G+ A + +EM + + DV+TYN+L++G
Sbjct: 232 MRD-MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHL 234
+D + D MV K P+++TYNT++ G C R E KLF +M G+ D +
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
+YN +I GY ++ G A + M P TY L+ GL +N VE+A L +
Sbjct: 351 TYNTIIQGY-FQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 295 M 295
M
Sbjct: 407 M 407
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 114/202 (56%), Gaps = 5/202 (2%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A++ +M+ G EP +VT + LI + R + A D++ +M+E G + DV YNT++
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKP 231
G K ++ + ++D M ++ + +TYN+++ G C R S+A +L M I P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
+ +++ +I + G + EA ++ +EM + +DP TY++LI GL ++ V++A+++
Sbjct: 243 NVITFTAVIDVFVKEGKF-SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 292 LKEMVSKGICTPDDKKYLILTD 313
L MV+KG C PD Y L +
Sbjct: 302 LDLMVTKG-CLPDVVTYNTLIN 322
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + DP + TY +L+ G C H V++AK++L M + D +V Y N +
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD--VVTYNTLINGF--- 324
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLD---------- 110
K ++E + L EM + GLV T+ Y+T+I +G G D
Sbjct: 325 -CKSKRVDEGTKLFREMAQ--RGLVGDTITYNTII-----QGYFQAGRPDAAQEIFSRMD 376
Query: 111 -------------------EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
++KA+ + M IE I TY ++I + ++G A
Sbjct: 377 SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQP 199
D+ + + KGLK DV +Y T++SG+ + + D +Y +M E + P
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 154/349 (44%), Gaps = 60/349 (17%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM--- 61
G P + Y AL+ C + +A+ L M G + +D +Y+ ++
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRM---------GKIGLRPNDVTYSILIDMF 412
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
+ G L+ A L EM++ +GL Y++LI+ C G +I A + E
Sbjct: 413 CRRGKLDTALSFLGEMVD--TGLKLSVYPYNSLINGHCKFG--------DISAAEGFMAE 462
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
MI++ +EPT+VTYT L+ G+ A + EM KG+ +YT+ TL+SG +
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFD---KMKTSGIKPDHLSYNL 238
I + +++EM E ++PN +TYN M+ G+C + K F+ +M GI PD SY
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 239 LIAGYSYRG----------------------------------GYVKEAFRVRDEMLKNG 264
LI G G G ++EA V EM++ G
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 265 IDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+D Y LI G + + + LLKEM +G+ PDD Y + D
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL-KPDDVIYTSMID 690
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 170/402 (42%), Gaps = 98/402 (24%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRA-------------SDMSDSGL 47
M+ +PT+ TY +L+ G C+ ++ +A L EM S + +GL
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 48 VRYAY-------------SDNSYNFVM---YKEGGLEEASDLLPEMLELESGLVPHTLIY 91
+R A + +YN ++ +EG + +A + L EM E G+VP T Y
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE--KGIVPDTYSY 580
Query: 92 DTLIDECCTKGIGT----------KGS--LDEI---------------DKAVAYKDEMIS 124
LI C G + KG+ L+EI ++A++ EM+
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
RG++ +V Y +LI+ + ++KEM ++GLK D Y +++ +K
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSY----- 236
GI+D M+ + PN +TY ++ G C+ +EA+ L KM+ P+ ++Y
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 237 ------------------------------NLLIAGYSYRGGYVKEAFRVRDEMLKNGID 266
N+LI G+ R G ++EA + M+ +G+
Sbjct: 761 ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFC-RQGRIEEASELITRMIGDGVS 819
Query: 267 PTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
P TY +I L ++V++A EL M KGI PD Y
Sbjct: 820 PDCITYTTMINELCRRNDVKKAIELWNSMTEKGI-RPDRVAY 860
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 5/202 (2%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
++M+S GI P + YT +I +L E+ A++MI M+ G +++ YN L+ G K
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQ---KLFDKMKTSGIKPDHLSY 236
+ + +GI ++ K ++P+++TY T++ G C+ E + ++ D+M P +
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
+ L+ G RG ++EA + ++ G+ P Y+ALI L + +AE L M
Sbjct: 336 SSLVEGLRKRGK-IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 297 SKGICTPDDKKYLILTDMVHRE 318
G+ P+D Y IL DM R
Sbjct: 395 KIGL-RPNDVTYSILIDMFCRR 415
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 148/346 (42%), Gaps = 56/346 (16%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M G D I Y L+ G C +V +A + K++ D Y Y
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV----VTYCTLVYGLC 308
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+E E +++ EML L P +L++ G+ +G ++E A+
Sbjct: 309 KVQE--FEIGLEMMDEMLCLR--FSPSEAAVSSLVE-----GLRKRGKIEE---ALNLVK 356
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
++ G+ P + Y LI++L + + AE + M + GL+ + TY+ L+ + +
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR--------------------------- 213
+D + EMV+ ++ ++ YN+++ GHC+
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 214 ------CS-----EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK 262
CS +A +L+ +M GI P ++ L++G +R G +++A ++ +EM +
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL-FRAGLIRDAVKLFNEMAE 535
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
+ P TY+ +I G ++ +A E LKEM KGI PD Y
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI-VPDTYSY 580
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 135/342 (39%), Gaps = 86/342 (25%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G P +Y+ L+ G C + +AK + + + + L Y+ + F
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG----NCELNEICYTGLLHGFC 623
Query: 61 MYKEGGLEEASDLLPEMLEL---------------------------------ESGLVPH 87
+EG LEEA + EM++ + GL P
Sbjct: 624 --REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 88 TLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRS 147
+IY ++ID K + +A D MI+ G P VTYT +I L + G
Sbjct: 682 DVIYTSMID--------AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 148 WGAEDMIKEMQE-----------------------------------KGLKLDVYTYNTL 172
AE + +MQ KGL + TYN L
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNML 793
Query: 173 MSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGI 229
+ G+ + I+ + M+ + P+ +TY TM+ CR ++ +K L++ M GI
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Query: 230 KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTT 271
+PD ++YN LI G G + +A +R+EML+ G+ P T
Sbjct: 854 RPDRVAYNTLIHGCCV-AGEMGKATELRNEMLRQGLIPNNKT 894
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 51/280 (18%)
Query: 57 YNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV 116
+ V ++ GL A +L +M+ + G+ P IY +I C L ++ +A
Sbjct: 200 HGLVKFRHFGL--AMELFNDMVSV--GIRPDVYIYTGVIRSLC--------ELKDLSRAK 247
Query: 117 AYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
M + G + IV Y +LI+ L + + W A + K++ K LK DV TY TL+ G
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 177 AKCKYIDAHIGIYDEMVEKR-----------------------------------IQPNL 201
K + + + + DEM+ R + PNL
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 202 LTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRD 258
YN ++ C + EA+ LFD+M G++P+ ++Y++LI + RG + A
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK-LDTALSFLG 426
Query: 259 EMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
EM+ G+ + Y++LI G ++ AE + EM++K
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P TY A++ G C V +A+ L +M+ S + + V Y + +
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQ--VTYGCF---LDIL 762
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
E +++A +L +L+ GL+ +T Y+ LI C +G I++A
Sbjct: 763 TKGEVDMQKAVELHNAILK---GLLANTATYNMLIRGFCRQG--------RIEEASELIT 811
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
MI G+ P +TYT +I L A ++ M EKG++ D YNTL+ G
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNT 206
+ + +EM+ + + PN T T
Sbjct: 872 EMGKATELRNEMLRQGLIPNNKTSRT 897
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 162/332 (48%), Gaps = 45/332 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSD----SGLVR------- 49
MLK GF + + L+ G C + E +A LL+EM+R S M D + ++R
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 50 ----------YAYSDNSYNFVMY--------KEGGLEEASDLLPEMLELESGLVPHTLIY 91
S S++ V + K G ++EA L EM + GL ++Y
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFM--GLEADLVVY 250
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
+LI C G E+D+ A DE++ RG P +TY LI ++G+ A
Sbjct: 251 TSLIRGFCDCG--------ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
++ + M E+G++ +VYTY L+ G + + + M+EK +PN +TYN ++
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 212 CR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNG--ID 266
C+ ++A ++ + MK +PD+++YN+L+ G +G + EA ++ MLK+ D
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD-LDEASKLLYLMLKDSSYTD 421
Query: 267 PTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
P +Y+ALI GL + + QA ++ +V K
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 147/337 (43%), Gaps = 55/337 (16%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P + +Y ++ G C E+E+A EL EMK + LV + +++ K G +
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSG--CSWSLVTWGILIDAF----CKAGKM 228
Query: 68 EEASDLLPEM----LE-----------------------------LESGLVPHTLIYDTL 94
+EA L EM LE LE G P + Y+TL
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 95 IDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMI 154
I +G G L E + + MI RG+ P + TYT LI+ L VG++ A ++
Sbjct: 289 I-----RGFCKLGQLKEASEIFEF---MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 155 KEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR- 213
M EK + + TYN +++ K + + I + M ++R +P+ +TYN ++ G C
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 214 --CSEAQKLFDKM--KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML-KNGIDPT 268
EA KL M +S PD +SYN LI G + + +A + D ++ K G
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC-KENRLHQALDIYDLLVEKLGAGDR 459
Query: 269 FTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDD 305
TT L L+ +V +A EL K++ I D
Sbjct: 460 VTTNILLNSTLKAG-DVNKAMELWKQISDSKIVRNSD 495
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 140/299 (46%), Gaps = 24/299 (8%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P TY L+ G C ++++A +LL M + S +D ++ Y N+ + KE L
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY----NALIHGLCKENRL 440
Query: 68 EEA---SDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
+A DLL E L + + L+ TL +++KA+ ++
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTL-------------KAGDVNKAMELWKQISD 487
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
I TYT +I+ + G A+ ++ +M+ L+ V+ YN L+S K +D
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIA 241
+++EM P+++++N M+ G + + A+ L M +G+ PD +Y+ LI
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ + GY+ EA D+M+ +G +P D+++ E ++ EL+K++V K I
Sbjct: 608 RF-LKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 39/223 (17%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKE-------------------LLKEMKRASD------ 41
DP + +Y AL+ G C + + QA + LL +A D
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 42 ----MSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDE 97
+SDS +VR + + + K G L A LL +M E L P Y+ L+
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE--LQPSVFDYNCLLSS 538
Query: 98 CCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM 157
C +G +D+A +EM P +V++ ++I+ + G AE ++ M
Sbjct: 539 LCKEG--------SLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 158 QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPN 200
GL D++TY+ L++ + K Y+D I +D+MV+ +P+
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A ++ +M+ V+ + L+E ++ ++ A ++ M ++G +VY +N L+
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKP 231
G + + + EM + P++ +YNT++ G C E +K L ++MK SG
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
+++ +LI + + G + EA EM G++ Y +LI G E+++ + L
Sbjct: 211 SLVTWGILIDAFC-KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL 269
Query: 292 LKEMVSKG 299
E++ +G
Sbjct: 270 FDEVLERG 277
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 158/328 (48%), Gaps = 42/328 (12%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHH-EVEQAKELLKEM-KRASDMSD-------SGLVRYA 51
M ++G PT+ + L+ C + V+ ++ EM KR D SGL R+
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRF- 205
Query: 52 YSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDE 111
G ++EA L EM+E + P + Y +LI+ C G+K
Sbjct: 206 -------------GRIDEAKKLFTEMVEKDCA--PTVVTYTSLINGLC----GSK----N 242
Query: 112 IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
+D+A+ Y +EM S+GIEP + TY+ L++ L + GRS A ++ + M +G + ++ TY T
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSG 228
L++G K + I + + D M + ++P+ Y ++ G C S EA D+M G
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362
Query: 229 IKPDHLSYNLLI--AGYSYRG---GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINH 283
I P+ L++N+ + + RG Y AF + M GI T ++L+ L
Sbjct: 363 ITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKG 422
Query: 284 EVEQAEELLKEMVSKGICTPDDKKYLIL 311
E ++A +L+ E+V+ G C P + +L
Sbjct: 423 EFQKAVQLVDEIVTDG-CIPSKGTWKLL 449
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 4/184 (2%)
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
++ ++ L + AED+I M+ + + ++ GY + + ++ +M
Sbjct: 53 SFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKM 112
Query: 193 VEKRIQPNLLTYNT---MMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
+ P+ Y T +++ + + A K + M+ G+ P S N+LI G
Sbjct: 113 KDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGT 172
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYL 309
V ++ EM K G DP TY LI GL +++A++L EMV K C P Y
Sbjct: 173 VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYT 231
Query: 310 ILTD 313
L +
Sbjct: 232 SLIN 235
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 158/323 (48%), Gaps = 34/323 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K+G+ P+I T +L+ G C + + +A L+ +M V Y ++ F
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM-----------VEMGYQPDTVTFT 184
Query: 61 -----MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKA 115
+++ EA L+ M + G P + Y +I+ C +G E D A
Sbjct: 185 TLVHGLFQHNKASEAVALVERM--VVKGCQPDLVTYGAVINGLCKRG--------EPDLA 234
Query: 116 VAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
+ ++M IE +V Y +I+ L + A D+ +M+ KG+K DV+TYN L+S
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 176 YAK-CKYIDAHIGIYDEMVEKRIQPNLLTYNTMM---LGHCRCSEAQKLFDKM-KTSGIK 230
++ DA + +M+EK I P+L+ +N ++ + + EA+KL+D+M K+
Sbjct: 295 LCNYGRWSDAS-RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 231 PDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEE 290
PD ++YN LI G+ + V+E V EM + G+ TY LI G + + A+
Sbjct: 354 PDVVAYNTLIKGFC-KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 291 LLKEMVSKGICTPDDKKYLILTD 313
+ K+MVS G+ PD Y IL D
Sbjct: 413 VFKQMVSDGV-HPDIMTYNILLD 434
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 139/264 (52%), Gaps = 19/264 (7%)
Query: 53 SDNSYNFVMY-----KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKG 107
S N Y + ++ + L A +L +M++L G P + ++L++ C
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYG--PSIVTLNSLLNGFCHG------ 158
Query: 108 SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVY 167
+ I +AVA D+M+ G +P VT+T L+ LF+ ++ A +++ M KG + D+
Sbjct: 159 --NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 216
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKM 224
TY +++G K D + + ++M + +I+ +++ YNT++ G C+ +A LF+KM
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 225 KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHE 284
+T GIKPD +YN LI+ G + +A R+ +ML+ I+P ++ALI +
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRW-SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 285 VEQAEELLKEMVSKGICTPDDKKY 308
+ +AE+L EMV C PD Y
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAY 359
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 151/319 (47%), Gaps = 22/319 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + TY L+ C + A LL +M + D LV + N+ KE
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD--LVFF----NALIDAFVKE 333
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G L EA L EM++ P + Y+TLI C +++ + EM
Sbjct: 334 GKLVEAEKLYDEMVK-SKHCFPDVVAYNTLIKGFC--------KYKRVEEGMEVFREMSQ 384
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
RG+ VTYT LI F+ A+ + K+M G+ D+ TYN L+ G ++
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIA 241
+ +++ M ++ ++ +++TY TM+ C+ + + LF + G+KP+ ++Y +++
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILG-LRINHEVEQAEELLKEMVSKGI 300
G+ R G +EA + EM ++G P TY+ LI LR E AE L+KEM S G
Sbjct: 505 GFC-RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE-LIKEMRSCGF 562
Query: 301 CTPDDKKYLILTDMVHRER 319
D + ++T+M+H R
Sbjct: 563 -AGDASTFGLVTNMLHDGR 580
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 37/312 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSD--------SGLVRYAY 52
M+ G P + TY A++ G C E + A LL +M++ +D GL +Y +
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 53 SDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEI 112
D+++ DL +M G+ P Y+ LI C G + S
Sbjct: 266 MDDAF--------------DLFNKMET--KGIKPDVFTYNPLISCLCNYGRWSDAS---- 305
Query: 113 DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM-QEKGLKLDVYTYNT 171
+M+ + I P +V + LI+A + G+ AE + EM + K DV YNT
Sbjct: 306 ----RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSG 228
L+ G+ K K ++ + ++ EM ++ + N +TY T++ G + C AQ +F +M + G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 229 IKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
+ PD ++YN+L+ G G V+ A V + M K + TY +I L +VE
Sbjct: 422 VHPDIMTYNILLDGLC-NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 289 EELLKEMVSKGI 300
+L + KG+
Sbjct: 481 WDLFCSLSLKGV 492
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
++D A+ +M+ P+IV ++ L+ A+ ++ + + ++MQ G+ ++YTY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
++ + + + + I +M++ P+++T N+++ G C R SEA L D+M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
G +PD +++ L+ G ++ EA + + M+ G P TY A+I GL E +
Sbjct: 175 GYQPDTVTFTTLVHGL-FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 288 AEELLKEM 295
A LL +M
Sbjct: 234 ALNLLNKM 241
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 146/301 (48%), Gaps = 20/301 (6%)
Query: 4 VGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYK 63
+G P + TY L+ G +E A+++ ++K + D +YNF++
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA---------TYNFLLDA 829
Query: 64 EGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMI 123
G S + E+ EL + H +T+ G+ G++D D Y D M
Sbjct: 830 YG----KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD--DALDLYYDLMS 883
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
R PT TY LI+ L + GR + A+ + + M + G + + YN L++G+ K D
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
A ++ MV++ ++P+L TY+ ++ C R E F ++K SG+ PD + YNL+I
Sbjct: 944 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Query: 241 AGYSYRGGYVKEAFRVRDEM-LKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
G + ++EA + +EM GI P TY++LIL L I VE+A ++ E+ G
Sbjct: 1004 NGLG-KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 300 I 300
+
Sbjct: 1063 L 1063
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 150/352 (42%), Gaps = 66/352 (18%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYA-----YSDNSYNF 59
G P + TY L+ CT +++ AKE+ ++MK D V Y +SDN
Sbjct: 288 GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR--VTYITLLDRFSDNR--- 342
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
L+ EM + G VP + + L+D C G +A
Sbjct: 343 ------DLDSVKQFWSEMEK--DGHVPDVVTFTILVDALCKAG--------NFGEAFDTL 386
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
D M +GI P + TY LI L V R A ++ M+ G+K YTY + Y K
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKS 446
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSY 236
+ + +++M K I PN++ N + + EA+++F +K G+ PD ++Y
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNG-------------------------------- 264
N+++ YS + G + EA ++ EM++NG
Sbjct: 507 NMMMKCYS-KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 265 ---IDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+ PT TY+ L+ GL N ++++A EL + MV KG C P+ + L D
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG-CPPNTITFNTLFD 616
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 143/324 (44%), Gaps = 44/324 (13%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMK-------------------RASD---- 41
G P + TY L+ G H ++ A EL M+ ++ D
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 42 ------MSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLI 95
M G+ + N+ + + K G EA + + ++ GLVP ++ Y+ ++
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI--GLVPDSVTYNMMM 510
Query: 96 DECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIK 155
C +G EID+A+ EM+ G EP ++ LI L++ R A M
Sbjct: 511 K--CYSKVG------EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 156 EMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS 215
M+E LK V TYNTL++G K I I +++ MV+K PN +T+NT+ C+
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 216 E---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTY 272
E A K+ KM G PD +YN +I G + G VKEA +M K + P F T
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGL-VKNGQVKEAMCFFHQM-KKLVYPDFVTL 680
Query: 273 DALILGLRINHEVEQAEELLKEMV 296
L+ G+ +E A +++ +
Sbjct: 681 CTLLPGVVKASLIEDAYKIITNFL 704
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 21/291 (7%)
Query: 26 VEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLV 85
++QA L++M+ + G V AYS N ++ K EA ++ M+ LE G
Sbjct: 169 LKQAPYALRKMR------EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI-LE-GFR 220
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVG 145
P Y +L+ G+G + +ID + EM + G++P + T+T+ I L G
Sbjct: 221 PSLQTYSSLM-----VGLGKR---RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 146 RSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYN 205
+ A +++K M ++G DV TY L+ + +D ++++M R +P+ +TY
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 206 TMM--LGHCR-CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK 262
T++ R ++ + +M+ G PD +++ +L+ + G EAF D M
Sbjct: 333 TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC-KAGNFGEAFDTLDVMRD 391
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
GI P TY+ LI GL H ++ A EL M S G+ P Y++ D
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV-KPTAYTYIVFID 441
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 139/298 (46%), Gaps = 40/298 (13%)
Query: 21 CTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLEL 80
C H+ V A+ L ++ + D G+ +YN ++ GGL EA +M+E+
Sbjct: 760 CKHNNVSGARTLFEKFTK-----DLGVQPKL---PTYNLLI---GGLLEA-----DMIEI 803
Query: 81 ---------ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTI 131
+G +P Y+ L+D G G +DE+ + YK EM + E
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLD-----AYGKSGKIDELFEL--YK-EMSTHECEANT 855
Query: 132 VTYTLLIEALFEVGRSWGAEDMIKE-MQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD 190
+T+ ++I L + G A D+ + M ++ TY L+ G +K + +++
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 191 EMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRG 247
M++ +PN YN ++ G + EA LF +M G++PD +Y++L+ G
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 248 GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM-VSKGICTPD 304
V E E+ ++G++P Y+ +I GL +H +E+A L EM S+GI TPD
Sbjct: 976 -RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI-TPD 1031
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 30/243 (12%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNS--YNFVMY- 62
F PT TY L+ G + +AK+L + G++ Y N YN ++
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFE-----------GMLDYGCRPNCAIYNILING 935
Query: 63 --KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G + A L M++ G+ P Y L+D C G +D+ + Y
Sbjct: 936 FGKAGEADAACALFKRMVK--EGVRPDLKTYSVLVDCLCMVG--------RVDEGLHYFK 985
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQ-EKGLKLDVYTYNTLMSGYAKC 179
E+ G+ P +V Y L+I L + R A + EM+ +G+ D+YTYN+L+
Sbjct: 986 ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSY 236
++ IY+E+ ++PN+ T+N ++ G+ + A ++ M T G P+ +Y
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Query: 237 NLL 239
L
Sbjct: 1106 EQL 1108
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
D M R I+ TY + ++L G A +++M+E G L+ Y+YN L+ K
Sbjct: 142 DLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKS 201
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSY 236
++ + +Y M+ + +P+L TY+++M+G + L +M+T G+KP+ ++
Sbjct: 202 RFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTF 261
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
+ I R G + EA+ + M G P TY LI L +++ A+E+ ++M
Sbjct: 262 TICIRVLG-RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM- 319
Query: 297 SKGICTPDDKKYLILTDMVHRER 319
G PD Y+ L D R
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNR 342
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML G P Y L+ G E + A L K M + D L Y+ + V
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD--LKTYSVLVDCLCMV 974
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ GL +L ESGL P + Y+ +I+ G+G L+E V + +
Sbjct: 975 GRVDEGLHYFKELK------ESGLNPDVVCYNLIIN-----GLGKSHRLEE--ALVLFNE 1021
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
SRGI P + TY LI L G A + E+Q GL+ +V+T+N L+ GY+
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTM 207
+ +Y MV PN TY +
Sbjct: 1082 KPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 24/319 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K+G +P I T +LV G C + ++ A + A M G+ R D
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYV------AGQMEKMGIKRDVVVDTILIDT 57
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K + A ++L M + G+ P+ + Y +LI C G + A
Sbjct: 58 LCKNRLVVPALEVLKRMKD--RGISPNVVTYSSLITGLCKSG--------RLADAERRLH 107
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM S+ I P ++T++ LI+A + G+ + + K M + + +V+TY++L+ G
Sbjct: 108 EMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHN 167
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQ---KLFDKMKTSGIKPDHLSYN 237
+D I + D M+ K PN++TY+T+ G + S KL D M G+ + +S N
Sbjct: 168 RVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCN 227
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI GY ++ G + A V M NG+ P +Y+ ++ GL N EVE+A + M
Sbjct: 228 TLIKGY-FQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 286
Query: 298 KGICTPDDKKYLILTDMVH 316
T +D + T M+H
Sbjct: 287 ----TRNDLDIITYTIMIH 301
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 20/275 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + TY +L+ G C + A+ L EM S + ++ ++ ++Y K
Sbjct: 78 GISPNVVTYSSLITGLCKSGRLADAERRLHEMD--SKKINPNVITFSALIDAY----AKR 131
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G L + + M+++ + P+ Y +LI C + +D+A+ D MIS
Sbjct: 132 GKLSKVDSVYKMMIQMS--IDPNVFTYSSLIYGLCMH--------NRVDEAIKMLDLMIS 181
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+G P +VTY+ L F+ R ++ +M ++G+ + + NTL+ GY + ID
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 241
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKL---FDKMKTSGIKPDHLSYNLLIA 241
+G++ M + PN+ +YN ++ G E +K F+ M+ + D ++Y ++I
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH 301
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
G + VKEA+ + ++ ++P F Y +I
Sbjct: 302 GMC-KACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+++ DP + TY +L+ G C H+ V++A ++L M S +V Y+ N +
Sbjct: 144 MIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM--ISKGCTPNVVTYSTLANGF--- 198
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+K +++ LL +M + G+ +T+ +TLI KG G +ID A+
Sbjct: 199 -FKSSRVDDGIKLLDDM--PQRGVAANTVSCNTLI-----KGYFQAG---KIDLALGVFG 247
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M S G+ P I +Y +++ LF G A + MQ+ LD+ TY ++ G K
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMM 208
+ ++ ++ KR++P+ Y M+
Sbjct: 308 MVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 148/316 (46%), Gaps = 22/316 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P I T LV C +++E A ++L E+ + + LV Y Y
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPN--LVTYTTILGGY----VAR 239
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G +E A +L EML+ G P Y L+D C G +A D+M
Sbjct: 240 GDMESAKRVLEEMLD--RGWYPDATTYTVLMDGYCKLG--------RFSEAATVMDDMEK 289
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
IEP VTY ++I AL + +S A +M EM E+ D ++ + +D
Sbjct: 290 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 349
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
G++ +M++ P+ +T++ C R +EA+KLFD+ + I P L+YN LIA
Sbjct: 350 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIA 408
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
G +G + EA R+ D+M + P TY+ LI GL N V++ +L+EM+ G C
Sbjct: 409 GMCEKGE-LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG-C 466
Query: 302 TPDDKKYLILTDMVHR 317
P+ +LIL + + +
Sbjct: 467 FPNKTTFLILFEGLQK 482
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 107/204 (52%), Gaps = 12/204 (5%)
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
+K+ S GI P I T LL++AL + A ++ E+ GL ++ TY T++ GY
Sbjct: 178 FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYV 237
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHL 234
+++ + +EM+++ P+ TY +M G+C R SEA + D M+ + I+P+ +
Sbjct: 238 ARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Query: 235 SYNLLIAGY--SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELL 292
+Y ++I + G + F DEML+ P + +I L +H+V++A L
Sbjct: 298 TYGVMIRALCKEKKSGEARNMF---DEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLW 354
Query: 293 KEMVSKGICTPDDKKYLILTDMVH 316
++M+ K C PD+ +L+ ++H
Sbjct: 355 RKML-KNNCMPDNA---LLSTLIH 374
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 127/303 (41%), Gaps = 58/303 (19%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKR----ASDMSDSGLVRYAYSDNS 56
ML G+ P TTY L+ G C +A ++ +M++ ++++ ++R
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR------- 304
Query: 57 YNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV 116
+ KE EA ++ EM LE +P + + +ID C ++D+A
Sbjct: 305 ---ALCKEKKSGEARNMFDEM--LERSFMPDSSLCCKVIDALCED--------HKVDEAC 351
Query: 117 AYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
+M+ P + LI L + GR A + E EKG + TYNTL++G
Sbjct: 352 GLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGM 410
Query: 177 AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSY 236
+ + ++D+M E++ +PN T Y
Sbjct: 411 CEKGELTEAGRLWDDMYERKCKPNAFT--------------------------------Y 438
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
N+LI G S + G VKE RV +EML+ G P TT+ L GL+ + E A +++ V
Sbjct: 439 NVLIEGLS-KNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAV 497
Query: 297 SKG 299
G
Sbjct: 498 MNG 500
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 152/306 (49%), Gaps = 27/306 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K GF+P + L+ C H V+ A +L ++M+ +R+ + + +
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR----------MRFPVNLRYFTSL 258
Query: 61 MY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+Y + G + EA +L +M E +G P + Y L+ G G + + A
Sbjct: 259 LYGWCRVGKMMEAKYVLVQMNE--AGFEPDIVDYTNLLS-----GYANAGKMAD---AYD 308
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
+M RG EP YT+LI+AL +V R A + EM+ + DV TY L+SG+
Sbjct: 309 LLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHL 234
K ID + D+M++K + P+ LTY +M+ H + E +L +KM+ PD
Sbjct: 369 KWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIG 428
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
YN++I + + G VKEA R+ +EM +NG+ P T+ +I GL + +A + KE
Sbjct: 429 IYNVVIR-LACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKE 487
Query: 295 MVSKGI 300
MV++G+
Sbjct: 488 MVTRGL 493
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 40/227 (17%)
Query: 107 GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEA------------LFE----------- 143
S D + KA+ DEM G EP + L++A LFE
Sbjct: 194 ASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLR 253
Query: 144 -----------VGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC-KYIDAHIGIYDE 191
VG+ A+ ++ +M E G + D+ Y L+SGYA K DA+ + D
Sbjct: 254 YFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRD- 312
Query: 192 MVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGG 248
M + +PN Y ++ C R EA K+F +M+ + D ++Y L++G+ + G
Sbjct: 313 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC-KWG 371
Query: 249 YVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
+ + + V D+M+K G+ P+ TY +++ E+ EL+++M
Sbjct: 372 KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKM 418
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 125/321 (38%), Gaps = 71/321 (22%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSD--------SGLVRYAY 52
M + GF+P Y L+ C +E+A ++ EM+R +D SG ++
Sbjct: 313 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 372
Query: 53 SDNSYNFV--MYKEG-------------------GLEEASDLLPEMLELESGLVPHTLIY 91
D Y + M K+G EE +L+ +M ++E P IY
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH--PDIGIY 430
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
+ +I C G E+ +AV +EM G+ P + T+ ++I L G A
Sbjct: 431 NVVIRLACKLG--------EVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEAS 482
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
D KEM +GL V Y TL L NT+ L
Sbjct: 483 DHFKEMVTRGL-FSVSQYGTLK----------------------------LLLNTV-LKD 512
Query: 212 CRCSEAQKLFDKMKTSG-IKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFT 270
+ A+ ++ + + G + + LS+ + I + GY KEA EM++ P
Sbjct: 513 KKLEMAKDVWSCITSKGACELNVLSWTIWIHAL-FSKGYEKEACSYCIEMIEMDFMPQPD 571
Query: 271 TYDALILGLRINHEVEQAEEL 291
T+ L+ GL+ + E A E+
Sbjct: 572 TFAKLMKGLKKLYNREFAGEI 592
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 164/376 (43%), Gaps = 81/376 (21%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEG 65
F P TY ++ C+ +++ A ++L ++ SD ++ Y + EG
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQL--LSDNCQPTVITYTILIEATML----EG 242
Query: 66 GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIG--------------------- 104
G++EA L+ EML GL P Y+T+I C +G+
Sbjct: 243 GVDEALKLMDEMLS--RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVIS 300
Query: 105 ---------TKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIK 155
+G +E +K + +M S +P +VTY++LI L G+ A +++K
Sbjct: 301 YNILLRALLNQGKWEEGEKLMT---KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 156 EMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC--- 212
M+EKGL D Y+Y+ L++ + + +D I + M+ P+++ YNT++ C
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 213 RCSEAQKLFDK-----------------------------------MKTSGIKPDHLSYN 237
+ +A ++F K M ++GI PD ++YN
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+I+ R G V EAF + +M P+ TY+ ++LG H +E A +L+ MV
Sbjct: 478 SMISCLC-REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 298 KGICTPDDKKYLILTD 313
G C P++ Y +L +
Sbjct: 537 NG-CRPNETTYTVLIE 551
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 155/311 (49%), Gaps = 22/311 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G++P + L+ G T + +A +++ +++ +AY+ F
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPD-----VFAYNALINGFC 169
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K +++A+ +L M + P T+ Y+ +I C++G ++D A+ +
Sbjct: 170 --KMNRIDDATRVLDRMRSKD--FSPDTVTYNIMIGSLCSRG--------KLDLALKVLN 217
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+++S +PT++TYT+LIEA G A ++ EM +GLK D++TYNT++ G K
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTM---MLGHCRCSEAQKLFDKMKTSGIKPDHLSYN 237
+D + + K +P++++YN + +L + E +KL KM + P+ ++Y+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+LI R G ++EA + M + G+ P +YD LI ++ A E L+ M+S
Sbjct: 338 ILITTLC-RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 298 KGICTPDDKKY 308
G C PD Y
Sbjct: 397 DG-CLPDIVNY 406
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 143/295 (48%), Gaps = 20/295 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G +P + +Y L+ + E+ ++L+ +M S+ D +V Y+ + + ++
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKM--FSEKCDPNVVTYSILITT----LCRD 346
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G +EEA +LL M E GL P YD LI C +G +D A+ + + MIS
Sbjct: 347 GKIEEAMNLLKLMKE--KGLTPDAYSYDPLIAAFCREG--------RLDVAIEFLETMIS 396
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G P IV Y ++ L + G++ A ++ ++ E G + +YNT+ S
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ + EM+ I P+ +TYN+M+ CR EA +L M++ P ++YN+++
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
G+ + +++A V + M+ NG P TTY LI G+ +A EL ++V
Sbjct: 517 GFC-KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 20/259 (7%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGG 66
DP + TY L+ C ++E+A LLK MK + GL AYS + +EG
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMK------EKGLTPDAYSYDPLIAAFCREGR 383
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
L+ A + L M+ G +P + Y+T++ C G + D+A+ ++ G
Sbjct: 384 LDVAIEFLETMIS--DGCLPDIVNYNTVLATLCKNG--------KADQALEIFGKLGEVG 433
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
P +Y + AL+ G A MI EM G+ D TYN+++S + +D
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ +M P+++TYN ++LG C R +A + + M +G +P+ +Y +LI G
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Query: 244 SYRGGYVKEAFRVRDEMLK 262
+ GY EA + +++++
Sbjct: 554 GF-AGYRAEAMELANDLVR 571
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 134/255 (52%), Gaps = 15/255 (5%)
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
V+ K+G ++E LL ++++ G++P+ Y+ I C +G E+D AV
Sbjct: 225 VLCKKGDVKECEKLLDKVIK--RGVLPNLFTYNLFIQGLCQRG--------ELDGAVRMV 274
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+I +G +P ++TY LI L + + AE + +M +GL+ D YTYNTL++GY K
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSY 236
+ I + V P+ TY +++ G C E + LF++ GIKP+ + Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
N LI G S + G + EA ++ +EM + G+ P T++ L+ GL V A+ L+K M+
Sbjct: 395 NTLIKGLSNQ-GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 297 SKGICTPDDKKYLIL 311
SKG PD + IL
Sbjct: 454 SKGY-FPDIFTFNIL 467
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 149/299 (49%), Gaps = 22/299 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G +P TY L+ G C V+ A+ ++ D +G V ++ S
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIV------GDAVFNGFVPDQFTYRSLIDG 365
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ EG A L E L G+ P+ ++Y+TLI KG+ +G + E A +
Sbjct: 366 LCHEGETNRALALFNE--ALGKGIKPNVILYNTLI-----KGLSNQGMILE---AAQLAN 415
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM +G+ P + T+ +L+ L ++G A+ ++K M KG D++T+N L+ GY+
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKT---SGIKPDHLSYN 237
++ + I D M++ + P++ TYN+++ G C+ S+ + + + KT G P+ ++N
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 238 LLIAGYS-YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
+L+ YR + EA + +EM ++P T+ LI G N +++ A L ++M
Sbjct: 536 ILLESLCRYRK--LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 151/311 (48%), Gaps = 24/311 (7%)
Query: 3 KVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY 62
+VGF T++TY++++ + + E +E+L +M+ + + ++ Y N+
Sbjct: 33 EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR---ENVGNHMLEGVYVGAMKNYG-- 87
Query: 63 KEGGLEEASDLLPEM--LELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
++G ++EA ++ M + E + + I L+D G D+ K
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS---------GYFDQAHKVYM--- 135
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M RGI P + ++T+ +++ + R A ++ M +G +++V Y T++ G+ +
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
+ ++ +M+ + L T+N ++ C+ E +KL DK+ G+ P+ +YN
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
L I G R G + A R+ +++ G P TY+ LI GL N + ++AE L +MV+
Sbjct: 256 LFIQGLCQR-GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 298 KGICTPDDKKY 308
+G+ PD Y
Sbjct: 315 EGL-EPDSYTY 324
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 108/199 (54%), Gaps = 6/199 (3%)
Query: 107 GSLDEIDKAVAYK--DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKL 164
G +E KA Y+ +M++ G+ + T+ L+ L + G E ++ ++ ++G+
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 165 DVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLF 221
+++TYN + G + +D + + ++E+ +P+++TYN ++ G C+ S EA+
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 222 DKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRI 281
KM G++PD +YN LIAGY +GG V+ A R+ + + NG P TY +LI GL
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYC-KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 282 NHEVEQAEELLKEMVSKGI 300
E +A L E + KGI
Sbjct: 369 EGETNRALALFNEALGKGI 387
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 154/334 (46%), Gaps = 43/334 (12%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + T+ LV G C V A L+K M + Y + + F +
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVM-----------ISKGYFPDIFTFNILIH 469
Query: 65 G-----GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
G +E A ++L ML+ +G+ P Y++L++ C K S E D YK
Sbjct: 470 GYSTQLKMENALEILDVMLD--NGVDPDVYTYNSLLNGLC------KTSKFE-DVMETYK 520
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
M+ +G P + T+ +L+E+L + A +++EM+ K + D T+ TL+ G+ K
Sbjct: 521 -TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 180 KYIDAHIGIYDEMVEK-RIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLS 235
+D ++ +M E ++ + TYN ++ + A+KLF +M + PD +
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y L++ G+ + G V ++ EM++NG P+ TT +I L + V +A ++ M
Sbjct: 640 YRLMVDGFC-KTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Query: 296 VSKG--------ICTPDDKKY----LILTDMVHR 317
V KG IC D K+ L+L D++ +
Sbjct: 699 VQKGLVPEAVNTICDVDKKEVAAPKLVLEDLLKK 732
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 24/289 (8%)
Query: 19 GCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEML 78
G C + E+A +L+ + ++ + YS N + G + AS + E+
Sbjct: 350 GFCKVGKPEEAIKLIHSFRLRPNI-------FVYSSFLSN--ICSTGDMLRASTIFQEIF 400
Query: 79 ELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLI 138
EL GL+P + Y T+ID C G DKA Y ++ G P++ T T+LI
Sbjct: 401 EL--GLLPDCVCYTTMIDGYCNLG--------RTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 139 EALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQ 198
A G AE + + M+ +GLKLDV TYN LM GY K ++ + DEM I
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS 510
Query: 199 PNLLTYNTM---MLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFR 255
P++ TYN + M+ EA ++ ++ G P L++ +I G+S RG + +EAF
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDF-QEAFI 569
Query: 256 VRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
+ M + P T AL+ G +E+A L +++ G+ PD
Sbjct: 570 LWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL-KPD 617
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 105/196 (53%), Gaps = 7/196 (3%)
Query: 107 GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDV 166
G +++K DEM S GI P + TY +LI ++ G A ++I E+ +G
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 167 YTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDK 223
+ ++ G++K ++ M + R++P+++T + ++ G+C+ +K LF+K
Sbjct: 549 LAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNK 608
Query: 224 MKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL---R 280
+ +G+KPD + YN LI GY G +++A + M++ G+ P +T+ AL+LGL R
Sbjct: 609 LLDAGLKPDVVLYNTLIHGYCSVGD-IEKACELIGLMVQRGMLPNESTHHALVLGLEGKR 667
Query: 281 INHEVEQAEELLKEMV 296
+ A LL+E++
Sbjct: 668 FVNSETHASMLLEEII 683
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 21/246 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+LK G P++TT L+ C + A+ + + MK D +YN +
Sbjct: 434 LLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV---------VTYNNL 484
Query: 61 MYKEGGLEEASDLLPEMLELES-GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
M+ G + + + + E+ S G+ P Y+ LI +G ID+A
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY--------IDEANEII 536
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
E+I RG P+ + +T +I + G A + M + +K DV T + L+ GY K
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSY 236
+ ++ I +++++++ ++P+++ YNT++ G+C + +K L M G+ P+ ++
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 237 NLLIAG 242
+ L+ G
Sbjct: 657 HALVLG 662
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 16/232 (6%)
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
G+ P + + ID+ C G + + +V +K ++ GI V+ + +I+
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEAT------SVLFKLKLF--GISQDSVSVSSVIDGFC 352
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
+VG+ E+ IK + L+ +++ Y++ +S + I+ E+ E + P+ +
Sbjct: 353 KVGK---PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 203 TYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
Y TM+ G+C R +A + F + SG P L+ + ++ G R G + +A V
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
M G+ TY+ L+ G H++ + EL+ EM S GI +PD Y IL
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI-SPDVATYNIL 519
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 24/289 (8%)
Query: 19 GCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEML 78
G C + E+A +L+ + ++ + YS N + G + AS + E+
Sbjct: 350 GFCKVGKPEEAIKLIHSFRLRPNI-------FVYSSFLSN--ICSTGDMLRASTIFQEIF 400
Query: 79 ELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLI 138
EL GL+P + Y T+ID C G DKA Y ++ G P++ T T+LI
Sbjct: 401 EL--GLLPDCVCYTTMIDGYCNLG--------RTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 139 EALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQ 198
A G AE + + M+ +GLKLDV TYN LM GY K ++ + DEM I
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS 510
Query: 199 PNLLTYNTM---MLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFR 255
P++ TYN + M+ EA ++ ++ G P L++ +I G+S RG + +EAF
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDF-QEAFI 569
Query: 256 VRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
+ M + P T AL+ G +E+A L +++ G+ PD
Sbjct: 570 LWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL-KPD 617
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 105/196 (53%), Gaps = 7/196 (3%)
Query: 107 GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDV 166
G +++K DEM S GI P + TY +LI ++ G A ++I E+ +G
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 167 YTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDK 223
+ ++ G++K ++ M + R++P+++T + ++ G+C+ +K LF+K
Sbjct: 549 LAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNK 608
Query: 224 MKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL---R 280
+ +G+KPD + YN LI GY G +++A + M++ G+ P +T+ AL+LGL R
Sbjct: 609 LLDAGLKPDVVLYNTLIHGYCSVGD-IEKACELIGLMVQRGMLPNESTHHALVLGLEGKR 667
Query: 281 INHEVEQAEELLKEMV 296
+ A LL+E++
Sbjct: 668 FVNSETHASMLLEEII 683
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 21/246 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+LK G P++TT L+ C + A+ + + MK D +YN +
Sbjct: 434 LLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV---------VTYNNL 484
Query: 61 MYKEGGLEEASDLLPEMLELES-GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
M+ G + + + + E+ S G+ P Y+ LI +G ID+A
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY--------IDEANEII 536
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
E+I RG P+ + +T +I + G A + M + +K DV T + L+ GY K
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSY 236
+ ++ I +++++++ ++P+++ YNT++ G+C + +K L M G+ P+ ++
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 237 NLLIAG 242
+ L+ G
Sbjct: 657 HALVLG 662
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 16/232 (6%)
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
G+ P + + ID+ C G + + +V +K ++ GI V+ + +I+
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEAT------SVLFKLKLF--GISQDSVSVSSVIDGFC 352
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
+VG+ E+ IK + L+ +++ Y++ +S + I+ E+ E + P+ +
Sbjct: 353 KVGK---PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 203 TYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
Y TM+ G+C R +A + F + SG P L+ + ++ G R G + +A V
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
M G+ TY+ L+ G H++ + EL+ EM S GI +PD Y IL
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI-SPDVATYNIL 519
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 160/349 (45%), Gaps = 52/349 (14%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K+G++P I T +L+ G C + + A L+ +M V Y ++ F
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM-----------VEMGYKPDTVTFT 187
Query: 61 -----MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKA 115
++ EA L+ M ++ G P + Y +++ C +G T +L+ ++K
Sbjct: 188 TLIHGLFLHNKASEAVALIDRM--VQRGCQPDLVTYGAVVNGLCKRG-DTDLALNLLNKM 244
Query: 116 VAYK----------------------------DEMISRGIEPTIVTYTLLIEALFEVGRS 147
A K EM ++G+ P ++TY+ LI L GR
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304
Query: 148 WGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTM 207
A ++ +M E+ + ++ T++ L+ + K + +Y+EM+++ I PN+ TY+++
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364
Query: 208 MLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNG 264
+ G C R EA+++ + M P+ ++YN LI G+ + V + + EM + G
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC-KAKRVDKGMELFREMSQRG 423
Query: 265 IDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+ TY LI G + + A+ + K+MVS G+ P+ Y IL D
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV-HPNILTYNILLD 471
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 157/316 (49%), Gaps = 21/316 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G P + TY A+V G C + + A LL +M+ A ++ +V Y+ +S
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK--IEANVVIYSTVIDS---- 262
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K ++A +L EM G+ P+ + Y +LI C G + S
Sbjct: 263 LCKYRHEDDALNLFTEMEN--KGVRPNVITYSSLISCLCNYGRWSDAS--------RLLS 312
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+MI R I P +VT++ LI+A + G+ AE + +EM ++ + +++TY++L++G+
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYN 237
+ + + M+ K PN++TYNT++ G C+ K LF +M G+ + ++Y
Sbjct: 373 RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYT 432
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G+ ++ A V +M+ G+ P TY+ L+ GL N ++ +A + E +
Sbjct: 433 TLIHGF-FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF-EYLQ 490
Query: 298 KGICTPDDKKYLILTD 313
+ PD Y I+ +
Sbjct: 491 RSTMEPDIYTYNIMIE 506
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 121/248 (48%), Gaps = 19/248 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + TY +L+ C + A LL +M + LV ++ +++ K+
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK--INPNLVTFSALIDAF----VKK 336
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G L +A L EM++ + P+ Y +LI+ C LD + +A + MI
Sbjct: 337 GKLVKAEKLYEEMIK--RSIDPNIFTYSSLINGFCM--------LDRLGEAKQMLELMIR 386
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+ P +VTY LI + R ++ +EM ++GL + TY TL+ G+ + + D
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 446
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
++ +MV + PN+LTYN ++ G C+ ++A +F+ ++ S ++PD +YN++I
Sbjct: 447 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 506
Query: 242 GYSYRGGY 249
G G +
Sbjct: 507 GMCKAGKW 514
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEM-KRASDMSDSGLVRYAYSDNSYNF 59
M++ +P + T+ AL+ ++ +A++L +EM KR+ D + + YS F
Sbjct: 314 MIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI-----FTYSSLINGF 368
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
M G EA +L M+ + +P+ + Y+TLI+ C +DK +
Sbjct: 369 CMLDRLG--EAKQMLELMIRKDC--LPNVVTYNTLINGFCKA--------KRVDKGMELF 416
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
EM RG+ VTYT LI F+ A+ + K+M G+ ++ TYN L+ G K
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR 213
+ + +++ + ++P++ TYN M+ G C+
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 8/222 (3%)
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
G++ + + ++I+ +K + +++ D +++ ++M GI + TY +LI
Sbjct: 67 GVMAQSRPFPSIIE--FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
R A ++ +M + G + D+ T N+L++G+ I + + D+MVE +P+ +
Sbjct: 125 RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTV 184
Query: 203 TYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
T+ T++ G H + SEA L D+M G +PD ++Y ++ G RG A + ++
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD-TDLALNLLNK 243
Query: 260 MLKNGIDPTFTTYDALILGL-RINHEVEQAEELLKEMVSKGI 300
M I+ Y +I L + HE + A L EM +KG+
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHE-DDALNLFTEMENKGV 284
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 169 YNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMK 225
++ L+S AK D I ++M I NL TYN ++ CRC S A L KM
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 226 TSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEV 285
G +PD ++ N L+ G+ + G + +A + D+M++ G P T+ LI GL ++++
Sbjct: 141 KLGYEPDIVTLNSLLNGFCH-GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKA 199
Query: 286 EQAEELLKEMVSKGICTPD 304
+A L+ MV +G C PD
Sbjct: 200 SEAVALIDRMVQRG-CQPD 217
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 152/318 (47%), Gaps = 27/318 (8%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM---Y 62
F P +Y L+ G + EL MK + D+ +YN V+
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT---------RAYNIVIDGFC 598
Query: 63 KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEM 122
K G + +A LL EM G P + Y ++ID G+ +D +D+A +E
Sbjct: 599 KCGKVNKAYQLLEEMKT--KGFEPTVVTYGSVID-----GLA---KIDRLDEAYMLFEEA 648
Query: 123 ISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYI 182
S+ IE +V Y+ LI+ +VGR A +++E+ +KGL ++YT+N+L+ K + I
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 183 DAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLF---DKMKTSGIKPDHLSYNLL 239
+ + + M E + PN +TY ++ G C+ + K F +M+ G+KP +SY +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 240 IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
I+G + + G + EA + D NG P Y+A+I GL + A L +E +G
Sbjct: 769 ISGLA-KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Query: 300 ICTPDDKKYLILTDMVHR 317
+ +K ++L D +H+
Sbjct: 828 L-PIHNKTCVVLLDTLHK 844
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 139/290 (47%), Gaps = 27/290 (9%)
Query: 25 EVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY---KEGGLEEASDLLPEMLELE 81
E E+ + + +E+K R+ SY+ +++ K G E +L M E
Sbjct: 532 EPEKGRAMFEEIKAR---------RFVPDARSYSILIHGLIKAGFANETYELFYSMKE-- 580
Query: 82 SGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEAL 141
G V T Y+ +ID C G +++KA +EM ++G EPT+VTY +I+ L
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCG--------KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 142 FEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNL 201
++ R A + +E + K ++L+V Y++L+ G+ K ID I +E+++K + PNL
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 202 LTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRD 258
T+N+++ + +EA F MK P+ ++Y +LI G + K AF
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK-AFVFWQ 751
Query: 259 EMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
EM K G+ P+ +Y +I GL + +A L + G PD Y
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG-GVPDSACY 800
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 160/352 (45%), Gaps = 59/352 (16%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M GF P++ T +VLGC +++ + ++++ M++ R A+S +Y +
Sbjct: 124 MSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFK-------FRPAFS--AYTTL 174
Query: 61 MYKEGGLEEASDLLPEMLEL-ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ + + +L ++ E G P ++ TLI +G +G +D A++
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLI-----RGFAKEG---RVDSALSLL 226
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
DEM S ++ IV Y + I++ +VG+ A E++ GLK D TY +++ K
Sbjct: 227 DEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKA 286
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH---------------------------- 211
+D + +++ + + R P YNTM++G+
Sbjct: 287 NRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAY 346
Query: 212 -C---------RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML 261
C + EA K+F++MK P+ +YN+LI R G + AF +RD M
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLC-RAGKLDTAFELRDSMQ 404
Query: 262 KNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
K G+ P T + ++ L + ++++A + +EM K +CTPD+ + L D
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK-VCTPDEITFCSLID 455
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 49/284 (17%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF+PT+ TY +++ G +++A L +E K S + +V Y+ + + K
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK--SKRIELNVVIYSSLIDGFG----KV 670
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G ++EA +L E+++ GL P+ +++L+D +EI++A+ M
Sbjct: 671 GRIDEAYLILEELMQ--KGLTPNLYTWNSLLDALVKA--------EEINEALVCFQSMKE 720
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
P VTY +LI L +V + A +EMQ++G+K +Y T++SG AK I
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI-- 778
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
+EA LFD+ K +G PD YN +I G S
Sbjct: 779 ------------------------------AEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
G +AF + +E + G+ T L+ L N +EQA
Sbjct: 809 -NGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 144/307 (46%), Gaps = 21/307 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K G P + T +V C ++++A + +EM D + + D
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE-ITFCSLIDG----- 456
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K G +++A + +ML+ S ++++Y +LI K G ++ K YKD
Sbjct: 457 LGKVGRVDDAYKVYEKMLD--SDCRTNSIVYTSLI-----KNFFNHGRKEDGHKI--YKD 507
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
MI++ P + ++ +F+ G M +E++ + D +Y+ L+ G K
Sbjct: 508 -MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYN 237
+ + ++ M E+ + YN ++ G C+C ++A +L ++MKT G +P ++Y
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+I G + + + EA+ + +E I+ Y +LI G +++A +L+E++
Sbjct: 627 SVIDGLA-KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Query: 298 KGICTPD 304
KG+ TP+
Sbjct: 686 KGL-TPN 691
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 138/331 (41%), Gaps = 56/331 (16%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P Y +++G + + ++A LL E +RA G + + N + K G +
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLL-ERQRAK-----GSIPSVIAYNCILTCLRKMGKV 359
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
+EA + EM + P+ Y+ LID C G ++D A +D M G+
Sbjct: 360 DEALKVFEEM---KKDAAPNLSTYNILIDMLCRAG--------KLDTAFELRDSMQKAGL 408
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
P + T ++++ L + + A M +EM K D T+ +L+ G K +D
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 188 IYDEMVEKRIQPNLLTYNTMM---LGHCR---------------CS-------------- 215
+Y++M++ + N + Y +++ H R CS
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 216 ------EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTF 269
+ + +F+++K PD SY++LI G + G+ E + + M + G
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL-IKAGFANETYELFYSMKEQGCVLDT 587
Query: 270 TTYDALILGLRINHEVEQAEELLKEMVSKGI 300
Y+ +I G +V +A +LL+EM +KG
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 132/298 (44%), Gaps = 39/298 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML G P I TY AL+ G C +VE+A ++ + M + D+ D + Y DNS
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER-- 636
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
P+ + Y L+D C +++A D
Sbjct: 637 -------------------------PNVVTYGALLDGFCKS--------HRVEEARKLLD 663
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M G EP + Y LI+ L +VG+ A+++ EM E G +YTY++L+ Y K K
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
D + +M+E PN++ Y M+ G C+ EA KL M+ G +P+ ++Y
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
+I G+ G ++ + + M G+ P + TY LI N ++ A LL+EM
Sbjct: 784 AMIDGFGMIGK-IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 146/319 (45%), Gaps = 30/319 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K G P Y L+ C + L K S+M +G+V + +S+
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G E+A ++ EM+ G +P T Y +++ C +++ A +
Sbjct: 458 LCSAGKYEKAFSVIREMIG--QGFIPDTSTYSKVLNYLCNAS--------KMELAFLLFE 507
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM G+ + TYT+++++ + G A EM+E G +V TY L+ Y K K
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTS---------- 227
+ +++ M+ + PN++TY+ ++ GHC+ + +K +F++M S
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 627
Query: 228 ------GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRI 281
+P+ ++Y L+ G+ + V+EA ++ D M G +P YDALI GL
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFC-KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 282 NHEVEQAEELLKEMVSKGI 300
++++A+E+ EM G
Sbjct: 687 VGKLDEAQEVKTEMSEHGF 705
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 147/342 (42%), Gaps = 44/342 (12%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKR----------------------------- 38
P + TY AL+ G C H VE+A++LL M
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 39 ASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDEC 98
++MS+ G Y+ +S +K + AS +L +MLE + P+ +IY +ID
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE--NSCAPNVVIYTEMIDGL 754
Query: 99 CTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQ 158
C G + D+A M +G +P +VTYT +I+ +G+ ++++ M
Sbjct: 755 CKVG--------KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 159 EKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR-CSEA 217
KG+ + TY L+ K +D + +EM + + Y ++ G + E+
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIES 866
Query: 218 QKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEM--LKNGIDPTFTTYDAL 275
L D++ P Y LLI + ++ A R+ +E+ + +TY++L
Sbjct: 867 LGLLDEIGQDDTAPFLSVYRLLIDNL-IKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 925
Query: 276 ILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHR 317
I L + ++VE A +L EM KG+ P+ + + L + R
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGV-IPEMQSFCSLIKGLFR 966
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 130/318 (40%), Gaps = 32/318 (10%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVR-YAYSDNSYNFVMYKE 64
F P+ +TY L+ ++ A + +EM A+ D +R +AYS + K
Sbjct: 231 FRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS-------LCKV 283
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G EA L+ E E+ VP T+ Y LI C + ++A+ + + M +
Sbjct: 284 GKWREALTLV----ETEN-FVPDTVFYTKLISGLCEASL--------FEEAMDFLNRMRA 330
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
P +VTY+ L+ + + ++ M +G +N+L+ Y
Sbjct: 331 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 390
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC------RCSE---AQKLFDKMKTSGIKPDHLS 235
+ +MV+ P + YN ++ C C A+K + +M +G+ + ++
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
+ G Y K AF V EM+ G P +TY ++ L ++E A L +EM
Sbjct: 451 VSSFTRCLCSAGKYEK-AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 296 VSKGICTPDDKKYLILTD 313
G+ D Y I+ D
Sbjct: 510 KRGGL-VADVYTYTIMVD 526
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 145/298 (48%), Gaps = 46/298 (15%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P + TY ALV G C ++ A+ ++ +M S + + +V Y+ N Y K+G L
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN--VVTYSSMINGY----VKKGML 415
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG--------------IGTK------- 106
EEA LL +M + +VP+ Y T+ID G IG +
Sbjct: 416 EEAVSLLRKMED--QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILD 473
Query: 107 ---------GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM 157
G + E+ V +M+S+G+ + YT LI+ F+ G A +EM
Sbjct: 474 ALVNHLKRIGRIKEVKGLV---KDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM 530
Query: 158 QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEA 217
QE+G+ DV +YN L+SG K + A Y M EK I+P++ T+N MM + ++
Sbjct: 531 QERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 218 Q---KLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTY 272
+ KL+DKMK+ GIKP +S N+++ G G ++EA + ++M+ I P TTY
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVV-GMLCENGKMEEAIHILNQMMLMEIHPNLTTY 646
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 150/311 (48%), Gaps = 21/311 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G +P I T+ ++ + E +L +MK G+ S N +
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK------SCGIKPSLMSCNIVVGM 617
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ + G +EEA +L +M+ +E + P+ Y +D T D +
Sbjct: 618 LCENGKMEEAIHILNQMMLME--IHPNLTTYRIFLD--------TSSKHKRADAIFKTHE 667
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
++S GI+ + Y LI L ++G + A ++ +M+ +G D T+N+LM GY
Sbjct: 668 TLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGS 727
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
++ + Y M+E I PN+ TYNT++ G E K +MK+ G++PD +YN
Sbjct: 728 HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 787
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI+G + + G +K + + EM+ +G+ P +TY+ LI ++ QA ELLKEM
Sbjct: 788 ALISGQA-KIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK 846
Query: 298 KGICTPDDKKY 308
+G+ +P+ Y
Sbjct: 847 RGV-SPNTSTY 856
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 156/342 (45%), Gaps = 37/342 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRAS-------------------- 40
M+K+G P +Y L+ G C +AK L+ E+ +
Sbjct: 187 MVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEA 246
Query: 41 --DMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDEC 98
DM SG + +S + K G + E LL EM E+ + P+ + Y TL+D
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMS--VYPNHVTYTTLVDSL 304
Query: 99 CTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQ 158
I A+A +M+ RGI +V YT+L++ LF+ G AE K +
Sbjct: 305 FKANI--------YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 159 EKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CS 215
E +V TY L+ G K + + I +M+EK + PN++TY++M+ G+ +
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 216 EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDAL 275
EA L KM+ + P+ +Y +I G ++ G + A + EM G++ DAL
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGL-FKAGKEEMAIELSKEMRLIGVEENNYILDAL 475
Query: 276 ILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHR 317
+ L+ +++ + L+K+MVSKG+ T D Y L D+ +
Sbjct: 476 VNHLKRIGRIKEVKGLVKDMVSKGV-TLDQINYTSLIDVFFK 516
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 169/408 (41%), Gaps = 111/408 (27%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ P + TY +++ G +E+A LL++M+ D +V ++ +
Sbjct: 390 MLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME------DQNVVPNGFTYGTVIDG 443
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDEC-----------CTKGIGTKG-S 108
++K G E A +L EM + G+ + I D L++ K + +KG +
Sbjct: 444 LFKAGKEEMAIELSKEMRLI--GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501
Query: 109 LDEIDKA----VAYKD-----------EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDM 153
LD+I+ V +K EM RG+ +V+Y +LI + + G+ GA+
Sbjct: 502 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWA 560
Query: 154 IKEMQEKGLKLDVYTYNTLMSGYAK-------------------------CKYI------ 182
K M+EKG++ D+ T+N +M+ K C +
Sbjct: 561 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 620
Query: 183 ----DAHIGIYDEMVEKRIQPNLLTY---------------------------------- 204
+ I I ++M+ I PNL TY
Sbjct: 621 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 680
Query: 205 -NTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEM 260
NT++ C+ +K + M+ G PD +++N L+ GY + G +V++A M
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY-FVGSHVRKALSTYSVM 739
Query: 261 LKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
++ GI P TY+ +I GL +++ ++ L EM S+G+ PDD Y
Sbjct: 740 MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGM-RPDDFTY 786
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 118/238 (49%), Gaps = 22/238 (9%)
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
G+VP + ++++LI + G+ D+ +MI+ G+ P + +LI +
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVH-------DQVSLIYSKMIACGVSPDVFALNVLIHSFC 140
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
+VGR A I ++ + + +D TYNT++SG + D EMV+ I P+ +
Sbjct: 141 KVGRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTV 197
Query: 203 TYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
+YNT++ G C+ A+ L D++ + +++ +L++ Y Y ++EA+R +
Sbjct: 198 SYNTLIDGFCKVGNFVRAKALVDEISELNL----ITHTILLSSY-YNLHAIEEAYR---D 249
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHR 317
M+ +G DP T+ ++I L +V + LL+EM + P+ Y L D + +
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV-YPNHVTYTTLVDSLFK 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
G +P T+ +++L+ +G+ + KA++ M+ GI P + TY +I L
Sbjct: 708 GFIPDTVTFNSLMHGYF---VGS-----HVRKALSTYSVMMEAGISPNVATYNTIIRGLS 759
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
+ G + + EM+ +G++ D +TYN L+SG AK + + IY EM+ + P
Sbjct: 760 DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS 819
Query: 203 TYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAG 242
TYN ++ +A++L +M G+ P+ +Y +I+G
Sbjct: 820 TYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISG 862
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF P T+ +L+ G V +A + S M ++G+ + N+ +
Sbjct: 708 GFIPDTVTFNSLMHGYFVGSHVRKA------LSTYSVMMEAGISPNVATYNTIIRGLSDA 761
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G ++E L EM G+ P Y+ LI G KGS+ EMI+
Sbjct: 762 GLIKEVDKWLSEMKS--RGMRPDDFTYNALISGQAKIG-NMKGSM-------TIYCEMIA 811
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK-CKYID 183
G+ P TY +LI VG+ A +++KEM ++G+ + TY T++SG K C + D
Sbjct: 812 DGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPD 871
Query: 184 AHI-----------GIYDEMVEKR 196
G+ EMVE++
Sbjct: 872 VEWNKKAMYLAEAKGLLKEMVEEK 895
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 154/321 (47%), Gaps = 21/321 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M +G P + Y +L C +++E+A+++ + MK+ + + L Y+ + Y
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPN--LYTYSAMIDGY--- 279
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G + +A L E+L E L+P+ +++ TL+D C E+ A +
Sbjct: 280 -CKTGNVRQAYGLYKEILVAE--LLPNVVVFGTLVDGFCKA--------RELVTARSLFV 328
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+ G++P + Y LI + G A ++ EM+ L DV+TY L++G
Sbjct: 329 HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
+ ++ +M +RI P+ TYN+++ G+C+ +A L +M SG++P+ ++++
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI GY +K A + EM GI P TY ALI +++A L +M+
Sbjct: 449 TLIDGYCNVRD-IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Query: 298 KGICTPDDKKYLILTDMVHRE 318
GI P+D + L D +E
Sbjct: 508 AGI-HPNDHTFACLVDGFWKE 527
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 144/323 (44%), Gaps = 25/323 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P + Y L CC + KE K +M+ G+ Y Y
Sbjct: 190 MISRGLVPDVHIYFVL-FQCCFKQGLYSKKE-----KLLDEMTSLGIKPNVYIYTIYILD 243
Query: 61 MYKEGGLEEASDLLPEMLEL--ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
+ ++ +EEA +M EL + G++P+ Y +ID C G + +A
Sbjct: 244 LCRDNKMEEAE----KMFELMKKHGVLPNLYTYSAMIDGYCKTG--------NVRQAYGL 291
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
E++ + P +V + L++ + A + M + G+ ++Y YN L+ G+ K
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLS 235
+ +G+ EM + P++ TY ++ G C + +EA +LF KMK I P +
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
YN LI GY + +++A + EM +G++P T+ LI G +++ A L EM
Sbjct: 412 YNSLIHGYC-KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM 470
Query: 296 VSKGICTPDDKKYLILTDMVHRE 318
KGI PD Y L D +E
Sbjct: 471 TIKGI-VPDVVTYTALIDAHFKE 492
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 13/234 (5%)
Query: 78 LELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLL 137
L + GLVP IY L C +G+ +K +K + DEM S GI+P + YT+
Sbjct: 189 LMISRGLVPDVHIYFVLFQCCFKQGLYSKK-----EKLL---DEMTSLGIKPNVYIYTIY 240
Query: 138 IEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRI 197
I L + AE M + M++ G+ ++YTY+ ++ GY K + G+Y E++ +
Sbjct: 241 ILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAEL 300
Query: 198 QPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAF 254
PN++ + T++ G C+ E A+ LF M G+ P+ YN LI G+ + G + EA
Sbjct: 301 LPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHC-KSGNMLEAV 359
Query: 255 RVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
+ EM + P TY LI GL I +V +A L ++M ++ I P Y
Sbjct: 360 GLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI-FPSSATY 412
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + P + TY L+ G C +V +A L ++MK R S +YN +
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE---------RIFPSSATYNSL 415
Query: 61 MY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
++ KE +E+A DL EM SG+ P+ + + TLID C ++ +I A+
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTA--SGVEPNIITFSTLIDGYC--------NVRDIKAAMG 465
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
EM +GI P +VTYT LI+A F+ A + +M E G+ + +T+ L+ G+
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 525
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHL 234
K + I Y E ++R N + + ++ G C+ A + F M++ GI PD
Sbjct: 526 KEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDIC 585
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
SY ++ G+ + + + ++ +M+K GI P L + N V+ A
Sbjct: 586 SYVSMLKGH-LQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 166/351 (47%), Gaps = 51/351 (14%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + P + T+ L+ G C ++E A L KEM+R MS + + A D
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR-MSLNVVTYTALIDG----- 242
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K+G ++ A ++ M+E + P++L+Y T+ID G +G + D A+ +
Sbjct: 243 FCKKGEMQRAEEMYSRMVE--DRVEPNSLVYTTIID-----GFFQRG---DSDNAMKFLA 292
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M+++G+ I Y ++I L G+ A +++++M++ L D+ + T+M+ Y K
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR--------------------------- 213
+ A + +Y +++E+ +P+++ +TM+ G +
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDA 412
Query: 214 -CSEA-----QKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
C E ++LF K+ +G+ PD Y IAG +G V +AF+++ M++ G+
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV-DAFKLKTRMVQEGLLL 471
Query: 268 TFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
Y LI GL + +A ++ EM++ GI +PD + +L +E
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI-SPDSAVFDLLIRAYEKE 521
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 144/309 (46%), Gaps = 23/309 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASD--MSDSGLVRYAYSDNSYN 58
M + G +P + +Y +L+ G C + ++ A +L+ + RAS + +V + N ++
Sbjct: 82 MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL-RASHGFICKPDIVSFNSLFNGFS 140
Query: 59 FVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
K L+E + ML+ S P+ + Y T ID C G E+ A+
Sbjct: 141 ----KMKMLDEVFVYMGVMLKCCS---PNVVTYSTWIDTFCKSG--------ELQLALKS 185
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
M + P +VT+T LI+ + G A + KEM+ + L+V TY L+ G+ K
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK 245
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLS 235
+ +Y MVE R++PN L Y T++ G + A K KM G++ D +
Sbjct: 246 KGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITA 305
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y ++I+G G +KEA + ++M K+ + P + ++ + ++ A + ++
Sbjct: 306 YGVIISGLC-GNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364
Query: 296 VSKGICTPD 304
+ +G PD
Sbjct: 365 IERGF-EPD 372
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 24/250 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML G IT Y ++ G C + ++++A E++++M+++ + D +V + N+Y
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD--MVIFTTMMNAY--- 348
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+K G ++ A ++ +++E G P + T+ID GI G L E A+ Y
Sbjct: 349 -FKSGRMKAAVNMYHKLIE--RGFEPDVVALSTMID-----GIAKNGQLHE---AIVYF- 396
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
I + + V YT+LI+AL + G E + ++ E GL D + Y + ++G K
Sbjct: 397 -CIEKAND---VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
+ + MV++ + +LL Y T++ G EA+++FD+M SGI PD ++
Sbjct: 453 NLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFD 512
Query: 238 LLIAGYSYRG 247
LLI Y G
Sbjct: 513 LLIRAYEKEG 522
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 47/241 (19%)
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM 173
K +AY ++SRG P ++ ++ + ++G+ AED++ M G + DV +YN+L+
Sbjct: 42 KFLAY---LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLI 98
Query: 174 --------------------------------------SGYAKCKYIDAHIGIYDEMVEK 195
+G++K K +D + +Y ++ K
Sbjct: 99 DGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLD-EVFVYMGVMLK 157
Query: 196 RIQPNLLTYNTMMLGHCRCSEAQ---KLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKE 252
PN++TY+T + C+ E Q K F MK + P+ +++ LI GY + G ++
Sbjct: 158 CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYC-KAGDLEV 216
Query: 253 AFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILT 312
A + EM + + TY ALI G E+++AEE+ MV + P+ Y +
Sbjct: 217 AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV-EPNSLVYTTII 275
Query: 313 D 313
D
Sbjct: 276 D 276
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 145/315 (46%), Gaps = 28/315 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M G ++ +Y AL+ + E + ELL MK +S S L +YN V
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN-EKISPSIL--------TYNTV 217
Query: 61 MYK--EGGL--EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV 116
+ GGL E L EM G+ P + Y+TL+ C +G+G D+A
Sbjct: 218 INACARGGLDWEGLLGLFAEMRH--EGIQPDIVTYNTLLSACAIRGLG--------DEAE 267
Query: 117 AYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
M GI P + TY+ L+E ++ R D++ EM G D+ +YN L+ Y
Sbjct: 268 MVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAY 327
Query: 177 AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTM--MLGHC-RCSEAQKLFDKMKTSGIKPDH 233
AK I +G++ +M PN TY+ + + G R + ++LF +MK+S PD
Sbjct: 328 AKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDA 387
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
+YN+LI + GGY KE + +M++ I+P TY+ +I E A ++L+
Sbjct: 388 ATYNILIEVFG-EGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Query: 294 EMVSKGICTPDDKKY 308
M + I P K Y
Sbjct: 447 YMTANDI-VPSSKAY 460
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 120/237 (50%), Gaps = 22/237 (9%)
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVG 145
P+ IY +I +G+ +DK + DEM S+G+ ++ +YT LI A G
Sbjct: 139 PNEHIYTIMISLLGREGL--------LDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 190
Query: 146 RSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY-IDAHIGIYDEMVEKRIQPNLLTY 204
R + +++ M+ + + + TYNT+++ A+ + +G++ EM + IQP+++TY
Sbjct: 191 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 250
Query: 205 NTMMLGHCRC----SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRD-- 258
NT +L C EA+ +F M GI PD +Y+ L+ + G ++ +V D
Sbjct: 251 NT-LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF----GKLRRLEKVCDLL 305
Query: 259 -EMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDM 314
EM G P T+Y+ L+ + +++A + +M + G CTP+ Y +L ++
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG-CTPNANTYSVLLNL 361
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
+P YT++I L G ++ EM +G+ V++Y L++ Y + + +
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK----LFDKMKTSGIKPDHLSYNLLIAGY 243
+ D M ++I P++LTYNT++ R + LF +M+ GI+PD ++YN L++
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
+ R G EA V M GI P TTY L+ +E+ +LL EM S G P
Sbjct: 258 AIR-GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG-SLP 315
Query: 304 DDKKYLIL 311
D Y +L
Sbjct: 316 DITSYNVL 323
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 125/308 (40%), Gaps = 26/308 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M G P TY L+ + ++L EMK ++ D+ +YN +
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAA---------TYNIL 393
Query: 61 M--YKEGG-LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ + EGG +E L +M+E + P Y+ +I C G G ++ K +
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVE--ENIEPDMETYEGIIFAC-----GKGGLHEDARKILQ 446
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
Y M + I P+ YT +IEA + A M E G + T+++L+ +A
Sbjct: 447 Y---MTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 503
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH---CRCSEAQKLFDKMKTSGIKPDHL 234
+ + I +V+ I N T+N + + + EA K + M+ S PD
Sbjct: 504 RGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDER 563
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
+ +++ YS+ V E +EM + I P+ Y ++ + ELL+E
Sbjct: 564 TLEAVLSVYSF-ARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE 622
Query: 295 MVSKGICT 302
M+S +
Sbjct: 623 MLSNRVSN 630
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 45/337 (13%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF + +Y +L+ +A + K+M+ D L+ +YN ++
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE--DGCKPTLI-------TYNVILNVF 253
Query: 65 GGLEEASDLLPEMLEL--ESGLVPHTLIYDTLIDECCTKG-------------------- 102
G + + + ++E G+ P Y+TLI CC +G
Sbjct: 254 GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSY 312
Query: 103 --------IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMI 154
+ G +A+ +EM+ G P+IVTY LI A G A ++
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 155 KEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTM--MLGH- 211
+M EKG K DV+TY TL+SG+ + +++ + I++EM +PN+ T+N M G+
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 212 CRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTT 271
+ +E K+FD++ G+ PD +++N L+A + + G E V EM + G P T
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG-QNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 272 YDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
++ LI EQA + + M+ G+ TPD Y
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGV-TPDLSTY 527
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 148/320 (46%), Gaps = 29/320 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + GF P T+ L+ EQA + + M A D ++YN V
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL---------STYNTV 530
Query: 61 M--YKEGGLEEASDLLPEMLELESGLV-PHTLIYDTLIDECCT-KGIGTKGSLDEIDKAV 116
+ GG+ E S+ + + E+E G P+ L Y +L+ K IG SL E
Sbjct: 531 LAALARGGMWEQSEKV--LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE----- 583
Query: 117 AYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
E+ S IEP V L+ + AE E++E+G D+ T N+++S Y
Sbjct: 584 ----EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 177 AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDH 233
+ + + G+ D M E+ P++ TYN++M H R ++ ++++ ++ GIKPD
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
+SYN +I Y R +++A R+ EM +GI P TY+ I + E+A +++
Sbjct: 700 ISYNTVIYAYC-RNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 294 EMVSKGICTPDDKKYLILTD 313
M+ G C P+ Y + D
Sbjct: 759 YMIKHG-CRPNQNTYNSIVD 777
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 136/314 (43%), Gaps = 56/314 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M GF TY AL+ H ++A ++L EM
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM------------------------ 340
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ +G P + Y++LI G+ +D+A+ K+
Sbjct: 341 -------------------VLNGFSPSIVTYNSLISAYARDGM--------LDEAMELKN 373
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M +G +P + TYT L+ G+ A + +EM+ G K ++ T+N + Y
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYN 237
+ I+DE+ + P+++T+NT++ + SE +F +MK +G P+ ++N
Sbjct: 434 KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI+ YS R G ++A V ML G+ P +TY+ ++ L EQ+E++L EM
Sbjct: 494 TLISAYS-RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM-E 551
Query: 298 KGICTPDDKKYLIL 311
G C P++ Y L
Sbjct: 552 DGRCKPNELTYCSL 565
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 145/286 (50%), Gaps = 30/286 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMK----RASDMSDSGLVRYAYSDNS 56
ML G P ++TY ++ EQ++++L EM+ + ++++ L+ +AY++
Sbjct: 515 MLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL-HAYANG- 572
Query: 57 YNFVMYKEGGLEEASDLLPEMLELESGLV-PHTLIYDTLIDECCTKGIGTKGSLDEIDKA 115
KE GL + L E E+ SG++ P ++ TL+ C + L E ++A
Sbjct: 573 ------KEIGLMHS---LAE--EVYSGVIEPRAVLLKTLVLVCSKCDL-----LPEAERA 616
Query: 116 VAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
+ E+ RG P I T ++ A ++ M+E+G + TYN+LM
Sbjct: 617 FS---ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYM 673
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPD 232
+++ I E++ K I+P++++YNT++ +CR + +A ++F +M+ SGI PD
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILG 278
++YN I Y+ + +EA V M+K+G P TY++++ G
Sbjct: 734 VITYNTFIGSYAADSMF-EEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 138/307 (44%), Gaps = 21/307 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ GF P+I TY +L+ +++A EL +M D + Y+ F
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV----FTYTTLLSGF- 394
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G +E A + EM +G P+ ++ I K G +G E+ K D
Sbjct: 395 -ERAGKVESAMSIFEEMRN--AGCKPNICTFNAFI-----KMYGNRGKFTEMMKIF---D 443
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
E+ G+ P IVT+ L+ + G + KEM+ G + T+NTL+S Y++C
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
+ + +Y M++ + P+L TYNT++ R +++K+ +M+ KP+ L+Y
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
L+ Y+ G + + +E+ I+P L+L + +AE E+
Sbjct: 564 SLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 298 KGICTPD 304
+G +PD
Sbjct: 623 RGF-SPD 628
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 16/246 (6%)
Query: 63 KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEM 122
KEG + A+++ + E G Y +LI G +AV +M
Sbjct: 185 KEGRVSSAANMFNGLQE--DGFSLDVYSYTSLISAFANSG--------RYREAVNVFKKM 234
Query: 123 ISRGIEPTIVTYTLLIEALFEVGRSWGA-EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
G +PT++TY +++ ++G W ++++M+ G+ D YTYNTL++ +
Sbjct: 235 EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSL 294
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMM--LGHC-RCSEAQKLFDKMKTSGIKPDHLSYNL 238
+++EM + +TYN ++ G R EA K+ ++M +G P ++YN
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
LI+ Y+ R G + EA ++++M + G P TY L+ G +VE A + +EM +
Sbjct: 355 LISAYA-RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 299 GICTPD 304
G C P+
Sbjct: 414 G-CKPN 418
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 148/336 (44%), Gaps = 44/336 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRAS-------------------- 40
M + G P + TY L+ G +VE A + +EM+ A
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 41 ---------DMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIY 91
+++ GL + N+ V + G E S + EM +G VP +
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR--AGFVPERETF 492
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
+TLI G ++A+ M+ G+ P + TY ++ AL G +E
Sbjct: 493 NTLISAYSRCG--------SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
++ EM++ K + TY +L+ YA K I + +E+ I+P + T++L
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604
Query: 212 CRC---SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
+C EA++ F ++K G PD + N +++ Y R V +A V D M + G P+
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ-MVAKANGVLDYMKERGFTPS 663
Query: 269 FTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
TY++L+ + + ++EE+L+E+++KGI PD
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGI-KPD 698
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH 185
G + +YT LI A GR A ++ K+M+E G K + TYN +++ + K
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 186 I-GIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLL-- 239
I + ++M I P+ TYNT++ R S EA ++F++MK +G D ++YN L
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 240 IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ G S+R KEA +V +EM+ NG P+ TY++LI + +++A EL +M KG
Sbjct: 323 VYGKSHRP---KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 300 ICTPDDKKYLILTDMVHR 317
PD Y L R
Sbjct: 380 -TKPDVFTYTTLLSGFER 396
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKELLKEMKRA-SDMSDSGLVRYAYSDNSYNFVMYKEG 65
+P K LVL C +LL E +RA S++ + G + NS + +
Sbjct: 591 EPRAVLLKTLVLVCSKC-------DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 66 GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISR 125
+ +A+ +L M E G P Y++L+ G +EI + E++++
Sbjct: 644 MVAKANGVLDYMKE--RGFTPSMATYNSLM--YMHSRSADFGKSEEILR------EILAK 693
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH 185
GI+P I++Y +I A R A + EM+ G+ DV TYNT + YA +
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 186 IGIYDEMVEKRIQPNLLTYNTMMLGHCRCS--EAQKLF 221
IG+ M++ +PN TYN+++ G+C+ + + KLF
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 148/304 (48%), Gaps = 24/304 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K G+ T T+ L+ CT E A++++++ ++ + Y +SYN +
Sbjct: 178 MIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFN------YRPYKHSYNAI 228
Query: 61 MYKEGGLEEAS--DLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
++ G+++ D + E + LE G P L Y+ ++ L + D+
Sbjct: 229 LHSLLGVKQYKLIDWVYEQM-LEDGFTPDVLTYNIVM--------FANFRLGKTDRLYRL 279
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
DEM+ G P + TY +L+ L + A +++ M+E G++ V + TL+ G ++
Sbjct: 280 LDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR 339
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLS 235
++A DE V+ P+++ Y M+ G+ E A+++F +M G P+ +
Sbjct: 340 AGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFT 399
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
YN +I G+ G + KEA + EM G +P F Y L+ L+ +V +A E++K+M
Sbjct: 400 YNSMIRGFCMAGKF-KEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDM 458
Query: 296 VSKG 299
V KG
Sbjct: 459 VEKG 462
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 5/197 (2%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
++M+ G P ++TY +++ A F +G++ ++ EM + G D+YTYN L+ A
Sbjct: 246 EQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATG 305
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS--EAQKLF-DKMKTSGIKPDHLSY 236
A + + + M E ++P ++ + T++ G R EA K F D+ G PD + Y
Sbjct: 306 NKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCY 365
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
++I GY GG +++A + EM + G P TY+++I G + + ++A LLKEM
Sbjct: 366 TVMITGY-ISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 297 SKGICTPDDKKYLILTD 313
S+G C P+ Y L +
Sbjct: 425 SRG-CNPNFVVYSTLVN 440
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKE-MQEKGLKLDVY--TYNTLMS-- 174
DEMI G T T+ LLI E G A D++++ ++ K Y +YN ++
Sbjct: 176 DEMIKDGYPTTACTFNLLICTCGEAGL---ARDVVEQFIKSKTFNYRPYKHSYNAILHSL 232
Query: 175 -GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLF---DKMKTSGIK 230
G + K ID +Y++M+E P++LTYN +M + R + +L+ D+M G
Sbjct: 233 LGVKQYKLID---WVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFS 289
Query: 231 PDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEE 290
PD +YN+L+ + G A + + M + G++P + LI GL ++E +
Sbjct: 290 PDLYTYNILLHHLA-TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKY 348
Query: 291 LLKEMVSKGICTPDDKKYLIL 311
+ E V G CTPD Y ++
Sbjct: 349 FMDETVKVG-CTPDVVCYTVM 368
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 113/290 (38%), Gaps = 75/290 (25%)
Query: 80 LESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIE 139
+ES + + + DTL +C G TK +LDE++ +++ G+ L+ E
Sbjct: 73 MESTKLSASRVLDTLQQDC--PGFNTKSALDELNVSIS--------GL--------LVRE 114
Query: 140 ALFEVGRSWGAEDMIKEMQ-----------EKGLKLDVYTYNTLMSGYAKCKYIDAHIGI 188
L + R+ ++ + + ++ + Y+ LM +A+C A +
Sbjct: 115 VLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRL 174
Query: 189 YDEMVEKRIQPNLLTYNTMMLGHCRCSEA------------------------------- 217
DEM++ T+N ++ C C EA
Sbjct: 175 IDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHS 231
Query: 218 ----------QKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
++++M G PD L+YN+++ ++R G +R+ DEM+K+G P
Sbjct: 232 LLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFA-NFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 268 TFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHR 317
TY+ L+ L ++ A LL M G+ P + L D + R
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGV-EPGVIHFTTLIDGLSR 339
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 162/348 (46%), Gaps = 41/348 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M KVG PT TY +L+ G C + +A++ LK + D+ V Y N+
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT--VMY----NTLLTA 662
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG-----------IGTKGSL 109
M K G L +A L EM++ ++P + Y +LI C KG +G++
Sbjct: 663 MCKSGNLAKAVSLFGEMVQ--RSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720
Query: 110 -----------DEIDKA------VAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAED 152
D + KA + ++++M + G P IVT +I+ +G+ D
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 780
Query: 153 MIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC 212
++ EM + ++ TYN L+ GY+K K + +Y ++ I P+ LT ++++LG C
Sbjct: 781 LLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 840
Query: 213 RCSEAQ---KLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTF 269
+ + K+ G++ D ++N+LI+ G + AF + M GI
Sbjct: 841 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISK-CCANGEINWAFDLVKVMTSLGISLDK 899
Query: 270 TTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHR 317
T DA++ L NH +++ +L EM +GI +P+ +KY+ L + + R
Sbjct: 900 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGI-SPESRKYIGLINGLCR 946
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 38/307 (12%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDS---------GLVRYA 51
ML G P T+ AL+ G + ++A ++ M+ A ++ S GL + A
Sbjct: 364 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME-AKGLTPSEVSYGVLLDGLCKNA 422
Query: 52 YSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDE 111
D + F M + +G+ + Y +ID C G
Sbjct: 423 EFDLARGFYMRMK----------------RNGVCVGRITYTGMIDGLCKNGF-------- 458
Query: 112 IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
+D+AV +EM GI+P IVTY+ LI +VGR A++++ + GL + Y+T
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSG 228
L+ + + I IY+ M+ + + T+N ++ C+ +EA++ M + G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 229 IKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
I P+ +S++ LI GY G +K AF V DEM K G PTF TY +L+ GL + +A
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLK-AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 289 EELLKEM 295
E+ LK +
Sbjct: 638 EKFLKSL 644
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 152/344 (44%), Gaps = 54/344 (15%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF+P++ T A++ E LKEM + D + V+ E
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILIN------VLCAE 246
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G E++S L+ +M + SG P + Y+T++ C KG A+ D M S
Sbjct: 247 GSFEKSSYLMQKMEK--SGYAPTIVTYNTVLHWYCKKG--------RFKAAIELLDHMKS 296
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+G++ + TY +LI L R ++++M+++ + + TYNTL++G++ +
Sbjct: 297 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 356
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ +EM+ + PN +T+N ++ GH EA K+F M+ G+ P +SY +L+
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 242 GY--------------------------SYRG--------GYVKEAFRVRDEMLKNGIDP 267
G +Y G G++ EA + +EM K+GIDP
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 268 TFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
TY ALI G + A+E++ + G+ +P+ Y L
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL-SPNGIIYSTL 519
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 144/329 (43%), Gaps = 46/329 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLV------------ 48
M K G DP I TY AL+ G C + AKE++ + R +S +G++
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG-LSPNGIIYSTLIYNCCRMG 527
Query: 49 ------------------RYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLI 90
R ++ N + K G + EA + + M G++P+T+
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS--DGILPNTVS 585
Query: 91 YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
+D LI+ G G G E KA + DEM G PT TY L++ L + G A
Sbjct: 586 FDCLIN-----GYGNSG---EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
E +K + +D YNTL++ K + + ++ EMV++ I P+ TY +++ G
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 211 HCRCSEA--QKLFDKMKTS--GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID 266
CR + LF K + + P+ + Y + G ++ G K R++M G
Sbjct: 698 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM-FKAGQWKAGIYFREQMDNLGHT 756
Query: 267 PTFTTYDALILGLRINHEVEQAEELLKEM 295
P T +A+I G ++E+ +LL EM
Sbjct: 757 PDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 20/299 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G D + TY L+ C + + + LL++M++ M V Y N ++ E
Sbjct: 298 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK--RMIHPNEVTYNTLINGFS----NE 351
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G + AS LL EML GL P+ + ++ LID G ++G+ E A+ M +
Sbjct: 352 GKVLIASQLLNEMLSF--GLSPNHVTFNALID-----GHISEGNFKE---ALKMFYMMEA 401
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+G+ P+ V+Y +L++ L + A M+ G+ + TY ++ G K ++D
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ + +EM + I P+++TY+ ++ G C R A+++ ++ G+ P+ + Y+ LI
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
R G +KEA R+ + M+ G T++ L+ L +V +AEE ++ M S GI
Sbjct: 522 NCC-RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 20/305 (6%)
Query: 12 TYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEAS 71
TY ++ G C + +++A LL EM + D D +V Y+ N + K G + A
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSK--DGIDPDIVTYSALINGF----CKVGRFKTAK 498
Query: 72 DLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTI 131
+++ + + GL P+ +IY TLI CC G + +A+ + MI G
Sbjct: 499 EIVCRIYRV--GLSPNGIIYSTLIYNCCRMGC--------LKEAIRIYEAMILEGHTRDH 548
Query: 132 VTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDE 191
T+ +L+ +L + G+ AE+ ++ M G+ + +++ L++GY ++DE
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 192 MVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGG 248
M + P TY +++ G C+ EA+K + D + YN L+ + G
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC-KSG 667
Query: 249 YVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
+ +A + EM++ I P TY +LI GL + A KE ++G P+ Y
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 309 LILTD 313
D
Sbjct: 728 TCFVD 732
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH 185
G P++ T ++ ++ + G +KEM ++ + DV T+N L++ +
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 186 IGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAG 242
+ +M + P ++TYNT++ +C R A +L D MK+ G+ D +YN+LI
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 243 YSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICT 302
R + + + + +M K I P TY+ LI G +V A +LL EM+S G+ +
Sbjct: 313 LC-RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL-S 370
Query: 303 PDDKKYLILTD 313
P+ + L D
Sbjct: 371 PNHVTFNALID 381
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 151/371 (40%), Gaps = 81/371 (21%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRAS---DMSDSGLVRYAYS---D 54
M +G P I T A++ G ++E+ +LL EM + +++ ++ + YS D
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809
Query: 55 NSYNFVMYKEGGLEEASDLLPEMLELES---GLVPHTLI--------------------- 90
S +F++Y+ L + +LP+ L S G+ ++
Sbjct: 810 VSTSFLLYRSIIL---NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 866
Query: 91 YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
++ LI +CC G EI+ A M S GI T ++ L R +
Sbjct: 867 FNMLISKCCANG--------EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSG----------------------------------- 175
++ EM ++G+ + Y L++G
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 978
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPD 232
AKC D + M++ ++ P + ++ T+M C+ EA +L M G+K D
Sbjct: 979 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 1038
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEV-EQAEEL 291
+SYN+LI G +G + AF + +EM +G TTY ALI GL A+ +
Sbjct: 1039 LVSYNVLITGLCAKGD-MALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1097
Query: 292 LKEMVSKGICT 302
LK+++++G T
Sbjct: 1098 LKDLLARGFIT 1108
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 160/342 (46%), Gaps = 63/342 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMK----RASDMSDSGLVRYAYSDNS 56
M+K+GF+P + T+ +L+ G C + +E A L ++ + + ++ + L+R
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR------- 196
Query: 57 YNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV 116
+ K L A +L +M +G P+ + Y+ L+ C IG G D A
Sbjct: 197 ---CLCKNRHLNHAVELFNQMGT--NGSRPNVVTYNALVTGLCE--IGRWG-----DAAW 244
Query: 117 AYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYT-------- 168
+D M+ R IEP ++T+T LI+A +VG+ A+++ M + + DV+T
Sbjct: 245 LLRD-MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 169 ---------------------------YNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNL 201
Y TL+ G+ K K ++ + I+ EM +K + N
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 202 LTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRD 258
+TY ++ G+C R AQ++F++M + PD +YN+L+ G G V++A + +
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK-VEKALMIFE 422
Query: 259 EMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
M K +D TY +I G+ +VE A +L + SKG+
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 149/301 (49%), Gaps = 14/301 (4%)
Query: 11 TTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEA 70
T + ++V G H + + + + A+ +S G + + +SY ++ GL
Sbjct: 7 TGFASIVKG--FHLHSHRHRLQISNPRTAASLSLCGFCFWIRAFSSYRKIL--RNGLHNL 62
Query: 71 SDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPT 130
+ L+L + +V H+ ++ID T+ + ++ D ++ ++M GI P
Sbjct: 63 Q--FNDALDLFTRMV-HSRPLPSIIDF--TRLLSVIAKMNRYDVVISLFEQMQILGIPPL 117
Query: 131 IVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD 190
+ T +++ + + A + +M + G + D+ T+ +L++GY I+ I ++D
Sbjct: 118 LCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD 177
Query: 191 EMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRG 247
+++ +PN++TY T++ C+ + A +LF++M T+G +P+ ++YN L+ G G
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG 237
Query: 248 GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKK 307
+ A+ +RD M+K I+P T+ ALI ++ +A+EL M+ + PD
Sbjct: 238 RWGDAAWLLRD-MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV-YPDVFT 295
Query: 308 Y 308
Y
Sbjct: 296 Y 296
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 131/275 (47%), Gaps = 20/275 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K +P + T+ AL+ ++ +AKEL M + S D + Y
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV----FTYGSLINGLC 304
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
MY G L+EA + L +G P+ +IY TLI C ++ +
Sbjct: 305 MY--GLLDEARQMF--YLMERNGCYPNEVIYTTLIHGFCKS--------KRVEDGMKIFY 352
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM +G+ +TYT+LI+ VGR A+++ +M + D+ TYN L+ G
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFD---KMKTSGIKPDHLSYN 237
++ + I++ M ++ + N++TY ++ G C+ + + FD + + G+KP+ ++Y
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTY 272
+I+G+ R G + EA + +M ++G P + Y
Sbjct: 473 TMISGFCRR-GLIHEADSLFKKMKEDGFLPNESVY 506
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM 173
+A + +M+ G EP +VT+T L+ R A + ++ G K +V TY TL+
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 174 SGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIK 230
K ++++ + ++++M +PN++TYN ++ G C R +A L M I+
Sbjct: 196 RCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE 255
Query: 231 PDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEE 290
P+ +++ LI + + G + EA + + M++ + P TY +LI GL + +++A +
Sbjct: 256 PNVITFTALIDAF-VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 291 LLKEMVSKGICTPDDKKYLILTDMVH 316
+ M G C P++ +I T ++H
Sbjct: 315 MFYLMERNG-CYPNE---VIYTTLIH 336
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 5/187 (2%)
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM +GI P ++TY +I++ GR A+ +++ M EK + D+ T++ L++ + K +
Sbjct: 35 EMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKER 94
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ IY EM+ I P +TYN+M+ G C R +A+++ D M + G PD ++++
Sbjct: 95 KVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFS 154
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI GY + V + EM + GI TY LI G +++ A++LL EM+S
Sbjct: 155 TLINGYC-KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS 213
Query: 298 KGICTPD 304
G+ PD
Sbjct: 214 CGV-APD 219
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 33/233 (14%)
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG------------------ 102
+ K+G A +L EM E G+ P+ L Y+ +ID C G
Sbjct: 20 LCKDGNHINAQNLFTEMHE--KGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN 77
Query: 103 --IGTKGSL-------DEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDM 153
I T +L ++ +A EM+ I PT +TY +I+ + R A+ M
Sbjct: 78 PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 137
Query: 154 IKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR 213
+ M KG DV T++TL++GY K K +D + I+ EM + I N +TY T++ G C+
Sbjct: 138 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 197
Query: 214 CSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKN 263
+ AQ L ++M + G+ PD+++++ ++AG + +++AF + +++ K+
Sbjct: 198 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE-LRKAFAILEDLQKS 249
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 16/233 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G P + TY ++ C A +LL+ M D +V ++ N++
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD--IVTFSALINAF--- 90
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
KE + EA ++ EML + P T+ Y+++ID C + D +D A D
Sbjct: 91 -VKERKVSEAEEIYKEMLRW--SIFPTTITYNSMIDGFCKQ--------DRVDDAKRMLD 139
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M S+G P +VT++ LI + R ++ EM +G+ + TY TL+ G+ +
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 199
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDH 233
+DA + +EM+ + P+ +T++ M+ G C E +K F ++ DH
Sbjct: 200 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDH 252
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 38/288 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M G +P I TY L+ G C +E+ +A E+ K++K S S +V Y + Y
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD-VVTYTSMISGY--- 287
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDE--------------------CCT 100
K G + EAS LL +ML L G+ P + ++ L+D C
Sbjct: 288 -CKAGKMREASSLLDDMLRL--GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 101 KGIGTKGSL-------DEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDM 153
+ T SL ++ + +EM +RG+ P TY++LI AL R A ++
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 154 IKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC- 212
+ ++ K + + YN ++ G+ K ++ I +EM +K+ +P+ +T+ +++GHC
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 213 --RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRD 258
R EA +F KM G PD ++ + L++ + G KEA+ +
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL-LKAGMAKEAYHLNQ 511
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 123/250 (49%), Gaps = 15/250 (6%)
Query: 55 NSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDK 114
NS + K +E+A L E L +S T ++ LI C G+G + +K
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQS--CNDTKTFNILIRGLC--GVG------KAEK 224
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGL-KLDVYTYNTLM 173
A+ M G EP IVTY LI+ + A +M K+++ + DV TY +++
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 174 SGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIK 230
SGY K + + D+M+ I P +T+N ++ G+ + E A+++ KM + G
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 231 PDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEE 290
PD +++ LI GY R G V + FR+ +EM G+ P TY LI L + + +A E
Sbjct: 345 PDVVTFTSLIDGYC-RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE 403
Query: 291 LLKEMVSKGI 300
LL ++ SK I
Sbjct: 404 LLGQLASKDI 413
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 140/316 (44%), Gaps = 59/316 (18%)
Query: 2 LKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM 61
K+ + TY L C + A ++ + MK ++ L+ + S
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS------F 148
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
++G L A+ LL + E+E + + +TL+ LD ++ A+ DE
Sbjct: 149 AEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVK------------LDRVEDAMKLFDE 196
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
+ T+ +LI L VG++ EK L+L +MSG+
Sbjct: 197 HLRFQSCNDTKTFNILIRGLCGVGKA-----------EKALELL-----GVMSGFG---- 236
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGI-KPDHLSYN 237
+P+++TYNT++ G C+ +E A ++F +K+ + PD ++Y
Sbjct: 237 ---------------CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+I+GY + G ++EA + D+ML+ GI PT T++ L+ G E+ AEE+ +M+S
Sbjct: 282 SMISGYC-KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 298 KGICTPDDKKYLILTD 313
G C PD + L D
Sbjct: 341 FG-CFPDVVTFTSLID 355
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 38/288 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M G +P I TY L+ G C +E+ +A E+ K++K S S +V Y + Y
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD-VVTYTSMISGY--- 287
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDE--------------------CCT 100
K G + EAS LL +ML L G+ P + ++ L+D C
Sbjct: 288 -CKAGKMREASSLLDDMLRL--GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 101 KGIGTKGSL-------DEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDM 153
+ T SL ++ + +EM +RG+ P TY++LI AL R A ++
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 154 IKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC- 212
+ ++ K + + YN ++ G+ K ++ I +EM +K+ +P+ +T+ +++GHC
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 213 --RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRD 258
R EA +F KM G PD ++ + L++ + G KEA+ +
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL-LKAGMAKEAYHLNQ 511
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 123/250 (49%), Gaps = 15/250 (6%)
Query: 55 NSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDK 114
NS + K +E+A L E L +S T ++ LI C G+G + +K
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQS--CNDTKTFNILIRGLC--GVG------KAEK 224
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGL-KLDVYTYNTLM 173
A+ M G EP IVTY LI+ + A +M K+++ + DV TY +++
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 174 SGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIK 230
SGY K + + D+M+ I P +T+N ++ G+ + E A+++ KM + G
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 231 PDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEE 290
PD +++ LI GY R G V + FR+ +EM G+ P TY LI L + + +A E
Sbjct: 345 PDVVTFTSLIDGYC-RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE 403
Query: 291 LLKEMVSKGI 300
LL ++ SK I
Sbjct: 404 LLGQLASKDI 413
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 140/316 (44%), Gaps = 59/316 (18%)
Query: 2 LKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM 61
K+ + TY L C + A ++ + MK ++ L+ + S
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS------F 148
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
++G L A+ LL + E+E + + +TL+ LD ++ A+ DE
Sbjct: 149 AEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVK------------LDRVEDAMKLFDE 196
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
+ T+ +LI L VG++ EK L+L +MSG+
Sbjct: 197 HLRFQSCNDTKTFNILIRGLCGVGKA-----------EKALELL-----GVMSGFG---- 236
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGI-KPDHLSYN 237
+P+++TYNT++ G C+ +E A ++F +K+ + PD ++Y
Sbjct: 237 ---------------CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+I+GY + G ++EA + D+ML+ GI PT T++ L+ G E+ AEE+ +M+S
Sbjct: 282 SMISGYC-KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 298 KGICTPDDKKYLILTD 313
G C PD + L D
Sbjct: 341 FG-CFPDVVTFTSLID 355
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 155/320 (48%), Gaps = 23/320 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKR--ASDMSDSGLVRYAYSDNSYN 58
+L+ + PT TY L+ C +E+A+ +L EM+ S + V AY +
Sbjct: 203 LLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEG--- 259
Query: 59 FVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
+M ++G EEA D+ M P T Y+ +I+ G +K + +
Sbjct: 260 -LMKRKGNTEEAIDVFQRMKR--DRCKPTTETYNLMIN---LYGKASKSYM-----SWKL 308
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
EM S +P I TYT L+ A G AE++ +++QE GL+ DVY YN LM Y++
Sbjct: 309 YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR 368
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLS 235
Y I+ M +P+ +YN M+ + R S+A+ +F++MK GI P S
Sbjct: 369 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 428
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP-TFTTYDALILGLRINHEVEQAEELLKE 294
+ LL++ YS + V + + EM +NG++P TF L L R+ + + E++L E
Sbjct: 429 HMLLLSAYS-KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG-QFTKMEKILAE 486
Query: 295 MVSKGICTPDDKKYLILTDM 314
M G CT D Y IL ++
Sbjct: 487 M-ENGPCTADISTYNILINI 505
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 21/296 (7%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P I TY ALV E+A+E+ ++++ D + + Y SY+ Y G
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQE--DGLEPDVYVYNALMESYSRAGYPYGAA 376
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
E S L+ M G P Y+ ++D G+ + A A +EM GI
Sbjct: 377 EIFS-LMQHM-----GCEPDRASYNIMVDAYGRAGLHSD--------AEAVFEEMKRLGI 422
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
PT+ ++ LL+ A + E ++KEM E G++ D + N++++ Y +
Sbjct: 423 APTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEK 482
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
I EM ++ TYN ++ + + ++LF ++K +PD +++ I YS
Sbjct: 483 ILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYS 542
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ YVK V +EM+ +G P T L+ +VEQ +L+ M KG+
Sbjct: 543 RKKLYVK-CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGV 596
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 17/252 (6%)
Query: 73 LLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIV 132
L+ E + +S P + ++ LID G K E + Y + SR + PT
Sbjct: 162 LVCEWILRKSSFQPDVICFNLLID-----AYGQKFQYKEAESL--YVQLLESRYV-PTED 213
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLK---LDVYTYNTLMSGYAKCK-YIDAHIGI 188
TY LLI+A G AE ++ EMQ + + V YN + G K K + I +
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 273
Query: 189 YDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSY 245
+ M R +P TYN M+ + + S+ + KL+ +M++ KP+ +Y L+ ++
Sbjct: 274 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA- 332
Query: 246 RGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDD 305
R G ++A + +++ ++G++P Y+AL+ A E+ M G C PD
Sbjct: 333 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMG-CEPDR 391
Query: 306 KKYLILTDMVHR 317
Y I+ D R
Sbjct: 392 ASYNIMVDAYGR 403
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 155/320 (48%), Gaps = 23/320 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKR--ASDMSDSGLVRYAYSDNSYN 58
+L+ + PT TY L+ C +E+A+ +L EM+ S + V AY +
Sbjct: 181 LLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEG--- 237
Query: 59 FVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
+M ++G EEA D+ M P T Y+ +I+ G +K + +
Sbjct: 238 -LMKRKGNTEEAIDVFQRMKR--DRCKPTTETYNLMIN---LYGKASKSYM-----SWKL 286
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
EM S +P I TYT L+ A G AE++ +++QE GL+ DVY YN LM Y++
Sbjct: 287 YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR 346
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLS 235
Y I+ M +P+ +YN M+ + R S+A+ +F++MK GI P S
Sbjct: 347 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 406
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP-TFTTYDALILGLRINHEVEQAEELLKE 294
+ LL++ YS + V + + EM +NG++P TF L L R+ + + E++L E
Sbjct: 407 HMLLLSAYS-KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG-QFTKMEKILAE 464
Query: 295 MVSKGICTPDDKKYLILTDM 314
M G CT D Y IL ++
Sbjct: 465 M-ENGPCTADISTYNILINI 483
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 21/296 (7%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P I TY ALV E+A+E+ ++++ D + + Y SY+ Y G
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQE--DGLEPDVYVYNALMESYSRAGYPYGAA 354
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
E S L+ M G P Y+ ++D G+ + A A +EM GI
Sbjct: 355 EIFS-LMQHM-----GCEPDRASYNIMVDAYGRAGLHSD--------AEAVFEEMKRLGI 400
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
PT+ ++ LL+ A + E ++KEM E G++ D + N++++ Y +
Sbjct: 401 APTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEK 460
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
I EM ++ TYN ++ + + ++LF ++K +PD +++ I YS
Sbjct: 461 ILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYS 520
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ YVK V +EM+ +G P T L+ +VEQ +L+ M KG+
Sbjct: 521 RKKLYVK-CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGV 574
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 17/252 (6%)
Query: 73 LLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIV 132
L+ E + +S P + ++ LID G K E + Y + SR + PT
Sbjct: 140 LVCEWILRKSSFQPDVICFNLLID-----AYGQKFQYKEAESL--YVQLLESRYV-PTED 191
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLK---LDVYTYNTLMSGYAKCK-YIDAHIGI 188
TY LLI+A G AE ++ EMQ + + V YN + G K K + I +
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 189 YDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSY 245
+ M R +P TYN M+ + + S+ + KL+ +M++ KP+ +Y L+ ++
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA- 310
Query: 246 RGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDD 305
R G ++A + +++ ++G++P Y+AL+ A E+ M G C PD
Sbjct: 311 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMG-CEPDR 369
Query: 306 KKYLILTDMVHR 317
Y I+ D R
Sbjct: 370 ASYNIMVDAYGR 381
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 139/280 (49%), Gaps = 22/280 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K+G +P + TY L+ ++ +++A+ ++ EM R SG+ AYS YN +
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVR------SGIQLDAYS---YNQL 296
Query: 61 MYKEGGLEEASDLLPEML-ELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ + + M+ E+E + Y TLI+ C + T+ KA
Sbjct: 297 LKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFC-RASNTR-------KAYRLF 348
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+EM +G+ +VTYT LI+A G S A+ ++ +M E GL D Y T++ K
Sbjct: 349 EEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKS 408
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSY 236
+D G++++M+E I P+ ++YN+++ G C R +EA KLF+ MK PD L++
Sbjct: 409 GNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTF 468
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
+I G RG + A++V D+M+ G D LI
Sbjct: 469 KFIIGGL-IRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 153/346 (44%), Gaps = 61/346 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G +P + +Y L+ G +V A E+ M R+ DN
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSG----------VSPDNKACAA 189
Query: 61 MYKEGGLEEASDLLPEML--ELESGLVP-HTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ DL EM+ E++S V T++Y+ LI C G I+KA A
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG--------RIEKAEA 241
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
K M G EP +VTY +L+ ++ AE ++ EM G++LD Y+YN L+ +
Sbjct: 242 LKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHC 301
Query: 178 KCKYIDAHIG-----------------------------------IYDEMVEKRIQPNLL 202
+ + D +++EM +K + N++
Sbjct: 302 RVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVV 361
Query: 203 TYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
TY +++ R S A+KL D+M G+ PD + Y ++ + + G V +A+ V ++
Sbjct: 362 TYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL-DHLCKSGNVDKAYGVFND 420
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDD 305
M+++ I P +Y++LI GL + V +A +L ++M K C PD+
Sbjct: 421 MIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE-CCPDE 465
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 57/306 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M +GF TY + G C + + LL +M+
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETL--------------------- 108
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
G +P ++ +D C + +++ AV
Sbjct: 109 ----------------------GFIPDIWAFNVYLDLLCRE--------NKVGFAVQTFF 138
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+ RG EP +V+YT+LI LF G+ A ++ M G+ D L+ G +
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 181 YID-AHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSY 236
+D A+ + +E+ R++ + + YN ++ G C R +A+ L M G +PD ++Y
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTY 258
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI-LGLRINHEVEQAEELLKEM 295
N+L+ Y Y +K A V EM+++GI +Y+ L+ R++H + ++KEM
Sbjct: 259 NVLL-NYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEM 317
Query: 296 VSKGIC 301
+G C
Sbjct: 318 EPRGFC 323
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 4/186 (2%)
Query: 112 IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
ID AV DEM Y I L R AE + +M+ G L +TY+
Sbjct: 25 IDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSR 84
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSG 228
+SG K K D + +M P++ +N + CR ++ A + F M G
Sbjct: 85 FISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRG 144
Query: 229 IKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
+PD +SY +LI G +R G V +A + + M+++G+ P AL++GL +V+ A
Sbjct: 145 REPDVVSYTILINGL-FRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Query: 289 EELLKE 294
E++ E
Sbjct: 204 YEMVAE 209
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEE 69
+ +Y L+ C +A L +EM++ G+V + S +EG
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQ------KGMVMNVVTYTSLIKAFLREGNSSV 378
Query: 70 ASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEP 129
A LL +M EL GL P + Y T++D C G +DKA ++MI I P
Sbjct: 379 AKKLLDQMTEL--GLSPDRIFYTTILDHLCKSG--------NVDKAYGVFNDMIEHEITP 428
Query: 130 TIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIY 189
++Y LI L GR A + ++M+ K D T+ ++ G + K + A ++
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVW 488
Query: 190 DEMVEKRIQPNLLTYNTMMLGHCRCS 215
D+M++K + +T++ C S
Sbjct: 489 DQMMDKGFTLDRDVSDTLIKASCSMS 514
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 138/290 (47%), Gaps = 17/290 (5%)
Query: 34 KEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDT 93
K +K +M + G + S N+ V+ K +E+A +L L T+ Y+
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF---RALRGRFSVDTVTYNV 200
Query: 94 LIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDM 153
+++ C + KA+ EM+ RGI P + TY +++ F G+ A +
Sbjct: 201 ILNGWCL--------IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 252
Query: 154 IKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR 213
EM+++ ++DV TY T++ G+ I ++DEM+ + + P++ TYN M+ C+
Sbjct: 253 FLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK 312
Query: 214 ---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFT 270
A +F++M G +P+ +YN+LI G + G + M G +P F
Sbjct: 313 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL-FHAGEFSRGEELMQRMENEGCEPNFQ 371
Query: 271 TYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL-TDMVHRER 319
TY+ +I EVE+A L ++M S G C P+ Y IL + M R+R
Sbjct: 372 TYNMMIRYYSECSEVEKALGLFEKMGS-GDCLPNLDTYNILISGMFVRKR 420
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 16/210 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G +P +TTY ++ G ++ A E EMK+ D + Y+ + F
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK----RDCEIDVVTYTTVVHGFG 276
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G ++ A ++ EM+ G++P Y+ +I C K D ++ AV +
Sbjct: 277 V--AGEIKRARNVFDEMIR--EGVLPSVATYNAMIQVLCKK--------DNVENAVVMFE 324
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM+ RG EP + TY +LI LF G E++++ M+ +G + + TYN ++ Y++C
Sbjct: 325 EMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECS 384
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
++ +G++++M PNL TYN ++ G
Sbjct: 385 EVEKALGLFEKMGSGDCLPNLDTYNILISG 414
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 166/379 (43%), Gaps = 85/379 (22%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQA--------------------KELLKEMKRAS 40
M+K+G + T+ LV G C ++E A +LK M +
Sbjct: 195 MVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKG 254
Query: 41 DMSD----------SGLV--RYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHT 88
+SD +GLV R Y++ Y + K G L+EA ++ E+++ ++ ++P
Sbjct: 255 RLSDLKELLLDMKKNGLVPNRVTYNNLVYGYC--KLGSLKEAFQIV-ELMK-QTNVLPDL 310
Query: 89 LIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSW 148
Y+ LI+ C G +G + D M S ++P +VTY LI+ FE+G S
Sbjct: 311 CTYNILINGLCNAGSMREG--------LELMDAMKSLKLQPDVVTYNTLIDGCFELGLSL 362
Query: 149 GAEDMIKEMQEKGLKL------------------------------------DVYTYNTL 172
A ++++M+ G+K D+ TY+TL
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 173 MSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGI 229
+ Y K + + + EM +K I+ N +T NT++ C + EA L + G
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 230 KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAE 289
D ++Y LI G+ +R V++A + DEM K I PT +T+++LI GL + + E A
Sbjct: 483 IVDEVTYGTLIMGF-FREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 290 ELLKEMVSKGICTPDDKKY 308
E E+ G+ PDD +
Sbjct: 542 EKFDELAESGLL-PDDSTF 559
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 166/349 (47%), Gaps = 41/349 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K G P TY LV G C +++A ++++ MK+ + + D L Y N
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD--LCTYNILING---- 319
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGI--------------GTK 106
+ G + E +L+ M L+ L P + Y+TLID C G+ G K
Sbjct: 320 LCNAGSMREGLELMDAMKSLK--LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVK 377
Query: 107 GSLDEIDKAVAY-----KDEMISR---------GIEPTIVTYTLLIEALFEVGRSWGAED 152
+ + ++ + K E ++R G P IVTY LI+A +VG GA +
Sbjct: 378 ANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437
Query: 153 MIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC 212
M++EM +KG+K++ T NT++ K + +D + + ++ + +TY T+++G
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF 497
Query: 213 RCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTF 269
R + +K ++D+MK I P ++N LI G + G + A DE+ ++G+ P
Sbjct: 498 REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK-TELAMEKFDELAESGLLPDD 556
Query: 270 TTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
+T++++ILG VE+A E E + PD+ IL + + +E
Sbjct: 557 STFNSIILGYCKEGRVEKAFEFYNESIKHSF-KPDNYTCNILLNGLCKE 604
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 144/296 (48%), Gaps = 19/296 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF P I TY L+ ++ A E+++EM + G+ + N+ + KE
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ------KGIKMNTITLNTILDALCKE 464
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
L+EA +LL + G + + Y TLI G + ++++KA+ DEM
Sbjct: 465 RKLDEAHNLLNSAHK--RGFIVDEVTYGTLI-----MGFFRE---EKVEKALEMWDEMKK 514
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
I PT+ T+ LI L G++ A + E+ E GL D T+N+++ GY K ++
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKT--SGIKPDHLSYNLLIAG 242
Y+E ++ +P+ T N ++ G C+ +K + T + D ++YN +I+
Sbjct: 575 AFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISA 634
Query: 243 YSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
+ + +KEA+ + EM + G++P TY++ I L + ++ + +ELLK+ K
Sbjct: 635 FC-KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 128/263 (48%), Gaps = 26/263 (9%)
Query: 46 GLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGT 105
GLVRY S + A ++ +M+++ G+ + ++ L++ C +G
Sbjct: 175 GLVRYPSS-----------FSISSAREVFDDMVKI--GVSLNVQTFNVLVNGYCLEG--- 218
Query: 106 KGSLDEIDKAVAYKDEMISR-GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKL 164
+++ A+ + M+S + P VTY +++A+ + GR ++++ +M++ GL
Sbjct: 219 -----KLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVP 273
Query: 165 DVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLF 221
+ TYN L+ GY K + I + M + + P+L TYN ++ G C E +L
Sbjct: 274 NRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM 333
Query: 222 DKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRI 281
D MK+ ++PD ++YN LI G + G EA ++ ++M +G+ T++ + L
Sbjct: 334 DAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Query: 282 NHEVEQAEELLKEMVSKGICTPD 304
+ E +KE+V +PD
Sbjct: 393 EEKREAVTRKVKELVDMHGFSPD 415
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 102/198 (51%), Gaps = 27/198 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M KV PT++T+ +L+ G C H + E A M++ ++++SGL+ D+++N +
Sbjct: 512 MKKVKITPTVSTFNSLIGGLCHHGKTELA------MEKFDELAESGLLP---DDSTFNSI 562
Query: 61 MY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ KEG +E+A + E ++ P + L++ C +G+ +KA+
Sbjct: 563 ILGYCKEGRVEKAFEFYNE--SIKHSFKPDNYTCNILLNGLCKEGM--------TEKALN 612
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
+ + +I E VTY +I A + + A D++ EM+EKGL+ D +TYN+ +S
Sbjct: 613 FFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLM 671
Query: 178 KCKYIDAHIGIYDEMVEK 195
+ D + DE+++K
Sbjct: 672 E----DGKLSETDELLKK 685
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 3 KVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV-- 60
K GF TY L++G +VE+A E+ EMK+ V+ + +++N +
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK---------VKITPTVSTFNSLIG 529
Query: 61 -MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ G E A + E+ ESGL+P ++++I C +G ++KA +
Sbjct: 530 GLCHHGKTELAMEKFDEL--AESGLLPDDSTFNSIILGYCKEG--------RVEKAFEFY 579
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+E I +P T +L+ L + G + A + + E+ ++D TYNT++S + K
Sbjct: 580 NESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKD 638
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYN---TMMLGHCRCSEAQKLFDKM 224
K + + EM EK ++P+ TYN ++++ + SE +L K
Sbjct: 639 KKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Query: 169 YNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR------CSEAQKLFD 222
++ +S Y + I+ +M+ +++PNLLT NT+++G R S A+++FD
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 223 KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKN-GIDPTFTTYDALILGLRI 281
M G+ + ++N+L+ GY G +++A + + M+ ++P TY+ ++ +
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGK-LEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 282 NHEVEQAEELLKEMVSKGI 300
+ +ELL +M G+
Sbjct: 253 KGRLSDLKELLLDMKKNGL 271
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 150/303 (49%), Gaps = 20/303 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M VG P + TY ++ G C H VE+A ELL++M + D V Y Y+ Y
Sbjct: 303 MQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDK--VSY-YTIMGY--- 356
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ KE + E DL+ +M + E GLVP + Y+TLI + TK D D+A+ +
Sbjct: 357 LCKEKRIVEVRDLMKKMAK-EHGLVPDQVTYNTLIH------MLTKH--DHADEALWFLK 407
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG-LKLDVYTYNTLMSGYAKC 179
+ +G + Y+ ++ AL + GR A+D+I EM KG DV TY +++G+ +
Sbjct: 408 DAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRL 467
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSY 236
+D + M +PN ++Y ++ G CR EA+++ + + P+ ++Y
Sbjct: 468 GEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITY 527
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
++++ G R G + EA V EM+ G P + L+ L + +A + ++E +
Sbjct: 528 SVIMHGLR-REGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 586
Query: 297 SKG 299
+KG
Sbjct: 587 NKG 589
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 156/357 (43%), Gaps = 60/357 (16%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDS--------GLVR---------- 49
P + TY A+V G C EV++AK+LL+ M ++ G+ R
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 50 ------YAYSDNS--YNFVMY---KEGGLEEASDLLPEML-------ELESGLVPHTLIY 91
+ +S NS Y+ +M+ +EG L EA D++ EM+ +E L+ +L
Sbjct: 512 MNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Query: 92 D-------TLIDECCTKGIGTK-----------GSLDEIDKAVAYKDEMISRGIEPTIVT 133
D ++EC KG DE+D A++ D+M + T
Sbjct: 572 DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFT 631
Query: 134 YTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMV 193
YT L++ L + GR A +++K+M KG+ TY T++ Y + +D + I ++M+
Sbjct: 632 YTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Query: 194 EKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYV 250
+ Q YN ++ C + EA L K+ + + D + L+ GY + G
Sbjct: 692 SR--QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGY-LKKGVP 748
Query: 251 KEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKK 307
A++V M + P + L L + +V++A++L+ +V +G +P K
Sbjct: 749 LSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQSLK 805
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 134/316 (42%), Gaps = 23/316 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P TY L+ H ++A LK+ + D + YS + + KE
Sbjct: 378 GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRID----KLGYS--AIVHALCKE 431
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G + EA DL+ EML + P + Y +++ C G E+DKA M +
Sbjct: 432 GRMSEAKDLINEMLS-KGHCPPDVVTYTAVVNGFCRLG--------EVDKAKKLLQVMHT 482
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G +P V+YT L+ + G+S A +M+ +E + TY+ +M G + +
Sbjct: 483 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSE 542
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ EMV K P + N ++ C R EA+K ++ G + +++ +I
Sbjct: 543 ACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIH 602
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
G+ + + A V D+M TY L+ L + +A EL+K+M+ KGI
Sbjct: 603 GFC-QNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI- 660
Query: 302 TPDDKKYLILTDMVHR 317
D + ++HR
Sbjct: 661 ---DPTPVTYRTVIHR 673
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 5/196 (2%)
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M G+EP ++ I+ R A ++ MQ G+ +V TYN ++ GY
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKM-KTSGIKPDHLSYN 237
++ I + ++M K P+ ++Y T+M C R E + L KM K G+ PD ++YN
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI + + + EA + + G Y A++ L + +A++L+ EM+S
Sbjct: 388 TLIHMLT-KHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLS 446
Query: 298 KGICTPDDKKYLILTD 313
KG C PD Y + +
Sbjct: 447 KGHCPPDVVTYTAVVN 462
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 123/263 (46%), Gaps = 16/263 (6%)
Query: 42 MSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTK 101
M G+ R + + + G L +A +L M +G+ P+ LI +T ID
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQR--AGVEPNLLICNTTID----- 285
Query: 102 GIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG 161
+ + + ++KA+ + + M GI P +VTY +I ++ R A +++++M KG
Sbjct: 286 -VFVRA--NRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKG 342
Query: 162 LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMV-EKRIQPNLLTYNT---MMLGHCRCSEA 217
D +Y T+M K K I + +M E + P+ +TYNT M+ H EA
Sbjct: 343 CLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEA 402
Query: 218 QKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNG-IDPTFTTYDALI 276
+ G + D L Y+ ++ + G + EA + +EML G P TY A++
Sbjct: 403 LWFLKDAQEKGFRIDKLGYSAIVHALC-KEGRMSEAKDLINEMLSKGHCPPDVVTYTAVV 461
Query: 277 LGLRINHEVEQAEELLKEMVSKG 299
G EV++A++LL+ M + G
Sbjct: 462 NGFCRLGEVDKAKKLLQVMHTHG 484
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 132 VTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDE 191
+ Y ++E L + G+ ++ M+ +G+ ++ +M Y++ + + +
Sbjct: 208 MVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTL 267
Query: 192 MVEKRIQPNLLTYNT---MMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYS--YR 246
M ++PNLL NT + + R +A + ++M+ GI P+ ++YN +I GY +R
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 247 GGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDK 306
V+EA + ++M G P +Y ++ L + + +L+K+M + PD
Sbjct: 328 ---VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQV 384
Query: 307 KYLILTDMV 315
Y L M+
Sbjct: 385 TYNTLIHML 393
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 165 DVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLF 221
D Y +++ +K K + M + I ++ +M+ + R + A K+
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 222 DKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRI 281
M+ +G++P+ L N I + R +++A R + M GI P TY+ +I G
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVF-VRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCD 324
Query: 282 NHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
H VE+A ELL++M SKG C PD Y + + +E+
Sbjct: 325 LHRVEEAIELLEDMHSKG-CLPDKVSYYTIMGYLCKEK 361
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 30/304 (9%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSY--NFVMY 62
GF PT+ + A + V+ A +EM+R S N Y N VM
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK-----------ISPNPYTLNMVMS 246
Query: 63 ---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ G L++ +LL +M L G + Y+TLI C KG+ + A+ K
Sbjct: 247 GYCRSGKLDKGIELLQDMERL--GFRATDVSYNTLIAGHCEKGL--------LSSALKLK 296
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+ M G++P +VT+ LI + A + EM+ + + TYNTL++GY++
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSY 236
+ Y++MV IQ ++LTYN ++ G C+ ++ +K ++ + P+ ++
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTF 416
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
+ LI G R F + M+++G P T++ L+ N + + A ++L+EMV
Sbjct: 417 SALIMGQCVRKN-ADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
Query: 297 SKGI 300
+ I
Sbjct: 476 RRSI 479
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M G PT+ + + +L GR A +EM+ + + YT N +MSGY +
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---------------------------- 212
+D I + +M + ++YNT++ GHC
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFN 312
Query: 213 ----------RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK 262
+ EA K+F +MK + P+ ++YN LI GYS +G + + AFR ++M+
Sbjct: 313 TLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH-EMAFRFYEDMVC 371
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
NGI TY+ALI GL + +A + +KE+
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
R + T + L + + + A D +M++ G V + N MS +D
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIA 241
+ Y EM +I PN T N +M G+CR + K L M+ G + +SYN LIA
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
G+ + G + A ++++ M K+G+ P T++ LI G ++++A ++ EM + +
Sbjct: 282 GHCEK-GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV- 339
Query: 302 TPDDKKYLILTD 313
P+ Y L +
Sbjct: 340 APNTVTYNTLIN 351
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 30/304 (9%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSY--NFVMY 62
GF PT+ + A + V+ A +EM+R S N Y N VM
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK-----------ISPNPYTLNMVMS 246
Query: 63 ---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ G L++ +LL +M L G + Y+TLI C KG+ + A+ K
Sbjct: 247 GYCRSGKLDKGIELLQDMERL--GFRATDVSYNTLIAGHCEKGL--------LSSALKLK 296
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+ M G++P +VT+ LI + A + EM+ + + TYNTL++GY++
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSY 236
+ Y++MV IQ ++LTYN ++ G C+ ++ +K ++ + P+ ++
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTF 416
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
+ LI G R F + M+++G P T++ L+ N + + A ++L+EMV
Sbjct: 417 SALIMGQCVRKN-ADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
Query: 297 SKGI 300
+ I
Sbjct: 476 RRSI 479
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M G PT+ + + +L GR A +EM+ + + YT N +MSGY +
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---------------------------- 212
+D I + +M + ++YNT++ GHC
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFN 312
Query: 213 ----------RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK 262
+ EA K+F +MK + P+ ++YN LI GYS +G + + AFR ++M+
Sbjct: 313 TLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH-EMAFRFYEDMVC 371
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
NGI TY+ALI GL + +A + +KE+
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
R + T + L + + + A D +M++ G V + N MS +D
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIA 241
+ Y EM +I PN T N +M G+CR + K L M+ G + +SYN LIA
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
G+ + G + A ++++ M K+G+ P T++ LI G ++++A ++ EM + +
Sbjct: 282 GHCEK-GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV- 339
Query: 302 TPDDKKYLILTD 313
P+ Y L +
Sbjct: 340 APNTVTYNTLIN 351
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 127/257 (49%), Gaps = 23/257 (8%)
Query: 56 SYNFVMYKEGGLEEASDLLPEMLELESGLVPH----TLIYDTLIDECCTKGIGTKGSLDE 111
S+ + Y + G+ S ++ E + GL PH T++ ++L+ + T
Sbjct: 137 SWLMIYYAKAGMINDSIVVFEQIR-SCGLKPHLQACTVLLNSLVKQRLT----------- 184
Query: 112 IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
D +M+ G+ I Y +L+ A + G AE ++ EM+EKG+ D++TYNT
Sbjct: 185 -DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNT 243
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSG 228
L+S Y K + + D M + PN++TYN+ + G R EA +LF ++K
Sbjct: 244 LISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DD 302
Query: 229 IKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
+ +H++Y LI GY R + EA R+R+ M G P TY++++ L + + +A
Sbjct: 303 VTANHVTYTTLIDGYC-RMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Query: 289 EELLKEMVSKGICTPDD 305
LL EM K I PD+
Sbjct: 362 NRLLTEMSGKKI-EPDN 377
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 44/332 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSD---------------- 44
M+K+G I Y LV C + E+A++LL EM+ D
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 45 -------------SGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIY 91
SG+ + NS+ +EG + EA+ L E ++ + + + Y
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE---IKDDVTANHVTY 310
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
TLID C +++ID+A+ ++ M SRG P +VTY ++ L E GR A
Sbjct: 311 TTLIDGYC--------RMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREAN 362
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
++ EM K ++ D T NTL++ Y K + + + + + +M+E ++ ++ +Y ++ G
Sbjct: 363 RLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGF 422
Query: 212 CRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
C+ E A++ M G P + +Y+ L+ G+ Y E ++ +E K G+
Sbjct: 423 CKVLELENAKEELFSMIEKGFSPGYATYSWLVDGF-YNQNKQDEITKLLEEFEKRGLCAD 481
Query: 269 FTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
Y LI + +V+ A+ L + M KG+
Sbjct: 482 VALYRGLIRRICKLEQVDYAKVLFESMEKKGL 513
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 51/286 (17%)
Query: 57 YNFVMY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEID 113
YN +++ K G E+A LL EM E G+ P Y+TLI C K + +
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEE--KGVFPDIFTYNTLISVYCKKSMHFE------- 256
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM 173
A++ +D M G+ P IVTY I GR A + +E+++ + + TY TL+
Sbjct: 257 -ALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLI 314
Query: 174 SGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIK 230
GY + ID + + + M + P ++TYN+++ C R EA +L +M I+
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 231 PDHLSYNLLIAGY--------------------------SYRG---GYVK--EAFRVRDE 259
PD+++ N LI Y SY+ G+ K E ++E
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEE 434
Query: 260 ---MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICT 302
M++ G P + TY L+ G ++ ++ +LL+E +G+C
Sbjct: 435 LFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCA 480
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 19/243 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF P + TY +++ C + +A LL EM D+ + N+ K
Sbjct: 337 GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDN------ITCNTLINAYCKI 390
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
+ A + +M+E SGL Y LI C + E++ A MI
Sbjct: 391 EDMVSAVKVKKKMIE--SGLKLDMYSYKALIHGFC--------KVLELENAKEELFSMIE 440
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+G P TY+ L++ + + +++E +++GL DV Y L+ K + +D
Sbjct: 441 KGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDY 500
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+++ M +K + + + + TM + R +EA LFD M + + Y + A
Sbjct: 501 AKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISA 560
Query: 242 GYS 244
Y+
Sbjct: 561 SYA 563
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 39 ASDMSDSGLVRYAYSDNSYNFVM----YKEGGLEEASDLLPEMLELESGLVPHTLIYDTL 94
A ++ D VR D+S +M +++G ++EA L M++ G +P +
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ--RGFIPDNATCTLI 258
Query: 95 IDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMI 154
+ C G+ +++A+ Y +MI G +P ++ +T LI+ L + G A +M+
Sbjct: 259 LTALCENGL--------VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEML 310
Query: 155 KEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRI-QPNLLTYNTMMLGHC- 212
+EM G K +VYT+ L+ G K + + ++ ++V +PN+ TY +M+ G+C
Sbjct: 311 EEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCK 370
Query: 213 --RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFT 270
+ + A+ LF +MK G+ P+ +Y LI G+ G + + A+ + + M G P
Sbjct: 371 EDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR-AYELMNLMGDEGFMPNIY 429
Query: 271 TYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
TY+A I L +A ELL + S G+ D Y IL
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGL-EADGVTYTIL 469
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 144/337 (42%), Gaps = 44/337 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSD--------SGLVRYAY 52
M+ +GF P + + +L+ G C ++QA E+L+EM R + GL + +
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337
Query: 53 SDNSYNFVM----------------------YKEGGLEEASDLLPEMLELESGLVPHTLI 90
++ ++ + KE L A L M E GL P+
Sbjct: 338 TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM--KEQGLFPNVNT 395
Query: 91 YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
Y TLI+ C G +A + M G P I TY I++L + R+ A
Sbjct: 396 YTTLINGHCKAG--------SFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
+++ + GL+ D TY L+ K I+ + + M + + ++ N ++
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 211 HCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
CR E+++LF + + G+ P +Y +I+ Y + G + A + M ++G P
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYC-KEGDIDLALKYFHNMKRHGCVP 566
Query: 268 TFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
TY +LI GL V++A +L + M+ +G+ P+
Sbjct: 567 DSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 603
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 139/303 (45%), Gaps = 27/303 (8%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSG---LVRYAYSDNSYNFVM 61
G P ++YK +V+GC ++++A L M + + D+ L+ A +N
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCEN------ 265
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
G + A +M++L G P+ + + +LID C KG I +A +E
Sbjct: 266 ---GLVNRAIWYFRKMIDL--GFKPNLINFTSLIDGLCKKG--------SIKQAFEMLEE 312
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDM-IKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+ G +P + T+T LI+ L + G + A + +K ++ K +V+TY +++ GY K
Sbjct: 313 MVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKED 372
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYN 237
++ ++ M E+ + PN+ TY T++ GHC+ A +L + M G P+ +YN
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
I + EA+ + ++ G++ TY LI +++ QA M
Sbjct: 433 AAIDSLC-KKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNK 491
Query: 298 KGI 300
G
Sbjct: 492 TGF 494
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G P + TY L+ G C +A EL+ + M D G + Y+ N+
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM------NLMGDEGFMPNIYTYNAAIDS 437
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K+ EA +LL + GL + Y LI E C + ++I++A+A+
Sbjct: 438 LCKKSRAPEAYELLNK--AFSCGLEADGVTYTILIQEQCKQ--------NDINQALAFFC 487
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M G E + +LI A + +E + + + GL TY +++S Y K
Sbjct: 488 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
ID + + M P+ TY +++ G C+ S EA KL++ M G+ P ++
Sbjct: 548 DIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRV 607
Query: 238 LLIAGYSYRG 247
L Y R
Sbjct: 608 TLAYEYCKRN 617
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 137 LIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKR 196
++ E+GR A M+ +MQ +GL T N ++ + I+ ++DEM +
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 197 IQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEA 253
+ P+ +Y M++G R EA + M G PD+ + L++ G V A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC-ENGLVNRA 271
Query: 254 FRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+M+ G P + +LI GL ++QA E+L+EMV G
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF + Y+ +V C + E A+ + ++ + G V ++ S +
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKI------GFVLDSHIGTSLLLGFCRG 243
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
L +A + +++ E P+++ Y LI C G +++A KD+M
Sbjct: 244 LNLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVG--------RLEEAFGLKDQMGE 294
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+G +P+ TYT+LI+AL + G A ++ EM +G K +V+TY L+ G + I+
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
G+ +MV+ RI P+++TYN ++ G+C R A +L M+ KP+ ++N L+
Sbjct: 355 ANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELME 414
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
G R G +A + ML NG+ P +Y+ LI GL + A +LL M
Sbjct: 415 GLC-RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 145/319 (45%), Gaps = 29/319 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEM-KRASDMSDSGLVRYAYSDNSYNF 59
M+K P++ TY AL+ G C V A ELL M KRA + VR ++N
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN----VR------TFNE 411
Query: 60 VM---YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV 116
+M + G +A LL ML+ +GL P + Y+ LID C +G ++ A
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLD--NGLSPDIVSYNVLIDGLCREG--------HMNTAY 461
Query: 117 AYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
M IEP +T+T +I A + G++ A + M KG+ LD T TL+ G
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521
Query: 177 AKCKYIDAHIGIYDEMVEKRIQPNLLTYNT---MMLGHCRCSEAQKLFDKMKTSGIKPDH 233
K + I + +V+ RI + N M+ C+ E + K+ G+ P
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSV 581
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
++Y L+ G R G + +FR+ + M +G P Y +I GL VE+AE+LL
Sbjct: 582 VTYTTLVDGL-IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLS 640
Query: 294 EMVSKGICTPDDKKYLILT 312
M G+ +P+ Y ++
Sbjct: 641 AMQDSGV-SPNHVTYTVMV 658
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 139/351 (39%), Gaps = 64/351 (18%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV---- 60
G P+ TY L+ C +++A L EM + N + +
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM-----------IPRGCKPNVHTYTVLID 344
Query: 61 -MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ ++G +EEA+ + +M++ + P + Y+ LI+ C G + A
Sbjct: 345 GLCRDGKIEEANGVCRKMVK--DRIFPSVITYNALINGYCKDG--------RVVPAFELL 394
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
M R +P + T+ L+E L VG+ + A ++K M + GL D+ +YN L+ G +
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSY 236
+++ + M I+P+ LT+ ++ C+ + A M GI D ++
Sbjct: 455 GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG 514
Query: 237 NLLIAGYS----------------------------------YRGGYVKEAFRVRDEMLK 262
LI G +G VKE + ++ K
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINK 574
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
G+ P+ TY L+ GL + ++ + +L+ M G C P+ Y I+ +
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG-CLPNVYPYTIIIN 624
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 6/189 (3%)
Query: 134 YTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMV 193
Y+ L+ +L ++ + A + M+ G + + Y T+++ K Y +A +++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 194 EKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKM-KTSGIKPDHLSYNLLIAGYSYRGGY 249
+ + +++LG CR +A K+FD M K P+ +SY++LI G G
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLC-EVGR 281
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYL 309
++EAF ++D+M + G P+ TY LI L +++A L EM+ +G C P+ Y
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG-CKPNVHTYT 340
Query: 310 ILTDMVHRE 318
+L D + R+
Sbjct: 341 VLIDGLCRD 349
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 148/299 (49%), Gaps = 27/299 (9%)
Query: 20 CCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV---MYKEGGLEEASDLLPE 76
C + V QA E+ KEM + + +DS + YN + + G + A + +
Sbjct: 275 CFKNGNVVQALEVWKEMSQKNVPADSVV---------YNVIIRGLCSSGNMVAAYGFMCD 325
Query: 77 MLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTL 136
M++ G+ P Y+TLI C +G + D+A M + G+ P ++Y +
Sbjct: 326 MVK--RGVNPDVFTYNTLISALCKEG--------KFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 137 LIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKR 196
+I+ L G A + + M + L +V +N ++ GY + + + + + M+
Sbjct: 376 IIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG 435
Query: 197 IQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEA 253
++PN+ T N ++ G+ R +A + ++M+++ I PD +YNLL+ G + G+++ A
Sbjct: 436 VKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL-GAACTLGHLRLA 494
Query: 254 FRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILT 312
F++ DEML+ G P TY L+ GL +++AE LL + + GI T D +LIL
Sbjct: 495 FQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI-TIDHVPFLILA 552
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 142/347 (40%), Gaps = 54/347 (15%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M ++G P +Y L+ G C+ + V++A L M + G+ + N
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKY------GIRPNRVTCNIIVHA 235
Query: 61 MYKEGGL-EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ ++G + LL E+L+ P ++ T++ + C K + +A+
Sbjct: 236 LCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKN-------GNVVQALEVW 288
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
EM + + V Y ++I L G A + +M ++G+ DV+TYNTL+S K
Sbjct: 289 KEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKE 348
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC--------------------------- 212
D ++ M + P+ ++Y ++ G C
Sbjct: 349 GKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLW 408
Query: 213 -----------RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML 261
S A + + M + G+KP+ + N LI GY +GG + +A+ V++EM
Sbjct: 409 NVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY-VKGGRLIDAWWVKNEMR 467
Query: 262 KNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
I P TTY+ L+ + A +L EM+ +G C PD Y
Sbjct: 468 STKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG-CQPDIITY 513
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 147/356 (41%), Gaps = 66/356 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMK----RASDMSDSGLVRYAYSDNS 56
M+ G P + T+ L+ G C +E+A L++EM+ + +S + L++ S N+
Sbjct: 147 MIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNN 206
Query: 57 YNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGI---GTKGSLDEID 113
+ +Y + + G+ P+ + + ++ C KG+ K L+EI
Sbjct: 207 VDKALYLFNTMNKY------------GIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL 254
Query: 114 KAVAYKDEMISRGIEPT-IVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTL 172
+ S+ P IV T+L+++ F+ G A ++ KEM +K + D YN +
Sbjct: 255 DS--------SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 173 MSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGI 229
+ G + A G +MV++ + P++ TYNT++ C + EA L M+ G+
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 230 KPDHLSYNLLIAGYSYRG----------------------------------GYVKEAFR 255
PD +SY ++I G G G A
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALS 426
Query: 256 VRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
V + ML G+ P T +ALI G + A + EM S I PD Y +L
Sbjct: 427 VLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKI-HPDTTTYNLL 481
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 117/250 (46%), Gaps = 25/250 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K G +P + TY L+ C + ++A +L M+ D SY +
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQI---------SYKVI 376
Query: 61 MYK---EGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ G + A++ + L+S L+P L+++ +ID G G G + A++
Sbjct: 377 IQGLCIHGDVNRANEF--LLSMLKSSLLPEVLLWNVVID-----GYGRYG---DTSSALS 426
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
+ M+S G++P + T LI + GR A + EM+ + D TYN L+
Sbjct: 427 VLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAAC 486
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHL 234
++ +YDEM+ + QP+++TY ++ G C R +A+ L +++ +GI DH+
Sbjct: 487 TLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHV 546
Query: 235 SYNLLIAGYS 244
+ +L Y+
Sbjct: 547 PFLILAKKYT 556
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 118/264 (44%), Gaps = 52/264 (19%)
Query: 90 IYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWG 149
I+ +++ + C +G ++D A+ + +MI G+ P ++T+ L+ L + G
Sbjct: 123 IHSSIMRDLCLQG--------KLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEK 174
Query: 150 AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMML 209
A+ +++EM+E G + +YNTL+ G +D + +++ M + I+PN +T N ++
Sbjct: 175 ADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVH 234
Query: 210 GHCR-----------------------------CS-------------EAQKLFDKMKTS 227
C+ C+ +A +++ +M
Sbjct: 235 ALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQK 294
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
+ D + YN++I G G V A+ +M+K G++P TY+ LI L + ++
Sbjct: 295 NVPADSVVYNVIIRGLCSSGNMV-AAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353
Query: 288 AEELLKEMVSKGICTPDDKKYLIL 311
A +L M + G+ PD Y ++
Sbjct: 354 ACDLHGTMQNGGV-APDQISYKVI 376
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 81/203 (39%), Gaps = 39/203 (19%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMK-------------------RASDMSDS 45
G P +YK ++ G C H +V +A E L M R D S +
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSA 424
Query: 46 ----------GLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLI 95
G+ Y++N+ K G L +A + EM + + P T Y+ L+
Sbjct: 425 LSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS--TKIHPDTTTYNLLL 482
Query: 96 DECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIK 155
CT G + A DEM+ RG +P I+TYT L+ L GR AE ++
Sbjct: 483 GAACTLG--------HLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLS 534
Query: 156 EMQEKGLKLDVYTYNTLMSGYAK 178
+Q G+ +D + L Y +
Sbjct: 535 RIQATGITIDHVPFLILAKKYTR 557
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 28/295 (9%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKR----ASDMSDSGLVRYAYSDNSYNFVMYK 63
P + TY L+ C + E A L E + +++S + L++ Y+
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI---- 398
Query: 64 EGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMI 123
AS LL +M E G P + Y LI G+ G +D+ AV K ++I
Sbjct: 399 ------ASKLLLQMAE--RGCKPDIVTYGILI-----HGLVVSGHMDD---AVNMKVKLI 442
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
RG+ P Y +L+ L + GR A+ + EM ++ + D Y Y TL+ G+ + D
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLI 240
++ VEK ++ +++ +N M+ G CR EA ++M + PD +Y+ +I
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
GY + + A ++ M KN P TY +LI G + + AEE KEM
Sbjct: 563 DGYVKQQD-MATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 20/299 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P I Y ++ G C ++E A + KE+K M L + N + KE
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPT--LETFGTMINGF----CKE 288
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G + LL E+ E GL + +ID G ++D A + +I+
Sbjct: 289 GDFVASDRLLSEVKE--RGLRVSVWFLNNIIDAKYRHGY-------KVDPAESI-GWIIA 338
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+P + TY +LI L + G+ A + E +KGL + +Y L+ Y K K D
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ +M E+ +P+++TY ++ G +A + K+ G+ PD YN+L++
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G G ++ A + EML I P Y LI G + + ++A ++ V KG+
Sbjct: 459 GLCKTGRFL-PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 130/334 (38%), Gaps = 58/334 (17%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDS--------GLVRYAYSDNS 56
G P Y L+ G C AK L EM + + D+ G +R D +
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 57 YN-FVMYKEGGLEE-------------ASDLLPEMLEL-----ESGLVPHTLIYDTLIDE 97
F + E G++ S +L E L E LVP Y T+ID
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID- 563
Query: 98 CCTKGIGTKGSLDEIDKAVAYK--DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIK 155
G + + D A A K M +P +VTYT LI G AE+ K
Sbjct: 564 ---------GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK 614
Query: 156 EMQEKGLKLDVYTYNTLMSGYAK-CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---- 210
EMQ + L +V TY TL+ AK ++ + ++ M+ + PN +T+N ++ G
Sbjct: 615 EMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Query: 211 -------------HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVR 257
H + S + F +MK+ G +YN + G VK A +
Sbjct: 675 TSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVH-GMVKTACMFQ 733
Query: 258 DEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
D+M+K G P ++ A++ G + +Q +
Sbjct: 734 DKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 40/230 (17%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
DEM RG + +L++ + G+ +I+ KG ++ YNT++ GY K
Sbjct: 194 DEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKL 253
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGI------- 229
I+ ++ E+ K P L T+ TM+ G C+ + + +L ++K G+
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 230 ----------------------------KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML 261
KPD +YN+LI + G + A DE
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLC-KEGKKEVAVGFLDEAS 372
Query: 262 KNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
K G+ P +Y LI + E + A +LL +M +G C PD Y IL
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG-CKPDIVTYGIL 421
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 153/313 (48%), Gaps = 23/313 (7%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEG 65
P T LV C ++E+A ++ +M+ D +V + +Y + G
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD--VVTFNTLAKAYARI----G 509
Query: 66 GLEEASDLL-PEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
A D++ P ML + + P+ T+++ C +G ++++A+ + M
Sbjct: 510 STCTAEDMIIPRMLH--NKVKPNVRTCGTIVNGYCEEG--------KMEEALRFFYRMKE 559
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G+ P + + LI+ + G +++ M+E G+K DV T++TLM+ ++ +
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIA 241
IY +M+E I P++ ++ + G+ R E A+++ ++M+ G++P+ + Y +I+
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIIS 679
Query: 242 GYSYRGGYVKEAFRVRDEMLK-NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G+ G +K+A +V +M G+ P TTY+ LI G + +AEELLK+M K +
Sbjct: 680 GWC-SAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNV 738
Query: 301 CTPDDKKYLILTD 313
P K ++ D
Sbjct: 739 -VPTRKTMQLIAD 750
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 147/302 (48%), Gaps = 20/302 (6%)
Query: 3 KVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY 62
K G P + A++ ++QA ++ ++MK +SG A + N+
Sbjct: 382 KNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK------ESGCKPTASTFNTLIKGYG 435
Query: 63 KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEM 122
K G LEE+S LL ML E L P+ + L+ C + +I++A +M
Sbjct: 436 KIGKLEESSRLLDMMLRDEM-LQPNDRTCNILVQAWCNQ--------RKIEEAWNIVYKM 486
Query: 123 ISRGIEPTIVTYTLLIEALFEVGRSWGAEDM-IKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
S G++P +VT+ L +A +G + AEDM I M +K +V T T+++GY +
Sbjct: 487 QSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGK 546
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNL 238
++ + + M E + PNL +N+++ G ++ ++ D M+ G+KPD ++++
Sbjct: 547 MEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFST 606
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
L+ +S G +K + +ML+ GIDP + L G E E+AE++L +M
Sbjct: 607 LMNAWSSVGD-MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKF 665
Query: 299 GI 300
G+
Sbjct: 666 GV 667
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 94/178 (52%), Gaps = 6/178 (3%)
Query: 131 IVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD 190
+ + T L+ L E GR A + + E+G K + TY TL++ + K+ + + +
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 191 EMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRG 247
++ + ++P+ + +N ++ +A K+F+KMK SG KP ++N LI GY +
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG-KI 437
Query: 248 GYVKEAFRVRDEMLKNG-IDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
G ++E+ R+ D ML++ + P T + L+ ++E+A ++ +M S G+ PD
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGV-KPD 494
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 86/160 (53%), Gaps = 5/160 (3%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+ +I G +P+++TYT L+ AL +I ++++ GLK D +N +++ ++
Sbjct: 343 NTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSES 402
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKM-KTSGIKPDHLS 235
+D + I+++M E +P T+NT++ G+ + E+ +L D M + ++P+ +
Sbjct: 403 GNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRT 462
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDAL 275
N+L+ + + ++EA+ + +M G+ P T++ L
Sbjct: 463 CNILVQAWCNQ-RKIEEAWNIVYKMQSYGVKPDVVTFNTL 501
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 85/159 (53%), Gaps = 6/159 (3%)
Query: 165 DVYTYNTLMSGY-AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFD- 222
DV + LM+G + + +AH I++ ++E+ +P+L+TY T++ R L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAH-SIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSL 376
Query: 223 --KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLR 280
K++ +G+KPD + +N +I S G + +A ++ ++M ++G PT +T++ LI G
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASS-ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 281 INHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
++E++ LL M+ + P+D+ IL +R
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQR 474
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVR--YAYSDNSYN 58
M + G P + T+ L+ + ++++ +E+ +DM + G+ +A+S +
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIY------TDMLEGGIDPDIHAFSILAKG 645
Query: 59 FVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV-A 117
+ + G E+A +L +M + G+ P+ +IY +I C+ G E+ KA+
Sbjct: 646 YA--RAGEPEKAEQILNQMRKF--GVRPNVVIYTQIISGWCSAG--------EMKKAMQV 693
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
YK G+ P + TY LI E + W AE+++K+M+ K + T + G+
Sbjct: 694 YKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 122/258 (47%), Gaps = 22/258 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G PT+ T+ L+ G ++E+A E+L EM L + ++++Y +
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT---------LAGVSANEHTYTKI 665
Query: 61 MYKEGGLEEASDLLPEMLELES-GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
M + + L++ GL Y+ L+ CC G + A+A
Sbjct: 666 MQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG--------RMQSALAVT 717
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
EM +R I Y +LI+ G W A D+I++M+++G+K D++TY + +S +K
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKL---FDKMKTSGIKPDHLSY 236
++ +EM ++PN+ TY T++ G R S +K +++MK GIKPD Y
Sbjct: 778 GDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Query: 237 NLLIAGYSYRGGYVKEAF 254
+ L+ R + EA+
Sbjct: 838 HCLLTSLLSRAS-IAEAY 854
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 147/324 (45%), Gaps = 28/324 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K G P + Y ++ C +++A + +KEM++ +R+ + ++ +
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQK---------LRHRPTTRTFMPI 595
Query: 61 MY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
++ K G + + ++ M G VP ++ LI+ K +++KAV
Sbjct: 596 IHGYAKSGDMRRSLEVFDMMRRC--GCVPTVHTFNGLINGLVEK--------RQMEKAVE 645
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
DEM G+ TYT +++ VG + A + +Q +GL +D++TY L+
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHL 234
K + + + + EM + I N YN ++ G R EA L +MK G+KPD
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIH 765
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
+Y I+ S + G + A + +EM G+ P TY LI G E+A +E
Sbjct: 766 TYTSFISACS-KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEE 824
Query: 295 MVSKGICTPDDKKY-LILTDMVHR 317
M + GI PD Y +LT ++ R
Sbjct: 825 MKAMGI-KPDKAVYHCLLTSLLSR 847
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 26/306 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRAS---DMSDSGLVRYAYSDNSY 57
M + G + ++ TY +V G E A E KR + S G + YA+
Sbjct: 370 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC- 428
Query: 58 NFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+E A L+ EM E G+ IY T++D G DE V
Sbjct: 429 --------NMERAEALVREMEE--EGIDAPIAIYHTMMD-------GYTMVADEKKGLVV 471
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
+K + G PT+VTY LI +VG+ A ++ + M+E+G+K ++ TY+ +++G+
Sbjct: 472 FK-RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHL 234
K K ++++MV++ ++P+++ YN ++ C A + +M+ +P
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
++ +I GY+ + G ++ + V D M + G PT T++ LI GL ++E+A E+L E
Sbjct: 591 TFMPIIHGYA-KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 295 MVSKGI 300
M G+
Sbjct: 650 MTLAGV 655
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 21/307 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF PT+ TY L+ ++ +A E+ + MK + L Y+ N FV K+
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMK--EEGVKHNLKTYSMMIN--GFVKLKD 534
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
A + +M++ G+ P ++Y+ +I C G+G +D+A+ EM
Sbjct: 535 WA--NAFAVFEDMVK--EGMKPDVILYNNIISAFC--GMGN------MDRAIQTVKEMQK 582
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
PT T+ +I + G + ++ M+ G V+T+N L++G + + ++
Sbjct: 583 LRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEK 642
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFD---KMKTSGIKPDHLSYNLLIA 241
+ I DEM + N TY +M G+ + K F+ +++ G+ D +Y L+
Sbjct: 643 AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
+ G ++ A V EM I Y+ LI G +V +A +L+++M +G+
Sbjct: 703 A-CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV- 760
Query: 302 TPDDKKY 308
PD Y
Sbjct: 761 KPDIHTY 767
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 63 KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEM 122
+ G + A + M G+ P + IY +LI +G ++D+A++ +M
Sbjct: 321 RRGDMHRARETFERMRA--RGITPTSRIYTSLIH---AYAVGR-----DMDEALSCVRKM 370
Query: 123 ISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYI 182
GIE ++VTY++++ + G + A+ E + L+ Y ++ + + +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 183 DAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLL 239
+ + EM E+ I + Y+TMM G+ ++ +K +F ++K G P ++Y L
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 240 IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
I Y+ + G + +A V M + G+ TY +I G + A + ++MV +G
Sbjct: 491 INLYT-KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 300 ICTPD 304
+ PD
Sbjct: 550 M-KPD 553
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 136/293 (46%), Gaps = 22/293 (7%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASD-MSDSGLVRYAYSDNSYNFVMYKEGG 66
PT +TY +++L + E+ E+ EM D D+ + Y+ +SY K G
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDT--ITYSALISSYE----KLGR 248
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
+ A L EM ++ + P IY TL +G + +++KA+ +EM G
Sbjct: 249 NDSAIRLFDEM--KDNCMQPTEKIYTTL--------LGIYFKVGKVEKALDLFEEMKRAG 298
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
PT+ TYT LI+ L + GR A K+M GL DV N LM+ K ++
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLG----HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAG 242
++ EM R P +++YNT++ SE FDKMK + P +Y++LI G
Sbjct: 359 NVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDG 418
Query: 243 YSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y + V++A + +EM + G P Y +LI L E A EL KE+
Sbjct: 419 YC-KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 129/283 (45%), Gaps = 22/283 (7%)
Query: 31 ELLKEMKRASDMSDSGLVRYAY-------SDNSYNFV---MYKEGGLEEASDLLPEMLEL 80
EL+K + RA +S + V Y + ++YN V + +EG E+ ++ EM
Sbjct: 167 ELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN- 225
Query: 81 ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEA 140
E P T+ Y LI + L D A+ DEM ++PT YT L+
Sbjct: 226 EGDCFPDTITYSALI--------SSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 141 LFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPN 200
F+VG+ A D+ +EM+ G VYTY L+ G K +D G Y +M+ + P+
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 201 LLTYNTMM--LGHC-RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVR 257
++ N +M LG R E +F +M P +SYN +I +V E
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWF 397
Query: 258 DEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
D+M + + P+ TY LI G + VE+A LL+EM KG
Sbjct: 398 DKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF 440
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 143/314 (45%), Gaps = 20/314 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G PT+ TY L+ G V++A K+M R GL N+ +
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLR------DGLTPDVVFLNNLMNI 347
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K G +EE +++ EM P + Y+T+I +K + E+ ++ D
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRC--TPTVVSYNTVIKAL----FESKAHVSEVS---SWFD 398
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M + + P+ TY++LI+ + R A +++EM EKG Y +L++ K K
Sbjct: 399 KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMM--LGHC-RCSEAQKLFDKMKTSGIKPDHLSYN 237
+A ++ E+ E + Y M+ G C + SEA LF++MK G PD +YN
Sbjct: 459 RYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
L++G + G + EA + +M +NG +++ ++ G +A E+ + +
Sbjct: 519 ALMSGM-VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKH 577
Query: 298 KGICTPDDKKYLIL 311
GI PD Y L
Sbjct: 578 SGI-KPDGVTYNTL 590
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 19/236 (8%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P+ TY L+ G C + VE+A LL+EM + G + S + K
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEM------DEKGFPPCPAAYCSLINALGKAKRY 460
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
E A++L E+ E + + +Y +I K G G L E AV +EM ++G
Sbjct: 461 EAANELFKELKENFGNV--SSRVYAVMI-----KHFGKCGKLSE---AVDLFNEMKNQGS 510
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
P + Y L+ + + G A ++++M+E G + D+ ++N +++G+A+ I
Sbjct: 511 GPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIE 570
Query: 188 IYDEMVEKRIQPNLLTYNTMM--LGHC-RCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
+++ + I+P+ +TYNT++ H EA ++ +MK G + D ++Y+ ++
Sbjct: 571 MFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 35/199 (17%)
Query: 107 GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKL-D 165
G + KA++ + R +PT TY +I L + G+ ++ EM +G D
Sbjct: 173 GRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPD 232
Query: 166 VYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMK 225
TY+ L+S Y K LG R A +LFD+MK
Sbjct: 233 TITYSALISSYEK------------------------------LG--RNDSAIRLFDEMK 260
Query: 226 TSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEV 285
+ ++P Y L+ Y ++ G V++A + +EM + G PT TY LI GL V
Sbjct: 261 DNCMQPTEKIYTTLLGIY-FKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 286 EQAEELLKEMVSKGICTPD 304
++A K+M+ G+ TPD
Sbjct: 320 DEAYGFYKDMLRDGL-TPD 337
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 142/305 (46%), Gaps = 26/305 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ GF T T+ L+ C +QA +++ MK S Y +SYN +
Sbjct: 175 MVQDGFPTTARTFNLLICSCGEAGLAKQA--VVQFMK-------SKTFNYRPFKHSYNAI 225
Query: 61 MYKEGGLEEASDLLPEML---ELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ G+++ L E + LE G P L Y+ L+ T L ++D+
Sbjct: 226 LNSLLGVKQYK--LIEWVYKQMLEDGFSPDVLTYNILL--------WTNYRLGKMDRFDR 275
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
DEM G P TY +L+ L + + A + M+E G+ V Y TL+ G +
Sbjct: 276 LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHL 234
+ ++A DEMV+ +P+++ Y M+ G+ E A+++F +M G P+
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
+YN +I G G + +EA + EM G +P F Y L+ LR ++ +A ++++E
Sbjct: 396 TYNSMIRGLCMAGEF-REACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRE 454
Query: 295 MVSKG 299
MV KG
Sbjct: 455 MVKKG 459
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 19/257 (7%)
Query: 50 YAYSDNSYNFVM--YKEGGLEEA-SDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTK 106
+ ++ NSY+ +M + E G +A L+ EM++ G ++ LI C G+ +
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQ--DGFPTTARTFNLLICSCGEAGLAKQ 202
Query: 107 GSLDEI-DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLD 165
+ + K Y+ P +Y ++ +L V + E + K+M E G D
Sbjct: 203 AVVQFMKSKTFNYR---------PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPD 253
Query: 166 VYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM--LGH-CRCSEAQKLFD 222
V TYN L+ + +D ++DEM P+ TYN ++ LG + A +
Sbjct: 254 VLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLN 313
Query: 223 KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRIN 282
MK GI P L Y LI G S R G ++ DEM+K G P Y +I G ++
Sbjct: 314 HMKEVGIDPSVLHYTTLIDGLS-RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVS 372
Query: 283 HEVEQAEELLKEMVSKG 299
E+++A+E+ +EM KG
Sbjct: 373 GELDKAKEMFREMTVKG 389
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 5/191 (2%)
Query: 130 TIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIY 189
T+ +Y LL++ E G ++ EM + G T+N L+ + + +
Sbjct: 148 TVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQF 207
Query: 190 DEMVEKRIQPNLLTYNTMM---LGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYR 246
+ +P +YN ++ LG + + ++ +M G PD L+YN+L+ +YR
Sbjct: 208 MKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWT-NYR 266
Query: 247 GGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDK 306
G + R+ DEM ++G P TY+ L+ L ++ A L M GI P
Sbjct: 267 LGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGI-DPSVL 325
Query: 307 KYLILTDMVHR 317
Y L D + R
Sbjct: 326 HYTTLIDGLSR 336
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 25/319 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM--- 61
F+ Y ++ G C + +AKE+L+ + + RY+ S SYN ++
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK--------RYSMSCTSYNSIIDGF 600
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
K G + A + EM E +G P+ + + +LI+ C + +D A+ E
Sbjct: 601 VKVGDTDSAVETYREMSE--NGKSPNVVTFTSLINGFCKS--------NRMDLALEMTHE 650
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M S ++ + Y LI+ + A + E+ E GL +V YN+L+SG+
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNL 238
+DA I +Y +MV I +L TY TM+ G + + A L+ ++ GI PD + + +
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
L+ G S +G ++K A ++ +EM K + P Y +I G + +A L EM+ K
Sbjct: 771 LVNGLSKKGQFLK-ASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829
Query: 299 GICTPDDKKYLILTDMVHR 317
GI D L+++ V +
Sbjct: 830 GIVHDDTVFNLLVSGRVEK 848
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 141/331 (42%), Gaps = 57/331 (17%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY-- 62
G +P + V C ++ A +LL+EM+ G + S +Y V+
Sbjct: 269 GAEPDGLLFSLAVQAACKTPDLVMALDLLREMR--------GKLGVPASQETYTSVIVAF 320
Query: 63 -KEGGLEEASDLLPEMLEL---------------------------------ESGLVPHT 88
KEG +EEA ++ EM+ E GL P
Sbjct: 321 VKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDK 380
Query: 89 LIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSW 148
+++ +++ C E++KA+ + M S I P+ V +I+ +
Sbjct: 381 VMFSVMVEWFCKNM--------EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPE 432
Query: 149 GAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM 208
A ++ + E + + N + + K +DA M +K I+PN++ YN MM
Sbjct: 433 AALEIFNDSFESWIAHG-FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMM 491
Query: 209 LGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGI 265
L HCR A+ +F +M G++P++ +Y++LI G+ ++ + A+ V ++M +
Sbjct: 492 LAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF-FKNKDEQNAWDVINQMNASNF 550
Query: 266 DPTFTTYDALILGLRINHEVEQAEELLKEMV 296
+ Y+ +I GL + +A+E+L+ ++
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 22/297 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + +V C + E+E+A E MK S LV K
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG------CLKA 428
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
E A ++ + E + H + + + C +G ++D A ++ M
Sbjct: 429 ESPEAALEIFNDSFE---SWIAHGFMCNKIFLLFCKQG--------KVDAATSFLKMMEQ 477
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+GIEP +V Y ++ A + A + EM EKGL+ + +TY+ L+ G+ K K
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQN 537
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK----LFDKMKTSGIKPDHLSYNLLI 240
+ ++M + N + YNT++ G C+ + K L + +K SYN +I
Sbjct: 538 AWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSII 597
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
G+ + G A EM +NG P T+ +LI G ++ ++ A E+ EM S
Sbjct: 598 DGF-VKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKS 653
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
+++AV DEM+ GI +++ T L+ + A D+ M+E+GL D ++
Sbjct: 325 NMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFS 384
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE----AQKLFDKMKT 226
++ + K ++ I Y M RI P+ + +TM+ G C +E A ++F+
Sbjct: 385 VMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG-CLKAESPEAALEIFNDSFE 443
Query: 227 SGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVE 286
S I + + + + G V A M + GI+P Y+ ++L ++
Sbjct: 444 SWIAHGFMCNKIFL--LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMD 501
Query: 287 QAEELLKEMVSKGICTPDDKKYLILTD 313
A + EM+ KG+ P++ Y IL D
Sbjct: 502 LARSIFSEMLEKGL-EPNNFTYSILID 527
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 113 DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEK-GLKLDVYTYNT 171
++AV ++SRG EP + ++L ++A + A D+++EM+ K G+ TY +
Sbjct: 256 EEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTS 315
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSG 228
++ + K ++ + + DEMV I +++ +++ G+C+ +E A LF++M+ G
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG 375
Query: 229 IKPDHLSYNLLIAGY 243
+ PD + +++++ +
Sbjct: 376 LAPDKVMFSVMVEWF 390
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 166/347 (47%), Gaps = 44/347 (12%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M ++G +PT +TY L+ G + E++ ELL M + G V + ++N +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELL------DLMLEEGNVDVGPNIRTFNVL 194
Query: 61 MY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV- 116
+ K+ +EEA +++ +M E G+ P T+ Y+T+ KG + + ++K V
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEEC--GVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 117 ----------------------------AYKDEMISRGIEPTIVTYTLLIEALFEVGRSW 148
+ M +E +V + LI EV
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 149 GAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM 208
G ++++ M+E +K DV TY+T+M+ ++ Y++ ++ EMV+ ++P+ Y+ +
Sbjct: 313 GIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 372
Query: 209 LGHCRCSEAQKLFDKMKTSGI--KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID 266
G+ R E +K + ++T + +P+ + + +I+G+ G + +A RV ++M K G+
Sbjct: 373 KGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGS-MDDAMRVFNKMCKFGVS 431
Query: 267 PTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
P T++ L+ G + +AEE+L+ M G+ P++ +L+L +
Sbjct: 432 PNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV-KPENSTFLLLAE 477
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 157/339 (46%), Gaps = 60/339 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+ + G P++ +Y L+ + ++ E++++ DS + + N+++
Sbjct: 71 LAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDS--IFFNAVINAFS-- 126
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G +E+A L +M EL GL P T Y+TLI KG G G + +++ D
Sbjct: 127 --ESGNMEDAVQALLKMKEL--GLNPTTSTYNTLI-----KGYGIAG---KPERSSELLD 174
Query: 121 EMISRG---IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
M+ G + P I T+ +L++A + + A +++K+M+E G++ D TYNT+ + Y
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 178 -KCKYIDAHIGIYDEMV------------------------------------EKRIQPN 200
K + + A + ++MV E R++ N
Sbjct: 235 QKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEAN 294
Query: 201 LLTYNTMMLGHCRCSEA---QKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVR 257
L+ +N+++ G + ++ MK +K D ++Y+ ++ +S GY+++A +V
Sbjct: 295 LVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWS-SAGYMEKAAQVF 353
Query: 258 DEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
EM+K G+ P Y L G E ++AEELL+ ++
Sbjct: 354 KEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 392
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 104/201 (51%), Gaps = 10/201 (4%)
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGA-EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G P++++YT L+ A+ V + +G+ ++ E+++ G KLD +N +++ +++ ++
Sbjct: 75 GHRPSLISYTTLLAAM-TVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMED 133
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGH---CRCSEAQKLFDKMKTSG---IKPDHLSYNL 238
+ +M E + P TYNT++ G+ + + +L D M G + P+ ++N+
Sbjct: 134 AVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNV 193
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAE-ELLKEMVS 297
L+ + + V+EA+ V +M + G+ P TY+ + E +AE E++++MV
Sbjct: 194 LVQAWCKK-KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 298 KGICTPDDKKYLILTDMVHRE 318
K P+ + I+ RE
Sbjct: 253 KEKAKPNGRTCGIVVGGYCRE 273
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEE 69
+ TY ++ + +E+A ++ KEM +A D+ +AYS + +V KE ++
Sbjct: 330 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA----HAYSILAKGYVRAKEP--KK 383
Query: 70 ASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEP 129
A +LL E L +ES P+ +I+ T+I C+ G +D A+ ++M G+ P
Sbjct: 384 AEELL-ETLIVESR--PNVVIFTTVISGWCSNG--------SMDDAMRVFNKMCKFGVSP 432
Query: 130 TIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
I T+ L+ EV + W AE++++ M+ G+K + T+ L +
Sbjct: 433 NIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 479
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 139/300 (46%), Gaps = 56/300 (18%)
Query: 57 YNFVMYKEGGLEEASD---LLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEID 113
+N V+ G + +D L +L+ + P + L+ C S+ +
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACR---APDSSISNVH 144
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM 173
+ + + M++ G+EP VT + + +L E GR A+D++KE+ EK D YTYN L+
Sbjct: 145 RVL---NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL 201
Query: 174 SGYAKCKYIDAHIGIYDEMVEKR----IQPNLLT-------------------------- 203
KCK D H+ +Y+ + E R ++P+L++
Sbjct: 202 KHLCKCK--DLHV-VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 204 ---------YNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVK 251
YNT+M G C + SEA ++ KMK G++PD ++YN LI G S + G V+
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLS-KAGRVE 317
Query: 252 EAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
EA M+ G +P TY +L+ G+ E A LL+EM ++G C P+D Y L
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG-CAPNDCTYNTL 376
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 15/240 (6%)
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G ++EA DL+ E+ E S P T Y+ L+ C ++ + DEM
Sbjct: 173 GRVDEAKDLMKELTEKHSP--PDTYTYNFLLKHLC--------KCKDLHVVYEFVDEMRD 222
Query: 125 R-GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
++P +V++T+LI+ + A ++ ++ G K D + YNT+M G+
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
+G+Y +M E+ ++P+ +TYNT++ G R EA+ M +G +PD +Y L+
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G +G + A + +EM G P TY+ L+ GL +++ EL + M S G+
Sbjct: 343 NGMCRKGESLG-ALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 19/254 (7%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P TY L+ C ++ E + EM+ D+ + DN N L
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCN-----SKNL 246
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
EA L+ ++ +G P +Y+T++ CT G++ AV +M G+
Sbjct: 247 REAMYLVSKLGN--AGFKPDCFLYNTIMKGFCTLSKGSE--------AVGVYKKMKEEGV 296
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
EP +TY LI L + GR A +K M + G + D TY +LM+G + +
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALS 356
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
+ +EM + PN TYNT++ G C+ + +L++ MK+SG+K + Y L+
Sbjct: 357 LLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSL- 415
Query: 245 YRGGYVKEAFRVRD 258
+ G V EA+ V D
Sbjct: 416 VKSGKVAEAYEVFD 429
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 4 VGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYK 63
GF P Y ++ G CT + +A + K+MK + G+ + N+ F + K
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK------EEGVEPDQITYNTLIFGLSK 312
Query: 64 EGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMI 123
G +EEA L M++ +G P T Y +L++ C KG E A++ +EM
Sbjct: 313 AGRVEEARMYLKTMVD--AGYEPDTATYTSLMNGMCRKG--------ESLGALSLLEEME 362
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
+RG P TY L+ L + ++ + M+ G+KL+ Y TL+ K +
Sbjct: 363 ARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVA 422
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTM 207
++D V+ + + Y+T+
Sbjct: 423 EAYEVFDYAVDSKSLSDASAYSTL 446
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 147/312 (47%), Gaps = 21/312 (6%)
Query: 4 VGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYK 63
+G + + TY +L+ G +VE +L+ M S+ G+ R + S K
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLM------SERGVSRNVVTYTSLIKGYCK 308
Query: 64 EGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMI 123
+G +EEA + E+L+ E LV +Y L+D C G +I AV D MI
Sbjct: 309 KGLMEEAEHVF-ELLK-EKKLVADQHMYGVLMDGYCRTG--------QIRDAVRVHDNMI 358
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
G+ LI + G+ AE + M + LK D +TYNTL+ GY + Y+D
Sbjct: 359 EIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVD 418
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLI 240
+ + D+M +K + P ++TYN ++ G+ R + L+ M G+ D +S + L+
Sbjct: 419 EALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL 478
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
++ G EA ++ + +L G+ T + +I GL +V +A+E+L + V+
Sbjct: 479 EAL-FKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL-DNVNIFR 536
Query: 301 CTPDDKKYLILT 312
C P + Y L+
Sbjct: 537 CKPAVQTYQALS 548
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 148/336 (44%), Gaps = 44/336 (13%)
Query: 5 GFDPTITTYKALVLGCCTH---HEVEQAKELLKEMKRASDMSDSGLVRYAYSD------- 54
G + TY +L+ G C E E ELLKE K +D G++ Y
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 55 -------------------NSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLI 95
NS K G L EA + M + L P Y+TL+
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW--SLKPDHHTYNTLV 408
Query: 96 DECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIK 155
D C G +D+A+ D+M + + PT++TY +L++ +G + K
Sbjct: 409 DGYCRAGY--------VDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 156 EMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC--- 212
M ++G+ D + +TL+ K + + +++ ++ + + + +T N M+ G C
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 213 RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTY 272
+ +EA+++ D + KP +Y L GY Y+ G +KEAF V++ M + GI PT Y
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGY-YKVGNLKEAFAVKEYMERKGIFPTIEMY 579
Query: 273 DALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
+ LI G + + +L+ E+ ++G+ TP Y
Sbjct: 580 NTLISGAFKYRHLNKVADLVIELRARGL-TPTVATY 614
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 156/355 (43%), Gaps = 60/355 (16%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+L G T ++ G C +V +AKE+L + ++ Y S+ +
Sbjct: 497 VLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV----NIFRCKPAVQTYQALSHGY- 551
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
YK G L+EA + E +E G+ P +Y+TLI G L+++ V
Sbjct: 552 -YKVGNLKEAFAV-KEYME-RKGIFPTIEMYNTLIS-----GAFKYRHLNKVADLVI--- 600
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYT------------ 168
E+ +RG+ PT+ TY LI +G A EM EKG+ L+V
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660
Query: 169 --------------YNTLMSGYAKCK-YIDAHI-----------GIYDEMVEKRIQPNLL 202
++ L+ GY K +++A + + +K + PN +
Sbjct: 661 KIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNI 720
Query: 203 TYNTMMLGHCRCS---EAQKLF-DKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRD 258
YN + G C+ +A+KLF D + + PD +Y +LI G + G + +AF +RD
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGD-INKAFTLRD 779
Query: 259 EMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
EM GI P TY+ALI GL V++A+ LL ++ KGI TP+ Y L D
Sbjct: 780 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGI-TPNAITYNTLID 833
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 50/264 (18%)
Query: 76 EMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISR-GIEPTIVTY 134
+M+ E + P +++ C G +DKA+ + E S G+E +VTY
Sbjct: 215 QMISFE--VSPDVFTCSIVVNAYCRSG--------NVDKAMVFAKETESSLGLELNVVTY 264
Query: 135 TLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK---------------- 178
LI +G G +++ M E+G+ +V TY +L+ GY K
Sbjct: 265 NSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE 324
Query: 179 -----------------CK--YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---E 216
C+ I + ++D M+E ++ N N+++ G+C+ E
Sbjct: 325 KKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE 384
Query: 217 AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
A+++F +M +KPDH +YN L+ GY R GYV EA ++ D+M + + PT TY+ L+
Sbjct: 385 AEQIFSRMNDWSLKPDHHTYNTLVDGYC-RAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 277 LGLRINHEVEQAEELLKEMVSKGI 300
G L K M+ +G+
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGV 467
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 28 QAKELLKEMKRASDMSDSGLVRYAYSDN-SYNFVMY---KEGGLEEASDLLPEMLELESG 83
A LK K A + +S + +N YN + K G LE+A L ++L +
Sbjct: 692 SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDR- 750
Query: 84 LVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFE 143
+P Y LI C G +I+KA +DEM +GI P IVTY LI+ L +
Sbjct: 751 FIPDEYTYTILIHGCAIAG--------DINKAFTLRDEMALKGIIPNIVTYNALIKGLCK 802
Query: 144 VGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEK 195
+G A+ ++ ++ +KG+ + TYNTL+ G K + + + ++M+EK
Sbjct: 803 LGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK 854
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 54/265 (20%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEM-KRASDMSDSGLVRYAYSDNSYNFVMYK 63
G PT+ TY AL+ G C +++A EM ++ ++ + + A S +++
Sbjct: 606 GLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANS-------LFR 658
Query: 64 EGGLEEASDLLPEMLE--------------LESG----------------------LVPH 87
++EA LL ++++ LE+ LVP+
Sbjct: 659 LDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPN 718
Query: 88 TLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRS 147
++Y+ I G+ G L++ K + D + S P TYT+LI G
Sbjct: 719 NIVYNVAI-----AGLCKAGKLEDARKL--FSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771
Query: 148 WGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTM 207
A + EM KG+ ++ TYN L+ G K +D + ++ +K I PN +TYNT+
Sbjct: 772 NKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTL 831
Query: 208 MLGHCR---CSEAQKLFDKMKTSGI 229
+ G + +EA +L +KM G+
Sbjct: 832 IDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 150/303 (49%), Gaps = 21/303 (6%)
Query: 2 LKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM 61
LK F+P + Y LV G C E+ +A+++ KEMK A G+ Y+ + +
Sbjct: 247 LKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLA------GIEPNVYTYSIVIDAL 300
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
+ G + A D+ +ML+ SG P+ + ++ L+ G +K + ++
Sbjct: 301 CRCGQISRAHDVFADMLD--SGCAPNAITFNNLMRVHVKAG--------RTEKVLQVYNQ 350
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M G EP +TY LIEA A ++ M +K +++ T+NT+ K +
Sbjct: 351 MKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRD 410
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMM---LGHCRCSEAQKLFDKMKTSGIKPDHLSYNL 238
++ +Y +M+E + +PN +TYN +M +G K+ +M ++P+ +Y L
Sbjct: 411 VNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRL 470
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNG-IDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
L+ + G + A+++ EM++ + P+ + Y+ ++ LR ++++ EEL+++M+
Sbjct: 471 LVTMFCGMGHW-NNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQ 529
Query: 298 KGI 300
KG+
Sbjct: 530 KGL 532
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 13/262 (4%)
Query: 56 SYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKA 115
+++ V+ AS+ L+ P ++Y L+ C G EI +A
Sbjct: 223 AFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAG--------EISEA 274
Query: 116 VAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
EM GIEP + TY+++I+AL G+ A D+ +M + G + T+N LM
Sbjct: 275 EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRV 334
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPD 232
+ K + + +Y++M + +P+ +TYN ++ HCR A K+ + M + +
Sbjct: 335 HVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVN 394
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELL 292
++N I Y + V A R+ +M++ +P TY+ L+ + + ++
Sbjct: 395 ASTFN-TIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453
Query: 293 KEMVSKGICTPDDKKYLILTDM 314
KEM K + P+ Y +L M
Sbjct: 454 KEMDDKEV-EPNVNTYRLLVTM 474
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 167 YTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDK 223
+ YN ++ K + D + D M + ++ ++ T+ ++ + R SEA F++
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNR 211
Query: 224 MKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINH 283
M+ G PD ++++++I+ S R EA D LK+ +P Y L+ G
Sbjct: 212 MEDYGCVPDKIAFSIVISNLS-RKRRASEAQSFFDS-LKDRFEPDVIVYTNLVRGWCRAG 269
Query: 284 EVEQAEELLKEMVSKGICTPDDKKYLILTDMVHR 317
E+ +AE++ KEM GI P+ Y I+ D + R
Sbjct: 270 EISEAEKVFKEMKLAGI-EPNVYTYSIVIDALCR 302
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 21/316 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+L G P + T+ L+ G C E+++A +L K M++ D L+ Y+ + Y
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD--LIAYSTLIDGY--- 331
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+K G L L + L G+ +++ + ID G D +V YK
Sbjct: 332 -FKAGMLGMGHKLFSQ--ALHKGVKLDVVVFSSTIDVYVKSG-------DLATASVVYK- 380
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+ +GI P +VTYT+LI+ L + GR + A M ++ ++G++ + TY++L+ G+ KC
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
+ + +Y++M++ P+++ Y ++ G + A + KM I+ + + +N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G+ R EA +V M GI P T+ ++ + +E+A L M
Sbjct: 501 SLIDGWC-RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 298 KGICTPDDKKYLILTD 313
G+ PD Y L D
Sbjct: 560 MGL-EPDALAYCTLID 574
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 20/270 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K+G +P Y L+ C H + +L M+R +D + N +
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC------NVVIHL 610
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
++K +E+AS ++E + P + Y+T+I C SL +D+A +
Sbjct: 611 LFKCHRIEDASKFFNNLIE--GKMEPDIVTYNTMICGYC--------SLRRLDEAERIFE 660
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+ P VT T+LI L + GA M M EKG K + TY LM ++K
Sbjct: 661 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 720
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
I+ +++EM EK I P++++Y+ ++ G C R EA +F + + + PD ++Y
Sbjct: 721 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 780
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
+LI GY G V EA + + ML+NG+ P
Sbjct: 781 ILIRGYCKVGRLV-EAALLYEHMLRNGVKP 809
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 156/353 (44%), Gaps = 60/353 (16%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+LK G +P+I TY +L+ G C + L ++M + D +V Y +
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD--VVIYGVLVDG---- 470
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K+G + A +ML L + +++++LID C L+ D+A+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRL--NVVVFNSLIDGWC--------RLNRFDEALKVFR 520
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M GI+P + T+T ++ GR A + M + GL+ D Y TL+ + CK
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF--CK 578
Query: 181 YIDAHIGI-------------------------------------YDEMVEKRIQPNLLT 203
++ IG+ ++ ++E +++P+++T
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 204 YNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEM 260
YNTM+ G+C R EA+++F+ +K + P+ ++ +LI + + A R+ M
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC-KNNDMDGAIRMFSIM 697
Query: 261 LKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+ G P TY L+ + ++E + +L +EM KGI +P Y I+ D
Sbjct: 698 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI-SPSIVSYSIIID 749
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 27/309 (8%)
Query: 9 TITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM---YKEG 65
+ + +L+ G C + ++A ++ + M G+ ++ VM EG
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLM---------GIYGIKPDVATFTTVMRVSIMEG 545
Query: 66 GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISR 125
LEEA L M ++ GL P L Y TLID C T G + D M
Sbjct: 546 RLEEALFLFFRMFKM--GLEPDALAYCTLIDAFCKHMKPTIG--------LQLFDLMQRN 595
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH 185
I I ++I LF+ R A + E ++ D+ TYNT++ GY + +D
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 186 IGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAG 242
I++ + PN +T ++ C+ ++ A ++F M G KP+ ++Y L+
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715
Query: 243 YSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICT 302
+S + ++ +F++ +EM + GI P+ +Y +I GL V++A + + + +
Sbjct: 716 FS-KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL-L 773
Query: 303 PDDKKYLIL 311
PD Y IL
Sbjct: 774 PDVVAYAIL 782
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 112/214 (52%), Gaps = 5/214 (2%)
Query: 108 SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVY 167
S+D+I+ A ++ G P +VT+ LI + G A D+ K M+++G++ D+
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKM 224
Y+TL+ GY K + ++ + + K ++ +++ +++ + + + + A ++ +M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 225 KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHE 284
GI P+ ++Y +LI G + G + EAF + ++LK G++P+ TY +LI G
Sbjct: 383 LCQGISPNVVTYTILIKGLC-QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 285 VEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
+ L ++M+ G PD Y +L D + ++
Sbjct: 442 LRSGFALYEDMIKMGY-PPDVVIYGVLVDGLSKQ 474
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
Query: 110 DEIDKAVAYKDEMISRGIEPTIVT-YTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYT 168
D +D + D++ GIEP+ V+ + +++ALF G A D + + E+G ++ + +
Sbjct: 195 DRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVS 254
Query: 169 YNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFD---KMK 225
N ++ G + I+ + +++ PN++T+ T++ G C+ E + FD M+
Sbjct: 255 CNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313
Query: 226 TSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEV 285
GI+PD ++Y+ LI GY ++ G + ++ + L G+ + + I + ++
Sbjct: 314 QRGIEPDLIAYSTLIDGY-FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372
Query: 286 EQAEELLKEMVSKGICTPDDKKYLIL 311
A + K M+ +GI +P+ Y IL
Sbjct: 373 ATASVVYKRMLCQGI-SPNVVTYTIL 397
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 26/199 (13%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNF-----VM 61
+P I TY ++ G C+ +++A+ + + +K + N+ V+
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVT-----------PFGPNTVTLTILIHVL 681
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
K ++ A + M E G P+ + Y L+D +K + +GS + E
Sbjct: 682 CKNNDMDGAIRMFSIMAE--KGSKPNAVTYGCLMDWF-SKSVDIEGSFKLFE-------E 731
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M +GI P+IV+Y+++I+ L + GR A ++ + + L DV Y L+ GY K
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 791
Query: 182 IDAHIGIYDEMVEKRIQPN 200
+ +Y+ M+ ++P+
Sbjct: 792 LVEAALLYEHMLRNGVKPD 810
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 110/203 (54%), Gaps = 4/203 (1%)
Query: 112 IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
+ ++V +M G+E TI +Y L + + GR A+ +M +G++ +TYN
Sbjct: 201 VQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNL 260
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSG 228
++ G+ ++ + +++M + I P+ T+NTM+ G CR EA+KLF +MK +
Sbjct: 261 MLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNK 320
Query: 229 IKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
I P +SY +I GY V + R+ +EM +GI+P TTY L+ GL ++ +A
Sbjct: 321 IGPSVVSYTTMIKGY-LAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEA 379
Query: 289 EELLKEMVSKGICTPDDKKYLIL 311
+ +LK M++K I D+ +L L
Sbjct: 380 KNILKNMMAKHIAPKDNSIFLKL 402
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A Y ++M+S G+EPT TY L++ F R A ++M+ +G+ D T+NT+++
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMIN 298
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKP 231
G+ + K +D ++ EM +I P++++Y TM+ G+ R + ++F++M++SGI+P
Sbjct: 299 GFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEP 358
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT-FTTYDALILGLRINHEVEQAEE 290
+ +Y+ L+ G G V EA + M+ I P + + L++ ++ A E
Sbjct: 359 NATTYSTLLPGLCDAGKMV-EAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATE 417
Query: 291 LLKEMVS 297
+LK M +
Sbjct: 418 VLKAMAT 424
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 89/166 (53%), Gaps = 4/166 (2%)
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
T+ +I+ L EV + A ++ +M EKG+ D + L+ Y K + + I+ +M
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 193 VEKRIQPNLLTYNTM---MLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
+ ++ + +YN++ +L R A++ F+KM + G++P +YNL++ G+ +
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGF-FLSLR 270
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
++ A R ++M GI P T++ +I G ++++AE+L EM
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 13/238 (5%)
Query: 42 MSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTK 101
M D G+ R S NS V+ + G A +M+ G+ P Y+ ++
Sbjct: 211 MKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS--EGVEPTRHTYNLML------ 262
Query: 102 GIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG 161
G SL ++ A+ + ++M +RGI P T+ +I + AE + EM+
Sbjct: 263 -WGFFLSL-RLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNK 320
Query: 162 LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQ 218
+ V +Y T++ GY +D + I++EM I+PN TY+T++ G C + EA+
Sbjct: 321 IGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAK 380
Query: 219 KLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
+ M I P S L + + G + A V M + Y LI
Sbjct: 381 NILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLI 438
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 140/355 (39%), Gaps = 74/355 (20%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G +PT TY ++ G +E A ++MK D ++ F
Sbjct: 246 MVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDA----TFNTMINGFC 301
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKG--SLDEIDKAVAY 118
+K+ ++EA L EM + G P + Y T+I KG ++D +D +
Sbjct: 302 RFKK--MDEAEKLFVEMKGNKIG--PSVVSYTTMI----------KGYLAVDRVDDGLRI 347
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG---------LKLDVYT- 168
+EM S GIEP TY+ L+ L + G+ A++++K M K LKL V
Sbjct: 348 FEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQS 407
Query: 169 --------------------------YNTLMSGYAKCKYIDAHIGIYDEMVEKRI----- 197
Y L+ K + I + D ++EK I
Sbjct: 408 KAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQ 467
Query: 198 -----QPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
+P+ YN ++ C + ++A+ LF ++ G++ D + N LI G++ + G
Sbjct: 468 DTLEMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHA-KEGN 523
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
++ + M + G+ Y+ LI E A+ L MV G PD
Sbjct: 524 PDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDG-HVPD 577
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 133/315 (42%), Gaps = 61/315 (19%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEM--KRASDMSDSGLVRYAYSDNSYN 58
M G +P TTY L+ G C ++ +AK +LK M K + +S ++ S +
Sbjct: 351 MRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQS--- 407
Query: 59 FVMYKEGGLEEASDLLPEMLELESGLVPHTL-IYDTLIDECC-----TKGIGTKGSLDEI 112
K G + A+++L M L VP Y LI+ C + I +L E
Sbjct: 408 ----KAGDMAAATEVLKAMATLN---VPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEK 460
Query: 113 DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTL 172
+ + ++D + +EP+ Y +IE L G++ AE + +++ ++G++ D N L
Sbjct: 461 EIILRHQDTL---EMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNL 514
Query: 173 MSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPD 232
+ G+AK D+ +Y + + M G+ +
Sbjct: 515 IRGHAKEGNPDS------------------SYEILKI--------------MSRRGVPRE 542
Query: 233 HLSYNLLIAGYSYRG--GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEE 290
+Y LLI Y +G G K A D M+++G P + + ++I L + V+ A
Sbjct: 543 SNAYELLIKSYMSKGEPGDAKTAL---DSMVEDGHVPDSSLFRSVIESLFEDGRVQTASR 599
Query: 291 LLKEMVSKGICTPDD 305
++ M+ K + D+
Sbjct: 600 VMMIMIDKNVGIEDN 614
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 142/303 (46%), Gaps = 30/303 (9%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + TY L+ C E E+A+ L M + D + Y+ N + K
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPD--VFSYSTVIND----LAKA 197
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G L++A +L EM E G+ P Y+ LID G L E D A E+
Sbjct: 198 GKLDDALELFDEMSE--RGVAPDVTCYNILID----------GFLKEKDHKTAM--ELWD 243
Query: 125 RGIE-----PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
R +E P + T+ ++I L + GR + + M++ + D+YTY++L+ G
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSY 236
+D +++E+ E++ +++TYNTM+ G CRC E+ +L+ M+ + +SY
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSY 362
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
N+LI G G + EA + M G TTY I GL +N V +A +++E+
Sbjct: 363 NILIKGL-LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 297 SKG 299
S G
Sbjct: 422 SSG 424
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%), Gaps = 20/299 (6%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G+ TTY + G C + V +A +++E++ + D YAY+ S + K+
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDV----YAYA--SIIDCLCKK 442
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
LEEAS+L+ EM + L H C IG + +A + EM
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHV----------CNALIGGLIRDSRLGEASFFLREMGK 492
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G PT+V+Y +LI L + G+ A +KEM E G K D+ TY+ L+ G + + ID
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ ++ + ++ ++ +++ +N ++ G C + +A + M+ + ++YN L+
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G+ ++ G A + M K G+ P +Y+ ++ GL + V A E + + GI
Sbjct: 613 GF-FKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 42/269 (15%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMK-------------------RASDMSDSGLVRY 50
+ Y +++ C +E+A L+KEM R S + ++
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488
Query: 51 AYSDN-------SYNFV---MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCT 100
N SYN + + K G EAS + EMLE +G P Y L+ C
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE--NGWKPDLKTYSILLCGLCR 546
Query: 101 KGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEK 160
+ID A+ + + G+E ++ + +LI L VG+ A ++ M+ +
Sbjct: 547 D--------RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Query: 161 GLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEA 217
++ TYNTLM G+ K + I+ M + +QP++++YNT+M G C C S A
Sbjct: 599 NCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYA 658
Query: 218 QKLFDKMKTSGIKPDHLSYNLLIAGYSYR 246
+ FD + GI P ++N+L+ R
Sbjct: 659 MEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 136/304 (44%), Gaps = 34/304 (11%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV---MYKEGG 66
+ TY ++ G C +++++ EL + M+ + ++ SYN + + + G
Sbjct: 325 VVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV----------SYNILIKGLLENGK 374
Query: 67 LEEAS---DLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMI 123
++EA+ L+P G Y I C G ++KA+ E+
Sbjct: 375 IDEATMIWRLMPA-----KGYAADKTTYGIFIHGLCVNGY--------VNKALGVMQEVE 421
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
S G + Y +I+ L + R A +++KEM + G++L+ + N L+ G + +
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYNLLI 240
EM + +P +++YN ++ G C+ EA +M +G KPD +Y++L+
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G R + A + + L++G++ ++ LI GL +++ A ++ M +
Sbjct: 542 CGLC-RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN- 599
Query: 301 CTPD 304
CT +
Sbjct: 600 CTAN 603
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 42/210 (20%)
Query: 126 GIEPTIVTYTLLIEALFEVGRSW------------------------------------G 149
G EP I +Y L+ A E + W
Sbjct: 109 GCEPAIRSYNTLLNAFVE-AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEK 167
Query: 150 AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMML 209
A + M ++G K DV++Y+T+++ AK +D + ++DEM E+ + P++ YN ++
Sbjct: 168 ARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID 227
Query: 210 GHCRCSE---AQKLFDK-MKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGI 265
G + + A +L+D+ ++ S + P+ ++N++I+G S + G V + ++ + M +N
Sbjct: 228 GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLS-KCGRVDDCLKIWERMKQNER 286
Query: 266 DPTFTTYDALILGLRINHEVEQAEELLKEM 295
+ TY +LI GL V++AE + E+
Sbjct: 287 EKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Query: 150 AEDMIKEMQEK-GLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM 208
A D+ K M+E G + + +YNTL++ + + K ++ + PNL TYN ++
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 209 LGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGI 265
C+ E +K D M G KPD SY+ +I + + G + +A + DEM + G+
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLA-KAGKLDDALELFDEMSERGV 215
Query: 266 DPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
P T Y+ LI G + + A EL ++ P+ K + I+
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIM 261
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 160/345 (46%), Gaps = 36/345 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M +V P + T L+ C V++A E+ ++M+ +D G V A S + +
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR--GKRTDDGNVIKADSIHFNTLI 377
Query: 61 --MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG-------IGTKGSLDE 111
+ K G L+EA +LL M +LE VP+ + Y+ LID C G + ++ DE
Sbjct: 378 DGLCKVGRLKEAEELLVRM-KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436
Query: 112 I--------------------DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
I + AV + +M G++ +VTY LI A V A
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
++M E G D Y L+SG + + I + +++ E +LL YN ++
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 212 CRCSEAQKLFD---KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
C + A+K+++ M+ G KPD ++YN LI+ + + + R+ ++M ++G+DPT
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF-ESVERMMEQMREDGLDPT 615
Query: 269 FTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
TTY A+I E+++A +L K+M P+ Y IL +
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILIN 660
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 149/339 (43%), Gaps = 63/339 (18%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P TY L+ G C ++E AKE++ MK + + + N+ M + GL
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMK------EDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
A +M + G+ + + Y TLI CC S+ ++KA+ + ++M+ G
Sbjct: 458 NMAVVFFMDMEK--EGVKGNVVTYMTLIHACC--------SVSNVEKAMYWYEKMLEAGC 507
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLD-------------------VY- 167
P Y LI L +V R A ++++++E G LD VY
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYE 567
Query: 168 ---------------TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC 212
TYNTL+S + K K ++ + ++M E + P + TY ++ +C
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 213 RCSE---AQKLFDKMKT-SGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
E A KLF M S + P+ + YN+LI +S G + +A +++EM + P
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF-GQALSLKEEMKMKMVRPN 686
Query: 269 FTTYDALILGLRINHEVEQAEELLK---EMVSKGICTPD 304
TY+AL L +E Q E LLK EMV + C P+
Sbjct: 687 VETYNALFKCL---NEKTQGETLLKLMDEMVEQS-CEPN 721
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 34/305 (11%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + C + A ++L SD+ + A N+ + +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDIL------SDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
+ +DL+ +M E++ + P + LI+ C +D+A+ ++M
Sbjct: 308 MDISRMNDLVLKMDEVK--IRPDVVTLGILINTLCKS--------RRVDEALEVFEQM-- 355
Query: 125 RG--------IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQ-EKGLKLDVYTYNTLMSG 175
RG I+ + + LI+ L +VGR AE+++ M+ E+ + TYN L+ G
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDG 415
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPD 232
Y + ++ + M E I+PN++T NT++ G CR + A F M+ G+K +
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL---RINHEVEQAE 289
++Y LI V++A ++ML+ G P Y ALI GL R +H+ +
Sbjct: 476 VVTYMTLIHACCSVSN-VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 290 ELLKE 294
E LKE
Sbjct: 535 EKLKE 539
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF + Y L+ C + E+ E+L +M++ DS + Y N+ K
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS--ITY----NTLISFFGKH 594
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA-YKDEMI 123
E ++ +M E GL P Y +ID C+ G E+D+A+ +KD +
Sbjct: 595 KDFESVERMMEQMRE--DGLDPTVTTYGAVIDAYCSVG--------ELDEALKLFKDMGL 644
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
+ P V Y +LI A ++G A + +EM+ K ++ +V TYN L + +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMM 208
+ + DEMVE+ +PN +T +M
Sbjct: 705 TLLKLMDEMVEQSCEPNQITMEILM 729
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 160/345 (46%), Gaps = 36/345 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M +V P + T L+ C V++A E+ ++M+ +D G V A S + +
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR--GKRTDDGNVIKADSIHFNTLI 377
Query: 61 --MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG-------IGTKGSLDE 111
+ K G L+EA +LL M +LE VP+ + Y+ LID C G + ++ DE
Sbjct: 378 DGLCKVGRLKEAEELLVRM-KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436
Query: 112 I--------------------DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
I + AV + +M G++ +VTY LI A V A
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
++M E G D Y L+SG + + I + +++ E +LL YN ++
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 212 CRCSEAQKLFD---KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
C + A+K+++ M+ G KPD ++YN LI+ + + + R+ ++M ++G+DPT
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF-ESVERMMEQMREDGLDPT 615
Query: 269 FTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
TTY A+I E+++A +L K+M P+ Y IL +
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILIN 660
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 144/327 (44%), Gaps = 59/327 (18%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P TY L+ G C ++E AKE++ MK D +V + N+ M + GL
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMK--EDEIKPNVV----TVNTIVGGMCRHHGL 457
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
A +M + G+ + + Y TLI CC S+ ++KA+ + ++M+ G
Sbjct: 458 NMAVVFFMDMEK--EGVKGNVVTYMTLIHACC--------SVSNVEKAMYWYEKMLEAGC 507
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLD-------------------VY- 167
P Y LI L +V R A ++++++E G LD VY
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYE 567
Query: 168 ---------------TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC 212
TYNTL+S + K K ++ + ++M E + P + TY ++ +C
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 213 RCSE---AQKLFDKMKT-SGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
E A KLF M S + P+ + YN+LI +S G + +A +++EM + P
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF-GQALSLKEEMKMKMVRPN 686
Query: 269 FTTYDALILGLRINHEVEQAEELLKEM 295
TY+AL L +E Q E LLK M
Sbjct: 687 VETYNALFKCL---NEKTQGETLLKLM 710
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 34/305 (11%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + C + A ++L SD+ + A N+ + +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDIL------SDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
+ +DL+ +M E++ + P + LI+ C +D+A+ ++M
Sbjct: 308 MDISRMNDLVLKMDEVK--IRPDVVTLGILINTLCKS--------RRVDEALEVFEQM-- 355
Query: 125 RG--------IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQ-EKGLKLDVYTYNTLMSG 175
RG I+ + + LI+ L +VGR AE+++ M+ E+ + TYN L+ G
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDG 415
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPD 232
Y + ++ + M E I+PN++T NT++ G CR + A F M+ G+K +
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL---RINHEVEQAE 289
++Y LI V++A ++ML+ G P Y ALI GL R +H+ +
Sbjct: 476 VVTYMTLIHACCSVSN-VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 290 ELLKE 294
E LKE
Sbjct: 535 EKLKE 539
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 17/191 (8%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF + Y L+ C + E+ E+L +M++ DS + Y N+ K
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS--ITY----NTLISFFGKH 594
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA-YKDEMI 123
E ++ +M E GL P Y +ID C+ G E+D+A+ +KD +
Sbjct: 595 KDFESVERMMEQMRE--DGLDPTVTTYGAVIDAYCSVG--------ELDEALKLFKDMGL 644
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
+ P V Y +LI A ++G A + +EM+ K ++ +V TYN L + +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 184 AHIGIYDEMVE 194
+ + DEMVE
Sbjct: 705 TLLKLMDEMVE 715
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 47/259 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSD--------SGLVRYAY 52
M K G + TY L+ CC+ VE+A ++M A D SGL +
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 53 SDNSYNFV-MYKEGGLEEASDLLP------------------EML-ELES-GLVPHTLIY 91
++ V KEGG + DLL EML ++E G P ++ Y
Sbjct: 527 DHDAIRVVEKLKEGGF--SLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
+TLI G + +++ + ++M G++PT+ TY +I+A VG A
Sbjct: 585 NTLIS-----FFGKHKDFESVERMM---EQMREDGLDPTVTTYGAVIDAYCSVGELDEAL 636
Query: 152 DMIKEMQ-EKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
+ K+M + + YN L++ ++K + + +EM K ++PN+ TYN +
Sbjct: 637 KLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF-- 694
Query: 211 HCRCSEAQ-----KLFDKM 224
C + Q KL D+M
Sbjct: 695 KCLNEKTQGETLLKLMDEM 713
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 147/314 (46%), Gaps = 24/314 (7%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEE 69
+ Y A++ + +A+EL+ M++ G V S N+ K GGL
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQ------RGCVPDLISFNTLINARLKSGGL-- 276
Query: 70 ASDLLPEMLEL--ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
+L E+L++ SGL P + Y+TL+ C +D AV ++M +
Sbjct: 277 TPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDS--------NLDGAVKVFEDMEAHRC 328
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
+P + TY +I G + AE + E++ KG D TYN+L+ +A+ + +
Sbjct: 329 QPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKE 388
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMK-TSGIKPDHLSYNLLIAGY 243
+Y +M + + +TYNT++ + + + A +L+ MK SG PD ++Y +LI
Sbjct: 389 VYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL 448
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
+ EA + EML GI PT TY ALI G + E+AE+ M+ G P
Sbjct: 449 G-KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGT-KP 506
Query: 304 DDKKYLILTDMVHR 317
D+ Y ++ D++ R
Sbjct: 507 DNLAYSVMLDVLLR 520
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 52/290 (17%)
Query: 8 PTITTYKAL--VLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEG 65
P + TY A+ V G C +A+ L E++ D A + NS + +E
Sbjct: 330 PDLWTYNAMISVYGRCGL--AAEAERLFMELELKGFFPD------AVTYNSLLYAFARER 381
Query: 66 GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISR 125
E+ ++ +M ++ G + Y+T+I G +G LD + YKD
Sbjct: 382 NTEKVKEVYQQMQKM--GFGKDEMTYNTIIHM-----YGKQGQLDLALQL--YKDMKGLS 432
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH 185
G P +TYT+LI++L + R+ A ++ EM + G+K + TY+ L+ GYAK
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAG----- 487
Query: 186 IGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSY 245
KR EA+ F M SG KPD+L+Y++++
Sbjct: 488 ---------KR------------------EEAEDTFSCMLRSGTKPDNLAYSVML-DVLL 519
Query: 246 RGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
RG ++A+ + +M+ +G P++T Y+ +ILGL + + ++ +++M
Sbjct: 520 RGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 103/202 (50%), Gaps = 7/202 (3%)
Query: 102 GIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG 161
G++ E+ K + M + G PTI Y ++IE L + R AE M+ EM+E
Sbjct: 866 AFARAGNIFEVKKIYS---SMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 162 LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQ 218
K+++ +N+++ Y + + +Y + E ++P+ TYNT+++ +C R E
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 219 KLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILG 278
L +M+ G+ P +Y LI+ + + +++A ++ +E+L G+ + Y ++
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFG-KQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Query: 279 LRINHEVEQAEELLKEMVSKGI 300
R + +AE+LL+ M + GI
Sbjct: 1042 SRDSGSDSKAEKLLQMMKNAGI 1063
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 126/307 (41%), Gaps = 22/307 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M G+ PTI Y+ ++ C V A+ ++ EM+ A+ + + +N +
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAI---------WNSM 933
Query: 61 MYKEGGLEEASDLLPEMLEL-ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ +E+ + + E+GL P Y+TLI C +G L
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL--------LM 985
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+M + G++P + TY LI A + AE + +E+ KGLKLD Y+T+M
Sbjct: 986 QQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDS 1045
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSY 236
+ M I+P L T + +M+ + EA+K+ +K + ++ L Y
Sbjct: 1046 GSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPY 1105
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
+ +I Y Y R+ EM K G++P + + + E + LLK +
Sbjct: 1106 SSVIDAYLRSKDYNSGIERLL-EMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALE 1164
Query: 297 SKGICTP 303
G P
Sbjct: 1165 DIGFDLP 1171
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 5/204 (2%)
Query: 108 SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVY 167
++++ K V + G+EP TY LI R ++++M+ GL +
Sbjct: 939 AIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLD 998
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM---LGHCRCSEAQKLFDKM 224
TY +L+S + K K ++ +++E++ K ++ + Y+TMM S+A+KL M
Sbjct: 999 TYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMM 1058
Query: 225 KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHE 284
K +GI+P + +LL+ YS G +EA +V + ++ T Y ++I + +
Sbjct: 1059 KNAGIEPTLATMHLLMVSYSSSGN-PQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 285 VEQAEELLKEMVSKGICTPDDKKY 308
E L EM +G+ PD + +
Sbjct: 1118 YNSGIERLLEMKKEGL-EPDHRIW 1140
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 134 YTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMV 193
YT +IEA + AE ++ +++ G D+ T+N+LMS YA+C + I++ M+
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 194 EKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYV 250
P + + N ++ C R E + ++++ G K S L++ ++ R G +
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFA-RAGNI 873
Query: 251 KEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
E ++ M G PT Y +I L V AE ++ EM
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM 918
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 132/274 (48%), Gaps = 25/274 (9%)
Query: 57 YNFVMYKEGGLEEASD---LLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEID 113
+N V+ G + +D L +L+ + P + L+ C S+ +
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACR---APDSSISNVH 144
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM 173
+ + + M++ G+EP VT + + +L E GR A+D++KE+ EK D YTYN L+
Sbjct: 145 RVL---NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL 201
Query: 174 SGYAKCKYIDAHIGIYDEMVEKR----IQPNLLTYNTMMLGHCRCS---EAQKLFDKMKT 226
KCK D H+ +Y+ + E R ++P+L+++ ++ C EA L K+
Sbjct: 202 KHLCKCK--DLHV-VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 227 SGIKPDHLSYNLLIAGYS--YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHE 284
+G KPD YN ++ G+ +G EA V +M + G++P TY+ LI GL
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGS---EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 285 VEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
VE+A LK MV G PD Y L + + R+
Sbjct: 316 VEEARMYLKTMVDAGY-EPDTATYTSLMNGMCRK 348
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G ++EA DL+ E+ E S P T Y+ L+ C ++ + DEM
Sbjct: 173 GRVDEAKDLMKELTEKHSP--PDTYTYNFLLKHLC--------KCKDLHVVYEFVDEMRD 222
Query: 125 R-GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
++P +V++T+LI+ + A ++ ++ G K D + YNT+M G+
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
+G+Y +M E+ ++P+ +TYNT++ G R EA+ M +G +PD +Y L+
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 241 AGYSYRG 247
G +G
Sbjct: 343 NGMCRKG 349
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 34/271 (12%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P + TY ++ C +E +QA L ++MKR D +V Y+ NS
Sbjct: 633 PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPD--VVTYSVLLNS----------- 679
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
+ D+ EM + ++P + Y +I+ C L+++ K A +M R I
Sbjct: 680 DPELDMKREMEAFD--VIPDVVYYTIMINRYC--------HLNDLKKVYALFKDMKRREI 729
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
P +VTYT+L++ E ++ +EM+ +K DV+ Y L+ K +
Sbjct: 730 VPDVVTYTVLLKNKPE-------RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKR 782
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
I+D+M+E + P+ Y ++ C+ EA+ +FD+M SG+KPD + Y LIAG
Sbjct: 783 IFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCC 842
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDAL 275
R G+V +A ++ EML+ GI PT + A+
Sbjct: 843 -RNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 162/377 (42%), Gaps = 91/377 (24%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVR---------YAYS-- 53
G PT T+ ++ G E+++A+ + ++ S +D+ +V+ +A+
Sbjct: 496 GVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERF 555
Query: 54 -------DNSYNFVMY-----KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECC-- 99
S F ++ ++ + +A DLL M +L G+ P +Y LI C
Sbjct: 556 IRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKL--GVEPEKSMYGKLIGAWCRV 613
Query: 100 -------------------------TKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTY 134
T I T L+E +A A ++M R ++P +VTY
Sbjct: 614 NNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTY 673
Query: 135 TLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVE 194
++L+ + E+ DM +EM+ + DV Y +++ Y + ++ +M
Sbjct: 674 SVLLNSDPEL-------DMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKR 726
Query: 195 KRIQPNLLTYNTMM--------------------------LGHCRCS-----EAQKLFDK 223
+ I P+++TY ++ L +C EA+++FD+
Sbjct: 727 REIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQ 786
Query: 224 MKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINH 283
M SG+ PD Y LIA + GY+KEA + D M+++G+ P Y ALI G N
Sbjct: 787 MIESGVDPDAAPYTALIACCC-KMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNG 845
Query: 284 EVEQAEELLKEMVSKGI 300
V +A +L+KEM+ KGI
Sbjct: 846 FVLKAVKLVKEMLEKGI 862
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 16/290 (5%)
Query: 13 YKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASD 72
Y + G C + + A LL+ ++ A+ + D + AY E +E+A
Sbjct: 255 YLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCY--EMRIEDAES 312
Query: 73 LLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIV 132
++ +M + G+ P +Y +I+ G + +++ I KAV ++M+ + V
Sbjct: 313 VVLDMEK--HGIDPDVYVYSAIIE-------GHRKNMN-IPKAVDVFNKMLKKRKRINCV 362
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
+ +++ ++G A D+ KE +E + LD YN K ++ I ++ EM
Sbjct: 363 IVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM 422
Query: 193 VEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
K I P+++ Y T++ G C +CS+A L +M +G PD + YN+L G + G
Sbjct: 423 TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLA-TNGL 481
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+EAF M G+ PT+ T++ +I GL E+++AE + + K
Sbjct: 482 AQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 144/347 (41%), Gaps = 46/347 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQA----KELLKEMKRASDMSDSGLVR------- 49
M K G DP + Y A++ G + + +A ++LK+ KR + + S +++
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN 376
Query: 50 ----------YAYSDNSYNFVMY--------KEGGLEEASDLLPEMLELESGLVPHTLIY 91
+ ++ S + V Y K G +EEA +L EM G+ P + Y
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM--TGKGIAPDVINY 434
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
TLI CC +G + D D + EM G P IV Y +L L G + A
Sbjct: 435 TTLIGGCCLQGKCS----DAFDLMI----EMDGTGKTPDIVIYNVLAGGLATNGLAQEAF 486
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
+ +K M+ +G+K T+N ++ G +D Y+ + K + + +M+ G
Sbjct: 487 ETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVKGF 542
Query: 212 CRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTT 271
C F++ Y L Y+ +A + D M K G++P +
Sbjct: 543 CAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSM 602
Query: 272 YDALI-LGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHR 317
Y LI R+N+ V +A E + +V+K I PD Y I+ + R
Sbjct: 603 YGKLIGAWCRVNN-VRKAREFFEILVTKKI-VPDLFTYTIMINTYCR 647
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 147/372 (39%), Gaps = 80/372 (21%)
Query: 17 VLGC-CTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLP 75
+L C C +A +L KE + + D A+ + K G +EEA +L
Sbjct: 367 ILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFD------ALGKLGKVEEAIELFR 420
Query: 76 EMLELESGLVPHTLIYDTLIDECCTKGI------------GTKGSLDEI----------- 112
EM G+ P + Y TLI CC +G GT + D +
Sbjct: 421 EMTG--KGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLAT 478
Query: 113 ----DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG------- 161
+A M +RG++PT VT+ ++IE L + G AE + ++ K
Sbjct: 479 NGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASM 538
Query: 162 ---------------------LKLDVYTYNTLMSGY-AKCKYIDAHIGIYDEMVEKRIQP 199
L Y TL + A+ YI + D M + ++P
Sbjct: 539 VKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEP 598
Query: 200 NLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRV 256
Y ++ CR + +A++ F+ + T I PD +Y ++I Y R K+A+ +
Sbjct: 599 EKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYC-RLNEPKQAYAL 657
Query: 257 RDEMLKNGIDPTFTTYDALILG---LRINHEVEQAEELLKEMVSKGI-----CTPDD--K 306
++M + + P TY L+ L + E+E A +++ ++V I C +D K
Sbjct: 658 FEDMKRRDVKPDVVTYSVLLNSDPELDMKREME-AFDVIPDVVYYTIMINRYCHLNDLKK 716
Query: 307 KYLILTDMVHRE 318
Y + DM RE
Sbjct: 717 VYALFKDMKRRE 728
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 148/303 (48%), Gaps = 30/303 (9%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY-- 62
G P+ T+ +L+ E++ A E+L+ M + V Y + + + V+
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKN-------VNYPFDNFVCSAVISGF 181
Query: 63 -KEGGLEEASDLLPEMLELESG-LVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G E A ++SG LVP+ + Y TL+ C G +DE+ V +
Sbjct: 182 CKIGKPELALGFFES--AVDSGVLVPNLVTYTTLVSALC-----QLGKVDEVRDLVRRLE 234
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+ G E V Y+ I F+ G A +EM EKG+ DV +Y+ L+ G +K
Sbjct: 235 D---EGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEG 291
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
++ +G+ +M+++ ++PNL+TY ++ G C+ EA LF+++ + GI+ D Y
Sbjct: 292 NVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYV 351
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G R G + AF + +M + GI P+ TY+ +I GL + V +A+E VS
Sbjct: 352 TLIDGIC-RKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE-----VS 405
Query: 298 KGI 300
KG+
Sbjct: 406 KGV 408
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 61/303 (20%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K G +P + TY A++ G C
Sbjct: 303 MIKEGVEPNLITYTAIIRGLC--------------------------------------- 323
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G LEEA L +L + G+ +Y TLID C KG +++A +
Sbjct: 324 --KMGKLEEAFVLFNRILSV--GIEVDEFLYVTLIDGICRKG--------NLNRAFSMLG 371
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M RGI+P+I+TY +I L GR A+++ KG+ DV TY+TL+ Y K +
Sbjct: 372 DMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQ 426
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMM---LGHCRCSEAQKLFDKMKTSGIKPDHLSYN 237
IDA + I +E +I +L+ N ++ L EA L+ M + PD +Y
Sbjct: 427 NIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYA 486
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+I GY + G ++EA + +E+ K+ + Y+ +I L ++ A E+L E+
Sbjct: 487 TMIKGYC-KTGQIEEALEMFNELRKSSVSAA-VCYNRIIDALCKKGMLDTATEVLIELWE 544
Query: 298 KGI 300
KG+
Sbjct: 545 KGL 547
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 146/304 (48%), Gaps = 26/304 (8%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P + TY LV C +V++ ++L++ ++ D V Y+ + Y +K G L
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDC--VFYSNWIHGY----FKGGAL 258
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
+A L+ + +E G+ + Y LID G+ +G+++E A+ +MI G+
Sbjct: 259 VDA--LMQDREMVEKGMNRDVVSYSILID-----GLSKEGNVEE---ALGLLGKMIKEGV 308
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
EP ++TYT +I L ++G+ A + + G+++D + Y TL+ G + ++
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
+ +M ++ IQP++LTYNT++ G C R SEA ++ + G+ D ++Y+ L+ Y
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSY- 422
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
+ + +R L+ I + L+ + +A+ L + M + TPD
Sbjct: 423 IKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDL-TPD 481
Query: 305 DKKY 308
Y
Sbjct: 482 TATY 485
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 63 KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEM 122
KEG L +A +L G+ +T+ Y++LI+ C +G + +A+ D +
Sbjct: 667 KEGFLVKALNLCS--FAKSRGVTLNTITYNSLINGLCQQGC--------LVEALRLFDSL 716
Query: 123 ISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYI 182
+ G+ P+ VTY +LI+ L + G AE ++ M KGL ++ YN+++ GY K
Sbjct: 717 ENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQT 776
Query: 183 DAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLL 239
+ + + + R+ P+ T ++M+ G+C+ EA +F + K I D + L
Sbjct: 777 EDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFL 836
Query: 240 IAGYSYRGGYVKEAFRVRDEML 261
I G+ + G ++EA + EML
Sbjct: 837 IKGFCTK-GRMEEARGLLREML 857
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 151/336 (44%), Gaps = 46/336 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M ++ P TY ++ G C ++E+A E+ E++++S V A N
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSS-------VSAAVCYNRIIDA 525
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKG------SLDEIDK 114
+ K+G L+ A+++L E+ E L HT TL+ G G KG L++++
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHT--SRTLLHSIHANG-GDKGILGLVYGLEQLNS 582
Query: 115 AV--------------------AYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMI 154
V A + MI R T+ + +++ L + RS A ++
Sbjct: 583 DVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLV 642
Query: 155 KEMQEKGL-KLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR 213
E L +DV Y +++G K ++ + + + + N +TYN+++ G C+
Sbjct: 643 VNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQ 702
Query: 214 ---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFT 270
EA +LFD ++ G+ P ++Y +LI G ++ +A ++ D M+ G+ P
Sbjct: 703 QGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFL-DAEKLLDSMVSKGLVPNII 761
Query: 271 TYDALILGLRINHEVEQAEELLKEMVSK--GICTPD 304
Y++++ G ++ Q E+ ++ + K G TPD
Sbjct: 762 IYNSIVDGY---CKLGQTEDAMRVVSRKMMGRVTPD 794
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 92/184 (50%), Gaps = 5/184 (2%)
Query: 131 IVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD 190
++ YT++I L + G A ++ + +G+ L+ TYN+L++G + + + ++D
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 191 EMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRG 247
+ + P+ +TY ++ C+ +A+KL D M + G+ P+ + YN ++ GY +
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC-KL 773
Query: 248 GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKK 307
G ++A RV + + P T ++I G ++E+A + E K I + D
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI-SADFFG 832
Query: 308 YLIL 311
+L L
Sbjct: 833 FLFL 836
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 149/322 (46%), Gaps = 25/322 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K G P TY L+ E A+ +LKEM+ A D+ + V +S F
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME-AGDVQPNSFV---FSRLLAGF- 419
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
G ++ +L EM + G+ P Y+ +ID T G + +D A+ D
Sbjct: 420 -RDRGEWQKTFQVLKEMKSI--GVKPDRQFYNVVID--------TFGKFNCLDHAMTTFD 468
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+S GIEP VT+ LI+ + GR AE+M + M+ +G TYN +++ Y +
Sbjct: 469 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 528
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTM--MLGHC-RCSEAQKLFDKMKTSGIKPDHLSYN 237
D + +M + I PN++T+ T+ + G R ++A + ++MK+ G+KP YN
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588
Query: 238 LLIAGYSYRG--GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
LI Y+ RG AFRV M +G+ P+ ++LI + +A +L+ M
Sbjct: 589 ALINAYAQRGLSEQAVNAFRV---MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Query: 296 VSKGICTPDDKKYLILTDMVHR 317
G+ PD Y L + R
Sbjct: 646 KENGV-KPDVVTYTTLMKALIR 666
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 142/339 (41%), Gaps = 46/339 (13%)
Query: 9 TITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSD--------SGLVRYAYSDNSYNFV 60
T TY AL+ C ++++E+A L+ +M++ SD L R D+
Sbjct: 196 TPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLR 255
Query: 61 MYKE-----------------------GGLEEASDLLPEMLELESGLVPHTLIYDTLIDE 97
+YKE G +A LL + +GL T ++I
Sbjct: 256 LYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLG--MAQATGLSAKTATLVSIISA 313
Query: 98 CCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM 157
G +A A +E+ GI+P Y L++ + G AE M+ EM
Sbjct: 314 LADSG--------RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 158 QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEA 217
+++G+ D +TY+ L+ Y ++ + EM +QPN ++ ++ G E
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 218 QKLFD---KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
QK F +MK+ G+KPD YN++I + + + A D ML GI+P T++
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFG-KFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 275 LILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
LI + AEE+ + M +G C P Y I+ +
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRG-CLPCATTYNIMIN 522
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 117/249 (46%), Gaps = 21/249 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML G +P T+ L+ C H A+E+ + M+R G + A +YN +
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER------RGCLPCA---TTYNIM 520
Query: 61 MYKEGGLEEASDLLPEMLELES-GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ G E D+ + +++S G++P+ + + TL+D G + A+
Sbjct: 521 INSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD--------VYGKSGRFNDAIECL 572
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+EM S G++P+ Y LI A + G S A + + M GLK + N+L++ + +
Sbjct: 573 EEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGED 632
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSY 236
+ + M E ++P+++TY T+M R + QK ++++M SG KPD +
Sbjct: 633 RRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKAR 692
Query: 237 NLLIAGYSY 245
++L + Y
Sbjct: 693 SMLRSALRY 701
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 99/201 (49%), Gaps = 7/201 (3%)
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
Y+ ++S+ T +TY LI A A ++I +M++ G + D Y+ ++
Sbjct: 184 YEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLT 243
Query: 178 KCKYIDA--HIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPD 232
+ ID+ + +Y E+ +++ ++ N +++G + S+A +L + +G+
Sbjct: 244 RSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAK 303
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELL 292
+ +I+ + G EA + +E+ ++GI P Y+AL+ G ++ AE ++
Sbjct: 304 TATLVSIISALA-DSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMV 362
Query: 293 KEMVSKGICTPDDKKYLILTD 313
EM +G+ +PD+ Y +L D
Sbjct: 363 SEMEKRGV-SPDEHTYSLLID 382
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 13/225 (5%)
Query: 78 LELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLL 137
L + SG++P Y L+++ C +G + A+ ++M G VTY L
Sbjct: 131 LMVSSGIIPDASAYTYLVNQLCKRG--------NVGYAMQLVEKMEDHGYPSNTVTYNAL 182
Query: 138 IEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRI 197
+ L +G + ++ + +KGL + +TY+ L+ K + D + + DE++ K
Sbjct: 183 VRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG 242
Query: 198 QPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAF 254
+PNL++YN ++ G C R +A LF ++ G K + +SYN+L+ G + +EA
Sbjct: 243 EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW-EEAN 301
Query: 255 RVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ EM P+ TY+ LI L + EQA ++LKEM SKG
Sbjct: 302 SLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKG 345
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 149/352 (42%), Gaps = 65/352 (18%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM--- 61
G+ TY ALV G C + Q+ + ++ + + GL A++ Y+F++
Sbjct: 171 GYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQ------KGLAPNAFT---YSFLLEAA 221
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
YKE G +EA LL E++ G P+ + Y+ L+ C +G D A+A E
Sbjct: 222 YKERGTDEAVKLLDEIIV--KGGEPNLVSYNVLLTGFCKEG--------RTDDAMALFRE 271
Query: 122 MISRGIE-----------------------------------PTIVTYTLLIEALFEVGR 146
+ ++G + P++VTY +LI +L GR
Sbjct: 272 LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGR 331
Query: 147 SWGAEDMIKEMQEKG--LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTY 204
+ A ++KEM + ++ +YN +++ K +D + DEM+ +R +PN TY
Sbjct: 332 TEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 391
Query: 205 N---TMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML 261
N ++ + + EA + + H Y +I R G AF++ EM
Sbjct: 392 NAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLC-RKGNTFAAFQLLYEMT 450
Query: 262 KNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP--DDKKYLIL 311
+ G DP TY ALI GL + A E+L M C P D+ +IL
Sbjct: 451 RCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMIL 502
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 144/326 (44%), Gaps = 30/326 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P + Y LV C V A +L+++M+ D G + N+
Sbjct: 132 MVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKME------DHGYPSNTVTYNALVRG 185
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G L ++ + +++ GL P+ Y L+ E K GT D+AV D
Sbjct: 186 LCMLGSLNQSLQFVERLMQ--KGLAPNAFTYSFLL-EAAYKERGT-------DEAVKLLD 235
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
E+I +G EP +V+Y +L+ + GR+ A + +E+ KG K +V +YN L+ +C
Sbjct: 236 EIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL----RCL 291
Query: 181 YIDAHI----GIYDEMVEKRIQPNLLTYNTM---MLGHCRCSEAQKLFDKMKTSG--IKP 231
D + EM P+++TYN + + H R +A ++ +M +
Sbjct: 292 CCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRV 351
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
SYN +IA + G V + DEM+ P TY+A+ N +V++A +
Sbjct: 352 TATSYNPVIARLC-KEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYI 410
Query: 292 LKEMVSKGICTPDDKKYLILTDMVHR 317
++ + +K C D ++T + +
Sbjct: 411 IQSLSNKQKCCTHDFYKSVITSLCRK 436
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 4/189 (2%)
Query: 110 DEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTY 169
+ + KA+ + M+S GI P YT L+ L + G A ++++M++ G + TY
Sbjct: 120 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 179
Query: 170 NTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKT 226
N L+ G ++ + + +++K + PN TY+ ++ + EA KL D++
Sbjct: 180 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 239
Query: 227 SGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVE 286
G +P+ +SYN+L+ G+ + G +A + E+ G +Y+ L+ L + E
Sbjct: 240 KGGEPNLVSYNVLLTGFC-KEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWE 298
Query: 287 QAEELLKEM 295
+A LL EM
Sbjct: 299 EANSLLAEM 307
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 93/193 (48%), Gaps = 6/193 (3%)
Query: 112 IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
+ + ++ + +++ G +P + T L+ L + R A +I+ M G+ D Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSG 228
L++ K + + + ++M + N +TYN ++ G C +++ + +++ G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 229 IKPDHLSYNLLI-AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
+ P+ +Y+ L+ A Y RG EA ++ DE++ G +P +Y+ L+ G +
Sbjct: 207 LAPNAFTYSFLLEAAYKERG--TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDD 264
Query: 288 AEELLKEMVSKGI 300
A L +E+ +KG
Sbjct: 265 AMALFRELPAKGF 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV---MYKE 64
P++ TY L+ H EQA ++LKEM + + ++ + SYN V + KE
Sbjct: 314 PSVVTYNILINSLAFHGRTEQALQVLKEMSKGNH-------QFRVTATSYNPVIARLCKE 366
Query: 65 GGLEEASDLLPEML------------------ELESGLVPHTLIYDTLIDE--CCTKGIG 104
G ++ L EM+ E S + I +L ++ CCT
Sbjct: 367 GKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFY 426
Query: 105 TKGSLDEIDKAVAYKD-----EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQE 159
K + EM G +P TY+ LI L G GA +++ M+E
Sbjct: 427 KSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEE 486
Query: 160 -KGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
+ K V +N ++ G K + D + +++ MVEK+ PN TY ++ G
Sbjct: 487 SENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEG 538
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 7/196 (3%)
Query: 103 IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEK-G 161
I + G+ ++V M GI P+++T+ L+ L + GR+ A D+ EM+ G
Sbjct: 145 IRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYG 204
Query: 162 LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQ 218
+ D YT+NTL++G+ K +D I+ +M P+++TYNT++ G CR + A
Sbjct: 205 VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAH 264
Query: 219 KLFDKM--KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
+ M K + + P+ +SY L+ GY + + EA V +ML G+ P TY+ LI
Sbjct: 265 NVLSGMLKKATDVHPNVVSYTTLVRGYCMKQE-IDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 277 LGLRINHEVEQAEELL 292
GL H ++ +++L
Sbjct: 324 KGLSEAHRYDEIKDIL 339
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 156/326 (47%), Gaps = 39/326 (11%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P T+ L+ G C + V++A + K+M+ D +V Y N+ + +
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPD--VVTY----NTIIDGLCRA 257
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G ++ A ++L ML+ + + P+ + Y TL+ C K EID+AV +M+S
Sbjct: 258 GKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMK--------QEIDEAVLVFHDMLS 309
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG------LKLDVYTYNTLMSGYAK 178
RG++P VTY LI+ L E R D IK++ G D T+N L+ +
Sbjct: 310 RGLKPNAVTYNTLIKGLSEAHRY----DEIKDILIGGNDAFTTFAPDACTFNILIKAHCD 365
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGI------ 229
++DA + ++ EM+ ++ P+ +Y+ ++ C +E A+ LF+++ +
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDE 425
Query: 230 -KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGI-DPTFTTYDALILGLRINHEVEQ 287
KP +YN + Y G K+A +V +++K G+ DP +Y LI G + +
Sbjct: 426 CKPLAAAYNPMFE-YLCANGKTKQAEKVFRQLMKRGVQDP--PSYKTLITGHCREGKFKP 482
Query: 288 AEELLKEMVSKGICTPDDKKYLILTD 313
A ELL M+ + PD + Y +L D
Sbjct: 483 AYELLVLMLRREF-VPDLETYELLID 507
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG---LKLDVYTYNTLMS 174
+ D + ++G ++ L++E L A + + ++ + +KL +N+L+
Sbjct: 87 FFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIR 146
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTM---MLGHCRCSEAQKLFDKM-KTSGIK 230
Y + ++ M + I P++LT+N++ +L R A LFD+M +T G+
Sbjct: 147 SYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVT 206
Query: 231 PDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEE 290
PD ++N LI G+ + V EAFR+ +M +P TY+ +I GL +V+ A
Sbjct: 207 PDSYTFNTLINGFC-KNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHN 265
Query: 291 LLKEMVSKG 299
+L M+ K
Sbjct: 266 VLSGMLKKA 274
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 12/202 (5%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEM-KRASDMSDSGLVRYAYSDNSYNF 59
ML + P +Y L+ C +E ++A+ L E+ ++ + A + N
Sbjct: 379 MLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFE 438
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ G ++A + ++++ P Y TLI C +G + A
Sbjct: 439 YLCANGKTKQAEKVFRQLMKRGVQDPPS---YKTLITGHCREG--------KFKPAYELL 487
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
M+ R P + TY LLI+ L ++G + A D ++ M T++++++ AK
Sbjct: 488 VLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKR 547
Query: 180 KYIDAHIGIYDEMVEKRIQPNL 201
K+ + + M+EKRI+ N+
Sbjct: 548 KFANESFCLVTLMLEKRIRQNI 569
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 128/264 (48%), Gaps = 21/264 (7%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P TY L+ GC + A +L EM + + +G+ + + + K+ +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKK-VKPTGV-----TFGTLIHGLCKDSRV 203
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
+EA + +ML++ G+ P IY +LI C G E+ A KDE I
Sbjct: 204 KEALKMKHDMLKV-YGVRPTVHIYASLIKALCQIG--------ELSFAFKLKDEAYEGKI 254
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
+ Y+ LI +L + GRS +++EM EKG K D TYN L++G+ ++
Sbjct: 255 KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANR 314
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHC----RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ DEMVEK ++P++++YN M+LG + EA LF+ M G PD LSY ++ G
Sbjct: 315 VLDEMVEKGLKPDVISYN-MILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDP 267
G +EA + DEML G P
Sbjct: 374 C-EGLQFEEAAVILDEMLFKGYKP 396
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 18/251 (7%)
Query: 56 SYNFVMY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEI 112
+YN +++ + G ++A L EM++ + P + + TLI C +
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVK--KKVKPTGVTFGTLIHGLCKDS--------RV 203
Query: 113 DKAVAYKDEMIS-RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
+A+ K +M+ G+ PT+ Y LI+AL ++G A + E E +K+D Y+T
Sbjct: 204 KEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYST 263
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSG 228
L+S K + I +EM EK +P+ +TYN ++ G C A ++ D+M G
Sbjct: 264 LISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG 323
Query: 229 IKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
+KPD +SYN+++ G +R +EA + ++M + G P +Y + GL + E+A
Sbjct: 324 LKPDVISYNMIL-GVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Query: 289 EELLKEMVSKG 299
+L EM+ KG
Sbjct: 383 AVILDEMLFKG 393
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 50/308 (16%)
Query: 50 YAYSDNSYNFVMYKEGGLEEASDLLPEMLEL--ESGLVPHTLIYDTLIDECCTKGIGTKG 107
+ YS Y+ ++ K GG + +L +L L ++ +VP +I+ +I+ +G
Sbjct: 43 FRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVIN------FFGRG 96
Query: 108 SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVY 167
L +A+ DEM + T+ + L+ AL + G ++ + + E G K D
Sbjct: 97 KLPS--RALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDAC 153
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKL-FDK 223
TYN L+ G ++ D + ++DEMV+K+++P +T+ T++ G C R EA K+ D
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 224 MKTSGIKPD---------------HLSYNLLIAGYSYRG-------------------GY 249
+K G++P LS+ + +Y G G
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYL 309
E + +EM + G P TY+ LI G + ++ E A +L EMV KG+ PD Y
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL-KPDVISYN 332
Query: 310 ILTDMVHR 317
++ + R
Sbjct: 333 MILGVFFR 340
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 12 TYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEAS 71
+Y +++ C + +A E+L ++ ++D+ + YN V G L++ S
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM---------YNTVFSALGKLKQIS 459
Query: 72 ---DLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIE 128
DL +M + G P Y+ LI + G + E+D+A+ +E+ +
Sbjct: 460 HIHDLFEKMKK--DGPSPDIFTYNILI--------ASFGRVGEVDEAINIFEELERSDCK 509
Query: 129 PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGI 188
P I++Y LI L + G A KEMQEKGL DV TY+TLM + K + ++ +
Sbjct: 510 PDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSL 569
Query: 189 YDEMVEKRIQPNLLTYNTM---MLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLL 239
++EM+ K QPN++TYN + + + R +EA L+ KMK G+ PD ++Y +L
Sbjct: 570 FEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
+Y ++E+L G++ A +M+ ++ EKG+ D YNT+ S K K I ++++M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 193 VEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
+ P++ TYN ++ R EA +F++++ S KPD +SYN LI + G
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLG-KNGD 527
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYL 309
V EA EM + G++P TY L+ VE A L +EM+ KG C P+ Y
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKG-CQPNIVTYN 586
Query: 310 ILTDMVHRE 318
IL D + +
Sbjct: 587 ILLDCLEKN 595
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 108/198 (54%), Gaps = 9/198 (4%)
Query: 121 EMISRGIEPTIVT----YTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
EM+S+ E +VT Y + AL ++ + D+ ++M++ G D++TYN L++ +
Sbjct: 428 EMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 177 AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM--LG-HCRCSEAQKLFDKMKTSGIKPDH 233
+ +D I I++E+ +P++++YN+++ LG + EA F +M+ G+ PD
Sbjct: 488 GRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDV 547
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
++Y+ L+ + + V+ A+ + +EML G P TY+ L+ L N +A +L
Sbjct: 548 VTYSTLMECFG-KTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYS 606
Query: 294 EMVSKGICTPDDKKYLIL 311
+M +G+ TPD Y +L
Sbjct: 607 KMKQQGL-TPDSITYTVL 623
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 16/172 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K G P I TY L+ EV++A + +E++R+ D ++ Y NS
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD--IISY----NSLINC 521
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K G ++EA EM E GL P + Y TL+ EC G + ++ A + +
Sbjct: 522 LGKNGDVDEAHVRFKEM--QEKGLNPDVVTYSTLM-ECF-------GKTERVEMAYSLFE 571
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTL 172
EM+ +G +P IVTY +L++ L + GR+ A D+ +M+++GL D TY L
Sbjct: 572 EMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 121/265 (45%), Gaps = 25/265 (9%)
Query: 68 EEASDLLP---------EMLELESGLVPHT----LIYDTLIDECCTKGIGTKGSL-DEID 113
+EAS++L E +L L P++ +Y+ +I I ++ +L D D
Sbjct: 100 DEASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRII------LILSRSNLPDRFD 153
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM 173
+ + D M+ + I T +LI F G + + ++ +++ LK++ +TY L+
Sbjct: 154 RVRSILDSMVKSNVHGNISTVNILI-GFF--GNTEDLQMCLRLVKKWDLKMNSFTYKCLL 210
Query: 174 SGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDH 233
Y + + +Y E+ + ++ YN ++ + +A ++F+ MK + D
Sbjct: 211 QAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDE 270
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
+Y ++I R G EA + +EM+ G+ Y+ L+ L V++A ++
Sbjct: 271 YTYTIMIRTMG-RIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFS 329
Query: 294 EMVSKGICTPDDKKYLILTDMVHRE 318
MV G C P++ Y +L +++ E
Sbjct: 330 RMVETG-CRPNEYTYSLLLNLLVAE 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 108 SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVY 167
+L + +KA ++M R TYT++I + +G+ A + EM +GL L+V
Sbjct: 247 ALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVV 306
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQ--------K 219
YNTLM AK K +D I ++ MVE +PN TY+ +L + +E Q +
Sbjct: 307 GYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYS--LLLNLLVAEGQLVRLDGVVE 364
Query: 220 LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL 279
+ + T GI Y+ L+ S + G+V EA R+ +M + +Y +++ L
Sbjct: 365 ISKRYMTQGI------YSYLVRTLS-KLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL 417
Query: 280 RINHEVEQAEELLKEMVSKGICT 302
+ +A E+L ++ KG+ T
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVT 440
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 43/244 (17%)
Query: 103 IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGL 162
I T G + + D+AV +EMI+ G+ +V Y L++ L + A + M E G
Sbjct: 277 IRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGC 336
Query: 163 KLDVYTYNTLMS---GYAKCKYIDAHI---------GIYDEMVEK-----------RIQP 199
+ + YTY+ L++ + +D + GIY +V R+
Sbjct: 337 RPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFC 396
Query: 200 NLL---------TYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRG 247
++ +Y +M+ C + EA ++ K+ G+ D + YN + +
Sbjct: 397 DMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSAL---- 452
Query: 248 GYVKEAFRVRD---EMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
G +K+ + D +M K+G P TY+ LI EV++A + +E+ + C PD
Sbjct: 453 GKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL-ERSDCKPD 511
Query: 305 DKKY 308
Y
Sbjct: 512 IISY 515
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 147/314 (46%), Gaps = 27/314 (8%)
Query: 4 VGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDS--GLVRYAYSDNSYNFVM 61
+G ++ T +++LGC ++++ EL KEM + S+ L+R A D
Sbjct: 174 MGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRCLIR-ALCDG------ 226
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
G + E +LL + L+ GL P +Y LI C IG + E+
Sbjct: 227 ---GDVSEGYELLKQ--GLKQGLDPGQYVYAKLISGFCE--IGNYACMSEVLHT------ 273
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
MI+ P++ Y +I+ L + A + K +++KG D Y T++ G+ + +
Sbjct: 274 MIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGW 333
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNL 238
+ + ++ EM++K ++PN YN M+ GH + E + +++M +G LS N
Sbjct: 334 LGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNT 393
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
+I G+ G EAF + M + G+ P TY+ALI G ++VE+ +L KE+ +
Sbjct: 394 MIKGFCSHGK-SDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKAL 452
Query: 299 GICTPDDKKYLILT 312
G+ P Y L
Sbjct: 453 GL-KPSGMAYAALV 465
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 19/242 (7%)
Query: 2 LKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM 61
LK G DP Y L+ G C E+L M + Y Y M
Sbjct: 240 LKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPS----MYIYQKIIKGLCM 295
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
K+ EA + + + G P ++Y T+I C KG + A E
Sbjct: 296 NKKQ--LEAYCIFKNLKD--KGYAPDRVVYTTMIRGFCEKGW--------LGSARKLWFE 343
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
MI +G+ P Y ++I F+ G E EM G + + NT++ G+
Sbjct: 344 MIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGK 403
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQ---KLFDKMKTSGIKPDHLSYNL 238
D I+ M E + PN +TYN ++ G C+ ++ + KL+ ++K G+KP ++Y
Sbjct: 404 SDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAA 463
Query: 239 LI 240
L+
Sbjct: 464 LV 465
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 146/306 (47%), Gaps = 34/306 (11%)
Query: 7 DPTITTYKALVLGC---CTHHEVEQAKELLKEMKRASDMSDSG--LVRYAYSDNSYNFVM 61
+ TI T+ + C C EV L+ M++ S++ G V Y S+NS M
Sbjct: 285 EATIRTFVHGIFRCLPPCKAFEV-----LVGFMEKDSNLQRVGYDAVLYCLSNNS----M 335
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
KE G L ++ E G +P + ++ + C KG ++ + D
Sbjct: 336 AKETG-----QFLRKIGE--RGYIPDSSTFNAAM-SCLLKG-------HDLVETCRIFDG 380
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
+SRG++P Y +L++AL R + +K+M GL VY+YN ++ K +
Sbjct: 381 FVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARR 440
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNL 238
I+ EM ++ I PNL+T+NT + G+ + +K + +K+ G KPD ++++L
Sbjct: 441 IENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSL 500
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
+I R +K+AF EML+ GI+P TY+ LI + +++ +L +M
Sbjct: 501 IINCLC-RAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKEN 559
Query: 299 GICTPD 304
G+ +PD
Sbjct: 560 GL-SPD 564
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
GL+ Y+ +ID C I+ A + EM RGI P +VT+ +
Sbjct: 420 GLLSSVYSYNAVIDCLCKA--------RRIENAAMFLTEMQDRGISPNLVTFNTFLSGYS 471
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
G +++++ G K DV T++ +++ + K I + EM+E I+PN +
Sbjct: 472 VRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEI 531
Query: 203 TYNTMMLGHCRCSEAQ---KLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
TYN ++ C + KLF KMK +G+ PD +YN I + + VK+A +
Sbjct: 532 TYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFC-KMRKVKKAEELLKT 590
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
ML+ G+ P TY LI L + +A E+ + G C PD
Sbjct: 591 MLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG-CVPD 634
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 19/246 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P Y LV + LK+M GL+ YS N+ + K
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM------GVDGLLSSVYSYNAVIDCLCKA 438
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
+E A+ L EM + G+ P+ + ++T + +G ++ K ++++
Sbjct: 439 RRIENAAMFLTEMQD--RGISPNLVTFNTFLSGYSVRG--------DVKKVHGVLEKLLV 488
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G +P ++T++L+I L A D KEM E G++ + TYN L+ D
Sbjct: 489 HGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDR 548
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ ++ +M E + P+L YN + C + +A++L M G+KPD+ +Y+ LI
Sbjct: 549 SVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIK 608
Query: 242 GYSYRG 247
S G
Sbjct: 609 ALSESG 614
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 19/238 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G ++ +Y A++ C +E A L EM+ D G+ + N++
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ------DRGISPNLVTFNTFLSGYSVR 473
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G +++ +L ++L G P + + +I+ C EI A EM+
Sbjct: 474 GDVKKVHGVLEKLLV--HGFKPDVITFSLIINCLCRA--------KEIKDAFDCFKEMLE 523
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
GIEP +TY +LI + G + + + +M+E GL D+Y YN + + K + +
Sbjct: 524 WGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKK 583
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLL 239
+ M+ ++P+ TY+T++ R SEA+++F ++ G PD + L+
Sbjct: 584 AEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 143/318 (44%), Gaps = 31/318 (9%)
Query: 5 GFDPTITTYKAL--VLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY 62
FDP ++L VLG + + + LL M+ ++ DSG Y SD ++
Sbjct: 101 NFDPVYAKDQSLKSVLG----NALFRKGPLLLSMELLKEIRDSG---YRISDELMCVLIG 153
Query: 63 KEGGLEEA---SDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
G L A +D+ ++ L G+ P T +Y+ +ID + +D A
Sbjct: 154 SWGRLGLAKYCNDVFAQISFL--GMKPSTRLYNAVIDALVKS--------NSLDLAYLKF 203
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+M S G +P TY +LI + + G A ++K+M+++G + +V+TY L+ G+
Sbjct: 204 QQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIA 263
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKM-----KTSGIKPDHL 234
+D + + M +++ PN T T + G RC K F+ + K S ++ +
Sbjct: 264 GRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQ--RV 321
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
Y+ ++ S KE + ++ + G P +T++A + L H++ + +
Sbjct: 322 GYDAVLYCLS-NNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDG 380
Query: 295 MVSKGICTPDDKKYLILT 312
VS+G+ P YL+L
Sbjct: 381 FVSRGV-KPGFNGYLVLV 397
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 142/322 (44%), Gaps = 35/322 (10%)
Query: 5 GFDPTITTYKALVLGCCTH---HEVEQAKELL-------------KEMKRASDMSDSGLV 48
F +T+Y +LV C+ +EV + L+ + R DS +
Sbjct: 55 NFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKGDSFEI 114
Query: 49 RYAYSDNSYNFVM---YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGT 105
+Y + YN ++ + G +EE L EMLE + P ++TL++ C G
Sbjct: 115 KYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLE--DLVSPDIYTFNTLVNGYCKLGY-- 170
Query: 106 KGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLD 165
+ +A Y +I G +P TYT I A + KEM + G +
Sbjct: 171 ------VVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRN 224
Query: 166 VYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFD 222
+Y L+ G + K ID + + +M + PN+ TY ++ C + SEA LF
Sbjct: 225 EVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFK 284
Query: 223 KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRIN 282
+M SGIKPD Y +LI + G + EA + + ML+NG+ P TY+ALI G
Sbjct: 285 QMSESGIKPDDCMYTVLIQSFC-SGDTLDEASGLLEHMLENGLMPNVITYNALIKGF-CK 342
Query: 283 HEVEQAEELLKEMVSKGICTPD 304
V +A LL +M+ + + PD
Sbjct: 343 KNVHKAMGLLSKMLEQNL-VPD 363
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 54/269 (20%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+++ G DP TY + + G C EV+ A ++ KEM + +G R S +
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEM------TQNGCHRNEVSYTQLIYG 234
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+++ ++EA LL +M + D CC
Sbjct: 235 LFEAKKIDEALSLLVKMKD----------------DNCC--------------------- 257
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
P + TYT+LI+AL G+ A ++ K+M E G+K D Y L+ +
Sbjct: 258 --------PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGD 309
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR--CSEAQKLFDKMKTSGIKPDHLSYNL 238
+D G+ + M+E + PN++TYN ++ G C+ +A L KM + PD ++YN
Sbjct: 310 TLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNLVPDLITYNT 369
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
LIAG G + A+R+ M ++G+ P
Sbjct: 370 LIAGQCSSGN-LDSAYRLLSLMEESGLVP 397
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 5/181 (2%)
Query: 134 YTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMV 193
Y L+ +L G + + EM E + D+YT+NTL++GY K Y+ ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 194 EKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYV 250
+ P+ TY + + GHCR E A K+F +M +G + +SY LI G + +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGL-FEAKKI 241
Query: 251 KEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLI 310
EA + +M + P TY LI L + + +A L K+M GI PDD Y +
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGI-KPDDCMYTV 300
Query: 311 L 311
L
Sbjct: 301 L 301
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 136 LLIEALFEVGRSWGAEDMIKEMQ-----EKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD 190
L+I++ V + D + M+ E KL YN L+S A+ ++ +Y
Sbjct: 85 LMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYT 144
Query: 191 EMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRG 247
EM+E + P++ T+NT++ G+C+ EA++ + +G PD+ +Y I G+ R
Sbjct: 145 EMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 248 GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKK 307
V AF+V EM +NG +Y LI GL ++++A LL +M C P+ +
Sbjct: 205 E-VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDN-CCPNVRT 262
Query: 308 YLILTD 313
Y +L D
Sbjct: 263 YTVLID 268
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 154/351 (43%), Gaps = 60/351 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+L G P + T+ L+ G C E+++A +L K M++ D L+ Y+ + Y
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD--LIAYSTLIDGY--- 331
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+K G L L + L G+ +++ + ID G D +V YK
Sbjct: 332 -FKAGMLGMGHKLFSQ--ALHKGVKLDVVVFSSTIDVYVKSG-------DLATASVVYK- 380
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M+ +GI P +VTYT+LI+ L + GR + A M ++ ++G++ + TY++L+ G+ KC
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 181 YIDAHIGIYDEMVE-----------------------------------KRIQPNLLTYN 205
+ + +Y++M++ + I+ N++ +N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 206 TMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKE-----AFRVR 257
+++ G CR + EA K+F M GIKPD ++ ++ + K ++
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLF 560
Query: 258 DEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
D M +N I + +I L H +E A + ++ +G PD Y
Sbjct: 561 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI-EGKMEPDIVTY 610
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 151/322 (46%), Gaps = 27/322 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+LK G +P+I TY +L+ G C + L ++M + D +V Y +
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD--VVIYGVLVDG---- 470
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K+G + A +ML L + +++++LID C L+ D+A+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRL--NVVVFNSLIDGWC--------RLNRFDEALKVFR 520
Query: 121 EMISRGIEPTIVTYTLLI------EALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
M GI+P + T+T ++ +A + + + MQ + D+ N ++
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 580
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKP 231
KC I+ ++ ++E +++P+++TYNTM+ G+C R EA+++F+ +K + P
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 640
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
+ ++ +LI + + A R+ M + G P TY L+ + ++E + +L
Sbjct: 641 NTVTLTILIHVLC-KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 292 LKEMVSKGICTPDDKKYLILTD 313
+EM KGI +P Y I+ D
Sbjct: 700 FEEMQEKGI-SPSIVSYSIIID 720
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 26/272 (9%)
Query: 5 GFDPTITTYKALVL------GCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYN 58
G P + T+ ++ C H + +L M+R +D + N
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC------NVVI 579
Query: 59 FVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
+++K +E+AS ++E + P + Y+T+I C SL +D+A
Sbjct: 580 HLLFKCHRIEDASKFFNNLIE--GKMEPDIVTYNTMICGYC--------SLRRLDEAERI 629
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
+ + P VT T+LI L + GA M M EKG K + TY LM ++K
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLS 235
I+ +++EM EK I P++++Y+ ++ G C R EA +F + + + PD ++
Sbjct: 690 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 749
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
Y +LI GY G V EA + + ML+NG+ P
Sbjct: 750 YAILIRGYCKVGRLV-EAALLYEHMLRNGVKP 780
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 112/214 (52%), Gaps = 5/214 (2%)
Query: 108 SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVY 167
S+D+I+ A ++ G P +VT+ LI + G A D+ K M+++G++ D+
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKM 224
Y+TL+ GY K + ++ + + K ++ +++ +++ + + + + A ++ +M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 225 KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHE 284
GI P+ ++Y +LI G + G + EAF + ++LK G++P+ TY +LI G
Sbjct: 383 LCQGISPNVVTYTILIKGLC-QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 285 VEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
+ L ++M+ G PD Y +L D + ++
Sbjct: 442 LRSGFALYEDMIKMGY-PPDVVIYGVLVDGLSKQ 474
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
Query: 110 DEIDKAVAYKDEMISRGIEPTIVT-YTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYT 168
D +D + D++ GIEP+ V+ + +++ALF G A D + + E+G ++ + +
Sbjct: 195 DRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVS 254
Query: 169 YNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFD---KMK 225
N ++ G + I+ + +++ PN++T+ T++ G C+ E + FD M+
Sbjct: 255 CNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313
Query: 226 TSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEV 285
GI+PD ++Y+ LI GY ++ G + ++ + L G+ + + I + ++
Sbjct: 314 QRGIEPDLIAYSTLIDGY-FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372
Query: 286 EQAEELLKEMVSKGICTPDDKKYLIL 311
A + K M+ +GI +P+ Y IL
Sbjct: 373 ATASVVYKRMLCQGI-SPNVVTYTIL 397
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 88/171 (51%), Gaps = 13/171 (7%)
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
L+EA + E+L++ + P+T+ LI C +++D A+ M +G
Sbjct: 623 LDEAERIF-ELLKV-TPFGPNTVTLTILIHVLCKN--------NDMDGAIRMFSIMAEKG 672
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
+P VTY L++ + G+ + +EMQEKG+ + +Y+ ++ G K +D
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHL 234
I+ + ++ ++ P+++ Y ++ G+C R EA L++ M +G+KPD L
Sbjct: 733 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 26/199 (13%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNF-----VM 61
+P I TY ++ G C+ +++A+ + + +K + N+ V+
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVT-----------PFGPNTVTLTILIHVL 652
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
K ++ A + M E G P+ + Y L+D +K + +GS + E
Sbjct: 653 CKNNDMDGAIRMFSIMAE--KGSKPNAVTYGCLMDWF-SKSVDIEGSFKLFE-------E 702
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M +GI P+IV+Y+++I+ L + GR A ++ + + L DV Y L+ GY K
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 762
Query: 182 IDAHIGIYDEMVEKRIQPN 200
+ +Y+ M+ ++P+
Sbjct: 763 LVEAALLYEHMLRNGVKPD 781
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 158/345 (45%), Gaps = 36/345 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M +V P + T L+ C V++A E+ ++M+ +D G V A S + +
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR--GKRTDDGNVIKADSIHFNTLI 377
Query: 61 --MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG-------IGTKGSLDE 111
+ K G L+EA +LL M +LE P+ + Y+ LID C G + ++ DE
Sbjct: 378 DGLCKVGRLKEAEELLVRM-KLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436
Query: 112 I--------------------DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
I + AV + +M G++ +VTY LI A V A
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
++M E G D Y L+SG + + I + +++ E +LL YN ++
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 212 CRCSEAQKLFD---KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
C + +K+++ M+ G KPD ++YN LI+ + + + R+ ++M ++G+DPT
Sbjct: 557 CDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF-ESVERMMEQMREDGLDPT 615
Query: 269 FTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
TTY A+I E+++A +L K+M P+ Y IL +
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILIN 660
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 149/339 (43%), Gaps = 63/339 (18%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P TY L+ G C ++E AKE++ MK + + + N+ M + GL
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMK------EDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
A +M + G+ + + Y TLI CC S+ ++KA+ + ++M+ G
Sbjct: 458 NMAVVFFMDMEK--EGVKGNVVTYMTLIHACC--------SVSNVEKAMYWYEKMLEAGC 507
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLD-------------------VY- 167
P Y LI L +V R A ++++++E G LD VY
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYE 567
Query: 168 ---------------TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC 212
TYNTL+S + K K ++ + ++M E + P + TY ++ +C
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 213 RCSE---AQKLFDKMKT-SGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
E A KLF M S + P+ + YN+LI +S G + +A +++EM + P
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF-GQALSLKEEMKMKMVRPN 686
Query: 269 FTTYDALILGLRINHEVEQAEELLK---EMVSKGICTPD 304
TY+AL L +E Q E LLK EMV + C P+
Sbjct: 687 VETYNALFKCL---NEKTQGETLLKLMDEMVEQS-CEPN 721
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 34/305 (11%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + C + A ++L SD+ + A N+ + +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDIL------SDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
+ +DL+ +M E++ + P + LI+ C +D+A+ ++M
Sbjct: 308 MDISRMNDLVLKMDEVK--IRPDVVTLGILINTLCKS--------RRVDEALEVFEKM-- 355
Query: 125 RG--------IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQ-EKGLKLDVYTYNTLMSG 175
RG I+ + + LI+ L +VGR AE+++ M+ E+ + TYN L+ G
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDG 415
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPD 232
Y + ++ + M E I+PN++T NT++ G CR + A F M+ G+K +
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL---RINHEVEQAE 289
++Y LI V++A ++ML+ G P Y ALI GL R +H+ +
Sbjct: 476 VVTYMTLIHACCSVSN-VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 290 ELLKE 294
E LKE
Sbjct: 535 EKLKE 539
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF + Y L+ C + E+ E+L +M++ DS + Y N+ K
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDS--ITY----NTLISFFGKH 594
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA-YKDEMI 123
E ++ +M E GL P Y +ID C+ G E+D+A+ +KD +
Sbjct: 595 KDFESVERMMEQMRE--DGLDPTVTTYGAVIDAYCSVG--------ELDEALKLFKDMGL 644
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
+ P V Y +LI A ++G A + +EM+ K ++ +V TYN L + +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMM 208
+ + DEMVE+ +PN +T +M
Sbjct: 705 TLLKLMDEMVEQSCEPNQITMEILM 729
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 140/311 (45%), Gaps = 30/311 (9%)
Query: 2 LKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM 61
++V P I + L+ C V++ + LL+ M+ R N++N +
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRH----------RVKPDANTFNVLF 275
Query: 62 Y---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
+ + ++A LL EM+E +G P Y ID C G+ +D+A
Sbjct: 276 FGWCRVRDPKKAMKLLEEMIE--AGHKPENFTYCAAIDTFCQAGM--------VDEAADL 325
Query: 119 KDEMISRGIE---PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
D MI++G PT T+ L+I AL + ++ ++I M G DV TY ++ G
Sbjct: 326 FDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEG 385
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPD 232
+ +D DEM K P+++TYN + C + EA KL+ +M S P
Sbjct: 386 MCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPS 445
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELL 292
+YN+LI+ + + AF EM K TY A+I GL H ++A LL
Sbjct: 446 VQTYNMLISMF-FEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLL 504
Query: 293 KEMVSKGICTP 303
+E+V+KG+ P
Sbjct: 505 EEVVNKGLKLP 515
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 17/235 (7%)
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVG 145
P ++ L+D C G+ +G A M R ++P T+ +L V
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGE--------ALLRRMRHR-VKPDANTFNVLFFGWCRVR 282
Query: 146 RSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEK---RIQPNLL 202
A +++EM E G K + +TY + + + +D ++D M+ K P
Sbjct: 283 DPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK 342
Query: 203 TYNTMMLGHCRCSEAQKLFD---KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
T+ M++ + +A++ F+ +M ++G PD +Y +I G V EA++ DE
Sbjct: 343 TFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCM-AEKVDEAYKFLDE 401
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDM 314
M G P TY+ + L N + ++A +L MV + C P + Y +L M
Sbjct: 402 MSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMV-ESRCAPSVQTYNMLISM 455
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P ++TYK ++ G C +V++A + L E MS+ G + N + V
Sbjct: 367 MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDE------MSNKGYPPDIVTYNCFLRV 420
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ + +EA L M +ES P Y+ L I +D+ D A
Sbjct: 421 LCENRKTDEALKLYGRM--VESRCAPSVQTYNML--------ISMFFEMDDPDGAFNTWT 470
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM 173
EM R + TY +I LF+ R+ A +++E+ KGLKL +++ +
Sbjct: 471 EMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 140/297 (47%), Gaps = 21/297 (7%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEG 65
F I Y+ V + E +E+L+E + +MS G V A N Y V G
Sbjct: 67 FRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFV--ARIINLYGRV----G 120
Query: 66 GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISR 125
E A + EM E L ++ L++ C + +K D ++ +K+
Sbjct: 121 MFENAQKVFDEMPERNCKRT--ALSFNALLNAC----VNSK-KFDLVEGI--FKELPGKL 171
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM-SGYAKCKYIDA 184
IEP + +Y LI+ L G A +I E++ KGLK D T+N L+ Y K K+ +
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
I+ MVEK ++ ++ +YN +LG + E LFDK+K + +KPD ++ +I
Sbjct: 232 E-QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIK 290
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
G+ G + EA E+ KNG P +++L+ + ++E A EL KE+ +K
Sbjct: 291 GFVSEGK-LDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK 346
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 131/278 (47%), Gaps = 32/278 (11%)
Query: 27 EQAKELLKEMK----RASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELES 82
E A+++ EM + + +S + L+ + ++ V EG +E LP L +E
Sbjct: 123 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLV---EGIFKE----LPGKLSIE- 174
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
P Y+TLI KG+ KGS E AVA DE+ ++G++P +T+ +L+ +
Sbjct: 175 ---PDVASYNTLI-----KGLCGKGSFTE---AVALIDEIENKGLKPDHITFNILLHESY 223
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
G+ E + M EK +K D+ +YN + G A + + ++D++ ++P++
Sbjct: 224 TKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVF 283
Query: 203 TYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
T+ M+ G + EA + +++ +G +P +N L+ + G ++ A+ + E
Sbjct: 284 TFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAIC-KAGDLESAYELCKE 342
Query: 260 MLKNG--IDPTF--TTYDALILGLRINHEVEQAEELLK 293
+ +D DAL+ G + E E+ EL K
Sbjct: 343 IFAKRLLVDEAVLQEVVDALVKGSK-QDEAEEIVELAK 379
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 139/305 (45%), Gaps = 37/305 (12%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY-KE 64
F I Y V + +E+L+E K+ DMS G S +Y K
Sbjct: 70 FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIIS-------LYGKA 122
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G E A + EM + L ++ L+ S + K +E+ +
Sbjct: 123 GMFENAQKVFEEMPNRDCKR--SVLSFNALL------------SAYRLSKKFDVVEELFN 168
Query: 125 R-----GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT-LMSGYAK 178
I+P IV+Y LI+AL E A ++ E++ KGLK D+ T+NT L+S Y K
Sbjct: 169 ELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLK 228
Query: 179 CKYIDAHIG--IYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDH 233
++ +G I+ +MVEK + ++ TYN +LG + E LF ++K SG+KPD
Sbjct: 229 GQF---ELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDV 285
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
S+N +I G S G + EA E++K+G P T+ L+ + + E A EL K
Sbjct: 286 FSFNAMIRG-SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
Query: 294 EMVSK 298
E SK
Sbjct: 345 ETFSK 349
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 16/230 (6%)
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
+EE + LP L ++ P + Y+TLI C K D + +AVA DE+ ++G
Sbjct: 163 VEELFNELPGKLSIK----PDIVSYNTLIKALCEK--------DSLPEAVALLDEIENKG 210
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
++P IVT+ L+ + + G+ E++ +M EK + +D+ TYN + G A +
Sbjct: 211 LKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELV 270
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
++ E+ ++P++ ++N M+ G + EA+ + ++ G +PD ++ LL+
Sbjct: 271 NLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAM 330
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
G + + A + E TT L+ L + E+AEE++K
Sbjct: 331 CKAGDF-ESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE----AQKLFDKMKTS 227
++S Y K + +++EM + + ++L++N ++ + R S+ ++LF+++
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY-RLSKKFDVVEELFNELPGK 173
Query: 228 -GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVE 286
IKPD +SYN LI + + EA + DE+ G+ P T++ L+L + + E
Sbjct: 174 LSIKPDIVSYNTLIKALCEKDS-LPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 287 QAEELLKEMVSKGIC 301
EE+ +MV K +
Sbjct: 233 LGEEIWAKMVEKNVA 247
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 139/304 (45%), Gaps = 26/304 (8%)
Query: 2 LKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM 61
LK F P + TY L+ G C + + L++ + +DM D GL + N VM
Sbjct: 289 LKERFTPNMMTYTVLLNGWC------RVRNLIEAARIWNDMIDHGLKPDIVAHN----VM 338
Query: 62 YKEGGLE--EASDLLPEMLELES-GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
EG L + SD + ++S G P+ Y +I + C + ++ A+ Y
Sbjct: 339 L-EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS--------SMETAIEY 389
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
D+M+ G++P YT LI + +++KEMQEKG D TYN L+ A
Sbjct: 390 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN 449
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH--CRCSE-AQKLFDKMKTSGIKPDHLS 235
K + IY++M++ I+P++ T+N +M + R E + ++D+M GI PD S
Sbjct: 450 QKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNS 509
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y +LI G G +EA R +EML G+ Y+ + E EEL +
Sbjct: 510 YTVLIRGL-ISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRA 568
Query: 296 VSKG 299
G
Sbjct: 569 KFSG 572
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 13/236 (5%)
Query: 79 ELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLI 138
+L+ P+ + Y L++ C + + +A ++MI G++P IV + +++
Sbjct: 288 KLKERFTPNMMTYTVLLNGWC--------RVRNLIEAARIWNDMIDHGLKPDIVAHNVML 339
Query: 139 EALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQ 198
E L + A + M+ KG +V +Y ++ + K ++ I +D+MV+ +Q
Sbjct: 340 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
Query: 199 PNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFR 255
P+ Y ++ G + +L +M+ G PD +YN LI + + + R
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ-KMPEHGTR 458
Query: 256 VRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
+ ++M++N I+P+ T++ ++ + E + EM+ KGIC PDD Y +L
Sbjct: 459 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC-PDDNSYTVL 513
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 40/246 (16%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
+ + V+ +EM ++G+ T+ T+T+ ++A A + + M++ K+ V T N
Sbjct: 209 QFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETIN 267
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTS 227
L+ + K ++D++ E R PN++TY ++ G CR EA ++++ M
Sbjct: 268 CLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH 326
Query: 228 GIKPDHLSYNLLIAGY--------------------------SY--------RGGYVKEA 253
G+KPD +++N+++ G SY + ++ A
Sbjct: 327 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 386
Query: 254 FRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
D+M+ +G+ P Y LI G +++ ELLKEM KG PD K Y L
Sbjct: 387 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG-HPPDGKTYNALIK 445
Query: 314 MVHRER 319
++ ++
Sbjct: 446 LMANQK 451
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 139/304 (45%), Gaps = 26/304 (8%)
Query: 2 LKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM 61
LK F P + TY L+ G C + + L++ + +DM D GL + N VM
Sbjct: 290 LKERFTPNMMTYTVLLNGWC------RVRNLIEAARIWNDMIDHGLKPDIVAHN----VM 339
Query: 62 YKEGGLE--EASDLLPEMLELES-GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
EG L + SD + ++S G P+ Y +I + C + ++ A+ Y
Sbjct: 340 L-EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS--------SMETAIEY 390
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
D+M+ G++P YT LI + +++KEMQEKG D TYN L+ A
Sbjct: 391 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN 450
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH--CRCSE-AQKLFDKMKTSGIKPDHLS 235
K + IY++M++ I+P++ T+N +M + R E + ++D+M GI PD S
Sbjct: 451 QKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNS 510
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y +LI G G +EA R +EML G+ Y+ + E EEL +
Sbjct: 511 YTVLIRGL-ISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRA 569
Query: 296 VSKG 299
G
Sbjct: 570 KFSG 573
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 13/236 (5%)
Query: 79 ELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLI 138
+L+ P+ + Y L++ C + + +A ++MI G++P IV + +++
Sbjct: 289 KLKERFTPNMMTYTVLLNGWC--------RVRNLIEAARIWNDMIDHGLKPDIVAHNVML 340
Query: 139 EALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQ 198
E L + A + M+ KG +V +Y ++ + K ++ I +D+MV+ +Q
Sbjct: 341 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 199 PNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFR 255
P+ Y ++ G + +L +M+ G PD +YN LI + + + R
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ-KMPEHGTR 459
Query: 256 VRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
+ ++M++N I+P+ T++ ++ + E + EM+ KGIC PDD Y +L
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC-PDDNSYTVL 514
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 40/246 (16%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
+ + V+ +EM ++G+ T+ T+T+ ++A A + + M++ K+ V T N
Sbjct: 210 QFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETIN 268
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTS 227
L+ + K ++D++ E R PN++TY ++ G CR EA ++++ M
Sbjct: 269 CLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH 327
Query: 228 GIKPDHLSYNLLIAGY--------------------------SY--------RGGYVKEA 253
G+KPD +++N+++ G SY + ++ A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 254 FRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
D+M+ +G+ P Y LI G +++ ELLKEM KG PD K Y L
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG-HPPDGKTYNALIK 446
Query: 314 MVHRER 319
++ ++
Sbjct: 447 LMANQK 452
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 150/310 (48%), Gaps = 21/310 (6%)
Query: 2 LKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM 61
L+ G P + TY LV C + +A E+L++M D +V Y N YN
Sbjct: 236 LQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPD--IVTYNSLVN-YNC-- 290
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
+ G LEE + ++ +L GL +T+ Y+TL+ C+ DE+++ + +
Sbjct: 291 -RRGNLEEVASVIQHILS--HGLELNTVTYNTLLHSLCSHEY-----WDEVEEIL---NI 339
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M PT++TY +LI L + A D +M E+ D+ TYNT++ +K
Sbjct: 340 MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGM 399
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNL 238
+D I + + P L+TYN+++ G + +A +L+ +M +GI PD ++
Sbjct: 400 VDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRS 459
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
LI G+ R V+EA +V E G +TY +I GL E+E A E+++ M++
Sbjct: 460 LIYGFC-RANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTG 518
Query: 299 GICTPDDKKY 308
G C PD+ Y
Sbjct: 519 G-CKPDETIY 527
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 136/308 (44%), Gaps = 21/308 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P TY ++ C + A LL+ DMS SG + N+
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLE------DMSLSGSPPDVITYNTVIRC 218
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
M+ G E+A + +L++G P + Y L++ C + G+ +A+ +
Sbjct: 219 MFDYGNAEQAIRFWKD--QLQNGCPPFMITYTVLVELVC-RYCGSA-------RAIEVLE 268
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+M G P IVTY L+ G +I+ + GL+L+ TYNTL+ +
Sbjct: 269 DMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHE 328
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYN 237
Y D I + M + P ++TYN ++ G C+ S A F +M PD ++YN
Sbjct: 329 YWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYN 388
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
++ S + G V +A + + P TY+++I GL +++A EL +M+
Sbjct: 389 TVLGAMS-KEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLD 447
Query: 298 KGICTPDD 305
GI PDD
Sbjct: 448 AGI-FPDD 454
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 5/224 (2%)
Query: 99 CTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQ 158
C+ + +D++DKA+ M+ G P +TY ++I L + G A ++++M
Sbjct: 142 CSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMS 201
Query: 159 EKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR-CSEA 217
G DV TYNT++ + I + + ++ P ++TY ++ CR C A
Sbjct: 202 LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA 261
Query: 218 Q--KLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDAL 275
+ ++ + M G PD ++YN L+ Y+ R G ++E V +L +G++ TY+ L
Sbjct: 262 RAIEVLEDMAVEGCYPDIVTYNSLV-NYNCRRGNLEEVASVIQHILSHGLELNTVTYNTL 320
Query: 276 ILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
+ L + ++ EE+L M C P Y IL + + + R
Sbjct: 321 LHSLCSHEYWDEVEEILNIMYQTSYC-PTVITYNILINGLCKAR 363
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 28/255 (10%)
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
G++P+T Y+ L+ C D++ A +M+ R + P + +Y +LI+
Sbjct: 185 GVMPNTRSYNLLMQAFCLN--------DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFC 236
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
G+ GA +++ +M KG D +Y TL++ + + + M K P+L+
Sbjct: 237 RKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLV 296
Query: 203 TYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
YNTM+LG C R +A+K+ D M ++G P+ +SY LI G +G + E + +E
Sbjct: 297 HYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF-DEGKKYLEE 355
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLK--------------EMVSKGICTPD- 304
M+ G P F+ + L+ G +VE+A ++++ EMV IC D
Sbjct: 356 MISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE 415
Query: 305 -DKKYLILTDMVHRE 318
+K L L D V E
Sbjct: 416 SEKIKLFLEDAVKEE 430
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 150 AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMML 209
A ++ K + G+ + +YN LM + + ++ +M+E+ + P++ +Y ++
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
Query: 210 GHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID 266
G CR + A +L D M G PD LSY L+ R ++EA+++ M G +
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLC-RKTQLREAYKLLCRMKLKGCN 292
Query: 267 PTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
P Y+ +ILG A ++L +M+S G C+P+ Y L
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNG-CSPNSVSYRTL 336
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 77/222 (34%), Gaps = 51/222 (22%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ P + +YK L+ G C +V A ELL +M
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDM------------------------ 251
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
L G VP L Y TL++ C K ++ +A
Sbjct: 252 -------------------LNKGFVPDRLSYTTLLNSLCRK--------TQLREAYKLLC 284
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M +G P +V Y +I R+ A ++ +M G + +Y TL+ G
Sbjct: 285 RMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQG 344
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFD 222
D +EM+ K P+ N ++ G C + ++ D
Sbjct: 345 MFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACD 386
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM-- 208
+D++ + + G L + L+ YA+ K + + + +M+E P N ++
Sbjct: 104 DDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDV 163
Query: 209 -LGH-CRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID 266
+ H +A +LF + G+ P+ SYNLL+ + + A+++ +ML+ +
Sbjct: 164 LVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDD-LSIAYQLFGKMLERDVV 222
Query: 267 PTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
P +Y LI G +V A ELL +M++KG PD Y L + + R+
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGF-VPDRLSYTTLLNSLCRK 273
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 27/307 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G P + L+ C V A+E + K G+V A +Y+ +
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK------GFGIVPSA---KTYSIL 214
Query: 61 MYKEGGLEEAS---DLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ + +AS + EMLE V L Y+ L+D C G ++D
Sbjct: 215 VRGWARIRDASGARKVFDEMLE--RNCVVDLLAYNALLDALCKSG--------DVDGGYK 264
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
EM + G++P ++ + I A + G A ++ M+ L +VYT+N ++
Sbjct: 265 MFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLC 324
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM---LGHCRCSEAQKLFDKMKTSGIKPDHL 234
K + +D + DEM++K P+ TYN++M HC + A KL +M + PD
Sbjct: 325 KNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRH 384
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL-RINHEVEQAEELLK 293
+YN+++ R G A + + M + PT TY +I GL R ++E+A +
Sbjct: 385 TYNMVLK-LLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFE 443
Query: 294 EMVSKGI 300
M+ +GI
Sbjct: 444 MMIDEGI 450
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 5/192 (2%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+ M+ GI+P + L+ +L + A++ + + G+ TY+ L+ G+A+
Sbjct: 162 NRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARI 221
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQ---KLFDKMKTSGIKPDHLSY 236
+ ++DEM+E+ +LL YN ++ C+ + K+F +M G+KPD S+
Sbjct: 222 RDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSF 281
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
+ I Y G V A++V D M + + P T++ +I L N +V+ A LL EM+
Sbjct: 282 AIFIHAYC-DAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 297 SKGICTPDDKKY 308
KG PD Y
Sbjct: 341 QKG-ANPDTWTY 351
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 137/304 (45%), Gaps = 26/304 (8%)
Query: 2 LKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM 61
LK F P + TY L+ G C + + L++ + +DM D GL + N VM
Sbjct: 290 LKERFTPNMMTYTVLLNGWC------RVRNLIEAARIWNDMIDQGLKPDIVAHN----VM 339
Query: 62 YKEGGL--EEASDLLPEMLELES-GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
EG L + SD + ++S G P+ Y +I + C + ++ A+ Y
Sbjct: 340 L-EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS--------SMETAIEY 390
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
D+M+ G++P YT LI + +++KEMQEKG D TYN L+ A
Sbjct: 391 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN 450
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLS 235
K + IY++M++ I+P++ T+N +M + + ++++M GI PD S
Sbjct: 451 QKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNS 510
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y +LI G G +EA R +EML G+ Y+ + E EEL +
Sbjct: 511 YTVLIRGLIGEGK-SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRA 569
Query: 296 VSKG 299
G
Sbjct: 570 KFSG 573
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 116/236 (49%), Gaps = 13/236 (5%)
Query: 79 ELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLI 138
+L+ P+ + Y L++ C + + +A ++MI +G++P IV + +++
Sbjct: 289 KLKERFTPNMMTYTVLLNGWC--------RVRNLIEAARIWNDMIDQGLKPDIVAHNVML 340
Query: 139 EALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQ 198
E L + A + M+ KG +V +Y ++ + K ++ I +D+MV+ +Q
Sbjct: 341 EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 199 PNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFR 255
P+ Y ++ G + +L +M+ G PD +YN LI + + + A R
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ-KMPEHATR 459
Query: 256 VRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
+ ++M++N I+P+ T++ ++ + E + +EM+ KGIC PDD Y +L
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC-PDDNSYTVL 514
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 40/246 (16%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
+ + V+ +EM ++G+ T+ T+T+ ++A A + + M++ K+ V T N
Sbjct: 210 QFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETIN 268
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTS 227
L+ + K ++D++ E R PN++TY ++ G CR EA ++++ M
Sbjct: 269 CLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQ 327
Query: 228 GIKPDHLSYNLLIAGY--------------------------SY--------RGGYVKEA 253
G+KPD +++N+++ G SY + ++ A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 254 FRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
D+M+ +G+ P Y LI G +++ ELLKEM KG PD K Y L
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG-HPPDGKTYNALIK 446
Query: 314 MVHRER 319
++ ++
Sbjct: 447 LMANQK 452
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 145/320 (45%), Gaps = 19/320 (5%)
Query: 3 KVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY 62
+G P + LV C + ++ A +++EMKR+ + + D ++
Sbjct: 189 NLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMD-----CLF 243
Query: 63 KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEM 122
+EA +L +M+ E G+ P + ++ +I+ C G E+++A D M
Sbjct: 244 AHSRSKEAVELFEDMISKE-GISPDPVTFNVMINGFCRAG--------EVERAKKILDFM 294
Query: 123 ISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYI 182
G P + Y+ L+ +VG+ A+ E+++ GLKLD Y TLM+ + +
Sbjct: 295 KKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGET 354
Query: 183 DAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLL 239
D + + EM R + + LTYN ++ G R EA ++ D+ + G+ + SY ++
Sbjct: 355 DEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRII 414
Query: 240 IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ G +++A + M + GI P T++ L++ L + E +L + G
Sbjct: 415 LNALCC-NGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIG 473
Query: 300 ICTPDDKKYLILTDMVHRER 319
+ P K + + + + +ER
Sbjct: 474 L-IPGPKSWGAVVESICKER 492
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 145/314 (46%), Gaps = 30/314 (9%)
Query: 9 TITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL- 67
TI + L+ + E+E+AK A DM NS +F + +G L
Sbjct: 150 TIQSLNTLINVLVDNGELEKAKSFFDG---AKDMR--------LRPNSVSFNILIKGFLD 198
Query: 68 ----EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMI 123
E A + EMLE+E + P + Y++LI C D++ KA + ++MI
Sbjct: 199 KCDWEAACKVFDEMLEME--VQPSVVTYNSLIGFLCRN--------DDMGKAKSLLEDMI 248
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
+ I P VT+ LL++ L G A+ ++ +M+ +G K + Y LMS K ID
Sbjct: 249 KKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRID 308
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTM---MLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
+ EM ++RI+P+++ YN + + CR EA ++ +M+ G KP+ +Y ++I
Sbjct: 309 EAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G+ R V + ML + PT T+ ++ GL ++ A +L+ M K +
Sbjct: 369 DGFC-RIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
Query: 301 CTPDDKKYLILTDM 314
+L+D+
Sbjct: 428 SFGSGAWQNLLSDL 441
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 7/211 (3%)
Query: 107 GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDV 166
G +DKA+ ++ S TI + LI L + G A+ ++ L+ +
Sbjct: 127 GKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNS 186
Query: 167 YTYNTLMSGYA-KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFD 222
++N L+ G+ KC + +A ++DEM+E +QP+++TYN+++ CR +A+ L +
Sbjct: 187 VSFNILIKGFLDKCDW-EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLE 245
Query: 223 KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRIN 282
M I+P+ +++ LL+ G +G Y EA ++ +M G P Y L+ L
Sbjct: 246 DMIKKRIRPNAVTFGLLMKGLCCKGEY-NEAKKLMFDMEYRGCKPGLVNYGILMSDLGKR 304
Query: 283 HEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
+++A+ LL EM + I PD Y IL +
Sbjct: 305 GRIDEAKLLLGEMKKRRI-KPDVVIYNILVN 334
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 28/216 (12%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML++ P++ TY +L+ C + ++ +AK LL++M ++ N+ F
Sbjct: 212 MLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDM-----------IKKRIRPNAVTFG 260
Query: 61 MYK-----EGGLEEASDLLPEMLELE-SGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDK 114
+ +G EA L M ++E G P + Y L+ + +G +G +DE
Sbjct: 261 LLMKGLCCKGEYNEAKKL---MFDMEYRGCKPGLVNYGILMSD-----LGKRGRIDE--- 309
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A EM R I+P +V Y +L+ L R A ++ EMQ KG K + TY ++
Sbjct: 310 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMID 369
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
G+ + + D+ + + + M+ R P T+ M+ G
Sbjct: 370 GFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAG 405
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 143/305 (46%), Gaps = 17/305 (5%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
MLK G P + ++ ++ G C ++ A +LL +M MS + + A + NS
Sbjct: 244 MLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGM---MSGNFVSPNAVTYNSVING 300
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G L+ A + +M++ SG+ + Y L+D G GS DE A+ D
Sbjct: 301 FCKAGRLDLAERIRGDMVK--SGVDCNERTYGALVD-----AYGRAGSSDE---ALRLCD 350
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM S+G+ V Y ++ LF G GA ++++M K +++D +T ++ G +
Sbjct: 351 EMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNG 410
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
Y+ + ++ EK++ +++ +NT+M R + A ++ M G+ D +S+
Sbjct: 411 YVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFG 470
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI GY + G ++ A + D M+K Y++++ GL AE ++ M
Sbjct: 471 TLIDGY-LKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI 529
Query: 298 KGICT 302
K I T
Sbjct: 530 KDIVT 534
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH 185
G P + + L+ A + G + GA ++I++ + +G + V+ N M ID
Sbjct: 145 GSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 186 IGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAG 242
+Y EM N+ T+N ++ C+ S EA +F +M G+ P+ +S+N++I G
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 243 YSYRGGYVKEAFRVRDE---MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ + G ++ A ++ + M N + P TY+++I G ++ AE + +MV G
Sbjct: 263 -ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSG 321
Query: 300 ICTPDDKKYLILTDMVHR 317
+ +++ Y L D R
Sbjct: 322 V-DCNERTYGALVDAYGR 338
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 17/233 (7%)
Query: 66 GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISR 125
G E +L +M G P+ + Y L++ G + + A A M S
Sbjct: 157 GAERVLSVLSKM-----GSTPNVISYTALMESYGRGG--------KCNNAEAIFRRMQSS 203
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM---QEKGLKLDVYTYNTLMSGYAKCKYI 182
G EP+ +TY ++++ E + AE++ + + ++ LK D Y+ ++ Y K
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 183 DAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAG 242
+ ++ MV K + + +TYN++M E K++D+M+ S I+PD +SY LLI
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKA 323
Query: 243 YSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y R +EA V +EML G+ PT Y+ L+ I+ VEQA+ + K M
Sbjct: 324 YG-RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 110/239 (46%), Gaps = 14/239 (5%)
Query: 56 SYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKA 115
+YN +M E +E S + +M S + P + Y LI G ++A
Sbjct: 284 TYNSLMSFETSYKEVSKIYDQMQR--SDIQPDVVSYALLIKAY--------GRARREEEA 333
Query: 116 VAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
++ +EM+ G+ PT Y +L++A G A+ + K M+ + D+++Y T++S
Sbjct: 334 LSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 393
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKL---FDKMKTSGIKPD 232
Y ++ + + +PN++TY T++ G+ + ++ +K+ ++KM+ SGIK +
Sbjct: 394 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 453
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
++ S R A EM G+ P + L+ E+E+A+EL
Sbjct: 454 QTILTTIMDA-SGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 134/305 (43%), Gaps = 28/305 (9%)
Query: 3 KVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM- 61
K+G P + +Y AL+ + A+ + + M+ +S S + +Y ++
Sbjct: 167 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ-SSGPEPSAI--------TYQIILK 217
Query: 62 -YKEG-GLEEASDLLPEML-ELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
+ EG +EA ++ +L E +S L P +Y +I G +KA
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG--------NYEKARKV 269
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
M+ +G+ + VTY L+ FE + +MQ ++ DV +Y L+ Y +
Sbjct: 270 FSSMVGKGVPQSTVTYNSLMS--FETSYK-EVSKIYDQMQRSDIQPDVVSYALLIKAYGR 326
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLS 235
+ + + +++EM++ ++P YN ++ +A+ +F M+ I PD S
Sbjct: 327 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWS 386
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y +++ Y ++ A + + +G +P TY LI G ++VE+ E+ ++M
Sbjct: 387 YTTMLSAY-VNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Query: 296 VSKGI 300
GI
Sbjct: 446 RLSGI 450
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 52/278 (18%)
Query: 73 LLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIV 132
LL EM+ G P+T+ Y+ LI + G + +++A+ ++M G +P V
Sbjct: 386 LLDEMVR--DGCQPNTVTYNRLIH--------SYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
TY LI+ + G A DM + MQ GL D +TY+ +++ K ++ A ++ EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 193 VEKRIQPNLLTYNTMM-------------------------------------LGHCR-C 214
V++ PNL+TYN MM LGHC
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
EA+ +F +M+ PD Y LL+ + + G V++A++ ML G+ P T ++
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDLWG-KAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 275 LILG-LRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
L+ LR+N ++ +A ELL+ M++ G+ P + Y +L
Sbjct: 615 LLSTFLRVN-KIAEAYELLQNMLALGL-RPSLQTYTLL 650
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 9/220 (4%)
Query: 100 TKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQE 159
T +G G + DEM+ G +P VTY LI + A ++ +MQE
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 160 KGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM-----LGHCRC 214
G K D TY TL+ +AK ++D + +Y M + P+ TY+ ++ GH
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH--L 485
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
A KLF +M G P+ ++YN+++ ++ Y + A ++ +M G +P TY
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNY-QNALKLYRDMQNAGFEPDKVTYSI 544
Query: 275 LILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDM 314
++ L +E+AE + EM K PD+ Y +L D+
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNW-IPDEPVYGLLVDL 583
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 158 QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC--- 214
++ G K D +TY T++ + K A + DEMV QPN +TYN ++ + R
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
+EA +F++M+ +G KPD ++Y LI ++ + G++ A + M G+ P TY
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHA-KAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 275 LILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
+I L + A +L EMV +G CTP+ Y I+ D+ + R
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMMDLHAKAR 518
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 123/309 (39%), Gaps = 53/309 (17%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF TY +V + +LL EM R D V Y +SY Y
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR--DGCQPNTVTYNRLIHSYGRANY-- 414
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
L EA ++ +M E +G P + Y TLID G +D A+ M +
Sbjct: 415 --LNEAMNVFNQMQE--AGCKPDRVTYCTLIDIHAKAGF--------LDIAMDMYQRMQA 462
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G+ P TY+++I L + G A + EM ++G ++ TYN +M +AK +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMM--LGHCR-CSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ +Y +M +P+ +TY+ +M LGHC EA+ +F +M+ PD Y LL+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 242 GYSYRGGY----------------------------------VKEAFRVRDEMLKNGIDP 267
+ G + EA+ + ML G+ P
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 268 TFTTYDALI 276
+ TY L+
Sbjct: 643 SLQTYTLLL 651
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
TYT ++ L + ++ EM G + + TYN L+ Y + Y++ + ++++M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 193 VEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
E +P+ +TY T++ H + A ++ +M+ G+ PD +Y+++I + G+
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG-KAGH 484
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYL 309
+ A ++ EM+ G P TY+ ++ + A +L ++M + G PD Y
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF-EPDKVTYS 543
Query: 310 ILTDMV 315
I+ +++
Sbjct: 544 IVMEVL 549
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 115/233 (49%), Gaps = 17/233 (7%)
Query: 66 GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISR 125
G E +L +M G P+ + Y L++ + G G K + A A M S
Sbjct: 164 GAERVLSVLSKM-----GSTPNVISYTALME---SYGRGGK-----CNNAEAIFRRMQSS 210
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM---QEKGLKLDVYTYNTLMSGYAKCKYI 182
G EP+ +TY ++++ E + AE++ + + ++ LK D Y+ ++ Y K
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 183 DAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAG 242
+ ++ MV K + + +TYN++M E K++D+M+ S I+PD +SY LLI
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKA 330
Query: 243 YSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y R +EA V +EML G+ PT Y+ L+ I+ VEQA+ + K M
Sbjct: 331 YG-RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 111/242 (45%), Gaps = 14/242 (5%)
Query: 53 SDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEI 112
S +YN +M E +E S + +M S + P + Y LI G
Sbjct: 288 STVTYNSLMSFETSYKEVSKIYDQMQR--SDIQPDVVSYALLIK--------AYGRARRE 337
Query: 113 DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTL 172
++A++ +EM+ G+ PT Y +L++A G A+ + K M+ + D+++Y T+
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 173 MSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKL---FDKMKTSGI 229
+S Y ++ + + +PN++TY T++ G+ + ++ +K+ ++KM+ SGI
Sbjct: 398 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Query: 230 KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAE 289
K + ++ S R A EM G+ P + L+ E+E+A+
Sbjct: 458 KANQTILTTIMDA-SGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAK 516
Query: 290 EL 291
EL
Sbjct: 517 EL 518
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 134/305 (43%), Gaps = 28/305 (9%)
Query: 3 KVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM- 61
K+G P + +Y AL+ + A+ + + M+ +S S + +Y ++
Sbjct: 174 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ-SSGPEPSAI--------TYQIILK 224
Query: 62 -YKEG-GLEEASDLLPEML-ELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
+ EG +EA ++ +L E +S L P +Y +I G +KA
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG--------NYEKARKV 276
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
M+ +G+ + VTY L+ FE + +MQ ++ DV +Y L+ Y +
Sbjct: 277 FSSMVGKGVPQSTVTYNSLMS--FETSYK-EVSKIYDQMQRSDIQPDVVSYALLIKAYGR 333
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLS 235
+ + + +++EM++ ++P YN ++ +A+ +F M+ I PD S
Sbjct: 334 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWS 393
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y +++ Y ++ A + + +G +P TY LI G ++VE+ E+ ++M
Sbjct: 394 YTTMLSAY-VNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452
Query: 296 VSKGI 300
GI
Sbjct: 453 RLSGI 457
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 52/278 (18%)
Query: 73 LLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIV 132
LL EM+ G P+T+ Y+ LI + G + +++A+ ++M G +P V
Sbjct: 386 LLDEMVR--DGCQPNTVTYNRLIH--------SYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
TY LI+ + G A DM + MQ GL D +TY+ +++ K ++ A ++ EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 193 VEKRIQPNLLTYNTMM-------------------------------------LGHCR-C 214
V++ PNL+TYN MM LGHC
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
EA+ +F +M+ PD Y LL+ + + G V++A++ ML G+ P T ++
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDLWG-KAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 275 LILG-LRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
L+ LR+N ++ +A ELL+ M++ G+ P + Y +L
Sbjct: 615 LLSTFLRVN-KIAEAYELLQNMLALGL-RPSLQTYTLL 650
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 9/220 (4%)
Query: 100 TKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQE 159
T +G G + DEM+ G +P VTY LI + A ++ +MQE
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 160 KGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM-----LGHCRC 214
G K D TY TL+ +AK ++D + +Y M + P+ TY+ ++ GH
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH--L 485
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
A KLF +M G P+ ++YN+++ ++ Y + A ++ +M G +P TY
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNY-QNALKLYRDMQNAGFEPDKVTYSI 544
Query: 275 LILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDM 314
++ L +E+AE + EM K PD+ Y +L D+
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNW-IPDEPVYGLLVDL 583
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 158 QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC--- 214
++ G K D +TY T++ + K A + DEMV QPN +TYN ++ + R
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
+EA +F++M+ +G KPD ++Y LI ++ + G++ A + M G+ P TY
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHA-KAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 275 LILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
+I L + A +L EMV +G CTP+ Y I+ D+ + R
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMMDLHAKAR 518
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 123/309 (39%), Gaps = 53/309 (17%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF TY +V + +LL EM R D V Y +SY Y
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR--DGCQPNTVTYNRLIHSYGRANY-- 414
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
L EA ++ +M E +G P + Y TLID G +D A+ M +
Sbjct: 415 --LNEAMNVFNQMQE--AGCKPDRVTYCTLIDIHAKAGF--------LDIAMDMYQRMQA 462
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G+ P TY+++I L + G A + EM ++G ++ TYN +M +AK +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMM--LGHCR-CSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ +Y +M +P+ +TY+ +M LGHC EA+ +F +M+ PD Y LL+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 242 GYSYRGGY----------------------------------VKEAFRVRDEMLKNGIDP 267
+ G + EA+ + ML G+ P
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 268 TFTTYDALI 276
+ TY L+
Sbjct: 643 SLQTYTLLL 651
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
TYT ++ L + ++ EM G + + TYN L+ Y + Y++ + ++++M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 193 VEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
E +P+ +TY T++ H + A ++ +M+ G+ PD +Y+++I + G+
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG-KAGH 484
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYL 309
+ A ++ EM+ G P TY+ ++ + A +L ++M + G PD Y
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF-EPDKVTYS 543
Query: 310 ILTDMV 315
I+ +++
Sbjct: 544 IVMEVL 549
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 52/278 (18%)
Query: 73 LLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIV 132
LL EM+ G P+T+ Y+ LI + G + +++A+ ++M G +P V
Sbjct: 386 LLDEMVR--DGCQPNTVTYNRLIH--------SYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
TY LI+ + G A DM + MQ GL D +TY+ +++ K ++ A ++ EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 193 VEKRIQPNLLTYNTMM-------------------------------------LGHCR-C 214
V++ PNL+TYN MM LGHC
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
EA+ +F +M+ PD Y LL+ + + G V++A++ ML G+ P T ++
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDLWG-KAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 275 LILG-LRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
L+ LR+N ++ +A ELL+ M++ G+ P + Y +L
Sbjct: 615 LLSTFLRVN-KIAEAYELLQNMLALGL-RPSLQTYTLL 650
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 9/220 (4%)
Query: 100 TKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQE 159
T +G G + DEM+ G +P VTY LI + A ++ +MQE
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 160 KGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM-----LGHCRC 214
G K D TY TL+ +AK ++D + +Y M + P+ TY+ ++ GH
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH--L 485
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
A KLF +M G P+ ++YN+++ ++ Y + A ++ +M G +P TY
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNY-QNALKLYRDMQNAGFEPDKVTYSI 544
Query: 275 LILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDM 314
++ L +E+AE + EM K PD+ Y +L D+
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNW-IPDEPVYGLLVDL 583
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 158 QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC--- 214
++ G K D +TY T++ + K A + DEMV QPN +TYN ++ + R
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDA 274
+EA +F++M+ +G KPD ++Y LI ++ + G++ A + M G+ P TY
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHA-KAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 275 LILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
+I L + A +L EMV +G CTP+ Y I+ D+ + R
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMMDLHAKAR 518
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 123/309 (39%), Gaps = 53/309 (17%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF TY +V + +LL EM R D V Y +SY Y
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR--DGCQPNTVTYNRLIHSYGRANY-- 414
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
L EA ++ +M E +G P + Y TLID G +D A+ M +
Sbjct: 415 --LNEAMNVFNQMQE--AGCKPDRVTYCTLIDIHAKAGF--------LDIAMDMYQRMQA 462
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G+ P TY+++I L + G A + EM ++G ++ TYN +M +AK +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMM--LGHCR-CSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ +Y +M +P+ +TY+ +M LGHC EA+ +F +M+ PD Y LL+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 242 GYSYRGGY----------------------------------VKEAFRVRDEMLKNGIDP 267
+ G + EA+ + ML G+ P
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 268 TFTTYDALI 276
+ TY L+
Sbjct: 643 SLQTYTLLL 651
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
TYT ++ L + ++ EM G + + TYN L+ Y + Y++ + ++++M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 193 VEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
E +P+ +TY T++ H + A ++ +M+ G+ PD +Y+++I + G+
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG-KAGH 484
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYL 309
+ A ++ EM+ G P TY+ ++ + A +L ++M + G PD Y
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF-EPDKVTYS 543
Query: 310 ILTDMV 315
I+ +++
Sbjct: 544 IVMEVL 549
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 4/161 (2%)
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M GI P T+ +L +D +++M+E+G + D+ TYNTL+S Y +
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNL 238
+ +Y M +R+ P+L+TY +++ G C R EA + F +M GIKPD +SYN
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL 279
LI Y + G ++++ ++ EML N + P T ++ G
Sbjct: 347 LIYAYC-KEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
G+ P+T ++ L + C + E+D + ++M G EP +VTY L+ +
Sbjct: 231 GIHPNTYTFNILTNVFCNDS-----NFREVDD---FLEKMEEEGFEPDLVTYNTLVSSYC 282
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
GR A + K M + + D+ TY +L+ G K + + MV++ I+P+ +
Sbjct: 283 RRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 203 TYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
+YNT++ +C+ +++KL +M + + PD + +++ G+ R G + A E
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF-VREGRLLSAVNFVVE 401
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
+ + +D F D LI+ L + A+ LL ++
Sbjct: 402 LRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRII 438
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Query: 132 VTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDE 191
V + +L++ ++G + +E+ + G + V T N L++G K ++ +Y
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 192 MVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGG 248
M I PN T+N + C S E +KM+ G +PD ++YN L++ Y R G
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC-RRG 285
Query: 249 YVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
+KEAF + M + + P TY +LI GL + V +A + MV +GI PD Y
Sbjct: 286 RLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI-KPDCMSY 344
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 157 MQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKR----IQPNLLTYNTMMLGHC 212
M G+ + YT+N L + + D++ D+ +EK +P+L+TYNT++ +C
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCN----DSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC 282
Query: 213 ---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTF 269
R EA L+ M + PD ++Y LI G + G V+EA + M+ GI P
Sbjct: 283 RRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLC-KDGRVREAHQTFHRMVDRGIKPDC 341
Query: 270 TTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
+Y+ LI ++Q+++LL EM+ + PD
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV-VPD 375
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 124/294 (42%), Gaps = 25/294 (8%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
GF+P + TY LV C +++A L K M R + D LV Y S + K+
Sbjct: 266 GFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPD--LVTYT----SLIKGLCKD 319
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G + EA M ++ G+ P + Y+TLI C +G+ + ++ EM+
Sbjct: 320 GRVREAHQTFHRM--VDRGIKPDCMSYNTLIYAYCKEGM--------MQQSKKLLHEMLG 369
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+ P T +++E GR A + + E++ + + + L+ + A
Sbjct: 370 NSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFA 429
Query: 185 HIGIYDEMVEK---RIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYNL 238
+ D ++E+ +P TYN ++ RC EA L K+K D +Y
Sbjct: 430 AKHLLDRIIEEEGHEAKPE--TYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRA 487
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELL 292
LI G R G +EA + EM + + P AL+ G + ++AE LL
Sbjct: 488 LI-GCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLL 540
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 116/277 (41%), Gaps = 50/277 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDS--------GLVRYAY 52
M+ G P +Y L+ C ++Q+K+LL EM S + D G VR
Sbjct: 332 MVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
Query: 53 SDNSYNFV---------------------MYKEGGLEEASDLLPEMLELESGLVPHTLIY 91
++ NFV + +EG A LL ++E E G Y
Sbjct: 392 LLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIE-EEGHEAKPETY 450
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
+ LI+ + D I++A+ K ++ ++ TY LI L +GR+ AE
Sbjct: 451 NNLIE--------SLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAE 502
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID---AHIGIYDEMVEKRI-QPNLLTYNTM 207
++ EM + +K D + L+ GY CK +D A + +E RI P +YN++
Sbjct: 503 SLMAEMFDSEVKPDSFICGALVYGY--CKELDFDKAERLLSLFAMEFRIFDPE--SYNSL 558
Query: 208 MLGHCRC----SEAQKLFDKMKTSGIKPDHLSYNLLI 240
+ C +A +L ++M+ G P+ L+ LI
Sbjct: 559 VKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLI 595
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 147/334 (44%), Gaps = 66/334 (19%)
Query: 28 QAKELLKEM-------------KRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLL 74
QA ++LK+M KR G + Y+ N K+ G E + LL
Sbjct: 328 QANQVLKQMDNYANALGFFYWLKRQPGFKHDG---HTYTTMVGNLGRAKQFG--EINKLL 382
Query: 75 PEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTY 134
EM+ G P+T+ Y+ LI + G + + +A+ ++M G EP VTY
Sbjct: 383 DEMVR--DGCKPNTVTYNRLIH--------SYGRANYLKEAMNVFNQMQEAGCEPDRVTY 432
Query: 135 TLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVE 194
LI+ + G A DM + MQE GL D +TY+ +++ K ++ A ++ EMV
Sbjct: 433 CTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVG 492
Query: 195 KRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRG---- 247
+ PNL+T+N M+ H + A KL+ M+ +G +PD ++Y++++ + G
Sbjct: 493 QGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEE 552
Query: 248 ------------------------------GYVKEAFRVRDEMLKNGIDPTFTTYDALIL 277
G V +A++ ML+ G+ P T ++L+
Sbjct: 553 AEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLS 612
Query: 278 GLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
H + +A LL+ M++ G+ P + Y +L
Sbjct: 613 TFLRVHRMSEAYNLLQSMLALGL-HPSLQTYTLL 645
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 129/280 (46%), Gaps = 22/280 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G P TY L+ + +++A + +M+ A D R Y + +
Sbjct: 385 MVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPD----RVTYC--TLIDI 438
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G L+ A D+ M E +GL P T Y +I+ C +G G L +
Sbjct: 439 HAKAGFLDIAMDMYQRMQE--AGLSPDTFTYSVIIN--C---LGKAGHLPAAHRLFC--- 488
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSW-GAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
EM+ +G P +VT+ ++I AL R++ A + ++MQ G + D TY+ +M C
Sbjct: 489 EMVGQGCTPNLVTFNIMI-ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 547
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTM--MLGHC-RCSEAQKLFDKMKTSGIKPDHLSY 236
+++ G++ EM K P+ Y + + G +A + + M +G++P+ +
Sbjct: 548 GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTC 607
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
N L++ + R + EA+ + ML G+ P+ TY L+
Sbjct: 608 NSLLSTF-LRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 134/306 (43%), Gaps = 27/306 (8%)
Query: 12 TYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEAS 71
T ++ C + +AKE E+K + G V Y N+ V K G EA
Sbjct: 283 TCSTVLSACAREGLLREAKEFFAELKSCG--YEPGTVTY----NALLQVFGKAGVYTEAL 336
Query: 72 DLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTI 131
+L EM E + ++ Y+ L+ G +A + M +G+ P
Sbjct: 337 SVLKEMEE--NSCPADSVTYNELVAAYVRAGFS--------KEAAGVIEMMTKKGVMPNA 386
Query: 132 VTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDE 191
+TYT +I+A + G+ A + M+E G + TYN ++S K + I + +
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 192 MVEKRIQPNLLTYNTMMLGHCRCSE------AQKLFDKMKTSGIKPDHLSYNLLIAGYSY 245
M PN T+NTM+ C ++F +MK+ G +PD ++N LI+ Y
Sbjct: 447 MKSNGCSPNRATWNTML---ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGR 503
Query: 246 RGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDD 305
G V +A ++ EM + G + TTY+AL+ L + E ++ +M SKG P +
Sbjct: 504 CGSEV-DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF-KPTE 561
Query: 306 KKYLIL 311
Y ++
Sbjct: 562 TSYSLM 567
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 143/318 (44%), Gaps = 43/318 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMK----RASDMSDSGLVRYAYSDNS 56
M + GF+ +TTY AL+ + + ++ +MK + ++ S S +++ +
Sbjct: 517 MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Query: 57 YNFVMYKEGGLEEASDLLPEMLELES------------------------GLVPHTLIYD 92
Y + E ++E + P + L + G P +I++
Sbjct: 577 YLGIERIENRIKEG-QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFN 635
Query: 93 TLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAED 152
+++ I T+ ++ D+A + + G+ P +VTY L++ G W AE+
Sbjct: 636 SMLS------IFTRNNM--YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 153 MIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC 212
++K +++ LK D+ +YNT++ G+ + + + + EM E+ I+P + TYNT + G+
Sbjct: 688 ILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT 747
Query: 213 RC---SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTF 269
+E + + + M + +P+ L++ +++ GY R G EA ++ DP F
Sbjct: 748 AMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYC-RAGKYSEAMDFVSKI--KTFDPCF 804
Query: 270 TTYDALILGLRINHEVEQ 287
L LR+ +E
Sbjct: 805 DDQSIQRLALRVRENLES 822
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 125/289 (43%), Gaps = 41/289 (14%)
Query: 63 KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTK---GSLDE-------- 111
+ G E+A DL M E+ G P + Y+ ++D G + G LDE
Sbjct: 222 RTGKYEKAIDLFERMKEM--GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKF 279
Query: 112 -----------------IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMI 154
+ +A + E+ S G EP VTY L++ + G A ++
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 155 KEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC 214
KEM+E D TYN L++ Y + + G+ + M +K + PN +TY T++ + +
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 215 S---EAQKLFDKMKTSGIKPDHLSYNLLIA--GYSYRGGYVKEAFRVRDEMLKNGIDPTF 269
EA KLF MK +G P+ +YN +++ G R E ++ +M NG P
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS---NEMIKMLCDMKSNGCSPNR 456
Query: 270 TTYDALILGLRINHEVEQ-AEELLKEMVSKGICTPDDKKYLILTDMVHR 317
T++ + L L N +++ + +EM S G PD + L R
Sbjct: 457 ATWNTM-LALCGNKGMDKFVNRVFREMKSCGF-EPDRDTFNTLISAYGR 503
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 153/347 (44%), Gaps = 58/347 (16%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K G P TY ++ + ++A +L MK A + ++ +YN V
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC---------TYNAV 427
Query: 61 MYKEGGLEEASDLLPEMLELES-GLVPHTLIYDTLIDECCTKGI---------------- 103
+ G +++++ + +++S G P+ ++T++ C KG+
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGF 487
Query: 104 --------------GTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWG 149
G GS E+D + Y EM G + TY L+ AL G
Sbjct: 488 EPDRDTFNTLISAYGRCGS--EVDASKMY-GEMTRAGFNACVTTYNALLNALARKGDWRS 544
Query: 150 AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQ-----PNLLTY 204
E++I +M+ KG K +Y+ ++ YAK ++GI E +E RI+ P+ +
Sbjct: 545 GENVISDMKSKGFKPTETSYSLMLQCYAKG---GNYLGI--ERIENRIKEGQIFPSWMLL 599
Query: 205 NTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML 261
T++L + +C + +++ F K G KPD + +N +++ ++ R +A + + +
Sbjct: 600 RTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFT-RNNMYDQAEGILESIR 658
Query: 262 KNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
++G+ P TY++L+ E +AEE+LK + K PD Y
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL-EKSQLKPDLVSY 704
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 14/252 (5%)
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
V K LE++ L EMLE G+ P + T+I C + G +AV +
Sbjct: 184 VFRKSKDLEKSEKLFDEMLE--RGIKPDNATFTTIIS--CARQNGVP------KRAVEWF 233
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
++M S G EP VT +I+A G A + + + ++D T++TL+ Y
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMM--LGHC-RCSEAQKLFDKMKTSGIKPDHLSY 236
D + IY+EM ++PNL+ YN ++ +G R +A+ ++ + T+G P+ +Y
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
L+ Y R Y +A + EM + G+ T Y+ L+ N V++A E+ ++M
Sbjct: 354 AALVRAYG-RARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMK 412
Query: 297 SKGICTPDDKKY 308
+ C PD +
Sbjct: 413 NCETCDPDSWTF 424
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+EM + G++P +V Y LI+++ R W A+ + K++ G + TY L+ Y +
Sbjct: 304 EEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRA 363
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR----CSEAQKLFDKMKT-SGIKPDHL 234
+Y D + IY EM EK + ++ YNT +L C EA ++F MK PD
Sbjct: 364 RYGDDALAIYREMKEKGLSLTVILYNT-LLSMCADNRYVDEAFEIFQDMKNCETCDPDSW 422
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
+++ LI Y+ G V EA +M + G +PT ++I +V+ +
Sbjct: 423 TFSSLITVYAC-SGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQ 481
Query: 295 MVSKGICTPDDK 306
++ GI TPDD+
Sbjct: 482 VLELGI-TPDDR 492
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 36/305 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G + TY L+ G + + +LL+ MK SG+ A N+
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMK------TSGVAPNAVVYNTLLHA 226
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K G + A L+ EM E P+ + ++ LI C + ++ +++ +
Sbjct: 227 LCKNGKVGRARSLMSEMKE------PNDVTFNILISAYCNE--------QKLIQSMVLLE 272
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+ S G P +VT T ++E L GR A ++++ ++ KG K+DV NTL+ GY
Sbjct: 273 KCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALG 332
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
+ + EM K PN+ TYN ++ G+C A F+ MKT I+ + ++N
Sbjct: 333 KMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFN 392
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNG-------IDPTFTTYDALILGLRINHEVEQAEE 290
LI G S GG + ++ EM+++ IDP Y+ +I G + E A E
Sbjct: 393 TLIRGLSI-GGRTDDGLKIL-EMMQDSDTVHGARIDP----YNCVIYGFYKENRWEDALE 446
Query: 291 LLKEM 295
L +M
Sbjct: 447 FLLKM 451
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 148/334 (44%), Gaps = 61/334 (18%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P Y L+ C + +V +A+ L+ EMK +D++ + L+ AY + E
Sbjct: 212 GVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILIS-AYCN---------E 261
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
L ++ LL + L G VP + +++ C +G + +A+ + + S
Sbjct: 262 QKLIQSMVLLEKCFSL--GFVPDVVTVTKVMEVLCNEG--------RVSEALEVLERVES 311
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+G + +V L++ +G+ A+ EM+ KG +V TYN L++GY +D+
Sbjct: 312 KGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDS 371
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS----GIKPDHLSYN 237
+ +++M I+ N T+NT++ G R + K+ + M+ S G + D YN
Sbjct: 372 ALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID--PYN 429
Query: 238 LLIAGYSYRGGY-----------------VKEAFRVRDEMLKNGIDPTFTTYDALI---- 276
+I G+ + V +F++ K G+D T YD +I
Sbjct: 430 CVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGG 489
Query: 277 -LGLRINH----------EVEQAEELLKEMVSKG 299
+ ++H ++E++ EL+ +MV++G
Sbjct: 490 VPSIIVSHCLIHRYSQHGKIEESLELINDMVTRG 523
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 17/230 (7%)
Query: 73 LLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIV 132
LL EM + GL P I+ T+I +G G + L I + ++ D + GI+P++
Sbjct: 98 LLDEMPD-SIGLPPDDAIFVTII-----RGFG-RARL--IKRVISVVDLVSKFGIKPSLK 148
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
+ +++ L + E ++M G+ DVYTY LM G + I + M
Sbjct: 149 VFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIM 208
Query: 193 VEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
+ PN + YNT++ C + A+ L +MK +P+ +++N+LI+ Y
Sbjct: 209 KTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKL 264
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ ++ + ++ G P T ++ L V +A E+L+ + SKG
Sbjct: 265 I-QSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 114/275 (41%), Gaps = 48/275 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMK----------------------R 38
M + G+ P + TY L+ G C ++ A + +MK R
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGR 403
Query: 39 ASD-------MSDSGLVRYAYSDNSYNFVMY---KEGGLEEASDLLPEMLELESGLVPHT 88
D M DS V A D YN V+Y KE E+A + L +M +L V +
Sbjct: 404 TDDGLKILEMMQDSDTVHGARID-PYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRS 462
Query: 89 LIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSW 148
LI C KG +D++ A D+MI G P+I+ LI + G+
Sbjct: 463 F---KLISLC------EKGGMDDLKTAY---DQMIGEGGVPSIIVSHCLIHRYSQHGKIE 510
Query: 149 GAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM 208
+ ++I +M +G T+N ++ G+ K + I ++M E+ P+ +YN ++
Sbjct: 511 ESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLL 570
Query: 209 LGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLI 240
C + QK LF +M I PD ++ L+
Sbjct: 571 EELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 138/286 (48%), Gaps = 22/286 (7%)
Query: 26 VEQAKELLKEMKRASDMSDSGLV------RYAYSDNSYNFVMYKE----GGLEEASDLLP 75
++ + LL + R ++SD+G + +Y + S+N V+ G EA +
Sbjct: 232 IDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWM 291
Query: 76 EMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYT 135
EM + G+ + Y ++I C +KG GSL+++ K D M IEP Y
Sbjct: 292 EMGNV--GVKHDVVSYSSMIS-CYSKG----GSLNKVLKLF---DRMKKECIEPDRKVYN 341
Query: 136 LLIEALFEVGRSWGAEDMIKEMQE-KGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVE 194
++ AL + A +++K M+E KG++ +V TYN+L+ K + + ++DEM+E
Sbjct: 342 AVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLE 401
Query: 195 KRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAF 254
K + P + TY+ M E +L KM+ G +P +Y +LI R
Sbjct: 402 KGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLC-RWRDFDNVL 460
Query: 255 RVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ DEM + + P ++Y +I GL +N ++E+A KEM KG+
Sbjct: 461 LLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGM 506
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 19/182 (10%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G +P + TY +L+ C + E+AK++ EM + GL + +++ ++ +
Sbjct: 368 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEM------LEKGLFPTIRTYHAFMRIL-RT 420
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G EE +LL +M ++ G P Y LI + C + D + DEM
Sbjct: 421 G--EEVFELLAKMRKM--GCEPTVETYIMLIRKLC--------RWRDFDNVLLLWDEMKE 468
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+ + P + +Y ++I LF G+ A KEM++KG++ + + + S ++ +Y +
Sbjct: 469 KTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQ 528
Query: 185 HI 186
I
Sbjct: 529 RI 530
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 26/204 (12%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K +P Y A+V V +A+ L+K M+ + G+ + NS
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTME-----EEKGIEPNVVTYNSLIKP 382
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K EEA + EMLE GL P Y + I G +E+ + +A
Sbjct: 383 LCKARKTEEAKQVFDEMLE--KGLFPTIRTYHAFMR------ILRTG--EEVFELLA--- 429
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMI----KEMQEKGLKLDVYTYNTLMSGY 176
+M G EPT+ TY +LI L W D + EM+EK + D+ +Y ++ G
Sbjct: 430 KMRKMGCEPTVETYIMLIRKLCR----WRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGL 485
Query: 177 AKCKYIDAHIGIYDEMVEKRIQPN 200
I+ G Y EM +K ++PN
Sbjct: 486 FLNGKIEEAYGYYKEMKDKGMRPN 509
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 143/307 (46%), Gaps = 20/307 (6%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGG 66
+ ++ YK + G C E E+A L+ E+ ++ L R F E
Sbjct: 242 NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDL-RAVLGMVVRGFC--NEMK 298
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
++ A ++ EM E+ GL + + +ID C + +A+ + D+M+ +G
Sbjct: 299 MKAAESVIIEMEEIGFGLDVYACL--AVIDRYCKNM--------NLPEALGFLDKMLGKG 348
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
++ V +L+++ ++ A + KE ++ + LD YN +K ++
Sbjct: 349 LKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAF 408
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ EM ++ I P+++ Y T++ G+C + +A L D+M +G+ PD ++YN+L++G
Sbjct: 409 ELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGL 468
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
+ R G+ +E + + M G P T +I GL +V++AE+ + K P
Sbjct: 469 A-RNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK---CP 524
Query: 304 DDKKYLI 310
++K +
Sbjct: 525 ENKASFV 531
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 133/305 (43%), Gaps = 55/305 (18%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVR----YAYSDNSYN-- 58
G P T ++ G C +V++A++ +++ + + V+ S +Y
Sbjct: 488 GPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAF 547
Query: 59 ----------------FVMYKEGGLEEASDLLPEM--LELESGLVPHTLIYDTLIDECCT 100
F + EG LE+A D+L +M +E G C
Sbjct: 548 VRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPG------------RSMCG 595
Query: 101 KGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEK 160
K IG L+ + +A D M+ RG+ P + TYT++I + AE + ++M+++
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQR 655
Query: 161 GLKLDVYTYNTLMSGYAK--------CKYIDAHIG------IYDEMVEKRIQPNLLTYNT 206
G+K DV TY L+ Y K C + +G + E I +++ Y
Sbjct: 656 GIKPDVVTYTVLLDRYLKLDPEHHETCS-VQGEVGKRKASEVLREFSAAGIGLDVVCYTV 714
Query: 207 MMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKN 263
++ C+ + +A +LFD+M SG++PD ++Y LI+ Y +R GY+ A + E+ K
Sbjct: 715 LIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSY-FRKGYIDMAVTLVTELSKK 773
Query: 264 GIDPT 268
P+
Sbjct: 774 YNIPS 778
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 119/288 (41%), Gaps = 67/288 (23%)
Query: 92 DTLIDECC-TKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
+ +D C L +++A EM RGI P ++ YT LI+ G+ A
Sbjct: 383 NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDA 442
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
D+I EM G+ D+ TYN L+SG A+ + + + IY+ M + +PN +T + ++ G
Sbjct: 443 LDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEG 502
Query: 211 HC---RCSEAQKLFDKM-------KTSGIKP--------------------------DHL 234
C + EA+ F + K S +K L
Sbjct: 503 LCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKL 562
Query: 235 SYNLLIAGY------------SYR------------GGY-----VKEAFRVRDEMLKNGI 265
++L I GY +YR G + V+EA + D M++ G+
Sbjct: 563 FFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGL 622
Query: 266 DPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
P TY +I +E+++AE L ++M +GI PD Y +L D
Sbjct: 623 IPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI-KPDVVTYTVLLD 669
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 134 YTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMV 193
++L IE E A D++K+M ++ ++ + K + ++D MV
Sbjct: 564 FSLCIEGYLE-----KAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV 618
Query: 194 EKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYV 250
E+ + P+L TY M+ +CR +E QK LF+ MK GIKPD ++Y +L+ Y
Sbjct: 619 ERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEH 678
Query: 251 KEAFRVRDEMLKNGIDPTFTTYDALILGLRI------------NHEVEQAEELLKEMVSK 298
E V+ E+ K + A +GL + + +EQA EL M+
Sbjct: 679 HETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDS 738
Query: 299 GICTPDDKKYLILTDMVHRE 318
G+ PD Y L R+
Sbjct: 739 GL-EPDMVAYTTLISSYFRK 757
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSG-----LVRYAYSDN 55
M++ G P + TY ++ C +E+++A+ L ++MK+ D L RY D
Sbjct: 617 MVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDP 676
Query: 56 SYNFVMYKEG--GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEID 113
++ +G G +AS++L E GL + Y LID C ++ ++
Sbjct: 677 EHHETCSVQGEVGKRKASEVLREFSAAGIGL--DVVCYTVLIDRQC--------KMNNLE 726
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEK 160
+A D MI G+EP +V YT LI + F G A ++ E+ +K
Sbjct: 727 QAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 153/348 (43%), Gaps = 40/348 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+++ G P Y ++ G C E++ +LL EMK D+G+ ++ N
Sbjct: 465 IVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMK------DAGVEPSQFTLNCIYGC 518
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG-----------IGTKGSL 109
+ + A DLL +M G P L+ + C G + +G L
Sbjct: 519 LAERCDFVGALDLLKKMRFY--GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFL 576
Query: 110 DEIDKAVA-----YKDEMISRGIE-----------PTIVTYTLLIEALFEVGRSWGAEDM 153
+ + A K+E + RG+E P ++ Y +LI+AL + R+ A+ +
Sbjct: 577 GHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADIL 636
Query: 154 IKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC- 212
EM KGLK V TYN+++ G+ K ID + M E P+++TY +++ G C
Sbjct: 637 FNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCA 696
Query: 213 --RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFT 270
R SEA +++MK P+ +++ LI G + G+ EA EM + ++P
Sbjct: 697 SGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLC-KCGWSGEALVYFREMEEKEMEPDSA 755
Query: 271 TYDALILGLRINHEVEQAEELLKEMVSKG-ICTPDDKKYLILTDMVHR 317
Y +L+ + + + +EMV KG D+ Y++ ++ +
Sbjct: 756 VYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSK 803
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 137/349 (39%), Gaps = 61/349 (17%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGL------------- 47
M ++G + I Y L+ G C H ++E A L E+KR+ D G+
Sbjct: 309 MRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESE 368
Query: 48 ----------------------------VRYAYSDNSYNFVMYKEGGLEEASDLLPEMLE 79
+R +Y+F+ G E SD + E+++
Sbjct: 369 LSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYE--SDGVSEIVK 426
Query: 80 L----ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYT 135
L ++P + +I+ C K +++D AV +++ G+ P + Y
Sbjct: 427 LLKDHNKAILPDSDSLSIVIN-CLVKA-------NKVDMAVTLLHDIVQNGLIPGPMMYN 478
Query: 136 LLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA-KCKYIDAHIGIYDEMVE 194
+IE + + GRS + ++ EM++ G++ +T N + A +C ++ A + + +M
Sbjct: 479 NIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGA-LDLLKKMRF 537
Query: 195 KRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVK 251
+P + ++ C R +A K D + G ++ I G G V
Sbjct: 538 YGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEG-VD 596
Query: 252 EAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ ++ NG P Y LI L +A+ L EMVSKG+
Sbjct: 597 RGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 107 GSLDEIDKAVAYKDEMISRGI-EPTIVTYTLLIEALFEVGRSWG--AEDMIKEMQEKGLK 163
G+ +D+A + D + G+ P TY L+EA+ + S E +KEM++ G
Sbjct: 152 GNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFH 211
Query: 164 LDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFD- 222
D +T ++ Y + + +++E++ + ++ +++ C+ + K F+
Sbjct: 212 FDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFEL 270
Query: 223 --KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLR 280
++ I+ ++ +Y +LI G+ + + +AF++ ++M + G++ YD LI GL
Sbjct: 271 IEMLEERDIRLNYKTYCVLIHGF-VKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC 329
Query: 281 INHEVEQAEELLKEMVSKGICTPDDKKYL 309
+ ++E A L E+ GI P D+ L
Sbjct: 330 KHKDLEMALSLYLEIKRSGI--PPDRGIL 356
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 164/372 (44%), Gaps = 69/372 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M ++G +PT +TY L+ G + E++ ELL M + G V + ++N +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELL------DLMLEEGNVDVGPNIRTFNVL 194
Query: 61 MY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV- 116
+ K+ +EEA +++ +M E G+ P T+ Y+T+ KG + + ++K V
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEEC--GVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 117 ----------------------------AYKDEMISRGIEPTIVTYTLLIEALFEV---- 144
+ M +E +V + LI EV
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 145 ---------------------GRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
G ++ M+E +K DV TY+T+M+ ++ Y++
Sbjct: 313 GIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYME 372
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGI--KPDHLSYNLLIA 241
++ EMV+ ++P+ Y+ + G+ R E +K + ++T + +P+ + + +I+
Sbjct: 373 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVIS 432
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
G+ G + +A RV ++M K G+ P T++ L+ G + +AEE+L+ M G+
Sbjct: 433 GWCSNGS-MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV- 490
Query: 302 TPDDKKYLILTD 313
P++ +L+L +
Sbjct: 491 KPENSTFLLLAE 502
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 156/343 (45%), Gaps = 49/343 (14%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+ + G P++ +Y L+ + ++ E++++ DS + + N+++
Sbjct: 71 LAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDS--IFFNAVINAFS-- 126
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G +E+A L +M EL GL P T Y+TLI KG G G + +++ D
Sbjct: 127 --ESGNMEDAVQALLKMKEL--GLNPTTSTYNTLI-----KGYGIAG---KPERSSELLD 174
Query: 121 EMISRG---IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
M+ G + P I T+ +L++A + + A +++K+M+E G++ D TYNT+ + Y
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 178 -KCKYIDAHIGIYDEMVEK-RIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPD 232
K + + A + ++MV K + +PN T ++ G+C R + + +MK ++ +
Sbjct: 235 QKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEAN 294
Query: 233 HLSYNLLIAGY-------------------SYRG-----GYVKEAFRVRDEMLKNGIDPT 268
+ +N LI G+ S+ G K +V M + +
Sbjct: 295 LVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKAD 354
Query: 269 FTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
TY ++ +E+A ++ KEMV G+ PD Y IL
Sbjct: 355 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGV-KPDAHAYSIL 396
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEE 69
+ TY ++ + +E+A ++ KEM +A D+ +AYS + +V KE ++
Sbjct: 355 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA----HAYSILAKGYVRAKEP--KK 408
Query: 70 ASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEP 129
A +LL E L +ES P+ +I+ T+I C+ G +D A+ ++M G+ P
Sbjct: 409 AEELL-ETLIVESR--PNVVIFTTVISGWCSNG--------SMDDAMRVFNKMCKFGVSP 457
Query: 130 TIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
I T+ L+ EV + W AE++++ M+ G+K + T+ L +
Sbjct: 458 NIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 504
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 6/200 (3%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEK-GLKLDVYTYNTLMSGYAK 178
DEM E T+ ++ L+ A + A KE+ EK G+ D+ TYNT++ +
Sbjct: 146 DEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCR 205
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLS 235
+D + I++E+ + +P+L+++NT++ R E +++D MK+ + P+ S
Sbjct: 206 KGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRS 265
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
YN + G + R +A + D M GI P TY+ALI R+++ +E+ + EM
Sbjct: 266 YNSRVRGLT-RNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM 324
Query: 296 VSKGICTPDDKKYLILTDMV 315
KG+ TPD Y +L ++
Sbjct: 325 KEKGL-TPDTVTYCMLIPLL 343
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 115/228 (50%), Gaps = 17/228 (7%)
Query: 82 SGLVPHT-LIYDTLIDECCTKGIGTKGSL-------DEIDKAVAYKDEMISR-GIEPTIV 132
SG+ H ++D + + C + + + +L ++D+A+ E+ + GI P +V
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
TY +I+AL G + +E+++ G + D+ ++NTL+ + + + I+D M
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 193 VEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
K + PN+ +YN+ + G R ++A L D MKT GI PD +YN LI Y
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN- 313
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGL----RINHEVEQAEELLK 293
++E + +EM + G+ P TY LI L ++ VE +EE +K
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 144/306 (47%), Gaps = 34/306 (11%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDS----GLVRYAYSDNSYN--FVM 61
P I TY ++ G C + ++A E L++M+ +D +++ Y+D+ + +
Sbjct: 255 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 314
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
Y+E ++E +P PH + +I C +G ++++ +
Sbjct: 315 YQE--MDEKGIQVP----------PHA--FSLVIGGLCKEG--------KLNEGYTVFEN 352
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
MI +G +P + YT+LI+ + G A ++ M ++G K DV TY+ +++G K
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMM--LGHC-RCSEAQKLFDKMKTSGIKPDHLSYNL 238
++ + + + N + Y++++ LG R EA++LF++M G D YN
Sbjct: 413 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKN-GIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI ++ + V EA + M + G D T TY L+ G+ H E+A +L M+
Sbjct: 473 LIDAFT-KHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMID 531
Query: 298 KGICTP 303
KGI TP
Sbjct: 532 KGI-TP 536
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 143/321 (44%), Gaps = 20/321 (6%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G +PT+ TY L+ G + V+ A+ + + M+ D +V Y Y
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPD--IVTYNTMIKGY--- 267
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G ++A + L +M G + Y T+I C + VA
Sbjct: 268 -CKAGQTQKAMEKLRDMET--RGHEADKITYMTMIQACYADS--------DFGSCVALYQ 316
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM +GI+ ++L+I L + G+ + + M KG K +V Y L+ GYAK
Sbjct: 317 EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSG 376
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
++ I + M+++ +P+++TY+ ++ G C R EA F + G+ + + Y+
Sbjct: 377 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYS 436
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G + G V EA R+ +EM + G Y+ALI + +V++A L K M
Sbjct: 437 SLIDGLG-KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
Query: 298 KGICTPDDKKYLILTDMVHRE 318
+ C Y IL + +E
Sbjct: 496 EEGCDQTVYTYTILLSGMFKE 516
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 47/225 (20%)
Query: 134 YTLLIEALFEVGRSWGAEDMIKE-------MQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
+ + + A + +S+G M++E M+E G++ +YTYN LM+G ++D+
Sbjct: 183 FPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAE 242
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDK---MKTSGIKPDHLSY------- 236
+++ M RI+P+++TYNTM+ G+C+ + QK +K M+T G + D ++Y
Sbjct: 243 RVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC 302
Query: 237 ----------------------------NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
+L+I G + G + E + V + M++ G P
Sbjct: 303 YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC-KEGKLNEGYTVFENMIRKGSKPN 361
Query: 269 FTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
Y LI G + VE A LL M+ +G PD Y ++ +
Sbjct: 362 VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF-KPDVVTYSVVVN 405
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 25/302 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G P + Y L+ G VE A LL M D +V Y+ N
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD--VVTYSVVVNG---- 406
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ K G +EEA D GL +++ Y +LID G+G G +DE ++ +
Sbjct: 407 LCKNGRVEEALDYFHTCRF--DGLAINSMFYSSLID-----GLGKAGRVDEAERLF---E 456
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEK-GLKLDVYTYNTLMSGYAKC 179
EM +G Y LI+A + + A + K M+E+ G VYTY L+SG K
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKE 516
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSY 236
+ + ++D M++K I P + + G C + + A K+ D++ G+ D
Sbjct: 517 HRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACE 576
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
+++ + G +KEA ++ D + + G + +I LR +V +A+ +K M
Sbjct: 577 DMI--NTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALR---KVGKADLAMKLMH 631
Query: 297 SK 298
SK
Sbjct: 632 SK 633
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 81 ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEA 140
E G+ ++ L+ C +G+ ++A+ + EM +GI + Y L++A
Sbjct: 337 EKGVKWSQDVFGGLVKSFCDEGLK--------EEALVIQTEMEKKGIRSNTIVYNTLMDA 388
Query: 141 LFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPN 200
+ E + EM++KGLK TYN LM YA+ D + EM + ++PN
Sbjct: 389 YNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Query: 201 LLTYNTMMLGHCRCSE----AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRV 256
+ +Y ++ + R + A F +MK G+KP SY LI YS G + K A+
Sbjct: 449 VKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEK-AYAS 507
Query: 257 RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+EM K GI P+ TY +++ R + + + E+ K M+ + I
Sbjct: 508 FEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKI 551
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 131/277 (47%), Gaps = 25/277 (9%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P+ TY L+ + + + LL+EM+ D GL + SY ++
Sbjct: 409 GLKPSAATYNILMDAYARRMQPDIVETLLREME------DLGL---EPNVKSYTCLISAY 459
Query: 65 GGLEEASDLLPE-MLELES-GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEM 122
G ++ SD+ + L ++ GL P + Y LI G +KA A +EM
Sbjct: 460 GRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH--------EKAYASFEEM 511
Query: 123 ISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK-Y 181
GI+P++ TYT +++A G + ++ K M + +K TYNTL+ G+AK Y
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLY 571
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNL 238
I+A + E + +QP+++TYN +M + R + K L +M +KPD ++Y+
Sbjct: 572 IEAR-DVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYST 630
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDAL 275
+I + R K AF M+K+G P +Y+ L
Sbjct: 631 MIYAF-VRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 138/303 (45%), Gaps = 28/303 (9%)
Query: 13 YKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASD 72
+ LV C E+A + EM++ S++ + Y ++YN K +EE
Sbjct: 347 FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNT--IVYNTLMDAYN----KSNHIEEVEG 400
Query: 73 LLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIV 132
L EM + GL P Y+ L+D + + D EM G+EP +
Sbjct: 401 LFTEMRD--KGLKPSAATYNILMDAYARRM--------QPDIVETLLREMEDLGLEPNVK 450
Query: 133 TYTLLIEALFEVGRSWGAEDMIKE----MQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGI 188
+YT LI A GR+ DM + M++ GLK ++Y L+ Y+ + +
Sbjct: 451 SYTCLISAY---GRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS 507
Query: 189 YDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMK---TSGIKPDHLSYNLLIAGYSY 245
++EM ++ I+P++ TY +++ R + KL + K IK ++YN L+ G++
Sbjct: 508 FEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAK 567
Query: 246 RGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDD 305
+G Y+ EA V E K G+ P+ TY+ L+ + + +LLKEM + + PD
Sbjct: 568 QGLYI-EARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL-KPDS 625
Query: 306 KKY 308
Y
Sbjct: 626 ITY 628
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 4/201 (1%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
++M +G++ + + L+++ + G A + EM++KG++ + YNTLM Y K
Sbjct: 333 EKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSY 236
+I+ G++ EM +K ++P+ TYN +M + R + + L +M+ G++P+ SY
Sbjct: 393 NHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSY 452
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
LI+ Y A M K G+ P+ +Y ALI ++ E+A +EM
Sbjct: 453 TCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC 512
Query: 297 SKGICTPDDKKYLILTDMVHR 317
+GI P + Y + D R
Sbjct: 513 KEGI-KPSVETYTSVLDAFRR 532
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 6/157 (3%)
Query: 165 DVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLT----YNTMMLGHCRCSEAQKL 220
DV YN +SG + + D +Y+ M + + P+ +T T+ E ++
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 221 FDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLR 280
F+KM G+K + L+ + G +EA ++ EM K GI Y+ L+
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDE-GLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 281 INHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHR 317
++ +E+ E L EM KG+ P Y IL D R
Sbjct: 391 KSNHIEEVEGLFTEMRDKGL-KPSAATYNILMDAYAR 426
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 132/305 (43%), Gaps = 26/305 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K P + + L+ C V +A+E+ + M+ R+ +Y+ +
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD----------RFTPDSKTYSIL 243
Query: 61 MY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ KE L +A ++ EM++ +G P + Y ++D C G +D+A+
Sbjct: 244 LEGWGKEPNLPKAREVFREMID--AGCHPDIVTYSIMVDILCKAG--------RVDEALG 293
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
M +PT Y++L+ R A D EM+ G+K DV +N+L+ +
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMK--TSGIKPDHLS 235
K + + EM K + PN + N ++ E + FD + +PD +
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADT 413
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y ++I + + ++ A +V M K G+ P+ T+ LI GL ++A LL+EM
Sbjct: 414 YTMVIKMFCEKKE-METADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEM 472
Query: 296 VSKGI 300
+ GI
Sbjct: 473 IEMGI 477
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 120/260 (46%), Gaps = 17/260 (6%)
Query: 63 KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEM 122
K + +A ++ M P + Y L++ G G + +L KA EM
Sbjct: 215 KSKNVRKAQEVFENM---RDRFTPDSKTYSILLE-----GWGKEPNLP---KAREVFREM 263
Query: 123 ISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYI 182
I G P IVTY+++++ L + GR A +++ M K + Y+ L+ Y +
Sbjct: 264 IDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRL 323
Query: 183 DAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQ---KLFDKMKTSGIKPDHLSYNLL 239
+ + + EM ++ ++ +N+++ C+ + + ++ +MK+ G+ P+ S N++
Sbjct: 324 EEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNII 383
Query: 240 IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ RG EAF V +M+K +P TY +I E+E A+++ K M KG
Sbjct: 384 LRHLIERGEK-DEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKG 441
Query: 300 ICTPDDKKYLILTDMVHRER 319
+ P + +L + + ER
Sbjct: 442 V-FPSMHTFSVLINGLCEER 460
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
R E ++ Y ++IE+ ++ + D+I M++K + L+V T+ +M YA+ + +D
Sbjct: 128 RHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDE 186
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
I ++ M + + PNL+ +N ++ C+ +AQ++F+ M+ PD +Y++L+
Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLE 245
Query: 242 GYSYRGGYVK--EAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
G+ K E FR EM+ G P TY ++ L V++A +++ M
Sbjct: 246 GWGKEPNLPKAREVFR---EMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM-DPS 301
Query: 300 ICTPDDKKYLILT 312
IC P Y +L
Sbjct: 302 ICKPTTFIYSVLV 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 34/230 (14%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+ G P I TY +V C V++A +++ M D S + YS + +
Sbjct: 263 MIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM----DPSICKPTTFIYSVLVHTY- 317
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCT-----------KGIGTKGSL 109
E LEEA D EM SG+ ++++LI C K + +KG
Sbjct: 318 -GTENRLEEAVDTFLEMER--SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT 374
Query: 110 DEIDKAVAYKDEMISRG---------------IEPTIVTYTLLIEALFEVGRSWGAEDMI 154
+I RG EP TYT++I+ E A+ +
Sbjct: 375 PNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVW 434
Query: 155 KEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTY 204
K M++KG+ ++T++ L++G + + + +EM+E I+P+ +T+
Sbjct: 435 KYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 143/354 (40%), Gaps = 58/354 (16%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P TY L+ G C + A++L EM+ + + DS + N+ K
Sbjct: 228 GISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDS------VAHNALLDGFCKL 281
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G + EA +LL + E + G V Y +LID G+ +A M+
Sbjct: 282 GRMVEAFELL-RLFE-KDGFVLGLRGYSSLID-----GLFRA---RRYTQAFELYANMLK 331
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+ I+P I+ YT+LI+ L + G+ A ++ M KG+ D Y YN ++ ++
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ EM E P+ T+ ++ CR EA+++F +++ SG P ++N LI
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 242 GYSYRG--------------------------------------GYVKEAFRVRDEMLKN 263
G G G + +A+R
Sbjct: 452 GLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADT 511
Query: 264 GIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHR 317
G P +Y+ LI G +++ A +LL + KG+ +PD Y L + +HR
Sbjct: 512 GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL-SPDSVTYNTLINGLHR 564
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 126/285 (44%), Gaps = 52/285 (18%)
Query: 53 SDNSYNFV-----MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKG 107
S N Y F +YK+G +A + +M G+ P+ + Y LI G+ +G
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTG--RGISPNRVTYTILIS-----GLCQRG 247
Query: 108 SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVY 167
S D+ K EM + G P V + L++ ++GR A ++++ ++ G L +
Sbjct: 248 SADDARKLFY---EMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 304
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKM 224
Y++L+ G + + +Y M++K I+P+++ Y ++ G + +A KL M
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 225 KTSGIKPDHLSYNLLIAGYSYRG----------------------------------GYV 250
+ GI PD YN +I RG G V
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424
Query: 251 KEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
+EA + E+ K+G P+ T++ALI GL + E+++A LL +M
Sbjct: 425 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A A +EM+ P + T+ +L++ L++ GR+ A+ M +M +G+ + TY L+S
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKP 231
G + D ++ EM P+ + +N ++ G C R EA +L + G
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
Y+ LI G +R +AF + MLK I P Y LI GL ++E A +L
Sbjct: 302 GLRGYSSLIDGL-FRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKL 360
Query: 292 LKEMVSKGICTPD 304
L M SKGI +PD
Sbjct: 361 LSSMPSKGI-SPD 372
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
+E+ S G+ + +LI A ++G + A + M+E + DV+TYN ++ +
Sbjct: 116 EELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMRE 175
Query: 180 K-YIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLS 235
+ + +Y+EM++ PNL T+ +M G R S+AQK+FD M GI P+ ++
Sbjct: 176 EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVT 235
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y +LI+G RG +A ++ EM +G P ++AL+ G + +A ELL+
Sbjct: 236 YTILISGLCQRGS-ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 296 VSKGICTPDDKKYLILTDMVHRER 319
G + Y L D + R R
Sbjct: 295 EKDGFVL-GLRGYSSLIDGLFRAR 317
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 42/272 (15%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
MLK P I Y L+ G ++E A +LL S M G+ Y N+
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLL------SSMPSKGISPDTYCYNAVIKA 382
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGS--LDEIDKAVAY 118
+ G LEE L EM E ES P + LI C G+ + EI+K+
Sbjct: 383 LCGRGLLEEGRSLQLEMSETES--FPDACTHTILICSMCRNGLVREAEEIFTEIEKS--- 437
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVY---------TY 169
G P++ T+ LI+ L + G A ++ +M E G ++ ++
Sbjct: 438 -------GCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVGRPASLFLRLSHSGNRSF 489
Query: 170 NTLM-SGYAKCKYID-AHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKM 224
+T++ SG Y D AH + P++++YN ++ G CR + A KL + +
Sbjct: 490 DTMVESGSILKAYRDLAHFA------DTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVL 543
Query: 225 KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRV 256
+ G+ PD ++YN LI G +R G +EAF++
Sbjct: 544 QLKGLSPDSVTYNTLINGL-HRVGREEEAFKL 574
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 154 IKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYN----TMML 209
++E++ G+ +D Y + L+S YAK + + + M E +P++ TYN MM
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 210 GHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTF 269
A ++++M P+ ++ +L+ G Y+ G +A ++ D+M GI P
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGL-YKKGRTSDAQKMFDDMTGRGISPNR 233
Query: 270 TTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
TY LI GL + A +L EM + G PD + L D
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSG-NYPDSVAHNALLD 276
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 90/240 (37%), Gaps = 41/240 (17%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P Y A++ C +E+ + L EM D A + M +
Sbjct: 368 GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPD------ACTHTILICSMCRN 421
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG-------------IGTKGSL-- 109
G + EA ++ E+ + SG P ++ LID C G +G SL
Sbjct: 422 GLVREAEEIFTEIEK--SGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479
Query: 110 -------DEIDKAV-------AYKD--EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDM 153
D V AY+D G P IV+Y +LI G GA +
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Query: 154 IKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR 213
+ +Q KGL D TYNTL++G + + ++ + R P + Y ++M CR
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCR 597
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 151/344 (43%), Gaps = 44/344 (12%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKR---ASDMSDSGLVRYAYSD--- 54
ML+ P+ +TY L+ C + +A E+ K+M D+ +V AY
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 55 --------------------NSYNFVMY---KEGGLEEASDLLPEMLELESGLVPHTLIY 91
++N ++Y K G +A DL M E + P + +
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
+++ KG EI+ A + M++ G++P IV+Y L+ A G S A
Sbjct: 192 TSIMHLYSVKG--------EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 243
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
++ ++++ G+ DV +Y L++ Y + + ++ M ++R +PN++TYN ++ +
Sbjct: 244 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 303
Query: 212 CR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
+EA ++F +M+ GIKP+ +S L+A S R V GI+
Sbjct: 304 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS-RSKKKVNVDTVLSAAQSRGINLN 362
Query: 269 FTTYDALILGLRIN-HEVEQAEELLKEMVSKGICTPDDKKYLIL 311
Y++ I G IN E+E+A L + M K + D + IL
Sbjct: 363 TAAYNSAI-GSYINAAELEKAIALYQSMRKKKV-KADSVTFTIL 404
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 127/280 (45%), Gaps = 24/280 (8%)
Query: 50 YAYSDNSYNFVM---YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTK 106
Y ++ YN ++ + +++A L EM + P YD LI+
Sbjct: 7 YCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCK--PDAETYDALIN--------AH 56
Query: 107 GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDV 166
G + A+ D+M+ I P+ TY LI A G A ++ K+M + G+ D+
Sbjct: 57 GRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL 116
Query: 167 YTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC-----RCSEAQKLF 221
T+N ++S Y + + ++ M +++P+ T+N ++ +C + S+A LF
Sbjct: 117 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII--YCLSKLGQSSQALDLF 174
Query: 222 DKM--KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL 279
+ M K + +PD +++ ++ YS +G ++ V + M+ G+ P +Y+AL+
Sbjct: 175 NSMREKRAECRPDVVTFTSIMHLYSVKGE-IENCRAVFEAMVAEGLKPNIVSYNALMGAY 233
Query: 280 RINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
++ A +L ++ GI PD Y L + R R
Sbjct: 234 AVHGMSGTALSVLGDIKQNGI-IPDVVSYTCLLNSYGRSR 272
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 147/356 (41%), Gaps = 66/356 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSY--- 57
M+ G P I +Y AL+ H A +L ++K+ + D +V Y NSY
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD--VVSYTCLLNSYGRS 271
Query: 58 --------------------NFVMYK--------EGGLEEASDLLPEMLELESGLVPHTL 89
N V Y G L EA ++ +M + G+ P+ +
Sbjct: 272 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ--DGIKPNVV 329
Query: 90 IYDTLIDECC---------------------------TKGIGTKGSLDEIDKAVAYKDEM 122
TL+ C IG+ + E++KA+A M
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 123 ISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYI 182
+ ++ VT+T+LI + + A +KEM++ + L Y++++ Y+K +
Sbjct: 390 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 449
Query: 183 DAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLL 239
I+++M +P+++ Y +M+ + + +A +LF +M+ +GI+PD ++ + L
Sbjct: 450 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 509
Query: 240 IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
+ ++ +GG F + D M + I T + + E ++A +L++ M
Sbjct: 510 MRAFN-KGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM 564
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 85/145 (58%), Gaps = 4/145 (2%)
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M+ I PT +TY +I+ + R A+ M+ M KG DV T++TL++GY K K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNL 238
+D + I+ EM + I N +TY T++ G C+ + AQ L ++M + G+ PD+++++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKN 263
++AG + +++AF + +++ K+
Sbjct: 121 MLAGLCSK-KELRKAFAILEDLQKS 144
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 80 LESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIE 139
L + P T+ Y+++ID C + D +D A D M S+G P +VT++ LI
Sbjct: 2 LRWSIFPTTITYNSMIDGFCKQ--------DRVDDAKRMLDSMASKGCSPDVVTFSTLIN 53
Query: 140 ALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQP 199
+ R ++ EM +G+ + TY TL+ G+ + +DA + +EM+ + P
Sbjct: 54 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 113
Query: 200 NLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDH 233
+ +T++ M+ G C E +K F ++ DH
Sbjct: 114 DYITFHCMLAGLCSKKELRKAFAILEDLQKSEDH 147
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 192 MVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGG 248
M+ I P +TYN+M+ G C R +A+++ D M + G PD ++++ LI GY +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYC-KAK 59
Query: 249 YVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
V + EM + GI TY LI G +++ A++LL EM+S G+ PD
Sbjct: 60 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV-APD 114
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ PT TY +++ G C V+ AK +L M AS +V ++ N Y
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM--ASKGCSPDVVTFSTLINGYCKA 58
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G+E + EM G+V +T+ Y TLI C G ++D A +
Sbjct: 59 KRVDNGME----IFCEM--HRRGIVANTVTYTTLIHGFCQVG--------DLDAAQDLLN 104
Query: 121 EMISRGIEPTIVTYTLLIEAL 141
EMIS G+ P +T+ ++ L
Sbjct: 105 EMISCGVAPDYITFHCMLAGL 125
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 151/344 (43%), Gaps = 44/344 (12%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKR---ASDMSDSGLVRYAYSD--- 54
ML+ P+ +TY L+ C + +A E+ K+M D+ +V AY
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 55 --------------------NSYNFVMY---KEGGLEEASDLLPEMLELESGLVPHTLIY 91
++N ++Y K G +A DL M E + P + +
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 92 DTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
+++ KG EI+ A + M++ G++P IV+Y L+ A G S A
Sbjct: 324 TSIMHLYSVKG--------EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 375
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
++ ++++ G+ DV +Y L++ Y + + ++ M ++R +PN++TYN ++ +
Sbjct: 376 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 435
Query: 212 CR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
+EA ++F +M+ GIKP+ +S L+A S R V GI+
Sbjct: 436 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS-RSKKKVNVDTVLSAAQSRGINLN 494
Query: 269 FTTYDALILGLRIN-HEVEQAEELLKEMVSKGICTPDDKKYLIL 311
Y++ I G IN E+E+A L + M K + D + IL
Sbjct: 495 TAAYNSAI-GSYINAAELEKAIALYQSMRKKKV-KADSVTFTIL 536
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 127/280 (45%), Gaps = 24/280 (8%)
Query: 50 YAYSDNSYNFVMY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTK 106
Y ++ YN ++ + +++A L EM + P YD LI+
Sbjct: 139 YCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCK--PDAETYDALIN--------AH 188
Query: 107 GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDV 166
G + A+ D+M+ I P+ TY LI A G A ++ K+M + G+ D+
Sbjct: 189 GRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL 248
Query: 167 YTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC-----RCSEAQKLF 221
T+N ++S Y + + ++ M +++P+ T+N ++ +C + S+A LF
Sbjct: 249 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII--YCLSKLGQSSQALDLF 306
Query: 222 DKM--KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL 279
+ M K + +PD +++ ++ YS + G ++ V + M+ G+ P +Y+AL+
Sbjct: 307 NSMREKRAECRPDVVTFTSIMHLYSVK-GEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 365
Query: 280 RINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
++ A +L ++ GI PD Y L + R R
Sbjct: 366 AVHGMSGTALSVLGDIKQNGI-IPDVVSYTCLLNSYGRSR 404
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 147/356 (41%), Gaps = 66/356 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSY--- 57
M+ G P I +Y AL+ H A +L ++K+ + D +V Y NSY
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD--VVSYTCLLNSYGRS 403
Query: 58 --------------------NFVMYK--------EGGLEEASDLLPEMLELESGLVPHTL 89
N V Y G L EA ++ +M + G+ P+ +
Sbjct: 404 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ--DGIKPNVV 461
Query: 90 IYDTLIDECC---------------------------TKGIGTKGSLDEIDKAVAYKDEM 122
TL+ C IG+ + E++KA+A M
Sbjct: 462 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Query: 123 ISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYI 182
+ ++ VT+T+LI + + A +KEM++ + L Y++++ Y+K +
Sbjct: 522 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 581
Query: 183 DAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLL 239
I+++M +P+++ Y +M+ + + +A +LF +M+ +GI+PD ++ + L
Sbjct: 582 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 641
Query: 240 IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
+ ++ +GG F + D M + I T + + E ++A +L++ M
Sbjct: 642 MRAFN-KGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM 696
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 120/253 (47%), Gaps = 14/253 (5%)
Query: 30 KELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTL 89
+ + + R M + G +S NS +++E +E+ + L+ + EL+ VP
Sbjct: 491 RNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELD--FVPDVD 548
Query: 90 IYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWG 149
Y +++E C K ++ D A A D M G+ PT+ Y+ +I +L + GR
Sbjct: 549 TYLIVVNELCKK--------NDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVE 600
Query: 150 AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMML 209
AE+ +M E G++ D Y +++ YA+ ID + +E+V+ ++P+ TY ++
Sbjct: 601 AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLIS 660
Query: 210 GHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID 266
G + +K DKM G+ P+ + Y LI + +G + K +F + M +N I
Sbjct: 661 GFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDF-KFSFTLFGLMGENDIK 719
Query: 267 PTFTTYDALILGL 279
Y L+ GL
Sbjct: 720 HDHIAYITLLSGL 732
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 14/239 (5%)
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G L EA +L + + +P L Y +L C +G + A A D M
Sbjct: 215 GHLNEAIGMLDTLCGMTRMPLPVNL-YKSLFYCFCKRGCAAE--------AEALFDHMEV 265
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G V YT L++ + A + M E+ +LD +NTL+ G+ K +D
Sbjct: 266 DGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDK 325
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLF-DKMKTSGIKPDHLSYNLLI 240
++ +M++K +Q N+ TY+ M+ +C+ A +LF + + I + Y LI
Sbjct: 326 GRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLI 385
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
G+ Y+ G + +A + ML NGI P TY L+ L HE++ A +L+ ++ G
Sbjct: 386 FGF-YKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 145/330 (43%), Gaps = 40/330 (12%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML+ G P Y ++ + +++A EL++E+ + S + Y+ FV
Sbjct: 608 MLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSS----FTYTVLISGFV 663
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG--------IGTKGSLDEI 112
K G +E+ L +MLE GL P+ ++Y LI KG G G D
Sbjct: 664 --KMGMMEKGCQYLDKMLE--DGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 113 DKAVAY---------------KDEMISRGIEPTIVTYTLLIEALFEVGRSWG-------A 150
+AY K ++I + ++ + + L + S G A
Sbjct: 720 HDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFA 779
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
++I +++ K + ++Y +NT+++GY +D + M ++ I PNL+TY +M
Sbjct: 780 MEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKS 838
Query: 211 HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFT 270
H + + D + + +PD + Y+ L+ G + +A + EM K+GI+P
Sbjct: 839 HIEAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPL-DALALMLEMQKSGINPNKD 897
Query: 271 TYDALILGLRINHEVEQAEELLKEMVSKGI 300
+Y+ L+ L + +A +++K+M + I
Sbjct: 898 SYEKLLQCLCYSRLTMEAVKVVKDMAALDI 927
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 133/325 (40%), Gaps = 34/325 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K G + TY ++ C V+ A L + D+S + + Y++ + F
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRN---VHCYTNLIFGF- 388
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
YK+GG+++A DLL ML+ +G+VP + Y L+ E+ A+
Sbjct: 389 -YKKGGMDKAVDLLMRMLD--NGIVPDHITYFVLLK--------MLPKCHELKYAMVILQ 437
Query: 121 EMISRG--IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
++ G I P ++ IE E ++ E+ K L + +
Sbjct: 438 SILDNGCGINPPVIDDLGNIEV--------KVESLLGEIARKDANLAAVGLAVVTTALCS 489
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEA-----QKLFDKMKTSGIKPDH 233
+ A + ++MV P +YN+++ C E L + ++ PD
Sbjct: 490 QRNYIAALSRIEKMVNLGCTPLPFSYNSVI--KCLFQENIIEDLASLVNIIQELDFVPDV 547
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
+Y L++ + AF + D M + G+ PT Y ++I L V +AEE
Sbjct: 548 DTY-LIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFA 606
Query: 294 EMVSKGICTPDDKKYLILTDMVHRE 318
+M+ GI PD+ Y+I+ + R
Sbjct: 607 KMLESGI-QPDEIAYMIMINTYARN 630
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 131/291 (45%), Gaps = 27/291 (9%)
Query: 26 VEQAKELLKE-MKRASDMSDSGLVRYAYSDNS-------YNFVMYK--EGGLEEASDLLP 75
++ A+E+++ + +S +S++ LV DN Y ++ K E G ++
Sbjct: 59 LDSAREVIRRVIDGSSSISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFY 118
Query: 76 EMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYT 135
+ +G+VP + + D+++ C K L D+A A+ D +I+ G P+ + +
Sbjct: 119 NQRVIGNGIVPDSSVLDSMV-FCLVK-------LRRFDEARAHLDRIIASGYAPSRNSSS 170
Query: 136 LLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEK 195
L+++ L R A ++++E+G L ++ L G +++ IG+ D +
Sbjct: 171 LVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGM 230
Query: 196 RIQP---NLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
P NL Y ++ C+ +EA+ LFD M+ G D + Y L+ Y +
Sbjct: 231 TRMPLPVNL--YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYC-KDNN 287
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ A R+ M++ + ++ LI G +++ + +M+ KG+
Sbjct: 288 MTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGV 338
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 43/290 (14%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY---KE 64
P TY +V +++A+++L EM R ++ +YN ++ K+
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANR---------ITYNVLLKGYCKQ 500
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
++ A DLL EM E ++G+ P + Y+ +ID C +D+ A+A+ +EM +
Sbjct: 501 LQIDRAEDLLREMTE-DAGIEPDVVSYNIIIDGCIL--------IDDSAGALAFFNEMRT 551
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM-QEKGLKLDVYTYNTLMSGYAKCKYID 183
RGI PT ++YT L++A G+ A + EM + +K+D+ +N L+ GY + I+
Sbjct: 552 RGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIE 611
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHC-----------------RCSEAQKLFDKMKT 226
+ M E PN+ TY ++ G RC+ +K +
Sbjct: 612 DAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSS 671
Query: 227 SGIKPDHLSYN--LL--IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTY 272
S P L + LL +A R + K+A + M +NGI P T Y
Sbjct: 672 SDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKY 721
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 18/244 (7%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEG 65
F P Y L+ G + V +L+ M+R D +S Y+ FV G
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDD-RNSHPDEVTYTTVVSAFV--NAG 466
Query: 66 GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMI-S 124
++ A +L EM + G+ + + Y+ L+ C + +ID+A EM
Sbjct: 467 LMDRARQVLAEMARM--GVPANRITYNVLLKGYCKQL--------QIDRAEDLLREMTED 516
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
GIEP +V+Y ++I+ + S GA EM+ +G+ +Y TLM +A
Sbjct: 517 AGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKL 576
Query: 185 HIGIYDEMV-EKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLI 240
++DEM+ + R++ +L+ +N ++ G+CR +AQ++ +MK +G P+ +Y L
Sbjct: 577 ANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLA 636
Query: 241 AGYS 244
G S
Sbjct: 637 NGVS 640
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 11/265 (4%)
Query: 63 KEGGLEEASDLLPEMLEL--ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+EG ++ LLP ++ E L+P D+ I KG G + + + +
Sbjct: 382 EEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMR 441
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
R P VTYT ++ A G A ++ EM G+ + TYN L+ GY K
Sbjct: 442 RQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQL 501
Query: 181 YIDAHIGIYDEMVEKR-IQPNLLTYNTMMLGHC----RCSEAQKLFDKMKTSGIKPDHLS 235
ID + EM E I+P++++YN ++ G C + A F++M+T GI P +S
Sbjct: 502 QIDRAEDLLREMTEDAGIEPDVVSYNIIIDG-CILIDDSAGALAFFNEMRTRGIAPTKIS 560
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNG-IDPTFTTYDALILGLRINHEVEQAEELLKE 294
Y L+ ++ G K A RV DEM+ + + ++ L+ G +E A+ ++
Sbjct: 561 YTTLMKAFAM-SGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSR 619
Query: 295 MVSKGICTPDDKKYLILTDMVHRER 319
M G P+ Y L + V + R
Sbjct: 620 MKENGF-YPNVATYGSLANGVSQAR 643
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVG 145
P + Y T++ G+ +D+A EM G+ +TY +L++ +
Sbjct: 450 PDEVTYTTVVSAFVNAGL--------MDRARQVLAEMARMGVPANRITYNVLLKGYCKQL 501
Query: 146 RSWGAEDMIKEMQE-KGLKLDVYTYNTLMSGYAKCKYIDAHIG---IYDEMVEKRIQPNL 201
+ AED+++EM E G++ DV +YN ++ G C ID G ++EM + I P
Sbjct: 502 QIDRAEDLLREMTEDAGIEPDVVSYNIIIDG---CILIDDSAGALAFFNEMRTRGIAPTK 558
Query: 202 LTYNTMMLGHCRCSE---AQKLFDKM-KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVR 257
++Y T+M + A ++FD+M +K D +++N+L+ GY R G +++A RV
Sbjct: 559 ISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYC-RLGLIEDAQRVV 617
Query: 258 DEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
M +NG P TY +L G+ + A L KE+
Sbjct: 618 SRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEI 655
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 22/251 (8%)
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G EEA + + E GL +T + L+D C + +++A ++ S
Sbjct: 169 GEWEEAVGIFDRLGEF--GLEKNTESMNLLLDTLCKE--------KRVEQARVVLLQLKS 218
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
I P T+ + I + R A I+EM+ G + V +Y T++ Y C+ +
Sbjct: 219 H-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCY--CQQFE- 274
Query: 185 HIGIYD---EMVEKRIQPNLLTYNTMML---GHCRCSEAQKLFDKMKTSGIKPDHLSYNL 238
I +Y+ EM PN +TY T+M EA ++ +MK SG KPD L YN
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 239 LIAGYSYRGGYVKEAFRV-RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI + R G ++EA RV R EM + G+ +TY+++I + E ++A ELLKEM S
Sbjct: 335 LIHTLA-RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES 393
Query: 298 KGICTPDDKKY 308
+C PD Y
Sbjct: 394 SNLCNPDVHTY 404
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 15/280 (5%)
Query: 42 MSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTK 101
+ + GL + S N + KE +E+A +L L+L+S + P+ ++ I C
Sbjct: 181 LGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL---LQLKSHITPNAHTFNIFIHGWCKA 237
Query: 102 GIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG 161
+ +++A+ EM G P +++YT +I + +M+ EM+ G
Sbjct: 238 --------NRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG 289
Query: 162 LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM--LGHC-RCSEAQ 218
+ TY T+MS K + + + M +P+ L YN ++ L R EA+
Sbjct: 290 SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAE 349
Query: 219 KLFD-KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALIL 277
++F +M G+ + +YN +IA Y + K +++ N +P TY L+
Sbjct: 350 RVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLR 409
Query: 278 GLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHR 317
+V + +LLKEMV+K + D+ Y L + R
Sbjct: 410 SCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 138/319 (43%), Gaps = 23/319 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G + + L+ C VEQA+ +L ++K S + A++ N + K
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-------SHITPNAHTFNIFIHGWCKA 237
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
+EEA + EM G P + Y T+I C + E K EM +
Sbjct: 238 NRVEEALWTIQEMKG--HGFRPCVISYTTIIRCYCQQF--------EFIKVYEMLSEMEA 287
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G P +TYT ++ +L A + M+ G K D YN L+ A+ ++
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 185 HIGIYD-EMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGI-KPDHLSYNLL 239
++ EM E + N TYN+M+ +C E K L +M++S + PD +Y L
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPL 407
Query: 240 IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ RG V+ +++ + K+ + +TY LI L + E A L +EM+S+
Sbjct: 408 LRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQD 467
Query: 300 ICTPDDKKYLILTDMVHRE 318
I TP + L+L + V ++
Sbjct: 468 I-TPRHRTCLLLLEEVKKK 485
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 133/312 (42%), Gaps = 31/312 (9%)
Query: 2 LKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMK----RASDMSDSGLVRYAYSDNSY 57
LK P T+ + G C + VE+A ++EMK R +S + ++R Y +
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR-CYCQQ-F 273
Query: 58 NFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
F+ + ++L EM +G P+++ Y T+ + + + E ++A+
Sbjct: 274 EFI--------KVYEMLSEM--EANGSPPNSITYTTI--------MSSLNAQKEFEEALR 315
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIK-EMQEKGLKLDVYTYNTLMSGY 176
M G +P + Y LI L GR AE + + EM E G+ ++ TYN++++ Y
Sbjct: 316 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
Query: 177 AKCKYIDAHIGIYDEMVEKRI-QPNLLTYNTMMLGHCR---CSEAQKLFDKMKTS-GIKP 231
D I + EM + P++ TY ++ + E KL +M T +
Sbjct: 376 CHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSL 435
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
D +Y LI R + A+ + +EM+ I P T L+ ++ + E AE +
Sbjct: 436 DESTYTFLIQRLC-RANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Query: 292 LKEMVSKGICTP 303
M + + P
Sbjct: 495 EHIMKTVKLTAP 506
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 22/251 (8%)
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G EEA + + E GL +T + L+D C + +++A ++ S
Sbjct: 169 GEWEEAVGIFDRLGEF--GLEKNTESMNLLLDTLCKE--------KRVEQARVVLLQLKS 218
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
I P T+ + I + R A I+EM+ G + V +Y T++ Y C+ +
Sbjct: 219 H-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCY--CQQFE- 274
Query: 185 HIGIYD---EMVEKRIQPNLLTYNTMML---GHCRCSEAQKLFDKMKTSGIKPDHLSYNL 238
I +Y+ EM PN +TY T+M EA ++ +MK SG KPD L YN
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 239 LIAGYSYRGGYVKEAFRV-RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI + R G ++EA RV R EM + G+ +TY+++I + E ++A ELLKEM S
Sbjct: 335 LIHTLA-RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES 393
Query: 298 KGICTPDDKKY 308
+C PD Y
Sbjct: 394 SNLCNPDVHTY 404
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 15/280 (5%)
Query: 42 MSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTK 101
+ + GL + S N + KE +E+A +L L+L+S + P+ ++ I C
Sbjct: 181 LGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL---LQLKSHITPNAHTFNIFIHGWCKA 237
Query: 102 GIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG 161
+ +++A+ EM G P +++YT +I + +M+ EM+ G
Sbjct: 238 --------NRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG 289
Query: 162 LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM--LGHC-RCSEAQ 218
+ TY T+MS K + + + M +P+ L YN ++ L R EA+
Sbjct: 290 SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAE 349
Query: 219 KLFD-KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALIL 277
++F +M G+ + +YN +IA Y + K +++ N +P TY L+
Sbjct: 350 RVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLR 409
Query: 278 GLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHR 317
+V + +LLKEMV+K + D+ Y L + R
Sbjct: 410 SCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 138/319 (43%), Gaps = 23/319 (7%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G + + L+ C VEQA+ +L ++K S + A++ N + K
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-------SHITPNAHTFNIFIHGWCKA 237
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
+EEA + EM G P + Y T+I C + E K EM +
Sbjct: 238 NRVEEALWTIQEMKG--HGFRPCVISYTTIIRCYCQQF--------EFIKVYEMLSEMEA 287
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G P +TYT ++ +L A + M+ G K D YN L+ A+ ++
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 185 HIGIYD-EMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGI-KPDHLSYNLL 239
++ EM E + N TYN+M+ +C E K L +M++S + PD +Y L
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPL 407
Query: 240 IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ RG V+ +++ + K+ + +TY LI L + E A L +EM+S+
Sbjct: 408 LRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQD 467
Query: 300 ICTPDDKKYLILTDMVHRE 318
I TP + L+L + V ++
Sbjct: 468 I-TPRHRTCLLLLEEVKKK 485
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 133/312 (42%), Gaps = 31/312 (9%)
Query: 2 LKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMK----RASDMSDSGLVRYAYSDNSY 57
LK P T+ + G C + VE+A ++EMK R +S + ++R Y +
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR-CYCQQ-F 273
Query: 58 NFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
F+ + ++L EM +G P+++ Y T+ + + + E ++A+
Sbjct: 274 EFI--------KVYEMLSEM--EANGSPPNSITYTTI--------MSSLNAQKEFEEALR 315
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIK-EMQEKGLKLDVYTYNTLMSGY 176
M G +P + Y LI L GR AE + + EM E G+ ++ TYN++++ Y
Sbjct: 316 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
Query: 177 AKCKYIDAHIGIYDEMVEKRI-QPNLLTYNTMMLGHCR---CSEAQKLFDKMKTS-GIKP 231
D I + EM + P++ TY ++ + E KL +M T +
Sbjct: 376 CHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSL 435
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
D +Y LI R + A+ + +EM+ I P T L+ ++ + E AE +
Sbjct: 436 DESTYTFLIQRLC-RANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Query: 292 LKEMVSKGICTP 303
M + + P
Sbjct: 495 EHIMKTVKLTAP 506
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 8/203 (3%)
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM 173
K Y +M + G+ + +Y++ ++ + + G+ W A + KEM+ + +KLDV YNT++
Sbjct: 207 KCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVI 266
Query: 174 SGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIK 230
+ ++ I ++ EM E+ +PN+ T+NT++ C R +A ++ D+M G +
Sbjct: 267 RAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQ 326
Query: 231 PDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEE 290
PD ++Y L + R E + M+++G+ P TY L+ ++
Sbjct: 327 PDSITYMCLFS----RLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLY 382
Query: 291 LLKEMVSKGICTPDDKKYLILTD 313
+ K M G TPD Y + D
Sbjct: 383 VWKTMKESGD-TPDSAAYNAVID 404
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 17/229 (7%)
Query: 42 MSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTK 101
M G+ + +S + Y +M K G +A L EM L + Y+T+I +
Sbjct: 215 MDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKL--DVVAYNTVI-----R 267
Query: 102 GIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG 161
IG ++ + EM RG EP + T+ +I+ L E GR A M+ EM ++G
Sbjct: 268 AIGASQG---VEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRG 324
Query: 162 LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK-- 219
+ D TY L S K I + ++ M+ ++P + TY +M R Q
Sbjct: 325 CQPDSITYMCLFSRLEKPSEI---LSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVL 381
Query: 220 -LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
++ MK SG PD +YN +I + G + A +EM++ G+ P
Sbjct: 382 YVWKTMKESGDTPDSAAYNAVIDAL-IQKGMLDMAREYEEEMIERGLSP 429
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 10/188 (5%)
Query: 134 YTLLIEALFEVGRSWG-AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
+ L++ ++G WG ++ K+M +G+ D+++Y+ M K + +Y EM
Sbjct: 192 HNLILRGWSKLG-WWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEM 250
Query: 193 VEKRIQPNLLTYNTMM--LGHCRCSE-AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
+R++ +++ YNT++ +G + E ++F +M+ G +P+ ++N +I G
Sbjct: 251 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLC-EDGR 309
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYL 309
+++A+R+ DEM K G P TY L L E+ L M+ G+ P Y+
Sbjct: 310 MRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILS---LFGRMIRSGV-RPKMDTYV 365
Query: 310 ILTDMVHR 317
+L R
Sbjct: 366 MLMRKFER 373
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 146/303 (48%), Gaps = 28/303 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
+L++G + ++ +L++ + ++E ++++ MK D L + +SY
Sbjct: 115 VLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK------DRNLSSWNSILSSYT-- 166
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G +++A LL EM E+ GL P + +++L+ +KG+ A+A
Sbjct: 167 --KLGYVDDAIGLLDEM-EI-CGLKPDIVTWNSLLSGYASKGLS--------KDAIAVLK 214
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M G++P+ + + L++A+ E G + + + L DVY TL+ Y K
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG 274
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYN 237
Y+ ++D M K N++ +N+++ G C +A+ L +M+ GIKPD +++N
Sbjct: 275 YLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
L +GY+ G ++A V +M + G+ P ++ A+ G N A ++ +M
Sbjct: 331 SLASGYATLGK-PEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE 389
Query: 298 KGI 300
+G+
Sbjct: 390 EGV 392
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 128/309 (41%), Gaps = 58/309 (18%)
Query: 29 AKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHT 88
A +L EM + D++ + +V V + G E+A +L EM + T
Sbjct: 42 ANKLFDEMPKRDDLAWNEIV----------MVNLRSGNWEKAVELFREMQFSGAKAYDST 91
Query: 89 LIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSW 148
++ L+ C K +G +I V + G+E + LI G+
Sbjct: 92 MV--KLLQVCSNKEGFAEGR--QIHGYV------LRLGLESNVSMCNSLIVMYSRNGKLE 141
Query: 149 GAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM 208
+ + M+++ L ++N+++S Y K Y+D IG+ DEM ++P+++T+N+++
Sbjct: 142 LSRKVFNSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLL 197
Query: 209 LGHCR---CSEAQKLFDKMKTSGIKPD---------------HLSYNLLIAGYSYRGG-- 248
G+ +A + +M+ +G+KP HL I GY R
Sbjct: 198 SGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLW 257
Query: 249 ------------YVKEAFRVRDEMLKNGIDP-TFTTYDALILGLRINHEVEQAEELLKEM 295
Y+K + M+ + +D +++L+ GL ++ AE L+ M
Sbjct: 258 YDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRM 317
Query: 296 VSKGICTPD 304
+GI PD
Sbjct: 318 EKEGI-KPD 325
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 130 TIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIY 189
IV + L+ L AE ++ M+++G+K D T+N+L SGYA + + +
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 190 DEMVEKRIQPNLLTYNTMMLGHCRCSE------AQKLFDKMKTSGIKPDHLSYNLLI 240
+M EK + PN++++ + G CS+ A K+F KM+ G+ P+ + + L+
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSG---CSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 125/302 (41%), Gaps = 34/302 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K G P T+ +L G T + E+A +++ +MK + G+ S +
Sbjct: 317 MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK------EKGVAPNVVSWTAIFSG 370
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G A + +M E G+ P+ TL+ G L +
Sbjct: 371 CSKNGNFRNALKVFIKMQE--EGVGPNAATMSTLLK--------ILGCLSLLHSGKEVHG 420
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+ + + T L++ + G A ++ ++ K L ++N ++ GYA
Sbjct: 421 FCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFG 476
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS----EAQKLFDKMKTS-GIKP--DH 233
+ I + M+E ++P+ +T+ T +L C+ S E K FD M++ GI P +H
Sbjct: 477 RGEEGIAAFSVMLEAGMEPDAITF-TSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEH 535
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
S + + G R GY+ EA+ M + P T + A + +I+ ++E AE K
Sbjct: 536 CSCMVDLLG---RSGYLDEAWDFIQTM---SLKPDATIWGAFLSSCKIHRDLELAEIAWK 589
Query: 294 EM 295
+
Sbjct: 590 RL 591
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 26/246 (10%)
Query: 81 ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEA 140
+SG+ + +Y+ +I+ CC + + LDE+ +EMI G P VT+ +L++
Sbjct: 657 KSGIHWNQEMYNCVIN-CCARAL----PLDELSGTF---EEMIRYGFTPNTVTFNVLLDV 708
Query: 141 LFEVGRSWGAEDMIKEMQEKGL------KLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVE 194
+G + K++ E L +DV +YNT+++ Y K K M
Sbjct: 709 -------YGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQF 761
Query: 195 KRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVK 251
+L YNT++ + + + +K + +MK S PDH +YN++I Y +G ++
Sbjct: 762 DGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG-WID 820
Query: 252 EAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
E V E+ ++G+ P +Y+ LI I VE+A L+KEM + I PD Y L
Sbjct: 821 EVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNI-IPDKVTYTNL 879
Query: 312 TDMVHR 317
+ R
Sbjct: 880 VTALRR 885
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 51/272 (18%)
Query: 17 VLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY---KEGGLEEASDL 73
VLG E ++A++L+KE+ G + S +N V+Y K+G ++ AS
Sbjct: 183 VLG--RREEWDRAEDLIKEL--------CGFHEFQKSYQVFNTVIYACTKKGNVKLASKW 232
Query: 74 LPEMLELESGLVP--------------------------HTLIYDTLIDECCTKGIGTKG 107
MLE G+ P H + + + + I
Sbjct: 233 FHMMLEF--GVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYT 290
Query: 108 SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVY 167
L DKA D M + + + +++ A + G+ AE ++ M+ G ++
Sbjct: 291 RLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNII 350
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKM 224
YNTL++GY K ++A G++ + ++P+ +Y +M+ G R EA+ + ++
Sbjct: 351 AYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQEL 410
Query: 225 KTSGIKPDHLSYNL-----LIAGYSYRGGYVK 251
K G KP+ S+NL L A Y R G +K
Sbjct: 411 KRCGYKPN--SFNLFTLINLQAKYGDRDGAIK 440
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 24 HEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSY--NFVMY--------KEGGLEEASDL 73
+E +LK ++ SD + + + NFV Y + + A DL
Sbjct: 137 QSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDL 196
Query: 74 LPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVT 133
+ E+ + +++T+I C KG + A + M+ G+ P + T
Sbjct: 197 IKELCGFHEFQKSYQ-VFNTVIYACTKKG--------NVKLASKWFHMMLEFGVRPNVAT 247
Query: 134 YTLLIEALFEVGRSWG---AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD 190
+L+ L++ ++W AE M++ G+ + Y+++++ Y + + D + D
Sbjct: 248 IGMLM-GLYQ--KNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLRLYDKAEEVID 303
Query: 191 EMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRG 247
M + R++ L + M+ + + + A+ + M+ +G P+ ++YN LI GY G
Sbjct: 304 LMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGY---G 360
Query: 248 GYVK-EAFRVRDEMLKN-GIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
K EA + L N G++P T+Y ++I G E+A+ +E+
Sbjct: 361 KIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQEL 410
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 22/233 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ GF P T+ L+ ++ EL KR G+V SYN +
Sbjct: 690 MIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKR------HGVVDVI----SYNTI 739
Query: 61 MYKEGGLEEASDLLPEMLELE-SGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
+ G ++ +++ + ++ G Y+TL+D G +++K +
Sbjct: 740 IAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLD--------AYGKDKQMEKFRSIL 791
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
M P TY ++I E G D++KE++E GL D+ +YNTL+ Y
Sbjct: 792 KRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIG 851
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGI 229
++ +G+ EM + I P+ +TY ++ R EA K MK GI
Sbjct: 852 GMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 107 GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM----QEKGL 162
GSL+E + DE + IV L + + + +D ++ + ++ G+
Sbjct: 607 GSLEEACSVLEIMDE------QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGI 660
Query: 163 KLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQK 219
+ YN +++ A+ +D G ++EM+ PN +T+N ++ + + + +
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNE 720
Query: 220 LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL 279
LF K G+ D +SYN +IA Y Y + +++ M +G + Y+ L+
Sbjct: 721 LFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKN-MQFDGFSVSLEAYNTLLDAY 778
Query: 280 RINHEVEQAEELLKEMVSKGICTPDDKKYLILTDM 314
+ ++E+ +LK M K PD Y I+ ++
Sbjct: 779 GKDKQMEKFRSILKRM-KKSTSGPDHYTYNIMINI 812
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 15/242 (6%)
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
VM K+G A L EM SG P +Y+ LI T + T+ ++K Y
Sbjct: 142 VMGKKGQTRMAMWLFSEMKN--SGCRPDASVYNALI----TAHLHTRDKAKALEKVRGYL 195
Query: 120 DEMISRGIE---PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
D+M +GIE P +VTY +L+ A + G+ + K++ + DVYT+N +M Y
Sbjct: 196 DKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAY 253
Query: 177 AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKL---FDKMKTSGIKPDH 233
K I + M +P+++T+N ++ + + E +K+ F + S KP
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTL 313
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
++N +I Y + + +A V +M P+F TY+ +I+ V +A E+ +
Sbjct: 314 PTFNSMIINYG-KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFE 372
Query: 294 EM 295
E+
Sbjct: 373 EV 374
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 9/176 (5%)
Query: 129 PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA----KCKYIDA 184
P Y+ LI + + G++ A + EM+ G + D YN L++ + K K ++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 185 HIGIYDEMVE-KRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
G D+M +R QPN++TYN ++ + + LF + S + PD ++N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
Y + G +KE V M N P T++ LI E E+ E+ K ++
Sbjct: 251 DAYG-KNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 28/268 (10%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM---YKE 64
P + TY L+ +V+Q L K++ DMS Y ++N VM K
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDL----DMSPVSPDVY-----TFNGVMDAYGKN 256
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G ++E +L M E P + ++ LID G K +++++ +K M S
Sbjct: 257 GMIKEMEAVLTRMRSNECK--PDIITFNVLID-----SYGKKQEFEKMEQT--FKSLMRS 307
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+ +PT+ T+ +I + AE + K+M + TY ++ Y C +
Sbjct: 308 KE-KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSR 366
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIA 241
I++E+ E T N M+ +CR EA KLF + PD +Y L
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
Query: 242 GYSYRGGYVKEAFRV-RDEMLKNGIDPT 268
Y+ +KE ++ +M K+GI P
Sbjct: 427 AYT--KADMKEQVQILMKKMEKDGIVPN 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 15/242 (6%)
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
VM K+G A L EM SG P +Y+ LI T + T+ ++K Y
Sbjct: 142 VMGKKGQTRMAMWLFSEMKN--SGCRPDASVYNALI----TAHLHTRDKAKALEKVRGYL 195
Query: 120 DEMISRGIE---PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
D+M +GIE P +VTY +L+ A + G+ + K++ + DVYT+N +M Y
Sbjct: 196 DKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAY 253
Query: 177 AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKL---FDKMKTSGIKPDH 233
K I + M +P+++T+N ++ + + E +K+ F + S KP
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTL 313
Query: 234 LSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
++N +I Y + + +A V +M P+F TY+ +I+ V +A E+ +
Sbjct: 314 PTFNSMIINYG-KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFE 372
Query: 294 EM 295
E+
Sbjct: 373 EV 374
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 9/176 (5%)
Query: 129 PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA----KCKYIDA 184
P Y+ LI + + G++ A + EM+ G + D YN L++ + K K ++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 185 HIGIYDEMVE-KRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
G D+M +R QPN++TYN ++ + + LF + S + PD ++N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
Y + G +KE V M N P T++ LI E E+ E+ K ++
Sbjct: 251 DAYG-KNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 28/268 (10%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM---YKE 64
P + TY L+ +V+Q L K++ DMS Y ++N VM K
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDL----DMSPVSPDVY-----TFNGVMDAYGKN 256
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G ++E +L M E P + ++ LID G K +++++ +K M S
Sbjct: 257 GMIKEMEAVLTRMRSNECK--PDIITFNVLID-----SYGKKQEFEKMEQT--FKSLMRS 307
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
+ +PT+ T+ +I + AE + K+M + TY ++ Y C +
Sbjct: 308 KE-KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSR 366
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIA 241
I++E+ E T N M+ +CR EA KLF + PD +Y L
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
Query: 242 GYSYRGGYVKEAFRV-RDEMLKNGIDPT 268
Y+ +KE ++ +M K+GI P
Sbjct: 427 AYT--KADMKEQVQILMKKMEKDGIVPN 452
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 34/281 (12%)
Query: 26 VEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLV 85
V++AK+++ ++K + +S +V + Y+EG E + EM E E G
Sbjct: 231 VDEAKKMIGKIKPNATTFNSMMVSF-----------YREGETEMVERIWREMEE-EVGCS 278
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEAL---F 142
P+ Y+ L++ C +G+ + +A +EM RG+ IV Y +I L F
Sbjct: 279 PNVYSYNVLMEAYCARGL--------MSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNF 330
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
EV + A+++ ++M KG++ TY L++GY K +D+ + +Y EM K + + L
Sbjct: 331 EVVK---AKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGL 387
Query: 203 TYNTMMLGHCRCSEAQKLF-------DKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFR 255
T ++ G C + Q++ D ++ + P Y LL+ G + A
Sbjct: 388 TIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLC-EDGKMDRALN 446
Query: 256 VRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
++ EM+ G P+ TY A I G I + E + L EM
Sbjct: 447 IQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMA 487
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 94/180 (52%), Gaps = 14/180 (7%)
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
++ +EM ++GL + TY TL+ G + D I+ EMV + P+++TYN ++ G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 212 CRCSEAQK------------LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
C+ + +K LF + G+KP+ ++Y +I+G+ + G+ +EA+ + +
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKK-GFKEEAYTLFRK 120
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
M ++G P TY+ LI + + + EL+KEM S D Y ++TDM+H R
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF-AGDASTYGLVTDMLHDGR 179
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM RG+ VTYT LI+ LF+ G A+++ KEM G+ D+ TYN L+ G K
Sbjct: 6 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNG 65
Query: 181 YIDAHI---------GIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSG 228
++ + ++ + K ++PN++TY TM+ G C+ EA LF KMK G
Sbjct: 66 KLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDG 125
Query: 229 IKPDHLSYNLLIAGY 243
PD +YN LI +
Sbjct: 126 PLPDSGTYNTLIRAH 140
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Query: 36 MKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLI 95
M+ +MS GLV + + +++ G + A ++ EM+ G+ P + Y+ L+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS--DGVPPDIMTYNILL 58
Query: 96 DECCTKGIGTKGSLDEIDKA-VAYKDE--------MISRGIEPTIVTYTLLIEALFEVGR 146
D C G +++KA VA K E + +G++P +VTYT +I + G
Sbjct: 59 DGLCKNG--------KLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGF 110
Query: 147 SWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYN 205
A + ++M+E G D TYNTL+ + + A + EM R + TY
Sbjct: 111 KEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 169
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 132/287 (45%), Gaps = 39/287 (13%)
Query: 57 YNFVMYKEGGLEEASDLLPEMLE--LESGLVPHTLIYDTLIDECCTKGIGTKG------- 107
YN VM K G+ ++ + E+ E + G+ P Y+TL+ + + KG
Sbjct: 508 YN-VMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKM 566
Query: 108 --------------------SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRS 147
L +++ A EM+ IEP +V Y +LI A + G
Sbjct: 567 RETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNV 626
Query: 148 WGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVE---KRIQPNLLTY 204
A ++ M+E G+ + YN+L+ Y K Y+D IY ++++ K P++ T
Sbjct: 627 QQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTS 686
Query: 205 NTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML 261
N M+ + S +A+ +FD MK G + + ++ +++ Y + G +EA ++ +M
Sbjct: 687 NCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYK-KNGRFEEATQIAKQMR 744
Query: 262 KNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
+ I +Y++++ ++ ++A E KEMVS GI PDD +
Sbjct: 745 EMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGI-QPDDSTF 790
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 145/334 (43%), Gaps = 36/334 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K+G P T ++ E ++A+E K+ + +DS + +Y+ N+
Sbjct: 248 MSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDT 307
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G ++EAS+ M LE G+VP T+ ++T+I G G L E+ +
Sbjct: 308 YGKSGQIKEASETFKRM--LEEGIVPTTVTFNTMIHI-----YGNNGQLGEVTSLM---- 356
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+ + P TY +LI + A KEM++ GLK D +Y TL+ ++
Sbjct: 357 KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRH 416
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
++ G+ EM + ++ + T + + + +K + S K H++ N+
Sbjct: 417 MVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSW-----SWFKRFHVAGNMSS 471
Query: 241 AGYSYR------GGYVKEAFRVR---DEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
GYS GY+ EA RV E+ K T Y+ +I I+ E+A EL
Sbjct: 472 EGYSANIDAYGERGYLSEAERVFICCQEVNKR----TVIEYNVMIKAYGISKSCEKACEL 527
Query: 292 LKEMVSKGICTPDDKKY------LILTDMVHRER 319
+ M+S G+ TPD Y L DM H+ R
Sbjct: 528 FESMMSYGV-TPDKCTYNTLVQILASADMPHKGR 560
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 17/224 (7%)
Query: 80 LESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIE 139
+ G+ P Y TLID + +KG L A+ + +M G++P VT ++++
Sbjct: 214 IRKGIKPINSTYGTLID------VYSKGGLKV--HALCWLGKMSKIGMQPDEVTTGIVLQ 265
Query: 140 ALFEVGRSWGAEDMIKEMQ------EKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMV 193
+ AE+ K+ + + L YTYNT++ Y K I + M+
Sbjct: 266 MYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRML 325
Query: 194 EKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGI--KPDHLSYNLLIAGYSYRGGYVK 251
E+ I P +T+NTM+ + + ++ MKT + PD +YN+LI+ ++ + ++
Sbjct: 326 EEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHT-KNNDIE 384
Query: 252 EAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
A EM +G+ P +Y L+ I H VE+AE L+ EM
Sbjct: 385 RAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM 428
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 113 DKAVAYKDEMISRGI-EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
++AV + S+G E ++ Y +++ L + + + + EM KG+K TY T
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSG 228
L+ Y+K + +M + +QP+ +T ++ + + E QK F K
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 229 IKPD-HL-----SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRIN 282
K D H+ +YN +I Y + G +KEA ML+ GI PT T++ +I N
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYG-KSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNN 346
Query: 283 HEVEQAEELLKEMVSKGICTPDDKKYLILTDM 314
++ + L+K M K C PD + Y IL +
Sbjct: 347 GQLGEVTSLMKTM--KLHCAPDTRTYNILISL 376
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 30/287 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRAS---DMSDSGLVRYAYSDNSY 57
M + G+ Y A++ ++ A+E+ KEM + D+ G++ A++D
Sbjct: 566 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT-- 623
Query: 58 NFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
G +++A + M E +G+ +++IY++LI K G LDE +
Sbjct: 624 -------GNVQQAMSYVEAMKE--AGIPGNSVIYNSLI-----KLYTKVGYLDEAEAIYR 669
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
+ ++ P + T +I E AE + M+++G + + +T+ ++ Y
Sbjct: 670 KLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYK 728
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG----HCRCSEAQKLFDKMKTSGIKPDH 233
K + I +M E +I + L+YN++ LG R EA + F +M +SGI+PD
Sbjct: 729 KNGRFEEATQIAKQMREMKILTDPLSYNSV-LGLFALDGRFKEAVETFKEMVSSGIQPDD 787
Query: 234 LSYNLLIAGYSYRGGYVKEAFR----VRDEMLKNGIDPTFTTYDALI 276
++ L + G K+A R +R + +K G++ +T +L+
Sbjct: 788 STFKSL-GTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLV 833
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 55/300 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + PT+ TY L+ G C V+ A E+L+EMK
Sbjct: 276 MKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMK----------------------- 312
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
M E+E ++++ +ID G+G G L E A+ +
Sbjct: 313 ----------------MAEMEINF----MVFNPIID-----GLGEAGRLSE---ALGMME 344
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
PTIVTY L++ + G GA ++K M +G+ TYN ++K
Sbjct: 345 RFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHN 404
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ + +Y +++E P+ LTY+ ++ C + S A ++ +MK GI PD L+
Sbjct: 405 KTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTT 464
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
+LI R ++EAF D ++ GI P + T+ + GLR + A+ L M S
Sbjct: 465 MLIHLLC-RLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSS 523
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 63 KEGGLEEASDLLPEML-ELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
KEG + EAS L + ++S VP I++ L++ G L + +K +E
Sbjct: 224 KEGHVREASMYLERIGGTMDSNWVPSVRIFNILLN-----GWFRSRKLKQAEK---LWEE 275
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M + ++PT+VTY LIE + R A ++++EM+ ++++ +N ++ G +
Sbjct: 276 MKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGR 335
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNL 238
+ +G+ + P ++TYN+++ C+ + A K+ M T G+ P +YN
Sbjct: 336 LSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNH 395
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
+S + +E + ++++ G P TY ++ L + ++ A ++ KEM ++
Sbjct: 396 FFKYFS-KHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 299 GICTPDDKKYLILTDMVH 316
GI D L T ++H
Sbjct: 455 GI----DPDLLTTTMLIH 468
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 20/239 (8%)
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
LE A LL + + L G++P + Y+TLI + T+ IG ID+A A M G
Sbjct: 29 LERAETLLIDGIRL--GVLPDVITYNTLI-KGYTRFIG-------IDEAYAVTRRMREAG 78
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC-KYIDAH 185
IEP + TY LI + + EM GL D+++YNTLMS Y K ++ +A
Sbjct: 79 IEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAF 138
Query: 186 IGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAG 242
+++++ + P + TYN ++ C+ A +LF +K S +KP+ ++YN+LI G
Sbjct: 139 KILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK-SRVKPELMTYNILING 197
Query: 243 Y--SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
S R G V R E+ K+G P TY ++ +E+ +L +M +G
Sbjct: 198 LCKSRRVGSVDWMMR---ELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 138/314 (43%), Gaps = 51/314 (16%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G +P +TTY +L+ G + + + +L EM SGL +S N+
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLH------SGLSPDMWSYNTLMSC 127
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+K G EA +L E + L +GLVP Y+ L+D C G D A+
Sbjct: 128 YFKLGRHGEAFKILHEDIHL-AGLVPGIDTYNILLDALCKSG--------HTDNAIELFK 178
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+ SR ++P ++TY +LI L + R + M++E+++ G + TY T++ Y K K
Sbjct: 179 HLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTK 237
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
I EK +Q LF KMK G D + N +
Sbjct: 238 RI-----------EKGLQ---------------------LFLKMKKEGYTFDGFA-NCAV 264
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPT-FTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ G +EA+ E++++G +Y+ L+ + ++ ++LL+E+ KG
Sbjct: 265 VSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKG 324
Query: 300 ICTPDDKKYLILTD 313
+ PDD + I+ +
Sbjct: 325 L-KPDDYTHTIIVN 337
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 11/203 (5%)
Query: 123 ISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYI 182
I G+ P ++TY LI+ A + + M+E G++ DV TYN+L+SG AK +
Sbjct: 40 IRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLML 99
Query: 183 DAHIGIYDEMVEKRIQPNLLTYNTMM-----LGHCRCSEAQK-LFDKMKTSGIKPDHLSY 236
+ + ++DEM+ + P++ +YNT+M LG R EA K L + + +G+ P +Y
Sbjct: 100 NRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG--RHGEAFKILHEDIHLAGLVPGIDTY 157
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
N+L+ + G+ A + LK+ + P TY+ LI GL + V + +++E+
Sbjct: 158 NILLDALC-KSGHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELK 215
Query: 297 SKGICTPDDKKYLILTDMVHRER 319
G TP+ Y + M + +
Sbjct: 216 KSGY-TPNAVTYTTMLKMYFKTK 237
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 112/244 (45%), Gaps = 24/244 (9%)
Query: 3 KVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY 62
K G+ P TY ++ +E+ +L +MK+ D +++ + +
Sbjct: 216 KSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFD------GFANCAVVSALI 269
Query: 63 KEGGLEEASDLLPEMLELESGLVPHTLI-YDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
K G EEA + + E++ SG ++ Y+TL++ G+LD +D + +E
Sbjct: 270 KTGRAEEAYECMHELVR--SGTRSQDIVSYNTLLNL-----YFKDGNLDAVDDLL---EE 319
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
+ +G++P T+T+++ L +G + GAE + + E G++ V T N L+ G K +
Sbjct: 320 IEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGH 379
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNL 238
+D + ++ M E R + TY +++ C R A KL G+K +
Sbjct: 380 VDRAMRLFASM-EVRDE---FTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRA 435
Query: 239 LIAG 242
+++G
Sbjct: 436 VLSG 439
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM +GI+P ++ L+I + +S ++ M+++G+ + V TYN + K K
Sbjct: 212 EMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRK 271
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
+ D M+ ++PN +TY+ ++ G C EA+KLF M G KPD Y
Sbjct: 272 KSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYF 331
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI Y +GG + A + E ++ P+F+ +L+ GL + +VE+A+EL+ ++
Sbjct: 332 TLIY-YLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Query: 298 K 298
K
Sbjct: 391 K 391
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 161 GLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEA 217
G++ D+ TYN ++ + + + I EM K I+PN ++ M+ G + E
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 218 QKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALIL 277
K+ MK G+ +YN+ I R KEA + D ML G+ P TY LI
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKS-KEAKALLDGMLSAGMKPNTVTYSHLIH 300
Query: 278 GLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
G + E+A++L K MV++G C PD + Y L
Sbjct: 301 GFCNEDDFEEAKKLFKIMVNRG-CKPDSECYFTL 333
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
E +G +P VT ++L+ AL G+ AE + + EK ++LD YNTL+ +
Sbjct: 729 ESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAG 788
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYN 237
+ IY+ M + ++ TYNTM+ + R +A ++F + SG+ D Y
Sbjct: 789 KLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYT 848
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI---LGLRINHEVEQAEELLKE 294
+I Y +GG + EA + EM K GI P +Y+ ++ R++HEV +ELL+
Sbjct: 849 NMIMHYG-KGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEV---DELLQA 904
Query: 295 MVSKGICTPDDKKYLIL 311
M G CT D YL L
Sbjct: 905 MERNGRCT-DLSTYLTL 920
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 129 PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGI 188
P++V YT+++ +VG+ AE+ EM E G + D T++ YA+ A +
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 189 YDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFD---KMKTSGIKPDHLSYNLLIAGYSY 245
Y + E+RI + YN M+ + S K+ D +M G+ P+ +Y L+++ Y+
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA- 304
Query: 246 RGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
+ G+ +EA + EM G P TY ++I + E+A L ++M S+GI +
Sbjct: 305 KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSN 363
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
V+ ++ G + D M +L+ P ++Y ++ G + +I A
Sbjct: 161 VLKEQRGWRQVRDFFSWM-KLQLSYRPSVVVYTIVLR--------LYGQVGKIKMAEETF 211
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
EM+ G EP V ++ GR K +QE+ + L YN ++S K
Sbjct: 212 LEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKK 271
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSY 236
+ I ++ EMVE+ + PN TY ++ + + EA K F +MK+ G P+ ++Y
Sbjct: 272 SFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTY 331
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
+ +I+ S + G ++A + ++M GI P+
Sbjct: 332 SSVIS-LSVKAGDWEKAIGLYEDMRSQGIVPS 362
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 150/348 (43%), Gaps = 49/348 (14%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
MLK G T+ ++ C TH + +A+ LLK+M+ D+ +YN +
Sbjct: 331 MLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDT---------KTYNIL 381
Query: 61 M---YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGI--GTKGSLDEIDKA 115
+ G +E A + ++ ++ GL P T+ + ++ C + + + + E+D+
Sbjct: 382 LSLHADAGDIEAALEYYRKIRKV--GLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRN 439
Query: 116 VAYKDEMISRGIEPTIVTYTLLIE--ALFE------VGRSWGAEDMIKEMQEKGL----- 162
DE I V L+++ ALFE V S +I EKGL
Sbjct: 440 SIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAE 499
Query: 163 ------------KLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNT---M 207
+ DV YN ++ Y K K + + ++ M + P+ TYN+ M
Sbjct: 500 TVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQM 559
Query: 208 MLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
+ G EAQ++ +M SG KP +Y +IA Y R G + +A + + M K G+ P
Sbjct: 560 LAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASY-VRLGLLSDAVDLYEAMEKTGVKP 618
Query: 268 TFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMV 315
Y +LI G + VE+A + + M G+ +++LT ++
Sbjct: 619 NEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV----QSNHIVLTSLI 662
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 108/241 (44%), Gaps = 37/241 (15%)
Query: 93 TLIDECCTKGIGTK-GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAE 151
T DEC + +D +D+A EM+ G +P TY +I + +G A
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAV 605
Query: 152 DMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH 211
D+ + M++ G+K + Y +L++G+A+ ++ I + M E +Q N + +++ +
Sbjct: 606 DLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAY 665
Query: 212 CRCS---EAQKLFDKMKTSGIKPDHLSYNLLIA--------------------------- 241
+ EA++++DKMK S PD + N +++
Sbjct: 666 SKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVI 725
Query: 242 -----GYSYRG-GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y Y+G G + EA V +EM ++G+ T+++ ++ + ++ + EL EM
Sbjct: 726 SFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
Query: 296 V 296
+
Sbjct: 786 L 786
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 88 TLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRS 147
T ++TLID G ++ A EM+ G+ VT+ +I G
Sbjct: 305 TSTFNTLID--------LYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHL 356
Query: 148 WGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTM 207
AE ++K+M+EKG+ D TYN L+S +A I+A + Y ++ + + P+ +T+ +
Sbjct: 357 SEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAV 416
Query: 208 MLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVK 251
+ C+ +E + + +M + I+ D S +++ Y G V+
Sbjct: 417 LHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQ 463
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 24/311 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K G + TY ++ + +A E + M + M D V Y+ + Y+
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDE--VTYSAILDVYS-- 267
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G +EE L + +G P + + L K G G D I +
Sbjct: 268 --KSGKVEEVLSLYERAVA--TGWKPDAIAFSVL-----GKMFGEAGDYDGIRYVL---Q 315
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM S ++P +V Y L+EA+ G+ A + EM E GL + T L+ Y K +
Sbjct: 316 EMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKAR 375
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC----SEAQKLFDKMKTS-GIKPDHLS 235
+ + +++EM K+ + + YNT +L C EA++LF+ MK S +PD+ S
Sbjct: 376 WARDALQLWEEMKAKKWPMDFILYNT-LLNMCADIGLEEEAERLFNDMKESVQCRPDNFS 434
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y ++ Y GG ++A + +EMLK G+ L+ L ++ +
Sbjct: 435 YTAMLNIYG-SGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLS 493
Query: 296 VSKGICTPDDK 306
+ +G+ PDD+
Sbjct: 494 IKRGV-KPDDR 503
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 113 DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTL 172
+KA+ + + M G+ P VTY+ +++ + G+ + + G K D ++ L
Sbjct: 238 NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVL 297
Query: 173 MSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGI 229
+ + D + EM ++PN++ YNT++ R + A+ LF++M +G+
Sbjct: 298 GKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGL 357
Query: 230 KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI-----LGLRINHE 284
P+ + L+ Y + + ++A ++ +EM F Y+ L+ +GL
Sbjct: 358 TPNEKTLTALVKIYG-KARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLE---- 412
Query: 285 VEQAEELLKEMVSKGICTPDDKKYLILTDM 314
E+AE L +M C PD+ Y + ++
Sbjct: 413 -EEAERLFNDMKESVQCRPDNFSYTAMLNI 441
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 144/312 (46%), Gaps = 28/312 (8%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDM---SDSG---LVRYAYSDNSYNF 59
+P++ Y ++++ HE+ A +L ++ ASD D+G +V Y + N
Sbjct: 160 LNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNE 217
Query: 60 VMYKEGGLEEASDLLPE---MLELESGLVPHTLIYDTLIDECCTKGIGTKGSLD---EID 113
++ GL A D+ E + E G+ +DT C G G G LD +
Sbjct: 218 LLV---GLRRA-DMRSEFKRVFEKLKGM--KRFKFDTWSYNICIHGFGCWGDLDAALSLF 271
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM 173
K + + + P I TY LI L G++ A + E++ G + D TY L+
Sbjct: 272 KEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILI 331
Query: 174 SGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIK 230
G K +D + IY EM P+ + YN ++ G + +EA +LF+KM G++
Sbjct: 332 QGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVR 391
Query: 231 PDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHE--VEQA 288
+YN+LI G +R G + F + ++ K G T+ I+GL++ E +E A
Sbjct: 392 ASCWTYNILIDGL-FRNGRAEAGFTLFCDLKKKGQFVDAITFS--IVGLQLCREGKLEGA 448
Query: 289 EELLKEMVSKGI 300
+L++EM ++G
Sbjct: 449 VKLVEEMETRGF 460
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 30/294 (10%)
Query: 30 KELLKEMKRASDMSD--------SGLVRYAYSDNSYNFVMYK---EGGLEEASDLLPEML 78
ELL ++RA S+ G+ R+ + SYN ++ G L+ A L EM
Sbjct: 216 NELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMK 275
Query: 79 ELES----GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTY 134
E S P Y++LI C G + A+ DE+ G EP TY
Sbjct: 276 ERSSVYGSSFGPDICTYNSLIHVLCLFG--------KAKDALIVWDELKVSGHEPDNSTY 327
Query: 135 TLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVE 194
+LI+ + R A + EMQ G D YN L+ G K + + ++++MV+
Sbjct: 328 RILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQ 387
Query: 195 KRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSY-RGGYV 250
+ ++ + TYN ++ G R A+ LF +K G D ++++ I G R G +
Sbjct: 388 EGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFS--IVGLQLCREGKL 445
Query: 251 KEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
+ A ++ +EM G T +L++G + E+L+K + +G P+
Sbjct: 446 EGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKH-IREGNLVPN 498
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 130 TIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIY 189
T TY ++ + + G A ++ +M E D+ TYN ++ G K D +
Sbjct: 629 TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVL 688
Query: 190 DEMVEKRIQPNLLTYNTMM--LGHC-RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYR 246
D + ++ +++ YNT++ LG R EA +LFD MK++GI PD +SYN +I S +
Sbjct: 689 DRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNS-K 747
Query: 247 GGYVKEAFRVRDEMLKNGIDPTFTT 271
G +KEA++ ML G P T
Sbjct: 748 AGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 141 LFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPN 200
LFE+ G D L YTYN++MS + K Y G+ D+M E +
Sbjct: 616 LFEIFNGMGVTD-----------LTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAAD 664
Query: 201 LLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVR 257
+ TYN ++ G R A + D++ G D + YN LI + + EA ++
Sbjct: 665 IATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALG-KATRLDEATQLF 723
Query: 258 DEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
D M NGI+P +Y+ +I ++++A + LK M+ G C P+
Sbjct: 724 DHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG-CLPN 769
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
D+M I TY ++I+ L ++GR+ A ++ + ++G LD+ YNTL++ K
Sbjct: 654 DQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKA 713
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSY 236
+D ++D M I P++++YNTM+ + + EA K M +G P+H++
Sbjct: 714 TRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTD 773
Query: 237 NLL-IAGYSYRGGYVKEAFRVRDEMLKNGI 265
+L G K+A VR++ N I
Sbjct: 774 TILDYLGKEMEKARFKKASFVRNKPNNNNI 803
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 110/237 (46%), Gaps = 23/237 (9%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEG 65
F P I TY +L+ C + + A + E+K + D+ R ++ M
Sbjct: 285 FGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRM---- 340
Query: 66 GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLD--EIDKAVAYKDEMI 123
++A + EM +G VP T++Y+ L+D G+L ++ +A ++M+
Sbjct: 341 --DDAMRIYGEM--QYNGFVPDTIVYNCLLD----------GTLKARKVTEACQLFEKMV 386
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
G+ + TY +LI+ LF GR+ + ++++KG +D T++ + + ++
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYN 237
+ + +EM + +L+T +++++G R +KL ++ + P+ L +N
Sbjct: 447 GAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWN 503
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
G P +Y+ ++D G D A+A ++ G+ T+ +L++ L
Sbjct: 223 GFKPRVFLYNRIMDALVKNGY--------FDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
+ GR ++++ M+E K DV+ Y ++ +DA + ++DEM I+P+++
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 203 TYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
Y T+++G C R +LF +MK I D Y +LI G+ G V+ A + ++
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGF-VADGKVRSACNLWED 393
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLK 293
++ +G Y+A+I GL ++V++A +L +
Sbjct: 394 LVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQ 427
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 5/195 (2%)
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M S+G P+ + +LI + R + ++M++ G K V+ YN +M K Y
Sbjct: 184 MDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGY 243
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNL 238
D + +Y++ E + T+ ++ G C R E ++ +M+ + KPD +Y
Sbjct: 244 FDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTA 303
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
+I G + + RV DEM ++ I P Y L++GL + VE+ EL EM K
Sbjct: 304 MIKTLVSEGN-LDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGK 362
Query: 299 GICTPDDKKYLILTD 313
I D + Y +L +
Sbjct: 363 QILI-DREIYRVLIE 376
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 133/306 (43%), Gaps = 21/306 (6%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P + Y LV+G C VE+ EL EMK + D + R FV +G +
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIE----GFV--ADGKV 384
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
A +L ++ ++SG + IY+ +I C S++++DKA I +
Sbjct: 385 RSACNLWEDL--VDSGYIADIGIYNAVIKGLC--------SVNQVDKAYKLFQVAIEEEL 434
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
EP T + ++ A + R ++++ + E G + Y A + +
Sbjct: 435 EPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALD 494
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYS 244
++ +++ + ++ YN +M + + QK LF +M+ G +PD SY++ I +
Sbjct: 495 VF-YILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFV 553
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
+G VK A +++++ P+ Y +L GL E++ L++E + P
Sbjct: 554 EKGD-VKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPM 612
Query: 305 DKKYLI 310
+ KY +
Sbjct: 613 EFKYAL 618
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 138/339 (40%), Gaps = 55/339 (16%)
Query: 11 TTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEA 70
TT+ LV G C +E+ E+L+ M+ D +AY+ V EG L+ +
Sbjct: 264 TTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDV----FAYTAMIKTLV--SEGNLDAS 317
Query: 71 SDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPT 130
+ EM E + P + Y TL+ C G +G E+ + K +I R I
Sbjct: 318 LRVWDEMRRDE--IKPDVMAYGTLVVGLCKDGRVERGY--ELFMEMKGKQILIDREI--- 370
Query: 131 IVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD 190
Y +LIE G+ A ++ +++ + G D+ YN ++ G +D ++
Sbjct: 371 ---YRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQ 427
Query: 191 EMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIK-PDHLS----------- 235
+E+ ++P+ T + +M+ + R S+ + +++ G D+L+
Sbjct: 428 VAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEE 487
Query: 236 ----------------------YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYD 273
YN+L+ Y+ G ++++ + EM K G +P ++Y
Sbjct: 488 KNAMALDVFYILKTKGHGSVSVYNILMEAL-YKMGDIQKSLSLFYEMRKLGFEPDSSSYS 546
Query: 274 ALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILT 312
I +V+ A ++++ C P YL LT
Sbjct: 547 IAICCFVEKGDVKAACSFHEKIIEMS-CVPSIAAYLSLT 584
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 32/310 (10%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLK---EMKRASDMSDSGLVRYAYSDNSYNFVM 61
G+ I Y A++ G C+ ++V++A +L + E + D + AY VM
Sbjct: 398 GYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAY------VVM 451
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
+ L + S++L + EL + + + L+ C +LD V Y +
Sbjct: 452 NR---LSDFSNVLERIGELGYPVSDYLTQFFKLL---CADEEKNAMALD-----VFYILK 500
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
G ++ Y +L+EAL+++G + + EM++ G + D +Y+ + + +
Sbjct: 501 TKGHG---SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGD 557
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMK------TSGIKPDHLS 235
+ A +++++E P++ Y ++ G C+ E + ++ SG P
Sbjct: 558 VKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG--PMEFK 615
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
Y L + + +G ++ +V DEM + G+ Y A+I G+ + ++ A E+ E+
Sbjct: 616 YALTVC-HVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTEL 674
Query: 296 VSKGICTPDD 305
+ + T D
Sbjct: 675 KKRKVMTEAD 684
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 20/275 (7%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGL 67
P + T+ L+ G C + + A +L +EMK + G S N+ G +
Sbjct: 226 PDVCTFNILINGYCRSSKFDLALDLFREMK------EKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
EE + EM+EL T + L+D C +G +D A +++++ +
Sbjct: 280 EEGVKMAYEMIELGCRFSEATC--EILVDGLCREG--------RVDDACGLVLDLLNKRV 329
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
P+ Y L+E L ++ A +M++E+ +KG TL+ G K + G
Sbjct: 330 LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
++M+ I P+ +T+N ++ C ++A +L + G +PD +Y++L++G++
Sbjct: 390 FMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFT 449
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL 279
+ G KE + +EML + P TY+ L+ GL
Sbjct: 450 -KEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVG 145
P+ +Y+T+++ G ++DKA+ + M +P + T+ +LI
Sbjct: 191 PNVGVYNTVVNGYVKSG--------DMDKALRFYQRMGKERAKPDVCTFNILINGYCRSS 242
Query: 146 RSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYN 205
+ A D+ +EM+EKG + +V ++NTL+ G+ I+ + + EM+E + + T
Sbjct: 243 KFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCE 302
Query: 206 TMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK 262
++ G C R +A L + + P Y L+ V+ A + +E+ K
Sbjct: 303 ILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVR-AMEMMEELWK 361
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY-LILTDM 314
G P F L+ GLR + E+A +++M++ GI PD + L+L D+
Sbjct: 362 KGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI-LPDSVTFNLLLRDL 413
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 101/266 (37%), Gaps = 48/266 (18%)
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVG 145
P ++ LI+ C + D A+ EM +G EP +V++ LI G
Sbjct: 226 PDVCTFNILINGYCRSS--------KFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 146 RSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYN 205
+ M EM E G + T L+ G + +D G+ +++ KR+ P+ Y
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 206 TMMLGHC--------------------------------------RCSEAQKLFDKMKTS 227
+++ C R +A +KM +
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
GI PD +++NLL+ + +A R+R G +P TTY L+ G ++
Sbjct: 398 GILPDSVTFNLLLRDLC-SSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 288 AEELLKEMVSKGICTPDDKKYLILTD 313
E L+ EM+ K + PD Y L D
Sbjct: 457 GEVLVNEMLDKDM-LPDIFTYNRLMD 481
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 121/262 (46%), Gaps = 25/262 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M + G +P + ++ L+ G + ++E+ +K A +M + G +S+ + +
Sbjct: 254 MKEKGCEPNVVSFNTLIRGFLSSGKIEEG------VKMAYEMIELGC---RFSEATCEIL 304
Query: 61 ---MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ +EG +++A L+ ++L ++P Y +L+++ C + ++ +A+
Sbjct: 305 VDGLCREGRVDDACGLVLDLLN--KRVLPSEFDYGSLVEKLCGE--------NKAVRAME 354
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
+E+ +G P + T L+E L + GR+ A +++M G+ D T+N L+
Sbjct: 355 MMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLC 414
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHL 234
+ + K +P+ TY+ ++ G R E + L ++M + PD
Sbjct: 415 SSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIF 474
Query: 235 SYNLLIAGYSYRGGYVKEAFRV 256
+YN L+ G S G + ++ R+
Sbjct: 475 TYNRLMDGLSCTGKFSRKQVRM 496
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+MIS+G P + L++ A + G A++++K M+ +GLK DVYTY ++SGYAK
Sbjct: 397 DMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGG 456
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYN 237
+D I E +K + + +TY+ ++ G+C+ EA KL ++M G++P+ YN
Sbjct: 457 MMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYN 516
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGI 265
LI + + ++A + +EM + G+
Sbjct: 517 KLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
+++A LL +M+ G P +++ ++ C G ++D+A M SRG
Sbjct: 388 VKDAKALLLDMIS--KGPAPGNAVFNLVVHACSKTG--------DLDEAKEVLKLMESRG 437
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
++P + TYT++I + G A++++ E ++K KL TY+ L+ GY K + D +
Sbjct: 438 LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEAL 497
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHC----RCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ +EM +QPN YN ++ C +A+ LF++MK G+ + +S L+ A
Sbjct: 498 KLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLIRA 556
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 150 AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMML 209
A++M+ ++ + + + ++ ++ + + + + +M+ K P +N ++
Sbjct: 356 AQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVH 415
Query: 210 GHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID 266
+ EA+++ M++ G+KPD +Y ++I+GY+ +GG + EA + E K
Sbjct: 416 ACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYA-KGGMMDEAQEILAEAKKKHKK 474
Query: 267 PTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
+ TY ALI G E ++A +LL EM G+ P+ +Y
Sbjct: 475 LSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGV-QPNADEY 515
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 8/162 (4%)
Query: 153 MIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEK-RIQPNLLTYNTMMLG- 210
++KEM+E K DV TYN+++ + ++ +G+ M E + N++TYNT++ G
Sbjct: 199 ILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGM 258
Query: 211 --HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPT 268
CR ++++M GI+PD LSY +I R G VKE+ R+ DEM + I P+
Sbjct: 259 RKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLG-RSGNVKESLRLFDEMKQRQIRPS 317
Query: 269 FTTYDALILGLRINHEVEQAEEL---LKEMVSKGICTPDDKK 307
Y ALI L+ + + + A +L LK S + P D K
Sbjct: 318 VYVYRALIDCLKKSGDFQSALQLSDELKNTSSLDLAGPQDFK 359
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEK-GLKLDVYTY 169
+IDK + EM +P ++TY +++ L G ++ M+E + +++ TY
Sbjct: 192 QIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITY 251
Query: 170 NTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM--LGHC-RCSEAQKLFDKMKT 226
NT+++G K D + IY+EMV+ I+P+LL+Y ++ LG E+ +LFD+MK
Sbjct: 252 NTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQ 311
Query: 227 SGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKN 263
I+P Y LI G + + A ++ DE LKN
Sbjct: 312 RQIRPSVYVYRALIDCLKKSGDF-QSALQLSDE-LKN 346
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 52/299 (17%)
Query: 55 NSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDK 114
NS + KE +E A ++ L+L + P ++ LI C + D
Sbjct: 243 NSLMDALVKENSIEHAHEVF---LKLFDTIKPDARTFNILIHGFCKAR--------KFDD 291
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A A D M P +VTYT +EA + G +M++EM+E G +V TY +M
Sbjct: 292 ARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMH 351
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTM---MLGHCRCSEAQKLFDKMKTSGIKP 231
K K + +G+Y++M E P+ Y+++ + R +A ++F+ M G++
Sbjct: 352 SLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRR 411
Query: 232 DHLSYNLLIAG---YSYRGGYVKEAFRVRDE----------------------------- 259
D L YN +I+ +S ++ R+ DE
Sbjct: 412 DVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLG 471
Query: 260 -----MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
M+KN + +TY LI GL ++ +VE+A +E V KG+ P D +L D
Sbjct: 472 ILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGM-VPRDSTCKMLVD 529
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 138/287 (48%), Gaps = 19/287 (6%)
Query: 21 CTHHEVEQAKELLKEMKR--ASDMSDSGL-VRYAYSDNSYNFVMYKEGGLEEASDLLPEM 77
CT H + + E+ R S M +SG+ V YS V+ G + A +L+ EM
Sbjct: 177 CTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEM 236
Query: 78 LELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLL 137
L G+ + + + ++I CC K + +E+D + M + + +Y +L
Sbjct: 237 -GLVKGVKANIVTFKSMIG-CCVK----RWDFEELDLVLKL---MEKESVMLDLDSYKVL 287
Query: 138 IEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRI 197
I+ G+ AE ++ M +K L+++ Y YN +M+GY++ ++ I +Y EM + +
Sbjct: 288 IDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGV 347
Query: 198 QPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAF 254
PN TY +M G C+ EA ++++ + + D Y+ L + YR G + ++
Sbjct: 348 TPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTL-SEECYRVGMIDKSL 406
Query: 255 RVRDEMLKNGIDPTFTTYDALILGL-RINHEVEQAEELLKEMVSKGI 300
V EM+++G P T + L L +N ++A+ L+ +V GI
Sbjct: 407 EVVAEMIRDGFIPGATICERLADSLFEVNR--KEAQMLITIVVKCGI 451
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Query: 111 EIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYN 170
I++A+ M G P+ ++ ++ L + + G+++D N
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 171 TLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
L+ G + ++A + + DE +++ +PN++T++ ++ G C + EA KL ++M+
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
I+PD +++N+LI+G + G V+E + + M G +P TY ++ GL +
Sbjct: 267 RIEPDTITFNILISGLR-KKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 288 AEELLKEMVSKGI 300
A+E++ +M+S G+
Sbjct: 326 AKEMMSQMISWGM 338
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 97/195 (49%), Gaps = 7/195 (3%)
Query: 109 LDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYT 168
DEI K ++ G+E +LI+ L E G A ++ E ++ + +V T
Sbjct: 183 FDEIHKIFVSAPKL---GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMT 239
Query: 169 YNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMK 225
++ L+ G+ + + + M ++RI+P+ +T+N ++ G R E L ++MK
Sbjct: 240 FSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMK 299
Query: 226 TSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEV 285
G +P+ +Y ++ G + + EA + +M+ G+ P+F +Y ++LGL V
Sbjct: 300 VKGCEPNPGTYQEVLYGLLDKKRNL-EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV 358
Query: 286 EQAEELLKEMVSKGI 300
+ + +L++MV+ G
Sbjct: 359 VEMDWVLRQMVNHGF 373
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 95 IDECC----TKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
ID CC KG+ G+L+ A+ DE + P ++T++ LI G+ A
Sbjct: 200 IDACCLNILIKGLCESGNLEA---ALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
+++ M+++ ++ D T+N L+SG K ++ I + + M K +PN TY ++ G
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 211 ---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
R EA+++ +M + G++P LSY ++ G V+ + +R +M+ +G P
Sbjct: 317 LLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLR-QMVNHGFVP 375
Query: 268 -TFTTYDALILGLRINHEVEQA 288
T + + + N++ QA
Sbjct: 376 KTLMWWKVVQCVVSKNNDDSQA 397
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 24/206 (11%)
Query: 3 KVGFDPTITTYKALVLGCCTHHEVEQAKELLKEM----KRASDMSDSGLVRYAYSDNSYN 58
K+G + L+ G C +E A +LL E R + M+ S L+R
Sbjct: 195 KLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRG-------- 246
Query: 59 FVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
+G EEA LL E +E E + P T+ ++ LI G+ KG ++E +
Sbjct: 247 --FCNKGKFEEAFKLL-ERMEKER-IEPDTITFNILIS-----GLRKKGRVEE---GIDL 294
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
+ M +G EP TY ++ L + R+ A++M+ +M G++ +Y ++ G +
Sbjct: 295 LERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCE 354
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTY 204
K + + +MV P L +
Sbjct: 355 TKSVVEMDWVLRQMVNHGFVPKTLMW 380
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 126/287 (43%), Gaps = 45/287 (15%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMY---KE 64
P++ +LV +E++ LLK + + + D+ Y+ V+Y KE
Sbjct: 267 PSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTI---------GYSIVVYAKAKE 317
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKG---------------------- 102
G L A + EML+ G ++ +Y + CC KG
Sbjct: 318 GDLVSARKVFDEMLQ--RGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDE 375
Query: 103 -----IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM 157
IG +K + Y + M++RG+ P+ + +++++ ++ A +++ +
Sbjct: 376 TFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKS 435
Query: 158 QEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEA 217
+KG D +TY+ L+ G+ + ID + ++ EM +++ P + ++++G C C +
Sbjct: 436 IDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKV 495
Query: 218 ---QKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML 261
+K MK I+P+ Y+ LI + + G A RV +EM+
Sbjct: 496 EAGEKYLKIMKKRLIEPNADIYDALIKAFQ-KIGDKTNADRVYNEMI 541
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 15/258 (5%)
Query: 54 DNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEID 113
+ S F + +E +EE+ LL +L ++ DT+ +G L
Sbjct: 272 NTSLVFRVLEEMRIEESMSLLKRLLM-------KNMVVDTIGYSIVVYAKAKEGDLVSAR 324
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM 173
K DEM+ RG YT+ + E G AE ++ EM+E G+ T+N L+
Sbjct: 325 KVF---DEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLI 381
Query: 174 SGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIK 230
G+A+ + + + + MV + + P+ +N M+ + + A ++ K G
Sbjct: 382 GGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFV 441
Query: 231 PDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEE 290
PD +Y+ LI G+ G + +A ++ EM + P F + +LI+GL +VE E+
Sbjct: 442 PDEHTYSHLIRGF-IEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEK 500
Query: 291 LLKEMVSKGICTPDDKKY 308
LK M K + P+ Y
Sbjct: 501 YLKIM-KKRLIEPNADIY 517
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 108/232 (46%), Gaps = 13/232 (5%)
Query: 80 LESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIE 139
++ + P+ + +I C +G + + V D + + P+++ T L+
Sbjct: 226 IDKRIYPNEITIRIMIQVLCKEG--------RLKEVVDLLDRICGKRCLPSVIVNTSLVF 277
Query: 140 ALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQP 199
+ E R + ++K + K + +D Y+ ++ AK + + ++DEM+++
Sbjct: 278 RVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSA 337
Query: 200 NLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRV 256
N Y + C EA++L +M+ SG+ P ++N LI G++ R G+ ++
Sbjct: 338 NSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFA-RFGWEEKGLEY 396
Query: 257 RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKY 308
+ M+ G+ P+ + ++ ++ + V +A E+L + + KG PD+ Y
Sbjct: 397 CEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGF-VPDEHTY 447
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 115/238 (48%), Gaps = 16/238 (6%)
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEM-ISRG 126
E+A +L EM+ G V + +Y L+ G D A + M S
Sbjct: 167 EKAHELFQEMIN--EGCVVNHEVYTALVSAYSRSG--------RFDAAFTLLERMKSSHN 216
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK-YIDAH 185
+P + TY++LI++ +V +D++ +M+ +G++ + TYNTL+ Y K K +++
Sbjct: 217 CQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEME 276
Query: 186 IGIYDEMVEKRIQPNLLTYNTMML---GHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAG 242
+ + E +P+ T N+ + G+ + + ++K ++SGI+P+ ++N+L+
Sbjct: 277 STLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDS 336
Query: 243 YSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
Y G Y K+ V + M K T TY+ +I +++Q E L + M S+ I
Sbjct: 337 YGKSGNY-KKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERI 393
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 134/318 (42%), Gaps = 53/318 (16%)
Query: 19 GCCTHHEVEQAKELLKEMKRAS--DMSDSGLVRYAYSDN------SYNFVM---YKEGGL 67
GC +HEV A L+ R+ D + + L R S N +Y+ ++ +
Sbjct: 180 GCVVNHEVYTA--LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAF 237
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLID----------------------EC------- 98
++ DLL +M G+ P+T+ Y+TLID +C
Sbjct: 238 DKVQDLLSDMRR--QGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTM 295
Query: 99 --CTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKE 156
+ G G ++ ++ ++ S GIEP I T+ +L+++ + G +++
Sbjct: 296 NSTLRAFGGNGQIEMMENCY---EKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEY 352
Query: 157 MQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE 216
MQ+ + TYN ++ + + + ++ M +RI P+ +T +++ + R S+
Sbjct: 353 MQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASK 412
Query: 217 AQKL---FDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYD 273
A K+ ++ S I+ D + +N L+ Y R E V + M K G P TY
Sbjct: 413 ADKIGGVLRFIENSDIRLDLVFFNCLVDAYG-RMEKFAEMKGVLELMEKKGFKPDKITYR 471
Query: 274 ALILGLRINHEVEQAEEL 291
++ RI+ +EL
Sbjct: 472 TMVKAYRISGMTTHVKEL 489
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 5/190 (2%)
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
+P + Y LI L + + A ++ +EM +G ++ Y L+S Y++ DA
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFT 206
Query: 188 IYDEM-VEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ + M QP++ TY+ ++ + + Q L M+ GI+P+ ++YN LI Y
Sbjct: 207 LLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY 266
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
+V+ + + ++ P T ++ + N ++E E ++ S GI P
Sbjct: 267 GKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGI-EP 325
Query: 304 DDKKYLILTD 313
+ + + IL D
Sbjct: 326 NIRTFNILLD 335
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
+ PT+ T+ +L+ GA +++ +QE G+ D Y TL+S AK +DA
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDK---MKTSGIKPDHLSYNLLIAGY 243
++ +M ++ NL T+ ++ G R + K F +++ +KPD + +N LI+
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 244 SYRGGYVKEAFRVRDEMLK--NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ G V AF V EM + IDP + AL+ +VE+A+E+ + + GI
Sbjct: 583 G-QSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGI 640
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 129/303 (42%), Gaps = 18/303 (5%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M G + + T+ AL+ GC +V +A ++ + D R + N+
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPD----RVVF--NALISA 581
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+ G ++ A D+L EM + P + L+ CC G ++++A
Sbjct: 582 CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG--------QVERAKEVYQ 633
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+ GI T YT+ + + + G A + K+M+EK + D ++ L+ K
Sbjct: 634 MIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAK 693
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYN 237
+D GI + + I+ ++Y+++M C + +K L++K+K+ ++P + N
Sbjct: 694 MLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMN 753
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS 297
LI G + +A DE+ G+ P TY L+L + E + +LL +
Sbjct: 754 ALITALC-EGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKG 812
Query: 298 KGI 300
G+
Sbjct: 813 DGV 815
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 112/231 (48%), Gaps = 8/231 (3%)
Query: 73 LLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIV 132
L M+++ G+V + D EC T + + + + +A+ +E S G++ +
Sbjct: 166 LFSFMMDVLKGMVCEGVNPDL---ECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTE 222
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
++ L+ L E A+ + ++ + D +YN ++SG++K ++ + EM
Sbjct: 223 SFNALLRCLCERSHVSAAKSVFNA-KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEM 281
Query: 193 VEKRIQPNLLTYNTMM--LGHC-RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
VE P+ L+Y+ ++ LG R +++ ++FD +K G PD YN +I + +
Sbjct: 282 VESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDF 341
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
E+ R ML +P TY L+ GL +V A E+ +EM+S+G+
Sbjct: 342 -DESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 42/238 (17%)
Query: 102 GIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG 161
G G ++E++K + EM+ G P ++Y+ LIE L GR + ++ ++ KG
Sbjct: 264 GWSKLGEVEEMEKVL---KEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 162 LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQ 218
D YN ++ + + D + Y M+++ +PNL TY+ ++ G + S+A
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDAL 380
Query: 219 KLFDKMKTSGIKP-----------------------------------DHLSYNLLIAGY 243
++F++M + G+ P +Y LL+
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL 440
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
S R G V DEM ++G Y+ ++ GL I +E A +++E + KG C
Sbjct: 441 S-RFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFC 497
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 24/300 (8%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEG 65
+ P++ Y ++ + + A L EM++ + D RY YS +F KEG
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPD----RYTYSTLITSFG--KEG 204
Query: 66 GLEEASDLLPEMLELESGLVPHTLI-YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
+ A L +M E V L+ Y LI+ L + KA++ +
Sbjct: 205 MFDSALSWLQKM---EQDRVSGDLVLYSNLIE--------LSRRLCDYSKAISIFSRLKR 253
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC-KYID 183
GI P +V Y +I + A +IKEM E G+ + +Y+TL+S Y + K+++
Sbjct: 254 SGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLE 313
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLI 240
A + ++ EM E +L T N M+ + + EA +LF ++ I+P+ +SYN ++
Sbjct: 314 A-LSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
Y EA + M + I+ TY+ +I E E+A L++EM S+GI
Sbjct: 373 RVYG-EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGI 431
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 39/263 (14%)
Query: 28 QAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPH 87
+A + +KR+ D LV Y N Y K EA L+ EM E +G++P+
Sbjct: 243 KAISIFSRLKRSGITPD--LVAYNSMINVYG----KAKLFREARLLIKEMNE--AGVLPN 294
Query: 88 TLIYDTLID---------------------------ECCTKGIGTKGSLDEIDKAVAYKD 120
T+ Y TL+ C I G LD + +A
Sbjct: 295 TVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFW 354
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
+ IEP +V+Y ++ E A + + MQ K ++ +V TYNT++ Y K
Sbjct: 355 SLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTM 414
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTM--MLGHC-RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ + EM + I+PN +TY+T+ + G + A LF K+++SG++ D + Y
Sbjct: 415 EHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQ 474
Query: 238 LLIAGYSYRGGYVKEAFRVRDEM 260
+I Y R G + A R+ E+
Sbjct: 475 TMIVAYE-RVGLMGHAKRLLHEL 496
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 103 IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGL 162
I G E +KA EM SRGIEP +TY+ +I + G+ A + ++++ G+
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 466
Query: 163 KLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL--TYNTMMLGHCRCSEAQKL 220
++D Y T++ Y + + + E+ ++ N+ T T++ R EA +
Sbjct: 467 EIDQVLYQTMIVAYERVGLMGHAKRLLHEL---KLPDNIPRETAITILAKAGRTEEATWV 523
Query: 221 FDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLR 280
F + SG D + +I YS YV V ++M G P D+ ++ +
Sbjct: 524 FRQAFESGEVKDISVFGCMINLYSRNQRYVN-VIEVFEKMRTAGYFP-----DSNVIAMV 577
Query: 281 IN-----HEVEQAEELLKEMVSKGICTPDDKKYLILT 312
+N E E+A+ + +EM +G PD+ + +L+
Sbjct: 578 LNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLS 614
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 135/297 (45%), Gaps = 28/297 (9%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGG 66
D + AL++G + + E+A L +M++ V S ++ GG
Sbjct: 236 DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASA------NMGG 289
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
+EE + + +G+ ++ +L++ C G+ + Y + + R
Sbjct: 290 VEEGKQ--SHAIAIVNGMELDNILGTSLLNFYCKVGL------------IEYAEMVFDRM 335
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
E +VT+ L+I + G A M + M+ + LK D T TLMS A+ + +
Sbjct: 336 FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGK 395
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
+ + + +++ +T+M + +C +A+K+FD S ++ D + +N L+A Y
Sbjct: 396 EVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFD----STVEKDLILWNTLLAAY 451
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ G EA R+ M G+ P T++ +IL L N +V++A+++ +M S GI
Sbjct: 452 A-ESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGI 507
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 122/257 (47%), Gaps = 16/257 (6%)
Query: 62 YKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
Y E GL + L ++LE G+ P+ + ++ +I G ++D+A +
Sbjct: 451 YAESGLSGEALRLFYGMQLE-GVPPNVITWNLIILSLLRNG--------QVDEAKDMFLQ 501
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M S GI P ++++T ++ + + G S A +++MQE GL+ + ++ +S A
Sbjct: 502 MQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLAS 561
Query: 182 IDAHIG--IYDEMVEKRIQPNLLTYNTMMLG-HCRCSEAQKLFDKMKTSGIKPDHLSYNL 238
+ HIG I+ ++ +L++ T ++ + +C + K +K+ S + + N
Sbjct: 562 L--HIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA-EKVFGSKLYSELPLSNA 618
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
+I+ Y+ G +KEA + + G+ P T ++ ++ QA E+ ++VSK
Sbjct: 619 MISAYALYGN-LKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSK 677
Query: 299 GICTPDDKKYLILTDMV 315
P + Y ++ D++
Sbjct: 678 RSMKPCLEHYGLMVDLL 694
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
+E ++ + L+ A E G S A + MQ +G+ +V T+N ++ + +D
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHCR--CSEAQKLF-DKMKTSGIKPDHLSYNLLIAGY 243
++ +M I PNL+++ TMM G + CSE LF KM+ SG++P+ S + ++
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 244 SY 245
++
Sbjct: 557 AH 558
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 127/276 (46%), Gaps = 35/276 (12%)
Query: 56 SYNFV---MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEI 112
++N + + + G ++EA D+ +M SG++P+ + + T+++ G+ G +E
Sbjct: 478 TWNLIILSLLRNGQVDEAKDMFLQMQS--SGIIPNLISWTTMMN-----GMVQNGCSEE- 529
Query: 113 DKAVAYKDEMISRGIEPTIVTYTLLIEAL-----FEVGRSWGAEDMIKEMQEKGLKLDVY 167
A+ + +M G+ P + T+ + A +GR+ +I+ +Q L V
Sbjct: 530 --AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGY-IIRNLQHSSL---VS 583
Query: 168 TYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKM 224
+L+ YAKC I+ +++ ++ L N M+ + EA L+ +
Sbjct: 584 IETSLVDMYAKCGDINKA----EKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL 639
Query: 225 KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML-KNGIDPTFTTYDALILGLRINH 283
+ G+KPD+++ +++ ++ G + +A + +++ K + P Y ++ L
Sbjct: 640 EGVGLKPDNITITNVLSACNHAGD-INQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG 698
Query: 284 EVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRER 319
E E+A L++EM K PD + L +++R
Sbjct: 699 ETEKALRLIEEMPFK----PDARMIQSLVASCNKQR 730
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 12/220 (5%)
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
GL P + Y++LID C EI+KA D+M P ++TYT +I L
Sbjct: 241 GLKPDVVTYNSLIDVYCKD--------REIEKAYKLIDKMREEEETPDVITYTTVIGGLG 292
Query: 143 EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLL 202
+G+ A +++KEM+E G DV YN + + + + + DEMV+K + PN
Sbjct: 293 LIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNAT 352
Query: 203 TYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
TYN ++ + +L+ +M + P+ S LI + R V A R+ ++
Sbjct: 353 TYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFK-RHEKVDMAMRLWED 411
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
M+ G D L+ L +VE+AE+ L EMV KG
Sbjct: 412 MVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKG 451
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 165 DVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLF 221
D+ T+N L+SG+ K + ++EM K ++P+++TYN+++ +C+ E A KL
Sbjct: 213 DLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLI 269
Query: 222 DKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRI 281
DKM+ PD ++Y +I G G K A V EM + G P Y+A I I
Sbjct: 270 DKMREEEETPDVITYTTVIGGLGLIGQPDK-AREVLKEMKEYGCYPDVAAYNAAIRNFCI 328
Query: 282 NHEVEQAEELLKEMVSKGICTPDDKKY 308
+ A++L+ EMV KG+ +P+ Y
Sbjct: 329 ARRLGDADKLVDEMVKKGL-SPNATTY 354
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 25/238 (10%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G P + TY +L+ C E+E+A +L+ +M+ + D ++ Y +
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPD--VITYTTVIGGLGLI---- 294
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G ++A ++L EM E G P Y+ I C L + DK V DEM+
Sbjct: 295 GQPDKAREVLKEMKEY--GCYPDVAAYNAAIRNFC-----IARRLGDADKLV---DEMVK 344
Query: 125 RGIEPTIVTYTLLIEALF---EVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
+G+ P TY L L ++GRSW E ++ + + L + + L+ + + +
Sbjct: 345 KGLSPNATTYNLFFRVLSLANDLGRSW--ELYVRMLGNECLP-NTQSCMFLIKMFKRHEK 401
Query: 182 IDAHIGIYDEMVEKRI---QPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSY 236
+D + ++++MV K ++ + EA+K +M G +P ++S+
Sbjct: 402 VDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 459
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 135/311 (43%), Gaps = 29/311 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMK-RASDMSDSGLVRYAYSDNSYNF 59
M G P+ ++ L+ C KEL K ++ R S++S S N +
Sbjct: 337 MDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVC-------NHLIW 389
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIY-------DTLIDECCTKGIGTKGSLDEI 112
+M K A ++ ++L+ G P+ L Y + L+ +GI G
Sbjct: 390 LMGKAKKWWAALEIYEDLLD--EGPEPNNLSYELVVSHFNILLSAASKRGIWRWG----- 442
Query: 113 DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTL 172
V ++M +G++P + ++ A + + A + K M + G K V +Y L
Sbjct: 443 ---VRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGAL 499
Query: 173 MSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTM---MLGHCRCSEAQKLFDKMKTSGI 229
+S K K D +++ M++ I+PNL Y TM + G + + L +M + GI
Sbjct: 500 LSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI 559
Query: 230 KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAE 289
+P +++N +I+G + R G A+ M ++P TY+ LI L + + A
Sbjct: 560 EPSVVTFNAVISGCA-RNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAY 618
Query: 290 ELLKEMVSKGI 300
EL + ++G+
Sbjct: 619 ELHVKAQNEGL 629
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 150 AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKR------IQPNLLT 203
A+D+ +++KG +L + + ++ G+ K K + + + D + K+ I PNL
Sbjct: 131 ADDVDAVLKDKG-ELPLQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFI 189
Query: 204 YNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKN 263
YN+++ EA+K+ M+ GI P+ ++YN L+ Y G ++K A + D +
Sbjct: 190 YNSLLGAMRGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLK-ALGILDLTKEK 248
Query: 264 GIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
G +P TY +L R + A E E+ K
Sbjct: 249 GFEPNPITYSTALLVYRRMEDGMGALEFFVELREK 283
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
I P + Y L+ A+ G AE ++K+M+E+G+ ++ TYNTLM Y + +
Sbjct: 183 IGPNLFIYNSLLGAMRGFGE---AEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKAL 239
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHCR 213
GI D EK +PN +TY+T +L + R
Sbjct: 240 GILDLTKEKGFEPNPITYSTALLVYRR 266
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM + I+PT ++ L+I+ ++ + +++ M E G+ + V TYN ++ K K
Sbjct: 207 EMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRK 266
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ D ++ R++PN +TY+ ++ G C EA LF+ M +G KPD Y
Sbjct: 267 KSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYF 326
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELL 292
LI G + R+ M KN + P+F+ L+ GL +V++A+EL+
Sbjct: 327 TLIHCLCKGGDFETALILCRESMEKNWV-PSFSVMKWLVNGLASRSKVDEAKELI 380
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 131/281 (46%), Gaps = 27/281 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K G P + T+ L+ G + + A +L+++M+ +D S +N +
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGM 332
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDEC-CTKGIGTKGSLDEIDKAVAYK 119
Y +A D+ +M +G+VP+ + + + C C K I + I + +
Sbjct: 333 RY------QALDMFRKMFL--AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI 384
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
D+ ++ L++ + G+ A + ++ K DVYT+N++++GY +
Sbjct: 385 DD---------VLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQA 431
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSG-IKPDHLS 235
Y ++ M + ++PN++T+NTM+ G+ + EA LF +M+ G ++ + +
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT 491
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
+NL+IAGY + G EA + +M + P T +L+
Sbjct: 492 WNLIIAGY-IQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 138/337 (40%), Gaps = 63/337 (18%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M+K G P + ++ GC +VE K + S + G+ NS V
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVI------HSVVIKLGMSSCLRVSNSILAV 225
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G L+ A+ M E + + +++++ C G + ++AV
Sbjct: 226 YAKCGELDFATKFFRRMRERD------VIAWNSVLLAYCQNG--------KHEEAVELVK 271
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EM GI P +VT+ +LI ++G+ A D++++M+ G+ DV+T+ ++SG
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTY-----------------------------------N 205
+ ++ +M + PN +T N
Sbjct: 332 MRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGN 391
Query: 206 TMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK 262
+++ + +C +A+K+FD +K D ++N +I GY + GY +A+ + M
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYC-QAGYCGKAYELFTRMQD 446
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ P T++ +I G N + +A +L + M G
Sbjct: 447 ANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
E + T++ +I A R + + M + G+ D + + ++ G A C ++A
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV 202
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
I+ +++ + L N+++ + +C E A K F +M+ + D +++N ++ Y
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLAYC 258
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
G + +EA + EM K GI P T++ LI G + + A +L+++M + GI
Sbjct: 259 QNGKH-EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV 317
Query: 305 DKKYLILTDMVH 316
+++ ++H
Sbjct: 318 FTWTAMISGLIH 329
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 139/288 (48%), Gaps = 31/288 (10%)
Query: 49 RYAYSDNSYNFVMYKEGGL---EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGT 105
R+ + + SY+ + K G +E D++ ++L + + + +Y+++I G
Sbjct: 167 RFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRH--IGNENLYNSIIFYFTKAG--- 221
Query: 106 KGSLDEIDKAVAYKDEMI-SRGIE--PTIVTYTLLIEALFEVGRSW--------GAEDMI 154
++ +AV M+ S+ +E PTI TY +L +AL G + +
Sbjct: 222 -----KLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLF 276
Query: 155 KEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM-VEKRIQPNLLTYNTMMLGHC- 212
++M + G++ DV+ N L+ GY +++ + I+ +M V +PN TY+ ++ G C
Sbjct: 277 RQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCA 336
Query: 213 --RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFT 270
R A++L +MK G P+ SYN L+ ++ G + +A + EM++NG F
Sbjct: 337 QGRTINARELLSEMKGKGFVPNGKSYNSLVNAFAL-SGEIDDAVKCLWEMIENGRVVDFI 395
Query: 271 TYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
+Y L+ + ++A LL+ + K + D Y L +++H++
Sbjct: 396 SYRTLVDESCRKGKYDEATRLLEMLREKQLV--DRDSYDKLVNVLHKD 441
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 12/189 (6%)
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
S+G P T+T L+ A + + + + +G +V N L+ YAKC I
Sbjct: 306 SQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIP 365
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLI 240
++ E+V++R NL+++ +MM+G H +EA +LFDKM +SGI+PD + + ++
Sbjct: 366 DSQRVFGEIVDRR---NLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVL 422
Query: 241 AGYSYRGGYVKEAFRVRDEMLKN-GIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ + G V++ + + M GI+P Y+ ++ L ++ +A EL++ M K
Sbjct: 423 SACRH-AGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFK- 480
Query: 300 ICTPDDKKY 308
PD+ +
Sbjct: 481 ---PDESTW 486
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 36/303 (11%)
Query: 3 KVGFDPTITTYKALVLGCCTHHEVEQAKELLK-----EMKRASDMSDS--GLVRYAYSDN 55
K+G P + Y+A +L + + +AKE+ + + +D+ D+ G V D+
Sbjct: 286 KLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDS 345
Query: 56 SYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKA 115
+ F++Y + +G +P L C D+ D
Sbjct: 346 AVEFLVYM----------------VSTGKLPAIRTLSKLSKNLCRH--------DKSDHL 381
Query: 116 VAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
+ + + S+G + +Y+L+I L + GR + ++EM+++GL DV YN L+
Sbjct: 382 IKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEA 441
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQ---KLFDKMKTSGIKPD 232
K + I ++DEM + + NL TYN ++ EA+ +LFDKM GI+PD
Sbjct: 442 CCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPD 501
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRV-RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
Y LI G + ++ A V R M ++ T +L L N +A +L
Sbjct: 502 ETIYMSLIEGLC-KETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQL 560
Query: 292 LKE 294
L+E
Sbjct: 561 LRE 563
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 103 IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKE---MQE 159
IG+ ++D D AV + M+S G P I T + L + L +S + +IK +
Sbjct: 335 IGSVSAVDP-DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKS---DHLIKAYELLSS 390
Query: 160 KGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SE 216
KG ++ +Y+ ++S K + EM ++ + P++ YN ++ C+
Sbjct: 391 KGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRP 450
Query: 217 AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
A+KL+D+M G K + +YN+LI S G +E+ R+ D+ML+ GI+P T Y +LI
Sbjct: 451 AKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGE-AEESLRLFDKMLERGIEPDETIYMSLI 509
Query: 277 LGLRINHEVEQAEELLKEMVSK 298
GL ++E A E+ ++ + +
Sbjct: 510 EGLCKETKIEAAMEVFRKCMER 531
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Query: 183 DAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLL 239
D I Y+ + K L +Y+ M+ C R E+ +MK G+ PD YN L
Sbjct: 379 DHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNAL 438
Query: 240 IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
I + ++ A ++ DEM G TTY+ LI L E E++ L +M+ +G
Sbjct: 439 IEACC-KAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERG 497
Query: 300 ICTPDDKKYLILTDMVHRE 318
I PD+ Y+ L + + +E
Sbjct: 498 I-EPDETIYMSLIEGLCKE 515
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 112 IDKAVAYKDEMISR--GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTY 169
DK DE+ R I P ++Y +LI++ + G A +++++MQ KG+++ +
Sbjct: 153 FDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAF 212
Query: 170 NTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS--EAQKLFDKMKTS 227
T++S K ++ +++EMV+K + + YN ++ + S ++L ++M +
Sbjct: 213 TTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSM 272
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
G+KPD +SYN L+ Y R G + EA +V + + N P T+ LI L + EQ
Sbjct: 273 GLKPDTISYNYLMTAYCER-GMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQ 331
Query: 288 AEELLKEMV 296
+ K+ V
Sbjct: 332 GYAIFKKSV 340
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 15/275 (5%)
Query: 28 QAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPH 87
QA M+ M G R A S N+ ++ L E+ + + ++P
Sbjct: 114 QASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPD 173
Query: 88 TLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRS 147
+ Y LI C G +KA+ +M +G+E T + +T ++ +L++ G
Sbjct: 174 KISYGILIKSYCDSGTP--------EKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGEL 225
Query: 148 WGAEDMIKEMQEKGLKLDVYTYNT-LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNT 206
A+++ EM +KG +LD YN +MS A+ + + + +EM ++P+ ++YN
Sbjct: 226 EVADNLWNEMVKKGCELDNAAYNVRIMS--AQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 207 MMLGHCR---CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKN 263
+M +C EA+K+++ ++ + P+ ++ LI Y Y + + + +
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMH 343
Query: 264 GIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
I P F T L++GL N + + A+ L++ + K
Sbjct: 344 KI-PDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 169 YNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE----AQKLFDKM 224
Y+TL+ Y + + + +++M + + +++N + L C S+ +LFD++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNAL-LNACLHSKNFDKVPQLFDEI 163
Query: 225 --KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRIN 282
+ + I PD +SY +LI Y G ++A + +M G++ T + ++ L
Sbjct: 164 PQRYNKIIPDKISYGILIKSYC-DSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKK 222
Query: 283 HEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
E+E A+ L EMV KG C D+ Y + +E
Sbjct: 223 GELEVADNLWNEMVKKG-CELDNAAYNVRIMSAQKE 257
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 130 TIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIY 189
+VT+T ++ + AE + +EM E+ +V ++NT++ GYA+ ID + ++
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELF 163
Query: 190 DEMVEKRIQPNLLTYNTM---MLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYR 246
DEM E+ N++++N+M ++ R EA LF++M + D +S+ ++ G + +
Sbjct: 164 DEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLA-K 214
Query: 247 GGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICT 302
G V EA R+ D M + I +++A+I G N+ +++A++L + M + +
Sbjct: 215 NGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMPERDFAS 266
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 144/314 (45%), Gaps = 39/314 (12%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEE 69
+ ++ A+V G + +V++A+ L M + +S + ++ Y+ N+ ++E
Sbjct: 202 VVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMI-TGYAQNNR---------IDE 251
Query: 70 ASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEP 129
A L M E + ++T+I T I + E++KA D M E
Sbjct: 252 ADQLFQVMPERDFA------SWNTMI----TGFIRNR----EMNKACGLFDRMP----EK 293
Query: 130 TIVTYTLLIEALFEVGRSWGAEDMIKEMQEKG-LKLDVYTYNTLMSGYAKCKYIDAHIGI 188
++++T +I E + A ++ +M G +K +V TY +++S + + I
Sbjct: 294 NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQI 353
Query: 189 YDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGI--KPDHLSYNLLIAGY 243
+ + + Q N + + ++ + + E A+K+FD +G+ + D +S+N +IA Y
Sbjct: 354 HQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFD----NGLVCQRDLISWNSMIAVY 409
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
++ G + KEA + ++M K+G P+ TY L+ VE+ E K++V
Sbjct: 410 AHHG-HGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPL 468
Query: 304 DDKKYLILTDMVHR 317
++ Y L D+ R
Sbjct: 469 REEHYTCLVDLCGR 482
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 28/174 (16%)
Query: 153 MIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC 212
M K M+E + +D YN ++ G K D I+ ++ +QP++ TYN MM+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYN-MMIRFS 59
Query: 213 RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYR--------------------GGYVKE 252
A+KL+ +M G+ PD ++YN +I G + GY K
Sbjct: 60 SLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCK- 118
Query: 253 AFRVRD------EMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
A RV+D EM + GI TY LI G R + A ++ +EMVS G+
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGV 172
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 56 SYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKA 115
+YN +M + L A L EM+ GLVP T+ Y+++I C + +++ +A
Sbjct: 51 TYN-MMIRFSSLGRAEKLYAEMIR--RGLVPDTITYNSMIHGLCKQ--------NKLAQA 99
Query: 116 VAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
R + + T+ LI + R ++ EM +G+ +V TY TL+ G
Sbjct: 100 ---------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHG 150
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK 219
+ + + + I+ EMV + + +T+ ++ C E +K
Sbjct: 151 FRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRK 194
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH 185
GI+ V++ + I++ E+G GA ++EM++ GL DV TY TL+S K +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 186 IGIYDEMVEKRIQPNLLTYNT---MMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAG 242
G+++ MV K +PNL T+N ++ R +A L M ++PD ++YN++I G
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 243 YSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
+ + + A RV M G P Y +I
Sbjct: 292 F-FLARFPDMAERVYTAMHGKGYKPNLKIYQTMI 324
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 19/144 (13%)
Query: 77 MLELE-SGLVPHTLIYDTLID-----ECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPT 130
M E+E SGL P + Y TLI E C G G + M+ +G +P
Sbjct: 200 MREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW-------------NLMVLKGCKPN 246
Query: 131 IVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD 190
+ T+ + I+ L R+W A D++ M + ++ D TYN ++ G+ ++ D +Y
Sbjct: 247 LTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYT 306
Query: 191 EMVEKRIQPNLLTYNTMMLGHCRC 214
M K +PNL Y TM+ C+
Sbjct: 307 AMHGKGYKPNLKIYQTMIHYLCKA 330
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 91 YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
++ I C GI +D A EM G+ P +VTYT LI AL++ R
Sbjct: 180 FNIAIKSFCELGI--------LDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
+ M KG K ++ T+N + + + M + +++P+ +TYN ++ G
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 211 H--CRCSE-AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
R + A++++ M G KP+ Y +I Y + G A+ + + ++ P
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIH-YLCKAGNFDLAYTMCKDCMRKKWYP 350
Query: 268 TFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMV 315
T + L+ GL +++QA+ ++ E+V + + K+ L L ++
Sbjct: 351 NLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPPFRSKQLLSLKSIL 397
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 119/250 (47%), Gaps = 16/250 (6%)
Query: 69 EASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS-RGI 127
+ + LL E++ L GL P +Y +LI G + +DKA + + M S
Sbjct: 161 DQASLLFEVM-LSEGLKPTIDVYTSLI--------SVYGKSELLDKAFSTLEYMKSVSDC 211
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
+P + T+T+LI ++GR + ++ EM G+ TYNT++ GY K +
Sbjct: 212 KPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMES 271
Query: 188 IYDEMVEKRIQ-PNLLTYNTMMLGHCRCSEAQKL---FDKMKTSGIKPDHLSYNLLIAGY 243
+ +M+E P++ T N+++ + +K+ + + + G++PD ++N+LI +
Sbjct: 272 VLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSF 331
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
G Y K+ V D M K T TY+ +I +E+ +++ ++M +G+ P
Sbjct: 332 GKAGMY-KKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGV-KP 389
Query: 304 DDKKYLILTD 313
+ Y L +
Sbjct: 390 NSITYCSLVN 399
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 128/302 (42%), Gaps = 31/302 (10%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM---YKE 64
P + T+ L+ CC + K ++ EM + S +YN ++ K
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEM---------SYLGVGCSTVTYNTIIDGYGKA 263
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGI-GTKGSLDEIDKAVAYKDEMI 123
G EE +L +M+E G D+L D C I G+ G+ + K ++
Sbjct: 264 GMFEEMESVLADMIE--DG--------DSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQ 313
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
G++P I T+ +LI + + G ++ M+++ L TYN ++ + K I+
Sbjct: 314 LMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIE 373
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKL---FDKMKTSGIKPDHLSYNLLI 240
++ +M + ++PN +TY +++ + + K+ ++ S + D +N +I
Sbjct: 374 KMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCII 433
Query: 241 AGYSYRG--GYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
Y G +KE + +M + P T+ +I + + +EL K+M+S
Sbjct: 434 NAYGQAGDLATMKELY---IQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISS 490
Query: 299 GI 300
I
Sbjct: 491 DI 492
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 138/323 (42%), Gaps = 36/323 (11%)
Query: 6 FDPTITTYKALVLGCCTHHEVEQAKELLKEMKRAS-DMSDSGLVRYAYSDNSYNFVMYKE 64
+ PT Y+ L +H + E ++LK+MK S D+S L + Y K
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETL---CFIIEQYG----KN 159
Query: 65 GGLEEASDLLPEMLELESGLVPHTL-------IYDTLIDECCTKGIGTKGSLDEIDKAVA 117
G +++A +EL +G VP TL +Y++L+ C + A A
Sbjct: 160 GHVDQA-------VELFNG-VPKTLGCQQTVDVYNSLLHALC--------DVKMFHGAYA 203
Query: 118 YKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYA 177
MI +G++P TY +L+ G+ A++ + EM +G + L+ G
Sbjct: 204 LIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLL 263
Query: 178 KCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTS---GIKPDHL 234
Y+++ + +M + P++ T+N ++ + E + + T+ G+ D
Sbjct: 264 NAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDID 323
Query: 235 SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
+Y LI S + G + EAFR+ + +++G P + Y +I G+ N + A +
Sbjct: 324 TYKTLIPAVS-KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSD 382
Query: 295 MVSKGICTPDDKKYLILTDMVHR 317
M K P+ Y +L M R
Sbjct: 383 MKVKA-HPPNRPVYTMLITMCGR 404
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 122/299 (40%), Gaps = 26/299 (8%)
Query: 4 VGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYK 63
+G T+ Y +L+ C A L++ M R D YA N +
Sbjct: 176 LGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRT--YAILVNGW----CS 229
Query: 64 EGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMI 123
G ++EA + L EM G P D LI+ G+ G L+ + V+ +M
Sbjct: 230 AGKMKEAQEFLDEMSR--RGFNPPARGRDLLIE-----GLLNAGYLESAKEMVS---KMT 279
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
G P I T+ +LIEA+ + G +M + GL +D+ TY TL+ +K ID
Sbjct: 280 KGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKID 339
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLI 240
+ + VE +P Y ++ G CR +A F MK P+ Y +LI
Sbjct: 340 EAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI 399
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLR------INHEVEQAEELLK 293
RGG +A EM + G+ P +D + GL+ + +EQ E L+
Sbjct: 400 T-MCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQLEVQLR 457
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 15/247 (6%)
Query: 74 LPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVT 133
+P+ LE+ ++ + D ++ + GS++ K DEM R +V+
Sbjct: 123 IPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVF---DEMPVR----DLVS 175
Query: 134 YTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMV 193
+ ++I VG A M K M +G+ D YT L+S A ++ + ++
Sbjct: 176 WNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIAC 235
Query: 194 EKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYV 250
+ R + + N ++ + +C A +F+ M+ K D L++N +I GY G V
Sbjct: 236 DIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR----KRDVLTWNSMIIGYGVHGHGV 291
Query: 251 KEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLI 310
EA +M+ +G+ P T+ L+LG V++ E + M S+ TP+ K Y
Sbjct: 292 -EAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGC 350
Query: 311 LTDMVHR 317
+ D+ R
Sbjct: 351 MVDLYGR 357
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 29/287 (10%)
Query: 1 MLKVGFDPTITTYKALVLGCCTH--HEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYN 58
M +G P+ +T+K L+ C VE+A +EM R+ + D LV+ Y
Sbjct: 739 MKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQ------DYL 792
Query: 59 FVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
+ + G ++A L + ++ P T+ Y I C G ++++A++
Sbjct: 793 GCLCEVGNTKDAKSCLDSLGKIG---FPVTVAYSIYIRALCRIG--------KLEEALS- 840
Query: 119 KDEMISRGIEPTIV---TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
E+ S E +++ TY ++ L + G A D + M+E G K V+ Y +L+
Sbjct: 841 --ELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVY 898
Query: 176 YAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPD 232
+ K K ++ + +M + +P+++TY M+ G+ + EA F M+ G PD
Sbjct: 899 FFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPD 958
Query: 233 HLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL 279
+Y+ I + ++A ++ EML GI P+ + + GL
Sbjct: 959 FKTYSKFINCLC-QACKSEDALKLLSEMLDKGIAPSTINFRTVFYGL 1004
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 21/267 (7%)
Query: 41 DMSDSGLVRYAYSDNSYNFVMYKEGG--LEEASDLLPEMLELESGLVPHTLIYDTLIDEC 98
+M D GL+ + + V+ ++ G +EEA+ EM+ SG VP + +
Sbjct: 738 EMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIR--SGFVPDRELVQDYLGCL 795
Query: 99 CTKG--IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKE 156
C G K LD + K + + P V Y++ I AL +G+ A +
Sbjct: 796 CEVGNTKDAKSCLDSLGK-IGF----------PVTVAYSIYIRALCRIGKLEEALSELAS 844
Query: 157 MQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE 216
+ + LD YTY +++ G + + + + M E +P + Y ++++ + +
Sbjct: 845 FEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQ 904
Query: 217 AQKLFD---KMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYD 273
+K+ + KM+ +P ++Y +I GY G V+EA+ M + G P F TY
Sbjct: 905 LEKVLETCQKMEGESCEPSVVTYTAMICGY-MSLGKVEEAWNAFRNMEERGTSPDFKTYS 963
Query: 274 ALILGLRINHEVEQAEELLKEMVSKGI 300
I L + E A +LL EM+ KGI
Sbjct: 964 KFINCLCQACKSEDALKLLSEMLDKGI 990
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 22/298 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M++ G + TYK L+ +V+ + + +M R ++S+ + Y S+
Sbjct: 285 MMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDA--FGYLLKSFCV- 341
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
G ++EA +L+ E+ E + D E KG+ + +D A+ D
Sbjct: 342 ---SGKIKEALELIRELKNKE-------MCLDAKYFEILVKGLCRANRM--VD-ALEIVD 388
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
M R ++ + V Y ++I A + + +++ G V TY +M K K
Sbjct: 389 IMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLK 447
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYN 237
+ +++EM+E I+P+ + ++ GH R +EA K+F M+ GIKP SY+
Sbjct: 448 QFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYS 507
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
+ + R E ++ ++M + I + +I + N E E+ L+KE+
Sbjct: 508 IFVKELC-RSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKI-HLIKEI 563
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 41/240 (17%)
Query: 103 IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGL 162
I G +I K + ++M G E Y ++I +L GR A + KEM EKG+
Sbjct: 231 ISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGI 290
Query: 163 KLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVE---------------------------- 194
+ TY L+ AK + +D I D+MV
Sbjct: 291 TFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALE 350
Query: 195 -------KRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
K + + + ++ G CR + +A ++ D MK + ++ Y ++I+GY
Sbjct: 351 LIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGY- 408
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
R V +A + + K+G P +TY ++ L + E+ L EM+ GI PD
Sbjct: 409 LRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI-EPD 467
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 141/322 (43%), Gaps = 26/322 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K G D I T+ L+ +AK++ K + M SG + +YN +
Sbjct: 215 MEKNGCDKDIRTWTILI------SVYGKAKKIGKGLLVFEKMRKSG---FELDATAYN-I 264
Query: 61 MYKEGGLEEASDLLPEMLE--LESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAY 118
M + + DL E + +E G+ Y L+D C K +++D +
Sbjct: 265 MIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLD-CIAKS-------EKVDVVQSI 316
Query: 119 KDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAK 178
D+M+ + L+++ G+ A ++I+E++ K + LD + L+ G +
Sbjct: 317 ADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCR 376
Query: 179 CKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKMKTSGIKPDHLS 235
+ + I D M +++ + + Y ++ G+ R S+A + F+ +K SG +P +S
Sbjct: 377 ANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSG-RPPRVS 434
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
I + ++ ++ + +EM++NGI+P A++ G + V +A ++ M
Sbjct: 435 TYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSM 494
Query: 296 VSKGICTPDDKKYLILTDMVHR 317
KGI P K Y I + R
Sbjct: 495 EEKGI-KPTWKSYSIFVKELCR 515
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 11/190 (5%)
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M +G+ VTYT LI + G GA + +EM++ G + V +Y M
Sbjct: 148 MKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGR 207
Query: 182 IDAHIGIYDEMVEKRIQPNLLTYNTMM---LGHCRCSEAQKLFDKMKTSGIKPDHLSYNL 238
++ +Y EM+ R+ PN TY +M + +C EA +F KM+ G++PD + N+
Sbjct: 208 VEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNI 267
Query: 239 LIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVS- 297
LIA + + G RV M +NG+ Y + L ++++LL+E+ S
Sbjct: 268 LIAK-ALKFGETSFMTRVLVYMKENGV---VLRYPIFVEALETLKAAGESDDLLREVNSH 323
Query: 298 ---KGICTPD 304
+ +C+ D
Sbjct: 324 ISVESLCSSD 333
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 147 SWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNT 206
+W A Q KG K D +TY T++ + + I + ++ M EK + + +TY +
Sbjct: 110 NWAA-------QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTS 162
Query: 207 MMLGHCRCSE-----AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML 261
++ H S A +L+++M+ +G +P +SY + + G V+EA V EML
Sbjct: 163 LI--HWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKML-FADGRVEEATEVYKEML 219
Query: 262 KNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
++ + P TY L+ L + E+A ++ +M G+ PD
Sbjct: 220 RSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGV-QPD 261
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 130/268 (48%), Gaps = 44/268 (16%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDN-SYNFVMYKEG 65
+P + +L+ + + QA + EM+R GL ++DN +Y F++
Sbjct: 79 EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRF------GL----FADNFTYPFLLKACS 128
Query: 66 GLEEASDLLPEMLELES-----GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
G LP + + + GL + + LID C G G D +
Sbjct: 129 G----QSWLPVVKMMHNHIEKLGLSSDIYVPNALID--CYSRCGGLGVRDAM-------- 174
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
++ + E V++ ++ L + G A + EM ++ D+ ++NT++ GYA+C+
Sbjct: 175 KLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCR 230
Query: 181 YIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYN 237
+ ++++M E+ N ++++TM++G+ + + A+ +FDKM + +++
Sbjct: 231 EMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWT 284
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKNGI 265
++IAGY+ + G +KEA R+ D+M+ +G+
Sbjct: 285 IIIAGYAEK-GLLKEADRLVDQMVASGL 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 99 CTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSW--GAEDMIKE 156
C I + +A EM G+ TY L++A G+SW + M
Sbjct: 85 CNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC--SGQSWLPVVKMMHNH 142
Query: 157 MQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM--VEKRIQPNLLTYNTMMLGHCRC 214
+++ GL D+Y N L+ Y++C +G+ D M EK + + +++N+M+ G +
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRC----GGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKA 198
Query: 215 SE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTT 271
E A++LFD+M + D +S+N ++ GY+ R + +AF + ++M + +
Sbjct: 199 GELRDARRLFDEMP----QRDLISWNTMLDGYA-RCREMSKAFELFEKMPERNT----VS 249
Query: 272 YDALILGLRINHEVEQAEELLKEM 295
+ +++G ++E A + +M
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKM 273
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Query: 130 TIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIY 189
+VT+T++I E G A+ ++ +M GLK D ++++ + + + I+
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 190 DEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
+ + N N ++ + +C +K FD K D +S+N ++ G G+
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVH-GH 396
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALI 276
KEA + M + GI P T+ A++
Sbjct: 397 GKEAIELFSRMRREGIRPDKVTFIAVL 423
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 34/246 (13%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGG 66
P + + A++ C ++V A+E+ +M LVR S N K G
Sbjct: 169 QPNLVAWNAVITACFRGNDVAGAREIFDKM----------LVRNHTSWNVMLAGYIKAGE 218
Query: 67 LEEASDLLPEMLELESGLVPHT--LIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
LE A + EM PH + + T+I GI GS +E + Y E+
Sbjct: 219 LESAKRIFSEM--------PHRDDVSWSTMI-----VGIAHNGSFNE---SFLYFRELQR 262
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
G+ P V+ T ++ A + G + + +++ G V N L+ Y++C +
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIA 241
+++ M EKR ++++ +M+ G H + EA +LF++M G+ PD +S+ L+
Sbjct: 323 ARLVFEGMQEKRC---IVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLH 379
Query: 242 GYSYRG 247
S+ G
Sbjct: 380 ACSHAG 385
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%), Gaps = 26/224 (11%)
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG-IEPTIVTYTLLIEALFEV 144
P +++TL+ +G DE +VA EM+ +G + P ++ +I+A+
Sbjct: 68 PDAFMFNTLV-----RGYSES---DEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENF 119
Query: 145 GRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTY 204
M + + GL+ ++ TL+ Y C ++ ++DEM QPNL+ +
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH----QPNLVAW 175
Query: 205 NTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML 261
N ++ R ++ A+++FDKM + +H S+N+++AGY + G ++ A R+ EM
Sbjct: 176 NAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGY-IKAGELESAKRIFSEMP 230
Query: 262 KNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDD 305
D +++T +I+G+ N ++ +E+ G+ +P++
Sbjct: 231 HRD-DVSWST---MIVGIAHNGSFNESFLYFRELQRAGM-SPNE 269
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 27/302 (8%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVM--YKEGGL 67
+ + L+ CT E+++A+ + +++ R+ + N ++ +KE G
Sbjct: 176 VDEFNILLRAFCTEREMKEARSIFEKLHS----------RFNPDVKTMNILLLGFKEAGD 225
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
A++L + ++ G P+++ Y ID C K +A+ ++M
Sbjct: 226 VTATELFYHEM-VKRGFKPNSVTYGIRIDGFCKK--------RNFGEALRLFEDMDRLDF 276
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
+ T+ T LI A + E+ ++GL D YN LMS KC + I
Sbjct: 277 DITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIK 336
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCRCSE-----AQKLFDKMKTSGIKPDHLSYNLLIAG 242
+ EM EK I+P+ +T+++M +G + E + + KMK + P + +L+
Sbjct: 337 VMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKL 396
Query: 243 YSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICT 302
+ + G V + ML+ G P + L L A E + V +G C
Sbjct: 397 FCH-NGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCV 455
Query: 303 PD 304
+
Sbjct: 456 SE 457
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 128/304 (42%), Gaps = 26/304 (8%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K P ++ L+ C H +E+A+E + K+ + G +N +
Sbjct: 215 MDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEG----------FNVI 264
Query: 61 MYKEGGL----EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV 116
+ + EA + EM + P+ Y +I C +G + ++
Sbjct: 265 LNGWCNIWTDVTEAKRIWREMGNY--CITPNKDSYSHMIS--CFSKVGN------LFDSL 314
Query: 117 AYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGY 176
DEM RG+ P I Y L+ L A ++K++ E+GLK D TYN+++
Sbjct: 315 RLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPL 374
Query: 177 AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSY 236
+ +D + M+ + + P + T++ L + ++ +MK S + P ++
Sbjct: 375 CEAGKLDVARNVLATMISENLSPTVDTFHA-FLEAVNFEKTLEVLGQMKISDLGPTEETF 433
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMV 296
LLI G ++G + A ++ EM + I Y A I GL +E+A E+ EM
Sbjct: 434 -LLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMK 492
Query: 297 SKGI 300
SKG
Sbjct: 493 SKGF 496
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 140/311 (45%), Gaps = 36/311 (11%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEE 69
+ T+ A+V G + VE+A+EL +M +++S + ++ Y +G E
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAML-----------AGYVQGERME 329
Query: 70 ASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEP 129
+ L +++ + +T+I T +C +I +A D+M R +P
Sbjct: 330 MAKELFDVMPCRNVSTWNTMI--TGYAQC-----------GKISEAKNLFDKMPKR--DP 374
Query: 130 TIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIY 189
V++ +I + G S+ A + +M+ +G +L+ ++++ +S A ++ ++
Sbjct: 375 --VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLH 432
Query: 190 DEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYR 246
+V+ + N ++L +C+C EA LF +M I +S+N +IAGYS R
Sbjct: 433 GRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI----VSWNTMIAGYS-R 487
Query: 247 GGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDK 306
G+ + A R + M + G+ P T A++ V++ + M P+ +
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQ 547
Query: 307 KYLILTDMVHR 317
Y + D++ R
Sbjct: 548 HYACMVDLLGR 558
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 67/285 (23%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEE 69
+ ++ ++ G + V+ A+ + M +D+S + L+ AY NS +EE
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLS-AYVQNS---------KMEE 206
Query: 70 ASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEP 129
A L L+ C G K +I +A + D M R
Sbjct: 207 ACMLFKSRENW------------ALVSWNCLLGGFVKKK--KIVEARQFFDSMNVR---- 248
Query: 130 TIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIY 189
+V++ +I + G+ D +++ ++ DV+T+ ++SGY + + ++ ++
Sbjct: 249 DVVSWNTIITGYAQSGKI----DEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 190 DEMVEKR-------------------------IQP--NLLTYNTMMLGHCRC---SEAQK 219
D+M E+ + P N+ T+NTM+ G+ +C SEA+
Sbjct: 305 DKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKN 364
Query: 220 LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNG 264
LFDKM K D +S+ +IAGYS + G+ EA R+ +M + G
Sbjct: 365 LFDKMP----KRDPVSWAAMIAGYS-QSGHSFEALRLFVQMEREG 404
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 30/221 (13%)
Query: 98 CCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEM 157
C K +G +G + E A+A M +P + Y +I AL VG A ++ +M
Sbjct: 170 CLMKCLGEEGFVKE---ALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 158 QEKGLKL--DVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS 215
Q G + D YTY L+S Y C+Y G + + +R+
Sbjct: 227 QLPGFRYPPDTYTYTILISSY--CRY-GMQTGC-RKAIRRRMW----------------- 265
Query: 216 EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDAL 275
EA ++F +M G PD ++YN LI G + + A + ++M G P TY++
Sbjct: 266 EANRMFREMLFRGFVPDVVTYNCLIDGCC-KTNRIGRALELFEDMKTKGCVPNQVTYNSF 324
Query: 276 ILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVH 316
I + +E+E A E+++ M G P Y T ++H
Sbjct: 325 IRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTY---TPLIH 362
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 105/269 (39%), Gaps = 56/269 (20%)
Query: 63 KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEM 122
+EG ++EA M E P Y+T+I+ C G KA D+M
Sbjct: 177 EEGFVKEALATFYRMKEYHCK--PDVYAYNTIINALCRVG--------NFKKARFLLDQM 226
Query: 123 ISRGIE--PTIVTYTLLIEALFEVG-----------RSWGAEDMIKEMQEKGLKLDVYTY 169
G P TYT+LI + G R W A M +EM +G DV TY
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 170 NTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGI 229
N L+ G K I + ++++M K PN +TYN+ + + +E + + M+T
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM-- 344
Query: 230 KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAE 289
+ L +G+ P +TY LI L +A
Sbjct: 345 -----------------------------KKLGHGV-PGSSTYTPLIHALVETRRAAEAR 374
Query: 290 ELLKEMVSKGICTPDDKKYLILTDMVHRE 318
+L+ EMV G+ P + Y ++ D + E
Sbjct: 375 DLVVEMVEAGL-VPREYTYKLVCDALSSE 402
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
ML GF P + TY L+ GCC + + +A EL + DM G V + NS+
Sbjct: 274 MLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFE------DMKTKGCVPNQVTYNSFIRY 327
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
+E A +++ M +L G VP + Y LI +L E +A +D
Sbjct: 328 YSVTNEIEGAIEMMRTMKKLGHG-VPGSSTYTPLIH-----------ALVETRRAAEARD 375
Query: 121 ---EMISRGIEPTIVTYTLLIEALFEVG-RSWGAEDMIKEMQE 159
EM+ G+ P TY L+ +AL G S E++ K M+E
Sbjct: 376 LVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMRE 418
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 9/223 (4%)
Query: 81 ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEA 140
+ G P + Y +I+ C + ++A+ + +EM R +P+ + LI
Sbjct: 260 DEGFEPDVVAYGIIINAHC--------KAKKYEEAIRFFNEMEQRNCKPSPHIFCSLING 311
Query: 141 LFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPN 200
L + A + + + G L+ TYN L+ Y + ++ DEM K + PN
Sbjct: 312 LGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPN 371
Query: 201 LLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEM 260
TY+ ++ R +++ ++ +T +P +Y +++ + + + A ++ DEM
Sbjct: 372 ARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNK-ERLDMAIKIWDEM 430
Query: 261 LKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
G+ P + +LI L +++++A E EM+ GI P
Sbjct: 431 KGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPP 473
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 156 EMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGH---- 211
+M+E G K++ +N ++ +K + + ++D+M +KR +P++ +Y ++ G
Sbjct: 187 KMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQEL 246
Query: 212 --CRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTF 269
R E + +MK G +PD ++Y ++I + Y +EA R +EM + P+
Sbjct: 247 NLLRVDEVNR---EMKDEGFEPDVVAYGIIINAHCKAKKY-EEAIRFFNEMEQRNCKPSP 302
Query: 270 TTYDALILGLRINHEVEQAEELLKEMVSKGI 300
+ +LI GL ++ A E + S G
Sbjct: 303 HIFCSLINGLGSEKKLNDALEFFERSKSSGF 333
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 85 VPHTLI-YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISR--GIEPTIVTYTLLIEAL 141
P T++ ++ L+ C D ++ DE R I P ++Y +LI++
Sbjct: 133 TPRTVVSFNALLAACLHS--------DLFERVPQLFDEFPQRYNNITPDKISYGMLIKSY 184
Query: 142 FEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNL 201
+ G+ A +++++M+ KG+++ + + T++ K +D ++ EMV K +
Sbjct: 185 CDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDN 244
Query: 202 LTYNTMMLGHCRCS--EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDE 259
YN ++ + S ++L ++M + G+KPD +SYN L+ Y + G + EA +V +
Sbjct: 245 TVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVK-GMMSEAKKVYEG 303
Query: 260 MLKNGIDPTFTTYDALILGLRINHEVEQAEELLKE 294
+ + P T+ LI L IN +Q + K+
Sbjct: 304 LEQ----PNAATFRTLIFHLCINGLYDQGLTVFKK 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 36 MKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLI 95
MK +M G R S N+ E L E + + + P + Y LI
Sbjct: 122 MKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLI 181
Query: 96 DECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIK 155
C G + +KA+ +M +G+E TI+ +T ++ +L++ G AE +
Sbjct: 182 KSYCDSG--------KPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWI 233
Query: 156 EMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC--- 212
EM KG LD YN + AK + + + +EM ++P+ ++YN +M +C
Sbjct: 234 EMVNKGCDLDNTVYNVRLMNAAK-ESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKG 292
Query: 213 RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTY 272
SEA+K+++ ++ +P+ ++ LI G Y + + + + I P F T
Sbjct: 293 MMSEAKKVYEGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKI-PDFKTC 347
Query: 273 DALILGLRINHEVEQA 288
L GL N+ +E A
Sbjct: 348 KHLTEGLVKNNRMEDA 363
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 113 DKAVAYKDEMISRGIEPTIVTYT--LLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTY- 169
DKA+A + + P Y L ++ L + R E +I E + K+ T+
Sbjct: 47 DKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALI-ESHKNNPKIKTETFL 105
Query: 170 NTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE----AQKLFDKM- 224
+TL+ Y + D + +++EM + ++++N + L C S+ +LFD+
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNAL-LAACLHSDLFERVPQLFDEFP 164
Query: 225 -KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINH 283
+ + I PD +SY +LI Y G ++A + +M G++ T + ++ L N
Sbjct: 165 QRYNNITPDKISYGMLIKSYC-DSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNG 223
Query: 284 EVEQAEELLKEMVSKGICTPDDKKY 308
V++AE L EMV+KG C D+ Y
Sbjct: 224 LVDEAESLWIEMVNKG-CDLDNTVY 247
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 111/280 (39%), Gaps = 56/280 (20%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDS--------GLVRYAY 52
M VG P T+ +L+ C VEQA L +EM + +S V
Sbjct: 400 MKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQ 459
Query: 53 SDNSYN-FVMYKEGGLEE---ASDLL-------PEMLELES--GLV-------------- 85
D ++ F +K + E A D++ P +L+ LV
Sbjct: 460 YDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKR 519
Query: 86 ----PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEAL 141
P T Y+ L+ C T K +DE M S G+ P +T++ LI+
Sbjct: 520 FCFKPTTATYNILLKACGTDYYRGKELMDE----------MKSLGLSPNQITWSTLIDMC 569
Query: 142 FEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNL 201
G GA +++ M G + DV Y T + A+ K + +++EM +I+PN
Sbjct: 570 GGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNW 629
Query: 202 LTYNTMMLGHCR------CSEAQKLFDKMKTSGIKP-DHL 234
+TYNT++ + + ++ M+ +G KP DH
Sbjct: 630 VTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHF 669
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRY-AYSDNSYNFVMYKEGGLE 68
+T+Y L+ CC V+ A+++ KE KR M SGL++ A++ + V +
Sbjct: 335 MTSYNILLKTCCLAGRVDLAQDIYKEAKR---MESSGLLKLDAFTYCTIIKVFADAKMWK 391
Query: 69 EASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIE 128
A + +M + G+ P+T + +LI C G+ +++A +EM++ G E
Sbjct: 392 WALKVKDDMKSV--GVTPNTHTWSSLISACANAGL--------VEQANHLFEEMLASGCE 441
Query: 129 PTIVTYTLLIEAL---------FEVGRSWG---------AEDMIKE--------MQEKG- 161
P + +L+ A F + +SW A+D++ + ++ G
Sbjct: 442 PNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGP 501
Query: 162 --------------------LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNL 201
K TYN L+ Y + DEM + PN
Sbjct: 502 GSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKE--LMDEMKSLGLSPNQ 559
Query: 202 LTYNT---MMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRD 258
+T++T M G A ++ M ++G +PD ++Y I +K AF + +
Sbjct: 560 ITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIK-ICAENKCLKLAFSLFE 618
Query: 259 EMLKNGIDPTFTTYDALILGLRINH----EVEQAEELLKEMVSKGICTPDD 305
EM + I P + TY+ L L R + EV Q + ++M + G P+D
Sbjct: 619 EMRRYQIKPNWVTYNTL-LKARSKYGSLLEVRQCLAIYQDMRNAGY-KPND 667
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 25/173 (14%)
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH-----IGIYDEMVEKRIQPNLLTYN 205
ED++KE +K ++Y N+LM+ +++H + +Y M + ++ +YN
Sbjct: 291 EDLLKE----NIKPNIYVINSLMN-------VNSHDLGYTLKVYKNMQILDVTADMTSYN 339
Query: 206 TMMLGHC---RCSEAQKLFD---KMKTSGI-KPDHLSYNLLIAGYSYRGGYVKEAFRVRD 258
++ C R AQ ++ +M++SG+ K D +Y +I ++ + K A +V+D
Sbjct: 340 ILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMW-KWALKVKD 398
Query: 259 EMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLIL 311
+M G+ P T+ +LI VEQA L +EM++ G C P+ + + IL
Sbjct: 399 DMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASG-CEPNSQCFNIL 450
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMK-----RASDMSDSGLVRYAYSDN 55
ML+ G +PT+ Y AL+ + ++ A +L +MK + + S L++ +
Sbjct: 150 MLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDAS 209
Query: 56 SYNFV--MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEID 113
++ V +YKE E + P+T+ + ++ G G G D+++
Sbjct: 210 QFDLVDSLYKEMD--------------ERLITPNTVTQNIVLS-----GYGRVGRFDQME 250
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM 173
K ++ D ++S +P + T +++ +G+ E ++ + G++ + T+N L+
Sbjct: 251 KVLS--DMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILI 308
Query: 174 SGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKL---FDKMKTSGIK 230
Y K + D + + M + TYN ++ +A+ + FD+M++ G+K
Sbjct: 309 GSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMK 368
Query: 231 PDHLSYNLLIAGYSYRGGYVK 251
D ++ LI GY+ G + K
Sbjct: 369 ADTKTFCCLINGYANAGLFHK 389
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 107 GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQE-KGLKLD 165
G + ++A DEM+ G+EPT+ YT L+ A A ++ +M+ + D
Sbjct: 135 GKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPD 194
Query: 166 VYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK----LF 221
V+TY+TL+ D +Y EM E+ I PN +T N ++ G+ R + L
Sbjct: 195 VFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLS 254
Query: 222 DKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKN-GIDPTFTTYDALI 276
D + ++ KPD + N++++ + G + E +N GI+P T++ LI
Sbjct: 255 DMLVSTACKPDVWTMNIILSVFGNMGKI--DMMESWYEKFRNFGIEPETRTFNILI 308
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 5/196 (2%)
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
+P TY L+ L + G+ A+ + EM E+GL+ V Y L++ Y + ID
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 188 IYDEMVE-KRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGY 243
I D+M + QP++ TY+T++ S+ L+ +M I P+ ++ N++++GY
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGY 240
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
G + + + D ++ P T + ++ +++ E ++ + GI P
Sbjct: 241 GRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGI-EP 299
Query: 304 DDKKYLILTDMVHRER 319
+ + + IL ++R
Sbjct: 300 ETRTFNILIGSYGKKR 315
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 27/242 (11%)
Query: 90 IYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSW- 148
+Y+ +I CC + + D +K + D +P + TYTLL+ +L +
Sbjct: 145 LYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDS------KPDLETYTLLLSSLLKRFNKLN 198
Query: 149 -------GAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNL 201
+ K+M+ G+ D + N ++ YAKC +D I ++ EM +PN
Sbjct: 199 VCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNA 258
Query: 202 LTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRD 258
TY+ ++ G C R + + +M+ G+ P+ Y +LI S + EA V
Sbjct: 259 YTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERR-LDEAVEVVY 317
Query: 259 EMLKNGIDPTFTTYDALIL----GLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDM 314
+ML N + P TY+ ++ G R + +E EE K G ++ Y L D
Sbjct: 318 DMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMG-----ERNYRTLMDE 372
Query: 315 VH 316
V+
Sbjct: 373 VY 374
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 11/147 (7%)
Query: 82 SGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEAL 141
+G++P T + + +I E+D+A+ EM G EP TY+ L++ +
Sbjct: 217 NGVIPDTFVLNMIIK--------AYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGV 268
Query: 142 FEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNL 201
E GR KEMQ KG+ + Y L+ + + +D + + +M+ + P++
Sbjct: 269 CEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDM 328
Query: 202 LTYNTMMLGHC---RCSEAQKLFDKMK 225
LTYNT++ C R SEA ++ ++ K
Sbjct: 329 LTYNTVLTELCRGGRGSEALEMVEEWK 355
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 128/315 (40%), Gaps = 48/315 (15%)
Query: 1 MLKVGFDPTITTYKALV-------LGCCTHH------------EVEQAKELLKEMKRASD 41
ML+ G+ P T +++ GCC H V LL R
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211
Query: 42 MSDSGLVRYAY---SDNSYNFVMY---KEGGLEEASDLLPEMLELESGLVPHTLIYDTLI 95
M D+ LV A +D S+N ++ + G E+A +L ML G P Y +L
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR--DGFRPSHFSYASLF 269
Query: 96 DECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIK 155
C + G +G AY MI G + L++ + G A +
Sbjct: 270 GACSSTGFLEQGKWVH-----AY---MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321
Query: 156 EMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS 215
+ ++ DV ++N+L++ YA+ + + ++EM I+PN +++ +++ C S
Sbjct: 322 RLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTA-CSHS 376
Query: 216 ----EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTT 271
E ++ MK GI P+ Y + + R G + A R +EM I+PT
Sbjct: 377 GLLDEGWHYYELMKKDGIVPEAWHY-VTVVDLLGRAGDLNRALRFIEEM---PIEPTAAI 432
Query: 272 YDALILGLRINHEVE 286
+ AL+ R++ E
Sbjct: 433 WKALLNACRMHKNTE 447
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 133/318 (41%), Gaps = 50/318 (15%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSD------------------SGLVRYA 51
+ + A++ G H+ + +L M + + SD G +A
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 52 YSDNS-YNFVMYKEGGL----EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTK 106
Y+ S Y+ ++ G+ + D+ +S VP + + T+I C G
Sbjct: 542 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG---- 597
Query: 107 GSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKL-- 164
E ++A +M G+ P T I L + A + +++ LKL
Sbjct: 598 ----EEERAFHVFSQMRLMGVLPDEFT----IATLAKASSCLTALEQGRQIHANALKLNC 649
Query: 165 --DVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQP-NLLTYNTMMLG---HCRCSEAQ 218
D + +L+ YAKC ID ++ KRI+ N+ +N M++G H E
Sbjct: 650 TNDPFVGTSLVDMYAKCGSIDDAYCLF-----KRIEMMNITAWNAMLVGLAQHGEGKETL 704
Query: 219 KLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKN-GIDPTFTTYDALIL 277
+LF +MK+ GIKPD +++ +++ S+ G V EA++ M + GI P Y L
Sbjct: 705 QLFKQMKSLGIKPDKVTFIGVLSACSH-SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLAD 763
Query: 278 GLRINHEVEQAEELLKEM 295
L V+QAE L++ M
Sbjct: 764 ALGRAGLVKQAENLIESM 781
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 112 IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
ID+A DEM R V++ +I GR A DM +EMQEK +K D +T +
Sbjct: 208 IDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 172 LMSGYAKCKYIDAH---IGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSG 228
L++ C Y+ A I++ +V R + N + ++ +C+C ++ + + +
Sbjct: 264 LLNA---CAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP 320
Query: 229 IKPDHLS-YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQ 287
K LS +N +I G + G+ + A + E+ ++G++P ++ ++ + EV +
Sbjct: 321 KK--QLSCWNSMILGLA-NNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHR 377
Query: 288 AEELLKEMVSKGICTPDDKKYLILTDMV 315
A+E + M K + P K Y ++ +++
Sbjct: 378 ADEFFRLMKEKYMIEPSIKHYTLMVNVL 405
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 87 HTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGR 146
+ +++T+I +G ++ S E+ ++ S ++P +TY + +A +G+
Sbjct: 88 NPFVWNTII-----RGF-SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQ 141
Query: 147 SWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNT 206
+ + + ++GL+ D + NT++ Y C + I+ M I +++ +N+
Sbjct: 142 ARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNS 197
Query: 207 MMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKN 263
M++G +C +AQ LFD+M + + +S+N +I+G+ R G K+A + EM +
Sbjct: 198 MIMGFAKCGLIDQAQNLFDEMP----QRNGVSWNSMISGF-VRNGRFKDALDMFREMQEK 252
Query: 264 GIDPTFTTYDALI 276
+ P T +L+
Sbjct: 253 DVKPDGFTMVSLL 265
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 140/336 (41%), Gaps = 65/336 (19%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKR---ASDMSDSGLVRYAYSDNSY 57
M+++G P + TY +L+ G V++A +L +++ A D+ L+ + Y+
Sbjct: 273 MIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYT---- 328
Query: 58 NFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA 117
+ G EEA + + + + LVP + +++ C G D + +
Sbjct: 329 -----RLGRFEEARKVFTSLEKRK--LVPDQYTFASILSSLCLSG-----KFDLVPR--- 373
Query: 118 YKDEMISRGI--EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSG 175
I+ GI + +VT LL ++G + A ++ M K LD YTY +S
Sbjct: 374 -----ITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSA 428
Query: 176 YAKC-----------------KYIDAHI--GIYDEMVEKRIQPNLLTYNTMMLGHCRCSE 216
+ K++DAH I D ++E L YNT
Sbjct: 429 LCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIE------LGKYNT---------- 472
Query: 217 AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
A LF + D +SY + I G R ++EA+ + +M + GI P TY +I
Sbjct: 473 AVHLFKRCILEKYPLDVVSYTVAIKGL-VRAKRIEEAYSLCCDMKEGGIYPNRRTYRTII 531
Query: 277 LGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILT 312
GL E E+ ++L+E + +G+ + K+ + +
Sbjct: 532 SGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYS 567
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 9/192 (4%)
Query: 91 YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGA 150
+D + C++G G D + + K MI G P + ++ G A
Sbjct: 177 FDIALSHFCSRG----GRGDLVGVKIVLK-RMIGEGFYPNRERFGQILRLCCRTGCVSEA 231
Query: 151 EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG 210
++ M G+ + V ++ L+SG+ + + ++++M++ PNL+TY +++ G
Sbjct: 232 FQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKG 291
Query: 211 HC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
EA + K+++ G+ PD + NL+I Y+ R G +EA +V + K + P
Sbjct: 292 FVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYT-RLGRFEEARKVFTSLEKRKLVP 350
Query: 268 TFTTYDALILGL 279
T+ +++ L
Sbjct: 351 DQYTFASILSSL 362
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVG 145
P+ ++++ +I G G E A+ EMI++ + P ++ T I A +VG
Sbjct: 286 PNLILWNAMI-----SGYAKNGYARE---AIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 146 RSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYN 205
A M + + + DV+ + L+ +AKC ++ ++D +++ +++ ++
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR----DVVVWS 393
Query: 206 TMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK 262
M++G H R EA L+ M+ G+ P+ +++ L+ ++ G V+E + + M
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH-SGMVREGWWFFNRMAD 452
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEM-VSKGI 300
+ I+P Y +I L ++QA E++K M V G+
Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV 491
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
E TIV++T ++ A + G A ++ +M++ +K D ++++ + + +
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 188 IYDEMVEK--RIQPNLL-TYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
I+ +V+ I+P+LL + NTM + + A+ LFDKMK+ P+ + +N +I+GY+
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYA 299
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
+ GY +EA + EM+ + P + + I +EQA +
Sbjct: 300 -KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 18/232 (7%)
Query: 81 ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEA 140
E + T+ Y+ +I + KG L+ D + EM G+ P ++TYT +I
Sbjct: 158 EFNVCADTVAYNLVI-----RLFADKGDLNIADMLI---KEMDCVGLYPDVITYTSMING 209
Query: 141 LFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKR---- 196
G+ A + KEM + L+ TY+ ++ G K ++ + + EM EK
Sbjct: 210 YCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEM-EKEDGGG 268
Query: 197 -IQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKE 252
I PN +TY ++ C R EA + D+M G P+ ++ +LI G VK
Sbjct: 269 LISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKA 328
Query: 253 AFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
++ D+++K G + + + L E+AE++ + M+ +G+ PD
Sbjct: 329 LSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGV-RPD 379
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 54/301 (17%)
Query: 4 VGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYK 63
VG P + TY +++ G C +++ A L KEM + D L YS K
Sbjct: 194 VGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSK----HDCVLNSVTYSRILEGVC--K 247
Query: 64 EGGLEEASDLLPEMLELESG--LVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDE 121
G +E A +LL EM + + G + P+ + Y +I C K +++A+ D
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEK--------RRVEEALLVLDR 299
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDM--IKEMQEKGLKLDVYTYNTLMSGYAKC 179
M +RG P VT +LI+ + E ED+ + ++ +K +KL + + S
Sbjct: 300 MGNRGCMPNRVTACVLIQGVLE-----NDEDVKALSKLIDKLVKLGGVSLSECFS----- 349
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLL 239
+ ++ R EA+K+F M G++PD L+ + +
Sbjct: 350 -----------------------SATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHV 386
Query: 240 IAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTT--YDALILGLRINHEVEQAEELLKEMVS 297
Y+ + F + E+ K + T + + L+LGL +A +L K M+
Sbjct: 387 FRELCLLERYL-DCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLD 445
Query: 298 K 298
K
Sbjct: 446 K 446
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
AV EM I P VT ++ A+ +G E + ++ G+++D + L+
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKP 231
Y+KC I+ I ++ E+ + N++T++ M+ G H + +A F KM+ +G++P
Sbjct: 318 MYSKCGIIEKAIHVF----ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK-NGIDPTFTTYDALILGLRINHEVEQAEE 290
++Y L+ S+ GG V+E R +M+ +G++P Y ++ L + +++AEE
Sbjct: 374 SDVAYINLLTACSH-GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 291 LLKEMVSKGICTPDD 305
+ M K PDD
Sbjct: 433 FILNMPIK----PDD 443
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 18/192 (9%)
Query: 131 IVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD 190
IV + ++I+ +G A + +M+++ V ++NT++SGY+ + + ++
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRS----VVSWNTMISGYSLNGFFKDAVEVFR 263
Query: 191 EMVEKRIQPNLLTYNTMM-----LGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSY 245
EM + I+PN +T +++ LG E L+ + SGI+ D + + LI YS
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLY--AEDSGIRIDDVLGSALIDMYS- 320
Query: 246 RGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDD 305
+ G +++A V + + + + T+ A+I G I+ + A + +M G+ P D
Sbjct: 321 KCGIIEKAIHVFERLPRENV----ITWSAMINGFAIHGQAGDAIDCFCKMRQAGV-RPSD 375
Query: 306 KKYL-ILTDMVH 316
Y+ +LT H
Sbjct: 376 VAYINLLTACSH 387
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEM 192
TY L+ G + A ++ + M++ LD TY ++ AK +DA ++ +M
Sbjct: 280 TYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM 339
Query: 193 VEKRIQPNLLTYNTMM--LGHC-RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGY 249
E++++P+ +++++ +G R + K++ +M+ G +P + LI Y+ + G
Sbjct: 340 KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYA-KAGK 398
Query: 250 VKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYL 309
+ A R+ DEM K+G P F Y +I + ++E A + K+M G P Y
Sbjct: 399 LDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFL-PTPSTYS 457
Query: 310 ILTDM 314
L +M
Sbjct: 458 CLLEM 462
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 26/246 (10%)
Query: 11 TTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEA 70
+TY+ ++ ++ A +L ++MK + S V + D+ M K G L+ +
Sbjct: 314 STYELIIPSLAKSGRLDAAFKLFQQMKE-RKLRPSFSVFSSLVDS-----MGKAGRLDTS 367
Query: 71 SDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPT 130
+ EM G P ++ +LID G ++D A+ DEM G P
Sbjct: 368 MKVYMEMQGF--GHRPSATMFVSLIDSYAKAG--------KLDTALRLWDEMKKSGFRPN 417
Query: 131 IVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD 190
YT++IE+ + G+ A + K+M++ G TY+ L+ +A +D+ + IY+
Sbjct: 418 FGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYN 477
Query: 191 EMVEKRIQPNLLTYNTM--MLGHCRCSE-AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRG 247
M ++P L +Y ++ +L + R + A K+ +MK G D + ++L+
Sbjct: 478 SMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI------ 531
Query: 248 GYVKEA 253
Y+K+A
Sbjct: 532 -YIKDA 536
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 129/314 (41%), Gaps = 33/314 (10%)
Query: 8 PTITTYKALVLGCCTHHEVEQAKELLKE-MKRASDMSDSGLVRYAYSDNSYNFVMYKEGG 66
P I Y A++ G ++ E E + L KE M + + S LV + G
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGY 344
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
L+S + H + L L+EI+ A DE
Sbjct: 345 C------------LKSNFLSHASVSTALTT--------VYSKLNEIESARKLFDE----S 380
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
E ++ ++ +I + G + A + +EMQ+ + T ++S A+ +
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
++D + + ++ ++ + +C +EA++LFD M K + +++N +I+GY
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT----KKNEVTWNTMISGY 496
Query: 244 SYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTP 303
G +EA + EML +GI PT T+ ++ V++ +E+ M+ + P
Sbjct: 497 GLHG-QGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEP 555
Query: 304 DDKKYLILTDMVHR 317
K Y + D++ R
Sbjct: 556 SVKHYACMVDILGR 569
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 149 GAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMM 208
A + M+E G+ V Y TL+ GY +D ++ EM K PN+ TYN+M+
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 209 LGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNG 264
G C EA L +M++ G P+ + Y+ L+ GY + G + EA +V EM+K G
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV-GYLRKAGKLSEARKVIKEMVKKG 824
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLI 240
A + + M E I P++L Y T++ G+ E A+++F +M G P+ +YN +I
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
G G + +EA + EM G +P F Y L+ LR ++ +A +++KEMV KG
Sbjct: 767 RGLCMAGEF-REACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A+ + M GI+P+++ YT LI+ G A++M +EM KG +V+TYN+++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR----CSEAQKLFDKMKTSG 228
G + EM + PN + Y+T++ G+ R SEA+K+ +M G
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV-GYLRKAGKLSEARKVIKEMVKKG 824
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Query: 81 ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEA 140
E G+ P L Y TLID G E+DKA EM +G P + TY +I
Sbjct: 717 EVGIDPSVLHYTTLIDGYVVSG--------ELDKAKEMFREMTVKGQLPNVFTYNSMIRG 768
Query: 141 LFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEK 195
L G A ++KEM+ +G + Y+TL+ K + + EMV+K
Sbjct: 769 LCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 15/221 (6%)
Query: 101 KGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEK 160
KG KG EI K V E+ E +T+T +I A G A +M +K
Sbjct: 380 KGFSGKG---EISKCV----ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQK 432
Query: 161 GLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEA 217
+ + YT+++++S A + + I+ +V+ I +L N+++ +C+C ++A
Sbjct: 433 EVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDA 492
Query: 218 QKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALIL 277
K+F + +P+ +SYN +I+GYSY G+ K+A ++ + +G +P T+ AL+
Sbjct: 493 YKIFSCIS----EPNIVSYNTMISGYSYN-GFGKKALKLFSMLESSGKEPNGVTFLALLS 547
Query: 278 GLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
V+ + K M S P Y + D++ R
Sbjct: 548 ACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRS 588
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 131/304 (43%), Gaps = 29/304 (9%)
Query: 33 LKEMKRASDM-SDSGLVRYAYSDNSYNFV---------MYKEGGLEEASDLLPEMLELES 82
++ + RASD+ + S L R + N+ V MY+ E+ L + +S
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLF-QYFFKQS 210
Query: 83 GLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAV-AYKDEMISRGIEPTIVTYTLLIEAL 141
+VP+ + Y+ +I+ C +G +D+A+ Y+ + + P+ VTY L + L
Sbjct: 211 NIVPNVVSYNQIINAHCDEG--------NVDEALEVYRHILANAPFAPSSVTYRHLTKGL 262
Query: 142 FEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNL 201
+ GR A +++EM KG D YN L+ GY D + +DE+ K +
Sbjct: 263 VQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDG 322
Query: 202 LTYNTMM---LGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRD 258
+ T M EA + + + + + N+L+ + + G EA+ + +
Sbjct: 323 IVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVF-LKFGKKDEAWALFN 381
Query: 259 EMLKNGIDPTFTTYDALILGLRINH-----EVEQAEELLKEMVSKGICTPDDKKYLILTD 313
EML N P + ++ +G+ +N E +A K++ SK P YL +
Sbjct: 382 EMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCN 441
Query: 314 MVHR 317
+V R
Sbjct: 442 IVTR 445
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 21/280 (7%)
Query: 1 MLKVGFDPTITTYKALVLGCC-THHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNF 59
M + G P + TY L+ GC + +A EL+ E+ DS + + + N
Sbjct: 192 MKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASN- 250
Query: 60 VMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYK 119
G EEA + + +M ++E G P+ Y +L++ KG + KA
Sbjct: 251 -----GRSEEAENFIQQM-KVE-GHSPNIYHYSSLLNSYSWKG--------DYKKADELM 295
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
EM S G+ P V T L++ + G + +++ E++ G + Y LM G +K
Sbjct: 296 TEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKA 355
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSY 236
++ I+D+M K ++ + + M+ CR EA++L +T+ K D +
Sbjct: 356 GKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVML 415
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI 276
N ++ Y R G ++ R+ +M + + P + T+ LI
Sbjct: 416 NTMLCAYC-RAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 12/220 (5%)
Query: 99 CTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQ 158
C K +G K + KA+ + + + ++ L + G+ + +M+
Sbjct: 138 CIKFVGAKN----VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMK 193
Query: 159 EKGLKLDVYTYNTLMSGYAKCK--YIDAHIGIYDEMVEKRIQPNLLTYNTMM---LGHCR 213
GLK DV TYNTL++G K K Y A I + E+ IQ + + Y T++ + R
Sbjct: 194 RDGLKPDVVTYNTLLAGCIKVKNGYPKA-IELIGELPHNGIQMDSVMYGTVLAICASNGR 252
Query: 214 CSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYD 273
EA+ +MK G P+ Y+ L+ YS++G Y K+A + EM G+ P
Sbjct: 253 SEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY-KKADELMTEMKSIGLVPNKVMMT 311
Query: 274 ALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTD 313
L+ +++ ELL E+ S G ++ Y +L D
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGY-AENEMPYCMLMD 350
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 112/241 (46%), Gaps = 20/241 (8%)
Query: 80 LESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIE 139
+ G +PH ++ LID G ++ A D M E ++++ +I
Sbjct: 357 MRRGFLPHMVLETALID--------MYGECGQLKSAEVIFDRMA----EKNVISWNSIIA 404
Query: 140 ALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQP 199
A + G+++ A ++ +E+ + L D T +++ YA+ + I+ +V+ R
Sbjct: 405 AYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS 464
Query: 200 NLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRV 256
N + N+++ + C +A+K F+ + + D +S+N +I Y+ G+ + + +
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHI----LLKDVVSWNSIIMAYAVH-GFGRISVWL 519
Query: 257 RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVH 316
EM+ + ++P +T+ +L+ I+ V++ E + M + P + Y + D++
Sbjct: 520 FSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIG 579
Query: 317 R 317
R
Sbjct: 580 R 580
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 129/307 (42%), Gaps = 32/307 (10%)
Query: 7 DPTITTYKALVLGCCTHHEVE-QAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEG 65
+P+ + ++ C H +K EM+R S D + + + K G
Sbjct: 76 NPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAK----KNG 131
Query: 66 GLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISR 125
L L + L GL+ +TLI + ID A+ DE R
Sbjct: 132 DLTLVKTLHCQALRF--GLLSDLFTLNTLIR--------VYSLIAPIDSALQLFDENPQR 181
Query: 126 GIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH 185
+ VTY +LI+ L + A ++ M + D+ ++N+L+SGYA+ +
Sbjct: 182 DV----VTYNVLIDGLVKAREIVRARELFDSMPLR----DLVSWNSLISGYAQMNHCREA 233
Query: 186 IGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAG 242
I ++DEMV ++P+ + + + + + QK + D K + D L+
Sbjct: 234 IKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDF 293
Query: 243 YSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICT 302
Y+ + G++ A E+ + D T T++A+I GL ++ E + ++MVS GI
Sbjct: 294 YA-KCGFIDTAM----EIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGI-K 347
Query: 303 PDDKKYL 309
PD ++
Sbjct: 348 PDGVTFI 354
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 103 IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKE-MQEKG 161
I ++ +A+ DEM++ G++P V + A + G W I + + K
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSG-DWQKGKAIHDYTKRKR 279
Query: 162 LKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQ 218
L +D + L+ YAKC +ID + I++ +K L T+N M+ G H
Sbjct: 280 LFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDK----TLFTWNAMITGLAMHGNGELTV 335
Query: 219 KLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEM 260
F KM +SGIKPD +++ ++ G S+ G V EA + D+M
Sbjct: 336 DYFRKMVSSGIKPDGVTFISVLVGCSH-SGLVDEARNLFDQM 376
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 133/315 (42%), Gaps = 42/315 (13%)
Query: 10 ITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVR-YAYSDNSYNFVMYKEGGLE 68
+ TY L+ G E+ +A+EL M +S + L+ YA ++
Sbjct: 183 VVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHC-----------R 231
Query: 69 EASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSL--DEIDKAVAYKDEMISRG 126
EA L EM+ L GL P + + + C G KG D + + D ++ G
Sbjct: 232 EAIKLFDEMVAL--GLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATG 289
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
L + G D E+ E ++T+N +++G A + +
Sbjct: 290 --------------LVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTV 335
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLGHCRCS------EAQKLFDKMKTSGIKPDHLSYNLLI 240
+ +MV I+P+ +T+ ++++G CS EA+ LFD+M++ + + +
Sbjct: 336 DYFRKMVSSGIKPDGVTFISVLVG---CSHSGLVDEARNLFDQMRSLYDVNREMKHYGCM 392
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNGID-PTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
A R G ++EA + ++M K+G + + L+ G RI+ +E AE+ + K
Sbjct: 393 ADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRV--KA 450
Query: 300 ICTPDDKKYLILTDM 314
+ D Y ++ +M
Sbjct: 451 LSPEDGGVYKVMVEM 465
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 87/156 (55%), Gaps = 25/156 (16%)
Query: 150 AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMML 209
A D+ ++++ + + T+NT++SGY K + ++ ++D M ++ +++T+NTM+
Sbjct: 59 ARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDVMPKR----DVVTWNTMIS 110
Query: 210 GHCRCS------EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEML-K 262
G+ C EA+KLFD+M + D S+N +I+GY+ + + EA + ++M +
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYA-KNRRIGEALLLFEKMPER 165
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSK 298
N + ++ A+I G N EV+ A L ++M K
Sbjct: 166 NAV-----SWSAMITGFCQNGEVDSAVVLFRKMPVK 196
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 87/169 (51%), Gaps = 10/169 (5%)
Query: 150 AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGI-YDEMVEKRIQPNLLTYNTMM 208
A D+ M +G K D +T +L+S A ++ +G+ ++V K + P++ +N ++
Sbjct: 393 AVDLFIRMNIEGEKPDPHTLTSLLS--ASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALI 450
Query: 209 LGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGI 265
+ RC E ++++FD+MK +K + +++N +I GY++ G EA + M NGI
Sbjct: 451 TMYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFHGN-ASEALNLFGSMKSNGI 506
Query: 266 DPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDM 314
P+ T+ +++ V++A+ M+S P + Y L ++
Sbjct: 507 YPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNV 555
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 115/238 (48%), Gaps = 21/238 (8%)
Query: 11 TTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGGLEEA 70
+T+ L+ C EV+ A EL++ M + S + D L YS + +K+ +
Sbjct: 180 STFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRL----YSRLLSSVCKHKDSSCFDV 235
Query: 71 SDLLPEM--LELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIE 128
L ++ GL +T++ L++ G +G + V+ ++M +E
Sbjct: 236 IGYLEDLRKTRFSPGLRDYTVVMRFLVE-------GGRGK-----EVVSVLNQMKCDRVE 283
Query: 129 PTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGI 188
P +V YT++++ + A+ + E+ GL DVYTYN ++G K I+ + +
Sbjct: 284 PDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKM 343
Query: 189 YDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSGIKPDHLSYNLLIAGY 243
M + +PN++TYN ++ + S A+ L+ +M+T+G+ + +++++I+ Y
Sbjct: 344 MSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 45/210 (21%)
Query: 133 TYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAH----IGI 188
T+ +LI+AL +G A ++++ M + + +D Y+ L+S CK+ D+ IG
Sbjct: 181 TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSV--CKHKDSSCFDVIGY 238
Query: 189 YDEMVEKRIQPNLLTYNTMM---------------LGHCRC------------------- 214
+++ + R P L Y +M L +C
Sbjct: 239 LEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIA 298
Query: 215 ----SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFT 270
+A KLFD++ G+ PD +YN+ I G + ++ A ++ M K G +P
Sbjct: 299 DEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQND-IEGALKMMSSMNKLGSEPNVV 357
Query: 271 TYDALILGLRINHEVEQAEELLKEMVSKGI 300
TY+ LI L ++ +A+ L KEM + G+
Sbjct: 358 TYNILIKALVKAGDLSRAKTLWKEMETNGV 387
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 4/189 (2%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
+ Y +++ P + YT+++ L E GR ++ +M+ ++ D+ Y ++
Sbjct: 235 VIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQ 294
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKP 231
G + ++DE++ + P++ TYN + G C+ ++ A K+ M G +P
Sbjct: 295 GVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEP 354
Query: 232 DHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEEL 291
+ ++YN+LI + G + A + EM NG++ T+D +I EV A L
Sbjct: 355 NVVTYNILIKAL-VKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGL 413
Query: 292 LKEMVSKGI 300
L+E + +
Sbjct: 414 LEEAFNMNV 422
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVG 145
P Y+ I+ C + ++I+ A+ M G EP +VTY +LI+AL + G
Sbjct: 319 PDVYTYNVYINGLCKQ--------NDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAG 370
Query: 146 RSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDE 191
A+ + KEM+ G+ + +T++ ++S Y + + G+ +E
Sbjct: 371 DLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 104/214 (48%), Gaps = 12/214 (5%)
Query: 109 LDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYT 168
L + +A + ++I+ P +V+Y +I AL + G+ A ++ + M + DV
Sbjct: 260 LGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKI 319
Query: 169 YNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFD-----K 223
N ++ K I + ++ E+ EK PN++TYN+++ C+ +K+++ +
Sbjct: 320 CNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379
Query: 224 MKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALI-LGLRIN 282
+K P+ ++++ L+ YS R K+ V + M KN + T Y+ + L ++ +
Sbjct: 380 LKGGSCSPNDVTFSYLLK-YSQRS---KDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWD 435
Query: 283 HEVEQAEELLKEMVSKGICTPDDKKYLILTDMVH 316
E E+ E+ EM G+ PD + Y I +H
Sbjct: 436 KE-EKVREIWSEMERSGL-GPDQRTYTIRIHGLH 467
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 81 ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEA 140
E GL+P+ + ++D C G+ + +A+ M +G P +V YT ++EA
Sbjct: 127 EGGLIPNAV---AMLDGLCKDGL--------VQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 141 LFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPN 200
+ + A+ + ++MQ G+ + ++Y L+ G C +D + EM+E PN
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 201 LLTYNTMMLGHCRCS---EAQKLFDKMKTSGI 229
+ T+ ++ CR +AQ D + G
Sbjct: 236 VPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 150 AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMML 209
++++ K+M+E GL + ++ G K + + ++ M +K P ++ Y ++
Sbjct: 118 SDEIFKKMKEGGL---IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 210 GHCRC---SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID 266
C+ +A+++F KM+ +GI P+ SY +L+ G Y + +A EML++G
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL-YNCNMLDDAVAFCSEMLESGHS 233
Query: 267 PTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
P T+ L+ L VEQA+ + + KG
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 81 ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEA 140
E GL+P+ + ++D C G+ + +A+ M +G P +V YT ++EA
Sbjct: 127 EGGLIPNAV---AMLDGLCKDGL--------VQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 141 LFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPN 200
+ + A+ + ++MQ G+ + ++Y L+ G C +D + EM+E PN
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 201 LLTYNTMMLGHCRCS---EAQKLFDKMKTSGI 229
+ T+ ++ CR +AQ D + G
Sbjct: 236 VPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 150 AEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMML 209
++++ K+M+E GL + ++ G K + + ++ M +K P ++ Y ++
Sbjct: 118 SDEIFKKMKEGGL---IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 210 GHCRC---SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGID 266
C+ +A+++F KM+ +GI P+ SY +L+ G Y + +A EML++G
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL-YNCNMLDDAVAFCSEMLESGHS 233
Query: 267 PTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
P T+ L+ L VEQA+ + + KG
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
Query: 163 KLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQK 219
+L++ +L+ Y KC +D + I+ +M EKR N LTY+ M+ G H A +
Sbjct: 266 ELNIIVQTSLVDMYVKCGCLDKALHIFQKM-EKR---NNLTYSAMISGLALHGEGESALR 321
Query: 220 LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNG-IDPTFTTYDALI 276
+F KM G++PDH+ Y ++ S+ G VKE RV EMLK G ++PT Y L+
Sbjct: 322 MFSKMIKEGLEPDHVVYVSVLNACSH-SGLVKEGRRVFAEMLKEGKVEPTAEHYGCLV 378
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 54/249 (21%)
Query: 87 HTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGR 146
+ I++TLI +G G + I Y++ +S +EP TY LI+A+ +
Sbjct: 84 NVFIWNTLI-----RGYAEIG--NSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMAD 136
Query: 147 SWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNT 206
E + + G +Y N+L+ YA C + + ++D+M EK +L+ +N+
Sbjct: 137 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK----DLVAWNS 192
Query: 207 MMLGHC---RCSEAQKLFDKMKTSGIKPDHL----------------------------- 234
++ G + EA L+ +M + GIKPD
Sbjct: 193 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 252
Query: 235 ------SYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQA 288
S N+L+ Y+ R G V+EA + DEM +D ++ +LI+GL +N ++A
Sbjct: 253 LTRNLHSSNVLLDLYA-RCGRVEEAKTLFDEM----VDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 289 EELLKEMVS 297
EL K M S
Sbjct: 308 IELFKYMES 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 137/297 (46%), Gaps = 36/297 (12%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKEGG 66
+P TY L+ T +V + + + R SG Y NS + G
Sbjct: 118 EPDTHTYPFLIKAVTTMADVRLGETIHSVVIR------SGFGSLIYVQNSLLHLYANCGD 171
Query: 67 LEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRG 126
+ A + +M E + + ++++I+ G G +E A+A EM S+G
Sbjct: 172 VASAYKVFDKMPEKD------LVAWNSVIN-----GFAENGKPEE---ALALYTEMNSKG 217
Query: 127 IEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHI 186
I+P T L+ A ++G + + M + GL ++++ N L+ YA+C ++
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 187 GIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMK-TSGIKPDHLSYNLLIAG 242
++DEMV+K N +++ ++++G + EA +LF M+ T G+ P +++ ++
Sbjct: 278 TLFDEMVDK----NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 243 YSYRGGYVKEAF----RVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
S+ G VKE F R+R+E I+P + ++ L +V++A E +K M
Sbjct: 334 CSH-CGMVKEGFEYFRRMREEY---KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 71/337 (21%)
Query: 5 GF--DPTITTYKALVLGCCTHHEVEQAKELLKEMK-RASDMSDSGLV------------- 48
GF DP + +Y L++GC + + + +L +E+K + D G+V
Sbjct: 231 GFVVDPVVYSY--LMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEM 288
Query: 49 --------RYAYSDNS--------YNFV---MYKEGGLEEASDLLPEMLELESGLVPHTL 89
A +NS YN+V + + G +EA L + ++ E H
Sbjct: 289 EKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLF-DAVKKEHNPPRHLA 347
Query: 90 I----YDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVG 145
+ ++ +++ C G + ++A+ +M P +++ L+ L +
Sbjct: 348 VNLGTFNVMVNGYCAGG--------KFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNE 399
Query: 146 RSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYN 205
AE + EM+EK +K D YTY LM K ID Y MVE ++PNL YN
Sbjct: 400 LLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYN 459
Query: 206 TM---MLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLK 262
+ ++ + +A+ FD M S +K D +Y ++ S G + E ++ DEML
Sbjct: 460 RLQDQLIKAGKLDDAKSFFD-MMVSKLKMDDEAYKFIMRALS-EAGRLDEMLKIVDEMLD 517
Query: 263 NGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKG 299
+ +R++ E+ +E +KE + KG
Sbjct: 518 DDT-------------VRVSEEL---QEFVKEELRKG 538
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 119/288 (41%), Gaps = 62/288 (21%)
Query: 81 ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVA---YKDEMISRGIEPTIVTYTLL 137
++G+ P+ + Y+ + + LD +A YK + + + P+I T+ +L
Sbjct: 158 QAGIAPNIITYNLIF----------QAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRIL 207
Query: 138 IEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEK-- 195
++ L A ++ ++M KG +D Y+ LM G K D + +Y E+ EK
Sbjct: 208 VKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLG 267
Query: 196 -------------------------------------RIQPNLLTYNTMMLG---HCRCS 215
+++ + + YN ++ + +
Sbjct: 268 GFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFD 327
Query: 216 EAQKLFDKMKTSGIKPDHLS-----YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFT 270
EA KLFD +K P HL+ +N+++ GY GG +EA V +M P
Sbjct: 328 EALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYC-AGGKFEEAMEVFRQMGDFKCSPDTL 386
Query: 271 TYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
+++ L+ L N + +AE+L EM K + PD+ Y +L D +E
Sbjct: 387 SFNNLMNQLCDNELLAEAEKLYGEMEEKNV-KPDEYTYGLLMDTCFKE 433
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQ---KLFDKMKTSGIKPDHLSYNLLIAGYS 244
++ ++ +K P+++ + ++ + +A+ K+F +M SG+ P+ +Y++LI G +
Sbjct: 219 LFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLA 278
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
G K+A + EM+ NG+ P TY A+ + E A ELL+EM KG PD
Sbjct: 279 ADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFV-PD 337
Query: 305 DK 306
+K
Sbjct: 338 EK 339
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 105/227 (46%), Gaps = 12/227 (5%)
Query: 52 YSDNSYNFVMYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDE 111
Y+ N+ + K G +++A +L +M+ P + +T++ +G + +LD
Sbjct: 448 YTLNTVINGLCKMGRVDDAMKVLDDMMT-GKFCAPDAVTLNTVMCGLLAQGRAEE-ALDV 505
Query: 112 IDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNT 171
+++ M I+P +V Y +I LF++ + A + ++++ + D TY
Sbjct: 506 LNRV------MPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAI 559
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRC---SEAQKLFDKMKTSG 228
++ G +D +D+++ + + Y + G C+ S+A + SG
Sbjct: 560 IIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSG 619
Query: 229 IKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDAL 275
P+ + YN +IA S R G +EA+++ +EM KNG P T+ L
Sbjct: 620 AIPNVVCYNTVIAECS-RSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 113 DKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTL 172
D+A+ D + RG P + + +I +L + GR A G D T N +
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 173 MSGYAKCKYIDAHIGIYDEMV--EKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTS 227
++ + + +G+ ++ +K P+L YN +M C R +A KL M+
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKE---AFRVRDEMLKNGIDPTFTTYDALILGLRINHE 284
G PD +++ LI GY ++E A +V DEM GI P T LI G +
Sbjct: 192 GHLPDVVTFTTLIGGYC----EIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRD 247
Query: 285 VEQAEELLKEM 295
VE +L+KE+
Sbjct: 248 VETGRKLMKEL 258
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 144/344 (41%), Gaps = 43/344 (12%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKE----------------MKRASDMSDSG-- 46
G P T+Y A++ G C +A +LL+E M+ D+G
Sbjct: 337 GLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKA 396
Query: 47 ------LVRYAYSDNSYNFVMYKEG--GLEEASDLLPEMLELESG-LVPHTLIYDTLIDE 97
++R +D + + +Y G ++ +++L ++ + G P +T+I+
Sbjct: 397 RNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVING 456
Query: 98 CCTKGIGTKGSLDEIDKAVAYKDEMIS-RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKE 156
C G +D A+ D+M++ + P VT ++ L GR+ A D++
Sbjct: 457 LCKMG--------RVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNR 508
Query: 157 -MQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHC--- 212
M E +K V YN ++ G K D + ++ ++ + + + TY ++ G C
Sbjct: 509 VMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTN 568
Query: 213 RCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTY 272
+ A+K +D + + D Y + G + GY+ +A ++ +G P Y
Sbjct: 569 KVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC-QSGYLSDACHFLYDLADSGAIPNVVCY 627
Query: 273 DALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVH 316
+ +I + +A ++L+EM G PD + IL D +H
Sbjct: 628 NTVIAECSRSGLKREAYQILEEMRKNGQ-APDAVTWRIL-DKLH 669
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 28/271 (10%)
Query: 46 GLVRYAYSDNSYNFV-----MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCT 100
GL Y +S N + G +EA +L L SG +P + +I
Sbjct: 80 GLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRF--LLFLASGFIPDERTCNVIIARLLY 137
Query: 101 KGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEK 160
+L I + + +K E + P++ Y L+ L + R A ++ +M+ +
Sbjct: 138 SR-SPVSTLGVIHRLIGFKKEFV-----PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 161 GLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQ-- 218
G DV T+ TL+ GY + + ++ ++DEM I+PN LT + ++ G + + +
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETG 251
Query: 219 -----KLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEM-LKNGIDPTFTTY 272
+L++ MK + + R GY + F + + M L ++ F Y
Sbjct: 252 RKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEF-AY 310
Query: 273 DALILGL---RINHEVEQAEELLKEMVSKGI 300
+I L R NH A ++ M SKG+
Sbjct: 311 GHMIDSLCRYRRNH---GAARIVYIMKSKGL 338
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 129/315 (40%), Gaps = 31/315 (9%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMK----RASDMSDSGLVRYAYSDNS 56
M G P + T+ L+ G C E+E A ++ EM+ R + ++ S L+
Sbjct: 188 MRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIG------- 240
Query: 57 YNFVMYKEGGLEEASDLLPEMLEL---ESGLVPHTLIYDTLIDECCTKGIGTKGSLDEID 113
F+ ++ +E L+ E+ E E+ + L+D C +G ++I
Sbjct: 241 -GFLKMRD--VETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGY-----FNDIF 292
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLM 173
+ S +E Y +I++L R+ GA ++ M+ KGLK +YN ++
Sbjct: 293 EIAENMSLCESVNVE---FAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAII 349
Query: 174 SGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCR---CSEAQKLFDKM-KTSGI 229
G K + +E E P+ TY +M C+ +A+ + + M + G
Sbjct: 350 HGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGA 409
Query: 230 KPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAE 289
+ YN+ + G E V ML+ P T + +I GL V+ A
Sbjct: 410 DRTRI-YNIYLRGLCVMDNPT-EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAM 467
Query: 290 ELLKEMVSKGICTPD 304
++L +M++ C PD
Sbjct: 468 KVLDDMMTGKFCAPD 482
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 19/162 (11%)
Query: 86 PHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVG 145
P+ +++ LI C + G E KA + +M+ I P +T+ LI+A E+
Sbjct: 80 PNLFVFNLLI-RCFSTG-------AEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEME 131
Query: 146 RSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYN 205
E ++ G + DVY N+L+ YA C +I A I+ +M + +++++
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR----DVVSWT 187
Query: 206 TMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
+M+ G+C+C A+++FD+M + +++++I GY+
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNL----FTWSIMINGYA 225
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 89/179 (49%), Gaps = 8/179 (4%)
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
RG+E V++ +I+ L + G + A + +EM+ +GLK+D Y + +++ I+
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIA 241
I+ ++ Q ++ + ++ +C+C A+ +FD+MK + +S+ ++
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV----VSWTAMVV 344
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
GY + G +EA ++ +M ++GIDP T I +E+ + + ++ G+
Sbjct: 345 GYG-QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL 402
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 125/317 (39%), Gaps = 28/317 (8%)
Query: 5 GFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYKE 64
G + ++ A++ G + ++A E +EMK GL Y S
Sbjct: 230 GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV------QGLKMDQYPFGSVLPACGGL 283
Query: 65 GGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMIS 124
G + E + + + H + LID C K + Y +
Sbjct: 284 GAINEGKQI--HACIIRTNFQDHIYVGSALIDMYCKC------------KCLHYAKTVFD 329
Query: 125 RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDA 184
R + +V++T ++ + GR+ A + +MQ G+ D YT +S A ++
Sbjct: 330 RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEE 389
Query: 185 HIGIYDEMVEKRIQPNLLTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIA 241
+ + + + + N+++ + +C ++ +LF++M D +S+ +++
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVS 445
Query: 242 GYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
Y+ G V E ++ D+M+++G+ P T +I VE+ + K M S+
Sbjct: 446 AYAQFGRAV-ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGI 504
Query: 302 TPDDKKYLILTDMVHRE 318
P Y + D+ R
Sbjct: 505 VPSIGHYSCMIDLFSRS 521
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 122 MISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKY 181
M+S+GI P V+ T ++ A+ + + G+ D + N L+ Y KC +
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 182 IDAHIGIYDEMVEKRIQ-PNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKPDHLSYN 237
Y E + K++Q +L+T+N M+ G H C A LFD+MK +G PD +++
Sbjct: 628 SK-----YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFL 682
Query: 238 LLIAGYSYRGGYVKEAFRVRDEMLKN-GIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
LI+ ++ G+V+E + + M ++ GI+P Y ++ L +E+A +K M
Sbjct: 683 SLISACNHS-GFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 27/244 (11%)
Query: 89 LIYDTLIDECCTK------GIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALF 142
L++D + C G KG +DE A+A MI G +P +VT LI
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDE---ALALFHAMIKSGEKPDLVTLLSLISGCG 368
Query: 143 EVGRSWGAEDMIKEMQEKGLKLD-VYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNL 201
+ G + + G K D V N L+ Y+KC I I+D EK +
Sbjct: 369 KFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTV---- 424
Query: 202 LTYNTMMLGHCRCS---EAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVK--EAFRV 256
+T+ TM+ G+ EA KLF KM KP+H+++ ++ ++ G K E F +
Sbjct: 425 VTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHI 484
Query: 257 RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDM-- 314
++ I P Y ++ L ++E+A EL++ M +K PD + L +
Sbjct: 485 MKQVYN--ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK----PDAGIWGALLNACK 538
Query: 315 VHRE 318
+HR
Sbjct: 539 IHRN 542
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 114 KAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLD--VYTYNT 171
+A+ Y D M GI VT I A ++G S A+ ++ Q+ G V +
Sbjct: 264 EALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSA 323
Query: 172 LMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKT-S 227
L+ Y+KC ++ + ++ M K N+ TY++M+LG H R EA LF M T +
Sbjct: 324 LIDMYSKCGNVEEAVNVFMSMNNK----NVFTYSSMILGLATHGRAQEALHLFHYMVTQT 379
Query: 228 GIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKN-GIDPTFTTYDALILGLRINHEVE 286
IKP+ +++ + S+ G V + +V D M + G+ PT Y ++ L ++
Sbjct: 380 EIKPNTVTFVGALMACSH-SGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQ 438
Query: 287 QAEELLKEM 295
+A EL+K M
Sbjct: 439 EALELIKTM 447
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 84 LVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFE 143
+ P I D LI C +++D+A EM G E Y ++++ + +
Sbjct: 241 IFPDENICDLLISGWCI--------AEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCK 292
Query: 144 VGRSWGA-------EDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKR 196
+ R E ++ EM+ +G+ + T+N L++ K + + + ++ M E
Sbjct: 293 LCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWG 352
Query: 197 IQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGI-----KPDHLSYNLLIAGYSYRGG 248
QP+ TY ++ R E ++ DKMK++G K ++ + ++ G
Sbjct: 353 CQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIER--- 409
Query: 249 YVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGIC 301
++ A V M NG P TYD L+ + N+++ +A L KE KGI
Sbjct: 410 -LEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIA 461
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 5/176 (2%)
Query: 124 SRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYID 183
S G + Y + +L VGR AE++ K M+ G + D TY+ L+ G K K ++
Sbjct: 363 STGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLE 422
Query: 184 AHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKL---FDKMKTSGIKPDHLSYNLLI 240
G+ D+M + P++ T+ ++ GHC+ +E K F M G D ++LI
Sbjct: 423 EARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLI 482
Query: 241 AGYSYRGGYVKEAFRVRDEMLKNG-IDPTFTTYDALILGLRINHEVEQAEELLKEM 295
G+ + + + EM+KN + P +TY LI L + E+A +LL+ M
Sbjct: 483 DGFVIHNKFEGASIFLM-EMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMM 537
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Query: 186 IGIYDE-------MVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLS 235
+G +DE M +P+ +TY+ ++ G C R EA+ + D+M+ G PD +
Sbjct: 383 VGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKT 442
Query: 236 YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEM 295
+ +LI G+ + + +A ML+ G D D LI G I+++ E A L EM
Sbjct: 443 WTILIQGHC-KNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEM 501
Query: 296 VSKGICTPDDKKYLILTD 313
V P Y +L D
Sbjct: 502 VKNANVKPWQSTYKLLID 519
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 137/348 (39%), Gaps = 50/348 (14%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYK--- 63
+ IT L+ C + + A ++ +EM D +SY +M
Sbjct: 149 NSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR---------DSYRILMKGFCL 199
Query: 64 EGGLEEASDLLPEMLEL--ESGLVPHTLIYDTLIDECCTKG-----------IGTKG--- 107
EG LEEA+ LL M + G ++Y L+D C G I KG
Sbjct: 200 EGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKA 259
Query: 108 ---------------SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAED 152
S + I++ E + RG P + +Y+ + LFE G+ E+
Sbjct: 260 PKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEE 319
Query: 153 MIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD-EMVEKRIQPNLLTYNTMMLGH 211
++ M+ KG + + Y + + + + + + EM++ P + YN ++ G
Sbjct: 320 VLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGL 379
Query: 212 C---RCSEAQKLFDKM-KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
C + EA KM K + +Y L+ G R G EA +V +EML P
Sbjct: 380 CDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLC-RDGQFLEASQVMEEMLIKSHFP 438
Query: 268 TFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMV 315
TY +I GL +A L+EMVS+ + P+ + L + V
Sbjct: 439 GVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDM-VPESSVWKALAESV 485
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 8/225 (3%)
Query: 101 KGIGTKGSLDEIDKAVAYKDEMIS-RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQE 159
KG +G L+E + IS +G IV Y +L++AL + G A +++ ++
Sbjct: 195 KGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILR 254
Query: 160 KGLKLDVYTYNTLMSGY--AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTM---MLGHCRC 214
KGLK Y+ + +G+ + + I+ + E + + P L +Y+ M + +
Sbjct: 255 KGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKL 314
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRV-RDEMLKNGIDPTFTTYD 273
E +++ M++ G +P Y + R G +KEA V EM++ PT Y+
Sbjct: 315 VEGEEVLLAMRSKGFEPTPFIYGAKVKALC-RAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
Query: 274 ALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
LI GL + + +A LK+M + C +++ Y L D + R+
Sbjct: 374 VLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRD 418
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 137/348 (39%), Gaps = 50/348 (14%)
Query: 7 DPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFVMYK--- 63
+ IT L+ C + + A ++ +EM D +SY +M
Sbjct: 149 NSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR---------DSYRILMKGFCL 199
Query: 64 EGGLEEASDLLPEMLEL--ESGLVPHTLIYDTLIDECCTKG-----------IGTKG--- 107
EG LEEA+ LL M + G ++Y L+D C G I KG
Sbjct: 200 EGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKA 259
Query: 108 ---------------SLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAED 152
S + I++ E + RG P + +Y+ + LFE G+ E+
Sbjct: 260 PKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEE 319
Query: 153 MIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYD-EMVEKRIQPNLLTYNTMMLGH 211
++ M+ KG + + Y + + + + + + EM++ P + YN ++ G
Sbjct: 320 VLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGL 379
Query: 212 C---RCSEAQKLFDKM-KTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
C + EA KM K + +Y L+ G R G EA +V +EML P
Sbjct: 380 CDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLC-RDGQFLEASQVMEEMLIKSHFP 438
Query: 268 TFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMV 315
TY +I GL +A L+EMVS+ + P+ + L + V
Sbjct: 439 GVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDM-VPESSVWKALAESV 485
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 8/225 (3%)
Query: 101 KGIGTKGSLDEIDKAVAYKDEMIS-RGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQE 159
KG +G L+E + IS +G IV Y +L++AL + G A +++ ++
Sbjct: 195 KGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILR 254
Query: 160 KGLKLDVYTYNTLMSGY--AKCKYIDAHIGIYDEMVEKRIQPNLLTYNTM---MLGHCRC 214
KGLK Y+ + +G+ + + I+ + E + + P L +Y+ M + +
Sbjct: 255 KGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKL 314
Query: 215 SEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRV-RDEMLKNGIDPTFTTYD 273
E +++ M++ G +P Y + R G +KEA V EM++ PT Y+
Sbjct: 315 VEGEEVLLAMRSKGFEPTPFIYGAKVKALC-RAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
Query: 274 ALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVHRE 318
LI GL + + +A LK+M + C +++ Y L D + R+
Sbjct: 374 VLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRD 418
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 30/242 (12%)
Query: 1 MLKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLVRYAYSDNSYNFV 60
M K+GF+ T L+ CC +L+K++ S G Y+ +N++
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDR------VDLIKQLHCFS--VSGGFDSYSSVNNAFVTY 182
Query: 61 MYKEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKD 120
K G L EA + M EL + +++I G E KA+A
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIV-------------AYGQHKEGAKALALYK 229
Query: 121 EMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCK 180
EMI +G + + T ++ AL + G ++ + G + + + L+ Y+KC
Sbjct: 230 EMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG 289
Query: 181 YIDAHIGIYD--EMVEKRIQPNLLTYNTMMLGHCR----CSEAQKLFDKMKTSGIKPDHL 234
D G+YD ++ ++ + P+L+ +NTM+ G+ EA K F +M+ G +PD
Sbjct: 290 GCD---GMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDC 346
Query: 235 SY 236
S+
Sbjct: 347 SF 348
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
EP + +Y ++++A + + A + E+ + D +YNTL+SGYA + A +
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQP----DTVSYNTLISGYADARETFAAMV 126
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDKMKTSGIKPDHLSYNLLIAGYSYRG 247
++ M + + + T + ++ C + K SG + S N Y +G
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 248 GYVKEAFRV-------RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGI 300
G ++EA V RDE+ +++++I+ + E +A L KEM+ KG
Sbjct: 187 GLLREAVSVFYGMDELRDEV----------SWNSMIVAYGQHKEGAKALALYKEMIFKGF 236
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 103/223 (46%), Gaps = 14/223 (6%)
Query: 81 ESGLVPHTLIYDTLIDECCTKG-------IGTKGSLDEIDKAVAYKDEMISRGIEPTIVT 133
+ G +Y+ + E C G I L++ +KA DEM+ +G + +V
Sbjct: 366 QRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVA 425
Query: 134 YTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMV 193
Y+ +++ + R A ++ +M+++G K +++ YN+L+ + + + I+ EM
Sbjct: 426 YSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMK 485
Query: 194 EKRIQPNLLTYNTMMLGHCRCSEAQK---LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYV 250
++ P+ ++Y +M+ + R E ++ L+ + + + K D +++ +S + +
Sbjct: 486 RAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFS-KTSRI 544
Query: 251 KEAFRVRDEMLKNGIDPTFTTYDALILGLR---INHEVEQAEE 290
E R+ +M G Y + + LR +N ++ +E
Sbjct: 545 DELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQE 587
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 139/313 (44%), Gaps = 38/313 (12%)
Query: 9 TITTYKALVLGCCTHHEVEQAKELLKEMKRASDMS-DSGLVRYAYSDNSYNFVMYKEGGL 67
+ T+ ++ G ++ V+ A++L + M +++S S L+ Y S G +
Sbjct: 202 NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLS-----------GRI 250
Query: 68 EEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEMISRGI 127
E+A + E++ ++ + + +I G G G EI KA D M R
Sbjct: 251 EDAEEFF-EVMPMKPVIACNAMIV----------GFGEVG---EISKARRVFDLMEDR-- 294
Query: 128 EPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYIDAHIG 187
T+ +I+A G A D+ +MQ++G++ + +++S A +
Sbjct: 295 --DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQ 352
Query: 188 IYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSYNLLIAGYS 244
++ +V + ++ + +M + +C E A+ +FD+ + D + +N +I+GY+
Sbjct: 353 VHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK----DIIMWNSIISGYA 408
Query: 245 YRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPD 304
G +EA ++ EM +G P T A++ ++E+ E+ + M SK TP
Sbjct: 409 SHG-LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Query: 305 DKKYLILTDMVHR 317
+ Y DM+ R
Sbjct: 468 VEHYSCTVDMLGR 480
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 48/241 (19%)
Query: 115 AVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMS 174
A+ Y +M SR ++P TY +I A+ E+ + A+ + + L +V+ L+
Sbjct: 422 ALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVD 481
Query: 175 GYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQKLFDKMKTSGIKP 231
YAKC I I+D M E+ + T+N M+ G H A +LF++M+ IKP
Sbjct: 482 MYAKCGAIMIARLIFDMMSERHVT----TWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
Query: 232 DHLSYNLLIAGYSY-----------------------------------RGGYVKEAFRV 256
+ +++ +I+ S+ R G + EA+
Sbjct: 538 NGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW-- 595
Query: 257 RDEMLKNGIDPTFTTYDALILGLRINHEVEQAEELLKEMVSKGICTPDDKKYLILTDMVH 316
D +++ + P Y A++ +I+ V AE+ + + PDD Y +L ++
Sbjct: 596 -DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE---LNPDDGGYHVLLANIY 651
Query: 317 R 317
R
Sbjct: 652 R 652
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 63 KEGGLEEASDLLPEMLELESGLVPHTLIYDTLIDECCTKGIGTKGSLDEIDKAVAYKDEM 122
K G LE A L MLE + + ++++ID + +A+ +M
Sbjct: 283 KCGSLETARQLFDGMLE------RNVVSWNSMIDAYVQN--------ENPKEAMLIFQKM 328
Query: 123 ISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKCKYI 182
+ G++PT V+ + A ++G + K E GL +V N+L+S Y KCK +
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 388
Query: 183 DAHIGIYDEMVEKRIQPNLLTYNTMMLGHC---RCSEAQKLFDKMKTSGIKPDHLSYNLL 239
D ++ ++ + L+++N M+LG R +A F +M++ +KPD +Y +
Sbjct: 389 DTAASMFGKLQSR----TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSV 444
Query: 240 IAG 242
I
Sbjct: 445 ITA 447
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 125/301 (41%), Gaps = 43/301 (14%)
Query: 2 LKVGFDPTITTYKALVLGCCTHHEVEQAKELLKEMKRASDMSDSGLV-RYAYSDNSYNFV 60
++ GFD + ALV +E A++L M + +S + ++ Y ++N +
Sbjct: 263 MRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAM 322
Query: 61 MYKE---------------GGLEEASDL-------LPEMLELESGLVPHTLIYDTLIDEC 98
+ + G L +DL L +E GL + + ++LI
Sbjct: 323 LIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMY 382
Query: 99 CTKGIGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQ 158
C E+D A + ++ SR T+V++ +I + GR A + +M+
Sbjct: 383 C--------KCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 159 EKGLKLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE-- 216
+ +K D +TY ++++ A+ I+ ++ + N+ ++ + +C
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490
Query: 217 -AQKLFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDAL 275
A+ +FD M + ++N +I GY G+ K A + +EM K I P T+ ++
Sbjct: 491 IARLIFDMMSERHVT----TWNAMIDGYGTH-GFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 276 I 276
I
Sbjct: 546 I 546
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 109 LDEIDKAVAYKDEMISRGIEPTIVTYTLLI-----EALFEVGRSWGAEDMIKEMQEKGLK 163
+ ++DKA+ + M +EP + +T L+ EA VG+ ++ + + G
Sbjct: 113 VSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK-----EIHGLLVKSGFS 167
Query: 164 LDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSEAQKLFDK 223
LD++ L + YAKC+ ++ ++D M E+ +L+++NT++ G+ + A+ +
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNGMARMALEM 223
Query: 224 MKT---SGIKPDHLS-YNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL 279
+K+ +KP ++ ++L A + R + + +++G D AL+
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALR--LISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 280 RINHEVEQAEELLKEMVSKGICT 302
+E A +L M+ + + +
Sbjct: 282 AKCGSLETARQLFDGMLERNVVS 304
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 103 IGTKGSLDEIDKAVAYKDEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGL 162
I L + + A+A +M G++P T+ +++A +G E + +++ ++G
Sbjct: 167 ISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGF 226
Query: 163 KLDVYTYNTLMSGYAKCKYIDAHIGIYDEMVEKRIQPNLLTYNTMMLG---HCRCSEAQK 219
DVY N L+ YAKC I ++D + K + +++N+M+ G H EA
Sbjct: 227 GYDVYVLNALVVMYAKCGDIVKARNVFDMIPHK----DYVSWNSMLTGYLHHGLLHEALD 282
Query: 220 LFDKMKTSGIKPDHLSYNLLIAGYSYRGGYVKEAFRVRDEMLKNGIDPTFTTYDALILGL 279
+F M +GI+PD ++ + ++A R K ++ +++ G++ + +ALI+
Sbjct: 283 IFRLMVQNGIEPDKVAISSVLA----RVLSFKHGRQLHGWVIRRGMEWELSVANALIVLY 338
Query: 280 RINHEVEQAEELLKEMVSK 298
++ QA + +M+ +
Sbjct: 339 SKRGQLGQACFIFDQMLER 357
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 120 DEMISRGIEPTIVTYTLLIEALFEVGRSWGAEDMIKEMQEKGLKLDVYTYNTLMSGYAKC 179
D M R P + LI E+G+ A + +M E G+K D +T+ ++
Sbjct: 151 DRMSKRDSSP--FAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 180 KYIDAHIGIYDEMVEKRIQPNLLTYNTMMLGHCRCSE---AQKLFDKMKTSGIKPDHLSY 236
+ I+ ++V++ ++ N +++ + +C + A+ +FD + D++S+
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP----HKDYVSW 264
Query: 237 NLLIAGYSYRGGYVKEAFRVRDEMLKNGIDP 267
N ++ GY + G + EA + M++NGI+P
Sbjct: 265 NSMLTGYLHH-GLLHEALDIFRLMVQNGIEP 294