Miyakogusa Predicted Gene
- Lj3g3v3336280.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3336280.1 Non Chatacterized Hit- tr|I3SWP1|I3SWP1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED,Protein of
unknown function DUF716,,CUFF.45596.1
(293 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G49470.1 | Symbols: | Family of unknown function (DUF716) |... 267 8e-72
AT1G55230.1 | Symbols: | Family of unknown function (DUF716) |... 148 4e-36
AT1G55240.1 | Symbols: | Family of unknown function (DUF716) |... 139 2e-33
AT5G19870.1 | Symbols: | Family of unknown function (DUF716) |... 116 2e-26
AT1G32120.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 99 4e-21
>AT1G49470.1 | Symbols: | Family of unknown function (DUF716) |
chr1:18310554-18311462 FORWARD LENGTH=302
Length = 302
Score = 267 bits (682), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 146/292 (50%), Positives = 187/292 (64%), Gaps = 13/292 (4%)
Query: 1 MSLFVEHLVQXXXXXXXXXWHTINTIKSYLVKGPANFTVRFWFQFNTPLARLKHLELVSI 60
M F+ H V WH NTI+SY +KGP F+ +FWF P +LKHLEL+ I
Sbjct: 1 MGTFLGHFVPGLSLALLGLWHLFNTIRSYCLKGPEAFSAKFWF----PFPKLKHLELILI 56
Query: 61 LCFSILAIFTQILDFPNFHYA-FKLHNFEHATMFIHLALFAGFSLSIELTDSLDIFSGFV 119
L FS L+I LDFPNF+++ K N EHA+MF+HL +FA F+L ELT D+FSG +
Sbjct: 57 LFFSFLSITLLTLDFPNFNFSSLKPDNLEHASMFLHLIIFACFALFCELTLCSDLFSGLI 116
Query: 120 GILASSMFSQELFLLHFHSTDHVGLEGHYHWXXXXXXXXXXXXAMAAAIFPQSFNAALVL 179
G+L++S+F+QELFLLHFHSTDH GLEGHYH+ A+A+A FP+SF+AAL L
Sbjct: 117 GVLSASVFAQELFLLHFHSTDHSGLEGHYHFLLQLIAFVSFSSALASASFPKSFSAALFL 176
Query: 180 SISIIFQGCWFINMGFMLWIPACIPEGCV--MNTAKPNQSRIL---GAVACGSKEADFRA 234
IS++FQGCWF+NMGFMLWIP +P GCV M+T+ N R + GAVAC S A+ RA
Sbjct: 177 PISVMFQGCWFLNMGFMLWIPEYVPRGCVSNMSTSTDNNRRSVYHSGAVACESPGAEIRA 236
Query: 235 RGLANLQFSWXXXXXXXXXXXXCLKLARKCT---ILDRLEYERIQNKGTDST 283
+ LANLQFSW CLK + K I LEYER+ +G+D +
Sbjct: 237 KALANLQFSWMLSAILIITCALCLKYSGKVVLPKIRSSLEYERLCRQGSDRS 288
>AT1G55230.1 | Symbols: | Family of unknown function (DUF716) |
chr1:20602895-20603797 FORWARD LENGTH=300
Length = 300
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 131/254 (51%), Gaps = 20/254 (7%)
Query: 1 MSLFVEHLVQXXXXXXXXXWHTINTIKSYLVKGPANFTVRFWFQFNTPLARLKHLELVSI 60
M V H+ WH N IK + + P FT WF P ++L+HLEL I
Sbjct: 1 MGTLVGHVAPGFAFFALGLWHLFNNIKLFCLN-PNTFTSSPWF----PTSKLRHLELYII 55
Query: 61 LCFSILAIFTQILDFPNFHYAFK---------LHNFEHATMFIHLALFAGFSLSIELTDS 111
+ S ++I +++ P H F LHNFEH+++ + ++A F++ ++
Sbjct: 56 MVCSSISIASELFIGPKKHQPFDSDGTIPSNHLHNFEHSSISMSFLVYAIFAVVLDQERR 115
Query: 112 L-DIFSGFVGILASSMFSQELFLLHFHSTDHVGLEGHYHWXXXXXXXXXXXXAMAAAIFP 170
+I G ++ASS F+Q+LFL H HS DH+G+EG YH + P
Sbjct: 116 RSNISHGLTMLVASSAFAQQLFLFHLHSADHMGIEGQYHKLLQLIIFVSFLTTLIGITLP 175
Query: 171 QSFNAALVLSISIIFQGCWFINMGFMLWIPACIPEGCVMNTAKPNQSRILGAVACGSKEA 230
+SF + V S SI FQG WF+ MG+MLW P+ IP+GC ++ + +Q + C S +A
Sbjct: 176 KSFLVSFVRSSSITFQGVWFVVMGYMLWTPSLIPKGCFLHEEEGHQ-----VIKCSSDKA 230
Query: 231 DFRARGLANLQFSW 244
RA+ L N++FSW
Sbjct: 231 IHRAKSLVNIEFSW 244
>AT1G55240.1 | Symbols: | Family of unknown function (DUF716) |
chr1:20605015-20606185 FORWARD LENGTH=311
Length = 311
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 141/286 (49%), Gaps = 27/286 (9%)
Query: 1 MSLFVEHLVQXXXXXXXXXWHTINTIKSYLVKGPANFTVRFWFQFNTPLARLKHLELVSI 60
M F+ H++ WH N IK + + P F+ WF P+++L+HLEL I
Sbjct: 1 MGSFLGHVLPGFAFVALGLWHLFNNIKLFCLH-PNTFSSSTWF----PISKLRHLELYLI 55
Query: 61 LCFSILAIFTQILDFPNFHYAFK---------LHNFEHATMFIHLALFAGFSLSIELTDS 111
+ S +I ++ P H+ F LHNFEH+++ + ++A +L ++
Sbjct: 56 MLSSTASISMELFIGPRRHHPFDVDGTIPSNHLHNFEHSSISMSFLVYAVLALVLDRARP 115
Query: 112 LDIFS-GFVGILASSMFSQELFLLHFHSTDHVGLEGHYHWXXXXXXXXXXXXAMAAAIFP 170
S G + A++ FSQ+L L HFHSTDH+G+EG YH + P
Sbjct: 116 RAAASEGLTMLAAAAAFSQQLLLFHFHSTDHMGVEGQYHVILQVVIFVSLLTTIMGIFLP 175
Query: 171 QSFNAALVLSISIIFQGCWFINMGFMLWIPACIPEGCVMNTAKPNQSRILGAVACGSKEA 230
+SF +LV S SI FQG W I +G ML+ P+ IP+GC ++ ++ R + V C ++EA
Sbjct: 176 KSFLVSLVRSSSIAFQGVWLIVIGCMLYTPSLIPKGCYIH----DEGRHI-IVKCSTEEA 230
Query: 231 DFRARGLANLQFSWXXXXXXXXXXXXCLKLARKCTILDRLEYERIQ 276
RA+ L NL+FSW L ILDR+ E ++
Sbjct: 231 LHRAKSLVNLEFSWLFVTNTLFVVTLYL-------ILDRVYGENVE 269
>AT5G19870.1 | Symbols: | Family of unknown function (DUF716) |
chr5:6716182-6717012 REVERSE LENGTH=276
Length = 276
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 23/288 (7%)
Query: 1 MSLFVEHLVQXXXXXXXXXWHTINTIKSYLVKGPANFTVRFWFQFNTPLARLKHLELVSI 60
M V H++ WH N IK + + P ++ WF PL++ ++LE + I
Sbjct: 1 MGTLVGHILPGFFFFALGLWHLFNHIKIFSLH-PKSYIAPLWF----PLSKPRYLEPLVI 55
Query: 61 LCFSILAIFTQILDFPNFHYAFK----------LHNFEHATMFIHLALFAGFSLSIELTD 110
+ S L+I ++ H F LHNFEH+ + +A F++ + T
Sbjct: 56 IIASSLSISVELFLGQKNHQPFDPNDGTIPSNHLHNFEHSCISFTFITYAAFAIVFDKTR 115
Query: 111 SLDIFSGFVGILASSMFSQELFLLHFHSTDHVGLEGHYHWXXXXXXXXXXXXAMAAAIFP 170
+ + ++A+ F+Q+LFL HFHS+DH G+EGHYH + P
Sbjct: 116 PIA-HRSLINLIAALAFAQQLFLFHFHSSDHTGVEGHYHLLLQLVVFVSLVTTLLGIALP 174
Query: 171 QSFNAALVLSISIIFQGCWFINMGFMLWIPACIPEGCVMNTAKPNQSRILGAVACGSKEA 230
SF + V S+S+ FQG W ++M MLW P+ +P+ C ++ + + + C +A
Sbjct: 175 SSFILSFVRSLSVSFQGIWLMSMACMLWTPSLVPKDCFLHIEEGKHT-----IRCSDVKA 229
Query: 231 DFRARGLANLQFSWXXXXXXXXXXXXCLKLARKCTILDRLEYERIQNK 278
RA L N+QFSW + L R +++EY +++ K
Sbjct: 230 LHRAISLVNIQFSWFLVIITIFAMWFYIFLQRIYG--EKIEYSQLRTK 275
>AT1G32120.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Aminotransferase-like, plant mobile domain
(InterPro:IPR019557), Protein of unknown function DUF716
(InterPro:IPR006904); BEST Arabidopsis thaliana protein
match is: Aminotransferase-like, plant mobile domain
family protein (TAIR:AT1G51538.1); Has 16736 Blast hits
to 9656 proteins in 576 species: Archae - 4; Bacteria -
1182; Metazoa - 7098; Fungi - 2631; Plants - 1178;
Viruses - 174; Other Eukaryotes - 4469 (source: NCBI
BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206
Length = 1206
Score = 98.6 bits (244), Expect = 4e-21, Method: Composition-based stats.
Identities = 68/249 (27%), Positives = 110/249 (44%), Gaps = 18/249 (7%)
Query: 1 MSLFVEHLVQXXXXXXXXXWHTINTIKSYLVKGPANFTVRFWFQFNTPLARLKHLELVSI 60
M F H + WH +++ Y + P++F VR W R+K+LEL +
Sbjct: 943 MGSFKGHALPGTLFLVVGVWHIWSSVVRY-ISNPSSFRVRVWHPVPGFNDRIKYLELYVV 1001
Query: 61 LCFSILAIFTQILDFPNFHYAFK-------LHNFEHATMFIHLALFAGFSLSIELTDSLD 113
S + + + L + + +++FEH+ M + + +L E T L
Sbjct: 1002 TIGSFIDLCIEFLYSTHLKFFVNGVLNPSHMNDFEHSGMLLMFFILGFIALLSEKTRLLP 1061
Query: 114 IFSGFVGILASSMFSQELFLLHFHSTDHVGLEGHYHWXXXXXXXXXXXXAMAAAIFPQSF 173
+ + ++A++ F+ E L FHST H GLEG+YH ++A AI P SF
Sbjct: 1062 LPQEALCLIAATAFTAECLLFFFHSTSHKGLEGYYHLLLVFLIGLCVISSIAGAICPTSF 1121
Query: 174 NAALVLSISIIFQGCWFINMGFMLWIPACIPEGCVMNTAKPNQSRILGAVACGSKEADFR 233
L I++ QG WF F L+ P +P+GC + K N +V C S +++
Sbjct: 1122 PVDLCNGIAMTLQGLWFYQTAFTLYGPM-MPQGCSL---KQN------SVVCRSVDSEVS 1171
Query: 234 ARGLANLQF 242
LAN Q
Sbjct: 1172 GEFLANFQL 1180