Miyakogusa Predicted Gene
- Lj3g3v3336110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3336110.1 Non Chatacterized Hit- tr|I1NPY2|I1NPY2_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,27.25,2e-18,seg,NULL,CUFF.45583.1
(616 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40520.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 291 1e-78
AT5G40520.1 | Symbols: | unknown protein; Has 3679 Blast hits t... 219 6e-57
>AT5G40520.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 11 growth stages; Has 3696
Blast hits to 2485 proteins in 391 species: Archae - 10;
Bacteria - 571; Metazoa - 1013; Fungi - 530; Plants -
217; Viruses - 74; Other Eukaryotes - 1281 (source: NCBI
BLink). | chr5:16231515-16234276 REVERSE LENGTH=693
Length = 693
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 254/421 (60%), Gaps = 13/421 (3%)
Query: 3 FLRNDARTIVSHLKRQEKQIKLKRRWLLGIPSTKSERKKLDKIFKNSYMPESILREDDIF 62
F + D +I+S +K Q++QI+LKRRWLLG + S + K ++PES+LREDDIF
Sbjct: 9 FFKTDFGSILSQIKDQDEQIRLKRRWLLGCDMSDSTKDHTPG--KTEFVPESLLREDDIF 66
Query: 63 YESVRTHVEGALGAQSIERENHVPLDDMHLTQVSDMKRLILSCLNKLTTKGLHRLAMIVT 122
YE++++ VE A G + V +D+ ++ ++ L+ LT KGL+ +AMI+T
Sbjct: 67 YETIKSRVEEAFG---FCKNQQVVCNDVQQKELKFCDLELVRKLDSLTNKGLYLIAMILT 123
Query: 123 GGSIESVITRGNLKMIIKGXXXXXXXXXXDNHQQRETRGQLFQLLSDPQHFRDRS----G 178
GGS TR +K II+ + + E QL Q+LSDP +FR+ G
Sbjct: 124 GGSTSFDKTRLKMKEIIRDSVRRDFGKNKEGIGKEEIINQLHQVLSDPANFREDCRMNLG 183
Query: 179 PLPELRYQFYHASVSKVLDELPSLPTQTLNAMRMKLKGKKAPIPQLQPCKHGWDRDHLMK 238
P L + + KVL+EL SL TQTL AM+ KLKG + IPQL+ + G R L+
Sbjct: 184 RTPTLHS--HRDAAMKVLNELDSLSTQTLRAMKRKLKGSRM-IPQLKNSRRGQRRSDLIN 240
Query: 239 LVNNMSRKMLSQHDRGNELQEPLAKAMAVADLSLQVTNGDRSIFSEEFYQFSPEVMSLQS 298
V S KMLS+ G++LQE LAKA++V DLSL+++ G ++ + +F++FSPE +LQ+
Sbjct: 241 QVRQASEKMLSELSAGDKLQEQLAKALSVVDLSLKLSPGYKTAAATDFFRFSPETKNLQN 300
Query: 299 DIMNAIWSVKKVVTVLQLRDLQCRIEPKAVISNRSLRTAFANFLTEFLYECSDMDSIPKS 358
+I+ A+W ++KV +L+ L ++P+A +SN SLR+A L E+L+ECSD+D+IPKS
Sbjct: 301 EIVKAVWLLRKV-RFRELKRLHLCLDPEAEVSNDSLRSAVRKTLIEYLFECSDLDTIPKS 359
Query: 359 LSQILDVINKGSDSNMENASLHKHIEEEVDCILSVGAQTKQIVLDLLPEGEFDQDFTDAY 418
L + L ++N + + + IEEE +CIL+V AQ KQI +P E DQDF DAY
Sbjct: 360 LMEALSLVNSRTGNVEHKVCPREAIEEETECILNVSAQVKQIFCQCIPNYELDQDFGDAY 419
Query: 419 V 419
+
Sbjct: 420 M 420
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 72/122 (59%), Gaps = 8/122 (6%)
Query: 497 ENLQPKNFGAENLESMPSKYNACKNQYLAIQDACDKTSMLAYNIAGHMLEEFAITEGRDL 556
EN++ + G E P + N KNQYLAIQ+ D+TS++A+N+ G +LE+FA + +L
Sbjct: 577 ENIKSDDHG----EQKPRRRN--KNQYLAIQEISDETSLVAHNLIGRLLEKFADRQRLNL 630
Query: 557 NSSSTLYLSGDNQIEDREEI--KEPSSFGKHTMYSTVARIVKELSPSFPDRSMERLKMLM 614
+ YL G+++++++ E+ K+ +S + + + +VKE S + + RLK LM
Sbjct: 631 ETDERSYLGGESRLQEKVEVSEKKQASSQAKSDEAIILSVVKEQITSLEESVLMRLKELM 690
Query: 615 SL 616
+
Sbjct: 691 EV 692
>AT5G40520.1 | Symbols: | unknown protein; Has 3679 Blast hits to
2474 proteins in 390 species: Archae - 10; Bacteria -
571; Metazoa - 1012; Fungi - 528; Plants - 214; Viruses
- 74; Other Eukaryotes - 1270 (source: NCBI BLink). |
chr5:16231515-16233546 REVERSE LENGTH=574
Length = 574
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 185/305 (60%), Gaps = 8/305 (2%)
Query: 119 MIVTGGSIESVITRGNLKMIIKGXXXXXXXXXXDNHQQRETRGQLFQLLSDPQHFRDRS- 177
MI+TGGS TR +K II+ + + E QL Q+LSDP +FR+
Sbjct: 1 MILTGGSTSFDKTRLKMKEIIRDSVRRDFGKNKEGIGKEEIINQLHQVLSDPANFREDCR 60
Query: 178 ---GPLPELRYQFYHASVSKVLDELPSLPTQTLNAMRMKLKGKKAPIPQLQPCKHGWDRD 234
G P L + + KVL+EL SL TQTL AM+ KLKG + IPQL+ + G R
Sbjct: 61 MNLGRTPTL--HSHRDAAMKVLNELDSLSTQTLRAMKRKLKGSRM-IPQLKNSRRGQRRS 117
Query: 235 HLMKLVNNMSRKMLSQHDRGNELQEPLAKAMAVADLSLQVTNGDRSIFSEEFYQFSPEVM 294
L+ V S KMLS+ G++LQE LAKA++V DLSL+++ G ++ + +F++FSPE
Sbjct: 118 DLINQVRQASEKMLSELSAGDKLQEQLAKALSVVDLSLKLSPGYKTAAATDFFRFSPETK 177
Query: 295 SLQSDIMNAIWSVKKVVTVLQLRDLQCRIEPKAVISNRSLRTAFANFLTEFLYECSDMDS 354
+LQ++I+ A+W ++KV +L+ L ++P+A +SN SLR+A L E+L+ECSD+D+
Sbjct: 178 NLQNEIVKAVWLLRKV-RFRELKRLHLCLDPEAEVSNDSLRSAVRKTLIEYLFECSDLDT 236
Query: 355 IPKSLSQILDVINKGSDSNMENASLHKHIEEEVDCILSVGAQTKQIVLDLLPEGEFDQDF 414
IPKSL + L ++N + + + IEEE +CIL+V AQ KQI +P E DQDF
Sbjct: 237 IPKSLMEALSLVNSRTGNVEHKVCPREAIEEETECILNVSAQVKQIFCQCIPNYELDQDF 296
Query: 415 TDAYV 419
DAY+
Sbjct: 297 GDAYM 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 72/122 (59%), Gaps = 8/122 (6%)
Query: 497 ENLQPKNFGAENLESMPSKYNACKNQYLAIQDACDKTSMLAYNIAGHMLEEFAITEGRDL 556
EN++ + G E P + N KNQYLAIQ+ D+TS++A+N+ G +LE+FA + +L
Sbjct: 458 ENIKSDDHG----EQKPRRRN--KNQYLAIQEISDETSLVAHNLIGRLLEKFADRQRLNL 511
Query: 557 NSSSTLYLSGDNQIEDREEI--KEPSSFGKHTMYSTVARIVKELSPSFPDRSMERLKMLM 614
+ YL G+++++++ E+ K+ +S + + + +VKE S + + RLK LM
Sbjct: 512 ETDERSYLGGESRLQEKVEVSEKKQASSQAKSDEAIILSVVKEQITSLEESVLMRLKELM 571
Query: 615 SL 616
+
Sbjct: 572 EV 573