Miyakogusa Predicted Gene
- Lj3g3v3314920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3314920.1 Non Chatacterized Hit- tr|F6HQE5|F6HQE5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40,4e-18,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; SUBFAMI,CUFF.45560.1
(127 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 92 1e-19
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-15
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-15
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-15
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-14
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-14
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-14
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-13
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 72 1e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-13
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-13
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 70 5e-13
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-13
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-12
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-12
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-12
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 67 4e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-12
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-12
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-12
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-12
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-12
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 1e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-11
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-11
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-11
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-11
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 64 2e-11
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 64 2e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-11
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-11
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-11
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-11
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-11
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 62 7e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-10
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-10
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-10
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 59 6e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-10
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 59 7e-10
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-10
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-10
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-09
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-09
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-09
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 56 6e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 56 6e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 56 6e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 55 1e-08
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 55 2e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 2e-08
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 54 3e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 53 4e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-08
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 53 5e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-08
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 53 6e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-08
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 52 1e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 5e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-07
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 9e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 2e-06
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 2e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 47 2e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 2e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 3e-06
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 3e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 5e-06
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 5e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 7e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 45 8e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 45 8e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 91.7 bits (226), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I +C A ++M+ +GL P+E+TY++L GF + +A +VL
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD-----GFSQKGYMNEAYRVLR 404
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
EM D+GFSPSVV YN LI+ +C G +E A+ +L M E+GLSPD SYS V+S F
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTG---KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 123 QIWEL 127
+ +++
Sbjct: 462 RSYDV 466
Score = 86.3 bits (212), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N VI GLC E R +E V EM R+G + DE TY++L +C G + +A +
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF-----HQALVMH 333
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+EM+ G +PSV+ Y LIHS C G + +A+E L M RGL P+ +Y+ ++ F
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAG---NMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 122 GQ 123
Q
Sbjct: 391 SQ 392
Score = 80.5 bits (197), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I G CV + E+A AV E+MK KGL+PD +YS++ FC SY ++A +V
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC-----RSYDVDEALRVK 473
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM++ G P + Y+ LI +C + ++A ++ M GL PD +Y+ +I+ +
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCE---QRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Score = 65.5 bits (158), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+++IQG C +RR +EA ++EEM R GL PDE TY++L + +C G EKA ++
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL-----EKALQLH 543
Query: 62 SEMIDSGFSPSVVEYNKLIH 81
+EM++ G P VV Y+ LI+
Sbjct: 544 NEMVEKGVLPDVVTYSVLIN 563
Score = 55.8 bits (133), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 2 NAVIQGLCVERRK-EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
NAV+ +R AE VF+EM ++P+ TY+ L FC G + A +
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNI-----DVALTL 227
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+M G P+VV YN LI YC ++ ++LRSM +GL P+ SY+ VI+
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKL---RKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 20/126 (15%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFC-----DWGFYASYWSEK 56
N +I+G C + A +F++M+ KG P+ TY++L +C D GF
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF-------- 260
Query: 57 ADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVE-ILRSMPERGLSPDAESYS 115
K+L M G P+++ YN +I+ C EG K V +L M RG S D +Y+
Sbjct: 261 --KLLRSMALKGLEPNLISYNVVINGLC----REGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 116 NVISKF 121
+I +
Sbjct: 315 TLIKGY 320
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
++ GL + ++AE +F EM+ KG+APD +Y L + F G +KA +
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG-----NMQKASSIF 650
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM++ G +P+V+ YN L+ +C G +EKA E+L M +GL P+A +Y +I +
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGE---IEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 122 GQIWEL 127
+ +L
Sbjct: 708 CKSGDL 713
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+I G ++A ++F+EM +GL P+ Y+ L FC G EKA ++L
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG-----EIEKAKELLD 686
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM G P+ V Y +I YC G + +A + M +GL PD+ Y+ ++
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSG---DLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I GL +R +EA + EM GL P+ TY + + + +AS ADK +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS-----ADKYV 545
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
EM + G P+ V LI+ YC G V +A RSM ++G+ DA++Y+ +++
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKG---KVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I+G C E+ + + EMK++ + TY ++ C G + A ++
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL-----DGAYNIVK 441
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EMI SG P+VV Y LI ++ A+ +L+ M E+G++PD Y+++I
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQ---NSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+I C + + EA + + M +G+ D KTY+ L + G + + + A+++
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN-----GLFKNDKVDDAEEIF 615
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM G +P V Y LI+ + G ++KA I M E GL+P+ Y+ ++ F
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLG---NMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 122 GQIWEL 127
+ E+
Sbjct: 673 CRSGEI 678
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I GLC +R E+A+++ EM G++ D TYS L G ++ A ++
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID-----GLLKGRNADAAKGLV 335
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM+ G + Y+ I C E +EKA + M GL P A++Y+++I
Sbjct: 336 HEMVSHGINIKPYMYDCCI---CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
V++G+C + A + +EM G P+ Y++L F + A +VL
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD-----AMRVLK 476
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM + G +P + YN LI + +++A L M E GL P+A +Y IS +
Sbjct: 477 EMKEQGIAPDIFCYNSLI---IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 77.4 bits (189), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I+ LC RK EA + +EM+ G+ P+ TY+ L C + EKA ++L +
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF-----EKARELLGQ 383
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M++ G P+V+ YN LI+ YC G +E AV+++ M R LSP+ +Y+ +I +
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGM---IEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Score = 65.5 bits (158), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I G C E+A V E M+ + L+P+ +TY+ L +C + KA VL
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH------KAMGVL 450
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++M++ P VV YN LI C G + A +L M +RGL PD +Y+++I
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSG---NFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I GLC + + +EA + E+M + GL P T + L H G + +S
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR-----F 625
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M+ SG P Y I +YC E + A +++ M E G+SPD +YS++I +
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCR---EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 122 GQI 124
G +
Sbjct: 683 GDL 685
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 20/129 (15%)
Query: 5 IQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEM 64
IQ C E R +AE + +M+ G++PD TYSSL + D G + A VL M
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG-----QTNFAFDVLKRM 698
Query: 65 IDSGFSPSVVEYNKLIHSYCS--WGWEEGVE-------------KAVEILRSMPERGLSP 109
D+G PS + LI +G ++G E VE+L M E ++P
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758
Query: 110 DAESYSNVI 118
+A+SY +I
Sbjct: 759 NAKSYEKLI 767
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I G C + A + M +GL PD+ TY+S+ C S E+A +
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK-----SKRVEEACDLF 520
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ G +P+VV Y LI YC G V++A +L M + P++ +++ +I
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAG---KVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I LC +R EEA +F+ +++KG+ P+ Y++L +C G ++A +L
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV-----DEAHLMLE 556
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M+ P+ + +N LIH C+ G +++A + M + GL P + + +I +
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADG---KLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I G C + + A VF EM KG +E Y+ L H C + ++A +
Sbjct: 258 SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC-----VARRIDEAMDLFV 312
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M D P+V Y LI S C E +A+ +++ M E G+ P+ +Y+ +I
Sbjct: 313 KMKDDECFPTVRTYTVLIKSLCG---SERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Score = 48.9 bits (115), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
+E + V+ EM + P+ TY+ + + +C G E+A++ +S+++++G P
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNV-----EEANQYVSKIVEAGLDPDFF 254
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
Y LI YC + ++ A ++ MP +G + +Y+++I
Sbjct: 255 TYTSLIMGYCQ---RKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 295
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
+EA VFEEMK G + D+ TY++L ++ S+ ++A KVL+EM+ +GFSPS+V
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYG-----KSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
YN LI +Y G +++A+E+ M E+G PD +Y+ ++S F
Sbjct: 351 TYNSLISAYARDGM---LDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
EAE F E+K +G +PD T +S+ ++ A KA+ VL M + GF+PS+
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA-----KANGVLDYMKERGFTPSMAT 666
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
YN L++ + S + G K+ EILR + +G+ PD SY+ VI
Sbjct: 667 YNSLMYMH-SRSADFG--KSEEILREILAKGIKPDIISYNTVI 706
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLF---CDWGFYASYWSEKADKVLSEMIDSGFSPS 72
+A V + MK +G P TY+SL ++ D+G K++++L E++ G P
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG--------KSEEILREILAKGIKPD 698
Query: 73 VVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
++ YN +I++YC + A I M G+ PD +Y+ I +
Sbjct: 699 IISYNTVIYAYCR---NTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N VI C R +A +F EM+ G+ PD TY++ + A E+A V+
Sbjct: 703 NTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI-----GSYAADSMFEEAIGVV 757
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSM 102
MI G P+ YN ++ YC ++ + VE LR++
Sbjct: 758 RYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
E VF+EMKR G P+ +T+++L + G + E+A V M+D+G +P +
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF-----EQAMTVYRRMLDAGVTPDLST 526
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQIWEL 127
YN ++ + G E EK +L M + P+ +Y +++ + E+
Sbjct: 527 YNTVLAALARGGMWEQSEK---VLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I + +EA + +M KG PD TY++L GF + E A +
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS-----GFERAGKVESAMSIF 407
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPER---GLSPDAESYSNVI 118
EM ++G P++ +N I Y + G K E+++ E GLSPD +++ ++
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRG------KFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 119 SKFGQ 123
+ FGQ
Sbjct: 462 AVFGQ 466
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 35/144 (24%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWG--------------------------- 47
E A ++FEEM+ G P+ T+++ ++ + G
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 48 ---FYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPE 104
F + + V EM +GF P +N LI +Y G E+A+ + R M +
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG---SFEQAMTVYRRMLD 517
Query: 105 RGLSPDAESYSNVISKF--GQIWE 126
G++PD +Y+ V++ G +WE
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWE 541
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GLC E + EA V ++MK G+ P+ TY++L FC G KA +
Sbjct: 307 NTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG-----KALSLC 361
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
++ G SPS+V YN L+ +C G G K V + M ERG+ P +Y+ +I F
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV---KEMEERGIKPSKVTYTILIDTF 418
Query: 122 GQ 123
+
Sbjct: 419 AR 420
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N V+ LC + R ++A VF+EM+ +G++ + TY++L C +A+KV+
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC-----REMKLNEANKVV 326
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M G +P+++ YN LI +C G + KA+ + R + RGLSP +Y+ ++S F
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGK---LGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
E+A + M+ GL PD TYS L H FC G +A ++ M++ P+ V
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG-----QMNEASRLFKSMVEKNCEPNEV 479
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
YN +I YC G +A+++L+ M E+ L+P+ SY +I
Sbjct: 480 IYNTMILGYCKEGSS---YRALKLLKEMEEKELAPNVASYRYMI 520
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+I G C + E+A+ +F EM + GL +E+TY+ L + G + + ++ ++
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN-----GLFKNGVKKQGFEMYE 257
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M + G P++ YN +++ C G + A ++ M ERG+S + +Y+ +I
Sbjct: 258 KMQEDGVFPNLYTYNCVMNQLCKDGR---TKDAFQVFDEMRERGVSCNIVTYNTLI 310
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+I G C++ + EA +F+ M K P+E Y+++ +C G +SY +A K+L
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG--SSY---RALKLLK 502
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
EM + +P+V Y +I C + E+ VE M + G+ P S
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE---KMIDSGIDPSTSILS 552
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 76.6 bits (187), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 71/120 (59%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GLC + ++A +F EM KG+ PD TYSSL C++G WS+ A ++L
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG----RWSD-ASRLL 316
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
S+MI+ +P+VV ++ LI ++ E + +A ++ M +R + PD +YS++I+ F
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVK---EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Score = 65.5 bits (158), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I+G C +R EE +F EM ++GL + TY++L H GF+ + + A V
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH-----GFFQARDCDNAQMVF 456
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS-- 119
+M+ G P+++ YN L+ C G + KA+ + + + PD +Y+ +I
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNG---KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 120 -KFGQI---WEL 127
K G++ WEL
Sbjct: 514 CKAGKVEDGWEL 525
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I E + EAE +++EM ++ + PD TYSSL + FC ++A +
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC-----MHDRLDEAKHMF 386
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI P+VV Y+ LI +C + VE+ +E+ R M +RGL + +Y+ +I F
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCK---AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 122 GQ 123
Q
Sbjct: 444 FQ 445
Score = 52.8 bits (125), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+++++ G C +R +A A+ ++M G PD T+++L H G + + +A +
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH-----GLFLHNKASEAVAL 210
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ +M+ G P +V Y +++ C G ++ A+ +L+ M + + D Y+ +I
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRG---DIDLALSLLKKMEKGKIEADVVIYNTII 265
Score = 48.9 bits (115), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+G+C + E+ +F + KG++P+ Y+++ FC G E+AD +L
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS-----KEEADSLL 561
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAES 113
+M + G P+ YN LI + G E + E+++ M G + DA +
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREA---SAELIKEMRSCGFAGDAST 610
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 22 EEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIH 81
E+M+ G++ D TYS + FC + A VL++M+ G+ P +V + L++
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLS-----LALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 82 SYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
YC + + AV ++ M E G PD +++ +I
Sbjct: 162 GYCH---SKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 75.5 bits (184), Expect = 9e-15, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I GLC + +EA EEMK KG+ P+ TYSSL C G S +A ++
Sbjct: 232 SLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDG-----RSLQAMELFE 286
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
M+ G P++V Y LI C E+ +++AVE+L M +GL PDA Y VIS F
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCK---EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 123 QI 124
I
Sbjct: 344 AI 345
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 1 MNAVIQGLCVERRKEEAEA---VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKA 57
+N +I+ LC R +A +F EM ++G PD TY +L C +G ++A
Sbjct: 159 LNVLIKALC--RNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRI-----DEA 211
Query: 58 DKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
K+ +EM++ +P+VV Y LI+ C + V++A+ L M +G+ P+ +YS++
Sbjct: 212 KKLFTEMVEKDCAPTVVTYTSLINGLCG---SKNVDEAMRYLEEMKSKGIEPNVFTYSSL 268
Query: 118 I 118
+
Sbjct: 269 M 269
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I GLC E++ +EA + + M +GL PD Y + FC S + E A+ L E
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC----AISKFREAAN-FLDE 357
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGV-----EKAVEILRSMPERGLSPDAESYSNVI 118
MI G +P+ + +N IH S G+ +A + SM RG+S + E+ +++
Sbjct: 358 MILGGITPNRLTWN--IHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLV 415
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 73.6 bits (179), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ G+C E R +EA +M G P+ T++ + C G W + A+K+L
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG----RWMD-AEKLL 332
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
++M+ GFSPSVV +N LI+ C G + +A++IL MP+ G P++ SY+ ++ F
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGL---LGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Score = 68.2 bits (165), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++ +C R +AE + +M RKG +P T++ L + C G +A +L
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG-----RAIDIL 367
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+M G P+ + YN L+H +C E+ +++A+E L M RG PD +Y+ +++
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCK---EKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I LC + A + E+M + G P+ +Y+ L H FC ++A + L
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK-----EKKMDRAIEYL 402
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M+ G P +V YN ++ + C G VE AVEIL + +G SP +Y+ VI
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDG---KVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 122 GQ 123
+
Sbjct: 460 AK 461
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ G C E++ + A E M +G PD TY+++ C G E A ++L
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV-----EDAVEIL 437
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI--- 118
+++ G SP ++ YN +I G KA+++L M + L PD +YS+++
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAG---KTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 119 SKFGQIWE 126
S+ G++ E
Sbjct: 495 SREGKVDE 502
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFC-DWGFYASYWSEKADKV 60
N +++ LC + ++A V + M ++ PD TY+ L C D G A K+
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV------GHAMKL 261
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
L EM D G +P VV YN L++ C E +++A++ L MP G P+ +++ ++
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICK---EGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C A +V + M ++PD TY+++ CD G ++A +VL
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKL-----KQAMEVL 227
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS---NVI 118
M+ P V+ Y LI + C + GV A+++L M +RG +PD +Y+ N I
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCR---DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 119 SKFGQIWE 126
K G++ E
Sbjct: 285 CKEGRLDE 292
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I+G C + +A + E ++ G PD TY+ + +C G + + LS
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG--------EINNALSV 194
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ SP VV YN ++ S C G +++A+E+L M +R PD +Y+ +I
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSG---KLKQAMEVLDRMLQRDCYPDVITYTILI 246
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N VI GL + +A + +EM+ K L PD TYSSL G ++A K
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG-----GLSREGKVDEAIKFF 507
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
E G P+ V +N ++ C ++A++ L M RG P+ SY+ +I
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCK---SRQTDRAIDFLVFMINRGCKPNETSYTILI 561
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 73.2 bits (178), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ VI LC R +++A +F EM+ KG+ P+ TYSSL C++ WS+ A ++L
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY----ERWSD-ASRLL 318
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
S+MI+ +P+VV +N LI ++ E + +A ++ M +R + PD +YS++I+ F
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVK---EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Score = 67.8 bits (164), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I E + EAE +++EM ++ + PD TYSSL + FC ++A +
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC-----MHDRLDEAKHMF 388
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI P+VV YN LI+ +C + +++ VE+ R M +RGL + +Y+ +I F
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCK---AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 122 GQ 123
Q
Sbjct: 446 FQ 447
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C +R +E +F EM ++GL + TY++L H GF+ + + A V
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH-----GFFQARDCDNAQMVF 458
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS-- 119
+M+ G P+++ YN L+ C G +EKA+ + + + P +Y+ +I
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNG---KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 120 -KFGQI---WEL 127
K G++ W+L
Sbjct: 516 CKAGKVEDGWDL 527
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ GLC + E+A VFE ++R + P TY+ + C G W +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD-----LF 528
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDA 111
+ G P V+ YN +I +C G + E+A + R M E G PD+
Sbjct: 529 CSLSLKGVKPDVIIYNTMISGFCRKGLK---EEADALFRKMREDGPLPDS 575
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+++++ G C +R +A A+ ++M G PD T+++L H G + + +A +
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH-----GLFLHNKASEAVAL 212
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ M+ G P++V Y +++ C G ++ A +L M + + YS VI
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRG---DIDLAFNLLNKMEAAKIEANVVIYSTVI 267
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 72.8 bits (177), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 70/120 (58%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ VI LC R ++A +F EM KG+ PD TYSSL C++G WS+ A ++L
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG----RWSD-ASRLL 298
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
S+M++ +P+VV +N LI ++ E + +A ++ M +R + P+ +Y+++I+ F
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAK---EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C ++ + +F +M R+GL + TY++L H GF+ + + A V
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH-----GFFQASDCDNAQMVF 438
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS-- 119
+M+ G P+++ YN L+ C G +EKA+ + + + + PD +Y N++S
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNG---KLEKAMVVFEYLQKSKMEPDIYTY-NIMSEG 494
Query: 120 --KFGQI---WEL 127
K G++ W+L
Sbjct: 495 MCKAGKVEDGWDL 507
Score = 62.4 bits (150), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I E + EAE +F+EM ++ + P+ TY+SL + FC ++A ++
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC-----MHDRLDEAQQIF 368
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ M+ P VV YN LI+ +C + V +E+ R M RGL + +Y+ +I F
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCK---AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 122 GQ 123
Q
Sbjct: 426 FQ 427
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ GLC + E+A VFE +++ + PD TY+ + C G W +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD-----LF 508
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ G P V+ YN +I +C G + E+A + M E G PD+ +Y+ +I
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLK---EEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 53.1 bits (126), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 37/151 (24%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N+++ G C R EA A+ ++M G PD T+++L H G + + +A +
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH-----GLFQHNKASEAVAL 192
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWG-----------WEEG------------------ 91
+ M+ G P +V Y +I+ C G E+G
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 92 ---VEKAVEILRSMPERGLSPDAESYSNVIS 119
V+ A+ + M +G+ PD +YS++IS
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 72.4 bits (176), Expect = 8e-14, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 72/120 (60%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ VI LC R +++A +F EM+ KG+ P+ TYSSL C++G WS+ A ++L
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG----RWSD-ASRLL 311
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
S+MI+ +P++V ++ LI ++ G + KA ++ M +R + P+ +YS++I+ F
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKG---KLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I + + +AE ++EEM ++ + P+ TYSSL + FC +A ++L
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG-----EAKQML 381
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI P+VV YN LI+ +C + V+K +E+ R M +RGL + +Y+ +I F
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCK---AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 122 GQ 123
Q
Sbjct: 439 FQ 440
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C +R ++ +F EM ++GL + TY++L H GF+ + + A V
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH-----GFFQARDCDNAQMVF 451
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M+ G P+++ YN L+ C G + KA+ + + + PD +Y+ +I
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNG---KLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N+++ G C R +A A+ ++M G PD T+++L H G + + +A +
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH-----GLFLHNKASEAVAL 205
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ M+ G P +V Y +++ C G + A+ +L M + + YS VI
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRG---DTDLALNLLNKMEAAKIEANVVIYSTVI 260
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 72/120 (60%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I LC R ++A +F+EM+ KG+ P+ TYSSL C +G WS+ A ++L
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG----RWSD-ASQLL 318
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
S+MI+ +P++V +N LI ++ G + VE A ++ M +R + PD +Y+++++ F
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEG--KFVE-AEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I E + EAE ++++M ++ + PD TY+SL + FC +KA ++
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC-----MHDRLDKAKQMF 388
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M+ P VV YN LI +C + VE E+ R M RGL D +Y+ +I
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCK---SKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 39/162 (24%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCD---------------- 45
N+++ G C+ R ++A+ +FE M K PD TY++L FC
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 46 --------------WGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
G + + A KV +M+ G P ++ Y+ L+ C+ G
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG---K 485
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVIS---KFGQI---WEL 127
+EKA+E+ M + + D Y+ +I K G++ W+L
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
++ GLC + E+A VF+ M++ + D Y+++ C G W +
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD-----LFCS 530
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ G P+VV YN +I CS + +++A +L+ M E G P++ +Y+ +I
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCS---KRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+IQGL + + A+ VF++M G+ PD TYS L C+ G EKA +V
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL-----EKALEVFDY 495
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M S + Y +I C G V+ ++ S+ +G+ P+ +Y+ +IS
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAG---KVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 65/151 (43%), Gaps = 37/151 (24%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+++++ G C +R +A A+ ++M G PD T+++L H G + + +A +
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH-----GLFLHNKASEAVAL 212
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEE------------------------------ 90
+ M+ G P++V Y +++ C G +
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 91 --GVEKAVEILRSMPERGLSPDAESYSNVIS 119
V+ A+ + + M +G+ P+ +YS++IS
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 72/120 (60%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I LC R ++A +F+EM+ KG+ P+ TYSSL C +G WS+ A ++L
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG----RWSD-ASQLL 243
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
S+MI+ +P++V +N LI ++ G + VE A ++ M +R + PD +Y+++I+ F
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEG--KFVE-AEKLHDDMIKRSIDPDIFTYNSLINGF 300
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I E + EAE + ++M ++ + PD TY+SL + FC +KA ++
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC-----MHDRLDKAKQMF 313
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M+ P + YN LI +C + VE E+ R M RGL D +Y+ +I
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCK---SKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Score = 52.8 bits (125), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 39/162 (24%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCD---------------- 45
N++I G C+ R ++A+ +FE M K PD TY++L FC
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 46 --------------WGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
G + + A KV +M+ G P ++ Y+ L+ C+ G
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG---K 410
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVIS---KFGQI---WEL 127
+EKA+E+ M + + D Y+ +I K G++ W+L
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
++ GLC + E+A VF+ M++ + D Y+++ C G W +
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD-----LFCS 455
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ G P+VV YN +I CS + +++A +L+ M E G PD+ +Y+ +I
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCS---KRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+IQGL + + A+ VF++M G+ PD TYS L C+ G EKA +V
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL-----EKALEVFDY 420
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M S + Y +I C G V+ ++ S+ +G+ P+ +Y+ +IS
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAG---KVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+++++ G C +R +A A+ ++M G PD T+++L H G + + +A +
Sbjct: 83 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH-----GLFLHNKASEAVAL 137
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ M+ G P++V Y +++ C G ++ A +L M + D ++ +I
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRG---DIDLAFNLLNKMEAAKIEADVVIFNTII 192
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 14/123 (11%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I LC R+ EAE +F+ M + GL P++ TYS L +FC G K D L
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG--------KLDTAL 422
Query: 62 S---EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
S EM+D+G SV YN LI+ +C +G + A + M + L P +Y++++
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFG---DISAAEGFMAEMINKKLEPTVVTYTSLM 479
Query: 119 SKF 121
+
Sbjct: 480 GGY 482
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+++ G C + + +A ++ EM KG+AP T+++L G + + A K+ +
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS-----GLFRAGLIRDAVKLFN 531
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEG-VEKAVEILRSMPERGLSPDAESYSNVI 118
EM + P+ V YN +I YC EEG + KA E L+ M E+G+ PD SY +I
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYC----EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+G C + R EEA + M G++PD TY+++ + C +KA ++
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV-----KKAIELW 845
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+ M + G P V YN LIH C G E G KA E+ M +GL P+ ++ S
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAG-EMG--KATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 27 KGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSW 86
KGL + TY+ L FC G E+A ++++ MI G SP + Y +I+ C
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRI-----EEASELITRMIGDGVSPDCITYTTMINELCR- 834
Query: 87 GWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
V+KA+E+ SM E+G+ PD +Y+ +I
Sbjct: 835 --RNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+G C E +A +EM KG+ PD +Y L H C G KV
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG------QASEAKVF 599
Query: 62 SEMIDSGFSP-SVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ + G + + Y L+H +C E +E+A+ + + M +RG+ D Y +I
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCR---EGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 71.6 bits (174), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GLC + ++A +F+EM+ KG+ P+ TYSSL C++G WS+ A ++L
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG----RWSD-ASRLL 314
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
S+MI+ +P V ++ LI ++ E + +A ++ M +R + P +YS++I+ F
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVK---EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I E + EAE +++EM ++ + P TYSSL + FC ++A ++
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC-----MHDRLDEAKQMF 384
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M+ P VV YN LI +C + + VE+ +E+ R M +RGL + +Y+ +I
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKY---KRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 122 GQ 123
Q
Sbjct: 442 FQ 443
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GL + + EA A+ + M KG PD TY + + C G ++ A +L
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD-----TDLAFNLL 244
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
++M P V+ YN +I C + + ++ A+ + + M +G+ P+ +YS++IS
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKY---KHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ GLC + E+A VFE ++R + P TY+ + C G W +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD-----LF 524
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ G P VV YN +I +C G + E+A + + M E G P++ Y+ +I
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSK---EEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +IQGL + A+ +F+EM G+ P+ TY++L C G EKA V
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL-----EKAMVVF 489
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ S P++ YN +I C G VE ++ ++ +G+ PD +Y+ +IS F
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAG---KVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+++I G C+ R +EA+ +FE M K PD TY++L FC + E+ +V
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV-----EEGMEVF 419
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM G + V YN LI G + A EI + M G+ P+ +Y+ ++
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAG---DCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+G+C + E+ +F + KG+ PD Y+++ FC G E+AD +
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS-----KEEADALF 559
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAES 113
EM + G P+ YN LI + G E + E+++ M G + DA +
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREA---SAELIKEMRSCGFAGDAST 608
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+++++ G C +R EA A+ ++M G P+ T+++L H G + + +A +
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH-----GLFLHNKASEAMAL 208
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ M+ G P +V Y +++ C G + A +L M + L P Y+ +I
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRG---DTDLAFNLLNKMEQGKLEPGVLIYNTII 263
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 70/118 (59%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I LC +R +A F+E++RKG+ P+ TY++L + C+ +S WS+ A ++L
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN----SSRWSDAA-RLL 248
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
S+MI +P+V+ Y+ L+ ++ G V +A E+ M + PD +YS++I+
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNG---KVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
EA+ +FEEM R + PD TYSSL + C ++A+++ M+ G VV
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLC-----LHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
YN LI+ +C + VE +++ R M +RGL + +Y+ +I F Q
Sbjct: 333 YNTLINGFCK---AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+++I GLC+ R +EA +F+ M KG D +Y++L + FC + E K+
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK-----AKRVEDGMKLF 353
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
EM G + V YN LI + G V+KA E M G+SPD +Y+
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAG---DVDKAQEFFSQMDFFGISPDIWTYN 404
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +IQG ++A+ F +M G++PD TY+ L CD G EKA +
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL-----EKALVIF 423
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+M +V Y +I C G VE+A + S+ +GL PD +Y+ ++S
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTG---KVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Score = 48.9 bits (115), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N VI C + A ++ +M + G PD T SL + FC + A ++
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD-----AVSLV 178
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+M++ G+ P +V YN +I S C + V A + + + +G+ P+ +Y+ +++
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCK---TKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 72/121 (59%), Gaps = 10/121 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I LC R E A +F EM+ KG+ P+ TY+SL + C++G WS+ A ++L
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG----RWSD-ASRLL 316
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEG-VEKAVEILRSMPERGLSPDAESYSNVISK 120
S M++ +P+VV +N LI ++ ++EG + +A ++ M +R + PD +Y+ +I+
Sbjct: 317 SNMLEKKINPNVVTFNALIDAF----FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 121 F 121
F
Sbjct: 373 F 373
Score = 62.8 bits (151), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I E + EAE + EEM ++ + PD TY+ L + FC ++A ++
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC-----MHNRLDEAKQMF 386
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M+ P++ YN LI+ +C + VE VE+ R M +RGL + +Y+ +I F
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKC---KRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 122 GQ 123
Q
Sbjct: 444 FQ 445
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C +R E+ +F EM ++GL + TY+++ GF+ + + A V
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ-----GFFQAGDCDSAQMVF 456
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS-- 119
+M+ + ++ Y+ L+H CS+G ++ A+ I + + + + + Y+ +I
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYG---KLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513
Query: 120 ----KFGQIWEL 127
K G+ W+L
Sbjct: 514 CKAGKVGEAWDL 525
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+++++ G C +R +A A+ ++M G PD T+++L H G + + +A +
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH-----GLFLHNKASEAVAL 210
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ +M+ G P +V Y +++ C G ++ A+ +L M + + ++ +I
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRG---DIDLALNLLNKMEAARIKANVVIFNTII 265
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 22 EEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIH 81
E+M+ G++ D TYS + FC + A VL++M+ G+ P +V + L++
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLS-----LALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 82 SYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
YC + + AV ++ M E G PD +++ +I
Sbjct: 162 GYCH---SKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+G C +R EE VF EM ++GL + TY++L H GF+ + + A V
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH-----GFFQARDCDNAQMVF 414
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS-- 119
+M+ G P ++ YN L+ C+ G VE A+ + M +R + D +Y+ +I
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNG---NVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 120 -KFGQI---WEL 127
K G++ W+L
Sbjct: 472 CKAGKVEDGWDL 483
Score = 68.2 bits (165), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 42/157 (26%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSE------ 55
N +I GLC + ++A +F +M+ KG+ PD TY+ L C++G WS+
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG----RWSDASRLLS 309
Query: 56 ----------------------------KADKVLSEMIDSGFS-PSVVEYNKLIHSYCSW 86
+A+K+ EM+ S P VV YN LI +C +
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 87 GWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
+ VE+ +E+ R M +RGL + +Y+ +I F Q
Sbjct: 370 ---KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N+++ G C R EA A+ ++M G PD T+++L H G + + +A +
Sbjct: 148 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH-----GLFQHNKASEAVAL 202
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ M+ G P +V Y +I+ C G + A+ +L M + + D Y+ +I
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEP---DLALNLLNKMEKGKIEADVVIYNTII 257
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I+ LC + E+ +F + KG+ P+ TY+++ FC G E+AD + E
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL-----KEEADALFVE 521
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
M + G P+ YN LI + G E + E+++ M G + DA ++ V
Sbjct: 522 MKEDGPLPNSGTYNTLIRARLRDGDEAA---SAELIKEMRSCGFAGDASTFGLV 572
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 70.5 bits (171), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I GLC+E + EA +F++MK + + P TY+SL H +C Y E+A + SE
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK-----EYNMEQALDLCSE 434
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M SG P+++ ++ LI YC+ ++ A+ + M +G+ PD +Y+ +I
Sbjct: 435 MTASGVEPNIITFSTLIDGYCN---VRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C EA + EM+ L+PD TY+ L + C A +A+++
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA-----EANRLF 397
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M + PS YN LIH YC E +E+A+++ M G+ P+ ++S +I +
Sbjct: 398 QKMKNERIFPSSATYNSLIHGYCK---EYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454
Query: 122 GQIWEL 127
+ ++
Sbjct: 455 CNVRDI 460
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 33/145 (22%)
Query: 5 IQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCD-------WGFYASYWSEK- 56
I LC + + EEAE +FE MK+ G+ P+ TYS++ +C +G Y +
Sbjct: 241 ILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAEL 300
Query: 57 ----------------------ADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEK 94
A + M+ G P++ YN LIH +C G + +
Sbjct: 301 LPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSG---NMLE 357
Query: 95 AVEILRSMPERGLSPDAESYSNVIS 119
AV +L M LSPD +Y+ +I+
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILIN 382
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+++ GL RR + ++ M +GL PD Y LF G Y+ K +K+L
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS-----KKEKLLD 223
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM G P+V Y I C + +E+A ++ M + G+ P+ +YS +I +
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCR---DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I G C E E+A + EM G+ P+ T+S+L +C+ + A +
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA-----AMGLY 467
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM G P VV Y LI ++ E +++A+ + M E G+ P+ +++ ++ F
Sbjct: 468 FEMTIKGIVPDVVTYTALIDAHFK---EANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
++ G C R A ++F M + G+ P+ Y+ L H C G +A +LSE
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNML-----EAVGLLSE 364
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M SP V Y LI+ C E+ V +A + + M + P + +Y+++I +
Sbjct: 365 MESLNLSPDVFTYTILINGLCI---EDQVAEANRLFQKMKNERIFPSSATYNSLIHGY 419
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 70.1 bits (170), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I LC + +A +F EM KG+ P+ TY+SL C++G WS+ A ++L
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG----RWSD-ASRLL 314
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
S+MI+ +P+VV ++ LI ++ E + +A ++ M +R + PD +YS++I+ F
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVK---EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Score = 65.1 bits (157), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I E + EAE +++EM ++ + PD TYSSL + FC ++A +
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC-----MHDRLDEAKHMF 384
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI P+VV YN LI +C + V++ +E+ R M +RGL + +Y+ +I F
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCK---AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 122 GQIWE 126
Q E
Sbjct: 442 FQARE 446
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+G C +R +E +F EM ++GL + TY++L H GF+ + + A V
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH-----GFFQARECDNAQIVF 454
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS-- 119
+M+ G P ++ Y+ L+ C+ G VE A+ + + + PD +Y+ +I
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNG---KVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 120 -KFGQI---WEL 127
K G++ W+L
Sbjct: 512 CKAGKVEDGWDL 523
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
++ GLC + E A VFE ++R + PD TY+ + C G W +
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD-----LFCS 526
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ G P+VV Y ++ +C G +E +A + R M E G PD+ +Y+ +I
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKE---EADALFREMKEEGPLPDSGTYNTLI 578
Score = 53.1 bits (126), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GL R EA A+ + M KG PD TY + + C G + A +L
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI-----DLALSLL 244
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M P VV YN +I + C++ + V A+ + M +G+ P+ +Y+++I
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNY---KNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N+++ G C R +A ++ +M G PD T+++L H G + + +A +
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH-----GLFRHNRASEAVAL 208
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ M+ G P +V Y +++ C G ++ A+ +L+ M + + P Y+ +I
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRG---DIDLALSLLKKMEQGKIEPGVVIYNTII 263
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+G+C + E+ +F + KG+ P+ TY+++ FC G E+AD +
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL-----KEEADALF 559
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRS 101
EM + G P YN LI ++ G + + + +RS
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 70.1 bits (170), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 9/116 (7%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I LC +K EA +F++M G+ PD+ Y+ L FC + ++A +L
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFC-----SGDTLDEASGLLEH 320
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M+++G P+V+ YN LI +C ++ V KA+ +L M E+ L PD +Y+ +I+
Sbjct: 321 MLENGLMPNVITYNALIKGFC----KKNVHKAMGLLSKMLEQNLVPDLITYNTLIA 372
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+IQ C +EA + E M GL P+ TY++L FC + KA +LS+
Sbjct: 301 LIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVH------KAMGLLSK 354
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAES 113
M++ P ++ YN LI CS G ++ A +L M E GL P+ +
Sbjct: 355 MLEQNLVPDLITYNTLIAGQCSSG---NLDSAYRLLSLMEESGLVPNQRT 401
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I GL ++ +EA ++ +MK P+ +TY+ L C G +A + +
Sbjct: 231 LIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSG-----QKSEAMNLFKQ 285
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M +SG P Y LI S+CS + +++A +L M E GL P+ +Y+ +I F
Sbjct: 286 MSESGIKPDDCMYTVLIQSFCS---GDTLDEASGLLEHMLENGLMPNVITYNALIKGF 340
Score = 52.8 bits (125), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+ I G C + + A VF+EM + G +E +Y+ L +G + + ++A +L
Sbjct: 195 SFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLI-----YGLFEAKKIDEALSLLV 249
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M D P+V Y LI + C G + +A+ + + M E G+ PD Y+ +I F
Sbjct: 250 KMKDDNCCPNVRTYTVLIDALCGSGQK---SEAMNLFKQMSESGIKPDDCMYTVLIQSF 305
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 33/148 (22%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYAS---YWSEKADKV 60
+I+GLC+ +++ EA +F+ +K KG APD Y+++ FC+ G+ S W E K
Sbjct: 289 IIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKG 348
Query: 61 L---------------------------SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVE 93
+ +EM+ +G+ +++ N +I +CS G +
Sbjct: 349 MRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS---D 405
Query: 94 KAVEILRSMPERGLSPDAESYSNVISKF 121
+A EI ++M E G++P+A +Y+ +I F
Sbjct: 406 EAFEIFKNMSETGVTPNAITYNALIKGF 433
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G EA + EM R G + +++ FC G S++A ++
Sbjct: 357 NVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHG-----KSDEAFEIF 411
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M ++G +P+ + YN LI +C E VEK +++ + + GL P +Y+ ++
Sbjct: 412 KNMSETGVTPNAITYNALIKGFCK---ENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+ +I+ LC E + ++ ++GL P + Y+ L FC+ G YA +V
Sbjct: 216 IRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYAC-----MSEV 270
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
L MI PS+ Y K+I C + +A I +++ ++G +PD Y+ +I
Sbjct: 271 LHTMIAWNHFPSMYIYQKIIKGLC---MNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRG 327
Query: 121 F 121
F
Sbjct: 328 F 328
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 69.7 bits (169), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++IQGLC+ R A +FEEM+ KG PDE TY+ L C G ++A +L
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL-----DEALNML 458
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M SG + SV+ YN LI +C +A EI M G+S ++ +Y+ +I
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCK---ANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Score = 68.9 bits (167), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GLC RR E+A + ++M +G PD+ TY+SL FC G +KA ++
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI-----KKAADIV 563
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M +G P +V Y LI C G VE A ++LRS+ +G++ +Y+ VI
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAG---RVEVASKLLRSIQMKGINLTPHAYNPVI 617
Score = 68.2 bits (165), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C + EAE +F+EM+ G++ + TY++L C S E A +++
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK-----SRRVEDAAQLM 528
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+MI G P YN L+ +C G ++KA +I+++M G PD +Y +IS
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGG---DIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRK-GLAPDEKTYSSLFHLFCDWGFYASYWSEKADK 59
+N ++ G C E R E+A +EM + G PD+ T+++L + C G + A +
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV-----KHAIE 316
Query: 60 VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
++ M+ G+ P V YN +I C G V++AVE+L M R SP+ +Y+ +IS
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLG---EVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Score = 62.8 bits (151), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ GLC + A + + M ++G PD TY+S+ C G ++A +VL
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV-----KEAVEVL 353
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+MI SP+ V YN LI + C E VE+A E+ R + +G+ PD +++++I
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCK---ENQVEEATELARVLTSKGILPDVCTFNSLI 407
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 37/159 (23%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLF------------------ 43
N +I+ LC + A + E+M GL PDEKT++++ +
Sbjct: 193 NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252
Query: 44 --CDW----------GFYASYWSEKADKVLSEMIDS-GFSPSVVEYNKLIHSYCSWGWEE 90
C W GF E A + EM + GF P +N L++ C G
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG--- 309
Query: 91 GVEKAVEILRSMPERGLSPDAESYSNVIS---KFGQIWE 126
V+ A+EI+ M + G PD +Y++VIS K G++ E
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Score = 52.8 bits (125), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I LC E + EEA + + KG+ PD T++SL C + A ++
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC-----LTRNHRVAMELF 423
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM G P YN LI S CS G +++A+ +L+ M G + +Y+ +I F
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKG---KLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+VI GLC +EA V ++M + +P+ TY++L C E+A ++
Sbjct: 334 NSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK-----ENQVEEATELA 388
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ G P V +N LI C A+E+ M +G PD +Y+ +I
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLC---LTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I L R E + EEM KG PD TY+ L + FC SE A++VL
Sbjct: 262 STLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFC-----VENDSESANRVL 316
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSW-GWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
EM++ G P V+ YN ++ + WEE A + MP RG SPD SY V
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFRIKKWEE----ATYLFEDMPRRGCSPDTLSYRIV 369
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 67/157 (42%), Gaps = 36/157 (22%)
Query: 3 AVIQGLCVERRKEEAEAVFEEM-KRKGLAPDEKTYSSLFHLFC----------------- 44
+I GLC + R +EA + +M K G+ P Y+SL C
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE 251
Query: 45 -----DWGFYASYWSE--KADK------VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
D Y++ S KA + +L EM + G P V YN LI+ +C E
Sbjct: 252 GKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFC---VEND 308
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVISKFGQI--WE 126
E A +L M E+GL PD SY+ ++ F +I WE
Sbjct: 309 SESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWE 345
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G CVE E A V +EM KGL PD +Y+ + +F F W E+A +
Sbjct: 297 NVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVF----FRIKKW-EEATYLF 351
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGV--EKAVEILRSMPERGLSPDAESYSNVIS 119
+M G SP + Y + C EG+ E+A IL M +G P + +
Sbjct: 352 EDMPRRGCSPDTLSYRIVFDGLC-----EGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQ 406
Query: 120 KFGQIWEL 127
K + +L
Sbjct: 407 KLCESGKL 414
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 69.3 bits (168), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 8/123 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++GLC E + EEA + EMKR+G+ PD +Y++L G+ ++ A V
Sbjct: 506 NCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS-----GYSKKGDTKHAFMVR 560
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM+ GF+P+++ YN L+ +EG E A E+LR M G+ P+ S+ +VI
Sbjct: 561 DEMLSLGFNPTLLTYNALLKGLSK--NQEG-ELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Query: 122 GQI 124
+
Sbjct: 618 SNL 620
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++QG + R E A + EMK KG PD +TY+ + C+ G +A +VL
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG--------RASEVL 315
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM + G P V YN LI + G +E A M ++G+ P +Y+ +I
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNG---DLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Score = 59.7 bits (143), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I LC E + ++A+ M+ G+ P TY++L GF E A ++
Sbjct: 229 NIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQ-----GFSLRGRIEGARLII 283
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
SEM GF P + YN ++ SW EG +A E+LR M E GL PD+ SY+ +I
Sbjct: 284 SEMKSKGFQPDMQTYNPIL----SWMCNEG--RASEVLREMKEIGLVPDSVSYNILI 334
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I LC + + EA+ +FE++ KG+ PD ++L C G ++A +L
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNM-----DRAFSLLK 491
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
EM +P V YN L+ C E E+A E++ M RG+ PD SY+ +IS +
Sbjct: 492 EMDMMSINPDDVTYNCLMRGLCG---EGKFEEARELMGEMKRRGIKPDHISYNTLISGYS 548
Query: 123 Q 123
+
Sbjct: 549 K 549
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GL +E + E AE + E++ KG+ D TY+ L + +C G ++KA +
Sbjct: 366 NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD-----AKKAFALH 420
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPD 110
EM+ G P+ Y LI+ C + +A E+ + +G+ PD
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCR---KNKTREADELFEKVVGKGMKPD 466
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+G E A A +EM ++G+ P TY++L H G + E A+ ++
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH-----GLFMENKIEAAEILI 385
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
E+ + G V YN LI+ YC G +KA + M G+ P +Y+++I
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHG---DAKKAFALHDEMMTDGIQPTQFTYTSLI 439
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 69.3 bits (168), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+++ GLC EEA + E + GL D TY++L +C G +KA ++L
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM-----DKAQEIL 549
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM+ G P++V +N L++ +C G E EK +L M +G++P+A ++++++ ++
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK---LLNWMLAKGIAPNATTFNSLVKQY 606
Score = 65.9 bits (159), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ V+ G C ++ + E MKRKGL P+ Y S+ L C A +A++
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA-----EAEEAF 339
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
SEMI G P V Y LI +C G + A + M R ++PD +Y+ +IS F
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRG---DIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 122 GQIWEL 127
QI ++
Sbjct: 397 CQIGDM 402
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A+I G C EA +F EM KGL PD T++ L + +C G + A +V +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM-----KDAFRVHN 445
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS--- 119
MI +G SP+VV Y LI C E ++ A E+L M + GL P+ +Y+++++
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCK---EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 120 KFGQIWE 126
K G I E
Sbjct: 503 KSGNIEE 509
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I LC + EAE F EM R+G+ PD Y++L FC G + A K
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA-----ASKFFY 375
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM +P V+ Y +I +C G + +A ++ M +GL PD+ +++ +I+ +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIG---DMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++++ C+ + A A++++M +G+ PD KTY +L C W +
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF-----LF 654
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
EM GFS SV Y+ LI + + +A E+ M GL+ D E +
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLK---RKKFLEAREVFDQMRREGLAADKEIF 704
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 20 VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKL 79
VF E G+ + +Y+ + H C G ++A +L M G++P V+ Y+ +
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRI-----KEAHHLLLLMELKGYTPDVISYSTV 287
Query: 80 IHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQIWEL 127
++ YC +G + V K +E+ M +GL P++ Y ++I +I +L
Sbjct: 288 VNGYCRFGELDKVWKLIEV---MKRKGLKPNSYIYGSIIGLLCRICKL 332
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ G C+ E+ E + M KG+AP+ T++SL +C + A +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA-----ATAIY 619
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M G P Y L+ +C +++A + + M +G S +YS +I F
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCK---ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 69.3 bits (168), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+++ GLC EEA + E + GL D TY++L +C G +KA ++L
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM-----DKAQEIL 549
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM+ G P++V +N L++ +C G E EK +L M +G++P+A ++++++ ++
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK---LLNWMLAKGIAPNATTFNSLVKQY 606
Score = 65.9 bits (159), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ V+ G C ++ + E MKRKGL P+ Y S+ L C A +A++
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA-----EAEEAF 339
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
SEMI G P V Y LI +C G + A + M R ++PD +Y+ +IS F
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRG---DIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 122 GQIWEL 127
QI ++
Sbjct: 397 CQIGDM 402
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A+I G C EA +F EM KGL PD T++ L + +C G + A +V +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM-----KDAFRVHN 445
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS--- 119
MI +G SP+VV Y LI C E ++ A E+L M + GL P+ +Y+++++
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCK---EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 120 KFGQIWE 126
K G I E
Sbjct: 503 KSGNIEE 509
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I LC + EAE F EM R+G+ PD Y++L FC G + A K
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA-----ASKFFY 375
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM +P V+ Y +I +C G + +A ++ M +GL PD+ +++ +I+ +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIG---DMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++++ C+ + A A++++M +G+ PD KTY +L C W +
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF-----LF 654
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
EM GFS SV Y+ LI + + +A E+ M GL+ D E +
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLK---RKKFLEAREVFDQMRREGLAADKEIF 704
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 20 VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKL 79
VF E G+ + +Y+ + H C G ++A +L M G++P V+ Y+ +
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRI-----KEAHHLLLLMELKGYTPDVISYSTV 287
Query: 80 IHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQIWEL 127
++ YC +G + V K +E+ M +GL P++ Y ++I +I +L
Sbjct: 288 VNGYCRFGELDKVWKLIEV---MKRKGLKPNSYIYGSIIGLLCRICKL 332
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ G C+ E+ E + M KG+AP+ T++SL +C + A +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA-----ATAIY 619
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M G P Y L+ +C +++A + + M +G S +YS +I F
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCK---ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 68.9 bits (167), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+G+C E + A + ++ KG PD +Y+ L + G + E+ +K++
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW-----EEGEKLM 321
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
++M P+VV Y+ LI + C G +E+A+ +L+ M E+GL+PDA SY +I+ F
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDG---KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Score = 65.5 bits (158), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I G C R ++A V + M+ K +PD TY+ + C G + A KVL
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL-----DLALKVL 216
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++++ P+V+ Y LI + E GV++A++++ M RGL PD +Y+ +I
Sbjct: 217 NQLLSDNCQPTVITYTILIEATM---LEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I LC + + EEA + + MK KGL PD +Y L FC G + A + L
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL-----DVAIEFLET 393
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
MI G P +V YN ++ + C G ++A+EI + E G SP++ SY+ + F
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNG---KADQALEIFGKLGEVGCSPNSSSYNTM---FSA 447
Query: 124 IW 125
+W
Sbjct: 448 LW 449
Score = 55.8 bits (133), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N + L K A + EM G+ PDE TY+S+ C G ++A ++L
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV-----DEAFELL 496
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M F PSVV YN ++ +C +E A+ +L SM G P+ +Y+ +I
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCK---AHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Query: 122 G 122
G
Sbjct: 554 G 554
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I LC + A+ +F EM KG+ PD TYS + FC G W++ A+++L
Sbjct: 80 NAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSG----RWTD-AEQLL 134
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+MI+ +P VV ++ LI++ G V +A EI M RG+ P +Y+++I F
Sbjct: 135 RDMIERQINPDVVTFSALINALVKEGK---VSEAEEIYGDMLRRGIFPTTITYNSMIDGF 191
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I L E + EAE ++ +M R+G+ P TY+S+ FC A ++L
Sbjct: 150 SALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL-----NDAKRML 204
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M SP VV ++ LI+ YC + V+ +EI M RG+ + +Y+ +I F
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKA---KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 261
Query: 122 GQIWEL 127
Q+ +L
Sbjct: 262 CQVGDL 267
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I G C +R + +F EM R+G+ + TY++L H FC G + A +L
Sbjct: 220 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL-----DAAQDLL 274
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSM 102
+ MI SG +P+ + + ++ S CS ++ + KA IL +
Sbjct: 275 NVMISSGVAPNYITFQSMLASLCS---KKELRKAFAILEDL 312
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 68.6 bits (166), Expect = 9e-13, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I GLC + + A +F EM+ KG D Y++L FC YA W + A K+L +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC----YAGRWDDGA-KLLRD 307
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI +P VV ++ LI + E + +A E+ + M +RG+SPD +Y+++I F
Sbjct: 308 MIKRKITPDVVAFSALIDCFVK---EGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Score = 67.0 bits (162), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I E + EAE + +EM ++G++PD TY+SL FC +KA+ +L
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK-----ENQLDKANHML 375
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M+ G P++ +N LI+ YC ++ +E+ R M RG+ D +Y+ +I F
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANL---IDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 122 GQIWEL 127
++ +L
Sbjct: 433 CELGKL 438
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +IQG C + E A+ +F+EM + + PD +Y L CD G EKA ++
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG-----EPEKALEIF 480
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++ S + YN +IH C+ V+ A ++ S+P +G+ PD ++Y+ +I
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCN---ASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 35/152 (23%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWG------------- 47
+NA++ GLC+ + +A + + M G P+E TY + + C G
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 48 -----FYASYWS------------EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWG-WE 89
A +S + A + +EM GF ++ Y LI +C G W+
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 90 EGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+G ++LR M +R ++PD ++S +I F
Sbjct: 300 DG----AKLLRDMIKRKITPDVVAFSALIDCF 327
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G+C + ++A +F + KG+ PD KTY+ + C G + +AD +
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS-----EADLLF 550
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M + G SP+ YN LI ++ E K+ +++ + G S DA + V+
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLG---EGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
+AE+VF MK +GL D TY++L H G+ ++ K +++ EM +G SP V
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMH-----GYGKTHQLNKVFELIDEMRSAGISPDVAT 515
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
YN LIHS G+ +++A EI+ + RG P ++++VI F +
Sbjct: 516 YNILIHSMVVRGY---IDEANEIISELIRRGFVPSTLAFTDVIGGFSK 560
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
VI G +EA ++ M + PD T S+L H +C + EKA + ++
Sbjct: 554 VIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCK-----AQRMEKAIVLFNK 608
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++D+G P VV YN LIH YCS G +EKA E++ M +RG+ P+ ++ ++
Sbjct: 609 LLDAGLKPDVVLYNTLIHGYCSVG---DIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
++ + +C A +F+E+ GL PD Y+++ +C+ G ++KA +
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLG-----RTDKAFQYF 431
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
++ SG PS+ LI + +G + A + R+M GL D +Y+N++ +
Sbjct: 432 GALLKSGNPPSLTTSTILIGACSRFG---SISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 122 GQIWEL 127
G+ +L
Sbjct: 489 GKTHQL 494
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 43/161 (26%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ G + + + +EM+ G++PD TY+ L H G+ ++A++++
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI-----DEANEII 536
Query: 62 SEMIDSGFSPS-----------------------------------VVEYNKLIHSYCSW 86
SE+I GF PS VV + L+H YC
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCK- 595
Query: 87 GWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQIWEL 127
+ +EKA+ + + + GL PD Y+ +I + + ++
Sbjct: 596 --AQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDI 634
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
+AE+VF MK +GL D TY++L H G+ ++ K +++ EM +G SP V
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMH-----GYGKTHQLNKVFELIDEMRSAGISPDVAT 515
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
YN LIHS G+ +++A EI+ + RG P ++++VI F +
Sbjct: 516 YNILIHSMVVRGY---IDEANEIISELIRRGFVPSTLAFTDVIGGFSK 560
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
VI G +EA ++ M + PD T S+L H +C + EKA + ++
Sbjct: 554 VIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCK-----AQRMEKAIVLFNK 608
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++D+G P VV YN LIH YCS G +EKA E++ M +RG+ P+ ++ ++
Sbjct: 609 LLDAGLKPDVVLYNTLIHGYCSVG---DIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
++ + +C A +F+E+ GL PD Y+++ +C+ G ++KA +
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLG-----RTDKAFQYF 431
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
++ SG PS+ LI + +G + A + R+M GL D +Y+N++ +
Sbjct: 432 GALLKSGNPPSLTTSTILIGACSRFG---SISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 122 GQIWEL 127
G+ +L
Sbjct: 489 GKTHQL 494
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 43/161 (26%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ G + + + +EM+ G++PD TY+ L H G+ ++A++++
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI-----DEANEII 536
Query: 62 SEMIDSGFSPS-----------------------------------VVEYNKLIHSYCSW 86
SE+I GF PS VV + L+H YC
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCK- 595
Query: 87 GWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQIWEL 127
+ +EKA+ + + + GL PD Y+ +I + + ++
Sbjct: 596 --AQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDI 634
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 68.2 bits (165), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I G E A V +M+ KG P+ +Y+ L FC G ++A VL
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI-----DEAYNVL 447
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+EM G P+ V +N LI ++C E + +AVEI R MP +G PD +++++IS
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCK---EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 122 GQIWEL 127
++ E+
Sbjct: 505 CEVDEI 510
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/151 (31%), Positives = 65/151 (43%), Gaps = 32/151 (21%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCD---------------- 45
N VI GLC R EA + M +G APD+ TY L + C
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 46 ----------WGFYASYWSEKADKVLSEMIDS-GFSPSVVEYNKLIHSYCSWGWEEG-VE 93
GF + A VLS+M+ S G P V YN LI+ Y W+EG V
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY----WKEGLVG 406
Query: 94 KAVEILRSMPERGLSPDAESYSNVISKFGQI 124
A+E+L M +G P+ SY+ ++ F ++
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKL 437
Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I+GLC ++A ++FE+M R G AP + + L + C G E+A +
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV-----EEAVEFQ 622
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
EM+ G +P +V +N LI+ C G +E + + R + G+ PD +++ ++S
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAG---RIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWG-FYASYWSEKADKV 60
N +I C E R EA +F EM RKG PD T++SL C+ + W +
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW------L 516
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
L +MI G + V YN LI+++ G +++A +++ M +G D +Y+++I
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRG---EIKEARKLVNEMVFQGSPLDEITYNSLI 571
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I GLC + + A +F EM+ KG D TY++L FC+ A W + A K+L +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN----AGRWDDGA-KLLRD 323
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI SP+VV ++ LI S+ E + +A ++L+ M +RG++P+ +Y+++I F
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVK---EGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C R ++ + +M ++ ++P+ T+S L F G +AD++L
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL-----READQLL 356
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM+ G +P+ + YN LI +C E +E+A++++ M +G PD +++ +I+ +
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCK---ENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 35/152 (23%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWG------------- 47
+N ++ GLC+ + +A + + M G P+E TY + ++ C G
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 48 -----FYASYWS------------EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWG-WE 89
A +S + A + +EM GF ++ YN LI +C+ G W+
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 90 EGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+G ++LR M +R +SP+ ++S +I F
Sbjct: 316 DG----AKLLRDMIKRKISPNVVTFSVLIDSF 343
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++QG C + E A+ +F+EM + + PD +Y L CD G EKA ++
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL-----EKALEIF 496
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
++ S + Y +IH C+ V+ A ++ S+P +G+ DA +Y+ +IS+
Sbjct: 497 GKIEKSKMELDIGIYMIIIHGMCN---ASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL 553
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 20/119 (16%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV- 60
N++I G C E R EEA + + M KG PD T++ L + +C KA+++
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC-----------KANRID 420
Query: 61 -----LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
EM G + V YN L+ +C G +E A ++ + M R + PD SY
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSG---KLEVAKKLFQEMVSRRVRPDIVSY 476
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C R+ ++A A+ + MK PD TY+S +C G + + +++L
Sbjct: 277 NILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDF-----RRVNEML 331
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI--- 118
EM ++G +P+VV Y ++H S G + V +A+ + M E G PDA+ YS++I
Sbjct: 332 EEMRENGCNPNVVTYTIVMH---SLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 119 SKFGQ 123
SK G+
Sbjct: 389 SKTGR 393
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
MN+++ L E E A VF ++ + PD +T++ L H FC + + A +
Sbjct: 242 MNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFCKARKF-----DDARAM 295
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
+ M + F+P VV Y + +YC G + E+L M E G +P+ +Y+ V+
Sbjct: 296 MDLMKVTEFTPDVVTYTSFVEAYCKEG---DFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 121 FGQ 123
G+
Sbjct: 353 LGK 355
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
V+ L ++ EA V+E+MK G PD K YSSL H+ G + + A ++ +
Sbjct: 349 VMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF-----KDAAEIFED 403
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPE---RGLSPDAESYSNVI 118
M + G V+ YN +I + + E A+ +L+ M + SP+ E+Y+ ++
Sbjct: 404 MTNQGVRRDVLVYNTMISAALHHSRD---EMALRLLKRMEDEEGESCSPNVETYAPLL 458
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 67.8 bits (164), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I LC + +A +F EM KG+ P+ TY+SL C++G WS+ A ++LS+
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG----RWSD-ASRLLSD 315
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI+ +P+VV ++ LI ++ E + +A ++ M +R + PD +YS++I+ F
Sbjct: 316 MIERKINPNVVTFSALIDAFVK---EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I E + EAE +++EM ++ + PD TYSSL + FC ++A +
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC-----MHDRLDEAKHMF 383
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI P+VV YN LI +C + VE+ +E+ R M +RGL + +Y+ +I
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCK---AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 122 GQ 123
Q
Sbjct: 441 FQ 442
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +IQGL + A+ +F++M G+ PD TYS L C +G EKA V
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL-----EKALVVF 488
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ S P + YN +I C G VE ++ S+ +G+ P+ Y+ +IS F
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAG---KVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 35/151 (23%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWG-------------- 47
N +I GL + + EA A+ + M +G PD TY ++ + C G
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 48 --------FYASYWS--------EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWG-WEE 90
Y + A + +EM + G P+VV YN LI C++G W +
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 91 GVEKAVEILRSMPERGLSPDAESYSNVISKF 121
A +L M ER ++P+ ++S +I F
Sbjct: 309 ----ASRLLSDMIERKINPNVVTFSALIDAF 335
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+G+C + E+ +F + KG+ P+ Y+++ FC G E+AD +
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL-----KEEADALF 558
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
EM + G P+ YN LI + G + + E+++ M G DA + S VI+
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAA---SAELIKEMRSCGFVGDASTISMVIN 613
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I E + EAE + +EM +G+APD TY+SL FC +KA++++
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL-----DKANQMV 391
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M+ G P++ +N LI+ YC ++ +E+ R M RG+ D +Y+ +I F
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCK---ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 122 GQIWEL 127
++ +L
Sbjct: 449 CELGKL 454
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I GLC + A +F EM+ KG+ + TY+ L FC+ A W + A K+L +
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN----AGRWDDGA-KLLRD 323
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI +P+VV ++ LI S+ E + +A E+ + M RG++PD +Y+++I F
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVK---EGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Score = 55.5 bits (132), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I GLC+E R EA + + M G PD T ++L + C G A +A ++
Sbjct: 162 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA-----EAMLLI 216
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M++ G P+ V Y +++ C G A+E+LR M ER + DA YS +I
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSG---QTALAMELLRKMEERNIKLDAVKYSIII 270
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +IQG C + A+ +F+EM + + P+ TY L CD G SEKA ++
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG-----ESEKALEIF 496
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++ S + YN +IH C+ V+ A ++ S+P +G+ P ++Y+ +I
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCN---ASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 35/152 (23%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWG------------- 47
+N ++ GLC+ ++ EA + ++M G P+ TY + ++ C G
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 48 -----FYASYWS------------EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWG-WE 89
A +S + A + +EM G + +++ YN LI +C+ G W+
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 90 EGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+G ++LR M +R ++P+ ++S +I F
Sbjct: 316 DG----AKLLRDMIKRKINPNVVTFSVLIDSF 343
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C R ++ + +M ++ + P+ T+S L F G +A+++
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL-----REAEELH 356
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EMI G +P + Y LI +C E ++KA +++ M +G P+ +++ +I+ +
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCK---ENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A+I ER+ EAE +++EM R + P TY+S+ FC + A ++L
Sbjct: 85 ALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD-----RVDDAKRMLD 139
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
M G SP VV ++ LI+ YC + V+ +EI M RG+ + +Y+ +I F
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCK---AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 196
Query: 123 QIWEL 127
Q+ +L
Sbjct: 197 QVGDL 201
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I G C + R ++A+ + + M KG +PD T+S+L + G+ + + ++
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLIN-----GYCKAKRVDNGMEIF 173
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM G + V Y LIH +C G ++ A ++L M G++PD ++ +++
Sbjct: 174 CEMHRRGIVANTVTYTTLIHGFCQVG---DLDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
Query: 122 GQIWEL 127
EL
Sbjct: 231 CSKKEL 236
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
A++ LC + A+ +F EM KG+ P+ TY+ + FC G WS+ AD++L
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSG----RWSD-ADQLL 68
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI+ +P +V ++ LI+++ E V +A EI + M + P +Y+++I F
Sbjct: 69 RHMIEKQINPDIVTFSALINAFVK---ERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I C R +A+ + M K + PD T+S+L + F +A+++
Sbjct: 49 NCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN-----AFVKERKVSEAEEIY 103
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM+ P+ + YN +I +C ++ V+ A +L SM +G SPD ++S +I+ +
Sbjct: 104 KEMLRWSIFPTTITYNSMIDGFCK---QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGY 160
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+I G C +R + +F EM R+G+ + TY++L H FC G + A +L+
Sbjct: 155 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL-----DAAQDLLN 209
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSM 102
EMI G +P + ++ ++ CS ++ + KA IL +
Sbjct: 210 EMISCGVAPDYITFHCMLAGLCS---KKELRKAFAILEDL 246
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 2 NAVIQGLC-VERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+IQ LC E+R +EA VF EM+R G D TY++L FC WG +S V
Sbjct: 310 TVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYS-----V 364
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS- 119
L +M G PS V Y +++ ++ +E E+ +E++ M RG PD Y+ VI
Sbjct: 365 LDDMRKKGVMPSQVTYMQIMVAH---EKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRL 421
Query: 120 --KFGQIWE 126
K G++ E
Sbjct: 422 ACKLGEVKE 430
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+++ G C E + EA+ V +MK GL PD +++L + G A + ++
Sbjct: 240 TSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYD-----LM 294
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
++M GF P+V Y LI + C E+ +++A+ + M G D +Y+ +IS F
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCR--TEKRMDEAMRVFVEMERYGCEADIVTYTALISGF 352
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
++ LC +EA VFE+M+ K P+ + ++SL + +C G +A +VL +
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLM-----EAKEVLVQ 261
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M ++G P +V + L+ Y G + A +++ M +RG P+ Y+ +I
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAG---KMADAYDLMNDMRKRGFEPNVNCYTVLIQ 314
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
++A V +EM + GL PDE + L C G ++A KV +M + F P++
Sbjct: 184 KKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSV-----KEASKVFEDMREK-FPPNLR 237
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
+ L++ +C G + +A E+L M E GL PD ++N++S +
Sbjct: 238 YFTSLLYGWCREG---KLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH 283
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 67.0 bits (162), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++G C + EA V+++MK +G+ PD+ TY++L +G + E+A L
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI-----FGLSKAGRVEEARMYL 323
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M+D+G+ P Y L++ C G G A+ +L M RG +P+ +Y+ ++
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRKGESLG---ALSLLEEMEARGCAPNDCTYNTLL 377
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GL R EEA + M G PD TY+SL + C G S A +L
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG-----ESLGALSLL 358
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS-- 119
EM G +P+ YN L+H C ++K +E+ M G+ ++ Y+ ++
Sbjct: 359 EEMEARGCAPNDCTYNTLLHGLCK---ARLMDKGMELYEMMKSSGVKLESNGYATLVRSL 415
Query: 120 -KFGQIWE 126
K G++ E
Sbjct: 416 VKSGKVAE 423
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 67.0 bits (162), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 8/121 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
AVI E + EA ++EEM R+ + PD TY+SL + C G ++A ++L
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV-----DEAKQMLD 303
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
M+ G P VV YN LI+ +C + V++ ++ R M +RGL D +Y+ +I +
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCK---SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 123 Q 123
Q
Sbjct: 361 Q 361
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 30/147 (20%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCD---------------- 45
N +I G C +R +E +F EM ++GL D TY+++ +
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377
Query: 46 -----------WGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEK 94
+G ++ EKA + M S + YN +IH C G VE
Sbjct: 378 RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG---NVED 434
Query: 95 AVEILRSMPERGLSPDAESYSNVISKF 121
A ++ RS+ +GL PD SY+ +IS F
Sbjct: 435 AWDLFRSLSCKGLKPDVVSYTTMISGF 461
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I GLC+ R +EA+ + + M KG PD TY++L + FC S ++ K+
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK-----SKRVDEGTKLF 337
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM G + YN +I Y G + A EI M R P+ +YS ++
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDA---AQEIFSRMDSR---PNIRTYSILLYGL 391
Query: 122 GQIWEL 127
W +
Sbjct: 392 CMNWRV 397
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N VI LC R A +V +M + G PD T SSL + FC A ++
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-----AIDLV 162
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
S+M + GF P VV YN +I C G V AVE+ M G+ DA +Y+++++
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGL---VNDAVELFDRMERDGVRADAVTYNSLVA 217
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
++ GLC+ R E+A +FE M++ + D TY+ + H C G W +
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD-----LFRS 441
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSP 109
+ G P VV Y +I +C + +K+ + R M E GL P
Sbjct: 442 LSCKGLKPDVVSYTTMISGFCR---KRQWDKSDLLYRKMQEDGLLP 484
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C +A +F+ M+R G+ D TY+SL C G WS+ A +++
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG----RWSDAA-RLM 232
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+M+ P+V+ + +I + E +A+++ M R + PD +Y+++I+
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVK---EGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
VI GLC E + E VFE M RKG P+ Y+ L G+ S E A ++L
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID-----GYAKSGSVEDAIRLLHR 387
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
MID GF P VV Y+ +++ C G VE+A++ + GL+ ++ YS++I G+
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGR---VEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 444
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I+ EE V+ +MK G+ P TY+ L + G ++ + + A++V
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMN-----GLVSAMFVDSAERVF 245
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M P +V YN +I YC G +KA+E LR M RG D +Y +I
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQ---TQKAMEKLRDMETRGHEADKITYMTMI 299
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 65/158 (41%), Gaps = 36/158 (22%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLF------------------ 43
+++I GL R +EAE +FEEM KG D Y++L F
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
Query: 44 ---CDW----------GFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEE 90
CD G + + +E+A K+ MID G +P+ + L C G
Sbjct: 496 EEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSG--- 552
Query: 91 GVEKAVEILRSMPERGLSPDA--ESYSNVISKFGQIWE 126
V +A +IL + G+ DA E N + K G+I E
Sbjct: 553 KVARACKILDELAPMGVILDAACEDMINTLCKAGRIKE 590
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 67.0 bits (162), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV- 60
N +I +C E E A +FEEMK +GL PD TY+S+ F G D V
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG-------RLDDTVC 318
Query: 61 -LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
EM D P V+ YN LI+ +C +G + +E R M GL P+ SYS ++
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFG---KLPIGLEFYREMKGNGLKPNVVSYSTLVD 375
Query: 120 KF 121
F
Sbjct: 376 AF 377
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
EEA F +MKR + P ++ + L H F G ++ + +MI +G P+V
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLG-----KTDDVKRFFKDMIGAGARPTVF 263
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQIWEL 127
YN +I C E VE A + M RGL PD +Y+++I FG++ L
Sbjct: 264 TYNIMIDCMCK---EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Score = 58.9 bits (141), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A+I GLC R +EAE +F +M G+ P+ +Y++L H GF + ++A ++L+
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH-----GFVKAKNMDRALELLN 496
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
E+ G P ++ Y I CS E +E A ++ M E G+ ++ Y+ ++ +
Sbjct: 497 ELKGRGIKPDLLLYGTFIWGLCSL---EKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 22/124 (17%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWG-------FYASYWS 54
N++I G R ++ FEEMK PD TY++L + FC +G FY
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY----- 355
Query: 55 EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
EM +G P+VV Y+ L+ ++C G +++A++ M GL P+ +Y
Sbjct: 356 -------REMKGNGLKPNVVSYSTLVDAFCKEGM---MQQAIKFYVDMRRVGLVPNEYTY 405
Query: 115 SNVI 118
+++I
Sbjct: 406 TSLI 409
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ ++ C E ++A + +M+R GL P+E TY+SL C G + A ++
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD-----AFRLG 425
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+EM+ G +VV Y LI C E +++A E+ M G+ P+ SY+ +I F
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCD---AERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A+I GLC + + E A +FE+M +KGL PD Y+SL D F E A +
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM----DGNFKQGNVLE-ALALRD 672
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEE--GVEKAVEILRSMPERGLSPD 110
+M + G ++ Y L+ WG ++KA L M G+ PD
Sbjct: 673 KMAEIGMKLDLLAYTSLV-----WGLSHCNQLQKARSFLEEMIGEGIHPD 717
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 67.0 bits (162), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C +R E+ +F EM +GL D TY++L H +C G A KV
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL-----NVAQKVF 382
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ M+D G SP +V YN L+ C+ G +EKA+ ++ + + + D +Y+ +I
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNG---KIEKALVMVEDLQKSEMDVDIITYNIII 436
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I G C+ +A+ +F+ M KG PD TY++L FC S E K+
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK-----SKRVEDGMKLF 347
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
EM G YN LIH YC G + A ++ M + G+SPD +Y+
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAG---KLNVAQKVFNRMVDCGVSPDIVTYN 398
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A+I E EA +++EM R+ + P+ TY+SL + FC G A +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD-----AKYMFD 313
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
M+ G P VV YN LI +C + VE +++ M +GL DA +Y+ +I +
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCK---SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 370
Query: 123 QIWEL 127
Q +L
Sbjct: 371 QAGKL 375
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N VI GLC R A VF M++KG+ D TY++L + G W++ A ++L
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG----RWTDAA-RLL 242
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M+ P+V+ + LI ++ E + +A + + M R + P+ +Y+++I+ F
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVK---EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +IQGLC + +EA +F + RKG+ PD Y ++ C G +ADK+
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL-----QREADKLC 487
Query: 62 SEMIDSGFSPSVVEYNKLIHSY 83
M + GF PS Y++ + +
Sbjct: 488 RRMKEDGFMPSERIYDETLRDH 509
Score = 45.8 bits (107), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 23 EMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHS 82
+M + G P T SL + FC + ++A ++ M GF P+VV YN +I+
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRF-----QEAVSLVDSMDGFGFVPNVVIYNTVING 193
Query: 83 YCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
C + A+E+ M ++G+ DA +Y+ +IS
Sbjct: 194 LCK---NRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I GLC + +EA+ V EM G TYSSL ++ + A KVL
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID-----RYFKVKRQDLASKVL 732
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
S+M+++ +P+VV Y ++I C G ++A ++++ M E+G P+ +Y+ +I F
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVG---KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 122 GQIWEL 127
G I ++
Sbjct: 790 GMIGKI 795
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
V+ LC + E A +FEEMKR GL D TY+ + FC G E+A K +E
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLI-----EQARKWFNE 543
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS---K 120
M + G +P+VV Y LIH+Y + V A E+ +M G P+ +YS +I K
Sbjct: 544 MREVGCTPNVVTYTALIHAYLK---AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 121 FGQI 124
GQ+
Sbjct: 601 AGQV 604
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A+I GLC RR +A V E++K G + D Y+ L LFCD +EK ++L+
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN-----NTEKVYEMLT 570
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
+M G P + YN LI + E VE+ +E +R E GL P +Y VI +
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR---EDGLDPTVTTYGAVIDAYC 627
Query: 123 QIWEL 127
+ EL
Sbjct: 628 SVGEL 632
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 33/153 (21%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFY--ASYWSEK-- 56
+N ++ G+C A F +M+++G+ + TY +L H C A YW EK
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 57 --------------------------ADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEE 90
A +V+ ++ + GFS ++ YN LI +C +
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD---KN 560
Query: 91 GVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
EK E+L M + G PD+ +Y+ +IS FG+
Sbjct: 561 NTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I C + E+ + +M+++G PD TY++L F G + + E ++++
Sbjct: 550 NMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFF---GKHKDF--ESVERMM 604
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMP-ERGLSPDAESYSNVISK 120
+M + G P+V Y +I +YCS G +++A+++ + M ++P+ Y+ +I+
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGE---LDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 121 FGQI 124
F ++
Sbjct: 662 FSKL 665
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMK-RKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
N +I GLC R +EAE + MK + AP+ TY+ L +C G E A +V
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKL-----ETAKEV 428
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+S M + P+VV N ++ C G+ AV M + G+ + +Y +I
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCR---HHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 66.6 bits (161), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I LC + ++A F+EM G+ P+E TY+ L C G ++++ K+ ++
Sbjct: 501 IINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGD-----TDRSVKLFAK 555
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
M ++G SP + YN I S+C V+KA E+L++M GL PD +YS +I +
Sbjct: 556 MKENGLSPDLYAYNATIQSFCKM---RKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 37/152 (24%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NAVI LC RR E A EM+ +G++P+ T+++ G+ +K VL
Sbjct: 429 NAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLS-----GYSVRGDVKKVHGVL 483
Query: 62 SEMIDSGFSPSVVEYNKLIHSYC----------------SWGWEEG-------------- 91
+++ GF P V+ ++ +I+ C WG E
Sbjct: 484 EKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCST 543
Query: 92 --VEKAVEILRSMPERGLSPDAESYSNVISKF 121
+++V++ M E GLSPD +Y+ I F
Sbjct: 544 GDTDRSVKLFAKMKENGLSPDLYAYNATIQSF 575
Score = 46.2 bits (108), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NAVI L + A F++M+ G PD TY+ L H C G ++A +++
Sbjct: 184 NAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVV-----DEAIRLV 238
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPD 110
+M G P+V Y LI + G V++A++ L M R L+P+
Sbjct: 239 KQMEQEGNRPNVFTYTILIDGFLIAG---RVDEALKQLEMMRVRKLNPN 284
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 66.2 bits (160), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I C + +EA +EMK GL D Y+SL FCD G ++ + E
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL-----DRGKALFDE 272
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+++ G SP + YN LI +C G +++A EI M ERG+ P+ +Y+ +I
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLG---QLKEASEIFEFMIERGVRPNVYTYTGLI 324
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+G C + +EA +FE M +G+ P+ TY+ L C G +++A ++L
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG-----KTKEALQLL 340
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
+ MI+ P+ V YN +I+ C G V AVEI+ M +R PD +Y+
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGL---VADAVEIVELMKKRRTRPDNITYN 391
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++GLC +A ++ EM+R L PD +Y+++ FC+ EKA ++
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE-----GKELEKALELA 200
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+EM SG S S+V + LI ++C G +++A+ L+ M GL D Y+++I F
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAG---KMDEAMGFLKEMKFMGLEADLVVYTSLIRGF 257
Query: 122 GQIWEL 127
EL
Sbjct: 258 CDCGEL 263
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I+G C + +A+F+E+ +G +P TY++L FC G ++A ++
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL-----KEASEIFE 306
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI+ G P+V Y LI C G ++A+++L M E+ P+A +Y+ +I+K
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVG---KTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ LC E ++A +FEEM+R PD + F++ D A + A+ +L
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS----FNIMIDGSLKAGD-IKSAESLL 587
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M +G SP + Y+KLI+ + G+ +++A+ M + G PDA +V+
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGY---LDEAISFFDKMVDSGFEPDAHICDSVL 641
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A+I GLC RR +A V E++K G + D Y+ L LFCD +EK ++L+
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN-----NAEKVYEMLT 570
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
+M G P + YN LI + E VE+ +E +R E GL P +Y VI +
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR---EDGLDPTVTTYGAVIDAYC 627
Query: 123 QIWEL 127
+ EL
Sbjct: 628 SVGEL 632
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 33/153 (21%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFY--ASYWSEK-- 56
+N ++ G+C A F +M+++G+ + TY +L H C A YW EK
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 57 --------------------------ADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEE 90
A +V+ ++ + GFS ++ YN LI +C +
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD---KN 560
Query: 91 GVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
EK E+L M + G PD+ +Y+ +IS FG+
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I C + E+ + +M+++G PD TY++L F G + + E ++++
Sbjct: 550 NMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF---GKHKDF--ESVERMM 604
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMP-ERGLSPDAESYSNVISK 120
+M + G P+V Y +I +YCS G +++A+++ + M ++P+ Y+ +I+
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVG---ELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 121 FGQI 124
F ++
Sbjct: 662 FSKL 665
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C + E A+ V MK + P+ T +++ C + A
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC-----RHHGLNMAVVFF 464
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M G +VV Y LIH+ CS VEKA+ M E G SPDA+ Y +IS
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVS---NVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 122 GQI 124
Q+
Sbjct: 522 CQV 524
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMK-RKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
N +I GLC R +EAE + MK + P+ TY+ L +C G E A +V
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKL-----ETAKEV 428
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+S M + P+VV N ++ C G+ AV M + G+ + +Y +I
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCR---HHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I LC E +KE A +E +KGL P+ +Y+ L +C Y + A K+L
Sbjct: 349 NILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEY-----DIASKLL 403
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+M + G P +V Y LIH G ++ AV + + +RG+SPDA Y+ ++S
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGH---MDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ GLC R A+ +F EM + + PD Y++L GF S ++A KV
Sbjct: 454 NMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLID-----GFIRSGDFDEARKVF 508
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
S ++ G VV +N +I +C G +++A+ + M E L PD +YS +I +
Sbjct: 509 SLSVEKGVKVDVVHHNAMIKGFCRSGM---LDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I+G C +EA A M + L PD+ TYS++ G+ A K+
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID-----GYVKQQDMATAIKIF 578
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M + P+VV Y LI+ +C G + A E + M R L P+ +Y+ +I
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQG---DFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Query: 122 GQ 123
+
Sbjct: 636 AK 637
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+IQ C + + A + +M +G PD TY L H G S + A + +
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIH-----GLVVSGHMDDAVNMKVK 440
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ID G SP YN L+ C G A + M +R + PDA Y+ +I F
Sbjct: 441 LIDRGVSPDAAIYNMLMSGLCKTGR---FLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 43/155 (27%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C E A VF+E+K KG P +T+ ++ + FC G + + +D++L
Sbjct: 244 NTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA-----SDRLL 298
Query: 62 SEMIDSGF-----------------------------------SPSVVEYNKLIHSYCSW 86
SE+ + G P V YN LI+ C
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKE 358
Query: 87 GWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
G + E AV L ++GL P+ SY+ +I +
Sbjct: 359 GKK---EVAVGFLDEASKKGLIPNNLSYAPLIQAY 390
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A+I GLC RR +A V E++K G + D Y+ L LFCD +EK ++L+
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN-----NAEKVYEMLT 570
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
+M G P + YN LI + E VE+ +E +R E GL P +Y VI +
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR---EDGLDPTVTTYGAVIDAYC 627
Query: 123 QIWEL 127
+ EL
Sbjct: 628 SVGEL 632
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 33/153 (21%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFY--ASYWSEK-- 56
+N ++ G+C A F +M+++G+ + TY +L H C A YW EK
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 57 --------------------------ADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEE 90
A +V+ ++ + GFS ++ YN LI +C +
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD---KN 560
Query: 91 GVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
EK E+L M + G PD+ +Y+ +IS FG+
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I C + E+ + +M+++G PD TY++L F G + + E ++++
Sbjct: 550 NMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF---GKHKDF--ESVERMM 604
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMP-ERGLSPDAESYSNVISK 120
+M + G P+V Y +I +YCS G +++A+++ + M ++P+ Y+ +I+
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGE---LDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 121 FGQI 124
F ++
Sbjct: 662 FSKL 665
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C + E A+ V MK + P+ T +++ G + A
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV-----GGMCRHHGLNMAVVFF 464
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M G +VV Y LIH+ CS VEKA+ M E G SPDA+ Y +IS
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVS---NVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 122 GQI 124
Q+
Sbjct: 522 CQV 524
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMK-RKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
N +I GLC R +EAE + MK + P+ TY+ L +C G E A +V
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKL-----ETAKEV 428
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+S M + P+VV N ++ C G+ AV M + G+ + +Y +I
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCR---HHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 66.2 bits (160), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N ++ LC + + E+ +++ KG+ PD TY++L + G E+A ++
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM-----EEAFEL 292
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++ M GFSP V YN +I+ C G E+A E+ M GLSPD+ +Y +++
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHG---KYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I+G C + E+ E+M +G PD +Y++L +GF KA ++
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI-----YGFVREENMSKAFGLV 643
Query: 62 SEMIDS--GFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+M + G P V YN ++H +C + +++A +LR M ERG++PD +Y+ +I+
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCR---QNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 120 KF 121
F
Sbjct: 701 GF 702
Score = 63.2 bits (152), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N VI GLC + E A+ VF EM R GL+PD TY SL C G + +KV
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV-----ETEKVF 363
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
S+M P +V ++ ++ + G ++KA+ S+ E GL PD Y+ +I +
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSG---NLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I L E A V++E+ R G+ + T + + + C G EK L
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKM-----EKVGTFL 258
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
S++ + G P +V YN LI +Y S G +E+A E++ +MP +G SP +Y+ VI+
Sbjct: 259 SQVQEKGVYPDIVTYNTLISAYSSKGL---MEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+IQG C + A + EM ++G A D TY+++ H C +ADK+ +E
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG-----EADKLFNE 470
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
M + P LI +C G ++ A+E+ + M E+ + D +Y+ ++ FG+
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLG---NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 124 IWEL 127
+ ++
Sbjct: 528 VGDI 531
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+++ G C + + +EAE V +M +G+ PD TY+ + + GF + +A ++
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN-----GFVSQDNLTEAFRIH 715
Query: 62 SEMIDSGFSP 71
EM+ GFSP
Sbjct: 716 DEMLQRGFSP 725
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
+ A+ ++ +M K + P +YS L + C G A +A +V EMI P+V+
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA-----EAFRVWDEMISKNIKPTVM 586
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
N +I YC G L M G PD SY+ +I F
Sbjct: 587 ICNSMIKGYCRSG---NASDGESFLEKMISEGFVPDCISYNTLIYGF 630
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ GLC + EA+ +F EM + L PD T + L C G + A ++
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL-----QNAMELF 503
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+M + VV YN L+ + G ++ A EI M + + P SYS +++
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVG---DIDTAKEIWADMVSKEILPTPISYSILVN 558
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 66.2 bits (160), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A++ G+C E R +AE EM R G+ PD+ TY+ + FC G ++ K+L
Sbjct: 454 SALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD-----AQTGFKLL 508
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM G PSVV YN L++ C G ++ A +L +M G+ PD +Y+ ++
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLG---QMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I LC E + + A +F+EM ++GL P++ +++L H G + + +
Sbjct: 314 SALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH-----GHSRNGEIDLMKESY 368
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M+ G P +V YN L++ +C G + A I+ M RGL PD +Y+ +I F
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNG---DLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ G C A + + M R+GL PD+ TY++L FC G E A ++
Sbjct: 384 NTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV-----ETALEIR 438
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM +G V ++ L+ C G E+A LR M G+ PD +Y+ ++ F
Sbjct: 439 KEMDQNGIELDRVGFSALVCGMCKEGRVIDAERA---LREMLRAGIKPDDVTYTMMMDAF 495
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++GL R+K +A +F MK KG P+ ++Y+ + FC E A +
Sbjct: 337 NVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM-----ETAIEYF 391
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M+DSG P Y LI + G ++ ++ E+L+ M E+G PD ++Y+ +I
Sbjct: 392 DDMVDSGLQPDAAVYTCLITGF---GTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
++ G C R EA ++ +M +GL PD ++ + G S A K+
Sbjct: 302 TVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLE-----GLLRSRKKSDAIKLF 356
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M G P+V Y +I +C + +E A+E M + GL PDA Y+ +I+ F
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCK---QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 122 G 122
G
Sbjct: 414 G 414
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+I G +++ + + +EM+ KG PD KTY++L L + E A ++
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKM-----PEHATRIY 461
Query: 62 SEMIDSGFSPSVVEYNKLIHSY-CSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++MI + PS+ +N ++ SY + +E G +AV M ++G+ PD SY+ +I
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKSYFMARNYEMG--RAV--WEEMIKKGICPDDNSYTVLI 515
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++ + R E AV+EEM +KG+ PD+ +Y+ L G S +A + L
Sbjct: 477 NMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIR-----GLIGEGKSREACRYL 531
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVE 97
EM+D G +++YNK + G E E+ +
Sbjct: 532 EEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 567
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 65.5 bits (158), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+ LC + A +F+EM KG P+E T+ L +C G ++K ++L
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL-----TDKGLELL 205
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ M G P+ V YN ++ S+C G + EK VE +R E GL PD ++++ IS
Sbjct: 206 NAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR---EEGLVPDIVTFNSRISAL 262
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ GLC +A+ + MKR G+ PD TY L H +C G + A +L
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG-----KVDAAKSLL 419
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEG-VEKAVEILRSMPERGLSPDAESYSNVI 118
EM+ + P+ N L+HS W+ G + +A E+LR M E+G D + + ++
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSL----WKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 33/152 (21%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADK--- 59
++ GLC R EA+ +F EM + L PD Y+ H FC G +S + D
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Query: 60 ---------------------------VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGV 92
++ EM + G SP++ YN I C E V
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG---EKV 645
Query: 93 EKAVEILRSMPERGLSPDAESYSNVISKFGQI 124
E A +L M ++ ++P+ S+ +I F ++
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV 677
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++ ERR E ++++M G+AP T++ L CD S + A ++
Sbjct: 116 NLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCD-----SSCVDAARELF 170
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM + G P+ + L+ YC G +K +E+L +M G+ P+ Y+ ++S F
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGL---TDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 32/152 (21%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDW--------------- 46
N IQ LC + E+A + +EM +K +AP+ ++ L FC
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS 692
Query: 47 ------GFYASYWSE--------KADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGV 92
G Y+ ++E KA ++L ++D GF Y L+ S C ++ +
Sbjct: 693 ICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCK---KDEL 749
Query: 93 EKAVEILRSMPERGLSPDAESYSNVISKFGQI 124
E A IL M +RG D + VI G++
Sbjct: 750 EVASGILHKMIDRGYGFDPAALMPVIDGLGKM 781
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++G C E+A+ +FE ++ ++Y+ G + +A+ VL
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI-----EAETVL 349
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M D G PS+ YN L+ C G + A I+ M G+ PDA +Y ++ +
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGM---LSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Query: 122 GQIWEL 127
+ ++
Sbjct: 407 CSVGKV 412
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I GL ++ + E + +EMK KG++P+ TY++ C+ E A +L
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE-----GEKVEDATNLL 652
Query: 62 SEMIDSGFSPSVVEYNKLIHSYC 84
EM+ +P+V + LI ++C
Sbjct: 653 DEMMQKNIAPNVFSFKYLIEAFC 675
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ C E R +++E + E+M+ +GL PD T++S C G A ++
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLD-----ASRIF 275
Query: 62 SEM-IDSGFS---PSVVEYNKLIHSYCSWGWEEGVEKAVEILR 100
S+M +D P+ + YN ++ +C G E + E +R
Sbjct: 276 SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIR 318
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 65.5 bits (158), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I GLC + EA +F+ ++ GL P E TY L C G + A+K+L
Sbjct: 694 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD-----AEKLL 748
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M+ G P+++ YN ++ YC G E + V R M R ++PDA + S++I +
Sbjct: 749 DSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVS--RKMMGR-VTPDAFTVSSMIKGY 805
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKG-LAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+AVI G C + E A FE G L P+ TY++L C G K D+V
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLG--------KVDEV 226
Query: 61 ---LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
+ + D GF V Y+ IH Y G + A+ R M E+G++ D SYS +
Sbjct: 227 RDLVRRLEDEGFEFDCVFYSNWIHGYFKGG---ALVDALMQDREMVEKGMNRDVVSYSIL 283
Query: 118 I---SKFGQIWE 126
I SK G + E
Sbjct: 284 IDGLSKEGNVEE 295
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A+I+GLC + EEA +F + G+ DE Y +L C G +A +L
Sbjct: 317 AIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNL-----NRAFSMLG 371
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
+M G PS++ YN +I+ C G V +A E+ +G+ D +YS ++ +
Sbjct: 372 DMEQRGIQPSILTYNTVINGLCMAG---RVSEADEV-----SKGVVGDVITYSTLLDSYI 423
Query: 123 QI 124
++
Sbjct: 424 KV 425
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C E R +A V ++M G +P+ +Y +L CD G + ++ K L
Sbjct: 299 NTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF-----DEGKKYL 353
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EMI GFSP N L+ +CS+G VE+A +++ + + G + ++++ VI
Sbjct: 354 EEMISKGFSPHFSVSNCLVKGFCSFG---KVEEACDVVEVVMKNGETLHSDTWEMVI 407
Score = 55.8 bits (133), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+IQG C + + A + ++M KG PD +Y++L + C +A K+L
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLC-----RKTQLREAYKLLCR 285
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M G +P +V YN +I +C E+ A ++L M G SP++ SY +I
Sbjct: 286 MKLKGCNPDLVHYNTMILGFCR---EDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++Q C+ A +F +M + + PD +Y L FC G A ++L
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG-----QVNGAMELL 248
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M++ GF P + Y L++S C + + +A ++L M +G +PD Y+ +I F
Sbjct: 249 DDMLNKGFVPDRLSYTTLLNSLCR---KTQLREAYKLLCRMKLKGCNPDLVHYNTMILGF 305
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+ + E+A ++F+ MK +G PDE TY+SLF + ++A ++L
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLV-----DEAQRIL 573
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+EM+DSG P Y +I SY G + AV++ +M + G+ P+ Y ++I+ F
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGL---LSDAVDLYEAMEKTGVKPNEVVYGSLINGF 630
Query: 122 GQ 123
+
Sbjct: 631 AE 632
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 65.1 bits (157), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 38/159 (23%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWS------- 54
N +I GLC+E R EA A+ +M KGL D TY ++ + C G S +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 55 -----------------------EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWG-WEE 90
A + SEM++ G +P+V YN +I +CS+G W +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 91 GVEKAVEILRSMPERGLSPDAESYSNVIS---KFGQIWE 126
A +LR M ER ++PD +++ +IS K G+++E
Sbjct: 350 ----AQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Score = 62.0 bits (149), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I LC + +A+ +F EM KG+AP+ TY+ + FC +G WS+ A ++L
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG----RWSD-AQRLL 354
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+MI+ +P V+ +N LI + E + +A ++ M R + PD +Y+++I F
Sbjct: 355 RDMIEREINPDVLTFNALISASVK---EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I C +R +E + E+ R+GL + TY++L H FC+ + A +
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA-----AQDLF 490
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI--- 118
EMI G P + N L++ +C E +E+A+E+ + + D +Y+ +I
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCE---NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 119 ---SKFGQIWEL 127
SK + W+L
Sbjct: 548 CKGSKVDEAWDL 559
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I E + EAE + +EM + + PD TY+S+ + FC +
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD---------A 420
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M D SP VV +N +I YC + V++ +++LR + RGL + +Y+ +I F
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCR---AKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Query: 122 GQI 124
++
Sbjct: 478 CEV 480
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C A+ +F+EM G+ PD T + L + FC+ +EK ++ L
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE--------NEKLEEAL 522
Query: 62 S--EMID-SGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
E+I S V YN +IH C V++A ++ S+P G+ PD ++Y+ +I
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCK---GSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 119 SKF 121
S F
Sbjct: 580 SGF 582
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G+C + +EA +F + G+ PD +TY+ + FC S S+ A+ +
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG----KSAISD-ANVLF 595
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDA 111
+M D+G P YN LI G ++K++E++ M G S DA
Sbjct: 596 HKMKDNGHEPDNSTYNTLIRGCLKAG---EIDKSIELISEMRSNGFSGDA 642
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 23/135 (17%)
Query: 2 NAVIQGLCVERRKEEA-------------EAV--FEEMKRKGLAPDEKTYSSLFHLFCDW 46
N ++ GLC+E R EA EAV F++M GL P T+++L + C
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 47 GFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERG 106
G +A ++++M+ G VV Y +++ C G + A+ +L M E
Sbjct: 240 GRVL-----EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG---DTKSALNLLSKMEETH 291
Query: 107 LSPDAESYSNVISKF 121
+ PD YS +I +
Sbjct: 292 IKPDVVIYSAIIDRL 306
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 65.1 bits (157), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 14/131 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+GL + EA + EM KGL P+ +T++ L + C G + AD ++
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD-----ADGLV 449
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI--- 118
MI G+ P + +N LIH Y + + +E A+EIL M + G+ PD +Y++++
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYST---QLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 119 ---SKFGQIWE 126
SKF + E
Sbjct: 507 CKTSKFEDVME 517
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GLC + +EAE +M +GL PD TY++L +C G + A++++
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV-----QLAERIV 344
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI--- 118
+ + +GF P Y LI C E +A+ + +G+ P+ Y+ +I
Sbjct: 345 GDAVFNGFVPDQFTYRSLIDGLCH---EGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 119 SKFGQIWE 126
S G I E
Sbjct: 402 SNQGMILE 409
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWS-----EK 56
N +++ LC R+ +EA + EEMK K + PD T+ +L FC G ++ E+
Sbjct: 535 NILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Query: 57 ADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSN 116
A KV S S YN +IH++ + V A ++ + M +R L PD +Y
Sbjct: 595 AYKV---------SSSTPTYNIIIHAFTE---KLNVTMAEKLFQEMVDRCLGPDGYTYRL 642
Query: 117 VISKF 121
++ F
Sbjct: 643 MVDGF 647
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I + AE +F+EM + L PD TY + FC G + K L
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY-----KFL 660
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDA 111
EM+++GF PS+ ++I+ C E+ V +A I+ M ++GL P+A
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCV---EDRVYEAAGIIHRMVQKGLVPEA 707
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++ LC + +E E + +++ ++G+ P+ TY+ C G + A +++
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL-----DGAVRMV 274
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+I+ G P V+ YN LI+ C ++A L M GL PD+ +Y+ +I+ +
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCK---NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N IQGLC + A + + +G PD TY++L + C + ++A+ L
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF-----QEAEVYL 309
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M++ G P YN LI YC G V+ A I+ G PD +Y ++I
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGM---VQLAERIVGDAVFNGFVPDQFTYRSLI 363
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++ LC + + A+ + EM KG PD +Y+++ C+ G K + L
Sbjct: 185 NVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV------KEGREL 238
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS---NVI 118
+E F P V YN LI+ C E + A E++R M E+G+SP+ SYS NV+
Sbjct: 239 AER----FEPVVSVYNALINGLCK---EHDYKGAFELMREMVEKGISPNVISYSTLINVL 291
Query: 119 SKFGQI 124
GQI
Sbjct: 292 CNSGQI 297
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 34/153 (22%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWG---FYASYWSEKAD 58
NA+I GLC E + A + EM KG++P+ +YS+L ++ C+ G S+ ++
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLK 309
Query: 59 K-------VLSEMIDS---------------------GFSPSVVEYNKLIHSYCSWGWEE 90
+ LS ++ G P+VV YN L+ +CS G
Sbjct: 310 RGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG--- 366
Query: 91 GVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
+ KAV + M E G SP+ +Y ++I+ F +
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK 399
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ GL R EEA + E+ +G+ TY++L H C+ G A +++
Sbjct: 497 NELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI-----ALQLV 551
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M+ G SP + N +I +YC G E + ++++ S R PD SY+NVI
Sbjct: 552 GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV-SCGRRKWRPDVISYTNVI 607
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++QG C +A +VF M+ G +P+ +TY SL + F G + A +
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL-----DGAVYIW 410
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++M+ SG P+VV Y ++ + C + E +EI M + +P +++ I
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEI---MSKENCAPSVPTFNAFI 464
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 15/132 (11%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I GLC + ++A + EEM R G P+ T+++L C G W+EKA ++
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG-----WTEKAFRLFL 346
Query: 63 EMIDSG-FSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS-- 119
+++ S + P+V Y +I YC E+ + +A + M E+GL P+ +Y+ +I+
Sbjct: 347 KLVRSDTYKPNVHTYTSMIGGYCK---EDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 403
Query: 120 ----KFGQIWEL 127
FG+ +EL
Sbjct: 404 CKAGSFGRAYEL 415
Score = 60.5 bits (145), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I G C E + AE +F MK +GL P+ TY++L + C G + +A ++++
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFG-----RAYELMN 417
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
M D GF P++ YN I S C + +A E+L GL D +Y+ +I +
Sbjct: 418 LMGDEGFMPNIYTYNAAIDSLCK---KSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I C +++ +E+E +F+ + GL P ++TY+S+ +C G + A K
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI-----DLALKYF 556
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSP 109
M G P Y LI C + V++A ++ +M +RGLSP
Sbjct: 557 HNMKRHGCVPDSFTYGSLISGLCK---KSMVDEACKLYEAMIDRGLSP 601
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
+EA+ M ++G PD T + + C+ G +A +MID GF P+++
Sbjct: 234 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLV-----NRAIWYFRKMIDLGFKPNLI 288
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ LI C G +++A E+L M G P+ +++ +I
Sbjct: 289 NFTSLIDGLCKKG---SIKQAFEMLEEMVRNGWKPNVYTHTALI 329
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I E + +AE ++ EM R +AP+ TY+SL + FC G ++A ++
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV-----DEARQMF 305
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M G P VV Y LI+ +C + V+ A++I M ++GL+ + +Y+ +I F
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKC---KKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 122 GQI 124
GQ+
Sbjct: 363 GQV 365
Score = 60.1 bits (144), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I G C+ R EEA ++ +M G+ PD Y+++ C G + +Y A +
Sbjct: 147 SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG-HVNY----ALSLFD 201
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWG-WEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M + G P VV Y L++ C+ G W + A +LR M +R + PD +++ +I F
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRD----ADSLLRGMTKRKIKPDVITFNALIDAF 257
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+++ GLC R +A+++ M ++ + PD T+++L F G + A+++ +
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD-----AEELYN 271
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EMI +P++ Y LI+ +C G V++A ++ M +G PD +Y+++I+ F
Sbjct: 272 EMIRMSIAPNIFTYTSLINGFCMEGC---VDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I G C ++ ++A +F EM +KGL + TY++L GF A +V S
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ-----GFGQVGKPNVAQEVFS 376
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPER---GLSPDAESYS 115
M+ G P++ YN L+H C G V+KA+ I M +R G++P+ +Y+
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNG---KVKKALMIFEDMQKREMDGVAPNIWTYN 429
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ C + A + +M + G PD T++SL + FC E+A ++
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC-----LGNRMEEAMSMV 165
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
++M++ G P VV Y +I S C G V A+ + M G+ PD Y+++++
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNG---HVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRK---GLAPDEKTYSSLFHLFCDWGFYASYWSEKAD 58
N ++ LC + ++A +FE+M+++ G+AP+ TY+ L H C G EKA
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL-----EKAL 445
Query: 59 KVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
V +M ++ Y +I C G V+ AV + S+P +G+ P+ +Y+ +I
Sbjct: 446 MVFEDMRKREMDIGIITYTIIIQGMCKAG---KVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 119 S 119
S
Sbjct: 503 S 503
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I+ C +A +FEEM++KG+ + TY+SL F G S A K+L
Sbjct: 329 STLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREG-----NSSVAKKLL 383
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+M + G SP + Y ++ C G V+KA + M E ++PDA SY+++IS
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSG---NVDKAYGVFNDMIEHEITPDAISYNSLIS 438
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I G C R E+AEA+ M + G PD TY+ L + +Y + ++A+ V+
Sbjct: 224 NALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNY-----YYDNNMLKRAEGVM 278
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+EM+ SG YN+L+ +C + +++ M RG D SYS +I F
Sbjct: 279 AEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNF--MVKEMEPRGFC-DVVSYSTLIETF 335
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
++I+ E A+ + ++M GL+PD Y+++ C G +KA V
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSG-----NVDKAYGVF 418
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++MI+ +P + YN LI C G V +A+++ M + PD ++ +I
Sbjct: 419 NDMIEHEITPDAISYNSLISGLCRSGR---VTEAIKLFEDMKGKECCPDELTFKFII 472
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA++ G + + +E + VF EMKR+ + P+ TYS+L + G Y ++A ++
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY-----KEAMEIF 537
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
E +G VV Y+ LI + C G V AV ++ M + G+SP+ +Y+++I F
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGL---VGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 122 GQ 123
G+
Sbjct: 595 GR 596
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 21 FEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLI 80
F+EM+R G+ PD T++SL + G + E A + EM + V YN L+
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLW-----EAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 81 HSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
+ C G ++ A EIL MP + + P+ SYS VI F +
Sbjct: 382 DAICKGG---QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAK 421
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ VI G R +EA +F EM+ G+A D +Y++L ++ G SE+A +L
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVG-----RSEEALDIL 467
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM G VV YN L+ Y G + V+K + M + P+ +YS +I +
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKK---VFTEMKREHVLPNLLTYSTLIDGY 524
Query: 122 GQ 123
+
Sbjct: 525 SK 526
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 38/159 (23%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWS------- 54
N +I GLC+E R EA A+ +M KGL D TY ++ + C G S +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 55 -----------------------EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWG-WEE 90
A + SEM++ G +P+V YN +I +CS+G W +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 91 GVEKAVEILRSMPERGLSPDAESYSNVIS---KFGQIWE 126
A +LR M ER ++PD +++ +IS K G+++E
Sbjct: 350 ----AQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I LC + +A+ +F EM KG+AP+ TY+ + FC +G WS+ A ++L
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG----RWSD-AQRLL 354
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+MI+ +P V+ +N LI + E + +A ++ M R + PD +Y+++I F
Sbjct: 355 RDMIEREINPDVLTFNALISASVK---EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I C +R +E + E+ R+GL + TY++L H FC+ + A +
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA-----AQDLF 490
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI--- 118
EMI G P + N L++ +C E +E+A+E+ + + D +Y+ +I
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCE---NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 119 ---SKFGQIWEL 127
SK + W+L
Sbjct: 548 CKGSKVDEAWDL 559
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I E + EAE + +EM + + PD TY+S+ + FC +
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD---------A 420
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M D SP VV +N +I YC + V++ +++LR + RGL + +Y+ +I F
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCR---AKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Query: 122 GQI 124
++
Sbjct: 478 CEV 480
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C A+ +F+EM G+ PD T + L + FC+ +EK ++ L
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE--------NEKLEEAL 522
Query: 62 S--EMID-SGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
E+I S V YN +IH C V++A ++ S+P G+ PD ++Y+ +I
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCK---GSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 119 SKF 121
S F
Sbjct: 580 SGF 582
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G+C + +EA +F + G+ PD +TY+ + FC + A+ +
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD-----ANVLF 595
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDA 111
+M D+G P YN LI G ++K++E++ M G S DA
Sbjct: 596 HKMKDNGHEPDNSTYNTLIRGCLKAG---EIDKSIELISEMRSNGFSGDA 642
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 23/135 (17%)
Query: 2 NAVIQGLCVERRKEEA-------------EAV--FEEMKRKGLAPDEKTYSSLFHLFCDW 46
N ++ GLC+E R EA EAV F++M GL P T+++L + C
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 47 GFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERG 106
G +A ++++M+ G VV Y +++ C G + A+ +L M E
Sbjct: 240 GRVL-----EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG---DTKSALNLLSKMEETH 291
Query: 107 LSPDAESYSNVISKF 121
+ PD YS +I +
Sbjct: 292 IKPDVVIYSAIIDRL 306
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ + +EAE VF M G+ PD TYS L F EK +L
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKL-----RRLEKVCDLL 305
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM G P + YN L+ +Y G +++A+ + M G +P+A +YS +++ F
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSG---SIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362
Query: 122 GQ 123
GQ
Sbjct: 363 GQ 364
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
+EA VF +M+ G P+ TYS L +LF G Y + ++ EM S P
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRY-----DDVRQLFLEMKSSNTDPDAA 388
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
YN LI + G+ ++ V + M E + PD E+Y +I G+
Sbjct: 389 TYNILIEVFGEGGY---FKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 7 GLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMID 66
L E R + E V++EM R+ + P+ T++ + + C G KA V+ +M
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKM-----NKARDVMEDMKV 251
Query: 67 SGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
G SP+VV YN LI YC G + KA +L+ M E +SP+ +++ +I F
Sbjct: 252 YGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306
Score = 62.8 bits (151), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N VI LC + +A V E+MK G +P+ +Y++L +C G + KAD VL
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY--KADAVL 284
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
EM+++ SP++ +N LI + W ++ + ++++ + M ++ + P+ SY+++I+
Sbjct: 285 KEMVENDVSPNLTTFNILIDGF--WK-DDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GLC E A+ +F+++ KGL PD T+ L +C G S KA +L
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKG-----ESRKAAMLL 493
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSM--PERGLSPDAESYSNVIS 119
EM G P + YN ++ YC +EG KA +R+ ER L + SY+ ++
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYC----KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 120 KFGQ 123
+ Q
Sbjct: 550 GYSQ 553
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I C + ++ A+ EEM+R+G+ PD TY+ L C G E A K+
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI-----EAAKKLF 459
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
++ G P +V ++ L+ YC G KA +L+ M + GL P +Y+ V+ +
Sbjct: 460 DQLTSKGL-PDLVTFHILMEGYCRKGES---RKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 22/125 (17%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I GLC + EA ++ ++M G+ P+ TY++L + FC + +L
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK------------NDML 382
Query: 62 SEMID-------SGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
E +D G P+ YN LI +YC G ++ + M G+ PD +Y
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG---KIDDGFALKEEMEREGIVPDVGTY 439
Query: 115 SNVIS 119
+ +I+
Sbjct: 440 NCLIA 444
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ +++ E+ ++ + MK+ PD TY+ + +++ + G W ++ VL
Sbjct: 772 NTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG-----WIDEVADVL 826
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
E+ +SG P + YN LI +Y G VE+AV +++ M R + PD +Y+N+++
Sbjct: 827 KELKESGLGPDLCSYNTLIKAYGIGGM---VEEAVGLVKEMRGRNIIPDKVTYTNLVT 881
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GLC +R +AE +F+EM + L P TY++L +C G EK+ KV
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAG-----NPEKSFKVR 272
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
M PS++ +N L+ G VE A +L+ M + G PDA ++S
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGM---VEDAENVLKEMKDLGFVPDAFTFS 323
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C + A E M+++G+ PD Y+ L FC+ G E A+K +
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG-----EMENAEKEV 447
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
++M G SPSV YN LI Y G + +K +IL+ M + G P+ SY +I+
Sbjct: 448 NKMKLKGVSPSVETYNILIGGY---GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 1 MNA-----VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSE 55
MNA ++ LC E + E+AE + KGL P+E Y+++ +C G
Sbjct: 352 MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG---- 407
Query: 56 KADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
A + M G P + YN LI +C G E EK V M +G+SP E+Y+
Sbjct: 408 -ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN---KMKLKGVSPSVETYN 463
Query: 116 NVISKFGQIWE 126
+I +G+ +E
Sbjct: 464 ILIGGYGRKYE 474
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 33/156 (21%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLF----------------CD 45
N +++GL E+AE V +EMK G PD T+S LF + D
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 46 WGFYASYWS--------------EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
G + ++ EKA+++L + G P+ V YN +I YC G G
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVISKFGQIWEL 127
+E +M ++G+ PD +Y+ +I +F ++ E+
Sbjct: 408 ARMKIE---AMEKQGMKPDHLAYNCLIRRFCELGEM 440
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+ C E AE +MK KG++P +TY+ L G+ Y +K +L
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI-----GGYGRKYEFDKCFDIL 482
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM D+G P+VV Y LI+ C + +A + R M +RG+SP Y+ +I
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCLCKGSK---LLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+I LC + EA+ V +M+ +G++P + Y+ L C G E A +
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG-----KIEDAFRFSK 553
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
EM+ G ++V YN LI G + +A ++L + +GL PD +Y+++IS +G
Sbjct: 554 EMLKKGIELNLVTYNTLIDGLSMTGK---LSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 12/117 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GL + + EAE + E+ RKGL PD TY+SL +GF + ++ +
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS---GYGFAGNV--QRCIALY 622
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM SG P++ Y+ LI S C+ +EG+E R E L PD Y+ V+
Sbjct: 623 EEMKRSGIKPTLKTYHLLI-SLCT---KEGIELTE---RLFGEMSLKPDLLVYNGVL 672
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C + + E+A +EM +KG+ + TY++L G + +A+ +L
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID-----GLSMTGKLSEAEDLL 587
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
E+ G P V YN LI Y G+ V++ + + M G+ P ++Y +IS
Sbjct: 588 LEISRKGLKPDVFTYNSLISGY---GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I E R EAE +EEM R+ L PD TYS L + C Y+ ++A+++
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC---MYSRL--DEAEEMF 314
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M+ G P VV Y+ LI+ YC + VE +++ M +RG+ + +Y+ +I +
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCK---SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 33/145 (22%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFH-------------LFCDW---- 46
+I GLC+ R +EAE +F M KG PD TYS L + LFC+
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 47 -------------GFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVE 93
G+ + A+++ M+ G P+++ YN L+H C G +E
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG---KIE 413
Query: 94 KAVEILRSMPERGLSPDAESYSNVI 118
KA+ IL M + G+ D +Y+ +I
Sbjct: 414 KALVILADMQKNGMDADIVTYNIII 438
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GLC ++ + A + M++ G+ PD TY+SL C G WS+ A +++
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG----RWSD-ATRMV 244
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
S M P V +N LI + E V +A E M R L PD +YS +I
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVK---EGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+IQG C + AE +F M G+ P+ TY+ L H CD G EKA +L++
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI-----EKALVILAD 421
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M +G +V YN +I C G V A +I S+ +GL PD +Y+ ++
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAG---EVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFC--DWGFYASYWSEKADK 59
N ++ C + A + +M + G P T+ SL + FC D + A Y
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY------- 172
Query: 60 VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+ +M+ G+ P+VV YN +I C + V+ A+++L M + G+ PD +Y+++IS
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCK---SKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I E + EA+ ++ EM +G+APD TY+SL FC +A+++
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL-----HEANQMF 373
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M+ G P +V Y+ LI+SYC + V+ + + R + +GL P+ +Y+ ++ F
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCK---AKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 122 GQ 123
Q
Sbjct: 431 CQ 432
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
VI LC + ++A ++F EM+ KG+ D TYSSL C+ G W + A K+L E
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG----KWDDGA-KMLRE 305
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI P VV ++ LI + E + +A E+ M RG++PD +Y+++I F
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVK---EGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+++I GLC + + ++ + EM + + PD T+S+L +F G +A ++
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL-----EAKELY 338
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+EMI G +P + YN LI +C E + +A ++ M +G PD +YS +I+ +
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCK---ENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKAD--- 58
N++I G C E EA +F+ M KG PD TYS L + +C +++ D
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK--------AKRVDDGM 405
Query: 59 KVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
++ E+ G P+ + YN L+ +C G + A E+ + M RG+ P +Y
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSG---KLNAAKELFQEMVSRGVPPSVVTY 458
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
++ +I GLC++ R EA + + M G PDE TY + + C G S A +
Sbjct: 178 VSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN-----SALALDL 232
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M + SVV+Y+ +I S C G + A+ + M +G+ D +YS++I
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDG---SFDDALSLFNEMEMKGIKADVVTYSSLI 287
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ G C + A+ +F+EM +G+ P TY L CD G KA ++
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL-----NKALEIF 478
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M S + + YN +IH C+ V+ A + S+ ++G+ PD +Y+ +I
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCN---ASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G+C + ++A ++F + KG+ PD TY+ + C G + +AD +
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS-----EADMLF 548
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M + G +P YN LI ++ G+ +VE++ M G S D+ + VI
Sbjct: 549 RKMKEDGCTPDDFTYNILIRAHLG---GSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ ++ G C+E R EA A+ + M PD T S+L + C G + +A ++
Sbjct: 144 STLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS-----EALVLI 198
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M++ GF P V Y +++ C G A+++ R M ER + YS VI
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSG---NSALALDLFRKMEERNIKASVVQYSIVI 252
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 8/107 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
++AE + E ++ GL+PD TY+SL ++ G W KA+++L + S P +V
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRG---ECW--KAEEILKTLEKSQLKPDLV 702
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
YN +I +C G +++AV +L M ERG+ P +Y+ +S +
Sbjct: 703 SYNTVIKGFCRRGL---MQEAVRMLSEMTERGIRPCIFTYNTFVSGY 746
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ V+ E EA+ F E+K G P TY++L +F G Y S VL
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALS-----VL 339
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM ++ V YN+L+ +Y G+ ++A ++ M ++G+ P+A +Y+ VI +
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFS---KEAAGVIEMMTKKGVMPNAITYTTVIDAY 396
Query: 122 GQ 123
G+
Sbjct: 397 GK 398
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 20 VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSE-KADKVLSEMIDSGFSPSVVEYNK 78
VF EMK G PD T+++L + G SE A K+ EM +GF+ V YN
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCG------SEVDASKMYGEMTRAGFNACVTTYNA 531
Query: 79 LIHSYCSWG-WEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
L+++ G W G ++ M +G P SYS ++ + +
Sbjct: 532 LLNALARKGDWRSG----ENVISDMKSKGFKPTETSYSLMLQCYAK 573
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++GL +K +A +F MK KG P+ ++Y+ + FC E A +
Sbjct: 337 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM-----ETAIEYF 391
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M+DSG P Y LI + G ++ ++ E+L+ M E+G PD ++Y+ +I
Sbjct: 392 DDMVDSGLQPDAAVYTCLITGF---GTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
++ G C R EA ++ +M GL PD ++ + G S A K+
Sbjct: 302 TVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLE-----GLLRSMKKSDAIKLF 356
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M G P+V Y +I +C + +E A+E M + GL PDA Y+ +I+ F
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCK---QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 122 G 122
G
Sbjct: 414 G 414
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++ V R E AV++EM +KG+ PD+ +Y+ L G + S +A + L
Sbjct: 477 NMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIR-----GLISEGKSREACRYL 531
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVE 97
EM+D G +++YNK + G E E+ +
Sbjct: 532 EEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 567
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+I G +++ + + +EM+ KG PD KTY++L L + E ++
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKM-----PEHGTRIY 461
Query: 62 SEMIDSGFSPSVVEYNKLIHSY-CSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++MI + PS+ +N ++ SY + +E G +AV M ++G+ PD SY+ +I
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKSYFVARNYEMG--RAV--WDEMIKKGICPDDNSYTVLI 515
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ LC + +A+ VFE M R PD KTYS L WG + KA +V
Sbjct: 207 NGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLE---GWGKEPNL--PKAREVF 260
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EMID+G P +V Y+ ++ C G V++A+ I+RSM P YS ++ +
Sbjct: 261 REMIDAGCHPDIVTYSIMVDILCKAG---RVDEALGIVRSMDPSICKPTTFIYSVLVHTY 317
Query: 122 G 122
G
Sbjct: 318 G 318
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 10 VERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGF 69
E R EEA F EM+R G+ D ++SL FC + + +VL EM G
Sbjct: 319 TENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVY-----RVLKEMKSKGV 373
Query: 70 SPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQIWEL 127
+P+ N ++ G + ++A ++ R M + PDA++Y+ VI F + E+
Sbjct: 374 TPNSKSCNIILRHLIERGEK---DEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEM 427
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++ L K+EA VF +M K PD TY+ + +FC+ E ADKV
Sbjct: 381 NIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCE-----KKEMETADKVW 434
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
M G PS+ ++ LI+ C E +KA +L M E G+ P ++ +
Sbjct: 435 KYMRKKGVFPSMHTFSVLINGLCE---ERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++GL +K +A +F MK KG P+ ++Y+ + FC E A +
Sbjct: 336 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS-----SMETAIEYF 390
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M+DSG P Y LI + G ++ ++ E+L+ M E+G PD ++Y+ +I
Sbjct: 391 DDMVDSGLQPDAAVYTCLITGF---GTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 444
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
++ G C R EA ++ +M GL PD ++ + G S A K+
Sbjct: 301 TVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLE-----GLLRSMKKSDAIKLF 355
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M G P+V Y +I +C + +E A+E M + GL PDA Y+ +I+ F
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCK---QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 412
Query: 122 G 122
G
Sbjct: 413 G 413
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++ V R E AV++EM +KG+ PD+ +Y+ L G + S +A + L
Sbjct: 476 NMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIR-----GLISEGKSREACRYL 530
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVE 97
EM+D G +++YNK + G E E+ +
Sbjct: 531 EEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 566
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+I G +++ + + +EM+ KG PD KTY++L L + E ++
Sbjct: 406 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKM-----PEHGTRIY 460
Query: 62 SEMIDSGFSPSVVEYNKLIHSY-CSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++MI + PS+ +N ++ SY + +E G +AV M ++G+ PD SY+ +I
Sbjct: 461 NKMIQNEIEPSIHTFNMIMKSYFVARNYEMG--RAV--WDEMIKKGICPDDNSYTVLI 514
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 62.8 bits (151), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ G + R E A FE+MK +G++PD+ T++++ + FC + ++A+K+
Sbjct: 259 NLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKM-----DEAEKLF 313
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM + PSVV Y +I Y + + V+ + I M G+ P+A +YS ++
Sbjct: 314 VEMKGNKIGPSVVSYTTMIKGYLA---VDRVDDGLRIFEEMRSSGIEPNATTYSTLL 367
Score = 48.9 bits (115), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
+E+ +F++MK G+ K+Y+SLF + G Y A + ++M+ G P+
Sbjct: 202 QESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYM-----MAKRYFNKMVSEGVEPTRH 256
Query: 75 EYNKLIHSYCSWGW--EEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
YN ++ WG+ +E A+ M RG+SPD +++ +I+ F
Sbjct: 257 TYNLML-----WGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGF 300
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+++ C E KEEA + EM++KG+ + Y++L + S E+ + + +
Sbjct: 349 GLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD-----AYNKSNHIEEVEGLFT 403
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
EM D G PS YN L+ +Y + VE +LR M + GL P+ +SY+ +IS +G
Sbjct: 404 EMRDKGLKPSAATYNILMDAYARRMQPDIVE---TLLREMEDLGLEPNVKSYTCLISAYG 460
Query: 123 QIWEL 127
+ ++
Sbjct: 461 RTKKM 465
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 33/156 (21%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLF---CDWGFYASYWS---- 54
A+I V E+A A FEEM ++G+ P +TY+S+ F D G W
Sbjct: 489 TALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLR 548
Query: 55 EK-----------------------ADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
EK A V+SE G PSV+ YN L+++Y G +
Sbjct: 549 EKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQD-- 606
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVISKFGQIWEL 127
K ++L+ M L PD+ +YS +I F ++ +
Sbjct: 607 -AKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDF 641
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ + + E + EM+ GL P+ K+Y+ L + S+ A
Sbjct: 418 NILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGR----TKKMSDMAADAF 473
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M G PS Y LIH+Y GW EKA M + G+ P E+Y++V+ F
Sbjct: 474 LRMKKVGLKPSSHSYTALIHAYSVSGWH---EKAYASFEEMCKEGIKPSVETYTSVLDAF 530
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEM-KRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
N I GLC + E+A +F ++ PDE TY+ L H G + KA +
Sbjct: 723 NVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIH-----GCAIAGDINKAFTL 777
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM G P++V YN LI C G V++A +L +P++G++P+A +Y+ +I
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLG---NVDRAQRLLHKLPQKGITPNAITYNTLI 832
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I+G C + EEAE VFE +K K L D+ Y L +C G A +V
Sbjct: 301 SLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTG-----QIRDAVRVHD 355
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI+ G + N LI+ YC G + +A +I M + L PD +Y+ ++ +
Sbjct: 356 NMIEIGVRTNTTICNSLINGYCKSG---QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I G C + EAE +F M L PD TY++L +C G+ ++A K+
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV-----DEALKLC 424
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS-- 119
+M P+V+ YN L+ Y G + + + M +RG++ D S S ++
Sbjct: 425 DQMCQKEVVPTVMTYNILLKGYSRIG---AFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481
Query: 120 -KFG------QIWE 126
K G ++WE
Sbjct: 482 FKLGDFNEAMKLWE 495
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
EA+ +F++M G+ PD Y++L C G+ ++A + MI+SG P VV
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYL-----KEAKMIFDRMIESGVKPDVVP 833
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
Y LI C G+ V KAV++++ M E+G+ P S S V
Sbjct: 834 YTALIAGCCRNGF---VLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 37/147 (25%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
V++GLC E R E+AE+V +M++ G+ PD YS++ G + KA V ++
Sbjct: 297 VVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIE-----GHRKNMNIPKAVDVFNK 351
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWG-WEEG------------------------------- 91
M+ + V + ++ YC G + E
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVI 118
VE+A+E+ R M +G++PD +Y+ +I
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLI 438
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 28/125 (22%)
Query: 19 AVFEEMKRKGLAPDEKTYSSL------------------------FHLFCDWGFYASYWS 54
A+F++MKR+ + PD TY+ L + + DW
Sbjct: 719 ALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLG 778
Query: 55 EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
E A ++ +MI+SG P Y LI C G+ +++A I M E G+ PD Y
Sbjct: 779 E-AKRIFDQMIESGVDPDAAPYTALIACCCKMGY---LKEAKMIFDRMIESGVKPDVVPY 834
Query: 115 SNVIS 119
+ +I+
Sbjct: 835 TALIA 839
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
EEA +F EM KG+APD Y++L C G + A ++ EM +G +P +V
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSD-----AFDLMIEMDGTGKTPDIV 467
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
YN L + G ++A E L+ M RG+ P +++ VI
Sbjct: 468 IYNVLAGGLATNGL---AQEAFETLKMMENRGVKPTYVTHNMVI 508
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+++G C EAE VF+EMK G+ P+ TYS + C G + +A V ++
Sbjct: 261 LVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQIS-----RAHDVFAD 315
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M+DSG +P+ + +N L+ + G EK +++ M + G PD +Y+ +I
Sbjct: 316 MLDSGCAPNAITFNNLMRVHVKAG---RTEKVLQVYNQMKKLGCEPDTITYNFLI 367
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
VI L +RR EA++ F+ +K + PD Y++L +C G + +A+KV E
Sbjct: 227 VISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS-----EAEKVFKE 280
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M +G P+V Y+ +I + C G + +A ++ M + G +P+A +++N++
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCG---QISRAHDVFADMLDSGCAPNAITFNNLM 332
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
VI LC + A VF +M G AP+ T+++L + G +EK +V ++
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG-----RTEKVLQVYNQ 350
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
M G P + YN LI ++C +E +E AV++L +M ++ +A +++ +
Sbjct: 351 MKKLGCEPDTITYNFLIEAHCR---DENLENAVKVLNTMIKKKCEVNASTFNTI 401
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 62.4 bits (150), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I LC E E++ + ++M++ G AP TY+++ H +C G + + A ++L
Sbjct: 237 NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA-----AIELL 291
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M G V YN LIH C + K +LR M +R + P+ +Y+ +I+ F
Sbjct: 292 DHMKSKGVDADVCTYNMLIHDLCR---SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 348
Score = 59.7 bits (143), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA++ + + +EM ++ + PD T++ L ++ C G + EK+ ++
Sbjct: 202 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSF-----EKSSYLM 256
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M SG++P++V YN ++H YC G + A+E+L M +G+ D +Y+ +I
Sbjct: 257 QKMEKSGYAPTIVTYNTVLHWYCKKG---RFKAAIELLDHMKSKGVDADVCTYNMLI 310
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I LC R + + +M+++ + P+E TY++L + F + G A ++L
Sbjct: 307 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI-----ASQLL 361
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
+EM+ G SP+ V +N LI + S E ++A+++ M +GL+P SY
Sbjct: 362 NEMLSFGLSPNHVTFNALIDGHIS---EGNFKEALKMFYMMEAKGLTPSEVSY 411
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+I GLC +EA + EM + G+ PD TYS+L + FC G + + A +++
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT-----AKEIVC 502
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS--- 119
+ G SP+ + Y+ LI++ C G +++A+ I +M G + D +++ +++
Sbjct: 503 RIYRVGLSPNGIIYSTLIYNCCRMGC---LKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 559
Query: 120 KFGQIWE 126
K G++ E
Sbjct: 560 KAGKVAE 566
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A+I G C R + A+ + + R GL+P+ YS+L + C G ++A ++
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL-----KEAIRIY 536
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI G + +N L+ S C G V +A E +R M G+ P+ S+ +I+ +
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAG---KVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 122 GQIWE 126
G E
Sbjct: 594 GNSGE 598
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 33/147 (22%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCD-------WGFYASY-- 52
NA+I G E +EA +F M+ KGL P E +Y L C GFY
Sbjct: 377 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 436
Query: 53 ---------------------WSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
+ ++A +L+EM G P +V Y+ LI+ +C G
Sbjct: 437 NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG---R 493
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVI 118
+ A EI+ + GLSP+ YS +I
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
+A +VF+EM + G P TY SL C G +A+K L + + V
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL-----REAEKFLKSLHAVPAAVDTVM 655
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
YN L+ + C G + KAV + M +R + PD+ +Y+++IS
Sbjct: 656 YNTLLTAMCKSG---NLAKAVSLFGEMVQRSILPDSYTYTSLIS 696
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I LC ++A V +M+ +G PD T++SL H G++ KA
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMH-----GYFVGSHVRKALSTY 736
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
S M+++G SP+V YN +I G + V+K L M RG+ PD +Y+ +IS
Sbjct: 737 SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW---LSEMKSRGMRPDDFTYNALISGQ 793
Query: 122 GQI 124
+I
Sbjct: 794 AKI 796
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 26/140 (18%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFY------------ 49
N VI GLC +EA EM + G+ PD +Y++L FC G +
Sbjct: 165 NTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE 224
Query: 50 ----------ASYWSEKA-DKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEI 98
+SY++ A ++ +M+ SGF P VV ++ +I+ C G V + +
Sbjct: 225 LNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGG---KVLEGGLL 281
Query: 99 LRSMPERGLSPDAESYSNVI 118
LR M E + P+ +Y+ ++
Sbjct: 282 LREMEEMSVYPNHVTYTTLV 301
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+GL +E + EMK +G+ PD+ TY++L G + +
Sbjct: 752 NTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT-----IY 806
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
EMI G P YN LI + + G + +A E+L+ M +RG+SP+ +Y +IS
Sbjct: 807 CEMIADGLVPKTSTYNVLISEFANVG---KMLQARELLKEMGKRGVSPNTSTYCTMIS 861
Score = 52.4 bits (124), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
EAE F+ + P+ TY++L C G +S A+ ++++M++ P+VV
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS-----AEFIITQMLEKSVIPNVVT 401
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
Y+ +I+ Y G +E+AV +LR M ++ + P+ +Y VI
Sbjct: 402 YSSMINGYVKKGM---LEEAVSLLRKMEDQNVVPNGFTYGTVI 441
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 28 GLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWG 87
G+ PD + ++SL H F G ++ + S+MI G SP V N LIHS+C G
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLV----HDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG 143
Query: 88 WEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+ A+ +LR+ R +S D +Y+ VIS
Sbjct: 144 ---RLSFAISLLRN---RVISIDTVTYNTVIS 169
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I G C + R ++A+ + + M KG +PD T+S+L + G+ + + ++
Sbjct: 14 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLIN-----GYCKAKRVDNGMEIF 68
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM G + V Y LIH +C G ++ A ++L M G++PD ++ +++
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVG---DLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 122 GQIWEL 127
EL
Sbjct: 126 CSKKEL 131
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I G C +R + +F EM R+G+ + TY++L H FC G + A +L
Sbjct: 49 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL-----DAAQDLL 103
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSM 102
+EMI G +P + ++ ++ CS ++ + KA IL +
Sbjct: 104 NEMISCGVAPDYITFHCMLAGLCS---KKELRKAFAILEDL 141
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+++GLC+ ++ E + +KGLAP+ TYS L Y +++A K+L
Sbjct: 180 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLE-----AAYKERGTDEAVKLL 234
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
E+I G P++V YN L+ +C E + A+ + R +P +G + SY+
Sbjct: 235 DEIIVKGGEPNLVSYNVLLTGFCK---EGRTDDAMALFRELPAKGFKANVVSYN 285
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ G C E R ++A A+F E+ KG + +Y+ L C G + E+A+ +L
Sbjct: 250 NVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW-----EEANSLL 304
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPE--RGLSPDAESYSNVIS 119
+EM +PSVV YN LI+S G E+A+++L+ M + A SY+ VI+
Sbjct: 305 AEMDGGDRAPSVVTYNILINSLAFHG---RTEQALQVLKEMSKGNHQFRVTATSYNPVIA 361
Query: 120 KF 121
+
Sbjct: 362 RL 363
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 8 LCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDS 67
LC R ++A V E M G+ PD Y+ L + C G A +++ +M D
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGY-----AMQLVEKMEDH 170
Query: 68 GFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
G+ + V YN L+ C G + ++++ + + ++GL+P+A +YS
Sbjct: 171 GYPSNTVTYNALVRGLCMLG---SLNQSLQFVERLMQKGLAPNAFTYS 215
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N ++ LC ER+ +EA + ++G DE TY +L GF+ EKA ++
Sbjct: 454 LNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI-----MGFFREEKVEKALEM 508
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM +P+V +N LI C G E A+E + E GL PD +++++I
Sbjct: 509 WDEMKKVKITPTVSTFNSLIGGLCHHG---KTELAMEKFDELAESGLLPDDSTFNSII 563
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 42/152 (27%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I GLC + E A F+E+ GL PD+ T++S+ +C G EKA +
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV-----EKAFEFY 579
Query: 62 SEMIDSGFSPS----------------------------------VVEYNKLIHSYCSWG 87
+E I F P V YN +I ++C
Sbjct: 580 NESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCK-- 637
Query: 88 WEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
++ +++A ++L M E+GL PD +Y++ IS
Sbjct: 638 -DKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++ + + R + + + +MK+ GL P+ TY++L + +C G ++A +++
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSL-----KEAFQIV 298
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M + P + YN LI+ C+ G + + +E++ +M L PD +Y+ +I
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAG---SMREGLELMDAMKSLKLQPDVVTYNTLI 352
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRK-GLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
N ++ G C+E + E+A + E M + + PD TY+++ G + ++
Sbjct: 208 NVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDL-----KEL 262
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
L +M +G P+ V YN L++ YC G +++A +I+ M + + PD +Y+ +I+
Sbjct: 263 LLDMKKNGLVPNRVTYNNLVYGYCKLG---SLKEAFQIVELMKQTNVLPDLCTYNILIN 318
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I GLC+ R +A+ F+ M KG P+ TY++L FC + ++ K+
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV-----DEGMKLF 339
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPD 110
M GF+ + YN LIH YC G + A++I M R ++PD
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVG---KLRVALDIFCWMVSRRVTPD 385
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GLC A + EM++KGL D TY++L C Y+ WS+ A ++L
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC----YSGRWSDAA-RML 234
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+M+ +P VV + LI + G +++A E+ + M + + P+ +Y+++I+
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQG---NLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ GLC R +A + +M ++ + PD T+++L +F G ++A ++
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNL-----DEAQELY 269
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EMI S P+ V YN +I+ C G +K +++ S +G P+ +Y+ +IS F
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS---KGCFPNVVTYNTLISGF 326
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I C R A +V +M + G P T+ SL H FC +S ++
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS-----LVIL 166
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M+ SG+ P+VV YN LI C G + A+E+L M ++GL D +Y+ +++
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNG---ELNIALELLNEMEKKGLGADVVTYNTLLT 219
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 33/147 (22%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCD------------W--- 46
N +I G C R +E +F+ M +G D TY++L H +C W
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 47 ---------------GFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
G + E A +M +S +V YN +IH C +
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK---ADK 436
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVI 118
VEKA E+ +P G+ PDA +Y+ +I
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMI 463
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA++ LC + +F+EM GL PD +++ H +CD G S + KVL
Sbjct: 247 NALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAY-----KVL 301
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M P+V +N +I + C E V+ A +L M ++G +PD +Y+++++
Sbjct: 302 DRMKRYDLVPNVYTFNHIIKTLCK---NEKVDDAYLLLDEMIQKGANPDTWTYNSIMA 356
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+ LC + ++A + +EM +KG PD TY+S+ CD +A K+L
Sbjct: 317 NHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHC-----EVNRATKLL 371
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
S M + P YN ++ G ++A EI M ER P +Y+ +I
Sbjct: 372 SRMDRTKCLPDRHTYNMVLKLLIRIG---RFDRATEIWEGMSERKFYPTVATYTVMI 425
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
++ ++ LC ++ A+ F + K G+ P KTYS L G+ + A KV
Sbjct: 176 LDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVR-----GWARIRDASGARKV 230
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
EM++ ++ YN L+ + C G V+ ++ + M GL PDA S++ I
Sbjct: 231 FDEMLERNCVVDLLAYNALLDALCKSG---DVDGGYKMFQEMGNLGLKPDAYSFAIFIHA 287
Query: 121 F 121
+
Sbjct: 288 Y 288
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+++G ++AE++ EM+++G++PDE TYS L + + G + E A VL
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW-----ESARIVL 397
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWG-WEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
EM P+ +++L+ + G W +K ++L+ M G+ PD + Y+ VI
Sbjct: 398 KEMEAGDVQPNSFVFSRLLAGFRDRGEW----QKTFQVLKEMKSIGVKPDRQFYNVVIDT 453
Query: 121 FGQ 123
FG+
Sbjct: 454 FGK 456
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I + R ++ + + +MK +G+ P+ T+++L ++ G + A + L
Sbjct: 518 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF-----NDAIECL 572
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM G PS YN LI++Y G E+AV R M GL P + +++I+ F
Sbjct: 573 EEMKSVGLKPSSTMYNALINAYAQRGLS---EQAVNAFRVMTSDGLKPSLLALNSLINAF 629
Query: 122 GQ 123
G+
Sbjct: 630 GE 631
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I C R AE +FE M+R+G P TY+ + + + D W + ++L
Sbjct: 483 NTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD----QERWDD-MKRLL 537
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M G P+VV + L+ Y G A+E L M GL P + Y+ +I+ +
Sbjct: 538 GKMKSQGILPNVVTHTTLVDVY---GKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Query: 122 GQ 123
Q
Sbjct: 595 AQ 596
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 13 RKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPS 72
R +A EEMK GL P Y++L + + G SE+A M G PS
Sbjct: 564 RFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL-----SEQAVNAFRVMTSDGLKPS 618
Query: 73 VVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++ N LI+++ G + +A +L+ M E G+ PD +Y+ ++
Sbjct: 619 LLALNSLINAF---GEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 661
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++++ LC + R EA + EM K + PD T ++L + +C S A KV
Sbjct: 346 NSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS-----AVKVK 400
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+MI+SG + Y LIH +C +E A E L SM E+G SP +YS ++ F
Sbjct: 401 KKMIESGLKLDMYSYKALIHGFCKV---LELENAKEELFSMIEKGFSPGYATYSWLVDGF 457
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+I G C +EA + E M+ +G +P TY+S+ C+ G +A+++L
Sbjct: 311 TTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRI-----REANRLL 365
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+EM P + N LI++YC E + AV++ + M E GL D SY +I F
Sbjct: 366 TEMSGKKIEPDNITCNTLINAYCKI---EDMVSAVKVKKKMIESGLKLDMYSYKALIHGF 422
Query: 122 GQIWEL 127
++ EL
Sbjct: 423 CKVLEL 428
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
++ L +R + +F++M + G+ + Y+ L H G EKA+K+L
Sbjct: 172 TVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGD-----PEKAEKLL 226
Query: 62 SEMIDSGFSPSVVEYNKLIHSYC--SWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
SEM + G P + YN LI YC S +E A+ + M G++P+ +Y++ I
Sbjct: 227 SEMEEKGVFPDIFTYNTLISVYCKKSMHFE-----ALSVQDRMERSGVAPNIVTYNSFIH 281
Query: 120 KFGQ 123
F +
Sbjct: 282 GFSR 285
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 39/146 (26%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
E+AE + EM+ KG+ PD TY++L ++C + S V M SG +P++V
Sbjct: 220 EKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALS-----VQDRMERSGVAPNIV 274
Query: 75 EYNKLIHSYCSWG-------------------------------WEEGVEKAVEILRSMP 103
YN IH + G +++A+ + M
Sbjct: 275 TYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVME 334
Query: 104 ERGLSPDAESYSNVISKF---GQIWE 126
RG SP +Y++++ K G+I E
Sbjct: 335 SRGFSPGVVTYNSILRKLCEDGRIRE 360
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADK-- 59
+IQ LC R EEA VF EM+R D TY++L FC WG K DK
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG--------KIDKCY 377
Query: 60 -VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
VL +MI G PS + Y +H + +E E+ +E++ M + PD Y+ VI
Sbjct: 378 IVLDDMIKKGLMPSELTY---MHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVI 434
Query: 119 S---KFGQIWE 126
K G++ E
Sbjct: 435 RLACKLGEVKE 445
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
++ LC ++A +FE+M+ + + + ++SL + +C G +A VL +
Sbjct: 224 LLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMM-----EAKYVLVQ 277
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
M ++GF P +V+Y L+ Y + G + A ++LR M RG P+A Y+ +I +
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAG---KMADAYDLLRDMRRRGFEPNANCYTVLIQALCK 334
Query: 124 I 124
+
Sbjct: 335 V 335
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ L R +A+ VF++MK+K PD K+Y+ L WG + + D+V
Sbjct: 201 NRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE---GWGQELNLL--RVDEVN 255
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM D GF P VV Y +I+++C + E+A+ M +R P + ++I+
Sbjct: 256 REMKDEGFEPDVVAYGIIINAHCK---AKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGL 312
Query: 122 G 122
G
Sbjct: 313 G 313
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA++ C +R E+A +EM+ KG+ P+ +TY + H S++A +V
Sbjct: 341 NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILH-----HLIRMQRSKEAYEVY 395
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M P+V Y ++ +C+ +E ++ A++I M +G+ P +S++I+
Sbjct: 396 QTM---SCEPTVSTYEIMVRMFCN---KERLDMAIKIWDEMKGKGVLPGMHMFSSLIT 447
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDW--GFYASYWSEKADKVL 61
+I C ++ EEA F EM+++ P H+FC G + A +
Sbjct: 273 IINAHCKAKKYEEAIRFFNEMEQRNCKPSP-------HIFCSLINGLGSEKKLNDALEFF 325
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
SGF YN L+ +YC W + +E A + + M +G+ P+A +Y ++
Sbjct: 326 ERSKSSGFPLEAPTYNALVGAYC---WSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 33/147 (22%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWG-FYASYW--SEKAD 58
+ ++ GLC R +EA ++F +MK GL+PD YS + H C G F + W E D
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 59 K---------------------------VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
K +L +I SG + +V YN +I Y G
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC--- 483
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVI 118
+E+A+E+ + + E G++P +++++I
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLI 510
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 14/108 (12%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSL---FHLFCDWGFYASYWSEKAD 58
N +I GLC+ EA + +M + G+ PD TY+ L FHL G + W
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL---GMISGAW----- 312
Query: 59 KVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERG 106
+V+ +M+D G SP V+ Y L+ C G ++ + +L+ M RG
Sbjct: 313 EVIRDMLDKGLSPDVITYTILLCGQCQLG---NIDMGLVLLKDMLSRG 357
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ V+ GLC +++ E+A + K + P +++S+ +C GF + A
Sbjct: 191 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV-----DMAKSFF 245
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
++ G PSV +N LI+ C G + +A+E+ M + G+ PD+ +Y N+++K
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVG---SIAEALELASDMNKHGVEPDSVTY-NILAK 300
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I G C + EA + + +K GLAP +Y++L + + G ++ D++
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG-----NTKSIDELR 561
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGW----------EEGVEKAVEILRSMPERGLSPDA 111
EM G P+ V Y+ + C GW E EK + LR M G+ PD
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCR-GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620
Query: 112 ESYSNVISKFGQIWEL 127
+Y+ +I ++ L
Sbjct: 621 ITYNTIIQYLCRVKHL 636
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N VI G EEA +F+ + G+ P T++SL + +C A +A K+L
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA-----EARKIL 526
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ G +PSVV Y L+ +Y + G + ++ E+ R M G+ P +YS +
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSID---ELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 122 GQIWE 126
+ W+
Sbjct: 584 CRGWK 588
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +IQ LC + A E MK + L TY+ L C +G+ KAD +
Sbjct: 624 NTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI-----RKADSFI 678
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ + S S Y LI ++C G E AV++ + RG + YS VI++
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKG---DPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A++ GLC + EA ++ + + G D Y+ + G+ S E+A ++
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID-----GYAKSGCIEEALELFK 492
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
+I++G +PSV +N LI+ YC + + +A +IL + GL+P SY+ ++ +
Sbjct: 493 VVIETGITPSVATFNSLIYGYCK---TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 123 Q 123
Sbjct: 550 N 550
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I GLC R +AE EM K + P+ T+S+L + G + K D V
Sbjct: 88 SLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLS-----KVDSVYK 142
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI P+V Y+ LI+ C V++A+++L M +G +P+ +YS + + F
Sbjct: 143 MMIQMSIDPNVFTYSSLIYGLC---MHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I GLC+ R +EA + + M KG P+ TYS+L + GF+ S + K+L
Sbjct: 158 SLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLAN-----GFFKSSRVDDGIKLLD 212
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+M G + + V N LI Y G ++ A+ + M GL P+ SY+ V++
Sbjct: 213 DMPQRGVAANTVSCNTLIKGYFQAGK---IDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I LC R A V + MK +G++P+ TYSSL C G A A++ L E
Sbjct: 54 LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLAD-----AERRLHE 108
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M +P+V+ ++ LI +Y G V+ + + M + + P+ +YS++I
Sbjct: 109 MDSKKINPNVITFSALIDAYAKRGKLSKVD---SVYKMMIQMSIDPNVFTYSSLI 160
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A+I + + ++V++ M + + P+ TYSSL +G ++A K+L
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLI-----YGLCMHNRVDEAIKMLD 177
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
MI G +P+VV Y+ L + + V+ +++L MP+RG++ + S + +I +
Sbjct: 178 LMISKGCTPNVVTYSTLANGFFKSSR---VDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 234
Query: 123 QIWEL 127
Q ++
Sbjct: 235 QAGKI 239
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 33/147 (22%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWG-FYASYW--SEKAD 58
+ ++ GLC R +EA ++F +MK GL+PD YS + H C G F + W E D
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 59 K---------------------------VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
K +L +I SG + +V YN +I Y G
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC--- 483
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVI 118
+E+A+E+ + + E G++P +++++I
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLI 510
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 14/108 (12%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSL---FHLFCDWGFYASYWSEKAD 58
N +I GLC+ EA + +M + G+ PD TY+ L FHL G + W
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL---GMISGAW----- 312
Query: 59 KVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERG 106
+V+ +M+D G SP V+ Y L+ C G ++ + +L+ M RG
Sbjct: 313 EVIRDMLDKGLSPDVITYTILLCGQCQLG---NIDMGLVLLKDMLSRG 357
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ V+ GLC +++ E+A + K + P +++S+ +C GF + A
Sbjct: 191 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV-----DMAKSFF 245
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
++ G PSV +N LI+ C G + +A+E+ M + G+ PD+ +Y N+++K
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVG---SIAEALELASDMNKHGVEPDSVTY-NILAK 300
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I G C + EA + + +K GLAP +Y++L + + G ++ D++
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG-----NTKSIDELR 561
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGW----------EEGVEKAVEILRSMPERGLSPDA 111
EM G P+ V Y+ + C GW E EK + LR M G+ PD
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCR-GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620
Query: 112 ESYSNVISKFGQIWEL 127
+Y+ +I ++ L
Sbjct: 621 ITYNTIIQYLCRVKHL 636
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N VI G EEA +F+ + G+ P T++SL + +C A +A K+L
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA-----EARKIL 526
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ G +PSVV Y L+ +Y + G + ++ E+ R M G+ P +YS +
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSID---ELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 122 GQIWE 126
+ W+
Sbjct: 584 CRGWK 588
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +IQ LC + A E MK + L TY+ L C +G+ KAD +
Sbjct: 624 NTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI-----RKADSFI 678
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ + S S Y LI ++C G E AV++ + RG + YS VI++
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKG---DPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A++ GLC + EA ++ + + G D Y+ + G+ S E+A ++
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID-----GYAKSGCIEEALELFK 492
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
+I++G +PSV +N LI+ YC + + +A +IL + GL+P SY+ ++ +
Sbjct: 493 VVIETGITPSVATFNSLIYGYCK---TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 123 Q 123
Sbjct: 550 N 550
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I GLC R EEA + ++M KG P +TY+ L CD G +KA + E
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI-----DKAFNLFDE 326
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
MI G P+V Y LI C G +E+A + R M + + P +Y+ +I+ +
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDG---KIEEANGVCRKMVKDRIFPSVITYNALINGY 381
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+I G C + R A + M+++ P+ +T++ L C G Y KA +L
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG--KPY---KAVHLL 429
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M+D+G SP +V YN LI C E + A ++L SM + PD +++ +I+ F
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCR---EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 20 VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKL 79
+ E MK G P+ Y+ + + C +G E+A+K+LS M DSG SP+ V Y +
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRV-----EEAEKLLSAMQDSGVSPNHVTYTVM 657
Query: 80 IHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ Y + G +++A+E +R+M ERG + YS+++ F
Sbjct: 658 VKGYVNNG---KLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRK-GLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+++ G C +A VF+ M ++ AP+ +YS L H C+ G E+A +
Sbjct: 235 SLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL-----EEAFGLK 289
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M + G PS Y LI + C G ++KA + M RG P+ +Y+ +I
Sbjct: 290 DQMGEKGCQPSTRTYTVLIKALCDRGL---IDKAFNLFDEMIPRGCKPNVHTYTVLI 343
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++ GLC E R +EA + +EM+ +G +P Y+ L C G + K++
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLT-----RVTKLVD 281
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M G P+ V YN LIH C G ++KAV +L M P+ +Y +I+
Sbjct: 282 NMFLKGCVPNEVTYNTLIHGLCLKG---KLDKAVSLLERMVSSKCIPNDVTYGTLIN 335
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I GLC R +EA V+ +M G+ PD YSS+ C G + A K+
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIG-----SMDAALKLY 525
Query: 62 SEMI---DSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM+ + P VV YN L+ C ++ + +AV++L SM +RG PD + + +
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLC---MQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582
Query: 119 SKFGQ 123
+ +
Sbjct: 583 NTLSE 587
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ ++ GLC E + EA+ + M G P+ TYSSL GF+ + E+A +V
Sbjct: 401 SVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK-----GFFKTGLCEEAVQVW 455
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM +G S + Y+ LI C G V++A+ + M G+ PD +YS++I
Sbjct: 456 KEMDKTGCSRNKFCYSVLIDGLCGVGR---VKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Query: 122 GQIWEL 127
I +
Sbjct: 513 CGIGSM 518
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GLC + + + M KG P+E TY++L H C G +KA +L
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL-----DKAVSLL 315
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M+ S P+ V Y LI+ + AV +L SM ERG + YS +IS
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVK---QRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADK-- 59
N VI+ LC R + A VF M + PD TY +L C E+ D+
Sbjct: 191 NLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK--------EERIDEAV 242
Query: 60 -VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+L EM G SPS V YN LI C G V K V+ +M +G P+ +Y+ +I
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVD---NMFLKGCVPNEVTYNTLI 299
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+I GL +RR +A + M+ +G ++ YS L G + +E+A +
Sbjct: 332 TLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS-----GLFKEGKAEEAMSLWR 386
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M + G P++V Y+ L+ C G +A EIL M G P+A +YS+++ F
Sbjct: 387 KMAEKGCKPNIVVYSVLVDGLCREGKPN---EAKEILNRMIASGCLPNAYTYSSLMKGF 442
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I GL E + EEA +++ +M KG P+ YS L C G +A ++L
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG-----KPNEAKEIL 420
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ MI SG P+ Y+ L+ + G E+AV++ + M + G S + YS +I
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGL---CEEAVQVWKEMDKTGCSRNKFCYSVLI 474
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 32/148 (21%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GLC + +EA +F + GL PD +TY+ + F G +A+K+
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLG--------RAEKLY 68
Query: 62 SEMIDSGFSPSVVEYNKLIHSYC-----------------------SWGWEEGVEKAVEI 98
+EMI G P + YN +IH C + V+ + +
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNL 128
Query: 99 LRSMPERGLSPDAESYSNVISKFGQIWE 126
M RG+ + +Y+ +I F Q+ +
Sbjct: 129 FCEMYRRGIVANVITYTTLIHGFRQVGD 156
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 59.3 bits (142), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
++QG C + + AE +F+EM G+ PD TY L CD G EKA ++ +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL-----EKALEIFED 463
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+ S +V Y +I C G VE A + S+P +G+ P+ +Y+ +IS
Sbjct: 464 LQKSKMDLGIVMYTTIIEGMCKGG---KVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ E + +EA +++EM +G++P+ TY++L +C + SE A+ +L
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC----MQNRLSE-ANNML 356
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M+ + SP +V + LI YC + V+ +++ R++ +RGL +A +YS ++ F
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYC---MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 122 GQ 123
Q
Sbjct: 414 CQ 415
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I+G C+ +R ++ VF + ++GL + TYS L FC G + A+++
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI-----KLAEELFQ 427
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM+ G P V+ Y L+ C G +EKA+EI + + + Y+ +I
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNG---KLEKALEIFEDLQKSKMDLGIVMYTTII 480
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++++GLC + + + ++M + + P+ T++ L +F G ++A+++
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL-----QEANELY 321
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EMI G SP+++ YN L+ YC + + +A +L M SPD +++++I +
Sbjct: 322 KEMITRGISPNIITYNTLMDGYC---MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I LC + + A ++F+EM+ KG+ TY+SL C A W++ A +L
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK----AGKWNDGA-LLL 286
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M+ P+V+ +N L+ + E +++A E+ + M RG+SP+ +Y+ ++ +
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVK---EGKLQEANELYKEMITRGISPNIITYNTLMDGY 343
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKAD--- 58
N ++ G C++ R EA + + M R +PD T++SL +C ++ D
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC--------MVKRVDDGM 388
Query: 59 KVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
KV + G + V Y+ L+ +C G ++ A E+ + M G+ PD +Y
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSG---KIKLAEELFQEMVSHGVLPDVMTY 441
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 58.9 bits (141), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 33/147 (22%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYS----SLFHL--------FCD---- 45
N +I G C +++ +EA +EM ++GL PD TYS LF++ F D
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 46 --------------WGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
G + +E+ + EM+ P+ V YN LI +YC G
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG---R 660
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVI 118
+ A+E+ M +G+SP++ +Y+++I
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLI 687
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N VI GL + R +EA E+M +G+ P TYS L G + A VL
Sbjct: 299 NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK-----GLTRAKRIGDAYFVL 353
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM GF P+V+ YN LI S+ G + KA+EI M +GLS + +Y+ +I +
Sbjct: 354 KEMTKKGFPPNVIVYNNLIDSFIEAG---SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I+G+ + R EEA+ +FEEM+ +GL P+ Y++L + G K + +L
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV-----KVECLLR 739
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM P+ + Y +I Y G V +A +L M E+G+ PD+ +Y I
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDG---NVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I G C R EE + F+EM K + P+ Y+ L +C G + A ++
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS-----MALELR 668
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M G SP+ Y LI VE+A + M GL P+ Y+ +I +
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSII---SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 122 GQIWEL 127
G++ ++
Sbjct: 726 GKLGQM 731
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+ +I GLC + +A ++ + KG D +T ++L H C+ G ++A ++
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL-----DEAFRI 527
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
E++ G V YN LI C ++ +++A L M +RGL PD +YS +I
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCG---KKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+++GL +R +A V +EM +KG P+ Y++L F + G KA ++
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL-----NKAIEIKDL 390
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M+ G S + YN LI YC G + E+ +L+ M G + + S+++VI
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAER---LLKEMLSIGFNVNQGSFTSVI 442
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 58.9 bits (141), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 33/147 (22%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYS----SLFHL--------FCD---- 45
N +I G C +++ +EA +EM ++GL PD TYS LF++ F D
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 46 --------------WGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
G + +E+ + EM+ P+ V YN LI +YC G
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG---R 660
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVI 118
+ A+E+ M +G+SP++ +Y+++I
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLI 687
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N VI GL + R +EA E+M +G+ P TYS L G + A VL
Sbjct: 299 NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK-----GLTRAKRIGDAYFVL 353
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM GF P+V+ YN LI S+ G + KA+EI M +GLS + +Y+ +I +
Sbjct: 354 KEMTKKGFPPNVIVYNNLIDSFIEAG---SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I+G+ + R EEA+ +FEEM+ +GL P+ Y++L + G K + +L
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV-----KVECLLR 739
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM P+ + Y +I Y G V +A +L M E+G+ PD+ +Y I
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDG---NVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I G C R EE + F+EM K + P+ Y+ L +C G + A ++
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS-----MALELR 668
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M G SP+ Y LI VE+A + M GL P+ Y+ +I +
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSII---SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 122 GQIWEL 127
G++ ++
Sbjct: 726 GKLGQM 731
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+ +I GLC + +A ++ + KG D +T ++L H C+ G ++A ++
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL-----DEAFRI 527
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
E++ G V YN LI C ++ +++A L M +RGL PD +YS +I
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCG---KKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+++GL +R +A V +EM +KG P+ Y++L F + G KA ++
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL-----NKAIEIKDL 390
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M+ G S + YN LI YC G + E+ +L+ M G + + S+++VI
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAER---LLKEMLSIGFNVNQGSFTSVI 442
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 58.9 bits (141), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I GLC+ +EA +F M+R G P+E Y++L H FC S E K+
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK-----SKRVEDGMKIFY 352
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
EM G + + Y LI YC G + A E+ M R PD +Y+
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRP---DVAQEVFNQMSSRRAPPDIRTYN 402
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N V+ +C+ + A +M + G PD T++SL + +C W E A +
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI-----EDAIALF 176
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+++ GF P+VV Y LI C + AVE+ M G P+ +Y+ +++
Sbjct: 177 DQILGMGFKPNVVTYTTLIRCLCK---NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 122 GQI 124
+I
Sbjct: 234 CEI 236
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+IQG C+ R + A+ VF +M + PD +TY+ L C G EKA +
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV-----EKALMIFEY 423
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M ++V Y +I C G VE A ++ S+ +G+ P+ +Y+ +IS F
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLG---KVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+++ G C R E+A A+F+++ G P+ TY++L C + A ++ +
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK-----NRHLNHAVELFN 212
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWG-WEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M +G P+VV YN L+ C G W + A +LR M +R + P+ +++ +I F
Sbjct: 213 QMGTNGSRPNVVTYNALVTGLCEIGRWGD----AAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 122 GQIWEL 127
++ +L
Sbjct: 269 VKVGKL 274
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ GLC + E+A +FE M+++ + + TY+ + C G E A +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV-----EDAFDLF 456
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
+ G P+V+ Y +I +C G + +A + + M E G P+ Y
Sbjct: 457 CSLFSKGMKPNVITYTTMISGFCRRGL---IHEADSLFKKMKEDGFLPNESVY 506
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 17/125 (13%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+ LC + R +A + +EM ++G PD TY LF EK ++L
Sbjct: 298 NTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL-----------EKPSEIL 346
Query: 62 S---EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
S MI SG P + Y L+ + WG+ ++ + + ++M E G +PD+ +Y+ VI
Sbjct: 347 SLFGRMIRSGVRPKMDTYVMLMRKFERWGF---LQPVLYVWKTMKESGDTPDSAAYNAVI 403
Query: 119 SKFGQ 123
Q
Sbjct: 404 DALIQ 408
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I C EA+ +F+ M +GL PD TY+ + H +C +KA+ + +
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNEL-----QKAESLFED 651
Query: 64 MIDSGFSPSVVEYNKLI----------HSYCSWGWEEGVEKAVEILRSMPERGLSPDAES 113
M G P VV Y L+ H CS E G KA E+LR G+ D
Sbjct: 652 MKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVC 711
Query: 114 YSNVISK 120
Y+ +I +
Sbjct: 712 YTVLIDR 718
Score = 55.8 bits (133), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N L R EEA + +EMK +G+ PD Y++L +C G A ++
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVD-----ALDLI 446
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EMI +G SP ++ YN L+ G EE V +EI M G P+A + S +I
Sbjct: 447 DEMIGNGMSPDLITYNVLVSGLARNGHEEEV---LEIYERMKAEGPKPNAVTNSVII 500
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 8 LCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDS 67
LC+E E+A V ++M + P + FC +A + M++
Sbjct: 566 LCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNV-----REAQVLFDTMVER 620
Query: 68 GFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
G P + Y +IH+YC ++KA + M +RG+ PD +Y+ ++ ++
Sbjct: 621 GLIPDLFTYTIMIHTYCRL---NELQKAESLFEDMKQRGIKPDVVTYTVLLDRY 671
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
++Q C EA F+E + + D Y+ F G E+A ++L E
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRV-----EEAFELLQE 413
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
M D G P V+ Y LI YC G V A++++ M G+SPD +Y+ ++S +
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQG---KVVDALDLIDEMIGNGMSPDLITYNVLVSGLAR 470
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+++ LC + A A+ M RKGL PD++TY+ L + +C G ++A + L
Sbjct: 186 NSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAG-----KMKEAQEFL 240
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS---NVI 118
EM GF+P + LI + G+ +E A E++ M + G PD ++++ I
Sbjct: 241 DEMSRRGFNPPARGRDLLIEGLLNAGY---LESAKEMVSKMTKGGFVPDIQTFNILIEAI 297
Query: 119 SKFGQI 124
SK G++
Sbjct: 298 SKSGEV 303
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 33/156 (21%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCD---------------- 45
N +I G C RR +EAE +FE +K P+ T + L H+ C
Sbjct: 611 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 670
Query: 46 ---------WGFYASYWSEKAD-----KVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
+G ++S+ D K+ EM + G SPS+V Y+ +I C G
Sbjct: 671 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG---R 727
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVISKFGQIWEL 127
V++A I + L PD +Y+ +I + ++ L
Sbjct: 728 VDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 763
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 55 EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
E A ++LS ++D G +P+VV + LI+ +C G +++A ++ + M +RG+ PD +Y
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRG---EMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 115 SNVISKF 121
S +I +
Sbjct: 325 STLIDGY 331
Score = 45.8 bits (107), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I+GLC + R EA ++ ++ ++G+ P TYSSL FC G S ++ + +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA-----LYED 451
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWG 87
MI G+ P VV Y L+ G
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQG 475
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 33/156 (21%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCD---------------- 45
N +I G C RR +EAE +FE +K P+ T + L H+ C
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 46 ---------WGFYASYWSEKAD-----KVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
+G ++S+ D K+ EM + G SPS+V Y+ +I C G
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG---R 756
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVISKFGQIWEL 127
V++A I + L PD +Y+ +I + ++ L
Sbjct: 757 VDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 55 EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
E A ++LS ++D G +P+VV + LI+ +C G +++A ++ + M +RG+ PD +Y
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRG---EMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 115 SNVISKF 121
S +I +
Sbjct: 325 STLIDGY 331
Score = 45.8 bits (107), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I+GLC + R EA ++ ++ ++G+ P TYSSL FC G S ++ + +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA-----LYED 451
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWG 87
MI G+ P VV Y L+ G
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQG 475
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I+ LC R+ EEA+ VF+EM KGL P +TY + + E+ ++L
Sbjct: 377 NSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL--------RTGEEVFELL 428
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
++M G P+V Y LI C W + + + M E+ + PD SY +I
Sbjct: 429 AKMRKMGCEPTVETYIMLIRKLCRW---RDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 20 VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKL 79
+F+ MK++ + PD K Y+++ H AS+ SE + + + + G P+VV YN L
Sbjct: 324 LFDRMKKECIEPDRKVYNAVVHALAK----ASFVSEARNLMKTMEEEKGIEPNVVTYNSL 379
Query: 80 IHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
I C E+A ++ M E+GL P +Y
Sbjct: 380 IKPLCK---ARKTEEAKQVFDEMLEKGLFPTIRTY 411
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKR-KGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
NAV+ L EA + + M+ KG+ P+ TY+SL C + +E+A +V
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC-----KARKTEEAKQV 395
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
EM++ G P++ Y+ + + E+ E+L M + G P E+Y +I K
Sbjct: 396 FDEMLEKGLFPTIRTYHAFMRILRTG------EEVFELLAKMRKMGCEPTVETYIMLIRK 449
Query: 121 F 121
Sbjct: 450 L 450
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C + +EA VF EMK +AP+ TY++L + + G + E A +
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH-----EMAFRFY 366
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M+ +G ++ YN LI C + KA + ++ + + L P++ ++S +I
Sbjct: 367 EDMVCNGIQRDILTYNALIFGLCK---QAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N V+ G C + ++ + ++M+R G + +Y++L C+ G +S A K+
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSS-----ALKL 295
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
+ M SG P+VV +N LIH +C +++A ++ M ++P+ +Y+ +I+
Sbjct: 296 KNMMGKSGLQPNVVTFNTLIHGFCR---AMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 121 FGQ 123
+ Q
Sbjct: 353 YSQ 355
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C + +EA VF EMK +AP+ TY++L + + G + E A +
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH-----EMAFRFY 366
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+M+ +G ++ YN LI C + KA + ++ + + L P++ ++S +I
Sbjct: 367 EDMVCNGIQRDILTYNALIFGLCK---QAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N V+ G C + ++ + ++M+R G + +Y++L C+ G +S A K+
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSS-----ALKL 295
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
+ M SG P+VV +N LIH +C +++A ++ M ++P+ +Y+ +I+
Sbjct: 296 KNMMGKSGLQPNVVTFNTLIHGFCR---AMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 121 FGQ 123
+ Q
Sbjct: 353 YSQ 355
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C +EA +F++M+ PD TY+++ C G + A VL
Sbjct: 213 NTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV-----KIAHNVL 267
Query: 62 SEMID--SGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
S M+ + P+VV Y L+ YC ++ +++AV + M RGL P+A +Y+ +I
Sbjct: 268 SGMLKKATDVHPNVVSYTTLVRGYC---MKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIK 324
Query: 120 KFGQ 123
+
Sbjct: 325 GLSE 328
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+++G C+++ +EA VF +M +GL P+ TY++L G ++ ++ +L
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIK-----GLSEAHRYDEIKDILIG 341
Query: 64 MID--SGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
D + F+P +N LI ++C G ++ A+++ + M L PD+ SYS +I
Sbjct: 342 GNDAFTTFAPDACTFNILIKAHCDAG---HLDAAMKVFQEMLNMKLHPDSASYSVLI 395
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++G C + EA V+++MK +G+ PD+ TY++L +G + E+A L
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI-----FGLSKAGRVEEARMYL 323
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWG 87
M+D+G+ P Y L++ C G
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 14/124 (11%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+++ GL AEAV M+ K D TY++L + G E+AD +L
Sbjct: 505 NSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTG-----NVEEADDIL 555
Query: 62 SEMI--DSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
S+M D S S+V +N +I+ C +G EKA E+L+ M ERG+ PD+ +Y +I+
Sbjct: 556 SKMQKQDGEKSVSLVTFNIMINHLCKFG---SYEKAKEVLKFMVERGVVPDSITYGTLIT 612
Query: 120 KFGQ 123
F +
Sbjct: 613 SFSK 616
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+VI G C R + AE + +M + G+ +E+TY +L + G S++A ++
Sbjct: 295 NSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAG-----SSDEALRLC 349
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEG-VEKAVEILRSMPERGLSPDAESYSNVI 118
EM G + V YN +++ W + EG +E A+ +LR M + + D + + V+
Sbjct: 350 DEMTSKGLVVNTVIYNSIVY----WLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVV 403
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 34/153 (22%)
Query: 2 NAVIQGLCVER-RKEEAEAVFEEMKRKGLAPDEKTYSSLFHLF-------CDWGFYASYW 53
NA I+GL + EEA VF+ MKR P +TY+ + +L+ W Y
Sbjct: 232 NAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMR 291
Query: 54 S-----------------------EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEE 90
S EKA+++ ++ + G P V YN L+ SY G+
Sbjct: 292 SHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPY 351
Query: 91 GVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
G A EI M G PD SY+ ++ +G+
Sbjct: 352 G---AAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
+AEAVFEEMKR G+AP K+ H+ + + K + ++ EM ++G P
Sbjct: 387 DAEAVFEEMKRLGIAPTMKS-----HMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 441
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
N +++ Y G +EK IL M + D +Y+ +I+ +G+
Sbjct: 442 LNSMLNLYGRLGQFTKMEK---ILAEMENGPCTADISTYNILINIYGK 486
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 12 RRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSP 71
R + EA+ +EM G+ PD +S+ +L+ G + K +K+L+EM + +
Sbjct: 418 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT-----KMEKILAEMENGPCTA 472
Query: 72 SVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
+ YN LI+ Y G+ E +E E+ + E+ PD ++++ I + +
Sbjct: 473 DISTYNILINIYGKAGFLERIE---ELFVELKEKNFRPDVVTWTSRIGAYSR 521
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 34/153 (22%)
Query: 2 NAVIQGLCVER-RKEEAEAVFEEMKRKGLAPDEKTYSSLFHLF-------CDWGFYASYW 53
NA I+GL + EEA VF+ MKR P +TY+ + +L+ W Y
Sbjct: 254 NAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMR 313
Query: 54 S-----------------------EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEE 90
S EKA+++ ++ + G P V YN L+ SY G+
Sbjct: 314 SHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPY 373
Query: 91 GVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
G A EI M G PD SY+ ++ +G+
Sbjct: 374 G---AAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
+AEAVFEEMKR G+AP K+ H+ + + K + ++ EM ++G P
Sbjct: 409 DAEAVFEEMKRLGIAPTMKS-----HMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 463
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
N +++ Y G +EK IL M + D +Y+ +I+ +G+
Sbjct: 464 LNSMLNLYGRLGQFTKMEK---ILAEMENGPCTADISTYNILINIYGK 508
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 12 RRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSP 71
R + EA+ +EM G+ PD +S+ +L+ G + K +K+L+EM + +
Sbjct: 440 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT-----KMEKILAEMENGPCTA 494
Query: 72 SVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
+ YN LI+ Y G+ E +E E+ + E+ PD ++++ I + +
Sbjct: 495 DISTYNILINIYGKAGFLERIE---ELFVELKEKNFRPDVVTWTSRIGAYSR 543
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ C R +EA +++ M R+ + PD TY+SL C G +A +
Sbjct: 275 NTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDG-----RVREAHQTF 329
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M+D G P + YN LI++YC G ++++ ++L M + PD + ++ F
Sbjct: 330 HRMVDRGIKPDCMSYNTLIYAYCKEGM---MQQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 20 VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKL 79
V+ M R G+ P+ T++ L ++FC+ + + D L +M + GF P +V YN L
Sbjct: 223 VYSVMCRVGIHPNTYTFNILTNVFCNDSNF-----REVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 80 IHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI---SKFGQIWE 126
+ SYC G +++A + + M R + PD +Y+++I K G++ E
Sbjct: 278 VSSYCRRGR---LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVRE 324
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++ LC + E A V +E+ GL P+ TY+++ G+ A E A +VL
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTIL-----GGYVARGDMESAKRVL 249
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM+D G+ P Y L+ YC G +A ++ M + + P+ +Y +I
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGR---FSEAATVMDDMEKNEIEPNEVTYGVMI 303
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 12/126 (9%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
VI LC + + +EA ++ +M + PD S+L H C G +A K+ E
Sbjct: 337 VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVT-----EARKLFDE 391
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI---SK 120
+ G PS++ YN LI C G + +A + M ER P+A +Y+ +I SK
Sbjct: 392 -FEKGSIPSLLTYNTLIAGMCEKG---ELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSK 447
Query: 121 FGQIWE 126
G + E
Sbjct: 448 NGNVKE 453
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+++ GLC R ++A + +EMK KG+ D Y +L FC E A + S
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM-----ESASALFS 678
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
E+++ G +PS YN LI + + G + A+++ + M + GL D +Y+ +I
Sbjct: 679 ELLEEGLNPSQPIYNSLISGFRNLG---NMVAALDLYKKMLKDGLRCDLGTYTTLI 731
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I G E + A A +EEM G++P+ TY+SL + C + ++A ++
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC-----KNNRMDQALEMR 642
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM + G + Y LI +C +E A + + E GL+P Y+++IS F
Sbjct: 643 DEMKNKGVKLDIPAYGALIDGFCK---RSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 122 GQIWEL 127
+ +
Sbjct: 700 RNLGNM 705
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N V+ G C ++ + A VF + KGL P+ TYS L G + ++ + A +V+
Sbjct: 482 NNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID-----GCFRNHDEQNALEVV 536
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSM-PERGLSPDAESYSNVISK 120
+ M S + V Y +I+ C G KA E+L +M E+ L SY+++I
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQ---TSKARELLANMIEEKRLCVSCMSYNSIIDG 593
Query: 121 F 121
F
Sbjct: 594 F 594
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
++ +IQG ++ EEA +F+E GLA + +++ C G +++A ++
Sbjct: 412 VHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQG-----KTDEATEL 465
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
LS+M G P+VV YN ++ +C ++ ++ A + ++ E+GL P+ +YS +I
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCR---QKNMDLARIVFSNILEKGLKPNNYTYSILI 520
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 8/105 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
++A +F +M + G +P+ TY+SL F D G ++A VLS++ G +P +V
Sbjct: 264 QKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMV-----DEAFTVLSKVQSEGLAPDIV 318
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
N +IH+Y G E+A ++ S+ +R L PD ++++++S
Sbjct: 319 LCNLMIHTYTRLGR---FEEARKVFTSLEKRKLVPDQYTFASILS 360
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 17 AEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEY 76
A VF+EM ++G + + Y+ + C+ G ++A+++LSEM +SG SP +
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDV-----KEAERLLSEMEESGVSPYDETF 377
Query: 77 NKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQI 124
N LI + +GWE EK +E M RGL P +++ ++ +I
Sbjct: 378 NCLIGGFARFGWE---EKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKI 422
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 3 AVIQGLCVERRK-EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
V +C E+ +EAE + EM+ G++P ++T++ L F +G W EK +
Sbjct: 343 TVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFG-----WEEKGLEYC 397
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M+ G PS +N+++ S E V +A EIL ++G PD +YS++I F
Sbjct: 398 EVMVTRGLMPSCSAFNEMVKSVSKI---ENVNRANEILTKSIDKGFVPDEHTYSHLIRGF 454
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
A + + KG PDE TYS L GF ++A K+ EM SP
Sbjct: 427 RANEILTKSIDKGFVPDEHTYSHLIR-----GFIEGNDIDQALKLFYEMEYRKMSPGFEV 481
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQIWE 126
+ LI C+ G E EK ++I M +R + P+A+ Y +I F +I +
Sbjct: 482 FRSLIVGLCTCGKVEAGEKYLKI---MKKRLIEPNADIYDALIKAFQKIGD 529
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I C E EEA+ +F EM KG+ P+ TY+ + + +C G ++A K+ +
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG-----KIKEARKLRAN 529
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M +G P Y LIH C + V++A+ + M +GL ++ +Y+ +IS
Sbjct: 530 MEANGMDPDSYTYTSLIHGEC---IADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G C + +EA +++ M++KG D T +++ F Y ++A + L
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY-----DEAKQWL 457
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI--- 118
M++ G S V Y LI YC G VE+A + M +G+ P+A +Y+ +I
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEG---NVEEAKRLFVEMSSKGVQPNAITYNVMIYAY 514
Query: 119 SKFGQIWE 126
K G+I E
Sbjct: 515 CKQGKIKE 522
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 9 CVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSG 68
C + + A +F+E+ KGL+P TY +L C G + A+ +++EM G
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA-----AEILMNEMQSKG 394
Query: 69 FSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQI 124
+ + V +N LI YC G V++A I M ++G D + + + S F ++
Sbjct: 395 VNITQVVFNTLIDGYCRKGM---VDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I +R E V + MK+ G+ ++ TY+ L L G + A+K+
Sbjct: 263 NTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD-----AEKLF 317
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEG-VEKAVEILRSMPERGLSPDAESYSNVISK 120
EM + G V Y LI SW +G +++A + + E+GLSP + +Y +I
Sbjct: 318 DEMRERGIESDVHVYTSLI----SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 121 FGQIWEL 127
++ E+
Sbjct: 374 VCKVGEM 380
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA+IQ LC + E A +FEEM R+G P+ TY+ L F+A +S + ++++
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL----FHAGEFS-RGEELM 358
Query: 62 SEMIDSGFSPSVVEYNKLIHSY--CSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M + G P+ YN +I Y CS VEKA+ + M P+ ++Y+ +IS
Sbjct: 359 QRMENEGCEPNFQTYNMMIRYYSECS-----EVEKALGLFEKMGSGDCLPNLDTYNILIS 413
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
V+ G V + A VF+EM R+G+ P TY+++ + C E A + E
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV-----ENAVVMFEE 325
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
M+ G+ P+V YN LI G + E+++ M G P+ ++Y+ +I + +
Sbjct: 326 MVRRGYEPNVTTYNVLIRGLFHAG---EFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382
Query: 124 IWEL 127
E+
Sbjct: 383 CSEV 386
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ LC +R E+A +F ++ + + D TY+ + + +C + KA +VL
Sbjct: 165 NTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWC-----LIKRTPKALEVL 218
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM++ G +P++ YN ++ + G + A E M +R D +Y+ V+ F
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAG---QIRHAWEFFLEMKKRDCEIDVVTYTTVVHGF 275
Query: 122 GQIWEL 127
G E+
Sbjct: 276 GVAGEI 281
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I L +EA F+EM+ KGL PD TYS+L F + E A +
Sbjct: 516 NSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGK-----TERVEMAYSLF 570
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
EM+ G P++V YN L+ G +AV++ M ++GL+PD+ +Y+
Sbjct: 571 EEMLVKGCQPNIVTYNILLDCLEKNG---RTAEAVDLYSKMKQQGLTPDSITYT 621
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N V L ++ +FE+MK+ G +PD TY+ L F G ++A +
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV-----DEAINIF 500
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
E+ S P ++ YN LI+ G V++A + M E+GL+PD +YS ++ F
Sbjct: 501 EELERSDCKPDIISYNSLINCL---GKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECF 557
Query: 122 GQ 123
G+
Sbjct: 558 GK 559
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 13 RKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPS 72
+ E+A VFE+MK++ DE TY+ + G ++A + +EMI G + +
Sbjct: 250 KDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIG-----KCDEAVGLFNEMITEGLTLN 304
Query: 73 VVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS---NVISKFGQIWEL 127
VV YN L+ + V+KA+++ M E G P+ +YS N++ GQ+ L
Sbjct: 305 VVGYNTLMQVLAK---GKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRL 359
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 13/111 (11%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
EAE +F E++ KG PD TY+SL + F +EK +V +M GF +
Sbjct: 350 EAERLFMELELKGFFPDAVTYNSLL-----YAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLS---PDAESYSNVISKFGQ 123
YN +IH Y G + ++ A+++ + M +GLS PDA +Y+ +I G+
Sbjct: 405 YNTIIHMY---GKQGQLDLALQLYKDM--KGLSGRNPDAITYTVLIDSLGK 450
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ + + A VFE+M+ PD TY+++ ++ G A +A+++
Sbjct: 301 NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA-----EAERLF 355
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
E+ GF P V YN L++++ E EK E+ + M + G D +Y+ +I +
Sbjct: 356 MELELKGFFPDAVTYNSLLYAFAR---ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 122 GQIWEL 127
G+ +L
Sbjct: 413 GKQGQL 418
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+++ ER E+ + V+++M++ G DE TY+++ H++ G + D L
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQG--------QLDLAL 422
Query: 62 SEMID----SGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
D SG +P + Y LI S G +A ++ M + G+ P ++YS +
Sbjct: 423 QLYKDMKGLSGRNPDAITYTVLID---SLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL 479
Query: 118 ISKFGQ 123
I + +
Sbjct: 480 ICGYAK 485
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
++AE+V +++ G PD KT++SL + G Y E+A + + M+ G SP+V
Sbjct: 769 QKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCY-----ERARAIFNTMMRDGPSPTVE 823
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSM 102
N L+H+ C G E + VE L+ M
Sbjct: 824 SINILLHALCVDGRLEELYVVVEELQDM 851
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I+ LC +R +AE + EM+ + ++S+ ++ Y +K +V
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY-----KKTVQVYQR 952
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
+ ++G P YN LI YC + E+ +++ M GL P ++Y ++IS FG+
Sbjct: 953 IKETGLEPDETTYNTLIIMYCR---DRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGK 1009
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
E+AE +FEE+ KGL D Y ++ + D G KA+K+L M ++G P++
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKISRDSG-----SDSKAEKLLQMMKNAGIEPTLA 1068
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ L+ SY S G + EK +L ++ + + YS+VI +
Sbjct: 1069 TMHLLMVSYSSSGNPQEAEK---VLSNLKDTEVELTTLPYSSVIDAY 1112
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 37/155 (23%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFC---------------DWGF 48
+I +C EAE +F E+++ G +P T+++L C + G
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473
Query: 49 YASYWSE-------------------KADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWE 89
AS + KA + L+ D+G SP +V YN LI+ +C G
Sbjct: 474 PASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAG-- 531
Query: 90 EGVEKAVEILRSMPERGLSPDAESYSNVISKFGQI 124
++ A+++L + +GLSPD+ +Y+ +I+ ++
Sbjct: 532 -DIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRV 565
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA++ G C R EA + ++ G + YSSL G + + +A ++
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID-----GLFRARRYTQAFELY 326
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ M+ P ++ Y LI G +E A+++L SMP +G+SPD Y+ VI
Sbjct: 327 ANMLKKNIKPDIILYTILIQGLSKAG---KIEDALKLLSSMPSKGISPDTYCYNAVI 380
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 55.8 bits (133), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 10/107 (9%)
Query: 20 VFEEMKRKGLA-PDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMID-SGFSPSVVEYN 77
V EEMKR G++ P+ TYS+L +A S++A ++ +MI G SP V +N
Sbjct: 218 VVEEMKRSGISYPNSITYSTLMDCL-----FAHSRSKEAVELFEDMISKEGISPDPVTFN 272
Query: 78 KLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQI 124
+I+ +C G VE+A +IL M + G +P+ +YS +++ F ++
Sbjct: 273 VMINGFCRAG---EVERAKKILDFMKKNGCNPNVYNYSALMNGFCKV 316
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 8 LCVERRKEEAEAVFEEM-KRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMID 66
L R +EA +FE+M ++G++PD T++ + + FC G E+A K+L M
Sbjct: 242 LFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEV-----ERAKKILDFMKK 296
Query: 67 SGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+G +P+V Y+ L++ +C G +++A + + + GL D Y+ +++ F
Sbjct: 297 NGCNPNVYNYSALMNGFCKVG---KIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 39/153 (25%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+A++ G C + +EA+ F+E+K+ GL D Y++L + FC G +++A K+L
Sbjct: 307 SALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNG-----ETDEAMKLL 361
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCS-------------WGWEEGV---------------- 92
EM S + YN ++ S WG EGV
Sbjct: 362 GEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWG-SEGVHLNKGSYRIILNALCC 420
Query: 93 ----EKAVEILRSMPERGLSPDAESYSNVISKF 121
EKAV+ L M ERG+ P +++ ++ +
Sbjct: 421 NGELEKAVKFLSVMSERGIWPHHATWNELVVRL 453
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +++GL E R EEA + ++ +G+ ++ +Y + + C G EKA K L
Sbjct: 377 NVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGEL-----EKAVKFL 431
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEE-GVEKAVEILRSMPERGLSPDAESYSNVI 118
S M + G P +N+L+ C G+ E GV + LR GL P +S+ V+
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRI----GLIPGPKSWGAVV 485
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWG-FYASYWSEKAD-- 58
+IQGL + A+ +F+EM G+ PD TY+ L C G + + K +
Sbjct: 20 TTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDG 79
Query: 59 -KVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
+ + G P+VV Y +I +C G++ E+A + R M E G PD+ +Y+ +
Sbjct: 80 WDLFCSLSLKGVKPNVVTYTTMISGFCKKGFK---EEAYTLFRKMKEDGPLPDSGTYNTL 136
Query: 118 I 118
I
Sbjct: 137 I 137
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 20 VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKL 79
+F EM ++GL + TY++L G + + + A ++ EM+ G P ++ YN L
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQ-----GLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNIL 57
Query: 80 IHSYCSWGWEE------GVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ C G E VE ++ S+ +G+ P+ +Y+ +IS F
Sbjct: 58 LDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGF 105
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
AV++ C + E+A+ +F +M+ G+AP+ +Y L G Y + A S
Sbjct: 171 AVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQ-----GLYNCNMLDDAVAFCS 225
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
EM++SG SP+V + +L+ + C +GVE+A + ++ ++G + + ++ + K
Sbjct: 226 EMLESGHSPNVPTFVELVDALCRV---KGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 280
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A++ GLC + +EA +F M+ KG P+ Y+++ FC ++ E A ++
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC-----KAHKIEDAKRIFR 190
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
+M ++G +P+ Y L+ + ++ AV M E G SP+ ++ ++
Sbjct: 191 KMQNNGIAPNAFSYGVLVQGLYNCNM---LDDAVAFCSEMLESGHSPNVPTFVELVDALC 247
Query: 123 QI 124
++
Sbjct: 248 RV 249
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
AV++ C + E+A+ +F +M+ G+AP+ +Y L G Y + A S
Sbjct: 171 AVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQ-----GLYNCNMLDDAVAFCS 225
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
EM++SG SP+V + +L+ + C +GVE+A + ++ ++G + + ++ + K
Sbjct: 226 EMLESGHSPNVPTFVELVDALCRV---KGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 280
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A++ GLC + +EA +F M+ KG P+ Y+++ FC ++ E A ++
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC-----KAHKIEDAKRIFR 190
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
+M ++G +P+ Y L+ + ++ AV M E G SP+ ++ ++
Sbjct: 191 KMQNNGIAPNAFSYGVLVQGLYNCNM---LDDAVAFCSEMLESGHSPNVPTFVELVDALC 247
Query: 123 QI 124
++
Sbjct: 248 RV 249
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
MN ++ LC E+R E+A V ++K + P+ T++ H +C + E+A
Sbjct: 193 MNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWC-----KANRVEEALWT 246
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
+ EM GF P V+ Y +I YC + K E+L M G P++ +Y+ ++S
Sbjct: 247 IQEMKGHGFRPCVISYTTIIRCYCQ---QFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 121 FG 122
Sbjct: 304 LN 305
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
++ L ++ EEA V MKR G PD Y+ L H G E+A++V
Sbjct: 298 TTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL-----EEAERVF 352
Query: 62 S-EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGL-SPDAESYSNVI 118
EM + G S + YN +I YC E +KA+E+L+ M L +PD +Y ++
Sbjct: 353 RVEMPELGVSINTSTYNSMIAMYCHHDEE---DKAIELLKEMESSNLCNPDVHTYQPLL 408
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 32/150 (21%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFC----------------- 44
N I G C R EEA +EMK G P +Y+++ +C
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 45 -----DWGFYASYWS--------EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
+ Y + S E+A +V + M SG P + YN LIH+ G E
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVISKF 121
E+ + MPE G+S + +Y+++I+ +
Sbjct: 348 AERVFRV--EMPELGVSINTSTYNSMIAMY 375
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
MN ++ LC E+R E+A V ++K + P+ T++ H +C + E+A
Sbjct: 193 MNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWC-----KANRVEEALWT 246
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
+ EM GF P V+ Y +I YC + K E+L M G P++ +Y+ ++S
Sbjct: 247 IQEMKGHGFRPCVISYTTIIRCYCQ---QFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 121 FG 122
Sbjct: 304 LN 305
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
++ L ++ EEA V MKR G PD Y+ L H G E+A++V
Sbjct: 298 TTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL-----EEAERVF 352
Query: 62 S-EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGL-SPDAESYSNVI 118
EM + G S + YN +I YC E +KA+E+L+ M L +PD +Y ++
Sbjct: 353 RVEMPELGVSINTSTYNSMIAMYCHHDEE---DKAIELLKEMESSNLCNPDVHTYQPLL 408
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 32/150 (21%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFC----------------- 44
N I G C R EEA +EMK G P +Y+++ +C
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 45 -----DWGFYASYWS--------EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
+ Y + S E+A +V + M SG P + YN LIH+ G E
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVISKF 121
E+ + MPE G+S + +Y+++I+ +
Sbjct: 348 AERVFRV--EMPELGVSINTSTYNSMIAMY 375
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 33/150 (22%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLF-HLFCD--WGFYASYWSE--- 55
N +I LC + + A V + MK+ G+ PD TY+SL LF WG A S+
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR 247
Query: 56 ------------------------KADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
+A K +EMI +P++V YN LI+ C G +
Sbjct: 248 MGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDE 307
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVISKF 121
+K + +L S +G P+A +Y+ +I+ +
Sbjct: 308 AKKVLNVLVS---KGFFPNAVTYNTLINGY 334
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWG-FYASYWSEKADKVLS 62
+I C R A + +M + G P T+ SL + FC FY +A ++
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY------EAMSLVD 173
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+++ G+ P+VV YN +I S C G V A+++L+ M + G+ PD +Y+++I++
Sbjct: 174 QIVGLGYEPNVVIYNTIIDSLCEKG---QVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 14/117 (11%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKAD--- 58
N++I GLC+ +EA+ V + KG P+ TY++L + +C +++ D
Sbjct: 293 NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK--------AKRVDDGM 344
Query: 59 KVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
K+L M G YN L YC G EK +L M G+ PD +++
Sbjct: 345 KILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK---VLGRMVSCGVHPDMYTFN 398
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+++ G C R EA ++ +++ G P+ Y+++ C+ G + A VL
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNT-----ALDVLK 208
Query: 63 EMIDSGFSPSVVEYNKLI----HSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M G P VV YN LI HS +WG + IL M G+SPD ++S +I
Sbjct: 209 HMKKMGIRPDVVTYNSLITRLFHS-GTWG------VSARILSDMMRMGISPDVITFSALI 261
Query: 119 SKFGQ 123
+G+
Sbjct: 262 DVYGK 266
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+++ L E + + EM +G++P++KT ++ FC GF ++A ++
Sbjct: 361 NSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFV-----DEALELY 415
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
+ GF+P+ + YN LIH+ C+ E VE+A ++L+ +RG +++S +
Sbjct: 416 RSRSEIGFAPTAMSYNYLIHTLCA---NESVEQAYDVLKGAIDRGHFLGGKTFSTL 468
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWS-----EK 56
NA+++ LC A++VF +KG P + C + S WS E+
Sbjct: 225 NALLRCLCERSHVSAAKSVFN--AKKGNIPFDS---------CSYNIMISGWSKLGEVEE 273
Query: 57 ADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSN 116
+KVL EM++SGF P + Y+ LI G + +VEI ++ +G PDA Y+
Sbjct: 274 MEKVLKEMVESGFGPDCLSYSHLIE---GLGRTGRINDSVEIFDNIKHKGNVPDANVYNA 330
Query: 117 VISKF 121
+I F
Sbjct: 331 MICNF 335
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
EEAEAVF EM++K PDE Y L L WG + EKA + M+ +G P+V
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDL---WGKAGNV--EKAWQWYQAMLHAGLRPNVP 610
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
N L+ ++ + +A E+L++M GL P ++Y+ ++S
Sbjct: 611 TCNSLLSTFLR---VNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 17 AEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEY 76
A +++ M+ GL+PD TYS + + G + A K+ EM+D G +P++V Y
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA-----AHKLFCEMVDQGCTPNLVTY 507
Query: 77 NKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
N ++ + + A+++ R M G PD +YS V+ G
Sbjct: 508 NIMMDLHAK---ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 20 VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKL 79
+ +EM R G P+ TY+ L H + A+Y +E A V ++M ++G P V Y L
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGR----ANYLNE-AMNVFNQMQEAGCKPDRVTYCTL 440
Query: 80 IHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
I + G+ ++ A+++ + M GLSPD +YS +I+ G+
Sbjct: 441 IDIHAKAGF---LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 58 DKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
+K+L EM+ G P+ V YN+LIHSY G + +A+ + M E G PD +Y +
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSY---GRANYLNEAMNVFNQMQEAGCKPDRVTYCTL 440
Query: 118 I 118
I
Sbjct: 441 I 441
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 12 RRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSP 71
R + A ++ +M+ G PD+ TYS + + G+ E+A+ V +EM + P
Sbjct: 518 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL-----EEAEAVFTEMQQKNWIP 572
Query: 72 SVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
Y L+ WG VEKA + ++M GL P+ + ++++S F
Sbjct: 573 DEPVYGLLVDL---WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
EEAEAVF EM++K PDE Y L L WG + EKA + M+ +G P+V
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDL---WGKAGNV--EKAWQWYQAMLHAGLRPNVP 610
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
N L+ ++ + +A E+L++M GL P ++Y+ ++S
Sbjct: 611 TCNSLLSTFLR---VNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 17 AEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEY 76
A +++ M+ GL+PD TYS + + G + A K+ EM+D G +P++V Y
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA-----AHKLFCEMVDQGCTPNLVTY 507
Query: 77 NKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
N ++ + + A+++ R M G PD +YS V+ G
Sbjct: 508 NIMMDLHAK---ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 20 VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKL 79
+ +EM R G P+ TY+ L H + A+Y +E A V ++M ++G P V Y L
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGR----ANYLNE-AMNVFNQMQEAGCKPDRVTYCTL 440
Query: 80 IHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
I + G+ ++ A+++ + M GLSPD +YS +I+ G+
Sbjct: 441 IDIHAKAGF---LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 58 DKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
+K+L EM+ G P+ V YN+LIHSY G + +A+ + M E G PD +Y +
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSY---GRANYLNEAMNVFNQMQEAGCKPDRVTYCTL 440
Query: 118 I 118
I
Sbjct: 441 I 441
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 12 RRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSP 71
R + A ++ +M+ G PD+ TYS + + G+ E+A+ V +EM + P
Sbjct: 518 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL-----EEAEAVFTEMQQKNWIP 572
Query: 72 SVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
Y L+ WG VEKA + ++M GL P+ + ++++S F
Sbjct: 573 DEPVYGLLVDL---WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
EEAEAVF EM++K PDE Y L L WG + EKA + M+ +G P+V
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDL---WGKAGNV--EKAWQWYQAMLHAGLRPNVP 610
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
N L+ ++ + +A E+L++M GL P ++Y+ ++S
Sbjct: 611 TCNSLLSTFLR---VNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 17 AEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEY 76
A +++ M+ GL+PD TYS + + G + A K+ EM+D G +P++V Y
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA-----AHKLFCEMVDQGCTPNLVTY 507
Query: 77 NKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
N ++ + + A+++ R M G PD +YS V+ G
Sbjct: 508 NIMMDLHAK---ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 20 VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKL 79
+ +EM R G P+ TY+ L H + A+Y +E A V ++M ++G P V Y L
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGR----ANYLNE-AMNVFNQMQEAGCKPDRVTYCTL 440
Query: 80 IHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
I + G+ ++ A+++ + M GLSPD +YS +I+ G+
Sbjct: 441 IDIHAKAGF---LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 58 DKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNV 117
+K+L EM+ G P+ V YN+LIHSY G + +A+ + M E G PD +Y +
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSY---GRANYLNEAMNVFNQMQEAGCKPDRVTYCTL 440
Query: 118 I 118
I
Sbjct: 441 I 441
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 12 RRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSP 71
R + A ++ +M+ G PD+ TYS + + G+ E+A+ V +EM + P
Sbjct: 518 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL-----EEAEAVFTEMQQKNWIP 572
Query: 72 SVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
Y L+ WG VEKA + ++M GL P+ + ++++S F
Sbjct: 573 DEPVYGLLVDL---WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
Query: 13 RKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPS 72
R + A +F+EMK + P EK Y++L ++ G EKA + EM +G SP+
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG-----KVEKALDLFEEMKRAGCSPT 302
Query: 73 VVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDA---ESYSNVISKFGQIWEL 127
V Y +LI G V++A + M GL+PD + N++ K G++ EL
Sbjct: 303 VYTYTELIKGLGKAGR---VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKG-LAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+A++ LC E R EA+ + EM KG PD TY+++ + FC G +KA K+
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEV-----DKAKKL 476
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
L M G P+ V Y L++ C G + +E A E++ E SP++ +YS ++
Sbjct: 477 LQVMHTHGHKPNTVSYTALLNGMCRTG--KSLE-AREMMNMSEEHWWSPNSITYSVIM 531
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I L +EA ++ + KG D+ YS++ H C G + +A ++
Sbjct: 387 NTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS-----EAKDLI 441
Query: 62 SEMIDSGF-SPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+EM+ G P VV Y +++ +C G V+KA ++L+ M G P+ SY+ +++
Sbjct: 442 NEMLSKGHCPPDVVTYTAVVNGFCRLG---EVDKAKKLLQVMHTHGHKPNTVSYTALLN 497
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+G C R EEA + E+M KG PD+ +Y ++ C E D +
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCK----EKRIVEVRDLMK 371
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ G P V YN LIH + ++A+ L+ E+G D YS ++
Sbjct: 372 KMAKEHGLVPDQVTYNTLIHMLTK---HDHADEALWFLKDAQEKGFRIDKLGYSAIV 425
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N ++Q LC + R EA EE KG A + ++++ H FC + + A V
Sbjct: 562 INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ-----NDELDAALSV 616
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
L +M V Y L+ + G + + +A E+++ M +G+ P +Y VI +
Sbjct: 617 LDDMYLINKHADVFTYTTLVDTL---GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHR 673
Query: 121 FGQI 124
+ Q+
Sbjct: 674 YCQM 677
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+ C + ++ EM+RKG+ P+ ++ + GFYA S++ KVL
Sbjct: 191 NRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMIS-----GFYAEDKSDEVGKVL 245
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ M D G + V YN I S C + ++A +L M G+ P+ +YS++I F
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCK---RKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N IQ LC ++ +EA+A+ + M G+ P+ TYS L H FC+ + E+A K+
Sbjct: 261 NIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDF-----EEAKKLF 315
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWG 87
M++ G P Y LI+ C G
Sbjct: 316 KIMVNRGCKPDSECYFTLIYYLCKGG 341
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GLC + EA A +EM G PD KTYS L C K D L
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR--------DRKIDLAL 554
Query: 62 ---SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ + SG V+ +N LIH CS G ++ A+ ++ +M R + + +Y+ ++
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIHGLCSVG---KLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 119 SKFGQIWE 126
F ++ +
Sbjct: 612 EGFFKVGD 619
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ ++ + E++F + G+AP+ +TY+ L + C + EKA L
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEF-----EKARGFL 172
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M GF P V Y+ +I+ G ++ A+E+ M ERG++PD Y+ +I F
Sbjct: 173 DWMWKEGFKPDVFSYSTVINDLAKAG---KLDDALELFDEMSERGVAPDVTCYNILIDGF 229
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GL R ++ ++E MK+ D TYSSL H CD G +KA+ V
Sbjct: 259 NIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNV-----DKAESVF 313
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+E+ + S VV YN ++ +C G +++++E+ R M + S + SY+ +I
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCG---KIKESLELWRIMEHKN-SVNIVSYNILI 366
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I LC ++R EEA + +EM + G+ + ++L G +A L
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALI-----GGLIRDSRLGEASFFLR 488
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
EM +G P+VV YN LI C G +A ++ M E G PD ++YS
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAG---KFGEASAFVKEMLENGWKPDLKTYS 538
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I C +R E+A + ++M+ + PD TY+++ G +KA +VL
Sbjct: 250 NSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVI-----GGLGLIGQPDKAREVL 304
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS------ 115
EM + G P V YN I ++C +K V+ M ++GLSP+A +Y+
Sbjct: 305 KEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVD---EMVKKGLSPNATTYNLFFRVL 361
Query: 116 NVISKFGQIWEL 127
++ + G+ WEL
Sbjct: 362 SLANDLGRSWEL 373
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWS--EKADK 59
NA+++ LC E+ +A V+ +K + PD +T++ L S W E+A+
Sbjct: 184 NALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILL----------SGWKSSEEAEA 232
Query: 60 VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
EM G P VV YN LI YC + +EKA +++ M E +PD +Y+ VI
Sbjct: 233 FFEEMKGKGLKPDVVTYNSLIDVYCK---DREIEKAYKLIDKMREEEETPDVITYTTVIG 289
Query: 120 KFGQIWE 126
G I +
Sbjct: 290 GLGLIGQ 296
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 21 FEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKLI 80
FEEMK KGL PD TY+SL ++C EKA K++ +M + +P V+ Y +I
Sbjct: 234 FEEMKGKGLKPDVVTYNSLIDVYC-----KDREIEKAYKLIDKMREEEETPDVITYTTVI 288
Query: 81 HSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
G +KA E+L+ M E G PD +Y+ I F
Sbjct: 289 GGLGLIGQP---DKAREVLKEMKEYGCYPDVAAYNAAIRNF 326
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGL--APDEKTYSSLFHLFCDWGFYAS-------- 51
N +I LC ++A + ++M+ G PD TY+ L +C +G
Sbjct: 204 NTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRR 263
Query: 52 YWSEKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDA 111
W +A+++ EM+ GF P VV YN LI C + +A+E+ M +G P+
Sbjct: 264 MW--EANRMFREMLFRGFVPDVVTYNCLIDGCCK---TNRIGRALELFEDMKTKGCVPNQ 318
Query: 112 ESYSNVISKF 121
+Y++ I +
Sbjct: 319 VTYNSFIRYY 328
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA + L R EA+ +F +K GL PD TY+ + + G ++A K+L
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI-----DEAIKLL 526
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
SEM+++G P V+ N LI++ + V++A ++ M E L P +Y+ +++
Sbjct: 527 SEMMENGCEPDVIVVNSLINTLYK---ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 122 GQ 123
G+
Sbjct: 584 GK 585
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 15/125 (12%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G + A A+F+ M ++G+ PD KTYS L C G + D+ L
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG--------RVDEGL 981
Query: 62 ---SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMP-ERGLSPDAESYSNV 117
E+ +SG +P VV YN +I+ G +E+A+ + M RG++PD +Y+++
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGL---GKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 118 ISKFG 122
I G
Sbjct: 1039 ILNLG 1043
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I LC R+ + A+ VFE+MK PD TY +L F D + + + SE
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD-----NRDLDSVKQFWSE 353
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M G P VV + L+ + C G +A + L M ++G+ P+ +Y+ +I
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAG---NFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I GL R EA+ +FE M G P+ Y+ L + GF + ++ A +
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN-----GFGKAGEADAACALFKR 951
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
M+ G P + Y+ L+ C G V++ + + + E GL+PD Y+ +I+ G+
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVG---RVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
VI+G+C+ + +EA +EM KG PD TY+ + C+ + +++A K+
Sbjct: 382 VIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCE-----NRKTDEALKLYGR 436
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M++S +PSV YN LI + +G A M +R D E+Y +I+
Sbjct: 437 MVESRCAPSVQTYNMLISMFFEMDDPDG---AFNTWTEMDKRDCVQDVETYCAMIN 489
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 17/115 (14%)
Query: 13 RKEEAEAVFEEMKR---KGLAPDEKTYSSLFHLFCDWGFYASYWSEKAD---KVLSEMID 66
+ ++AE FE + R G PD TY + C +EK D K L EM +
Sbjct: 353 KNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMC--------MAEKVDEAYKFLDEMSN 404
Query: 67 SGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
G+ P +V YN + C ++A+++ M E +P ++Y+ +IS F
Sbjct: 405 KGYPPDIVTYNCFLRVLCE---NRKTDEALKLYGRMVESRCAPSVQTYNMLISMF 456
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 15 EEAEAVFEEM---KRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSP 71
+EAE VFE + K+ L PD+K Y + +++ G Y EKA KV S M+ G
Sbjct: 233 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY-----EKARKVFSSMVGKGVPQ 287
Query: 72 SVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
S V YN L+ +E ++ +I M + PD SY+ +I +G+
Sbjct: 288 STVTYNSLMS------FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGR 333
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
+E ++++M+R + PD +Y+ L + + E+A V EM+D+G P+
Sbjct: 303 KEVSKIYDQMQRSDIQPDVVSYALLIK-----AYGRARREEEALSVFEEMLDAGVRPTHK 357
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
YN L+ ++ G VE+A + +SM + PD SY+ ++S +
Sbjct: 358 AYNILLDAFAISGM---VEQAKTVFKSMRRDRIFPDLWSYTTMLSAY 401
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I+ RR+EEA +VFEEM G+ P K Y+ L F G E+A V
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMV-----EQAKTVFKS 381
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
M P + Y ++ +Y + EG EK + + G P+ +Y +I + +
Sbjct: 382 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEK---FFKRIKVDGFEPNIVTYGTLIKGYAK 438
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ + E+A+ VF+ M+R + PD +Y+++ + + + E A+K
Sbjct: 360 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVN-----ASDMEGAEKFF 414
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ GF P++V Y LI Y VEK +E+ M G+ + + ++
Sbjct: 415 KRIKVDGFEPNIVTYGTLIKGYAK---ANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS 471
Query: 122 GQ 123
G+
Sbjct: 472 GR 473
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 33/150 (22%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWS------- 54
N V++ + ++ + A +F+EM+++ LAPD TYS+L F G + S S
Sbjct: 159 NVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQ 218
Query: 55 -----------------------EKADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG 91
KA + S + SG +P +V YN +I+ Y G +
Sbjct: 219 DRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY---GKAKL 275
Query: 92 VEKAVEILRSMPERGLSPDAESYSNVISKF 121
+A +++ M E G+ P+ SYS ++S +
Sbjct: 276 FREARLLIKEMNEAGVLPNTVSYSTLLSVY 305
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 15 EEAEAVFEEM---KRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSP 71
+EAE VFE + K+ L PD+K Y + +++ G Y EKA KV S M+ G
Sbjct: 226 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY-----EKARKVFSSMVGKGVPQ 280
Query: 72 SVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
S V YN L+ +E ++ +I M + PD SY+ +I +G+
Sbjct: 281 STVTYNSLMS------FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGR 326
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 8 LCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDS 67
+ E +E ++++M+R + PD +Y+ L + + E+A V EM+D+
Sbjct: 289 MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYG-----RARREEEALSVFEEMLDA 343
Query: 68 GFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
G P+ YN L+ ++ G VE+A + +SM + PD SY+ ++S +
Sbjct: 344 GVRPTHKAYNILLDAFAISGM---VEQAKTVFKSMRRDRIFPDLWSYTTMLSAY 394
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I+ RR+EEA +VFEEM G+ P K Y+ L F G E+A V
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMV-----EQAKTVFKS 374
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
M P + Y ++ +Y + EG EK + + G P+ +Y +I + +
Sbjct: 375 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEK---FFKRIKVDGFEPNIVTYGTLIKGYAK 431
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ + E+A+ VF+ M+R + PD +Y+++ + + + E A+K
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVN-----ASDMEGAEKFF 407
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ GF P++V Y LI Y VEK +E+ M G+ + + ++
Sbjct: 408 KRIKVDGFEPNIVTYGTLIKGYAK---ANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS 464
Query: 122 GQ 123
G+
Sbjct: 465 GR 466
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+IQG C + + A + ++M KG PD L CD G + ++ K L E
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGL----CDQGMF-----DEGKKYLEE 281
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
MI GFSP N L+ +CS+G VE+A +++ + + G + ++++ VI
Sbjct: 282 MISKGFSPHFSVSNCLVKGFCSFG---KVEEACDVVEVVMKNGETLHSDTWEMVI 333
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
++ GL R +EA ++F + +G P TY++L + S S ++S+
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLS-----LISK 379
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
+ +G P + +N +I++ G +++A++I M E G P A +++ +I +G+
Sbjct: 380 VEKNGLKPDTILFNAIINASSESG---NLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 124 IWEL 127
I +L
Sbjct: 437 IGKL 440
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
+ E ++ +M G+ PD +S L G+ + EKA+++L++M G P+VV
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAK-----GYARAGEPEKAEQILNQMRKFGVRPNVV 672
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPE-RGLSPDAESYSNVISKFGQ 123
Y ++I +CS G ++KA+++ + M GLSP+ +Y +I FG+
Sbjct: 673 IYTQIISGWCSAGE---MKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGE 719
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++Q C +R+ EEA + +M+ G+ PD T+++L + G + D ++
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCT----AEDMII 519
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEG-VEKAVEILRSMPERGLSPDAESYSNVISK 120
M+ + P+V +++ YC EEG +E+A+ M E G+ P+ ++++I
Sbjct: 520 PRMLHNKVKPNVRTCGTIVNGYC----EEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 121 FGQIWEL 127
F I ++
Sbjct: 576 FLNINDM 582
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++ G C E + EEA F MK G+ P+ ++SL GF + +V+
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK-----GFLNINDMDGVGEVVD 590
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
M + G P VV ++ L++++ S G +++ EI M E G+ PD ++S + +
Sbjct: 591 LMEEFGVKPDVVTFSTLMNAWSSVG---DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYA 647
Query: 123 QIWE 126
+ E
Sbjct: 648 RAGE 651
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+++ C EE +V + + GL + TY++L H C YW E +++L
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCS----HEYWDE-VEEIL 337
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI--- 118
+ M + + P+V+ YN LI+ C + +A++ M E+ PD +Y+ V+
Sbjct: 338 NIMYQTSYCPTVITYNILINGLCK---ARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAM 394
Query: 119 SKFGQI 124
SK G +
Sbjct: 395 SKEGMV 400
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I LC + A + E+M G PD TY+++ D+G +E+A +
Sbjct: 178 NMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN-----AEQAIRFW 232
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+ + +G P ++ Y L+ C + G +A+E+L M G PD +Y+++++
Sbjct: 233 KDQLQNGCPPFMITYTVLVELVCRYC---GSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 20 VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKL 79
V E+M +G PD TY+SL + C G E+ V+ ++ G + V YN L
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNL-----EEVASVIQHILSHGLELNTVTYNTL 320
Query: 80 IHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+HS CS + + VE EIL M + P +Y+ +I+
Sbjct: 321 LHSLCSHEYWDEVE---EILNIMYQTSYCPTVITYNILIN 357
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+VI GL + ++A ++ +M G+ PD+ T SL + FC E+A +VL
Sbjct: 423 NSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLV-----EEAGQVL 477
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
E + G Y +I C ++ +E A+E++ M G PD Y+ ++
Sbjct: 478 KETSNRGNGIRGSTYRLVIQGLCK---KKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+++++ LC++ + + A + ++M G+ P T++ L + C G+ EKAD ++
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYI-----EKADGLV 179
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPD 110
EM + G SP+ V YN LI CS V+KA+ + +M + G+ P+
Sbjct: 180 REMREMGPSPNCVSYNTLIKGLCS---VNNVDKALYLFNTMNKYGIRPN 225
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I GLC + R A + EMK KG P+ K+Y+SL + F G + A K L E
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEI-----DDAVKCLWE 384
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
MI++G + Y L+ C G + + +E+LR E+ L D +SY +++
Sbjct: 385 MIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLR---EKQLV-DRDSYDKLVN 436
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G + EEA +M+R G A +++ L +C G + W V
Sbjct: 277 NILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG-----VT 331
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM+++G P+ YN I + C +G ++ A E+L SM +PD SY+ ++ +
Sbjct: 332 DEMLNAGIYPTTSTYNIYICALCDFG---RIDDARELLSSMA----APDVVSYNTLMHGY 384
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
VI+G + + A +++EM RK L P TY L +G + E+A + +E
Sbjct: 556 VIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI-----YGHAKAGRLEQAFQYSTE 610
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
M G P+V+ +N L++ C G +++A L M E G+ P+ SY+ +ISK
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAG---NIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
E+ A+FEE+K + PD ++YS L H GF + + ++ M + G
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF-----ANETYELFYSMKEQGCVLDTR 588
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQI 124
YN +I +C G V KA ++L M +G P +Y +VI +I
Sbjct: 589 AYNIVIDGFCKCG---KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N ++ LC ++ +EA A+FEEM K PDE T+ SL G + A KV
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID-----GLGKVGRVDDAYKV 469
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAE---SYSNV 117
+M+DS + + Y LI ++ + G +E K I + M + SPD + +Y +
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK---IYKDMINQNCSPDLQLLNTYMDC 526
Query: 118 ISKFGQ 123
+ K G+
Sbjct: 527 MFKAGE 532
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
EEAE VF EM+RK PDE Y L L WG + +KA + M+ +G P+V
Sbjct: 551 EEAEGVFAEMQRKNWVPDEPVYGLLVDL---WGKAGNV--DKAWQWYQAMLQAGLRPNVP 605
Query: 75 EYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
N L+ ++ + +A +L+SM GL P ++Y+ ++S
Sbjct: 606 TCNSLLSTFLR---VHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 52.8 bits (125), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
E + +EM R G P+ TY+ L H + A+Y E A V ++M ++G P V
Sbjct: 377 EINKLLDEMVRDGCKPNTVTYNRLIHSYGR----ANYLKE-AMNVFNQMQEAGCEPDRVT 431
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
Y LI + G+ ++ A+++ + M E GLSPD +YS +I+ G+
Sbjct: 432 YCTLIDIHAKAGF---LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGK 476
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 17 AEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEY 76
A +++ M+ GL+PD TYS + + G + A ++ EM+ G +P++V +
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPA-----AHRLFCEMVGQGCTPNLVTF 502
Query: 77 NKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
N +I + E A+++ R M G PD +YS V+ G
Sbjct: 503 NIMIALHAK---ARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGH 546
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 12 RRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSP 71
R E A ++ +M+ G PD+ TYS + + GF E+A+ V +EM + P
Sbjct: 513 RNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFL-----EEAEGVFAEMQRKNWVP 567
Query: 72 SVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
Y L+ WG V+KA + ++M + GL P+ + ++++S F
Sbjct: 568 DEPVYGLLVD---LWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTF 614
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NAVI E+A +MK GL P TY++L G+ + E++ ++L
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIK-----GYGIAGKPERSSELL 173
Query: 62 SEMIDSG---FSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M++ G P++ +N L+ ++C ++ VE+A E+++ M E G+ PD +Y+ +
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCK---KKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 119 SKFGQIWE 126
+ + Q E
Sbjct: 231 TCYVQKGE 238
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 5 IQGLCVER-RKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+ + +ER R EA+ VF+ + G P +Y++L Y S S ++SE
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS-----IVSE 105
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
+ SG + +N +I+++ G +E AV+ L M E GL+P +Y+ +I +G
Sbjct: 106 VEQSGTKLDSIFFNAVINAFSESG---NMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N ++ C + + A ++F EM KGL P+ TYS L GF+ + + A V+
Sbjct: 488 NNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID-----GFFKNKDEQNAWDVI 542
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSM-PERGLSPDAESYSNVISK 120
++M S F + V YN +I+ C G KA E+L+++ E+ S SY+++I
Sbjct: 543 NQMNASNFEANEVIYNTIINGLCKVG---QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDG 599
Query: 121 FGQI 124
F ++
Sbjct: 600 FVKV 603
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 5 IQGLCVERRKEEAEAVFEEMKRK-GLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+Q C A + EM+ K G+ ++TY+S+ F G E+A +V+ E
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNM-----EEAVRVMDE 335
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFGQ 123
M+ G SV+ L++ YC G E G KA+++ M E GL+PD +S ++ F +
Sbjct: 336 MVGFGIPMSVIAATSLVNGYCK-GNELG--KALDLFNRMEEEGLAPDKVMFSVMVEWFCK 392
Query: 124 IWEL 127
E+
Sbjct: 393 NMEM 396
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NAVI E+A +MK GL P TY++L G+ + E++ ++L
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIK-----GYGIAGKPERSSELL 173
Query: 62 SEMIDSG---FSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
M++ G P++ +N L+ ++C ++ VE+A E+++ M E G+ PD +Y+ +
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCK---KKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 119 SKFGQIWE 126
+ + Q E
Sbjct: 231 TCYVQKGE 238
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 5 IQGLCVER-RKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+ + +ER R EA+ VF+ + G P +Y++L Y S S ++SE
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS-----IVSE 105
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
+ SG + +N +I+++ G +E AV+ L M E GL+P +Y+ +I +G
Sbjct: 106 VEQSGTKLDSIFFNAVINAFSESG---NMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
V+ G C E R + MK + + ++SL + GF + D+VL+
Sbjct: 266 VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN-----GFVEVMDRDGIDEVLTL 320
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
M + V+ Y+ +++++ S G+ +EKA ++ + M + G+ PDA +YS
Sbjct: 321 MKECNVKADVITYSTVMNAWSSAGY---MEKAAQVFKEMVKAGVKPDAHAYS 369
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 10/124 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEM--KRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADK 59
N +I L + +A +F M KR PD T++S+ HL+ G E
Sbjct: 155 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI-----ENCRA 209
Query: 60 VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
V M+ G P++V YN L+ +Y G A+ +L + + G+ PD SY+ +++
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMS---GTALSVLGDIKQNGIIPDVVSYTCLLN 266
Query: 120 KFGQ 123
+G+
Sbjct: 267 SYGR 270
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA++ V A +V ++K+ G+ PD +Y+ L + + S KA +V
Sbjct: 227 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN-----SYGRSRQPGKAKEVF 281
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M P+VV YN LI +Y S G+ + +AVEI R M + G+ P+ S +++
Sbjct: 282 LMMRKERRKPNVVTYNALIDAYGSNGF---LAEAVEIFRQMEQDGIKPNVVSVCTLLA 336
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
++A +F EM++ PD +TY +L + G + W A ++ +M+ + +PS
Sbjct: 28 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW--RW---AMNLMDDMLRAAIAPSRS 82
Query: 75 EYNKLIHSYCSWG-WEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
YN LI++ S G W E A+E+ + M + G+ PD +++ V+S +
Sbjct: 83 TYNNLINACGSSGNWRE----ALEVCKKMTDNGVGPDLVTHNIVLSAY 126
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA++ L ++ + E V+++M G +PD TY+ L W Y ++ D++
Sbjct: 223 NAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILL-----WTNYRLGKMDRFDRLF 277
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
EM GFSP YN L+H G A+ L M E G+ P Y+ +I
Sbjct: 278 DEMARDGFSPDSYTYNILLH---ILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL 334
Query: 122 GQIWEL 127
+ L
Sbjct: 335 SRAGNL 340
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+I GL E + +EM + G PD Y+ + G+ S +KA ++
Sbjct: 328 TTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMI-----TGYVVSGELDKAKEMF 382
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
EM G P+V YN +I C G +A +L+ M RG +P+ YS ++S
Sbjct: 383 REMTVKGQLPNVFTYNSMIRGLCMAGE---FREACWLLKEMESRGCNPNFVVYSTLVS 437
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 10/124 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEM--KRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADK 59
N +I L + +A +F M KR PD T++S+ HL+ G E
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI-----ENCRA 341
Query: 60 VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
V M+ G P++V YN L+ +Y G A+ +L + + G+ PD SY+ +++
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMS---GTALSVLGDIKQNGIIPDVVSYTCLLN 398
Query: 120 KFGQ 123
+G+
Sbjct: 399 SYGR 402
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
NA++ V A +V ++K+ G+ PD +Y+ L + + S KA +V
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN-----SYGRSRQPGKAKEVF 413
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M P+VV YN LI +Y S G+ + +AVEI R M + G+ P+ S +++
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGF---LAEAVEIFRQMEQDGIKPNVVSVCTLLA 468
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 15 EEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVV 74
++A +F EM++ PD +TY +L + G + W A ++ +M+ + +PS
Sbjct: 160 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW--RW---AMNLMDDMLRAAIAPSRS 214
Query: 75 EYNKLIHSYCSWG-WEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
YN LI++ S G W E A+E+ + M + G+ PD +++ V+S +
Sbjct: 215 TYNNLINACGSSGNWRE----ALEVCKKMTDNGVGPDLVTHNIVLSAY 258
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGL-APDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+I C E AEA+ EM+ +G+ AP +++H D G+ +K V
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAP-----IAIYHTMMD-GYTMVADEKKGLVVFK 473
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
+ + GF+P+VV Y LI+ Y G + KA+E+ R M E G+ + ++YS +I+ F
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVG---KISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 123 QI 124
++
Sbjct: 531 KL 532
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 52.8 bits (125), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I G C + EA ++ ++M R G+ P T++ L + G + A+++
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT-----AEEIRG 336
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+MI G P VV + LI YC G V + + M RG+ P+A +YS +I+
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVG---QVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N+++ L R E+A +F+E R D KT++ L C G +EKA ++
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG-----KAEKALEL 228
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGL-SPDAESYSNVIS 119
L M G P +V YN LI +C + KA E+ + + + SPD +Y+++IS
Sbjct: 229 LGVMSGFGCEPDIVTYNTLIQGFCK---SNELNKASEMFKDVKSGSVCSPDVVTYTSMIS 285
Query: 120 KF 121
+
Sbjct: 286 GY 287
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+GLC + E+A + M G PD TY++L FC S KA ++
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCK-----SNELNKASEMF 264
Query: 62 SEMIDSG--FSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+ + SG SP VV Y +I YC G + +A +L M G+ P +++ ++
Sbjct: 265 KD-VKSGSVCSPDVVTYTSMISGYCKAG---KMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Query: 120 KFGQIWEL 127
+ + E+
Sbjct: 321 GYAKAGEM 328
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 52.8 bits (125), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++I G C + EA ++ ++M R G+ P T++ L + G + A+++
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT-----AEEIRG 336
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+MI G P VV + LI YC G V + + M RG+ P+A +YS +I+
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVG---QVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N+++ L R E+A +F+E R D KT++ L C G +EKA ++
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG-----KAEKALEL 228
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGL-SPDAESYSNVIS 119
L M G P +V YN LI +C + KA E+ + + + SPD +Y+++IS
Sbjct: 229 LGVMSGFGCEPDIVTYNTLIQGFCK---SNELNKASEMFKDVKSGSVCSPDVVTYTSMIS 285
Query: 120 KF 121
+
Sbjct: 286 GY 287
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+GLC + E+A + M G PD TY++L FC S KA ++
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCK-----SNELNKASEMF 264
Query: 62 SEMIDSG--FSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
+ + SG SP VV Y +I YC G + +A +L M G+ P +++ ++
Sbjct: 265 KD-VKSGSVCSPDVVTYTSMISGYCKAG---KMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Query: 120 KFGQIWEL 127
+ + E+
Sbjct: 321 GYAKAGEM 328
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N +I+GLC E A + +E ++ P+ T+S L FC+ G + E+A K+
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKF-----EEAFKL 259
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
L M P + +N LI G VE+ +++L M +G P+ +Y V+
Sbjct: 260 LERMEKERIEPDTITFNILISGLRKKG---RVEEGIDLLERMKVKGCEPNPGTYQEVL 314
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I GL + R EE + E MK KG P+ TY + +G + +A +++
Sbjct: 276 NILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVL-----YGLLDKKRNLEAKEMM 330
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSP 109
S+MI G PS + Y K++ C + V + +LR M G P
Sbjct: 331 SQMISWGMRPSFLSYKKMVLGLCE---TKSVVEMDWVLRQMVNHGFVP 375
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKR---KGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+++G R + + E M+R + PDE TY+++ F + G ++A +V
Sbjct: 420 LMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLM-----DRARQV 474
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPE-RGLSPDAESYSNVI 118
L+EM G + + YN L+ YC + +++A ++LR M E G+ PD SY+ +I
Sbjct: 475 LAEMARMGVPANRITYNVLLKGYCK---QLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I G + A A F EM+ +G+AP + +Y++L F S + A++V
Sbjct: 527 NIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMK-----AFAMSGQPKLANRVF 581
Query: 62 SEMI-DSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISK 120
EM+ D ++ +N L+ YC G +E A ++ M E G P+ +Y ++ +
Sbjct: 582 DEMMNDPRVKVDLIAWNMLVEGYCRLGL---IEDAQRVVSRMKENGFYPNVATYGSLANG 638
Query: 121 FGQ 123
Q
Sbjct: 639 VSQ 641
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I LC R E+ +EMK++GLAPD Y++L C + A K+ E
Sbjct: 403 MISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK-----AEMIRPAKKLWDE 457
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEG-VEKAVEILRSMPERGLSPDAESYSNVI 118
M G ++ YN LI EEG E+++ + M ERG+ PD Y ++I
Sbjct: 458 MFVEGCKMNLTTYNVLIRKLS----EEGEAEESLRLFDKMLERGIEPDETIYMSLI 509
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+++ GL ++AEA+ M+++G+ PD T++SL + G EKA V+
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK-----PEKALDVI 349
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+M + G +P+VV + I S CS A+++ M E G+ P+A + S ++
Sbjct: 350 GKMKEKGVAPNVVSWTA-IFSGCS--KNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Query: 122 G 122
G
Sbjct: 407 G 407
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+++I L + R EAE F +M G+ PDE Y + + + G ++A++++
Sbjct: 586 SSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI-----DEANELV 640
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
E++ PS Y LI + G +EK + L M E GLSP+ Y+ +I F
Sbjct: 641 EEVVKHFLRPSSFTYTVLISGFVKMGM---MEKGCQYLDKMLEDGLSPNVVLYTALIGHF 697
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
V+ LC + ++ A A+ + M+ GL P YSS+ G +A++ ++
Sbjct: 553 VVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVV-----EAEETFAK 607
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M++SG P + Y +I++Y G +++A E++ + + L P + +Y+ +IS F
Sbjct: 608 MLESGIQPDEIAYMIMINTYARNG---RIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 4 VIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSE 63
+I GL + E + +E + G PD Y+ + G+ + EKA+++ E
Sbjct: 333 LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT-----GYISGGELEKAEEMFKE 387
Query: 64 MIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M + G P+V YN +I +C G ++A +L+ M RG +P+ YS +++
Sbjct: 388 MTEKGQLPNVFTYNSMIRGFCMAG---KFKEACALLKEMESRGCNPNFVVYSTLVNNL 442
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV- 60
NA++ L ++ + + V+E+M G PD TY+ + +A++ K D++
Sbjct: 226 NAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM--------FANFRLGKTDRLY 277
Query: 61 --LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
L EM+ GFSP + YN L+H + A+ +L M E G+ P ++ +I
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLA---ALNLLNHMREVGVEPGVIHFTTLI 334
Query: 119 SKFGQIWEL 127
+ +L
Sbjct: 335 DGLSRAGKL 343
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N V+ +EA+ V + M+ +GL PD TY+ + + G ++A ++L
Sbjct: 411 NLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMM-----DEAQEIL 465
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+E S V Y+ LI YC E ++A+++L M G+ P+A+ Y+ +I F
Sbjct: 466 AEAKKKHKKLSPVTYHALIRGYCKI---EEYDEALKLLNEMDRFGVQPNADEYNKLIQSF 522
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+I G +EA+ + E K+K TY +L +C Y ++A K+L
Sbjct: 446 TVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEY-----DEALKLL 500
Query: 62 SEMIDSGFSPSVVEYNKLIHSYC--SWGWEEGVEKAVEILRSMPERGLSPDAES 113
+EM G P+ EYNKLI S+C + W EKA + M ++GL +A S
Sbjct: 501 NEMDRFGVQPNADEYNKLIQSFCLKALDW----EKAEVLFEEMKQKGLHLNAIS 550
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N + LC R E AE + + R G+ PD TY++L G+ ++A V
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIK-----GYTRFIGIDEAYAV 70
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
M ++G P V YN LI + + +++ M GLSPD SY+ ++S
Sbjct: 71 TRRMREAGIEPDVTTYNSLISGAAK---NLMLNRVLQLFDEMLHSGLSPDMWSYNTLMS 126
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 20 VFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVEYNKL 79
+++EMK++GLAP + Y+SL ++ + ++A K++ ++ + G P V YN +
Sbjct: 316 LYDEMKKRGLAPGIEVYNSLVYVLTREDCF-----DEAMKLMKKLNEEGLKPDSVTYNSM 370
Query: 80 IHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
I C G ++ A +L +M LSP +++
Sbjct: 371 IRPLCEAG---KLDVARNVLATMISENLSPTVDTF 402
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N+++ L E +EA + +++ +GL PD TY+S+ C+ G + A VL
Sbjct: 333 NSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKL-----DVARNVL 387
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ MI SP+V ++ + + EK +E+L M L P E++ ++ K
Sbjct: 388 ATMISENLSPTVDTFHAFLEAV-------NFEKTLEVLGQMKISDLGPTEETFLLILGKL 440
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
++ GLC + R E +F EMK K + D + Y L GF A A +
Sbjct: 338 TLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIE-----GFVADGKVRSACNLWE 392
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+++DSG+ + YN +I CS V+KA ++ + E L PD E+ S ++ +
Sbjct: 393 DLVDSGYIADIGIYNAVIKGLCSVNQ---VDKAYKLFQVAIEEELEPDFETLSPIMVAY 448
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
+++ GL ++A MK G P Y+SL F + EK +
Sbjct: 859 SIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYF-----FKEKQLEKVLETCQ 913
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
+M PSVV Y +I Y S G VE+A R+M ERG SPD ++YS I+
Sbjct: 914 KMEGESCEPSVVTYTAMICGYMSLG---KVEEAWNAFRNMEERGTSPDFKTYSKFINCLC 970
Query: 123 Q 123
Q
Sbjct: 971 Q 971
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
A+I G + EEA F M+ +G +PD KTYS + C + SE A K+L
Sbjct: 928 TAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQ-----ACKSEDALKLL 982
Query: 62 SEMIDSGFSPSVVEYNKLIH 81
SEM+D G +PS + + + +
Sbjct: 983 SEMLDKGIAPSTINFRTVFY 1002
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
+ +I+ LC R EA+ +F EM KGL P TY+S+ +C G ++ +
Sbjct: 618 HVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEG-----EIDRGLSCI 672
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWG 87
M + +P V+ Y LIH C+ G
Sbjct: 673 VRMYEDEKNPDVITYTSLIHGLCASG 698
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N +++ LC R + A VF+EM +G PD +Y L FC G E+A +
Sbjct: 155 LNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL-----EEATHL 209
Query: 61 LSEMI----DSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSN 116
L M G +V Y L+ + C G V+ A+EIL + +GL Y +
Sbjct: 210 LYSMFWRISQKGSGEDIVVYRILLDALCDAG---EVDDAIEILGKILRKGLKAPKRCYHH 266
Query: 117 V 117
+
Sbjct: 267 I 267
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKV 60
+N +++ LC R + A VF+EM +G PD +Y L FC G E+A +
Sbjct: 155 LNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL-----EEATHL 209
Query: 61 LSEMI----DSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSN 116
L M G +V Y L+ + C G V+ A+EIL + +GL Y +
Sbjct: 210 LYSMFWRISQKGSGEDIVVYRILLDALCDAG---EVDDAIEILGKILRKGLKAPKRCYHH 266
Query: 117 V 117
+
Sbjct: 267 I 267
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 19/123 (15%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKG------LAPDEKTYSSLFHLFCDWGFYASYWSEK 56
A+I+G ++R + A AV + +KRK + P+ Y+SL +G +
Sbjct: 151 AMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFG--------E 202
Query: 57 ADKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEG-VEKAVEILRSMPERGLSPDAESYS 115
A+K+L +M + G P++V YN L+ Y EEG KA+ IL E+G P+ +YS
Sbjct: 203 AEKILKDMEEEGIVPNIVTYNTLMVIYM----EEGEFLKALGILDLTKEKGFEPNPITYS 258
Query: 116 NVI 118
+
Sbjct: 259 TAL 261
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 1 MNAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLF---CDWGFYASYWSEKA 57
+N +I L E+A++ F+ K L P+ +++ L F CDW E A
Sbjct: 154 LNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDW--------EAA 205
Query: 58 DKVLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY 114
KV EM++ PSVV YN LI C + + KA +L M ++ + P+A ++
Sbjct: 206 CKVFDEMLEMEVQPSVVTYNSLIGFLCR---NDDMGKAKSLLEDMIKKRIRPNAVTF 259
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+ LC + ++ ++FEE+++ G PD ++++L FY + D++
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLE-----EFYRRELFVEGDRIW 251
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
M SP++ YN + + A+ ++ M G+SPD +Y+ +I+ +
Sbjct: 252 DLMKSKNLSPNIRSYNSRVR---GLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEK-ADKV 60
A+++ + +E VF M G++P+ TYS L G A + K A K
Sbjct: 236 TAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIK-----GLAADGKTHKDAKKY 290
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS- 119
L EM+ +G SP+ Y + ++ G EE A E+L+ M +G PD ++ +
Sbjct: 291 LLEMMGNGMSPNAATYTAVFEAFVREGKEES---ARELLQEMKGKGFVPDEKAVREALEY 347
Query: 120 KFGQIW 125
K GQ++
Sbjct: 348 KRGQVF 353
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGF--YASYWSEKADKV 60
+++ G V+R +EA V ++MK G+ PD ++SL C+ S +A +
Sbjct: 213 SLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNI 272
Query: 61 LSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
+ EM P+ + YN L+ G V ++ +IL M G PD SY V+
Sbjct: 273 MLEMRSYKIQPTSMSYNILLSCL---GRTRRVRESCQILEQMKRSGCDPDTGSYYFVV 327
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLS 62
A++ G +R EA V+E ++ + TY+ + +C Y KA+ +
Sbjct: 358 AIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKY-----NKAEMLFD 412
Query: 63 EMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKFG 122
EM+ GF VV Y+ ++ Y G + AV ++ M +RG P+ Y+++I G
Sbjct: 413 EMVKKGFDKCVVAYSNIMDMY---GKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHG 469
Query: 123 QIWEL 127
+ +L
Sbjct: 470 RAMDL 474
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N++I LC+ + ++A V++E+K G PD TY L C SY + A ++
Sbjct: 293 NSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCC-----KSYRMDDAMRIY 347
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVI 118
EM +GF P + YN L+ V +A ++ M + G+ +Y+ +I
Sbjct: 348 GEMQYNGFVPDTIVYNCLLDGTLK---ARKVTEACQLFEKMVQEGVRASCWTYNILI 401
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 7 GLCVER-RKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMI 65
G CV+R EE + V + M+++ + D +Y L F +G E+A++++ M
Sbjct: 254 GCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYG-----KVEEAERLVLMMH 308
Query: 66 DSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESY---SNVISKFG 122
D YN +++ Y +G VEK +E+ M RG++P+ ++Y N + K G
Sbjct: 309 DKKLRVESYLYNLIMNGYSRFGL---VEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAG 365
Query: 123 QIWE 126
++ E
Sbjct: 366 KVCE 369
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
+AE VF+EMK G Y+ + +L+ G Y +K+L EM D P +
Sbjct: 62 KAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTM-----VEKLLREMEDETVKPDIFT 116
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
N +H+Y EG+EK ++R ++GL D +Y++ + +
Sbjct: 117 VNTRLHAYSVVSDVEGMEKF--LMRCEADQGLHLDWRTYADTANGY 160
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 13 RKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPS 72
R + +VF MK KG+ D TY+SL H G + A ++ EM D+G P+
Sbjct: 137 RIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV-----DGAMRLWEEMRDNGCEPT 191
Query: 73 VVEYNKLIHSYCSWGWEEG-VEKAVEILRSMPERGLSPDAESYS 115
VV Y +Y + +G VE+A E+ + M +SP+ +Y+
Sbjct: 192 VVSYT----AYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYT 231
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 16 EAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVLSEMIDSGFSPSVVE 75
+AE VF+EMK G Y+ + +L+ G Y +K+L EM D P +
Sbjct: 157 KAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTM-----VEKLLREMEDETVKPDIFT 211
Query: 76 YNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
N +H+Y EG+EK ++R ++GL D +Y++ + +
Sbjct: 212 VNTRLHAYSVVSDVEGMEKF--LMRCEADQGLHLDWRTYADTANGY 255
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 53/124 (42%), Gaps = 12/124 (9%)
Query: 3 AVIQGLCVERRKEEAEAVFEEMKRKGLAPD---EKTYSSLFHLFCDWGFYASYWSEKADK 59
AVI+ L R E VF+ K L P E Y + C+ SE
Sbjct: 100 AVIRFLRQSSRLHEILPVFDTWK--NLEPSRISENNYERIIRFLCE----EKSMSEAIRA 153
Query: 60 VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVIS 119
S + D SPS+ YN +IHSY G E+A+ L M E GL P E+Y +I
Sbjct: 154 FRSMIDDHELSPSLEIYNSIIHSYADDG---KFEEAMFYLNHMKENGLLPITETYDGLIE 210
Query: 120 KFGQ 123
+G+
Sbjct: 211 AYGK 214
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKGLAPDEKTYSSLFHLFCDWGFYASYWSEKADKVL 61
N +I+GLC + EA A+ +E++ KGL PD T++ L H Y E+ +++
Sbjct: 181 NTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLH-----ESYTKGKFEEGEQIW 235
Query: 62 SEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYSNVISKF 121
+ M++ + YN + E E+ V + + L PD +++ +I F
Sbjct: 236 ARMVEKNVKRDIRSYNARL---LGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 2 NAVIQGLCVERRKEEAEAVFEEMKRKG--LAPDEKTYSSLFHLFCDWGFYASYWSEKADK 59
N++++ LC RR E+ + EEM+ KG +P++ T+S L S S+ D
Sbjct: 356 NSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKY--------SQRSKDVDI 407
Query: 60 VLSEMIDSGFSPSVVEYNKLIHSYCSWGWEEGVEKAVEILRSMPERGLSPDAESYS 115
VL M + + YN + Y W EE V EI M GL PD +Y+
Sbjct: 408 VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVR---EIWSEMERSGLGPDQRTYT 460