Miyakogusa Predicted Gene

Lj3g3v3312850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3312850.1 Non Chatacterized Hit- tr|I3SZB3|I3SZB3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,GUN4-like,NULL; seg,NULL; GUN4,GUN4-like,CUFF.45558.1
         (272 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59400.1 | Symbols: GUN4 | enzyme binding;tetrapyrrole bindin...   216   2e-56

>AT3G59400.1 | Symbols: GUN4 | enzyme binding;tetrapyrrole binding |
           chr3:21948881-21949678 REVERSE LENGTH=265
          Length = 265

 Score =  216 bits (549), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 108/192 (56%), Positives = 139/192 (72%), Gaps = 7/192 (3%)

Query: 81  LDLLRELLSARNFREADDETRRLLIALAGEPAIKRGYVFFSEVQFISETDLKAIDELWRE 140
            D+L   L  +NFR+AD+ETRRLLI ++GE A+KRGYVFFSEV+ IS  DL+AID LW +
Sbjct: 81  FDVLENHLVNQNFRQADEETRRLLIQISGEAAVKRGYVFFSEVKTISPEDLQAIDNLWIK 140

Query: 141 HSDNRFGYSVQKRIFEKVDKDFTNFFIKVGWMKKLDTEMEQFNYRSFPTEFIWELNDDTP 200
           HSD RFGYSVQ++I+ KV KDFT FF+KV WMK LDTE+ Q+NYR+FP EF WELND+TP
Sbjct: 141 HSDGRFGYSVQRKIWLKVKKDFTRFFVKVEWMKLLDTEVVQYNYRAFPDEFKWELNDETP 200

Query: 201 EGHLPLTNALRGTRLLGNIFTHPAFDVVEEQESGDAVGDNKGNGALTELKDNTSSSTKKP 260
            GHLPLTNALRGT+LL  + +HPAF   ++  SG+   +++ N  +   K+       K 
Sbjct: 201 LGHLPLTNALRGTQLLKCVLSHPAFATADDN-SGET--EDELNRGVAVAKEQAGVGADK- 256

Query: 261 LVQKAFKPDYSF 272
              + FK +YSF
Sbjct: 257 ---RVFKTNYSF 265