Miyakogusa Predicted Gene

Lj3g3v3312840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3312840.1 Non Chatacterized Hit- tr|J9KLT2|J9KLT2_ACYPI
Uncharacterized protein OS=Acyrthosiphon pisum PE=4
SV,39.06,7e-16,DUF2054,Uncharacterised protein family UPF0454;
seg,NULL; UNCHARACTERIZED,Uncharacterised protein fa,CUFF.45557.1
         (272 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59390.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   355   2e-98
AT3G59390.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   355   2e-98

>AT3G59390.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 22 plant structures; EXPRESSED
           DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
           Protein of unknown function DUF2054
           (InterPro:IPR019352); Has 184 Blast hits to 184 proteins
           in 72 species: Archae - 0; Bacteria - 0; Metazoa - 116;
           Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes -
           25 (source: NCBI BLink). | chr3:21946160-21948166
           FORWARD LENGTH=273
          Length = 273

 Score =  355 bits (910), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 171/250 (68%), Positives = 211/250 (84%), Gaps = 1/250 (0%)

Query: 23  ITAIRKDIGLQSIIPTCKTTVQGRYHLTDDNGFVCSALSVDSMSRCCPQSREKFSCHGCN 82
           ++AIRKDIG      +C+TTVQGRY ++DD G VC ALS++S +RCCP   E+FSCHGCN
Sbjct: 25  VSAIRKDIGFLEE-RSCRTTVQGRYLISDDEGNVCDALSLESRTRCCPWKGERFSCHGCN 83

Query: 83  VLSQCCNSYEYCVSCCLNPALTSKEQVLKMKISKPVTARTYENVFDYCAARCRHSSESVV 142
           +LSQCCNSYE+CVSCCLNP+ T  E+V+K+K++KP T+ TY++VFD+CA RCRH+SESVV
Sbjct: 84  ILSQCCNSYEFCVSCCLNPSQTLLEKVVKVKVAKPATSGTYKSVFDFCAGRCRHNSESVV 143

Query: 143 HENAYLSDFHHCFSLPSNSSGTNVTLTEARLNGINVVVGRQGESCSSVCKLRGQSCVPNK 202
           HENAY S+FHHCFSL SN+SG N+T  E RL GI+V+VG QG+SC +VCK RGQ CV NK
Sbjct: 144 HENAYHSEFHHCFSLTSNASGANLTQVETRLLGIDVIVGSQGDSCDAVCKSRGQLCVMNK 203

Query: 203 LVVLNNCDIIQRYMSCKGSCLASVGTDQPAEVVYDAPKDLNPGSCLYTETESVLSCDGSH 262
           L +LN CD+++RYM+CKGSCLAS G DQPAEVV DAP+DL PG+CLYT T+S+LSCDGSH
Sbjct: 204 LSLLNQCDVMKRYMNCKGSCLASAGADQPAEVVEDAPRDLYPGACLYTRTQSLLSCDGSH 263

Query: 263 QHTKRLCPCA 272
           QHT+RLCPCA
Sbjct: 264 QHTRRLCPCA 273


>AT3G59390.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 22 plant structures; EXPRESSED
           DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
           Protein of unknown function DUF2054
           (InterPro:IPR019352); Has 35333 Blast hits to 34131
           proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr3:21946160-21948166 FORWARD LENGTH=273
          Length = 273

 Score =  355 bits (910), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 171/250 (68%), Positives = 211/250 (84%), Gaps = 1/250 (0%)

Query: 23  ITAIRKDIGLQSIIPTCKTTVQGRYHLTDDNGFVCSALSVDSMSRCCPQSREKFSCHGCN 82
           ++AIRKDIG      +C+TTVQGRY ++DD G VC ALS++S +RCCP   E+FSCHGCN
Sbjct: 25  VSAIRKDIGFLEE-RSCRTTVQGRYLISDDEGNVCDALSLESRTRCCPWKGERFSCHGCN 83

Query: 83  VLSQCCNSYEYCVSCCLNPALTSKEQVLKMKISKPVTARTYENVFDYCAARCRHSSESVV 142
           +LSQCCNSYE+CVSCCLNP+ T  E+V+K+K++KP T+ TY++VFD+CA RCRH+SESVV
Sbjct: 84  ILSQCCNSYEFCVSCCLNPSQTLLEKVVKVKVAKPATSGTYKSVFDFCAGRCRHNSESVV 143

Query: 143 HENAYLSDFHHCFSLPSNSSGTNVTLTEARLNGINVVVGRQGESCSSVCKLRGQSCVPNK 202
           HENAY S+FHHCFSL SN+SG N+T  E RL GI+V+VG QG+SC +VCK RGQ CV NK
Sbjct: 144 HENAYHSEFHHCFSLTSNASGANLTQVETRLLGIDVIVGSQGDSCDAVCKSRGQLCVMNK 203

Query: 203 LVVLNNCDIIQRYMSCKGSCLASVGTDQPAEVVYDAPKDLNPGSCLYTETESVLSCDGSH 262
           L +LN CD+++RYM+CKGSCLAS G DQPAEVV DAP+DL PG+CLYT T+S+LSCDGSH
Sbjct: 204 LSLLNQCDVMKRYMNCKGSCLASAGADQPAEVVEDAPRDLYPGACLYTRTQSLLSCDGSH 263

Query: 263 QHTKRLCPCA 272
           QHT+RLCPCA
Sbjct: 264 QHTRRLCPCA 273