Miyakogusa Predicted Gene

Lj3g3v3312790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3312790.1 Non Chatacterized Hit- tr|G7ZXZ9|G7ZXZ9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,53.33,9e-17,coiled-coil,NULL,CUFF.45548.1
         (590 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G05950.1 | Symbols:  | unknown protein; Has 50 Blast hits to ...   312   3e-85

>AT1G05950.1 | Symbols:  | unknown protein; Has 50 Blast hits to 45
           proteins in 14 species: Archae - 5; Bacteria - 0;
           Metazoa - 4; Fungi - 0; Plants - 34; Viruses - 0; Other
           Eukaryotes - 7 (source: NCBI BLink). |
           chr1:1804573-1807471 REVERSE LENGTH=627
          Length = 627

 Score =  312 bits (800), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 215/630 (34%), Positives = 332/630 (52%), Gaps = 97/630 (15%)

Query: 3   SSDVCPTEDAVKLFLDYLVDPLLPAKSSVRDNPTLSQQDSVVKQVHSVVLLYNYYHRKLH 62
           ++D CPTEDA++  L+ LVDPLLP+K +  D P+ S ++SV KQVH+VVLLYNYYHRK +
Sbjct: 13  TTDSCPTEDAIRALLESLVDPLLPSKPT-DDLPSTSIRESVAKQVHAVVLLYNYYHRKDN 71

Query: 63  PELAYLPFDEFCKVTVVLKPPLLAYMKFMLGSNEDDLTNVEKQLSLTEKTIMGACNVCKY 122
           P L  L F+ F  +  V+KP LL ++K      ED    V  Q  L EK I+ AC++   
Sbjct: 72  PHLECLSFESFRSLATVMKPALLQHLK------EDG--GVSGQTVLLEKVIVDACSLSMS 123

Query: 123 LDASKNAPNIEGWPISKVAILLIDSKKEYCFLPFGSITMGVWSVVEKSLDTSSQVSEVAS 182
           LDAS +   +   PI +VA+LL+DS+K+ C+L   SIT GVWS++EK ++          
Sbjct: 124 LDASSDLFILNKCPIRRVAVLLVDSEKKSCYLQHSSITQGVWSLLEKPIEK--------- 174

Query: 183 GTKLTYRMKRASRNTTKDELKVNEDVLLQVGYSAVREATGIDSTDVKLLDSYTVYSQSKE 242
                   ++A+R   K+     E V  +V ++ V+EATG++  D+ +L+ + V S S+E
Sbjct: 175 --------EKAARENQKE-----EGVFQKVAFAVVKEATGVNHKDIVILERHLVCSLSEE 221

Query: 243 KAASRFYIMQC-SQSQSVGQEVNPFPLKDVIESLQGPLVKKSSGSWTITPVVDYLHVLPY 301
           K A RFYIM+C SQ +  G+     P+++V+  +QGPL +KS   WT+  +V+Y HVLPY
Sbjct: 222 KTAVRFYIMKCTSQDKFSGEN----PVEEVLSCMQGPLFEKSFSDWTMNSIVEYFHVLPY 277

Query: 302 SEIISKWISR------------EAFSNSLQISRV--TQTNIMLDIPEVNESLGNKVSFTD 347
           + +I  W SR            EA  + ++ ++V  T+ + + DI E  E    K  + +
Sbjct: 278 ATLIEDWFSRRGDTEFVIEKEPEAVCDDIESNKVDATKESEVSDIFERREKAALKRRY-E 336

Query: 348 FDSQPSIEMLKQKENNRSCTLRLSDSIKEPHELDANKPSVQYNSNCSAITVKAMQADSTS 407
             ++    +L         T RL +   +     A +P+V         TV A++A +  
Sbjct: 337 IKAKKVAALLSHPGARGKATTRLQNRYLKGSMSGAKEPNVHSE------TVVALKAKNVG 390

Query: 408 MDITESEINNLASCHKICANG-------------------------PNTSSEKDTIDGCK 442
                   N ++ C    +NG                         P+  +    ++   
Sbjct: 391 --------NEMSPCKDNYSNGEKGGFEVASDPKELKERGLQRKKAVPDRLNSIHKLNSTP 442

Query: 443 LIANHCNSDVEKLHILVDSKEI-LSQTALTALIRKRNELALQQRKIEDDIANCEKKIQRV 501
             A++ N ++E+L   + SK   LS+TAL  L+ KR++L  QQR IED+IA C+K IQ +
Sbjct: 443 ASAHNSNPNLEELQTSLLSKATSLSETALKVLLCKRDKLTRQQRNIEDEIAKCDKCIQNI 502

Query: 502 LTDGEDEFELKIESIIEGCNDVWVRN--QERTCGQQSFPLKRKRLSEAVFIALSPCQELD 559
             D    +EL++E+++E CN+ + R   QE          KR +LSE +    S CQ LD
Sbjct: 503 KGD----WELQLETVLECCNETYPRRNLQESLDKSACQSNKRLKLSETLPSTKSLCQRLD 558

Query: 560 GVCRENNWLLPTYHLFQSVGGFQANVTVKG 589
            +C  NNW+LP Y +  S GG++A V + G
Sbjct: 559 DICLMNNWVLPNYRVAPSDGGYEAEVRITG 588