Miyakogusa Predicted Gene

Lj3g3v3302770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3302770.1 Non Chatacterized Hit- tr|I1LJQ9|I1LJQ9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,93.09,0,DNA-glycosylase,DNA glycosylase; no description,DNA
glycosylase; no description,Helix-turn-helix, ba,CUFF.45545.1
         (236 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31450.2 | Symbols: ATNTH1 | DNA glycosylase superfamily prot...   355   1e-98
AT2G31450.1 | Symbols: ATNTH1 | DNA glycosylase superfamily prot...   355   1e-98
AT1G05900.2 | Symbols: ATNTH2, NTH2 | endonuclease III 2 | chr1:...   342   2e-94
AT1G05900.1 | Symbols: ATNTH2, NTH2 | endonuclease III 2 | chr1:...   248   2e-66
AT3G47830.1 | Symbols:  | DNA glycosylase superfamily protein | ...    49   4e-06

>AT2G31450.2 | Symbols: ATNTH1 | DNA glycosylase superfamily protein
           | chr2:13401318-13404134 REVERSE LENGTH=377
          Length = 377

 Score =  355 bits (911), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 162/217 (74%), Positives = 190/217 (87%)

Query: 1   MRCSAEAPVDTMGCEKAGNTLPPKERRFAVLVSSLLSSQTKDHVNHGAIQRLLQNDLLTA 60
           MR S +APVD+MGC+KAG+ LPP ERRFAVL+ +LLSSQTKD VN+ AI RL QN LLT 
Sbjct: 145 MRSSEDAPVDSMGCDKAGSFLPPTERRFAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTP 204

Query: 61  DAINNADEETIKKLIYPVGFYTRKATNLKKIANICLMKYDGDIPNSLEQLLLLPGIGPKM 120
           +A++ ADE TIK+LIYPVGFYTRKAT +KKIA ICL+KYDGDIP+SL+ LL LPGIGPKM
Sbjct: 205 EAVDKADESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDLLSLPGIGPKM 264

Query: 121 AHLVMNVGWNNVQGICVDTHVHRICNRLGWVSRLGTKQKTLTPEQTREALQRWLPREEWD 180
           AHL++++ WN+VQGICVDTHVHRICNRLGWVSR GTKQKT +PE+TR ALQ+WLP+EEW 
Sbjct: 265 AHLILHIAWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWV 324

Query: 181 PINPLLVGFGQTICTPLRPRCGECGISELCPSAFKET 217
            INPLLVGFGQ ICTP+RPRC  C +S+LCP+AFKET
Sbjct: 325 AINPLLVGFGQMICTPIRPRCEACSVSKLCPAAFKET 361


>AT2G31450.1 | Symbols: ATNTH1 | DNA glycosylase superfamily protein
           | chr2:13401318-13404134 REVERSE LENGTH=379
          Length = 379

 Score =  355 bits (911), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 162/217 (74%), Positives = 190/217 (87%)

Query: 1   MRCSAEAPVDTMGCEKAGNTLPPKERRFAVLVSSLLSSQTKDHVNHGAIQRLLQNDLLTA 60
           MR S +APVD+MGC+KAG+ LPP ERRFAVL+ +LLSSQTKD VN+ AI RL QN LLT 
Sbjct: 147 MRSSEDAPVDSMGCDKAGSFLPPTERRFAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTP 206

Query: 61  DAINNADEETIKKLIYPVGFYTRKATNLKKIANICLMKYDGDIPNSLEQLLLLPGIGPKM 120
           +A++ ADE TIK+LIYPVGFYTRKAT +KKIA ICL+KYDGDIP+SL+ LL LPGIGPKM
Sbjct: 207 EAVDKADESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDLLSLPGIGPKM 266

Query: 121 AHLVMNVGWNNVQGICVDTHVHRICNRLGWVSRLGTKQKTLTPEQTREALQRWLPREEWD 180
           AHL++++ WN+VQGICVDTHVHRICNRLGWVSR GTKQKT +PE+TR ALQ+WLP+EEW 
Sbjct: 267 AHLILHIAWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWV 326

Query: 181 PINPLLVGFGQTICTPLRPRCGECGISELCPSAFKET 217
            INPLLVGFGQ ICTP+RPRC  C +S+LCP+AFKET
Sbjct: 327 AINPLLVGFGQMICTPIRPRCEACSVSKLCPAAFKET 363


>AT1G05900.2 | Symbols: ATNTH2, NTH2 | endonuclease III 2 |
           chr1:1786896-1789502 FORWARD LENGTH=386
          Length = 386

 Score =  342 bits (876), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 155/217 (71%), Positives = 187/217 (86%)

Query: 1   MRCSAEAPVDTMGCEKAGNTLPPKERRFAVLVSSLLSSQTKDHVNHGAIQRLLQNDLLTA 60
           M+ S EAPV+ + C++ G+ LPPKERRF VL+ +LLSSQTK+H+   A++RL QN LLT 
Sbjct: 154 MKPSEEAPVNAVECDRTGSFLPPKERRFYVLIGTLLSSQTKEHITGAAVERLHQNGLLTP 213

Query: 61  DAINNADEETIKKLIYPVGFYTRKATNLKKIANICLMKYDGDIPNSLEQLLLLPGIGPKM 120
           +AI+ ADE TIK+LIYPVGFYTRKATN+KK+A ICLM+YDGDIP +LE+LL LPG+GPK+
Sbjct: 214 EAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKI 273

Query: 121 AHLVMNVGWNNVQGICVDTHVHRICNRLGWVSRLGTKQKTLTPEQTREALQRWLPREEWD 180
           AHLV++V WN+VQGICVDTHVHRICNRLGWVS+ GTKQKT +PE+TR ALQ+WLP+ EW 
Sbjct: 274 AHLVLHVAWNDVQGICVDTHVHRICNRLGWVSKPGTKQKTSSPEETRVALQQWLPKGEWV 333

Query: 181 PINPLLVGFGQTICTPLRPRCGECGISELCPSAFKET 217
            IN LLVGFGQTICTPLRP CG C I+E+CPSAFKET
Sbjct: 334 AINFLLVGFGQTICTPLRPHCGTCSITEICPSAFKET 370


>AT1G05900.1 | Symbols: ATNTH2, NTH2 | endonuclease III 2 |
           chr1:1786896-1789037 FORWARD LENGTH=314
          Length = 314

 Score =  248 bits (633), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 111/158 (70%), Positives = 137/158 (86%)

Query: 1   MRCSAEAPVDTMGCEKAGNTLPPKERRFAVLVSSLLSSQTKDHVNHGAIQRLLQNDLLTA 60
           M+ S EAPV+ + C++ G+ LPPKERRF VL+ +LLSSQTK+H+   A++RL QN LLT 
Sbjct: 154 MKPSEEAPVNAVECDRTGSFLPPKERRFYVLIGTLLSSQTKEHITGAAVERLHQNGLLTP 213

Query: 61  DAINNADEETIKKLIYPVGFYTRKATNLKKIANICLMKYDGDIPNSLEQLLLLPGIGPKM 120
           +AI+ ADE TIK+LIYPVGFYTRKATN+KK+A ICLM+YDGDIP +LE+LL LPG+GPK+
Sbjct: 214 EAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKI 273

Query: 121 AHLVMNVGWNNVQGICVDTHVHRICNRLGWVSRLGTKQ 158
           AHLV++V WN+VQGICVDTHVHRICNRLGWVS+ GTKQ
Sbjct: 274 AHLVLHVAWNDVQGICVDTHVHRICNRLGWVSKPGTKQ 311


>AT3G47830.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr3:17647069-17648346 FORWARD LENGTH=293
          Length = 293

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 75/176 (42%), Gaps = 22/176 (12%)

Query: 31  LVSSLLSSQTKDHVNHGAIQRLLQNDLLTADAINNADEETIKKLIYPVGFYTRKATNLKK 90
           LV  LLS  T +  +  A   L +      D + NA+ ++I+  I   G   +KA  +K 
Sbjct: 100 LVKILLSQNTTESNSQRAFASL-KATFPKWDDVLNAESKSIENAIRCGGLAPKKAVCIKN 158

Query: 91  IAN--------ICLMKYDG-DIPNSLEQLLLLPGIGPKMAH--LVMNVGWNNVQGICVDT 139
           I N        +CL    G  +     +L    G+GPK     L+ N+  N+     VDT
Sbjct: 159 ILNRLQNERGRLCLEYLRGLSVEEVKTELSHFKGVGPKTVSCVLMFNLQHNDFP---VDT 215

Query: 140 HVHRICNRLGWVSRLGTKQKTLTPEQTREALQRWLPREEWDPINPLLVGFGQTICT 195
           HV  I   LGWV +   + KT         L R +P E    +N LL   G+ IC+
Sbjct: 216 HVFEIAKALGWVPKTADRNKTYV------HLNRKIPDELKFDLNCLLYTHGK-ICS 264