Miyakogusa Predicted Gene

Lj3g3v3271550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3271550.1 tr|G7IUG4|G7IUG4_MEDTR Bifunctional protein aas
OS=Medicago truncatula GN=MTR_2g098490 PE=4
SV=1,73.49,0,PHOSPHOPANTETHEINE,Phosphopantetheine attachment site;
ACYL-COA SYNTHETASE-RELATED,NULL; DISCO-INTER,CUFF.45539.1
         (1134 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75960.1 | Symbols:  | AMP-dependent synthetase and ligase fa...    63   1e-09
AT5G63380.1 | Symbols:  | AMP-dependent synthetase and ligase fa...    61   4e-09
AT1G20500.1 | Symbols:  | AMP-dependent synthetase and ligase fa...    59   3e-08
AT5G38120.1 | Symbols: 4CL8 | AMP-dependent synthetase and ligas...    57   7e-08
AT4G05160.1 | Symbols:  | AMP-dependent synthetase and ligase fa...    56   1e-07
AT1G20510.1 | Symbols: OPCL1 | OPC-8:0 CoA ligase1 | chr1:710364...    55   2e-07
AT1G20480.1 | Symbols:  | AMP-dependent synthetase and ligase fa...    53   1e-06
AT1G20510.2 | Symbols: OPCL1 | OPC-8:0 CoA ligase1 | chr1:710393...    52   3e-06

>AT1G75960.1 | Symbols:  | AMP-dependent synthetase and ligase
           family protein | chr1:28518187-28519821 FORWARD
           LENGTH=544
          Length = 544

 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 103/245 (42%), Gaps = 58/245 (23%)

Query: 4   GYGLAENC-VFVSCAF--------GQDKPVIVDWQGRVCCGYVPHQDADVDIRIVDPETC 54
           GYGL E   V VSCA+          D+  +   QG    G+        +I +VDPE+ 
Sbjct: 327 GYGLTETAGVIVSCAWKPNWNRLPASDQAQLKSRQGVRTVGFS-------EIDVVDPESG 379

Query: 55  EELQEDGKE-GEIWISSPSAGVGYWGREELSQKTFRNELQNQPGLNYTRTGDLGRVI-DQ 112
             ++ DG+  GEI +   S  +GY      +Q +F+N         +  TGDLG +  D 
Sbjct: 380 RSVERDGETVGEIVLRGSSIMLGYLKNPIGTQNSFKN--------GWFFTGDLGVIHGDG 431

Query: 113 KLFITGRIKDLIIVAGRNIYSADVEKTVENSSEFLRPGC--CAVVGVPEEILSAKGISIP 170
            L I  R KD+II  G N+ S +VE  +     +  P     AVV  P+E          
Sbjct: 432 YLEIKDRSKDVIISGGENVSSVEVEAVL-----YTNPAVNEAAVVARPDEFW-------- 478

Query: 171 DGSDQVGLVVIAEVRDGKPVTKEVVESIKTCVAEEHGVSVASIKLVKPRTIS------KT 224
            G      V +      KP  KE++E  K  +           + + P+T+S      KT
Sbjct: 479 -GETPCAFVSLKPGLTRKPTDKEIIEYCKYKMP----------RYMAPKTVSFLEELPKT 527

Query: 225 TSGKI 229
           ++GKI
Sbjct: 528 STGKI 532


>AT5G63380.1 | Symbols:  | AMP-dependent synthetase and ligase
           family protein | chr5:25387581-25390026 REVERSE
           LENGTH=562
          Length = 562

 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 20/158 (12%)

Query: 4   GYGLAENCVFVSCAFGQDKPVIVDWQGRVCCGYVPHQDADVDIRIVDPETCEELQEDGKE 63
           GYGL E+    +  FG ++ V     GR+          +++ +IVDP T E L   GK 
Sbjct: 353 GYGLTESSGPAASTFGPEEMVKYGSVGRIS--------ENMEAKIVDPSTGESLPP-GKT 403

Query: 64  GEIWISSPSAGVGYWGREELSQKTFRNELQNQPGLNYTRTGDLGRVIDQK-LFITGRIKD 122
           GE+W+  P    GY G E+ S +T   E        + +TGDL     +  L+I  R+K+
Sbjct: 404 GELWLRGPVIMKGYVGNEKASAETVDKE-------GWLKTGDLCYFDSEDFLYIVDRLKE 456

Query: 123 LIIVAGRNIYSADVEKTVENSSEFLRPGCCAVVGVPEE 160
           LI      +   ++E+ + ++ + +     AVV  P+E
Sbjct: 457 LIKYKAYQVPPVELEQILHSNPDVID---AAVVPFPDE 491


>AT1G20500.1 | Symbols:  | AMP-dependent synthetase and ligase
           family protein | chr1:7100502-7102847 REVERSE LENGTH=550
          Length = 550

 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 29/197 (14%)

Query: 42  ADVDIRIVDPETCEELQEDGKEGEIWISSPSAGVGYWGREELSQKTFRNELQNQPGLNYT 101
           +DV+ RIVDP T   +  + + GE+W+  PS   GY+  +E + +T   E        + 
Sbjct: 375 SDVEARIVDPNTGRFMGIN-QTGELWLKGPSISKGYFKNQEATNETINLE-------GWL 426

Query: 102 RTGDLGRVI-DQKLFITGRIKDLIIVAGRNIYSADVEKTVENSSEFLRPGCCAVVGVPEE 160
           +TGDL  +  D  LF+  R+K+LI   G  +  A++E               A++    +
Sbjct: 427 KTGDLCYIDEDGFLFVVDRLKELIKYKGYQVPPAELE---------------ALLITHPD 471

Query: 161 ILSAKGISIPDG-SDQVGLVVIAEVRDGKPVTKEVVESIKTCVAEEHGVSVASIKLVKPR 219
           IL A  I  PD  + Q  +  +    +     K+V++ I   VA    +   S       
Sbjct: 472 ILDAAVIPFPDKEAGQYPMAYVVRKHESNLSEKQVIDFISKQVAPYKKIRKVSFI----N 527

Query: 220 TISKTTSGKIRRFECIK 236
           +I KT SGK  R + IK
Sbjct: 528 SIPKTASGKTLRKDLIK 544


>AT5G38120.1 | Symbols: 4CL8 | AMP-dependent synthetase and ligase
           family protein | chr5:15213773-15216137 FORWARD
           LENGTH=550
          Length = 550

 Score = 57.0 bits (136), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 90/209 (43%), Gaps = 40/209 (19%)

Query: 30  GRVCCGYVPHQDADVDIRIVDPETCEELQEDGKEGEIWISSPSAGVGYWGREELSQKTFR 89
           G + CG        V+ RIVDP T + +  + + GE+W+  PS   GY          FR
Sbjct: 374 GLLSCG--------VEARIVDPNTGQVMGLN-QTGELWLKGPSIAKGY----------FR 414

Query: 90  NELQNQPGLNYTRTGDLGRVI-DQKLFITGRIKDLIIVAGRNIYSADVEKTVENSSEFLR 148
           NE +      + +TGDL  +  D  LFI  R+K+LI   G  +  A++E  + N      
Sbjct: 415 NEEEIITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHP---- 470

Query: 149 PGCCAVVGVPEEILSAKGISIPDG-SDQVGLVVIAEVRDGKPVTKEVVESIKTCVAEEHG 207
                      +IL A  I  PD  + Q  +  +A   +     K+V++ I   VA    
Sbjct: 471 -----------DILDAAVIPFPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKK 519

Query: 208 VSVASIKLVKPRTISKTTSGKIRRFECIK 236
           +     K+    +I KT SGK  R + IK
Sbjct: 520 IR----KVAFIDSIPKTPSGKTLRKDLIK 544


>AT4G05160.1 | Symbols:  | AMP-dependent synthetase and ligase
           family protein | chr4:2664451-2666547 FORWARD LENGTH=544
          Length = 544

 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 43/239 (17%)

Query: 4   GYGLAENCVFVSCAFGQDKPVIVDWQGRVCCGYVPHQDADVDIRIVDPETCEELQEDGKE 63
           GYG+ E C  VS     + P +    G+   G        V+ +IV  ET +  Q   ++
Sbjct: 339 GYGMTETCGIVSV----EDPRL----GKRNSGSAGMLAPGVEAQIVSVETGKS-QPPNQQ 389

Query: 64  GEIWISSPSAGVGYWGREELSQKTFRNELQNQPGLNYTRTGDLGRVI-DQKLFITGRIKD 122
           GEIW+  P+   GY    + +++T   +       ++  TGDLG    D  L++  RIK+
Sbjct: 390 GEIWVRGPNMMKGYLNNPQATKETIDKK-------SWVHTGDLGYFNEDGNLYVVDRIKE 442

Query: 123 LIIVAGRNIYSADVEKTVENSSEFLRPGCCAVVGVPEEILSAKGISIPDGSDQVGLVVIA 182
           LI   G  +  A++E                +V  P +IL A  I  PD  ++ G V IA
Sbjct: 443 LIKYKGFQVAPAELE--------------GLLVSHP-DILDAVVIPFPD--EEAGEVPIA 485

Query: 183 EVRDGKPVTKEVVESIKTCVAEEHGVSVASIKLVKPRT----ISKTTSGKIRRFECIKQ 237
            V    P +    + I+  +A++    VA  K ++  +    + K+ +GKI R E ++Q
Sbjct: 486 FVVRS-PNSSITEQDIQKFIAKQ----VAPYKRLRRVSFISLVPKSAAGKILRRELVQQ 539


>AT1G20510.1 | Symbols: OPCL1 | OPC-8:0 CoA ligase1 |
           chr1:7103645-7105856 REVERSE LENGTH=546
          Length = 546

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 103/237 (43%), Gaps = 41/237 (17%)

Query: 4   GYGLAENCVFVSCAFGQDKPVIVDWQGRVCCGYVPHQDADVDIRIVDPETCEELQEDGKE 63
           GYGL E     S   G     + + +     G +    A ++ RIVDP T + L    + 
Sbjct: 339 GYGLTE-----STGIGASTDTVEESRRYGTAGKL---SASMEGRIVDPVTGQILGPK-QT 389

Query: 64  GEIWISSPSAGVGYWGREELSQKTFRNELQNQPGLNYTRTGDLGRVI-DQKLFITGRIKD 122
           GE+W+  PS   GY+  EE +  T  +E        + RTGDL  +  D  +F+  R+K+
Sbjct: 390 GELWLKGPSIMKGYFSNEEATSSTLDSE-------GWLRTGDLCYIDEDGFIFVVDRLKE 442

Query: 123 LIIVAGRNIYSADVEKTVENSSEFLRPGCCAVVGVPEEILSAKGISIPDGSDQVGLVVIA 182
           LI   G  +  A++E               A++    EI  A  I  PD   +VG   +A
Sbjct: 443 LIKYKGYQVAPAELE---------------ALLLTHPEITDAAVIPFPD--KEVGQFPMA 485

Query: 183 EV--RDGKPVT-KEVVESIKTCVAEEHGVSVASIKLVKPRTISKTTSGKIRRFECIK 236
            V  + G  ++ K ++E +   VA    +     K+    +I K  SGKI R + IK
Sbjct: 486 YVVRKTGSSLSEKTIMEFVAKQVAPYKRIR----KVAFVSSIPKNPSGKILRKDLIK 538


>AT1G20480.1 | Symbols:  | AMP-dependent synthetase and ligase
           family protein | chr1:7094978-7097073 REVERSE LENGTH=565
          Length = 565

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 53/243 (21%)

Query: 4   GYGLAENCVFVSCAFGQDKPVIVDWQGRVCCGYVPHQDADVDIRIVDPETCEELQEDGKE 63
           GYGL E+    +  F +++       G +          +V+ +IVDP+T   L  + + 
Sbjct: 360 GYGLTESTAIAASMFNKEETKRYGASGLLA--------PNVEGKIVDPDTGRVLGVN-QT 410

Query: 64  GEIWISSPSAGVGYWGREELSQKTFRNELQNQPGLNYTRTGDLGRVI-DQKLFITGRIKD 122
           GE+WI SP+   GY+  +E +  T  +E        + +TGDL  +  D  +F+  R+K+
Sbjct: 411 GELWIRSPTVMKGYFKNKEATASTIDSE-------GWLKTGDLCYIDGDGFVFVVDRLKE 463

Query: 123 LIIVAGRNIYSADVEKTVENSSEFLRPGCCAVVGVPEEILSAKGISIPDGSDQVGLVVIA 182
           LI   G  +  A++E               A++    EI  A  I IPD           
Sbjct: 464 LIKCNGYQVAPAELE---------------ALLLAHPEIADAAVIPIPD----------- 497

Query: 183 EVRDGKPVTKEVVESIKTCVAEEH-----GVSVASIKLVKPRT----ISKTTSGKIRRFE 233
            ++ G+     +V  + + ++E          V+  K ++  T    I K  SGKI R E
Sbjct: 498 -MKAGQYPMAYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVTFLASIPKNPSGKILRRE 556

Query: 234 CIK 236
             K
Sbjct: 557 LTK 559


>AT1G20510.2 | Symbols: OPCL1 | OPC-8:0 CoA ligase1 |
           chr1:7103939-7105856 REVERSE LENGTH=473
          Length = 473

 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 17/135 (12%)

Query: 4   GYGLAENCVFVSCAFGQDKPVIVDWQGRVCCGYVPHQDADVDIRIVDPETCEELQEDGKE 63
           GYGL E     S   G     + + +     G +    A ++ RIVDP T + L    + 
Sbjct: 339 GYGLTE-----STGIGASTDTVEESRRYGTAGKL---SASMEGRIVDPVTGQILGPK-QT 389

Query: 64  GEIWISSPSAGVGYWGREELSQKTFRNELQNQPGLNYTRTGDLGRVI-DQKLFITGRIKD 122
           GE+W+  PS   GY+  EE +  T  +E        + RTGDL  +  D  +F+  R+K+
Sbjct: 390 GELWLKGPSIMKGYFSNEEATSSTLDSE-------GWLRTGDLCYIDEDGFIFVVDRLKE 442

Query: 123 LIIVAGRNIYSADVE 137
           LI   G  +  A++E
Sbjct: 443 LIKYKGYQVAPAELE 457