Miyakogusa Predicted Gene
- Lj3g3v3271520.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3271520.2 Non Chatacterized Hit- tr|I1LQG9|I1LQG9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.19,0,JMJC
DOMAIN-CONTAINING PROTEIN,NULL; HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
INHIBITOR-RELATED,NULL; seg,NU,CUFF.45541.2
(399 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20810.1 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and Fe(II)-d... 490 e-139
AT3G20810.2 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and Fe(II)-d... 485 e-137
AT3G20810.3 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and Fe(II)-d... 482 e-136
AT5G19840.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depend... 89 5e-18
AT5G19840.2 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depend... 89 6e-18
AT5G06550.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Transcript... 55 7e-08
AT5G63080.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depend... 51 1e-06
>AT3G20810.1 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and
Fe(II)-dependent oxygenase superfamily protein |
chr3:7275814-7278144 FORWARD LENGTH=418
Length = 418
Score = 490 bits (1261), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/386 (62%), Positives = 283/386 (73%), Gaps = 21/386 (5%)
Query: 18 TPMLDKESPALLHTICEHGGYA-------------------PEMAWEQLHSGPWHSVLPV 58
TP LD ES LL +I GGYA +MAWEQLHSGPWHSVLPV
Sbjct: 19 TPTLDAESQTLLQSISAEGGYAYARMAVLAVAGDQSAAEAARDMAWEQLHSGPWHSVLPV 78
Query: 59 WRDAYSMACLHVARHHYCNGEFKEALRALDMGIIMGGPLLRKDL-DSAIEKVSEKAWCVR 117
WRDAYSMACLHVA+ H+ GEF EAL ALDMG+IMGG LLRKDL DS + SE +
Sbjct: 79 WRDAYSMACLHVAKIHFAAGEFGEALGALDMGLIMGGMLLRKDLHDSVLLVSSEARKMTK 138
Query: 118 VSERSNQDFGNSEHPLVDHEFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLQDHYLSGS 177
E ++ DF E + + D FL+D+YL G+
Sbjct: 139 SLEEASGDF-KGERLVPEVPVDVNEVLKILPCRSLTCKRVEKRSGLSLEGFLRDYYLPGT 197
Query: 178 PVIISDCMSHWPAKAKWNNMDYLLRVAGDRTVPVEVGKNYICADWKQELITFSEFLERIK 237
PV+I++ M+HWPA+ KWN++DYL VAG+RTVPVEVGKNY+C+DWKQEL+TFS+FLER++
Sbjct: 198 PVVITNSMAHWPARTKWNHLDYLNAVAGNRTVPVEVGKNYLCSDWKQELVTFSKFLERMR 257
Query: 238 SHGCSPGGPTYLAQHPLFDQIHELRKDILIPDYCFTGGGELRSLNAWFGPAGTVTPLHHD 297
++ SP PTYLAQHPLFDQI+ELR DI IPDYCF GGGEL+SLNAWFGPAGTVTPLHHD
Sbjct: 258 TNKSSPMEPTYLAQHPLFDQINELRDDICIPDYCFVGGGELQSLNAWFGPAGTVTPLHHD 317
Query: 298 PHHNILAQVVGKKYIRLYSASLSDELFPYSETMLCNSSQVDLDDVDESKFPKVQDLEFVD 357
PHHNILAQVVGKKYIRLY + L DEL+PYSETMLCNSSQVDLD++DE++FPK +LEF+D
Sbjct: 318 PHHNILAQVVGKKYIRLYPSFLQDELYPYSETMLCNSSQVDLDNIDETEFPKAMELEFMD 377
Query: 358 CILEEGEMLYIPPKWWHYVRSLTTSL 383
CILEEGEMLYIPPKWWHYVRSLT SL
Sbjct: 378 CILEEGEMLYIPPKWWHYVRSLTMSL 403
>AT3G20810.2 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and
Fe(II)-dependent oxygenase superfamily protein |
chr3:7275814-7278144 FORWARD LENGTH=429
Length = 429
Score = 485 bits (1248), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/396 (61%), Positives = 284/396 (71%), Gaps = 30/396 (7%)
Query: 18 TPMLDKESPALLHTICEHGGYA-------------------PEMAWEQLHSGPWHSVLPV 58
TP LD ES LL +I GGYA +MAWEQLHSGPWHSVLPV
Sbjct: 19 TPTLDAESQTLLQSISAEGGYAYARMAVLAVAGDQSAAEAARDMAWEQLHSGPWHSVLPV 78
Query: 59 WRDAYSMACLHVARHHYCNGEFKEALRALDMGIIMGGPLLRKDL-DSAIEKVSEKAWCVR 117
WRDAYSMACLHVA+ H+ GEF EAL ALDMG+IMGG LLRKDL DS + SE +
Sbjct: 79 WRDAYSMACLHVAKIHFAAGEFGEALGALDMGLIMGGMLLRKDLHDSVLLVSSEARKMTK 138
Query: 118 VSERSNQDFGNS----EHPLVDHEFDXXXXXXXXXX------XXXXXXXXXXXXXXXXXX 167
E ++ DF E P+ +E
Sbjct: 139 SLEEASGDFKGERLVPEVPVDVNEVRHVLANLQLLVLKILPCRSLTCKRVEKRSGLSLEG 198
Query: 168 FLQDHYLSGSPVIISDCMSHWPAKAKWNNMDYLLRVAGDRTVPVEVGKNYICADWKQELI 227
FL+D+YL G+PV+I++ M+HWPA+ KWN++DYL VAG+RTVPVEVGKNY+C+DWKQEL+
Sbjct: 199 FLRDYYLPGTPVVITNSMAHWPARTKWNHLDYLNAVAGNRTVPVEVGKNYLCSDWKQELV 258
Query: 228 TFSEFLERIKSHGCSPGGPTYLAQHPLFDQIHELRKDILIPDYCFTGGGELRSLNAWFGP 287
TFS+FLER++++ SP PTYLAQHPLFDQI+ELR DI IPDYCF GGGEL+SLNAWFGP
Sbjct: 259 TFSKFLERMRTNKSSPMEPTYLAQHPLFDQINELRDDICIPDYCFVGGGELQSLNAWFGP 318
Query: 288 AGTVTPLHHDPHHNILAQVVGKKYIRLYSASLSDELFPYSETMLCNSSQVDLDDVDESKF 347
AGTVTPLHHDPHHNILAQVVGKKYIRLY + L DEL+PYSETMLCNSSQVDLD++DE++F
Sbjct: 319 AGTVTPLHHDPHHNILAQVVGKKYIRLYPSFLQDELYPYSETMLCNSSQVDLDNIDETEF 378
Query: 348 PKVQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSL 383
PK +LEF+DCILEEGEMLYIPPKWWHYVRSLT SL
Sbjct: 379 PKAMELEFMDCILEEGEMLYIPPKWWHYVRSLTMSL 414
>AT3G20810.3 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and
Fe(II)-dependent oxygenase superfamily protein |
chr3:7275814-7278182 FORWARD LENGTH=398
Length = 398
Score = 482 bits (1240), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/380 (62%), Positives = 278/380 (73%), Gaps = 21/380 (5%)
Query: 18 TPMLDKESPALLHTICEHGGYA-------------------PEMAWEQLHSGPWHSVLPV 58
TP LD ES LL +I GGYA +MAWEQLHSGPWHSVLPV
Sbjct: 19 TPTLDAESQTLLQSISAEGGYAYARMAVLAVAGDQSAAEAARDMAWEQLHSGPWHSVLPV 78
Query: 59 WRDAYSMACLHVARHHYCNGEFKEALRALDMGIIMGGPLLRKDL-DSAIEKVSEKAWCVR 117
WRDAYSMACLHVA+ H+ GEF EAL ALDMG+IMGG LLRKDL DS + SE +
Sbjct: 79 WRDAYSMACLHVAKIHFAAGEFGEALGALDMGLIMGGMLLRKDLHDSVLLVSSEARKMTK 138
Query: 118 VSERSNQDFGNSEHPLVDHEFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLQDHYLSGS 177
E ++ DF E + + D FL+D+YL G+
Sbjct: 139 SLEEASGDF-KGERLVPEVPVDVNEVLKILPCRSLTCKRVEKRSGLSLEGFLRDYYLPGT 197
Query: 178 PVIISDCMSHWPAKAKWNNMDYLLRVAGDRTVPVEVGKNYICADWKQELITFSEFLERIK 237
PV+I++ M+HWPA+ KWN++DYL VAG+RTVPVEVGKNY+C+DWKQEL+TFS+FLER++
Sbjct: 198 PVVITNSMAHWPARTKWNHLDYLNAVAGNRTVPVEVGKNYLCSDWKQELVTFSKFLERMR 257
Query: 238 SHGCSPGGPTYLAQHPLFDQIHELRKDILIPDYCFTGGGELRSLNAWFGPAGTVTPLHHD 297
++ SP PTYLAQHPLFDQI+ELR DI IPDYCF GGGEL+SLNAWFGPAGTVTPLHHD
Sbjct: 258 TNKSSPMEPTYLAQHPLFDQINELRDDICIPDYCFVGGGELQSLNAWFGPAGTVTPLHHD 317
Query: 298 PHHNILAQVVGKKYIRLYSASLSDELFPYSETMLCNSSQVDLDDVDESKFPKVQDLEFVD 357
PHHNILAQVVGKKYIRLY + L DEL+PYSETMLCNSSQVDLD++DE++FPK +LEF+D
Sbjct: 318 PHHNILAQVVGKKYIRLYPSFLQDELYPYSETMLCNSSQVDLDNIDETEFPKAMELEFMD 377
Query: 358 CILEEGEMLYIPPKWWHYVR 377
CILEEGEMLYIPPKWWHYVR
Sbjct: 378 CILEEGEMLYIPPKWWHYVR 397
>AT5G19840.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr5:6705372-6709382
FORWARD LENGTH=505
Length = 505
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 106/250 (42%), Gaps = 52/250 (20%)
Query: 174 LSGSPVIISDCMSHWPAKAKWN----NMDYLLRVAGD--------RTVPVEVGKNYICAD 221
L+ P + C S W A +KWN +DYL AG RT PV G
Sbjct: 28 LTNFPAVFRGCASVWDAYSKWNPFNSGLDYLEERAGSVEVEAMLSRTAPVFNGD---IRS 84
Query: 222 WKQELITFSEFLERIKSHGCSPG---------------------GPTYLAQHPLFDQIHE 260
++ + FS+F+ K H G G YLAQ P+ + E
Sbjct: 85 HERVSLPFSDFIRFCKQHMRGKGNGSGVDAKSADLNPMCEDYRPGQIYLAQFPILNDEKE 144
Query: 261 -------LRKDILIPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIR 313
LR+DI P F L S+N W A + H+DPHHN+L V G+K +
Sbjct: 145 EKVLLKILRQDIQTP--TFLDAKSLSSINFWMNSAEARSSTHYDPHHNLLCVVSGRKKVV 202
Query: 314 LYSASLSDELFP---YSETMLCNSSQVDLDDVDESKFPKVQD--LEFVDCILEEGEMLYI 368
L+ S S L+P Y E N S V L++ + S +P+ + + + L G+ ++I
Sbjct: 203 LWPPSASPSLYPMPIYGEA--SNHSSVGLENPNLSDYPRAEHSLKQSQEITLNAGDAVFI 260
Query: 369 PPKWWHYVRS 378
P W+H V S
Sbjct: 261 PEGWFHQVDS 270
>AT5G19840.2 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr5:6705372-6709063
FORWARD LENGTH=549
Length = 549
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 106/250 (42%), Gaps = 52/250 (20%)
Query: 174 LSGSPVIISDCMSHWPAKAKWN----NMDYLLRVAGD--------RTVPVEVGKNYICAD 221
L+ P + C S W A +KWN +DYL AG RT PV G
Sbjct: 28 LTNFPAVFRGCASVWDAYSKWNPFNSGLDYLEERAGSVEVEAMLSRTAPVFNGD---IRS 84
Query: 222 WKQELITFSEFLERIKSHGCSPG---------------------GPTYLAQHPLFDQIHE 260
++ + FS+F+ K H G G YLAQ P+ + E
Sbjct: 85 HERVSLPFSDFIRFCKQHMRGKGNGSGVDAKSADLNPMCEDYRPGQIYLAQFPILNDEKE 144
Query: 261 -------LRKDILIPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIR 313
LR+DI P F L S+N W A + H+DPHHN+L V G+K +
Sbjct: 145 EKVLLKILRQDIQTP--TFLDAKSLSSINFWMNSAEARSSTHYDPHHNLLCVVSGRKKVV 202
Query: 314 LYSASLSDELFP---YSETMLCNSSQVDLDDVDESKFPKVQD--LEFVDCILEEGEMLYI 368
L+ S S L+P Y E N S V L++ + S +P+ + + + L G+ ++I
Sbjct: 203 LWPPSASPSLYPMPIYGEA--SNHSSVGLENPNLSDYPRAEHSLKQSQEITLNAGDAVFI 260
Query: 369 PPKWWHYVRS 378
P W+H V S
Sbjct: 261 PEGWFHQVDS 270
>AT5G06550.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Transcription
factor jumonji/aspartyl beta-hydroxylase
(InterPro:IPR003347), F-box domain, Skp2-like
(InterPro:IPR022364), Transcription factor jumonji
(InterPro:IPR013129); BEST Arabidopsis thaliana protein
match is: transferases, transferring glycosyl groups
(TAIR:AT1G78280.1); Has 1762 Blast hits to 1747 proteins
in 292 species: Archae - 0; Bacteria - 297; Metazoa -
877; Fungi - 168; Plants - 221; Viruses - 0; Other
Eukaryotes - 199 (source: NCBI BLink). |
chr5:2001246-2003068 REVERSE LENGTH=502
Length = 502
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 30/229 (13%)
Query: 168 FLQDHYLSGSPVIISDCMSHWPAKAKWNNMDYLLRVAGDRTVPVEVGKNYICADWKQELI 227
F+ PV++ C+ WPA KW+ DYL +V GD V VG + +L
Sbjct: 205 FITKFEEPNKPVLLEGCLDGWPAIEKWSR-DYLTKVVGD--VEFAVGPV------EMKLE 255
Query: 228 TFSEFLERIKSHGCSPGGPTYLAQHPLFDQIHELRKDILIPDY----CFTGGGELRSLNA 283
+ + S G P YL +++ L + +P Y F G R
Sbjct: 256 KYFRY-----SDGAREERPLYLFDPKFAEKVPVLDSEYDVPVYFREDLFGVLGNERPDYR 310
Query: 284 WF--GPAGTVTPLHHDPHHNIL--AQVVGKKYIRLYSASLSDELF---PYSETMLCNSSQ 336
W GPAG+ + H DP+ A + G K L+ + P + C S
Sbjct: 311 WIIIGPAGSGSSFHIDPNSTSAWNAVITGSKKWVLFPPDVVPPGVHPSPDGAEVACPVSI 370
Query: 337 VD--LDDVDESKFPKVQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSL 383
++ ++ D++K + + +E CI + GE++++P WWH V +L S+
Sbjct: 371 IEWFMNFYDDTKDWEKKPIE---CICKAGEVMFVPNGWWHLVINLEESI 416
>AT5G63080.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr5:25300026-25302321
REVERSE LENGTH=462
Length = 462
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 98/256 (38%), Gaps = 53/256 (20%)
Query: 168 FLQDHYLSGSPVIISDCMSHWPAKAKWN------NMDYLLRVAGDRTVPVEVGKNYICAD 221
F + + PV+ISD W A+ W N+ G V V D
Sbjct: 22 FAERYLAKNQPVVISDLTEDWRAREDWVSENGNPNLHVFATHFGKSRVQVADCDTREFTD 81
Query: 222 WKQELITFSEFLER-------------IKSHGCSPGGPTYLAQH--PLFD---------- 256
K+ ++ +EF+E+ +K P Y A PLF
Sbjct: 82 QKRLEMSVTEFVEQWTNKDSIEESVLYLKDWHFVKEYPDYTAYQTPPLFSDDWLNVYLDN 141
Query: 257 -QIHELRK------DILIPDYCFTGGGELRSLNAWFGPAGTVTPLHHD--PHHNILAQVV 307
Q+HE R I DY F + G G+ TPLH D ++ A V
Sbjct: 142 YQMHEDRDSFQKYDQISCSDYRF----------VYMGGKGSWTPLHADVFRSYSWSANVC 191
Query: 308 GKKYIRLYSASLSDELFPYSETMLCNSSQVDLDDVDESKFPKVQDLEFVDCILEEGEMLY 367
GKK S ++ + + N ++V+E+KFP + +++CI E GE+++
Sbjct: 192 GKKRWLFLPPPQSHLVY---DRYMKNCVYDIFEEVNETKFPGFKKTTWLECIQEPGEIIF 248
Query: 368 IPPKWWHYVRSLTTSL 383
+P W H V +L ++
Sbjct: 249 VPSGWHHQVYNLEDTI 264