Miyakogusa Predicted Gene

Lj3g3v3243150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3243150.1 Non Chatacterized Hit- tr|I1HYC6|I1HYC6_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,70,3e-19,HMA,Heavy metal-associated domain, HMA; no
description,NULL; HGSCAVENGER,Mercury scavenger protein; ,CUFF.45511.1
         (70 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G63440.1 | Symbols: HMA5 | heavy metal atpase 5 | chr1:235276...    76   4e-15
AT5G44790.1 | Symbols: RAN1, HMA7 | copper-exporting ATPase / re...    67   2e-12

>AT1G63440.1 | Symbols: HMA5 | heavy metal atpase 5 |
           chr1:23527655-23531109 FORWARD LENGTH=995
          Length = 995

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 54/70 (77%), Gaps = 1/70 (1%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTCTSCS ++E  LQ ++GV++A V LA+EEA++ +DP L   ++++E IE+AGFEA LI
Sbjct: 138 MTCTSCSSTIERVLQSVNGVQRAHVALAIEEAEIHYDPRLSSYDRLLEEIENAGFEAVLI 197

Query: 61  NSRNDDMNKV 70
            S  +D++K+
Sbjct: 198 -STGEDVSKI 206



 Score = 62.8 bits (151), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 45/69 (65%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC++C+ SVE A++ + G+  AV+      A++LF PN VD   + E IEDAGFEA LI
Sbjct: 60  MTCSACAGSVEKAIKRLPGIHDAVIDALNNRAQILFYPNSVDVETIRETIEDAGFEASLI 119

Query: 61  NSRNDDMNK 69
            +  ++ ++
Sbjct: 120 ENEANERSR 128


>AT5G44790.1 | Symbols: RAN1, HMA7 | copper-exporting ATPase /
           responsive-to-antagonist 1 / copper-transporting ATPase
           (RAN1) | chr5:18075846-18079817 REVERSE LENGTH=1001
          Length = 1001

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 42/60 (70%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +CS SVE AL  ++GV KA V L    A V+FDPNLV    + EAIEDAGFEA+++
Sbjct: 65  MTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEAIEDAGFEAEIL 124



 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 44/66 (66%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +C  SVE  L+ + GVK+AVV L+    +V +DPN+++ + ++ AIEDAGFE  L+
Sbjct: 142 MTCAACVNSVEGILRDLPGVKRAVVALSTSLGEVEYDPNVINKDDIVNAIEDAGFEGSLV 201

Query: 61  NSRNDD 66
            S   D
Sbjct: 202 QSNQQD 207