Miyakogusa Predicted Gene
- Lj3g3v3241040.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3241040.1 Non Chatacterized Hit- tr|I1LJV4|I1LJV4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13221
PE,89.92,0,SUBFAMILY NOT NAMED,NULL; RING FINGER PROTEIN 6/12/38,NULL;
RING/U-box,NULL; ZF_RING_2,Zinc finger, ,CUFF.45504.1
(248 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 188 2e-48
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 188 2e-48
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 114 4e-26
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 107 7e-24
AT3G47180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 91 7e-19
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 89 4e-18
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 89 4e-18
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 82 3e-16
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 82 3e-16
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 81 6e-16
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 81 6e-16
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:... 81 7e-16
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 80 2e-15
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 80 2e-15
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 80 2e-15
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 77 9e-15
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 77 1e-14
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 75 4e-14
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 75 4e-14
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 72 3e-13
AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2:... 72 5e-13
AT2G37150.2 | Symbols: | RING/U-box superfamily protein | chr2:... 70 1e-12
AT2G37150.1 | Symbols: | RING/U-box superfamily protein | chr2:... 70 1e-12
AT2G37150.3 | Symbols: | RING/U-box superfamily protein | chr2:... 70 2e-12
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 70 2e-12
AT1G45180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 69 4e-12
AT5G07225.1 | Symbols: | RING/U-box superfamily protein | chr5:... 67 1e-11
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 65 3e-11
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 65 3e-11
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 63 2e-10
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 59 4e-09
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 6e-09
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 57 9e-09
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 9e-09
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 4e-08
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 55 4e-08
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 55 4e-08
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 55 4e-08
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 55 5e-08
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 6e-08
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 8e-08
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 54 8e-08
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 2e-07
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 2e-07
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 2e-07
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 53 2e-07
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 2e-07
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 3e-07
AT5G52150.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 3e-07
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 3e-07
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 3e-07
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 3e-07
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 3e-07
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 52 4e-07
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 4e-07
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 52 4e-07
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 52 4e-07
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 4e-07
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 5e-07
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 5e-07
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 6e-07
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 6e-07
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 51 6e-07
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 51 7e-07
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 7e-07
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 9e-07
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 50 1e-06
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 50 1e-06
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 1e-06
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 1e-06
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 1e-06
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 2e-06
AT5G54990.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 2e-06
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 2e-06
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 2e-06
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 3e-06
AT1G36950.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 4e-06
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 49 4e-06
AT5G01980.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 5e-06
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 6e-06
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 6e-06
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 48 6e-06
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 48 7e-06
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 48 7e-06
AT4G00305.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 8e-06
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 8e-06
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 47 8e-06
AT3G13228.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 9e-06
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 9e-06
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 9e-06
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 9e-06
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 9e-06
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 47 9e-06
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 1e-05
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 1e-05
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 141/247 (57%), Gaps = 13/247 (5%)
Query: 5 PHMEVHYNNISYPYSTAGSFIEYFEGLTYEHVNFIFSGASHAQESS-CPLNSGFYKFGLP 63
P + HY +PY+ GS+++++ G +N+ + H Q++ +N+ YKFG
Sbjct: 7 PVEDAHYTETGFPYAATGSYMDFYGGAAQGPLNYDHAATMHPQDNLYWTMNTNAYKFGFS 66
Query: 64 EPENTPYYRYGHDYEANHHEPLVDEYR-----RPSENSLTSNEQTAAGSTEWGEGGNPDT 118
+N +Y Y+ N H + R P N E T A S + G+ D
Sbjct: 67 GSDNASFYG---SYDMNDHLSRMSIGRTNWDYHPMVNVADDPENTVARSVQIGD---TDE 120
Query: 119 QDTSIECPRRHHSNSSDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPV 178
+ EC H S QV WQD+IDPD MTYEEL+ELGEAVGT+SRGL+ E I LP
Sbjct: 121 HSEAEECIANEHDPDSP-QVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPT 179
Query: 179 SKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYT 238
KYK G +K ERCVICQ++YK G++++ LPCKHVYH+ C ++WLSINK CP+C +
Sbjct: 180 KKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNS 239
Query: 239 EVFADKS 245
EVF + S
Sbjct: 240 EVFGEPS 246
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 141/247 (57%), Gaps = 13/247 (5%)
Query: 5 PHMEVHYNNISYPYSTAGSFIEYFEGLTYEHVNFIFSGASHAQESS-CPLNSGFYKFGLP 63
P + HY +PY+ GS+++++ G +N+ + H Q++ +N+ YKFG
Sbjct: 7 PVEDAHYTETGFPYAATGSYMDFYGGAAQGPLNYDHAATMHPQDNLYWTMNTNAYKFGFS 66
Query: 64 EPENTPYYRYGHDYEANHHEPLVDEYR-----RPSENSLTSNEQTAAGSTEWGEGGNPDT 118
+N +Y Y+ N H + R P N E T A S + G+ D
Sbjct: 67 GSDNASFYG---SYDMNDHLSRMSIGRTNWDYHPMVNVADDPENTVARSVQIGD---TDE 120
Query: 119 QDTSIECPRRHHSNSSDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPV 178
+ EC H S QV WQD+IDPD MTYEEL+ELGEAVGT+SRGL+ E I LP
Sbjct: 121 HSEAEECIANEHDPDSP-QVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPT 179
Query: 179 SKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYT 238
KYK G +K ERCVICQ++YK G++++ LPCKHVYH+ C ++WLSINK CP+C +
Sbjct: 180 KKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNS 239
Query: 239 EVFADKS 245
EVF + S
Sbjct: 240 EVFGEPS 246
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
Query: 137 QVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERC 196
Q W D +DPD ++YEELL LG+ VGT+SRGL+ + I+ LP +YK G + +E C
Sbjct: 232 QDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQNGTNESC 288
Query: 197 VICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEV 240
VIC+++Y+ + I LPCKH YH+ C N WL INK CP+C EV
Sbjct: 289 VICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEV 332
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 69/108 (63%), Gaps = 8/108 (7%)
Query: 142 DNIDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKY----KCGFFLRKKSR----D 193
+N DP+NMTYEEL ELG++VG +GL+ E+IS L KY K + L K + D
Sbjct: 172 ENNDPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADD 231
Query: 194 ERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVF 241
+C IC MEY +GDK TLPCKH+YH C ++WL NK C IC EV+
Sbjct: 232 SQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEVY 279
>AT3G47180.1 | Symbols: | RING/U-box superfamily protein |
chr3:17372821-17373453 REVERSE LENGTH=210
Length = 210
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
Query: 146 PDNMTYEELLELGEAVGTQSRGLTPEQIS-LLPVSKYKCGFFLRKKSRDERCVICQMEYK 204
PD ++YEEL+ LG+ +G ++RGLTP +IS L S Y F K+ +RCV+CQME++
Sbjct: 114 PDQLSYEELIALGDFIGVENRGLTPIEISTCLNASTY---VFSHNKNEIDRCVVCQMEFE 170
Query: 205 RGDKRITL-PCKHVYHASCGNRWLSINKACPICYTE 239
+ + L PC H YH+ C +WL K CPIC +E
Sbjct: 171 ERESLVVLRPCDHPYHSECITKWLETKKICPICCSE 206
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISL-LPVSKYK----CGFFLRKKSRDERCVI 198
+D DNM+YEELL LG+ +GT S L+ E +S L S Y+ G K D +C I
Sbjct: 418 LDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQETDETGSISLYKDDDIKCSI 477
Query: 199 CQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFADKS 245
CQ EY GD+ T+PC+H+YH SC +WL + CPIC T +KS
Sbjct: 478 CQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAEEEKS 524
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISL-LPVSKYK----CGFFLRKKSRDERCVI 198
+D DNM+YEELL LG+ +GT S L+ E +S L S Y+ G K D +C I
Sbjct: 418 LDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQETDETGSISLYKDDDIKCSI 477
Query: 199 CQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFADKS 245
CQ EY GD+ T+PC+H+YH SC +WL + CPIC T +KS
Sbjct: 478 CQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAEEEKS 524
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQI-SLLPVSKYK----CGFFLRKKSRDERCVI 198
+D DNM+YEELL L E +GT S L+ E + L S Y+ K D +C I
Sbjct: 411 LDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLNKDDDVKCSI 470
Query: 199 CQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYT 238
CQ EY GD+ TLPC+H YH SC +WL + CPIC T
Sbjct: 471 CQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKT 510
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQI-SLLPVSKYK----CGFFLRKKSRDERCVI 198
+D DNM+YEELL L E +GT S L+ E + L S Y+ K D +C I
Sbjct: 411 LDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLNKDDDVKCSI 470
Query: 199 CQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYT 238
CQ EY GD+ TLPC+H YH SC +WL + CPIC T
Sbjct: 471 CQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKT 510
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 132 NSSDYQVIWQD-NIDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRK- 189
N+ +Y QD +D ++M+YEELL L + +GT GL+ E + L + L +
Sbjct: 359 NAVNYVDHHQDMRLDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEG 418
Query: 190 KSRD---ERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFADKSK 246
S D + C ICQ YK DK TL C H YHA C +WL I CPIC +E + K
Sbjct: 419 PSTDLETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSEALVIEKK 478
Query: 247 PK 248
K
Sbjct: 479 KK 480
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 132 NSSDYQVIWQD-NIDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRK- 189
N+ +Y QD +D ++M+YEELL L + +GT GL+ E + L + L +
Sbjct: 359 NAVNYVDHHQDMRLDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEG 418
Query: 190 KSRD---ERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFADKSK 246
S D + C ICQ YK DK TL C H YHA C +WL I CPIC +E + K
Sbjct: 419 PSTDLETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSEALVIEKK 478
Query: 247 PK 248
K
Sbjct: 479 KK 480
>AT4G34040.1 | Symbols: | RING/U-box superfamily protein |
chr4:16304638-16307503 REVERSE LENGTH=666
Length = 666
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRD-ERCVICQME 202
+D DNM+YEELL LGE +G S GL+ E++ L + ++K +D E C +CQ E
Sbjct: 567 LDVDNMSYEELLALGERIGDVSTGLS-EEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEE 625
Query: 203 YKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFA 242
Y GD TL C H +H +C +WL + CPIC T +
Sbjct: 626 YAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICKTVALS 665
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYK----CGFFLRKKSRDERCVIC 199
+D DNM+YEELL LGE +G S GL+ E++ L + ++K + E C IC
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLS-EEVILKAMKQHKHTSSSPSSVELHQNIEPCCIC 659
Query: 200 QMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVF 241
Q EY GD TL C H +H C +W+ I CPIC TE
Sbjct: 660 QEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYK----CGFFLRKKSRDERCVIC 199
+D DNM+YEELL LGE +G S GL+ E++ L + ++K + E C IC
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLS-EEVILKAMKQHKHTSSSPSSVELHQNIEPCCIC 659
Query: 200 QMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVF 241
Q EY GD TL C H +H C +W+ I CPIC TE
Sbjct: 660 QEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYK----CGFFLRKKSRDERCVIC 199
+D DNM+YEELL LGE +G S GL+ E++ L + ++K + E C IC
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLS-EEVILKAMKQHKHTSSSPSSVELHQNIEPCCIC 659
Query: 200 QMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVF 241
Q EY GD TL C H +H C +W+ I CPIC TE
Sbjct: 660 QEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQIS-LLPVSKYKC-----GFFLRKKS---RDE 194
+D DNM+YEELL L E +GT S LT E IS L S Y+ G + S D
Sbjct: 387 LDIDNMSYEELLALEERIGTVSTALTEEAISKCLKTSIYQMKPLSYGSITKSPSDNKEDA 446
Query: 195 RCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPIC 236
+C ICQ EY GD+ L C+H YH C WL I CPIC
Sbjct: 447 KCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPIC 488
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSR--DERCVICQM 201
++ DNMTYE+LLELGE +G + GLT +QI C R+ + D +C+ICQ
Sbjct: 269 LNVDNMTYEQLLELGERIGHVNTGLTEKQIKSCLRKVKPC----RQDTTVADRKCIICQD 324
Query: 202 EYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVF 241
EY+ D+ L C H +H C N+WL +CP+C T +
Sbjct: 325 EYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCKTMAY 364
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDER-------- 195
+D + M+YEELL L E +GT + GL E + ++ G K+S R
Sbjct: 382 LDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSSPRTKDLETEP 441
Query: 196 CVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFADKSK 246
C ICQ +K +K TL C H YHA C +WL + CPIC +E + +
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSEALVMEKR 492
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDER-------- 195
+D + M+YEELL L E +GT + GL E + ++ G K+S R
Sbjct: 382 LDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSSPRTKDLETEP 441
Query: 196 CVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFADKSK 246
C ICQ +K +K TL C H YHA C +WL + CPIC +E + +
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSEALVMEKR 492
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQIS-LLPVSKYKCGFFLRKKSRD-ERCVICQM 201
+D DNM+YEELL L E +G G+ E IS L KYK K +D E C +CQ
Sbjct: 586 LDVDNMSYEELLALEERIGDVCTGVNEETISNRLKQRKYKSNT---KSPQDAEPCCVCQE 642
Query: 202 EYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYT 238
EY G+ TL C H +H+ C WL CPIC T
Sbjct: 643 EYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPICKT 679
>AT2G15530.4 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777899 FORWARD LENGTH=780
Length = 780
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYK----CGFFLRKKSRDERCVIC 199
+D DNM+YEELL LGE +G S GL+ E++ L + ++K + E C IC
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLS-EEVILKAMKQHKHTSSSPSSVELHQNIEPCCIC 659
Query: 200 QMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPI 235
Q EY GD TL C H +H C +W+ I CPI
Sbjct: 660 QEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPI 695
>AT2G37150.2 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEY 203
+D DNM+YEELL+LGE +G+ + GL+ IS ++ + ++ R +C IC EY
Sbjct: 442 LDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTEEQR--KCAICLEEY 499
Query: 204 KRGDKRITLP-CKHVYHASCGNRWLSINKACPICYTEVFADKSK 246
K ++ + C H YH C +WLS+ +CPIC + D SK
Sbjct: 500 KEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPALPDASK 543
>AT2G37150.1 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEY 203
+D DNM+YEELL+LGE +G+ + GL+ IS ++ + ++ R +C IC EY
Sbjct: 442 LDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTEEQR--KCAICLEEY 499
Query: 204 KRGDKRITLP-CKHVYHASCGNRWLSINKACPICYTEVFADKSK 246
K ++ + C H YH C +WLS+ +CPIC + D SK
Sbjct: 500 KEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPALPDASK 543
>AT2G37150.3 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15607600 REVERSE LENGTH=599
Length = 599
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEY 203
+D DNM+YEELL+LGE +G+ + GL+ IS ++ + ++ R +C IC EY
Sbjct: 495 LDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTEEQR--KCAICLEEY 552
Query: 204 KRGDKRITLP-CKHVYHASCGNRWLSINKACPICYTEVFADKSK 246
K ++ + C H YH C +WLS+ +CPIC + D SK
Sbjct: 553 KEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPALPDASK 596
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSR----DERCVIC 199
+D D+M+YE+LLELG+ +G + GL +I ++C ++ D +C IC
Sbjct: 271 LDVDSMSYEQLLELGDRIGYVNTGLKESEI-------HRCLGKIKPSVSHTLVDRKCSIC 323
Query: 200 QMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFA 242
Q EY+R D+ L C H +H C +WLS ACP+C +
Sbjct: 324 QDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCKKAAYG 366
>AT1G45180.1 | Symbols: | RING/U-box superfamily protein |
chr1:17099335-17101683 FORWARD LENGTH=645
Length = 645
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQIS-LLPVSKYKCGFFLRKKSRDERCVICQME 202
+D DNMTYEELL L E +G GL E IS L KYK R E C +CQ E
Sbjct: 541 LDVDNMTYEELLSLEERIGDVCTGLNEETISNRLKQQKYKSS--TRSSQEVEPCCVCQEE 598
Query: 203 YKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFADKSKPK 248
YK ++ L C H +H+ C WL CPIC T +KP+
Sbjct: 599 YKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPICKTTGLNTANKPQ 644
>AT5G07225.1 | Symbols: | RING/U-box superfamily protein |
chr5:2268642-2270227 REVERSE LENGTH=234
Length = 234
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 167 GLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLPCKHVYHASCGNRW 226
GLT QIS LP K+K D+ C+IC +Y RGDK LPC H YH C + W
Sbjct: 165 GLTEGQISQLPTIKFKPSL------EDKMCMICHSDYVRGDKLTILPCTHKYHKDCISHW 218
Query: 227 LSINKACPICYTEVFA 242
L +K C +C EV
Sbjct: 219 LQNSKLCCVCQREVIV 234
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 163 TQSRGLTPEQISLLPVSKYKC--------------GFFL--RKKSR-----DERCVICQM 201
+Q+RG T E I+ LPV ++K GF L +K R D C IC
Sbjct: 301 SQTRGATAEAINALPVYRFKSKSRNDLEFSEEGEGGFLLLGSQKKRLISGEDASCCICLT 360
Query: 202 EYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEV 240
Y ++ LPC HV+H C ++WL IN CP+C EV
Sbjct: 361 RYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEV 399
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 147 DNMTYEELLELGEAVGTQSRGLTPEQISL-LPVSKYKCGFFLRKKSRDE--RCVICQMEY 203
D TYEELL + + G + GL+ E I L KY+ K+S DE RCVICQ +
Sbjct: 181 DIFTYEELLSITDETGDERTGLSEEVIDENLIRRKYE------KRSDDETKRCVICQQKL 234
Query: 204 KRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEV 240
K ++ L C H +H C WL + CP+C EV
Sbjct: 235 KDNEEVSKLGCGHDFHFGCIKNWLMVTNKCPLCNREV 271
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 24/102 (23%)
Query: 163 TQSRGLTPEQISLLPVSKYKC----------------GFFLRKKSRDER--------CVI 198
TQ RG TPE I+ LP K+K G + + +ER C I
Sbjct: 306 TQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVAAGTDNERAISGEDAVCCI 365
Query: 199 CQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEV 240
C +Y ++ LPC H +H C ++WL IN +CP+C +EV
Sbjct: 366 CLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEV 407
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 166 RGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLP-CKHVYHASCGN 224
RGL + + LPV +Y K R+E CVIC +++ G+ +P C HV+H C +
Sbjct: 114 RGLDSQAVRSLPVYRYTKA----AKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVD 169
Query: 225 RWLSINKACPICYT-EVFADK 244
WLS CP+C + ++F+DK
Sbjct: 170 TWLSSYVTCPLCRSNQLFSDK 190
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 158 GEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLP-CKH 216
G ++ T GL+ E +LP+ +K F + D +C +C +Y+ DK +P CKH
Sbjct: 66 GNSLSTIELGLSKELREMLPIVVFKESFTVM----DSQCSVCLGDYQPNDKLQQIPVCKH 121
Query: 217 VYHASCGNRWLSINKACPICYTEVFADKSK 246
+H C + WL+ + CP+C + +S+
Sbjct: 122 TFHMDCIDLWLTSHTTCPLCRLALIPSRSR 151
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 161 VGTQSRGLTPEQISLLPVSKYKCGFFLRKKSR---DERCVICQMEYKRGDKRITLPCKHV 217
VG+ +G + +QIS LP KYK S+ D C IC +YK ++ LPC H
Sbjct: 251 VGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHR 310
Query: 218 YHASCGNRWLSINKACPICYTEV 240
+H C ++WL I CP+C ++
Sbjct: 311 FHLKCVDQWLRIISCCPLCKQDL 333
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 161 VGTQSRGLTPEQISLLPVSKYKCGFFLRKKSR---DERCVICQMEYKRGDKRITLPCKHV 217
VG+ +G + +QIS LP KYK S+ D C IC +YK ++ LPC H
Sbjct: 251 VGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHR 310
Query: 218 YHASCGNRWLSINKACPICYTEV 240
+H C ++WL I CP+C ++
Sbjct: 311 FHLKCVDQWLRIISCCPLCKQDL 333
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 149 MTYEELLELGEAVGTQSRGLTPEQ---------------ISLLPVSKYKCGFFLRKKSRD 193
+ E L E+ + + QS L+ +Q + LLP+ Y + +S D
Sbjct: 432 LLAEALFEVLDEIHQQSVVLSSQQPSVSSIGSVPAPNDVVDLLPIKLYT-----KSQSED 486
Query: 194 -ERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLS-INKACPICYTEV 240
+C IC +EY+ D TLPC H +H +C ++WL I++ CP+C ++
Sbjct: 487 PSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHRVCPLCRGDI 535
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 152 EELLELGEAVGTQSRGLTP---EQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDK 208
EEL E A GT RG P I LP K +S D C +C+ E++ G +
Sbjct: 147 EELFEQLSA-GTTRRGPPPAPRSAIDALPTIKIAQRHL---RSSDSNCPVCKDEFELGSE 202
Query: 209 RITLPCKHVYHASCGNRWLSINKACPICYTEV 240
+PC H+YH+ C WL + +CP+C E+
Sbjct: 203 AKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 152 EELLELGEAVGTQSRGLTP---EQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDK 208
EEL E A GT RG P I LP K +S D C +C+ E++ G +
Sbjct: 147 EELFEQLSA-GTTRRGPPPAPRSAIDALPTIKIAQRHL---RSSDSNCPVCKDEFELGSE 202
Query: 209 RITLPCKHVYHASCGNRWLSINKACPICYTEV 240
+PC H+YH+ C WL + +CP+C E+
Sbjct: 203 AKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 152 EELLELGEAVGTQSRGLTP---EQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDK 208
EEL E A GT RG P I LP K +S D C +C+ E++ G +
Sbjct: 147 EELFEQLSA-GTTRRGPPPAPRSAIDALPTIKIAQRHL---RSSDSNCPVCKDEFELGSE 202
Query: 209 RITLPCKHVYHASCGNRWLSINKACPICYTEV 240
+PC H+YH+ C WL + +CP+C E+
Sbjct: 203 AKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
Query: 97 LTSNEQTAAGSTEWGEGGNPDTQDTSIECPRRHHSNSSDYQVIWQDNIDPDNMTYEELLE 156
+ N +A S GE N T++T E + Q+ I+ +M ++L+
Sbjct: 145 VQQNLMSAFASIVGGESSNGPTENTIGETAN-----------LMQELINGLDMIIPDILD 193
Query: 157 LGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLPCKH 216
G ++ + E + LPV + L+K + C IC+ GDK LPCKH
Sbjct: 194 DGGP--PRAPPASKEVVEKLPVIIFT-EELLKKFGAEAECCICKENLVIGDKMQELPCKH 250
Query: 217 VYHASCGNRWLSINKACPICYTEVFADKSK 246
+H C WL + +CPIC E+ D K
Sbjct: 251 TFHPPCLKPWLDEHNSCPICRHELPTDDQK 280
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 166 RGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLP-CKHVYHASCGN 224
RGL P I+ LP + G + C +C K DK LP CKH++H C +
Sbjct: 80 RGLNPTVIASLPT--FTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVD 137
Query: 225 RWLSINKACPICYTEV 240
WL+ CP+C TEV
Sbjct: 138 TWLTTCSTCPVCRTEV 153
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 173 ISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKA 232
I LP K KS +C +C E++ G +PCKHV+H C WL ++ +
Sbjct: 196 IDALPTVKVTKDML---KSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNS 252
Query: 233 CPICYTEVFAD 243
CP+C E+ D
Sbjct: 253 CPVCRFELPTD 263
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 173 ISLLPVSKYKCGFFLRK-----KSRDERCVICQMEYKRGDKRITLPCKHVYHASCGNRWL 227
ISL P +K RK S ERC IC E+ G K +TLPC H + C W
Sbjct: 147 ISLRPANKLVVNSLARKIYKKTTSSTERCTICLEEFNDGTKVMTLPCGHEFDDECVLTWF 206
Query: 228 SINKACPIC 236
N CP+C
Sbjct: 207 ETNHDCPLC 215
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 151 YEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRI 210
YE LL L E + G + +I+ LP S + F E CVIC K GD
Sbjct: 551 YELLLALDEN-NHRHGGASANRINNLPESTVQTDNF------QETCVICLETPKIGDTIR 603
Query: 211 TLPCKHVYHASCGNRWLSINKACPICYTEV 240
LPC H +H C + WL +K+CP+C + V
Sbjct: 604 HLPCLHKFHKDCIDPWLGRSKSCPVCKSSV 633
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 196 CVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPIC 236
CVIC E+ + D LPCKH YH C +WL I+ +CP C
Sbjct: 481 CVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQC 521
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 164 QSRGLTPEQISLLPVSKYKC------GFF-----LRKKSRDERCVICQMEYKRGDKRITL 212
+SRGL I +P+ K+K G F ++ R + C +C E++ +K +
Sbjct: 95 RSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRII 154
Query: 213 P-CKHVYHASCGNRWLSINKACPICYTEVFADKSKP 247
P C H++H C + WL N CP+C T V D S P
Sbjct: 155 PNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFP 190
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 154 LLELGEAVGTQSRGLTPEQISLLPVSKYK--------CGFFLRKKSRDERCVICQMEYKR 205
LL +G+ R + +QIS LP K+K + D C IC +YK
Sbjct: 247 LLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDSDSATVTDDPECCICLAKYKD 306
Query: 206 GDKRITLPCKHVYHASCGNRWLSINKACPICYTEV 240
++ LPC H +H+ C ++WL I CP+C ++
Sbjct: 307 KEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 154 LLELGEAVGTQSRGLTPEQISLLPVSKYK--------CGFFLRKKSRDERCVICQMEYKR 205
LL +G+ R + +QIS LP K+K + D C IC +YK
Sbjct: 247 LLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDSDSATVTDDPECCICLAKYKD 306
Query: 206 GDKRITLPCKHVYHASCGNRWLSINKACPICYTEV 240
++ LPC H +H+ C ++WL I CP+C ++
Sbjct: 307 KEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 166 RGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDK-RITLPCKHVYHASCGN 224
RGL E I P Y + + CV+C E+K + R+ PC HV+HA C +
Sbjct: 55 RGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVD 114
Query: 225 RWLSINKACPICYTEV 240
WLS + CPIC +V
Sbjct: 115 IWLSHSSTCPICRAKV 130
>AT5G52150.1 | Symbols: | RING/U-box superfamily protein |
chr5:21189988-21191303 REVERSE LENGTH=200
Length = 200
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 167 GLTPEQISLLPVSKY--KCGFFLRKKSRDER--CVICQMEYKRGDKRITLPCKHVYHASC 222
GL IS LP KY K ++ +K +R C IC +Y++GDK LPCKH +H C
Sbjct: 131 GLPENIISGLPTQKYSRKTWWWSKKTFVPDRKECSICIADYEKGDKITILPCKHAFHKDC 190
Query: 223 GNRWLSINKA 232
WL NK
Sbjct: 191 IANWLKENKV 200
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 195 RCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEV 240
+C +C E+ G LPCKH+YH C WL +N +CPIC ++
Sbjct: 223 QCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDL 268
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 196 CVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFADKSK 246
C +C+ E G+K + LPC H YH+ C WL + CP+C E+ D ++
Sbjct: 309 CAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDDAE 359
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 143 NIDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQME 202
+ID D + L++ + +GLT + I+ L + KS C IC
Sbjct: 153 SIDGDPIFQLAGLQVTYECNKKPQGLTQDAINCLHRQTFSSA---EVKSEMRDCSICLES 209
Query: 203 YKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEV 240
+ +GD I+LPC H +H+SC N WL CP C +
Sbjct: 210 FTKGDMLISLPCTHSFHSSCLNPWLRACGDCPCCRRAI 247
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 167 GLTPEQISLLPVSKYKCGFFLRKKSRDER-CVICQMEYKRGDKRITLPCKHVYHASCGNR 225
G P ++ L S+ + + +++ R+++ C IC +K+G+ + LPC H +H+ C
Sbjct: 120 GDLPTEVVGLKKSRGRLMEWFKRRVREQQDCAICLDRFKKGETLVHLPCAHKFHSICLLP 179
Query: 226 WLSINKACPICYTEVF 241
WL N CP C T+++
Sbjct: 180 WLDTNVYCPYCRTDIW 195
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 152 EELLELGEAVGTQSRGLTP---EQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDK 208
EEL+E + GT RG P I LP K KS D C +C+ E++ +
Sbjct: 143 EELIEQLSS-GTHHRGPPPAPKSSIDALPTIKITQKHL---KSSDSHCPVCKDEFELKSE 198
Query: 209 RITLPCKHVYHASCGNRWLSINKACPICYTEV 240
+PC H+YH+ C WL + +CP+C E+
Sbjct: 199 AKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 152 EELLELGEAVGTQSRGLTP---EQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDK 208
EEL+E + GT RG P I LP K KS D C +C+ E++ +
Sbjct: 143 EELIEQLSS-GTHHRGPPPAPKSSIDALPTIKITQKHL---KSSDSHCPVCKDEFELKSE 198
Query: 209 RITLPCKHVYHASCGNRWLSINKACPICYTEV 240
+PC H+YH+ C WL + +CP+C E+
Sbjct: 199 AKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 152 EELLELGEAVGTQSRGLTP---EQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDK 208
EEL+E + GT RG P I LP K KS D C +C+ E++ +
Sbjct: 143 EELIEQLSS-GTHHRGPPPAPKSSIDALPTIKITQKHL---KSSDSHCPVCKDEFELKSE 198
Query: 209 RITLPCKHVYHASCGNRWLSINKACPICYTEV 240
+PC H+YH+ C WL + +CP+C E+
Sbjct: 199 AKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 149 MTYEELLELGEAVGTQSRGLTPEQ---------------ISLLPVSKYKCGFFLRKKSRD 193
+ E L E+ + + QS L+ +Q + LLP+ Y + +S D
Sbjct: 432 LLAEALFEVLDEIHQQSVVLSSQQPSVSSIGSVPAPNDVVDLLPIKLYT-----KSQSED 486
Query: 194 -ERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSI--NKACPICYTEV 240
+C IC +EY+ D TLPC H +H +C ++WL ++ CP+C ++
Sbjct: 487 PSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHSRVCPLCRGDI 536
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 147 DNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRG 206
+ +++EEL A+ + RG P ++ + S K + D C +CQ +++ G
Sbjct: 74 EQLSFEELFNRLPALQDR-RGPPPASLAAI-NSLQKIKIRQKHLGLDPYCPVCQDQFEIG 131
Query: 207 DKRITLPCKHVYHASCGNRWLSINKACPICYTEVFADKSKPK 248
+PCKH+YH+ C WL CP+C E+ D++ +
Sbjct: 132 SDARKMPCKHIYHSECILPWLVQRNTCPVCRKELPQDRNNSR 173
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 159 EAVGTQSRGLTPEQIS---LLPVSKYKCGFFLRKKSRDERCV-ICQMEYKRGDKRITLP- 213
+ V + GLT E I LP + + + L+K+S C IC +YK+ D LP
Sbjct: 88 DTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPD 147
Query: 214 CKHVYHASCGNRWLSINKACPICYT 238
C H++H +C + WL ++ CP+C T
Sbjct: 148 CNHLFHDNCVDPWLRLHPTCPVCRT 172
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 191 SRDERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVF 241
S D C IC Y+ G + LPC+H +H+ C ++WL IN CP+C +
Sbjct: 318 SEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCKFNIL 368
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 151 YEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDK-R 209
Y +L+ + A ++ GL P I PV Y KK+ C IC E+ D R
Sbjct: 63 YGDLIHV--ATPPENTGLDPFIIRSFPVFHYSSA---TKKNHGTECAICLSEFSDEDTVR 117
Query: 210 ITLPCKHVYHASCGNRWLSINKACPICYTEV 240
+ C+H +H++C + W ++K CP+C E+
Sbjct: 118 LITVCRHPFHSNCIDLWFELHKTCPVCRCEL 148
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 161 VGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLP-CKHVYH 219
+ T GL+ + +LPV YK F ++ D +C +C +Y+ +K +P C H +H
Sbjct: 80 LSTAELGLSKDIREMLPVVIYKESFIVK----DSQCSVCLGDYQAEEKLQQMPSCGHTFH 135
Query: 220 ASCGNRWLSINKACPIC 236
C + WL+ + CP+C
Sbjct: 136 MECIDLWLTSHTTCPLC 152
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 193 DERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVF 241
D C IC Y+ G + ++LPC H +H++C +WL +N CP+C +
Sbjct: 289 DADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNIL 337
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 145 DPDNMTYEELLELG--EAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQME 202
D D M + G E + ++RG+ E + P+ + D C IC E
Sbjct: 292 DIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIER-------SLSPEDAECCICLCE 344
Query: 203 YKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFAD 243
Y+ G + LPC H +H +C ++WL IN CP+C + +
Sbjct: 345 YEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNILKN 385
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 165 SRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDK-RITLPCKHVYHASCG 223
+RGL E I P Y +R C +C E++ + R+ PC HV+HA C
Sbjct: 104 ARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCV 163
Query: 224 NRWLSINKACPICYTEVFADK 244
+ WLS + CP+C ++ ++
Sbjct: 164 DVWLSEHSTCPLCRADLVLNQ 184
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 192 RDERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEV 240
+++ C IC+ E++ G++ L C H+YH+SC WL+I+ CPIC EV
Sbjct: 134 KEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEV 182
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 147 DNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRG 206
D+ TY+ +L + GL I LPV YK ++ C +C E+
Sbjct: 100 DSDTYQR--QLQQLFHLHDSGLDQALIDALPVFLYK---EIKGTKEPFDCAVCLCEFSED 154
Query: 207 DKRITLP-CKHVYHASCGNRWLSINKACPICYTEVFA 242
DK LP C H +H C + WL N CP+C +F+
Sbjct: 155 DKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFS 191
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 159 EAVGTQSRG-------------LTPEQISLLPVSKYKCGFFLRKKSRDE--RCVICQMEY 203
EA G + RG LTP Q + + F K D+ C+IC E+
Sbjct: 183 EAAGQEMRGISQDAATYHPGLYLTPAQTEAVEALIQELPKFRLKAVPDDCGECLICLEEF 242
Query: 204 KRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFAD 243
G + LPC H +H C ++WL +N CP C VF D
Sbjct: 243 HIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPD 282
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 167 GLTPEQISLLPVSKYKCGFFLRKKSRD-ERCVICQMEYKRGDKRITLP-CKHVYHASCGN 224
GLT ++S LP+ FF + +D C IC E +GDK LP C H +H C +
Sbjct: 102 GLTSFELSSLPIV-----FFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECID 156
Query: 225 RWLSINKACPICYTEVFA 242
W + CPIC V
Sbjct: 157 MWFQSHSTCPICRNTVLG 174
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 196 CVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFAD 243
C +C ++ G + +PCKH++H C WLSI +CP+C E+ +D
Sbjct: 215 CAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSD 262
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 166 RGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLP-CKHVYHASCGN 224
RGL I+ LP + G ++ C +C + D LP CKHV+H SC +
Sbjct: 74 RGLDSLVIASLPT--FVVG--IKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVD 129
Query: 225 RWLSINKACPICYTEVFADKSKPK 248
WL+ CP+C TE A+ S P+
Sbjct: 130 TWLTTQSTCPVCRTE--AEPSHPR 151
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 193 DERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPIC 236
D C IC Y+ G + LPC H +H SC ++WL IN CP+C
Sbjct: 350 DAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLC 393
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 196 CVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFAD 243
CVIC E+K + +PCKH +H C +WL + +CP+C E+ D
Sbjct: 113 CVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 193 DERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPIC 236
D C IC Y+ G + LPC H +H SC ++WL IN CP+C
Sbjct: 279 DAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLC 322
>AT5G54990.1 | Symbols: | RING/U-box superfamily protein |
chr5:22317505-22318185 FORWARD LENGTH=226
Length = 226
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 196 CVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTE 239
C IC E G R+ LPC HV+H C WL N +CPIC T+
Sbjct: 174 CPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICRTK 217
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 196 CVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEV 240
C IC E+ +GD +PCKH +H+ C WL + CP+C E+
Sbjct: 109 CAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHATCPMCRYEM 153
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 167 GLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGD--KRITLPCKHVYHASCGN 224
GL P I P+ + LR+ C IC +E++ R+ C HV+H C +
Sbjct: 85 GLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECID 144
Query: 225 RWLSINKACPIC 236
+WL NK CP+C
Sbjct: 145 QWLESNKTCPVC 156
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 173 ISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLP-CKHVYHASCGNRWLSINK 231
I LP+ YK LR D C +C E+ D+ LP C H +H C + WL N
Sbjct: 101 IDALPLLHYKTMIGLRHDLSD--CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNS 158
Query: 232 ACPIC 236
CP+C
Sbjct: 159 TCPLC 163
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 158 GEAVGTQ--SRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDK-RITLPC 214
GE T+ SRGL + I+ P Y L+ C IC E++ + R+ PC
Sbjct: 88 GEVAFTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPC 147
Query: 215 KHVYHASCGNRWLSINKACPICYTEV 240
H +HASC + WLS CP+C +
Sbjct: 148 SHAFHASCIDVWLSSRSTCPVCRASL 173
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 196 CVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFAD 243
C +C+ E G + LPC+H YH+ C WL I CP+C E+ +D
Sbjct: 372 CAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPSD 419
>AT1G36950.1 | Symbols: | RING/U-box superfamily protein |
chr1:14009673-14010822 REVERSE LENGTH=226
Length = 226
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 144 IDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEY 203
+D D+MTYE+LL+L ++G ++ + I + F + D+ C ICQ +
Sbjct: 31 MDTDHMTYEQLLQLCNSMGYENSSVKASNIDRCFRNTKPSEF---QSLADKICCICQDRF 87
Query: 204 KRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFADK 244
+R L C H +H + W+ K CP+C D+
Sbjct: 88 QRRAGVGKLNCGHNFHINSVKPWILTKKQCPVCQKTAHDDE 128
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 165 SRGLTPEQISLLPVSKYKCGFFLR----KKSRDERCVICQMEYKRGDKRITLP-CKHVYH 219
+RGL I +PV K+K + + + C +C E++ +K +P C HV+H
Sbjct: 99 NRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFH 158
Query: 220 ASCGNRWLSINKACPICYTEVFADKS 245
C + WL N CP+C T V + S
Sbjct: 159 IDCIDIWLQGNANCPLCRTSVSCEAS 184
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 196 CVICQMEYKRGDKRIT-LPCKHVYHASCGNRWLSINKACPICYTEVFAD 243
C IC +Y G + LPC H +H C N+WL +N CP+C + + D
Sbjct: 183 CAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIPKD 231
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 149 MTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDK 208
M E + L G+ ++G+ + + + PV Y L DE CVIC ++ G++
Sbjct: 90 MISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNL--PGLDEECVICLSDFVSGEQ 147
Query: 209 RITLP-CKHVYHASCGNRWLSINKACPIC 236
LP C H +H C ++WL + CP C
Sbjct: 148 LRLLPKCNHGFHVRCIDKWLQQHLTCPKC 176
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 196 CVICQMEYKRGDKRITLP-CKHVYHASCGNRWLSINKACPICYTEVFADKSKPK 248
CV+C E GDK LP C H +H C + WL N CPIC V +S+ +
Sbjct: 88 CVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQSRTR 141
>AT5G01980.1 | Symbols: | RING/U-box superfamily protein |
chr5:375542-377023 FORWARD LENGTH=493
Length = 493
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 147 DNMTYEELLELGEAVGTQSRGLTPEQISL---LPVSKYKCGFFLRKKSRDERCVICQMEY 203
D ++ELLE RG P +S LP ++ C IC+ +
Sbjct: 302 DERGFDELLEQLAESDNSRRGAPPASVSCVRNLPRVIIAEEHVMKGLV----CAICKELF 357
Query: 204 KRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFAD 243
++ LPC H+YHA C WLS +CP+C E+ D
Sbjct: 358 SLRNETTQLPCLHLYHAHCIVPWLSARNSCPLCRYELPTD 397
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 160 AVGTQSRGLTPEQISLLPVSKYKCGFF-LRKKSRDERCVICQMEYKRGDKRITLPCKHVY 218
V + G P S L V + + S E C+IC E+ G + +TLPC H +
Sbjct: 22 TVNAKIDGYNPTPASKLVVKSLARKIYKMTTSSTGEMCIICLEEFSEGRRVVTLPCGHDF 81
Query: 219 HASCGNRWLSINKACPIC 236
C +W N +CP+C
Sbjct: 82 DDECVLKWFETNHSCPLC 99
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 196 CVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFAD 243
C IC+ E +K LPCKH YH C WL I CP+C E+ D
Sbjct: 291 CAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHELPTD 338
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 193 DERCVICQMEYKRGDKRITLP-CKHVYHASCGNRWLSINKACPIC 236
D C IC EYK + +P CKH +H C + WL +N +CP+C
Sbjct: 135 DTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVC 179
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 163 TQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLPCKHVYHASC 222
+Q G+ + +P + C + C IC +Y GDK LPC H +H +C
Sbjct: 201 SQFNGMCRRTVKAMPSVTFTCAKI--DNTTGFSCAICLEDYIVGDKLRVLPCSHKFHVAC 258
Query: 223 GNRWL-SINKACPICYTEVFADKSKP 247
+ WL S CP+C + +P
Sbjct: 259 VDSWLISWRTFCPVCKRDARTTADEP 284
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 196 CVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKA-CPIC 236
C IC Y++GDK LPC H +H +C + WL K+ CP+C
Sbjct: 234 CCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVC 275
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 156 ELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLP-C 214
+L + G+ I LPV YK L+ D C +C E++ DK LP C
Sbjct: 88 QLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFD--CPVCLCEFETEDKLRLLPKC 145
Query: 215 KHVYHASCGNRWLSINKACPICYTEVFA 242
H +H C + WL + CP+C + + +
Sbjct: 146 SHAFHVECIDTWLLSHSTCPLCRSNLLS 173
>AT4G00305.1 | Symbols: | RING/U-box superfamily protein |
chr4:131550-131930 FORWARD LENGTH=126
Length = 126
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 150 TYEELLELGEAVGTQSRGLTP-EQI---SLLPVSKYKCGFFLRKKSRDERCVICQMEYKR 205
+ L++ G+ S G T ++I +LP +K++ + + E C ICQ E+
Sbjct: 23 SVRSFLDIRRLFGSASSGSTIIDKIPMDDMLPATKFE--DISSRVNPPESCRICQDEFDG 80
Query: 206 GDK-RITLPCKHVYHASCGNRWLSINK-ACPICYTEVFAD 243
GD+ R C HVYH +C +RW+ +K CP+C T + D
Sbjct: 81 GDEVRCLRNCVHVYHKTCIDRWIQDDKMTCPLCRTPIVPD 120
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 189 KKSRDERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFAD 243
K S +C IC ++ +G + +PCKH +H C WL ++ +CP+C E+ D
Sbjct: 234 KISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPD 288
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 189 KKSRDERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFAD 243
K S +C IC ++ +G + +PCKH +H C WL ++ +CP+C E+ D
Sbjct: 234 KISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPD 288
>AT3G13228.1 | Symbols: | RING/U-box superfamily protein |
chr3:4267075-4268052 FORWARD LENGTH=325
Length = 325
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 194 ERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEV 240
ERC IC E+ G + LPC H + C +W N CP+C E+
Sbjct: 273 ERCTICLEEFNAGGILVALPCGHDFDDECAVKWFETNHFCPLCRYEL 319
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 190 KSRDERCVICQMEYKRGDKRITLP-CKHVYHASCGNRWLSINKACPIC 236
K D C IC EY+ + T+P C+H +HA C + WL +N CP+C
Sbjct: 324 KVDDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVC 371
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 141 QDNIDPDNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQ 200
Q + + T+EEL + + G S+GLT + + +P K L + C +C
Sbjct: 138 QSQMGAVDSTFEELSSIFDTGG--SKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCL 195
Query: 201 MEYKRGDKRITLP-CKHVYHASCGNRWLSINKACPICYTEV 240
+++ G+ +LP C H++H C + WL + +CP+C ++
Sbjct: 196 QDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 187 LRKKSRDERCVICQMEYKRGDK-RITLPCKHVYHASCGNRWLSINKACPICYTEVFADKS 245
L + C IC E+++G+ ++ C+H +H C ++WLS +CP C T +F+ S
Sbjct: 98 LELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSIFSQHS 157
Query: 246 K 246
+
Sbjct: 158 E 158
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 191 SRDERCVICQMEYKRGDKRITLP-CKHVYHASCGNRWLSINKACPICYTEVFADKSK 246
+RD C +C E++ ++ + +P CKH++H C + WL + CP+C + V +K
Sbjct: 100 TRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSVSISSTK 156
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 147 DNMTYEELLELGEAVGTQSRGLTPEQISLLPVSKYKC-----GFFL-------------- 187
D++ YE L L ++ + ++ E+I+ LPV KYK G L
Sbjct: 137 DDLDYETLRAL-DSDNVSTTSMSEEEINALPVHKYKVLDPENGCSLAKQASTSSSAEKML 195
Query: 188 ------RKKSRDE-RCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPIC 236
+K + DE C +C + G+ TLPC H +HA C + WL CP+C
Sbjct: 196 DSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVC 251
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 195 RCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFADKSK 246
+C +C +++ G + +PC H +H+ C WL ++ +CP+C ++ AD++K
Sbjct: 222 QCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAK 273
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 167 GLTPEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLP-CKHVYHASCGNR 225
GL + + +PV Y G K + C+IC +++ G+K LP C H +H C +
Sbjct: 88 GLKKQALKQIPVGLYGSGIIDMKATE---CLICLGDFEDGEKVRVLPKCNHGFHVRCIDT 144
Query: 226 WLSINKACPICYTEVFADKSKP 247
WL +CP C + ++ P
Sbjct: 145 WLLSRSSCPTCRQSLLLEQPSP 166