Miyakogusa Predicted Gene

Lj3g3v3237920.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3237920.3 Non Chatacterized Hit- tr|I1LQJ5|I1LQJ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16810
PE,82.31,0,GTP1OBG,GTP binding domain; P-loop containing nucleoside
triphosphate hydrolases,NULL; no descriptio,CUFF.45517.3
         (647 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G12080.1 | Symbols: emb2738 | GTP-binding family protein | ch...   803   0.0  
AT3G12080.2 | Symbols: emb2738 | GTP-binding family protein | ch...   705   0.0  
AT5G39960.1 | Symbols:  | GTP binding;GTP binding | chr5:1599419...   199   6e-51
AT1G78010.1 | Symbols:  | tRNA modification GTPase, putative | c...    87   3e-17
AT5G66470.1 | Symbols:  | RNA binding;GTP binding | chr5:2654198...    66   8e-11
AT1G52980.1 | Symbols:  | GTP-binding family protein | chr1:1973...    54   3e-07

>AT3G12080.1 | Symbols: emb2738 | GTP-binding family protein |
           chr3:3847851-3851980 FORWARD LENGTH=663
          Length = 663

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/547 (72%), Positives = 462/547 (84%), Gaps = 5/547 (0%)

Query: 83  LEQEAKDAVLEYSSSLDHVLTIEDE-IDLKETAQTHXXXXXXXXXIIPDRLLPRVAIVGR 141
           LE+EA+D V +Y+++L   L IEDE I+ KET +           I P+ LL RVAIVGR
Sbjct: 108 LEKEARDIVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNTQQI-PEHLLQRVAIVGR 166

Query: 142 PNVGKSALFNRFVGGNKAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVLTVSKSQSAV 201
           PNVGKSALFNR VG N+AIVVDEPGVTRDRLYGRSYWG+ EF+VVDTGGV+TVSKS S V
Sbjct: 167 PNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGV 226

Query: 202 MEELAITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVIVFVVDGQAGLTAADE 261
           MEEL ++TTIGM+GIPL SREAA+ARMPSMIE+QATAA++ES+VI+FVVDGQAG + AD 
Sbjct: 227 MEELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQAGPSGADV 286

Query: 262 EIADWLRKYYSKKYIILAVNKCESPRKRIMQASEFWSLGFEPIPISAISGTGTGELLDLV 321
           EIADWLRKYYS KYIILAVNKCESPRK +MQASEFWSLGF PIPISA+SGTGTGELLDLV
Sbjct: 287 EIADWLRKYYSHKYIILAVNKCESPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLV 346

Query: 322 CSGLKKVEEPKNLDEED---YVPSISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDA 378
           CSGL K+E  +N++EE+   Y+P+I+I+GRPNVGKSSILNALV EDRTIVSP+SGTTRDA
Sbjct: 347 CSGLIKLEIMENIEEEEEENYIPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDA 406

Query: 379 IDTEFTGVDGQKFRLIDTAGIRRRAAVVSAGSTTEALSGNRAFRAIRRSDIVALVIEALS 438
           ID EFTG DG+KFRLIDTAGIR++++V S+GSTTEA+S NRAFRAIRRSD+VALVIEA++
Sbjct: 407 IDAEFTGPDGEKFRLIDTAGIRKKSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMA 466

Query: 439 CITEQDFKIAERIEKEGKGCVIVVNKWDTIPNKNQQTATYYEQDVREKLRGLDWAPIVYS 498
           CITEQD KIAERIE+EGKGC++VVNKWDTIPNKNQ+TA +YE DVREKLR L WAPIVYS
Sbjct: 467 CITEQDLKIAERIEREGKGCLVVVNKWDTIPNKNQETAAHYEDDVREKLRSLKWAPIVYS 526

Query: 499 TAIAGQSVDKIIDAASEVEKERSRRLGTSILNQVVREALAFXXXXXXXXXXXXXVYYCTQ 558
           TAI G SVD I+ AA+ V+KERSRRL T+ILNQV+REA+AF             VYYCTQ
Sbjct: 527 TAITGHSVDNIVVAAATVQKERSRRLSTAILNQVIREAVAFKSPPRTRGGKRGRVYYCTQ 586

Query: 559 AAIRPPTFVFFVNDSKLFPETYRRYMEKQLRMDAGFSGTPIRLLWRSRRKMGRDEDKAAT 618
           AAIRPPTFVFFVND+KLF +TYRRYMEKQLR DAGF+GTPIRLLWRSR++  ++     T
Sbjct: 587 AAIRPPTFVFFVNDAKLFSDTYRRYMEKQLRTDAGFAGTPIRLLWRSRKRSDKNGGGGGT 646

Query: 619 RTQENLT 625
                LT
Sbjct: 647 MRMAGLT 653


>AT3G12080.2 | Symbols: emb2738 | GTP-binding family protein |
           chr3:3847851-3851677 FORWARD LENGTH=587
          Length = 587

 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/480 (73%), Positives = 407/480 (84%), Gaps = 5/480 (1%)

Query: 83  LEQEAKDAVLEYSSSLDHVLTIEDE-IDLKETAQTHXXXXXXXXXIIPDRLLPRVAIVGR 141
           LE+EA+D V +Y+++L   L IEDE I+ KET +           I P+ LL RVAIVGR
Sbjct: 108 LEKEARDIVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNTQQI-PEHLLQRVAIVGR 166

Query: 142 PNVGKSALFNRFVGGNKAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVLTVSKSQSAV 201
           PNVGKSALFNR VG N+AIVVDEPGVTRDRLYGRSYWG+ EF+VVDTGGV+TVSKS S V
Sbjct: 167 PNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGV 226

Query: 202 MEELAITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVIVFVVDGQAGLTAADE 261
           MEEL ++TTIGM+GIPL SREAA+ARMPSMIE+QATAA++ES+VI+FVVDGQAG + AD 
Sbjct: 227 MEELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQAGPSGADV 286

Query: 262 EIADWLRKYYSKKYIILAVNKCESPRKRIMQASEFWSLGFEPIPISAISGTGTGELLDLV 321
           EIADWLRKYYS KYIILAVNKCESPRK +MQASEFWSLGF PIPISA+SGTGTGELLDLV
Sbjct: 287 EIADWLRKYYSHKYIILAVNKCESPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLV 346

Query: 322 CSGLKKV---EEPKNLDEEDYVPSISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDA 378
           CSGL K+   E  +  +EE+Y+P+I+I+GRPNVGKSSILNALV EDRTIVSP+SGTTRDA
Sbjct: 347 CSGLIKLEIMENIEEEEEENYIPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDA 406

Query: 379 IDTEFTGVDGQKFRLIDTAGIRRRAAVVSAGSTTEALSGNRAFRAIRRSDIVALVIEALS 438
           ID EFTG DG+KFRLIDTAGIR++++V S+GSTTEA+S NRAFRAIRRSD+VALVIEA++
Sbjct: 407 IDAEFTGPDGEKFRLIDTAGIRKKSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMA 466

Query: 439 CITEQDFKIAERIEKEGKGCVIVVNKWDTIPNKNQQTATYYEQDVREKLRGLDWAPIVYS 498
           CITEQD KIAERIE+EGKGC++VVNKWDTIPNKNQ+TA +YE DVREKLR L WAPIVYS
Sbjct: 467 CITEQDLKIAERIEREGKGCLVVVNKWDTIPNKNQETAAHYEDDVREKLRSLKWAPIVYS 526

Query: 499 TAIAGQSVDKIIDAASEVEKERSRRLGTSILNQVVREALAFXXXXXXXXXXXXXVYYCTQ 558
           TAI G SVD I+ AA+ V+KERSRRL T+ILNQV+REA+AF             VYYCTQ
Sbjct: 527 TAITGHSVDNIVVAAATVQKERSRRLSTAILNQVIREAVAFKSPPRTRGGKRGRVYYCTQ 586


>AT5G39960.1 | Symbols:  | GTP binding;GTP binding |
           chr5:15994195-15996820 FORWARD LENGTH=621
          Length = 621

 Score =  199 bits (505), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 152/507 (29%), Positives = 251/507 (49%), Gaps = 70/507 (13%)

Query: 132 LLPRVAIVGRPNVGKSALFNRFVGGNKAIVVDEP--GVTRDRLYGRSYWGEHEFMVVDTG 189
           LLP V ++GRPNVGKSAL+NR +   +A+V + P   VTRD   G +  G+  F V+D+ 
Sbjct: 116 LLPTVMLMGRPNVGKSALYNRLIRRREALVYNTPDDHVTRDIREGIAKLGDLRFNVLDSA 175

Query: 190 GVLTVSKSQSAVMEELAITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVIVFV 249
           G+ T   S + +    A+T  +                            +  +   V +
Sbjct: 176 GIETEVSSGTILGRTTAMTANV----------------------------LARTQFAVLI 207

Query: 250 VDGQAGLTAADEEIADWLRKYYSKKYIILAVNKCESPRKRIMQASEFWSLGF-EPIPISA 308
           +D +AGL   D E+  WLRK+  +   I+ +NK ES       ASE  +LGF EPI ISA
Sbjct: 208 IDVRAGLHPLDLEVGKWLRKHAPQIKPIVVMNKSESIGSLDEVASEALALGFGEPIAISA 267

Query: 309 ISGTGTGELLDLVCSGLKK--------------VEEPKNL----DEEDYVPSISIVGRPN 350
            +G G   L +++   L+               V   +NL    DE      ++IVG+PN
Sbjct: 268 ETGLGMTTLYEVLRPLLEDYTVEMLNDIGSQDDVLTDENLSDEIDESKLPLQLAIVGKPN 327

Query: 351 VGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGVDGQKFRLIDTAGIRRRAAVVSAGS 410
           VGKS++LNAL+ E+R +V P +G TRDA+  +F    G+   L+DTAG   R        
Sbjct: 328 VGKSTLLNALLEEERVLVGPEAGLTRDAVRVQFE-FQGRTVYLVDTAGWLERT---ERDK 383

Query: 411 TTEALSGNRAFRAIRRSDIVALV------IEALSCITEQDFKIAERIEKEGKGCVIVVNK 464
              +LS  ++ +++ R+ ++ALV      I+A   +T  +  IA R  +EG+G V++VNK
Sbjct: 384 GPASLSIMQSRKSLMRAHVIALVLDAEEIIKAKCSMTHSEVVIARRAVEEGRGLVVIVNK 443

Query: 465 WDTIPNKNQQTATYYEQ-------DVREKLRGLDWAPIVYSTAIAGQSVDKIIDAASEVE 517
            D +  + ++ +  Y++       +++  +  +   P+V+ +A+ G+   +++   ++  
Sbjct: 444 MDRL--RGRENSEMYKKIKEAVPIEIQTVIPQITGIPVVFISALEGRGRMEVMKEVTDTY 501

Query: 518 KERSRRLGTSILNQVVREALAFXXXXXXXXXXXXXVYYCTQAAIRPPTFVFFVNDSKLFP 577
           K    RL T  LN+ +R+ ++              + + TQ   RPPTFV FV+      
Sbjct: 502 KRWCSRLSTGRLNRWLRKVMS--RHSWKDTASQPKIKFFTQVKARPPTFVAFVSGKTQLL 559

Query: 578 ETYRRYMEKQLRMDAGFSGTPIRLLWR 604
           E+  R++ + L+ D    GTPIR++ R
Sbjct: 560 ESDIRFLTRSLKEDFDLGGTPIRIIQR 586


>AT1G78010.1 | Symbols:  | tRNA modification GTPase, putative |
           chr1:29333535-29336297 FORWARD LENGTH=560
          Length = 560

 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 101/174 (58%), Gaps = 14/174 (8%)

Query: 343 ISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGVDGQKFRLIDTAGIRRR 402
           I+IVGRPNVGKSS+LNA    +R IV+ ++GTTRD ++   T V G    L+DTAGIR  
Sbjct: 320 IAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVVEANVT-VRGVPITLLDTAGIRET 378

Query: 403 AAVVSAGSTTEALSGNRAFRAIRRSDIVALVIEALSCITEQDFKIAERIEKEGKGCVIVV 462
             +V      E +   R+  A + +D++ + + A+   TE+D ++  +I+ + K  ++V+
Sbjct: 379 NDIV------EKIGVERSETAAKVADVIIMAVSAVEGWTEEDTELLRKIQSD-KPMILVM 431

Query: 463 NKWDTIPNKNQQTATYYEQDVREKLRGLDWAPIVYSTAIAGQSVDKIIDAASEV 516
           NK D  P  +       +Q  +E++    +   V+++A+ GQ ++++ DA  E+
Sbjct: 432 NKIDCAPPGS--CDQLEDQRKKEEV----FHKSVFTSAVTGQGIEELEDAILEI 479



 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 93/217 (42%), Gaps = 60/217 (27%)

Query: 130 DRLLP---RVAIVGRPNVGKSALFNRFVGGNKAIVVDEPGVTRDRLYGRSYWGEHEFMVV 186
           D+LL    ++AIVGRPNVGKS+L N +    +AIV +  G TRD +            ++
Sbjct: 311 DKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVVEANVTVRGVPITLL 370

Query: 187 DTGGVLTVSKSQSAVMEELAITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVI 246
           DT G+    +  + ++E++                          +ER  TAA + + VI
Sbjct: 371 DTAGI----RETNDIVEKIG-------------------------VERSETAA-KVADVI 400

Query: 247 VFVVDGQAGLTAADEEIADWLRKYYSKKYIILAVNK--CESP-----------RKRIMQA 293
           +  V    G T  D E+   LRK  S K +IL +NK  C  P           ++ +   
Sbjct: 401 IMAVSAVEGWTEEDTEL---LRKIQSDKPMILVMNKIDCAPPGSCDQLEDQRKKEEVFHK 457

Query: 294 SEFWSLGFEPIPISAISGTGTGELLDLVCS--GLKKV 328
           S F          SA++G G  EL D +    GL +V
Sbjct: 458 SVF---------TSAVTGQGIEELEDAILEILGLDRV 485


>AT5G66470.1 | Symbols:  | RNA binding;GTP binding |
           chr5:26541986-26544302 REVERSE LENGTH=427
          Length = 427

 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 122/304 (40%), Gaps = 72/304 (23%)

Query: 30  LSPRKSIFIPRRSLSRPVLRFSSAEF-SGSVDDDEEPDQFDYPEEXXXXXXXLALEQEAK 88
           LS  K ++I +RS       FS  E     ++DDEE  + D  +E               
Sbjct: 57  LSSSKKLWIRQRS-------FSEMEVEQAQLEDDEEQVEIDIVDEA-------------- 95

Query: 89  DAVLEYSSSLDHVLTIEDEIDLKE---TAQTHXXXXXXXXXIIPDRLLPRVAIVGRPNVG 145
            ++L  S   D  + + D+ +++E   T  TH                  VA+VG PNVG
Sbjct: 96  -SLLSLSMKPDRNMALLDDYEMEELGHTPNTHHRSGY-------------VAVVGMPNVG 141

Query: 146 KSALFNRFVGGNKAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVLTVSKSQSAVMEEL 205
           KS L N+ +G   +IV D+P  TR R+ G     E++ ++ DT GV+             
Sbjct: 142 KSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVI------------- 188

Query: 206 AITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVIVFVVDGQAGLTAADEEIAD 265
                           E  + R+ +M+ +    A   +  +V +VD     T  +E + +
Sbjct: 189 ----------------EKKMHRLDTMMMKNVRDAAINADCVVILVDACKTPTNIEEVLKE 232

Query: 266 WLRKYYSKKYIILAVNKCESPRKRIMQASEFWSLGF----EPIPISAISGTGTGELLDLV 321
            L     K  ++L +NK +  +   +     W   F    E IP+SA  G G  ++ + +
Sbjct: 233 GLGDLEKKPPMLLVMNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGIEDVKEWI 292

Query: 322 CSGL 325
            S L
Sbjct: 293 LSKL 296


>AT1G52980.1 | Symbols:  | GTP-binding family protein |
           chr1:19737493-19740201 FORWARD LENGTH=576
          Length = 576

 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 18/144 (12%)

Query: 240 IEESSVIVFVVDGQAGLTAADEEIADWLRKYYSKKYIILAVNKCE-------SPRKRIMQ 292
           I+ S VIV V+D +         +   L++++  K++IL +NKC+           R++ 
Sbjct: 213 IDSSDVIVQVIDARDPQGTRCHHLEKTLKEHHKHKHMILLLNKCDLVPAWATKGWLRVL- 271

Query: 293 ASEFWSLGFEPIPISAISGTGTGELLDLVCSGLKKVEEPKNLDEEDYVPSISIVGRPNVG 352
           + E+ +L F     S     G G LL ++        +   L  +    S+  VG PNVG
Sbjct: 272 SKEYPTLAFH---ASVNKSFGKGSLLSVL-------RQFARLKSDKQAISVGFVGYPNVG 321

Query: 353 KSSILNALVGEDRTIVSPISGTTR 376
           KSS++N L  ++   V+PI G T+
Sbjct: 322 KSSVINTLRTKNVCKVAPIPGETK 345