Miyakogusa Predicted Gene
- Lj3g3v3235440.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3235440.1 Non Chatacterized Hit- tr|B9S3E6|B9S3E6_RICCO
Transcriptional regulator SUPERMAN, putative
OS=Ricinu,38.78,3e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; no descriptio,CUFF.45466.1
(164 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G53820.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 72 2e-13
AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers sup... 71 3e-13
AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |... 70 7e-13
AT3G09290.1 | Symbols: TAC1 | telomerase activator1 | chr3:28561... 70 9e-13
AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc fin... 68 2e-12
AT2G42410.1 | Symbols: ZFP11, ATZFP11 | zinc finger protein 11 |... 67 4e-12
AT5G43540.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 64 5e-11
AT4G17810.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 64 5e-11
AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 | chr1:25016... 49 1e-06
AT1G68360.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 48 3e-06
AT5G27880.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 47 5e-06
AT5G05120.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 46 9e-06
AT3G23140.1 | Symbols: URO | C2H2 and C2HC zinc fingers superfam... 46 9e-06
>AT3G53820.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr3:19938706-19939134 FORWARD LENGTH=142
Length = 142
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 67/141 (47%), Gaps = 39/141 (27%)
Query: 23 YECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSSNQTQPSLEVHHQKNPELEEQNKPNL 82
Y C FC+RGFSNAQALGGHMNIHRKD+AKL+Q
Sbjct: 21 YICEFCERGFSNAQALGGHMNIHRKDRAKLRQA--------------------------- 53
Query: 83 NLKYHHQQDHVLLHMR--------QLPLFAES--PISSGEAQILPQAQIQGEVQ-VVTSE 131
NLK +D + R +LP F ++ P GE + E + + +
Sbjct: 54 NLKEEDSEDAICTTSRNRFGQELIELPFFVDTVGPRRKGEDDKSEKGLGDEEKKNMRILQ 113
Query: 132 GALSQGSSSDLDLELRLGPEP 152
ALSQ S+ +DLELRLG +P
Sbjct: 114 KALSQ-SADVIDLELRLGLDP 133
>AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers
superfamily protein | chr5:1828426-1829106 REVERSE
LENGTH=226
Length = 226
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 13 GASKVTPPKSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQS 56
G + PP+SY C+FC R F +AQALGGHMN+HR+D+A+LKQQS
Sbjct: 45 GGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQS 88
>AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |
chr2:15827706-15828620 REVERSE LENGTH=304
Length = 304
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 11 EQGASKVTPPKSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQ 54
+ A + PP+SY C+FC+R F +AQALGGHMN+HR+D+A+LKQ
Sbjct: 27 DDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQ 70
>AT3G09290.1 | Symbols: TAC1 | telomerase activator1 |
chr3:2856141-2856659 FORWARD LENGTH=172
Length = 172
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 20 PKSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQ 55
+SY C+FC RGFSNAQALGGHMNIHR+D+AKL+Q+
Sbjct: 32 SRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQK 67
>AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc
fingers superfamily protein | chr3:8242504-8243118
FORWARD LENGTH=204
Length = 204
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 4 DHDQGDNEQGASKVTPPKSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQ 55
D+ Q D++ PP+SY C+FCKR F +AQALGGHMN+HR+D+A+L+ Q
Sbjct: 28 DNCQQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQ 79
>AT2G42410.1 | Symbols: ZFP11, ATZFP11 | zinc finger protein 11 |
chr2:17658150-17658794 FORWARD LENGTH=214
Length = 214
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 19 PPKSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSSNQTQP 62
PPK+Y C+FC+R F +AQALGGHMN+HR+D+AKL+Q S +P
Sbjct: 45 PPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEP 88
>AT5G43540.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:17496993-17497406 FORWARD LENGTH=137
Length = 137
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 31/130 (23%)
Query: 23 YECNFCKRGFSNAQALGGHMNIHRKD---KAKLKQQSSNQTQPSLEVHHQKNPELEEQNK 79
YEC FCKRGF+NAQALGGHMNIHR+D KAK++ + + H +
Sbjct: 35 YECTFCKRGFTNAQALGGHMNIHRRDRLNKAKVQNDADVALSQTHRCFHVAS-------- 86
Query: 80 PNLNLKYHHQQDHVLLHMRQLPLFAESPISSGEAQILPQAQIQGEVQVVTSEGALSQGSS 139
+L + Q D V+L +S Q L + + V EG
Sbjct: 87 ---DLGGYEQVDSVVLR----------TTTSNYIQHLRIGSMATRRENVVVEG------- 126
Query: 140 SDLDLELRLG 149
+++DLELRLG
Sbjct: 127 NEIDLELRLG 136
>AT4G17810.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr4:9906918-9907532 FORWARD LENGTH=204
Length = 204
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 19 PPKSYECNFCKRGFSNAQALGGHMNIHRKDKA 50
PP+SY CNFC+R F +AQALGGHMN+HR+D+A
Sbjct: 42 PPRSYTCNFCRREFRSAQALGGHMNVHRRDRA 73
>AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 |
chr1:25016644-25017237 FORWARD LENGTH=197
Length = 197
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 13 GASKVTPPKSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSSNQTQPSLEVHHQKNP 72
G+ + + YEC +C R F+N+QALGGH N H+K++ LK+ T+ L HH +P
Sbjct: 31 GSGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATR-GLPRHHNFHP 89
>AT1G68360.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr1:25621678-25622412 REVERSE LENGTH=244
Length = 244
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 21 KSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQ 54
+ YEC +C R F N+QALGGH N H+K++ +LK+
Sbjct: 71 RKYECQYCCREFGNSQALGGHQNAHKKERQQLKR 104
>AT5G27880.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:9885908-9886744 FORWARD LENGTH=278
Length = 278
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 21 KSYECNFCKRGFSNAQALGGHMNIHRKDK 49
K Y C+FCK+GFS +QALGGH N H++++
Sbjct: 78 KIYTCHFCKKGFSTSQALGGHQNAHKQER 106
>AT5G05120.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:1511232-1511837 FORWARD LENGTH=201
Length = 201
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 23 YECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSS-----NQTQPSLEVH 67
Y+C +C R F QALGGH N HRK++ KQQ + N+ +P L +
Sbjct: 27 YKCKYCPRKFDKTQALGGHQNAHRKEREVEKQQKAFLAHLNRPEPDLYAY 76
>AT3G23140.1 | Symbols: URO | C2H2 and C2HC zinc fingers superfamily
protein | chr3:8250579-8251097 FORWARD LENGTH=172
Length = 172
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 21 KSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSSNQTQPSLEVHHQKNPELEEQNKP 80
++Y+C+ CKRGF+N QALGGH NIHR+++ + SS+ + N
Sbjct: 19 RTYDCDICKRGFTNPQALGGHNNIHRRERERYPSSSSSSHSFPFSLPLPSQSPSSSTNFT 78
Query: 81 NLNLKYHHQQDHVLLHMRQLPLFAESPISSGEAQILPQAQIQGEVQVVTSEGALSQGSSS 140
N + + + LH P PI+ Q G G +QG+S
Sbjct: 79 NPPPYFPTIESY--LHQGSQP-----PINPSH-----NTQYFGSSSSSRGGGRFAQGASH 126
Query: 141 DLDLELRLG 149
DL+L L LG
Sbjct: 127 DLNLSLGLG 135