Miyakogusa Predicted Gene

Lj3g3v3213220.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3213220.3 Non Chatacterized Hit- tr|H9H6E0|H9H6E0_MONDO
Uncharacterized protein OS=Monodelphis domestica
GN=NU,35.2,2e-18,NUDIX,NUDIX hydrolase domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no description,NUDIX ,CUFF.45459.3
         (249 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G46200.1 | Symbols: aTNUDT9, NUDT9 | nudix hydrolase homolog ...   315   2e-86

>AT3G46200.1 | Symbols: aTNUDT9, NUDT9 | nudix hydrolase homolog 9 |
           chr3:16969283-16971017 FORWARD LENGTH=311
          Length = 311

 Score =  315 bits (807), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 152/234 (64%), Positives = 186/234 (79%), Gaps = 3/234 (1%)

Query: 19  QIAQYGG-CALYTGGASDHEPHLCLHLGLTDYRTFVGTNLSPLWERFLIPSEDDSVICQH 77
           Q  +YGG C     G+++  PH+CL LGLTDYRTFVGTNLS LWE+FL+ SEDDSV C+H
Sbjct: 70  QKFRYGGYCLDDDDGSTNEVPHVCLRLGLTDYRTFVGTNLSSLWEKFLVTSEDDSVRCRH 129

Query: 78  TSRALGNGAVVETIDKKILVLQRSNNVGEFPGYFVFLGGHPEPQEVGIASHQHVRELM-- 135
           TS  LGNGAV+ET DKKI+VL+RSNNVGEFPG++VF GGHPEP  VGI  HQ    +   
Sbjct: 130 TSSPLGNGAVIETSDKKIIVLRRSNNVGEFPGHYVFPGGHPEPTAVGIDYHQLENNVQTG 189

Query: 136 ESINIKVSQEMFDSIVREVVEEIGVPASSLSNPAFIGISRRDLNVRPAAFFFIKCNLDSK 195
           E +N KV+QEMFDSI+ EVVEE G+PASSLS+P FIGISRR+LNVRPA FF++KC+  S 
Sbjct: 190 EVLNKKVTQEMFDSIICEVVEETGIPASSLSSPLFIGISRRELNVRPAMFFYLKCSHHSD 249

Query: 196 EVQQFYSSAQDGYESTQLYAFPMDELEKMASRMPGCHRGGFALYKLMVDTMKIT 249
           ++Q+ YSSA+DG+ESTQL+   +DEL+ M SRMPGCH GGFALY+LM+  +K T
Sbjct: 250 DIQRLYSSAEDGFESTQLHTVSLDELKMMTSRMPGCHHGGFALYELMLQRLKNT 303