Miyakogusa Predicted Gene
- Lj3g3v3211130.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3211130.1 tr|G7JUT4|G7JUT4_MEDTR SCARECROW-like protein
OS=Medicago truncatula GN=MTR_4g064120 PE=4 SV=1,80.38,0,FAMILY NOT
NAMED,NULL; GRAS,Transcription factor GRAS,CUFF.45441.1
(210 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G29065.1 | Symbols: | GRAS family transcription factor | chr... 289 8e-79
AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCARECROW-like 14... 281 3e-76
AT2G29060.1 | Symbols: | GRAS family transcription factor | chr... 269 1e-72
AT3G46600.3 | Symbols: | GRAS family transcription factor | chr... 263 7e-71
AT3G46600.1 | Symbols: | GRAS family transcription factor | chr... 263 9e-71
AT3G46600.2 | Symbols: | GRAS family transcription factor | chr... 262 1e-70
AT1G07520.1 | Symbols: | GRAS family transcription factor | chr... 261 3e-70
AT2G37650.1 | Symbols: | GRAS family transcription factor | chr... 252 1e-67
AT5G59450.1 | Symbols: | GRAS family transcription factor | chr... 245 1e-65
AT5G48150.2 | Symbols: PAT1 | GRAS family transcription factor |... 135 2e-32
AT5G48150.1 | Symbols: PAT1 | GRAS family transcription factor |... 135 2e-32
AT1G50600.1 | Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-1... 132 1e-31
AT2G04890.1 | Symbols: SCL21 | SCARECROW-like 21 | chr2:1720575-... 132 1e-31
AT1G21450.1 | Symbols: SCL1 | SCARECROW-like 1 | chr1:7509721-75... 122 1e-28
AT4G17230.1 | Symbols: SCL13 | SCARECROW-like 13 | chr4:9661218-... 122 1e-28
AT1G66350.1 | Symbols: RGL1, RGL | RGA-like 1 | chr1:24748327-24... 117 6e-27
AT2G01570.1 | Symbols: RGA1, RGA | GRAS family transcription fac... 113 8e-26
AT1G14920.1 | Symbols: GAI, RGA2 | GRAS family transcription fac... 112 2e-25
AT5G66770.1 | Symbols: | GRAS family transcription factor | chr... 112 3e-25
AT3G03450.1 | Symbols: RGL2 | RGA-like 2 | chr3:819636-821279 RE... 109 2e-24
AT1G63100.1 | Symbols: | GRAS family transcription factor | chr... 107 7e-24
AT3G50650.1 | Symbols: | GRAS family transcription factor | chr... 104 4e-23
AT3G54220.1 | Symbols: SCR, SGR1 | GRAS family transcription fac... 102 3e-22
AT5G17490.1 | Symbols: RGL3 | RGA-like protein 3 | chr5:5764316-... 100 7e-22
AT1G50420.1 | Symbols: SCL3, SCL-3 | scarecrow-like 3 | chr1:186... 97 6e-21
AT5G52510.1 | Symbols: SCL8 | SCARECROW-like 8 | chr5:21307196-2... 86 2e-17
AT5G41920.1 | Symbols: | GRAS family transcription factor | chr... 86 3e-17
AT4G37650.1 | Symbols: SHR, SGR7 | GRAS family transcription fac... 80 8e-16
AT4G08250.1 | Symbols: | GRAS family transcription factor | chr... 79 3e-15
AT1G55580.1 | Symbols: LAS, SCL18 | GRAS family transcription fa... 72 2e-13
AT3G49950.1 | Symbols: | GRAS family transcription factor | chr... 64 6e-11
AT5G67411.1 | Symbols: | GRAS family transcription factor | chr... 58 5e-09
>AT2G29065.1 | Symbols: | GRAS family transcription factor |
chr2:12485049-12486941 FORWARD LENGTH=630
Length = 630
Score = 289 bits (740), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 166/210 (79%), Gaps = 1/210 (0%)
Query: 1 MIKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERL 60
MI A A LH++DFGI YGFQWP+ I+ +S+R P KLRITGIE P GFRP ER+
Sbjct: 351 MILDVAKDAPVLHIVDFGILYGFQWPMFIQSISDRKDVPRKLRITGIELPQCGFRPAERI 410
Query: 61 EETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDET- 119
EETGRRLA YCKRFNVPFEY A+AS+NWETIR+EDL I+ NE +AVN LR KNL DET
Sbjct: 411 EETGRRLAEYCKRFNVPFEYKAIASQNWETIRIEDLDIRPNEVLAVNAGLRLKNLQDETG 470
Query: 120 IEMNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPR 179
E N PRDAVL LIR +NPD+F H+I+NGSFNAPFF++RF+EA++++SA++D+ DS +PR
Sbjct: 471 SEENCPRDAVLKLIRNMNPDVFIHAIVNGSFNAPFFISRFKEAVYHYSALFDMFDSTLPR 530
Query: 180 DNQWRMMIEREMVGRNAMNVIACEGLERID 209
DN+ R+ ERE GR AMNVIACE +R++
Sbjct: 531 DNKERIRFEREFYGREAMNVIACEEADRVE 560
>AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCARECROW-like 14 |
chr1:2313828-2316137 REVERSE LENGTH=769
Length = 769
Score = 281 bits (718), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 166/205 (80%), Gaps = 2/205 (0%)
Query: 6 AAKAETLHVIDFGIFYGFQWPLLIKFLS-ERDGGPPKLRITGIEYPLPGFRPTERLEETG 64
A A T+H+IDFGI YGFQWP LI LS R GG PKLRITGIE P GFRP E ++ETG
Sbjct: 495 TANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETG 554
Query: 65 RRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIEMNS 124
RLA YC+R NVPFEYNA+A + WETI+VEDLK++ E+V VN + RF+NLLDET+ +NS
Sbjct: 555 HRLARYCQRHNVPFEYNAIAQK-WETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNS 613
Query: 125 PRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDNQWR 184
PRDAVL LIR+INP++F +I++G++NAPFFVTRFREALF++SAV+D+CDS + R+++ R
Sbjct: 614 PRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMR 673
Query: 185 MMIEREMVGRNAMNVIACEGLERID 209
+M E+E GR +NV+ACEG ER++
Sbjct: 674 LMYEKEFYGREIVNVVACEGTERVE 698
>AT2G29060.1 | Symbols: | GRAS family transcription factor |
chr2:12481991-12484075 FORWARD LENGTH=694
Length = 694
Score = 269 bits (688), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 163/205 (79%), Gaps = 1/205 (0%)
Query: 5 AAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLEETG 64
++A A+T+H+IDFGI GFQWP LI L+ R G KLRITGIE P GFRP E + ETG
Sbjct: 421 SSANAKTIHIIDFGISDGFQWPSLIHRLAWRRGSSCKLRITGIELPQRGFRPAEGVIETG 480
Query: 65 RRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIEMNS 124
RRLA YC++FN+PFEYNA+A + WE+I++EDLK+K EFVAVN + RF+NLLDET+ ++S
Sbjct: 481 RRLAKYCQKFNIPFEYNAIAQK-WESIKLEDLKLKEGEFVAVNSLFRFRNLLDETVAVHS 539
Query: 125 PRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDNQWR 184
PRD VL LIR+I PD+F I++GS+NAPFFVTRFRE LF++S+++D+CD+ + R++ R
Sbjct: 540 PRDTVLKLIRKIKPDVFIPGILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLTREDPMR 599
Query: 185 MMIEREMVGRNAMNVIACEGLERID 209
+M E+E GR MNV+ACEG ER++
Sbjct: 600 VMFEKEFYGREIMNVVACEGTERVE 624
>AT3G46600.3 | Symbols: | GRAS family transcription factor |
chr3:17158052-17159799 FORWARD LENGTH=551
Length = 551
Score = 263 bits (672), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 159/206 (77%), Gaps = 1/206 (0%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I + A+KA TLH+IDFGI YGFQWP LI+ LS+RD GPP LR+TGIE P GFRP+ER+E
Sbjct: 274 INELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVE 333
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIE 121
ETGRRL +C +FNVPFEY+ +A +NWE I ++DL I S E VNC+LR + DET+
Sbjct: 334 ETGRRLKRFCDKFNVPFEYSFIA-KNWENITLDDLVINSGETTVVNCILRLQYTPDETVS 392
Query: 122 MNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDN 181
+NSPRD L L R INPD+F + ING++N+PFF+TRFREALF+ S+++D+ ++ + D+
Sbjct: 393 LNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDD 452
Query: 182 QWRMMIEREMVGRNAMNVIACEGLER 207
R ++ERE++ R+AM+VIACEG ER
Sbjct: 453 NCRTLVERELIIRDAMSVIACEGSER 478
>AT3G46600.1 | Symbols: | GRAS family transcription factor |
chr3:17158048-17159799 FORWARD LENGTH=583
Length = 583
Score = 263 bits (671), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 159/206 (77%), Gaps = 1/206 (0%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I + A+KA TLH+IDFGI YGFQWP LI+ LS+RD GPP LR+TGIE P GFRP+ER+E
Sbjct: 306 INELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVE 365
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIE 121
ETGRRL +C +FNVPFEY+ +A +NWE I ++DL I S E VNC+LR + DET+
Sbjct: 366 ETGRRLKRFCDKFNVPFEYSFIA-KNWENITLDDLVINSGETTVVNCILRLQYTPDETVS 424
Query: 122 MNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDN 181
+NSPRD L L R INPD+F + ING++N+PFF+TRFREALF+ S+++D+ ++ + D+
Sbjct: 425 LNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDD 484
Query: 182 QWRMMIEREMVGRNAMNVIACEGLER 207
R ++ERE++ R+AM+VIACEG ER
Sbjct: 485 NCRTLVERELIIRDAMSVIACEGSER 510
>AT3G46600.2 | Symbols: | GRAS family transcription factor |
chr3:17158379-17159799 FORWARD LENGTH=453
Length = 453
Score = 262 bits (670), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 159/206 (77%), Gaps = 1/206 (0%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I + A+KA TLH+IDFGI YGFQWP LI+ LS+RD GPP LR+TGIE P GFRP+ER+E
Sbjct: 176 INELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVE 235
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIE 121
ETGRRL +C +FNVPFEY+ +A +NWE I ++DL I S E VNC+LR + DET+
Sbjct: 236 ETGRRLKRFCDKFNVPFEYSFIA-KNWENITLDDLVINSGETTVVNCILRLQYTPDETVS 294
Query: 122 MNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDN 181
+NSPRD L L R INPD+F + ING++N+PFF+TRFREALF+ S+++D+ ++ + D+
Sbjct: 295 LNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDD 354
Query: 182 QWRMMIEREMVGRNAMNVIACEGLER 207
R ++ERE++ R+AM+VIACEG ER
Sbjct: 355 NCRTLVERELIIRDAMSVIACEGSER 380
>AT1G07520.1 | Symbols: | GRAS family transcription factor |
chr1:2309718-2311805 REVERSE LENGTH=695
Length = 695
Score = 261 bits (666), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 158/210 (75%), Gaps = 1/210 (0%)
Query: 1 MIKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERL 60
MI AA A LH++DFGI YGFQWP+ I+ LS+ + G KLRITGIE P G RPTER+
Sbjct: 416 MILDAAKDASVLHIVDFGILYGFQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPTERI 475
Query: 61 EETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETI 120
++TGRRL YCKRF VPFEYNA+AS+NWETI++E+ KI+ NE +AVN +LRFKNL D
Sbjct: 476 QDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIP 535
Query: 121 -EMNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPR 179
E + PRD L LIR +NP++F S +NGSFNAPFF TRF+EALF++SA++D+ + + +
Sbjct: 536 GEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSK 595
Query: 180 DNQWRMMIEREMVGRNAMNVIACEGLERID 209
+N R+ E E GR MNVIACEG++R++
Sbjct: 596 ENPERIHFEGEFYGREVMNVIACEGVDRVE 625
>AT2G37650.1 | Symbols: | GRAS family transcription factor |
chr2:15792623-15794779 FORWARD LENGTH=718
Length = 718
Score = 252 bits (643), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 159/208 (76%), Gaps = 3/208 (1%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I+ ++ +HVIDFGI YGFQWP LI S G PK+RITGIE+P PGFRP +R+E
Sbjct: 442 IRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMY--GSPKVRITGIEFPQPGFRPAQRVE 499
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIE 121
ETG+RLA Y K F VPFEY A+A + W+ I++EDL I +E VNC+ R +NL DE+++
Sbjct: 500 ETGQRLAAYAKLFGVPFEYKAIA-KKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVK 558
Query: 122 MNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDN 181
+ S RD VL+LI +INPD+F I+NG++NAPFFVTRFREALF+FS+++D+ ++++PR++
Sbjct: 559 VESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPRED 618
Query: 182 QWRMMIEREMVGRNAMNVIACEGLERID 209
+ RM +E E+ GR A+NVIACEG ER++
Sbjct: 619 EERMFLEMEVFGREALNVIACEGWERVE 646
>AT5G59450.1 | Symbols: | GRAS family transcription factor |
chr5:23974808-23976640 FORWARD LENGTH=610
Length = 610
Score = 245 bits (626), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 158/208 (75%), Gaps = 3/208 (1%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I + A KA LH++DFG+ YGFQWP L++ LS+R GGPP LR+TGIE P GFRP++R+E
Sbjct: 323 IYELAMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVE 382
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIE 121
ETGRRL +C +FNVPFE+N +A + WETI +++L I E VNC+ R + DET+
Sbjct: 383 ETGRRLKRFCDQFNVPFEFNFIA-KKWETITLDELMINPGETTVVNCIHRLQYTPDETVS 441
Query: 122 MNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDN 181
++SPRD VL L R INPD+F + ING +N+PFF+TRFREALF++S+++D+ D+ I ++
Sbjct: 442 LDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAED 501
Query: 182 QW--RMMIEREMVGRNAMNVIACEGLER 207
++ R ++ERE++ R+AM+VI+CEG ER
Sbjct: 502 EYKNRSLLERELLVRDAMSVISCEGAER 529
>AT5G48150.2 | Symbols: PAT1 | GRAS family transcription factor |
chr5:19522497-19524053 REVERSE LENGTH=490
Length = 490
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 121/208 (58%), Gaps = 1/208 (0%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I +A + +H+IDF I G QW LI+ + R GGPP++RITGI+ + L
Sbjct: 218 IAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLS 277
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIE 121
G RLA K+FNVPFE+N+V+ ++ ++L ++ E +AVN ++ DE++
Sbjct: 278 IVGNRLAKLAKQFNVPFEFNSVSVSV-SEVKPKNLGVRPGEALAVNFAFVLHHMPDESVS 336
Query: 122 MNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDN 181
+ RD +L +++ ++P + + N F RF E + Y++A+++ D +PRD+
Sbjct: 337 TENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDH 396
Query: 182 QWRMMIEREMVGRNAMNVIACEGLERID 209
+ R+ +E+ + R+ +N+IACEG +R++
Sbjct: 397 KQRINVEQHCLARDVVNIIACEGADRVE 424
>AT5G48150.1 | Symbols: PAT1 | GRAS family transcription factor |
chr5:19522497-19524053 REVERSE LENGTH=490
Length = 490
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 121/208 (58%), Gaps = 1/208 (0%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I +A + +H+IDF I G QW LI+ + R GGPP++RITGI+ + L
Sbjct: 218 IAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLS 277
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIE 121
G RLA K+FNVPFE+N+V+ ++ ++L ++ E +AVN ++ DE++
Sbjct: 278 IVGNRLAKLAKQFNVPFEFNSVSVSV-SEVKPKNLGVRPGEALAVNFAFVLHHMPDESVS 336
Query: 122 MNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDN 181
+ RD +L +++ ++P + + N F RF E + Y++A+++ D +PRD+
Sbjct: 337 TENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDH 396
Query: 182 QWRMMIEREMVGRNAMNVIACEGLERID 209
+ R+ +E+ + R+ +N+IACEG +R++
Sbjct: 397 KQRINVEQHCLARDVVNIIACEGADRVE 424
>AT1G50600.1 | Symbols: SCL5 | scarecrow-like 5 |
chr1:18737398-18739547 REVERSE LENGTH=597
Length = 597
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 117/206 (56%), Gaps = 1/206 (0%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I +A +H+IDF I G QW LI+ L R GGPP +RITGI+ P F LE
Sbjct: 325 IAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLE 384
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIE 121
G+RL + VPFE++ A E + +E L +++ E +AVN L ++ DE++
Sbjct: 385 LVGQRLGKLAEMCGVPFEFHGAALCCTE-VEIEKLGVRNGEALAVNFPLVLHHMPDESVT 443
Query: 122 MNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDN 181
+ + RD +L L++ ++P++ + N F+ RF E + ++ AV++ D + RD+
Sbjct: 444 VENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDH 503
Query: 182 QWRMMIEREMVGRNAMNVIACEGLER 207
+ R+ +E+ + R +N+IACEG+ER
Sbjct: 504 KERINVEQHCLAREVVNLIACEGVER 529
>AT2G04890.1 | Symbols: SCL21 | SCARECROW-like 21 |
chr2:1720575-1721816 REVERSE LENGTH=413
Length = 413
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 119/208 (57%), Gaps = 8/208 (3%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I +A E +H+IDF I G QW LI+ + R GG P +RITG+ L
Sbjct: 148 IAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGV-------GDGSVLV 200
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIE 121
+RL K+F+VPF +NAV+ + E + VE+L ++ E + VN +L DE++
Sbjct: 201 TVKKRLEKLAKKFDVPFRFNAVSRPSCE-VEVENLDVRDGEALGVNFAYMLHHLPDESVS 259
Query: 122 MNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDN 181
M + RD +L +++ ++P + + N F+ RF E L Y++A+++ D ++PR++
Sbjct: 260 MENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNH 319
Query: 182 QWRMMIEREMVGRNAMNVIACEGLERID 209
+ R+ IE+ + R+ +N+IACEG ERI+
Sbjct: 320 KERINIEQHCMARDVVNIIACEGAERIE 347
>AT1G21450.1 | Symbols: SCL1 | SCARECROW-like 1 |
chr1:7509721-7511502 FORWARD LENGTH=593
Length = 593
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 119/211 (56%), Gaps = 7/211 (3%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I +A E +H+IDF I G Q+ LI+ ++E G P+LR+TGI+ P R L
Sbjct: 320 ILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLR 379
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIE 121
G RL + V F++ A+ S+ + L K E + VN + ++ DE++
Sbjct: 380 IIGLRLEQLAEDNGVSFKFKAMPSKT-SIVSPSTLGCKPGETLIVNFAFQLHHMPDESVT 438
Query: 122 MNSPRDAVLHLIRRINPDIFAHSIINGSFN---APFFVTRFREALFYFSAVYDICDSVIP 178
+ RD +LH+++ +NP + +++ N +PFF RF EA Y+SAV++ D +P
Sbjct: 439 TVNQRDELLHMVKSLNPKLV--TVVEQDVNTNTSPFF-PRFIEAYEYYSAVFESLDMTLP 495
Query: 179 RDNQWRMMIEREMVGRNAMNVIACEGLERID 209
R++Q RM +ER+ + R+ +N++ACEG ERI+
Sbjct: 496 RESQERMNVERQCLARDIVNIVACEGEERIE 526
>AT4G17230.1 | Symbols: SCL13 | SCARECROW-like 13 |
chr4:9661218-9662807 REVERSE LENGTH=529
Length = 529
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 1/208 (0%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I +A A +H+IDF I G Q+ LI+ L++R GGPP LR+TG++ + L
Sbjct: 253 ILEAIAGETRVHIIDFQIAQGSQYMFLIQELAKRPGGPPLLRVTGVDDSQSTYARGGGLS 312
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIE 121
G RLA + VPFE++ + R E L ++ V VN ++ DE++
Sbjct: 313 LVGERLATLAQSCGVPFEFHDAIMSGCKVQR-EHLGLEPGFAVVVNFPYVLHHMPDESVS 371
Query: 122 MNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDN 181
+ + RD +LHLI+ ++P + + N F++RF E L Y++A+++ D+ PRD+
Sbjct: 372 VENHRDRLLHLIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAARPRDD 431
Query: 182 QWRMMIEREMVGRNAMNVIACEGLERID 209
+ R+ E+ V R+ +N+IACE ER++
Sbjct: 432 KQRISAEQHCVARDIVNMIACEESERVE 459
>AT1G66350.1 | Symbols: RGL1, RGL | RGA-like 1 |
chr1:24748327-24749862 FORWARD LENGTH=511
Length = 511
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 15/204 (7%)
Query: 7 AKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLEETGRR 66
A AE +HVID G+ +G QWP LI+ L+ R GPP R+TGI Y L ++E G +
Sbjct: 249 ATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTD------IQEVGWK 302
Query: 67 LANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSN-EFVAVNCMLRFKNLLDETIEMNSP 125
L V FE+ ++A N ++ E L I+ E VAVN + LL +
Sbjct: 303 LGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSI--- 359
Query: 126 RDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDNQWRM 185
D L I+ I PDI + N F+ RF E+L Y+S+++D + +D R+
Sbjct: 360 -DKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQD---RV 415
Query: 186 MIEREMVGRNAMNVIACEGLERID 209
M E +GR +N++ACEG +R++
Sbjct: 416 MSEL-FLGRQILNLVACEGEDRVE 438
>AT2G01570.1 | Symbols: RGA1, RGA | GRAS family transcription factor
family protein | chr2:255581-257344 REVERSE LENGTH=587
Length = 587
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 109/200 (54%), Gaps = 11/200 (5%)
Query: 12 LHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLEETGRRLANYC 71
+HVIDF + G QWP L++ L+ R+GGPP R+TGI P P ++ L E G +LA
Sbjct: 323 VHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAP--DNSDHLHEVGCKLAQLA 380
Query: 72 KRFNVPFEYNAVASRNWETIRVEDLKIK--SNEFVAVNCMLRFKNLLDETIEMNSPRDAV 129
+ +V FEY + + + L+++ E VAVN + LL + + V
Sbjct: 381 EAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGI----EKV 436
Query: 130 LHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDNQWRMMIER 189
L ++++I P IF + N P F+ RF E+L Y+S ++D + V ++Q ++M E
Sbjct: 437 LGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGV--PNSQDKVMSEV 494
Query: 190 EMVGRNAMNVIACEGLERID 209
+G+ N++ACEG +R++
Sbjct: 495 -YLGKQICNLVACEGPDRVE 513
>AT1G14920.1 | Symbols: GAI, RGA2 | GRAS family transcription factor
family protein | chr1:5149414-5151015 FORWARD LENGTH=533
Length = 533
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 11/200 (5%)
Query: 12 LHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLEETGRRLANYC 71
+HVIDF + G QWP L++ L+ R GGPP R+TGI P P + L E G +LA+
Sbjct: 271 VHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAP--DNFDYLHEVGCKLAHLA 328
Query: 72 KRFNVPFEYNAVASRNWETIRVEDLKIKSNEF--VAVNCMLRFKNLLDETIEMNSPRDAV 129
+ +V FEY + + L+++ +E VAVN + LL + D V
Sbjct: 329 EAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAI----DKV 384
Query: 130 LHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDNQWRMMIER 189
L ++ +I P+IF + N+P F+ RF E+L Y+S ++D + V Q ++M E
Sbjct: 385 LGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGV--PSGQDKVMSEV 442
Query: 190 EMVGRNAMNVIACEGLERID 209
+G+ NV+AC+G +R++
Sbjct: 443 -YLGKQICNVVACDGPDRVE 461
>AT5G66770.1 | Symbols: | GRAS family transcription factor |
chr5:26660723-26662477 FORWARD LENGTH=584
Length = 584
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 7/209 (3%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGG-PPKLRITGIEYPLPGFRPTERL 60
I +A K+ +H++DFGI G QWP L++ L+ R G P ++R++GI P G P L
Sbjct: 310 ILEATEKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSL 369
Query: 61 EETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETI 120
TG RL ++ K ++ F++ + + + ++ +E +AVN ML+ LLDET
Sbjct: 370 IATGNRLRDFAKVLDLNFDFIPILTP-IHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETP 428
Query: 121 EMNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRD 180
+ D L L + +NP + S N F R + AL ++SAV++ + + RD
Sbjct: 429 TI---VDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRD 485
Query: 181 NQWRMMIEREMVGRNAMNVIACE--GLER 207
++ R+ +ERE+ GR +I E G+ R
Sbjct: 486 SEERVRVERELFGRRISGLIGPEKTGIHR 514
>AT3G03450.1 | Symbols: RGL2 | RGA-like 2 | chr3:819636-821279
REVERSE LENGTH=547
Length = 547
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 8/209 (3%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I +A A +HVID G+ G QWP L++ L+ R GGPP R+TGI P ++ L+
Sbjct: 276 ILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGI--GPPQTENSDSLQ 333
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIK-SNEFVAVNCMLRFKNLLDETI 120
+ G +LA + + V FE+ +A+ + + E + + +E + VN + LL +
Sbjct: 334 QLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSG 393
Query: 121 EMNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRD 180
+ + +L+ ++ I P I + N F+ RF EAL Y+S+++D +
Sbjct: 394 SI----EKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLP 449
Query: 181 NQWRMMIEREMVGRNAMNVIACEGLERID 209
+Q R+M E +GR +NV+A EG +R++
Sbjct: 450 SQDRVMSEV-YLGRQILNVVAAEGSDRVE 477
>AT1G63100.1 | Symbols: | GRAS family transcription factor |
chr1:23399391-23401367 REVERSE LENGTH=658
Length = 658
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 1 MIKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERL 60
M+ +A E +H+IDF I G QWP + L+ R P +RITGI G E L
Sbjct: 375 MLLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGI-----GESKLE-L 428
Query: 61 EETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRF-KNLLDET 119
ETG RL + + N+ FE++ V R E +R+ L +K E VAVNC+++ K L D T
Sbjct: 429 NETGDRLHGFAEAMNLQFEFHPVVDR-LEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGT 487
Query: 120 IEMNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPR 179
+ RD L LIR NP + N+ TR +L Y+SA++D + +
Sbjct: 488 --GAAIRD-FLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLAT 544
Query: 180 DNQWRMMIEREMVGRNAMNVIACEGLER 207
D+ R+ +E + GR N++ACEG R
Sbjct: 545 DSLMRVKVEEMLFGREIRNIVACEGSHR 572
>AT3G50650.1 | Symbols: | GRAS family transcription factor |
chr3:18806472-18808100 REVERSE LENGTH=542
Length = 542
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 5/203 (2%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGG-PPKLRITGIEYPLPGFRPTERL 60
I +A ++ +H++DFGIF G QW L++ L+ R G P ++RI+GI P G P L
Sbjct: 264 ILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRISGIPAPSLGDSPGPSL 323
Query: 61 EETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETI 120
TG RL ++ ++ FE+ V + + + ++ +E + VN ML LLDET
Sbjct: 324 IATGNRLRDFAAILDLNFEFYPVLTP-IQLLNGSSFRVDPDEVLVVNFMLELYKLLDETA 382
Query: 121 EMNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRD 180
+ L L R +NP I S N F R + +L ++SAV++ + + RD
Sbjct: 383 ---TTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEPNLDRD 439
Query: 181 NQWRMMIEREMVGRNAMNVIACE 203
++ R+ +ER + GR M+++ +
Sbjct: 440 SKERLRVERVLFGRRIMDLVRSD 462
>AT3G54220.1 | Symbols: SCR, SGR1 | GRAS family transcription factor
| chr3:20070550-20072625 FORWARD LENGTH=653
Length = 653
Score = 102 bits (253), Expect = 3e-22, Method: Composition-based stats.
Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 22/210 (10%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I++A K +++H+ID I G QWP L L+ R GGPP +R+TG+ + E L+
Sbjct: 391 IQEAFEKEDSVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSM------EALQ 444
Query: 62 ETGRRLANYCKRFNVPFEYNAVASR--NWETIRVEDLKIKSNEFVAVNCMLRFKNLLDET 119
TG+RL+++ + +PFE+ +A + N +T E L ++ E VAV+ + +L D T
Sbjct: 445 ATGKRLSDFADKLGLPFEFCPLAEKVGNLDT---ERLNVRKREAVAVHWLQH--SLYDVT 499
Query: 120 IEMNSPRDA-VLHLIRRINPDIFAHSIINGSFN-APFFVTRFREALFYFSAVYDICDSVI 177
DA L L++R+ P + +++ + A F+ RF EA+ Y+SA++D +
Sbjct: 500 -----GSDAHTLWLLQRLAPKVV--TVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASY 552
Query: 178 PRDNQWRMMIEREMVGRNAMNVIACEGLER 207
+++ R ++E++++ + NV+A G R
Sbjct: 553 GEESEERHVVEQQLLSKEIRNVLAVGGPSR 582
>AT5G17490.1 | Symbols: RGL3 | RGA-like protein 3 |
chr5:5764316-5765887 REVERSE LENGTH=523
Length = 523
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 10/209 (4%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I +A + +HVID G+ G QWP L++ L+ R GGPP R+TG+ P E ++
Sbjct: 249 ILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGNP----SNREGIQ 304
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKS-NEFVAVNCMLRFKNLLDETI 120
E G +LA + V F++N + + + + + ++ +E + VN + +L +
Sbjct: 305 ELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPG 364
Query: 121 EMNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRD 180
+ + +L ++ + P + + N F+ RF EAL Y+S+++D + +
Sbjct: 365 SI----EKLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIP 420
Query: 181 NQWRMMIEREMVGRNAMNVIACEGLERID 209
+Q R+M E +GR +N++A EG +RI+
Sbjct: 421 SQDRVMSEV-YLGRQILNLVATEGSDRIE 448
>AT1G50420.1 | Symbols: SCL3, SCL-3 | scarecrow-like 3 |
chr1:18678177-18679625 REVERSE LENGTH=482
Length = 482
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 64/263 (24%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I +A + +HVID QW L++ + R GPP LRITG+ + E LE
Sbjct: 155 ILEAMEGEKMVHVIDLDASEPAQWLALLQAFNSRPEGPPHLRITGVHH------QKEVLE 208
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAV--------------- 106
+ RL ++ ++PF++N V SR + + VE L++K+ E +AV
Sbjct: 209 QMAHRLIEEAEKLDIPFQFNPVVSR-LDCLNVEQLRVKTGEALAVSSVLQLHTFLASDDD 267
Query: 107 ----NCMLRFKN-----LLDETIEMN------------------SPR------------- 126
NC LRF+N L + M+ SP
Sbjct: 268 LMRKNCALRFQNNPSGVDLQRVLMMSHGSAAEARENDMSNNNGYSPSGDSASSLPLPSSG 327
Query: 127 --DAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDNQWR 184
D+ L+ I ++P + + + N + R E+L+ ++A++D ++ +PR +Q R
Sbjct: 328 RTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDR 387
Query: 185 MMIEREMVGRNAMNVIACEGLER 207
+ +E+ + G N+I+CEG ER
Sbjct: 388 IKVEKMLFGEEIKNIISCEGFER 410
>AT5G52510.1 | Symbols: SCL8 | SCARECROW-like 8 |
chr5:21307196-21309118 FORWARD LENGTH=640
Length = 640
Score = 85.5 bits (210), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 13 HVIDFGIFYGFQWPLLIKFLSERDGG------PPKLRITGIEYPLPGFR----PTERLEE 62
HVIDF I G Q+ L++ LS R G P ++IT + + G ERL+
Sbjct: 369 HVIDFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKA 428
Query: 63 TGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIEM 122
G L+ R + +N V S + E L +E +AVN + + DE++
Sbjct: 429 VGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDESVCT 488
Query: 123 NSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDNQ 182
+PRD +L ++ + P + + N F+ R E+ + A+ + +S +P N
Sbjct: 489 ENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNS 548
Query: 183 WRMMIEREMVGRNAMNVIACEGLERID 209
R +E E +GR +N +ACEG++RI+
Sbjct: 549 DRAKVE-EGIGRKLVNAVACEGIDRIE 574
>AT5G41920.1 | Symbols: | GRAS family transcription factor |
chr5:16779982-16781199 FORWARD LENGTH=405
Length = 405
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGIEYPLPGFRPTERLE 61
I +A +++H+ID + G QWP L L+ R +RITG ++ L
Sbjct: 142 IFQALDGEDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFG------SSSDLLA 195
Query: 62 ETGRRLANYCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCML-RFKNLLDETI 120
TGRRLA++ N+PFE++ + I L + E V V+ M R ++ +
Sbjct: 196 STGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNL 255
Query: 121 EMNSPRDAVLHLIRRINPDIFAHSIINGSF-NAPFFVTRFREALFYFSAVYDICDSVIPR 179
E L ++RR+ P++ S+ + F+ RF EAL Y+SA++D +
Sbjct: 256 E-------TLEILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGE 308
Query: 180 DNQWRMMIEREMVGRNAMNVIACEGLER 207
++ R +E+ ++G N++A G R
Sbjct: 309 ESGERFTVEQIVLGTEIRNIVAHGGGRR 336
>AT4G37650.1 | Symbols: SHR, SGR7 | GRAS family transcription factor
| chr4:17691871-17693466 FORWARD LENGTH=531
Length = 531
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPPKLRITGI----EYPLPGFRPT 57
I +A +H++D + QWP L++ L+ R P LR+T + ++
Sbjct: 246 ILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASH 305
Query: 58 ERLEETGRRLANYCKRFNVPFEYNAVAS-RNWETIRVEDLKIKSNEFVAVNCMLRFKNLL 116
++E G R+ + + VPF++N + + + +L +K +E +A+NC+ +
Sbjct: 306 RMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIA 365
Query: 117 DETIEMNSPRDAVLHLIRRINPDIFA----HSIINGSFNAPF---FVTRFREALFYFSAV 169
SPRDAV+ RR+ P I + + G F F+ F E L +F
Sbjct: 366 SR----GSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVC 421
Query: 170 YDICDSVIPRDNQWRMMIEREMVGRNAMNVIACE 203
++ + PR + R+M+ER GR ++++ACE
Sbjct: 422 FESWEESFPRTSNERLMLER-AAGRAIVDLVACE 454
>AT4G08250.1 | Symbols: | GRAS family transcription factor |
chr4:5196787-5198238 FORWARD LENGTH=483
Length = 483
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Query: 12 LHVIDFGIFYGFQWPLLIKFLSERDGGPP--KLRITGIEYPLPGFRPTERLEETGRRLAN 69
+H++D+ I G QW L++ L R+ GP LRIT + G + ++ETGRRL
Sbjct: 215 IHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTA 274
Query: 70 YCKRFNVPFEYNAVASRNWETIRVEDLKIKSNEFVAVNCMLRFKNLLDETIEMNSPRDAV 129
+ PF Y + LK+ E V +NCML +T S +
Sbjct: 275 FADSIGQPFSYQHC-KLDTNAFSTSSLKLVRGEAVVINCMLHLPRFSHQT---PSSVISF 330
Query: 130 LHLIRRINPDI--FAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDNQWRMMI 187
L + +NP + H + G F+ RF + L FSA++D ++ + N R +
Sbjct: 331 LSEAKTLNPKLVTLVHEEV-GLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFV 389
Query: 188 EREMVG 193
ER +G
Sbjct: 390 ERVFIG 395
>AT1G55580.1 | Symbols: LAS, SCL18 | GRAS family transcription
factor | chr1:20764106-20765443 FORWARD LENGTH=445
Length = 445
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 12 LHVIDFGIFYGFQWPLLIKFLSERDGGPPK----LRITGIEYPLPGFRPTERLEETGRRL 67
LH++D I G QWP L++ L+ER P LRITG + G L TG RL
Sbjct: 179 LHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRDVTG------LNRTGDRL 232
Query: 68 ANYCKRFNVPFEYNAVASRNWETIRVEDL------------KIKSNEFVAVNCMLRFKNL 115
+ + F+++ + I EDL E +AVNC+ +
Sbjct: 233 TRFADSLGLQFQFHTLV------IVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKI 286
Query: 116 LDETIEMNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDS 175
++ +M L I+ +N I + + F+ RF EA+ ++ A++D ++
Sbjct: 287 FNDDGDMIGH---FLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEA 343
Query: 176 VIPRDNQWRMMIEREMVGRNAMNVIACEGLER 207
+P +++ R+ +E+ G+ ++V+A E ER
Sbjct: 344 TLPPNSRERLTLEQRWFGKEILDVVAAEETER 375
>AT3G49950.1 | Symbols: | GRAS family transcription factor |
chr3:18522570-18523802 FORWARD LENGTH=410
Length = 410
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 15/218 (6%)
Query: 2 IKKAAAKAETLHVIDFGIFYGFQWPLLIKFLSERDGGPP---KLRITGIEYPLPGFRPTE 58
I A T+H++D + + Q P LI ++ R PP KL + P F
Sbjct: 128 ILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINIS 187
Query: 59 RLEETGRRLANYCKRFNVPFEYNAVASRNWETIR--VEDLKIKS---NEFVAVNCMLRFK 113
EE G +L N+ N+ E+ V S + ++ L+I NE + VNC + +
Sbjct: 188 -YEELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLR 246
Query: 114 NLLDE--TIEMNSPRDAVLHLIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYD 171
+ +E T +S R L +R +NP I + + V R + A YF +D
Sbjct: 247 YIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFD 306
Query: 172 ICDSVIPRDNQWRMMIEREMVGRNAMNVIACEGLERID 209
D+ + +W E E + NV+A EG ER++
Sbjct: 307 TTDTFMSEQRRW---YEAE-ISWKIENVVAKEGAERVE 340
>AT5G67411.1 | Symbols: | GRAS family transcription factor |
chr5:26898401-26899097 REVERSE LENGTH=202
Length = 202
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 23 FQWPLLIKFLSER--DGGPPKLRITGIEYPLPGFRPTERL----EETGRRLANYCKRFNV 76
Q P LI ++ + PP L++T I F P L EE G +L N+ NV
Sbjct: 1 MQIPTLIDSMANKLHKKPPPLLKLTVIASD-AEFHPPPLLGISYEELGSKLVNFATTRNV 59
Query: 77 PFEYNAVASRNWETIR--VEDLKIKS---NEFVAVNCMLRFKNLLDETIEMNSPRDAVLH 131
E+ ++S + + +E L+I NE + VNC + + DE + N R L
Sbjct: 60 AMEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDEILTSNL-RSVFLK 118
Query: 132 LIRRINPDIFAHSIINGSFNAPFFVTRFREALFYFSAVYDICDSVIPRDNQWRMMIEREM 191
+R +NP I + F + F++R R Y YD + + R ++ R E +
Sbjct: 119 ELRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEAD- 177
Query: 192 VGRNAMNVIACEGLERID 209
+ NV+A EG ER++
Sbjct: 178 ISWKIDNVVAKEGAERVE 195