Miyakogusa Predicted Gene

Lj3g3v3200870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3200870.1 Non Chatacterized Hit- tr|E1ZAI7|E1ZAI7_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,54.22,7e-19,Tim10-like,Mitochondrial inner membrane
translocase complex, Tim8/9/10/13-zinc finger-like;
MITOCHON,CUFF.45428.1
         (93 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G46560.1 | Symbols: TIM9, emb2474 | Tim10/DDP family zinc fin...   154   1e-38

>AT3G46560.1 | Symbols: TIM9, emb2474 | Tim10/DDP family zinc
          finger protein | chr3:17138632-17139301 FORWARD
          LENGTH=93
          Length = 93

 Score =  154 bits (388), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 72/93 (77%), Positives = 81/93 (87%)

Query: 1  MDKSMLADMDSLGEADKQRMSTMIDQLQIRDSLRMYNSLVERCFTDCVDTFKHKSLQKQE 60
          MD SM+A +D L E DK +M++MIDQLQ+RDSLRMYNSLVERCF DCVD+F  KSLQKQE
Sbjct: 1  MDASMMAGLDGLPEEDKAKMASMIDQLQLRDSLRMYNSLVERCFVDCVDSFTRKSLQKQE 60

Query: 61 ESCVRRCAEKFLKHSMRVGMRFAELNQGAATQD 93
          E+CV RCAEKFLKH+MRVGMRFAELNQ A TQD
Sbjct: 61 ETCVMRCAEKFLKHTMRVGMRFAELNQNAPTQD 93