Miyakogusa Predicted Gene
- Lj3g3v3189720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3189720.1 Non Chatacterized Hit- tr|I1NHI3|I1NHI3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51262
PE,40.85,1e-18,coiled-coil,NULL; seg,NULL; KAP,NULL;
ARM_REPEAT,Armadillo; ARMADILLO REPEAT-CONTAINING
PROTEIN-LIKE,CUFF.45421.1
(220 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 308 1e-84
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 306 8e-84
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 213 9e-56
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 202 1e-52
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 201 3e-52
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 201 4e-52
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 172 1e-43
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 172 1e-43
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 167 6e-42
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 155 2e-38
AT3G01400.1 | Symbols: | ARM repeat superfamily protein | chr3:... 140 5e-34
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 140 8e-34
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 140 9e-34
AT5G58680.1 | Symbols: | ARM repeat superfamily protein | chr5:... 133 1e-31
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 115 3e-26
AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556... 112 2e-25
AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556... 112 2e-25
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 112 2e-25
AT5G62560.1 | Symbols: | RING/U-box superfamily protein with AR... 112 3e-25
AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 | chr5:26... 94 9e-20
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 94 1e-19
AT5G40140.1 | Symbols: | RING/U-box superfamily protein with AR... 86 3e-17
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 83 2e-16
AT4G31890.2 | Symbols: | ARM repeat superfamily protein | chr4:... 81 5e-16
AT4G31890.1 | Symbols: | ARM repeat superfamily protein | chr4:... 81 5e-16
AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 | chr3:17644434-17... 79 2e-15
AT2G25130.1 | Symbols: | ARM repeat superfamily protein | chr2:... 78 4e-15
AT4G12710.1 | Symbols: | ARM repeat superfamily protein | chr4:... 77 9e-15
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 75 5e-14
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 75 5e-14
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 72 3e-13
AT1G77460.2 | Symbols: | Armadillo/beta-catenin-like repeat ; C... 68 5e-12
AT1G77460.1 | Symbols: | Armadillo/beta-catenin-like repeat ; C... 68 5e-12
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 67 1e-11
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 66 2e-11
AT3G03440.1 | Symbols: | ARM repeat superfamily protein | chr3:... 61 5e-10
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 61 6e-10
AT2G22125.1 | Symbols: CSI1 | binding | chr2:9406793-9414223 FOR... 58 6e-09
AT5G14510.1 | Symbols: | ARM repeat superfamily protein | chr5:... 56 2e-08
AT1G08315.1 | Symbols: | ARM repeat superfamily protein | chr1:... 56 2e-08
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 55 3e-08
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 55 3e-08
AT2G44900.1 | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 ... 54 8e-08
AT3G60350.1 | Symbols: ARABIDILLO-2, ARABIDILLO2 | ARABIDILLO-2 ... 53 1e-07
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 52 2e-07
AT3G20170.1 | Symbols: | ARM repeat superfamily protein | chr3:... 52 3e-07
AT5G19330.1 | Symbols: ARIA | ARM repeat protein interacting wit... 52 3e-07
AT5G19330.2 | Symbols: ARIA | ARM repeat protein interacting wit... 52 4e-07
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 49 2e-06
AT1G44120.1 | Symbols: | Armadillo/beta-catenin-like repeat ; C... 49 4e-06
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 308 bits (790), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 145/182 (79%), Positives = 170/182 (93%)
Query: 1 MEARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQG 60
MEARENAAATLFSLSV+DENKVTIG++GAIPPLVTLLSEG+QRGKKDAATALFNLCI+QG
Sbjct: 454 MEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQG 513
Query: 61 NKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIG 120
NKGKAVRAG++P LM+LLTEP GMVDE+L+ILAILSSHPDGK+ +GAADAVP+LV+FI
Sbjct: 514 NKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIR 573
Query: 121 NGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLIDRMS 180
+GSPRNKENSAAVLVHL S +QQ+L +A KLG+M L+E+A++GTDRGKRKAAQL++R S
Sbjct: 574 SGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLLNRFS 633
Query: 181 RF 182
RF
Sbjct: 634 RF 635
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 18 DENKVTIGSSGAIPPLVTLLS-EGTQRGKKDAATALFNLCIYQGNKGKAVR-AGVIPTLM 75
+ N+V I +SGAIP LV LL+ R ++ A T++ NL I Q NKGK V +G +P ++
Sbjct: 387 NHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIV 446
Query: 76 KLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLV 135
+L + S + A A L LS + K IGAA A+P LV + GS R K+++A L
Sbjct: 447 HVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALF 506
Query: 136 HL 137
+L
Sbjct: 507 NL 508
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 306 bits (783), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 148/182 (81%), Positives = 166/182 (91%)
Query: 1 MEARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQG 60
MEARENAAATLFSLSV+DENKVTIG+ GAIPPLV LL+EGTQRGKKDAATALFNLCIYQG
Sbjct: 449 MEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQG 508
Query: 61 NKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIG 120
NKGKA+RAGVIPTL +LLTEP GMVDEALAILAILSSHP+GKA IG++DAVP LVEFI
Sbjct: 509 NKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIR 568
Query: 121 NGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLIDRMS 180
GSPRN+EN+AAVLVHL SGD Q+L +A KLGLM PL++LA +GTDRGKRKAAQL++R+S
Sbjct: 569 TGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERIS 628
Query: 181 RF 182
R
Sbjct: 629 RL 630
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 69/119 (57%)
Query: 19 ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMKLL 78
+N+V I +GAIP LV LLS R ++ + TAL NL I + NKG V AG IP ++++L
Sbjct: 385 DNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVL 444
Query: 79 TEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLVHL 137
+ S + A A L LS + K IGA A+P LV + G+ R K+++A L +L
Sbjct: 445 KKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNL 503
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 213 bits (541), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 142/177 (80%)
Query: 1 MEARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQG 60
MEARENAAATLFSLSV+DENKV IG++GAI L++LL EGT+RGKKDAATA+FNLCIYQG
Sbjct: 442 MEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQG 501
Query: 61 NKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIG 120
NK +AV+ G++ L +LL + GGMVDEALAILAILS++ +GK AI A+++P+LVE I
Sbjct: 502 NKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAIAEAESIPVLVEIIR 561
Query: 121 NGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLID 177
GSPRN+EN+AA+L +L G+ + L A ++G L EL ++GTDR KRKAA L++
Sbjct: 562 TGSPRNRENAAAILWYLCIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLLE 618
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
Query: 19 ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMKLL 78
+N+V I +GAIP LV LLS R ++ + TAL NL I +GNKG V AG I ++++L
Sbjct: 378 DNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVL 437
Query: 79 TEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLVHLS 138
S + A A L LS + K AIGAA A+ L+ + G+ R K+++A + +L
Sbjct: 438 KNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLC 497
Query: 139 SGDQQYLAQAHKLGLMTPLLEL 160
Q ++A K G++ PL L
Sbjct: 498 IY-QGNKSRAVKGGIVDPLTRL 518
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 137/182 (75%), Gaps = 1/182 (0%)
Query: 1 MEARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQG 60
MEARENAAATLFSLS+ DENK+ IG SGAIP LV LL GT RGKKDAATALFNLCIY G
Sbjct: 428 MEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHG 487
Query: 61 NKGKAVRAGVIPTLMKLLTEPS-GGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFI 119
NKG+AVRAG++ L+K+L++ + MVDEAL IL++L+++ D K+AI A+ +P L+ +
Sbjct: 488 NKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGIL 547
Query: 120 GNGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLIDRM 179
RN+EN+AA+L+ L D + L +LG + PL++L+++GT+RGKRKA L++ +
Sbjct: 548 QTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELL 607
Query: 180 SR 181
+
Sbjct: 608 RK 609
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Query: 2 EARENAAATLFSLSVVD-ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQG 60
E R NA + + SLS +N++ I +GAIP LV LL+ +++A T + NL IY+
Sbjct: 346 EDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYEN 405
Query: 61 NKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIG 120
NK + AG + +++++L + + A A L LS + K IG + A+P LV+ +
Sbjct: 406 NKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLE 465
Query: 121 NGSPRNKENSAAVLVHLS--SGDQQYLAQAHKLGLMTPLLELAQHGT 165
NG+PR K+++A L +L G++ +A + G++T L+++ T
Sbjct: 466 NGTPRGKKDAATALFNLCIYHGNK---GRAVRAGIVTALVKMLSDST 509
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 201 bits (511), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/182 (56%), Positives = 136/182 (74%), Gaps = 1/182 (0%)
Query: 1 MEARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQG 60
MEARENAAATLFSLS+ DENK+ IG+SGAI LV LL G+ RGKKDAATALFNLCIYQG
Sbjct: 291 MEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQG 350
Query: 61 NKGKAVRAGVIPTLMKLLTEPSG-GMVDEALAILAILSSHPDGKAAIGAADAVPILVEFI 119
NKG+AVRAG++ L+K+LT+ S M DEAL IL++L+S+ K AI A+A+P L++ +
Sbjct: 351 NKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCL 410
Query: 120 GNGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLIDRM 179
PRN+EN+AA+L+ L D + L +LG + PL+EL++ GT+R KRKA L++ +
Sbjct: 411 QKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELL 470
Query: 180 SR 181
+
Sbjct: 471 RK 472
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 3/162 (1%)
Query: 1 MEARENAAATLFSLSVVD-ENKVTIGSSGAIPPLVTLL-SEGTQRGKKDAATALFNLCIY 58
+E R A + + SLS +N++ I +GAIP LV LL S+G +++A T + NL IY
Sbjct: 207 IEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIY 266
Query: 59 QGNKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEF 118
+ NK + AG + +++ +L S + A A L LS + K IGA+ A+ LV+
Sbjct: 267 EHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDL 326
Query: 119 IGNGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLEL 160
+ GS R K+++A L +L Q +A + G++ PL+++
Sbjct: 327 LQYGSVRGKKDAATALFNLCIY-QGNKGRAVRAGIVKPLVKM 367
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 201 bits (510), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/182 (56%), Positives = 136/182 (74%), Gaps = 1/182 (0%)
Query: 1 MEARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQG 60
MEARENAAATLFSLS+ DENK+ IG+SGAI LV LL G+ RGKKDAATALFNLCIYQG
Sbjct: 439 MEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQG 498
Query: 61 NKGKAVRAGVIPTLMKLLTEPSG-GMVDEALAILAILSSHPDGKAAIGAADAVPILVEFI 119
NKG+AVRAG++ L+K+LT+ S M DEAL IL++L+S+ K AI A+A+P L++ +
Sbjct: 499 NKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCL 558
Query: 120 GNGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLIDRM 179
PRN+EN+AA+L+ L D + L +LG + PL+EL++ GT+R KRKA L++ +
Sbjct: 559 QKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELL 618
Query: 180 SR 181
+
Sbjct: 619 RK 620
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 3/162 (1%)
Query: 1 MEARENAAATLFSLSVVD-ENKVTIGSSGAIPPLVTLL-SEGTQRGKKDAATALFNLCIY 58
+E R A + + SLS +N++ I +GAIP LV LL S+G +++A T + NL IY
Sbjct: 355 IEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIY 414
Query: 59 QGNKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEF 118
+ NK + AG + +++ +L S + A A L LS + K IGA+ A+ LV+
Sbjct: 415 EHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDL 474
Query: 119 IGNGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLEL 160
+ GS R K+++A L +L Q +A + G++ PL+++
Sbjct: 475 LQYGSVRGKKDAATALFNLCIY-QGNKGRAVRAGIVKPLVKM 515
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 125/175 (71%), Gaps = 1/175 (0%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGN 61
EA+EN+AATLFSLSV++ENK+ IG SGAI PLV LL GT RGKKDAATALFNL I+Q N
Sbjct: 642 EAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQEN 701
Query: 62 KGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGN 121
K V++G + L+ L+ +P+ GMVD+A+A+LA L++ P+G+ AIG +P+LVE +
Sbjct: 702 KAMIVQSGAVRYLIDLM-DPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVEL 760
Query: 122 GSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
GS R KEN+AA L+ LS+ ++ + G + PL+ L+Q GT R + KA L+
Sbjct: 761 GSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALL 815
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 67/120 (55%)
Query: 19 ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMKLL 78
+N++ IG+SGAI LV LL +++A TAL NL I NK AG I L+ +L
Sbjct: 577 DNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVL 636
Query: 79 TEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLVHLS 138
S + + A L LS + K IG + A+ LV+ +GNG+PR K+++A L +LS
Sbjct: 637 ENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLS 696
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 125/175 (71%), Gaps = 1/175 (0%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGN 61
EA+EN+AATLFSLSV++ENK+ IG SGAI PLV LL GT RGKKDAATALFNL I+Q N
Sbjct: 639 EAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQEN 698
Query: 62 KGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGN 121
K V++G + L+ L+ +P+ GMVD+A+A+LA L++ P+G+ AIG +P+LVE +
Sbjct: 699 KAMIVQSGAVRYLIDLM-DPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVEL 757
Query: 122 GSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
GS R KEN+AA L+ LS+ ++ + G + PL+ L+Q GT R + KA L+
Sbjct: 758 GSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALL 812
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 67/120 (55%)
Query: 19 ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMKLL 78
+N++ IG+SGAI LV LL +++A TAL NL I NK AG I L+ +L
Sbjct: 574 DNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVL 633
Query: 79 TEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLVHLS 138
S + + A L LS + K IG + A+ LV+ +GNG+PR K+++A L +LS
Sbjct: 634 ENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLS 693
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 167 bits (423), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 128/180 (71%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGN 61
EAREN+AA LFSLS++DENKVTIG S IPPLV LL GT RGKKDA TALFNL + N
Sbjct: 477 EARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSAN 536
Query: 62 KGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGN 121
KG+A+ AG++ L+ LL + + GM+DEAL+IL +L+SHP+G+ AIG + LVEFI
Sbjct: 537 KGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQLSFIETLVEFIRQ 596
Query: 122 GSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLIDRMSR 181
G+P+NKE + +VL+ L S + ++ A + G+ L+E+ GT+R +RKA LI +S+
Sbjct: 597 GTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKANALIQLISK 656
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%)
Query: 19 ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMKLL 78
EN+V I ++GAIP LV LLS +++A T L NL I + NK G IP ++++L
Sbjct: 412 ENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEIL 471
Query: 79 TEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLVHLS 138
+ + + A L LS + K IG ++ +P LV+ + +G+ R K+++ L +LS
Sbjct: 472 ENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLS 531
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 118/175 (67%), Gaps = 1/175 (0%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGN 61
EA+ N+AATLFSLSV++E K IG +GAI PLV LL G+ GKKDAATALFNL I+ N
Sbjct: 520 EAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHEN 579
Query: 62 KGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGN 121
K K + AG + L++L+ +P+ GMV++A+ +LA L++ +GK AIG +P+LVE +
Sbjct: 580 KTKVIEAGAVRYLVELM-DPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVEL 638
Query: 122 GSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
GS R KEN+ A L+ L + ++ + G++ PL+ L + GT RGK KA L+
Sbjct: 639 GSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLL 693
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 19 ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMKLL 78
+N++ I AIP LV+LL +R + DA T L NL I NK +G I L+ +L
Sbjct: 454 DNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVL 513
Query: 79 TEPSGGMVDEA----LAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVL 134
G ++EA A L LS + K IG A A+ LV+ +G+GS K+++A L
Sbjct: 514 ---KTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATAL 570
Query: 135 VHLS 138
+LS
Sbjct: 571 FNLS 574
>AT3G01400.1 | Symbols: | ARM repeat superfamily protein |
chr3:151920-152987 FORWARD LENGTH=355
Length = 355
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 111/175 (63%)
Query: 3 ARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNK 62
A+ENAA L LS ++ENKV IG SGAIP LV LL G R KKDA+TAL++LC + NK
Sbjct: 162 AKENAACALLRLSQIEENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENK 221
Query: 63 GKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNG 122
+AV++G++ L++L+ + MVD++ ++++L S P+ K AI VP+LVE + G
Sbjct: 222 IRAVQSGIMKPLVELMADFGSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVG 281
Query: 123 SPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLID 177
+ R KE + ++L+ L Y + G + PL+ L+Q GT R K+KA LI+
Sbjct: 282 TQRQKEMAVSILLQLCEESVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIE 336
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 19 ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMKLL 78
EN++ I +GAI PL++L+S + ++ TA+ NL + NK +G I L++ L
Sbjct: 96 ENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAILNLSLCDENKESIASSGAIKPLVRAL 155
Query: 79 TEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLVHLS 138
+ + A L LS + K AIG + A+P+LV + G R K++++ L L
Sbjct: 156 KMGTPTAKENAACALLRLSQIEENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLC 215
Query: 139 SGDQQYLAQAHKLGLMTPLLEL-AQHGTD 166
S + + +A + G+M PL+EL A G++
Sbjct: 216 SAKENKI-RAVQSGIMKPLVELMADFGSN 243
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 140 bits (352), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 116/175 (66%), Gaps = 2/175 (1%)
Query: 3 ARENAAATLFSLSVVDENKVTIG-SSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGN 61
A+EN+AA+LFSLSV+ N+ IG S+ AI LV LL +GT RGKKDAA+ALFNL I N
Sbjct: 535 AKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDN 594
Query: 62 KGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGN 121
K + V+A + L++LL +P MVD+A+A+LA LS+ +G+ AI +P+LVE +
Sbjct: 595 KARIVQAKAVKYLVELL-DPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDL 653
Query: 122 GSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
GS R KEN+A+VL+ L ++ + G + PL+ L+Q GT R K KA QL+
Sbjct: 654 GSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLL 708
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 4/157 (2%)
Query: 7 AAATLFSLSVVD-ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKA 65
AAA + L++ EN+V IG GAI PL++LL + ++ A TAL NL I + NK
Sbjct: 456 AAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMI 515
Query: 66 VRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAAD-AVPILVEFIGNGSP 124
V G I L+ +L + + + A L LS + IG ++ A+ LV +G G+
Sbjct: 516 VEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTF 575
Query: 125 RNKENSAAVLVHLS--SGDQQYLAQAHKLGLMTPLLE 159
R K+++A+ L +LS ++ + QA + + LL+
Sbjct: 576 RGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLD 612
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 140 bits (352), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 116/175 (66%), Gaps = 2/175 (1%)
Query: 3 ARENAAATLFSLSVVDENKVTIG-SSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGN 61
A+EN+AA+LFSLSV+ N+ IG S+ AI LV LL +GT RGKKDAA+ALFNL I N
Sbjct: 571 AKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDN 630
Query: 62 KGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGN 121
K + V+A + L++LL +P MVD+A+A+LA LS+ +G+ AI +P+LVE +
Sbjct: 631 KARIVQAKAVKYLVELL-DPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDL 689
Query: 122 GSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
GS R KEN+A+VL+ L ++ + G + PL+ L+Q GT R K KA QL+
Sbjct: 690 GSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLL 744
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 4/157 (2%)
Query: 7 AAATLFSLSVVD-ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKA 65
AAA + L++ EN+V IG GAI PL++LL + ++ A TAL NL I + NK
Sbjct: 492 AAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMI 551
Query: 66 VRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAAD-AVPILVEFIGNGSP 124
V G I L+ +L + + + A L LS + IG ++ A+ LV +G G+
Sbjct: 552 VEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTF 611
Query: 125 RNKENSAAVLVHLS--SGDQQYLAQAHKLGLMTPLLE 159
R K+++A+ L +LS ++ + QA + + LL+
Sbjct: 612 RGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLD 648
>AT5G58680.1 | Symbols: | ARM repeat superfamily protein |
chr5:23708247-23709320 REVERSE LENGTH=357
Length = 357
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 106/175 (60%), Gaps = 1/175 (0%)
Query: 4 RENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKG 63
+ENAA L LS V+ENK+TIG SGAIP LV LL G R KKDA+TAL++LC NK
Sbjct: 161 KENAACALLRLSQVEENKITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKT 220
Query: 64 KAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGS 123
+AV +G++ L++L+ + MVD++ ++ +L S P+ K A+ VP+LVE + G+
Sbjct: 221 RAVESGIMKPLVELMIDFESDMVDKSAFVMNLLMSAPESKPAVVEEGGVPVLVEIVEAGT 280
Query: 124 PRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRG-KRKAAQLID 177
R KE S ++L+ L Y + G + PL+ L+Q RG K KA LI+
Sbjct: 281 QRQKEISVSILLQLCEESVVYRTMVAREGAVPPLVALSQGSASRGAKVKAEALIE 335
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 19 ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMKLL 78
EN++ + +GAI PLV+L+S + ++ TA+ NL + NK V +G + L+ L
Sbjct: 94 ENRIKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCDENKEMIVSSGAVKPLVNAL 153
Query: 79 TEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLVHLS 138
+ + A L LS + K IG + A+P+LV + NG R K++++ L L
Sbjct: 154 RLGTPTTKENAACALLRLSQVEENKITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLC 213
Query: 139 SGDQQYLAQAHKLGLMTPLLEL 160
S ++ +A + G+M PL+EL
Sbjct: 214 STNENK-TRAVESGIMKPLVEL 234
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
Query: 3 ARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNK 62
+++NAA L SL++++ENK +IG+ GAIPPLV+LL G+ RGKKDA T L+ LC Q NK
Sbjct: 282 SKQNAACALLSLALLEENKGSIGACGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNK 341
Query: 63 GKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNG 122
+AV AG + L+ L+ E GM ++A+ +L+ L++ DGK AI + LVE I +G
Sbjct: 342 ERAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSSLAAIDDGKEAIVEEGGIAALVEAIEDG 401
Query: 123 SPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHG--TDRGKRKAAQLI 176
S + KE + L+ L S + + G + PL+ L+Q G + R KRKA +L+
Sbjct: 402 SVKGKEFAILTLLQLCSDSVRNRGLLVREGAIPPLVGLSQSGSVSVRAKRKAERLL 457
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Query: 19 ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMKLL 78
+N+V IG SGAI L+ LL ++ A TAL NL ++ NK G I +L+ +L
Sbjct: 216 DNRVLIGESGAIQALIPLLRCNDPWTQEHAVTALLNLSLHDQNKAVIAAGGAIKSLVWVL 275
Query: 79 TEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLVHLS 138
+ A L L+ + K +IGA A+P LV + NGS R K+++ L L
Sbjct: 276 KTGTETSKQNAACALLSLALLEENKGSIGACGAIPPLVSLLLNGSCRGKKDALTTLYKLC 335
Query: 139 SGDQQYLAQAHKLGLMTPLLEL-AQHGT 165
+ QQ +A G + PL++L A+ GT
Sbjct: 336 TL-QQNKERAVTAGAVKPLVDLVAEEGT 362
>AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2355636-2356613 FORWARD LENGTH=325
Length = 325
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 14/185 (7%)
Query: 4 RENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKG 63
R NAAA +F+LS +D NKV IG SG + PL+ LL EG KD A A+F LCI N+
Sbjct: 140 RSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRS 199
Query: 64 KAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNG- 122
+AVR G + L K ++ +G VDE LAILA+L +H +G V L++
Sbjct: 200 RAVRDGAVRVLGKKIS--NGLYVDELLAILAMLVTHWKAVEELGELGGVSWLLKITRESE 257
Query: 123 SPRNKENSAAVLVHLSSGDQQYLAQ------AHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
RNKEN+ +L + D+ + AH G +T +L++ GT R +RKA ++
Sbjct: 258 CKRNKENAIVILHTICFSDRTKWKEIKEEENAH--GTIT---KLSREGTSRAQRKANGIL 312
Query: 177 DRMSR 181
DR+ +
Sbjct: 313 DRLRK 317
>AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2355636-2356613 FORWARD LENGTH=325
Length = 325
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 14/185 (7%)
Query: 4 RENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKG 63
R NAAA +F+LS +D NKV IG SG + PL+ LL EG KD A A+F LCI N+
Sbjct: 140 RSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRS 199
Query: 64 KAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNG- 122
+AVR G + L K ++ +G VDE LAILA+L +H +G V L++
Sbjct: 200 RAVRDGAVRVLGKKIS--NGLYVDELLAILAMLVTHWKAVEELGELGGVSWLLKITRESE 257
Query: 123 SPRNKENSAAVLVHLSSGDQQYLAQ------AHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
RNKEN+ +L + D+ + AH G +T +L++ GT R +RKA ++
Sbjct: 258 CKRNKENAIVILHTICFSDRTKWKEIKEEENAH--GTIT---KLSREGTSRAQRKANGIL 312
Query: 177 DRMSR 181
DR+ +
Sbjct: 313 DRLRK 317
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 14/185 (7%)
Query: 4 RENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKG 63
R NAAA +F+LS +D NKV IG SG + PL+ LL EG KD A A+F LCI N+
Sbjct: 275 RSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRS 334
Query: 64 KAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNG- 122
+AVR G + L K ++ +G VDE LAILA+L +H +G V L++
Sbjct: 335 RAVRDGAVRVLGKKIS--NGLYVDELLAILAMLVTHWKAVEELGELGGVSWLLKITRESE 392
Query: 123 SPRNKENSAAVLVHLSSGDQQYLAQ------AHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
RNKEN+ +L + D+ + AH G +T +L++ GT R +RKA ++
Sbjct: 393 CKRNKENAIVILHTICFSDRTKWKEIKEEENAH--GTIT---KLSREGTSRAQRKANGIL 447
Query: 177 DRMSR 181
DR+ +
Sbjct: 448 DRLRK 452
>AT5G62560.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:25110073-25111752 FORWARD
LENGTH=559
Length = 559
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 109/180 (60%), Gaps = 7/180 (3%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSSGAIPPLV-TLLSEGTQRGKKDAATALFNLCIYQG 60
EA+E+ A LFSL++ DENK+ IG GA+ PL+ L S ++R ++DAA AL++L +
Sbjct: 332 EAQEHVAGALFSLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPS 391
Query: 61 NKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILV---- 116
N+ + VRAG +PTL+ ++ SG L +L L++ PDGK A+ +AV ILV
Sbjct: 392 NRTRLVRAGAVPTLLSMVR--SGDSTSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLR 449
Query: 117 EFIGNGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
E G S +EN AVL+ L G+ ++ A + G L+E+ ++G +R K KA++++
Sbjct: 450 EVGGGDSEAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKIL 509
>AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 |
chr5:26048173-26049843 REVERSE LENGTH=556
Length = 556
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 104/189 (55%), Gaps = 13/189 (6%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSSGAIPPLV-TLLSEGTQRGKKDAATALFNLCIYQG 60
EA+E+AA T+FSLS+ D+NK+ IG GA+ PL+ L + + R + D+A AL++L + Q
Sbjct: 322 EAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQT 381
Query: 61 NKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILV---- 116
N+ K VR G +P L ++ SG AL ++ L+ +G++A+ A+AV ILV
Sbjct: 382 NRSKLVRLGAVPALFSMVR--SGESASRALLVICNLACCSEGRSAMLDANAVAILVGKLR 439
Query: 117 -EFI-----GNGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKR 170
E+ S +EN A L LS ++ A + + L E+ + GT+R +
Sbjct: 440 EEWTEEPTEARSSSSARENCVAALFALSHESLRFKGLAKEARAVEVLKEVEERGTERARE 499
Query: 171 KAAQLIDRM 179
KA +++ M
Sbjct: 500 KAKKILQLM 508
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 103/192 (53%), Gaps = 18/192 (9%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGN 61
E R NAAATL SLS +D NK+ IG+S A+ L+ L+ EG K+A + +FNLCI N
Sbjct: 267 ETRRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLEN 326
Query: 62 KGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIG- 120
KGK V AG+I K + +G VDE L++LA++S+H A+ D + + +
Sbjct: 327 KGKVVSAGLIHAATKKI--KAGSNVDELLSLLALISTH---NRAVEEMDKLGFIYDLFSI 381
Query: 121 ---NGSPRNKENSAAVLVHL--SSGDQQYLA----QAHKLGLMTPLLELAQHGTDRGKRK 171
S EN+ ++ ++ + D+ L + ++ G T +LA+ G+ R RK
Sbjct: 382 LRKPSSLLTGENAVVIVFNMYDRNRDRSRLKVVGEEENQHGTFT---KLAKQGSVRAARK 438
Query: 172 AAQLIDRMSRFL 183
A ++ + RF+
Sbjct: 439 AQGILQWIKRFV 450
>AT5G40140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:16057347-16058999 FORWARD
LENGTH=550
Length = 550
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 102/181 (56%), Gaps = 6/181 (3%)
Query: 1 MEARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQG 60
+EA+E++A +FSL++ DENK IG G + PL+ L+ GT+ + D+A AL++L + Q
Sbjct: 325 VEAQEHSAGVIFSLALEDENKTAIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQS 384
Query: 61 NKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIG 120
N+GK V+ G + L+ +++ G M+ L IL ++S P + A+ + V +V +
Sbjct: 385 NRGKLVKLGAVQMLLGMVS--LGQMIGRVLLILCNMASCPVSRPALLDSGGVECMVGVLR 442
Query: 121 NGSPRN---KENSAAVLVHLS-SGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
N +E+ AVL LS G ++ A + L+++ + G +R K+KA +++
Sbjct: 443 RDREVNESTRESCVAVLYGLSHDGGLRFKGLAMAANAVEELVKVERSGRERAKQKARRVL 502
Query: 177 D 177
+
Sbjct: 503 E 503
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 5 ENAAATLFSLSVVDEN-KVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKG 63
E A ++ ++ +DE+ ++++ ++ I L +L+ + + L NL + + NK
Sbjct: 246 EEALISIRRITRIDESSRISLCTTRVISALKSLIVSRYATVQVNVTAVLVNLSLEKSNKV 305
Query: 64 KAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGS 123
K VR+G++P L+ +L S + + ++ L+ + K AIG + L+ I G+
Sbjct: 306 KIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENKTAIGVLGGLEPLLHLIRVGT 365
Query: 124 PRNKENSAAVLVHLS 138
+ +SA L HLS
Sbjct: 366 ELTRHDSALALYHLS 380
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 1 MEARENAAATLFSLSVVDENKVTIG-SSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQ 59
+EA+ENAAATLFSLS V E K I + L LL GT RGKKDA TAL+NL +
Sbjct: 505 VEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHP 564
Query: 60 GNKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAAD-AVPILVEF 118
N + + G + +L+ L G+ +EA LA+L G AIG D AV L+
Sbjct: 565 DNCSRMIEGGGVSSLVGALKNE--GVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGM 622
Query: 119 IGNGSPRNKENSAAVLVHLS-SGDQQYLAQAHKLGLMTPLLE-LAQHGTDRGKRKAAQLI 176
+ G+PR KEN+ A L+ L SG + + + LL+ L GT R +RKAA L
Sbjct: 623 MRCGTPRGKENAVAALLELCRSGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLA 682
Query: 177 DRMSR 181
R
Sbjct: 683 RVFQR 687
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 19 ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAG-VIPTLMKL 77
EN+ I +GAIP L LL+ ++++ TA+ NL IY+ NK + + G + +++ +
Sbjct: 439 ENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSV 498
Query: 78 LTEPSGGMV---DEALAILAILSSHPDGKAAIGAAD-AVPILVEFIGNGSPRNKENSAAV 133
L SG V + A A L LS+ + K I D V L + NG+PR K+++
Sbjct: 499 LV--SGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTA 556
Query: 134 LVHLSS 139
L +LS+
Sbjct: 557 LYNLST 562
>AT4G31890.2 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 14/185 (7%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSE----GTQRGKKDAATALFNLCI 57
E E A LS +D NK IGSSGAI LV L + + ++DA AL+NL I
Sbjct: 246 EIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVKTLQNLDETSSSQAREDALRALYNLSI 305
Query: 58 YQGNKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIG-AADAVPILV 116
YQ N + +I L+ L + + + LAIL+ L + P+G+ AIG DA P+LV
Sbjct: 306 YQPNVSFILETDLITYLLNTLGDME--VSERILAILSNLVAVPEGRKAIGLVCDAFPVLV 363
Query: 117 EFIG-NGSPRNKENSAAVLV---HLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKA 172
+ + SP +E + +L+ H GD+Q + +A G+ + LLEL G+ +++A
Sbjct: 364 DVLNWTDSPGCQEKATYILMLMAHKGYGDRQVMIEA---GIESALLELTLLGSALAQKRA 420
Query: 173 AQLID 177
+++++
Sbjct: 421 SRILE 425
>AT4G31890.1 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 14/185 (7%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSE----GTQRGKKDAATALFNLCI 57
E E A LS +D NK IGSSGAI LV L + + ++DA AL+NL I
Sbjct: 246 EIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVKTLQNLDETSSSQAREDALRALYNLSI 305
Query: 58 YQGNKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIG-AADAVPILV 116
YQ N + +I L+ L + + + LAIL+ L + P+G+ AIG DA P+LV
Sbjct: 306 YQPNVSFILETDLITYLLNTLGDME--VSERILAILSNLVAVPEGRKAIGLVCDAFPVLV 363
Query: 117 EFIG-NGSPRNKENSAAVLV---HLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKA 172
+ + SP +E + +L+ H GD+Q + +A G+ + LLEL G+ +++A
Sbjct: 364 DVLNWTDSPGCQEKATYILMLMAHKGYGDRQVMIEA---GIESALLELTLLGSALAQKRA 420
Query: 173 AQLID 177
+++++
Sbjct: 421 SRILE 425
>AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 |
chr3:17644434-17645963 FORWARD LENGTH=509
Length = 509
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 109/187 (58%), Gaps = 12/187 (6%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSSGAIPPLV-TLLSEGTQRGKKDAATALFNLCIYQG 60
EA+E+ LFSL+V +ENK+ IG GA+ PL+ L S ++R ++DAA AL++L +
Sbjct: 281 EAQEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPN 340
Query: 61 NKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILV-EFI 119
N+ + V+AG +P ++ ++ SG L +L L++ +GK A+ +AV ILV +
Sbjct: 341 NRSRLVKAGAVPMMLSMIR--SGESASRILLLLCNLAACSEGKGAMLDGNAVSILVGKLR 398
Query: 120 GNGSPRN----KENSAAVLVHLSSGDQQYLAQAHKLG---LMTPLLELAQHGTDRGKRKA 172
+G + +EN L+ LS G+ ++ A + G ++T ++E ++ G+ R K KA
Sbjct: 399 ESGGAESDAAARENCVGALLTLSVGNMRFRGLASEAGAEEILTEIVE-SESGSGRLKEKA 457
Query: 173 AQLIDRM 179
++++ +
Sbjct: 458 SKILQTL 464
>AT2G25130.1 | Symbols: | ARM repeat superfamily protein |
chr2:10695243-10696959 REVERSE LENGTH=468
Length = 468
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 97/182 (53%), Gaps = 14/182 (7%)
Query: 5 ENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSE----GTQRGKKDAATALFNLCIYQG 60
E A LS +D NK IGSSGAI LV L + + ++DA AL+NL IY
Sbjct: 216 EAIVANFLGLSALDSNKPIIGSSGAIIFLVKTLKNFEETSSSQAREDALRALYNLSIYHQ 275
Query: 61 NKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIG-AADAVPILVEFI 119
N + +IP L+ L + + + LAIL + S P+G+ AIG +A PILV+ +
Sbjct: 276 NVSFILETDLIPFLLNTLGDME--VSERILAILTNVVSVPEGRKAIGEVVEAFPILVDVL 333
Query: 120 G-NGSPRNKENSAAVLV---HLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQL 175
N S + +E + +L+ H GD+ + +A G+ + LLEL G+ +++A+++
Sbjct: 334 NWNDSIKCQEKAVYILMLMAHKGYGDRNAMIEA---GIESSLLELTLVGSPLAQKRASRV 390
Query: 176 ID 177
++
Sbjct: 391 LE 392
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 19 ENKVTIGSSGAIPPLVTLLSEGTQRGKKDAAT--ALFNLCIYQG-NKGKAVRAGVIPTLM 75
E +VT+ GAIPPLV+++ + +Q A+ AL NL I NK V+AGV+ ++
Sbjct: 142 EARVTLAMLGAIPPLVSMIDDESQSEDALIASLYALLNLGIGNDVNKAAIVKAGVVHKML 201
Query: 76 KLLTE---PSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGN----GSPRNKE 128
KL+ P+ + + +A LS+ K IG++ A+ LV+ + N S + +E
Sbjct: 202 KLVESSKPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLVKTLKNFEETSSSQARE 261
Query: 129 NSAAVLVHLSSGDQ 142
++ L +LS Q
Sbjct: 262 DALRALYNLSIYHQ 275
>AT4G12710.1 | Symbols: | ARM repeat superfamily protein |
chr4:7485040-7486733 REVERSE LENGTH=402
Length = 402
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 5/179 (2%)
Query: 4 RENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKG 63
RE A A + +LS NK I SSG P L+ +LS GT +GK DA TAL NL +
Sbjct: 149 RELATAAILTLSAAPANKAMIISSGVPPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSA 208
Query: 64 KAVRAGVIPTLMKLLTE--PSGGMVDEALAILAILSSHP-DGKAAIGAA-DAVPILVEFI 119
+ A + L+ LL E ++A A++ ++ SH DG+ AI + D + LVE +
Sbjct: 209 PILDAKAVYPLIHLLKECKKHSKFAEKATALVEMILSHSEDGRNAITSCEDGILTLVETV 268
Query: 120 GNGSPRNKENSAAVLVHLSSGDQ-QYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLID 177
+GSP + E++ L+ L D+ +Y K G + LL GT + + +A L+D
Sbjct: 269 EDGSPLSIEHAVGALLSLCRSDRDKYRKLILKEGAIPGLLSSTVDGTSKSRDRARVLLD 327
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 24 IGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIY-QGNKGKAVRAGVIPTLMKLLTEPS 82
+ +G IPPLV +L + + AL NL + + NK + V+AG +P L+++L +
Sbjct: 86 LADAGVIPPLVPMLFSSNVDARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHN 145
Query: 83 GGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLVHLSSGDQ 142
+ + A A + LS+ P KA I ++ P+L++ + +G+ + K ++ L +LS+ +
Sbjct: 146 ASLRELATAAILTLSAAPANKAMIISSGVPPLLIQMLSSGTVQGKVDAVTALHNLSAC-K 204
Query: 143 QYLAQAHKLGLMTPLLELAQHGTDRGK--RKAAQLID 177
+Y A + PL+ L + K KA L++
Sbjct: 205 EYSAPILDAKAVYPLIHLLKECKKHSKFAEKATALVE 241
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 96/178 (53%), Gaps = 3/178 (1%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQ-RGKKDAATALFNLCIYQG 60
E+ +A A +LS +DE K IGSS A+P LV LL + + + K DA AL+NL Y
Sbjct: 525 ESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSP 584
Query: 61 NKGKAVRAGVIPTLMKLLTEPSGGM-VDEALAILAILSSHPDGK-AAIGAADAVPILVEF 118
N + + +I +L LL + ++++LA+L L+S +GK A+ + + L
Sbjct: 585 NIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATV 644
Query: 119 IGNGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
+ G +E + + L+ L +G + + + G++ L+ ++ +GT RG+ K+ +L+
Sbjct: 645 LDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLL 702
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 96/178 (53%), Gaps = 3/178 (1%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQ-RGKKDAATALFNLCIYQG 60
E+ +A A +LS +DE K IGSS A+P LV LL + + + K DA AL+NL Y
Sbjct: 525 ESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSP 584
Query: 61 NKGKAVRAGVIPTLMKLLTEPSGGM-VDEALAILAILSSHPDGK-AAIGAADAVPILVEF 118
N + + +I +L LL + ++++LA+L L+S +GK A+ + + L
Sbjct: 585 NIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATV 644
Query: 119 IGNGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
+ G +E + + L+ L +G + + + G++ L+ ++ +GT RG+ K+ +L+
Sbjct: 645 LDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLL 702
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 7 AAATLFSLSVVDENKVTIGSS-GAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKA 65
AA L SL+VV+ NK TIGS AI LV+LL G R +K++ATAL+ LC + N+ +
Sbjct: 197 AATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRERKESATALYALCSFPDNRKRV 256
Query: 66 VRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADA-VPILVEFIGNGSP 124
V G +P +L E + ++ A+ +L +L G+ + V +LV + NG+
Sbjct: 257 VDCGSVP----ILVEAADSGLERAVEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNGNL 312
Query: 125 RNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
+ + S +L L + + + + G++ + +++ +R A L+
Sbjct: 313 KGIQYSLFILNCLCCCSGEIVDEVKREGVVEICFGFEDNESEKIRRNATILV 364
>AT1G77460.2 | Symbols: | Armadillo/beta-catenin-like repeat ; C2
calcium/lipid-binding domain (CaLB) protein |
chr1:29104378-29111580 FORWARD LENGTH=2136
Length = 2136
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 43/206 (20%)
Query: 17 VDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAV-RAGVIP--- 72
VD++K + ++G IPPLV LL G+Q+ K+DAA L+NLC + V RAG IP
Sbjct: 502 VDDSKWAVTAAGGIPPLVQLLETGSQKAKEDAACILWNLCCHSEEIRDCVERAGGIPAFL 561
Query: 73 ----------------TLMKLLTEPSGGMVDEALAILAILSSHPDGKAAI---------- 106
TL+KL+ +++ LA+L L P K +
Sbjct: 562 WLLKTGGPNSQETSAKTLVKLVHTADPATINQLLALL--LGDDPTSKIQVIEVLGHVLSK 619
Query: 107 -----------GAADAVPILVEFIGNGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMT 155
A + LVE + + KE++A+VL L S Q ++
Sbjct: 620 ASQEDLVHRGCAANKGLRSLVESLTSSREETKEHTASVLADLFSSRQDICGHLATDDIIN 679
Query: 156 PLLELAQHGTDRGKRKAAQLIDRMSR 181
P ++L + T ++ A+ +D +SR
Sbjct: 680 PWIKLLTNNTQNVAKQVARALDALSR 705
>AT1G77460.1 | Symbols: | Armadillo/beta-catenin-like repeat ; C2
calcium/lipid-binding domain (CaLB) protein |
chr1:29104378-29111580 FORWARD LENGTH=2136
Length = 2136
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 43/206 (20%)
Query: 17 VDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAV-RAGVIP--- 72
VD++K + ++G IPPLV LL G+Q+ K+DAA L+NLC + V RAG IP
Sbjct: 502 VDDSKWAVTAAGGIPPLVQLLETGSQKAKEDAACILWNLCCHSEEIRDCVERAGGIPAFL 561
Query: 73 ----------------TLMKLLTEPSGGMVDEALAILAILSSHPDGKAAI---------- 106
TL+KL+ +++ LA+L L P K +
Sbjct: 562 WLLKTGGPNSQETSAKTLVKLVHTADPATINQLLALL--LGDDPTSKIQVIEVLGHVLSK 619
Query: 107 -----------GAADAVPILVEFIGNGSPRNKENSAAVLVHLSSGDQQYLAQAHKLGLMT 155
A + LVE + + KE++A+VL L S Q ++
Sbjct: 620 ASQEDLVHRGCAANKGLRSLVESLTSSREETKEHTASVLADLFSSRQDICGHLATDDIIN 679
Query: 156 PLLELAQHGTDRGKRKAAQLIDRMSR 181
P ++L + T ++ A+ +D +SR
Sbjct: 680 PWIKLLTNNTQNVAKQVARALDALSR 705
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 7 AAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQ-RGKKDAATALFNLCIYQGNKGKA 65
A A +LS +++ K IGSS A+ V LL + T+ + K DA AL+NL Y N
Sbjct: 530 ATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTL 589
Query: 66 VRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAA-IGAADAVPILVEFIGNGSP 124
+ + +I +L L + + ++++LA+L L+S +GK I + L + G
Sbjct: 590 LSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDT 649
Query: 125 RNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
+E + + LV L +G + + + G++ L+ ++ +G+ RG+ K+ +L+
Sbjct: 650 VEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLL 701
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 102/191 (53%), Gaps = 10/191 (5%)
Query: 2 EARENAAATLFSLSVVDENKVTIGS-SGAIPPLVTLL--SEGTQRGKKDAATALFNLCIY 58
E+R+ AAA LF LS + + IG S AIP LV ++ + K++A A+ +L +
Sbjct: 475 ESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIRSLLMN 534
Query: 59 Q-GNKGKAVRAGVIPTLMKLLT--EPSGGMVDEALAILAILSSHPDGKAAIGAADAVPIL 115
Q N + + AG++P L+ L+ E S G+ +++AILA ++ +PDG ++ + +
Sbjct: 535 QPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAKMAEYPDGMISVLRRGGLKLA 594
Query: 116 VEFIGNG--SPRNKENSAAVLVHL--SSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRK 171
V+ +G+ SP K++ A+L++L + G + A +M L + +G G +K
Sbjct: 595 VKILGSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNPSIMGSLYTASSNGELGGGKK 654
Query: 172 AAQLIDRMSRF 182
A+ LI + F
Sbjct: 655 ASALIKMIHEF 665
>AT3G03440.1 | Symbols: | ARM repeat superfamily protein |
chr3:815709-818568 FORWARD LENGTH=408
Length = 408
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 4 RENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKG 63
+E A+A+L +LS NK IG++G +P LV ++ G+ + K DA AL NL N
Sbjct: 164 QEYASASLLTLSASANNKPIIGANGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNLS 223
Query: 64 KAVRAGVIPTLMKLLTEPSGGMVDEALA---ILAILSSHPDGKAAIGAAD-AVPILVEFI 119
+ + ++ LL I A++ S + + + + + V +VE +
Sbjct: 224 MILATKPLSPILNLLKSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVL 283
Query: 120 GNGSPRNKENSAAVLVHLSSGDQ-QYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
NGS + +E++ VL+ L D+ +Y + G++ LLEL GT + + KA +L+
Sbjct: 284 ENGSLQAREHAVGVLLTLCQSDRSKYREPILREGVIPGLLELTVQGTSKSRIKAQRLL 341
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 1 MEARENAAATLFSLSVVDENKVTIGSSG-AIPPLVTLLSEGTQRGKKDAATALFNLCIYQ 59
EA+ NAAATLFSL+ V + +G + LV L +G K+DA A+ NL +
Sbjct: 466 WEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALVAILNLVAER 525
Query: 60 GNKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADA-VPILVEF 118
N G+ V AGV+ E + E + G A+ AA + + +L E
Sbjct: 526 ENVGRFVEAGVMGAAGDAFQE-----LPEEAVAVVEAVVRRGGLMAVSAAFSLIRLLGEV 580
Query: 119 IGNGSPRNKENSAAVLVHLS-SGDQQYLAQAHKL-GLMTPLLELAQHGTDRGKRKAAQLI 176
+ G+ +E++AA LV + G + +A+ + G+ + E+ GT RG RKAA L+
Sbjct: 581 MREGADTTRESAAATLVTMCRKGGSELVAEMAAIPGIERVIWEMIGAGTARGGRKAASLM 640
Query: 177 DRMSRF 182
+ R+
Sbjct: 641 RYLRRW 646
>AT2G22125.1 | Symbols: CSI1 | binding | chr2:9406793-9414223
FORWARD LENGTH=2150
Length = 2150
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 41/137 (29%)
Query: 2 EARENAAATLFSLSVV-DENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQG 60
+ +E A A L LS DE+K I ++G IPPLV +L G+ + ++D+AT L NLC
Sbjct: 508 QQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAREDSATILRNLC---- 563
Query: 61 NKGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIG 120
N + +R A + +ADAVP L+ +
Sbjct: 564 NHSEDIR------------------------------------ACVESADAVPALLWLLK 587
Query: 121 NGSPRNKENSAAVLVHL 137
NGSP KE +A L HL
Sbjct: 588 NGSPNGKEIAAKTLNHL 604
>AT5G14510.1 | Symbols: | ARM repeat superfamily protein |
chr5:4678125-4679194 REVERSE LENGTH=327
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 1 MEARENAAATLFSLSVVDENKVTIGSSGAIPPLVTL--LSEGTQRGKKDAATALFNLCIY 58
M E A A L LS ++NKV + S+ + LV L L T + K D L NL
Sbjct: 96 MVVLELAMAFLLILSSCNKNKVKMASTRLVQLLVGLIGLDRLTIQAKVDGIATLQNLSTL 155
Query: 59 QGNKGKAVRAGVIPTLMKLL--TEPSGGMVDEALAILA-ILSSHPDGKAAIGAADAVPIL 115
+ +G L++++ + S + D+A+A+L I+S P+ ++IG A + +L
Sbjct: 156 HQIVPLVIASGAPYALLQVINFCDKSSELADKAVALLENIISHSPESVSSIGGA--IGVL 213
Query: 116 VEFIGNGSPRNKENSAAVLVHLSSGDQQY-LAQAHKLGLMTPLLELAQHGTDRGKRKAAQ 174
VE I GS + KE++ +L+ + + D++ + G+M LL+++ GT R K A +
Sbjct: 214 VEAIEEGSAQCKEHAVGILLGICNNDRETNRGMILREGVMPGLLQVSVDGTRRAKEMARE 273
Query: 175 LI 176
L+
Sbjct: 274 LL 275
>AT1G08315.1 | Symbols: | ARM repeat superfamily protein |
chr1:2620500-2621477 REVERSE LENGTH=325
Length = 325
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 99/190 (52%), Gaps = 16/190 (8%)
Query: 3 ARENAAATLFSLSVVDEN-KVTIGSS-GAIPPLVTLLS--EGTQRGKKDAATALFNLCIY 58
A +++AAT++SL + +E+ + IGS I L+ ++ + R KD+ ALF + +Y
Sbjct: 109 AVQSSAATIYSLLIAEESYRPIIGSKRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALY 168
Query: 59 QGNKGKAVRAGVIPTLMKLLTEPS-GGMVDEALAILAILS---SHPDGKAAIGAADAVPI 114
N+ + G IP L L+ + S G+V++A A++A ++ DG + A+ +
Sbjct: 169 PMNRSTMISLGAIPALFSLIVKDSRCGIVEDATAVMAQVAGCEDSEDGMRRVSGANVLAD 228
Query: 115 LVEFIGNGSPRNKENSAAVLVHLS--------SGDQQYLAQAHKLGLMTPLLELAQHGTD 166
L++ S R KENS L++L+ S +A G M ++ +A++G+
Sbjct: 229 LLDPCTGSSLRIKENSVGALLNLARCGGAAARSEVAAAVASGADEGAMEGIVYVAENGSL 288
Query: 167 RGKRKAAQLI 176
+G++KA L+
Sbjct: 289 KGRKKAVDLL 298
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 6 NAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQ-RGKKDAATALFNLCIYQGNKGK 64
+ A +LS ++E K IGSS A+P +V LL T+ + K DA +LF+L Y N
Sbjct: 527 SVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPC 586
Query: 65 AVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSHPDGK-AAIGAADAVPILVEFIGNGS 123
+ A ++ L L +++LA+L L + GK + A V L + G
Sbjct: 587 LLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGE 646
Query: 124 PRNKENSAAVLVHLSSGDQQYLAQAHKLGLMTPLLELAQHGTDRGKRKAAQLI 176
P +E + ++L+ L + + + G++ L+ ++ +GT RG+ +A +L+
Sbjct: 647 PNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLL 699
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 12/192 (6%)
Query: 2 EARENAAATLFSLSVVDENKVTIGSS-GAIPPLVTLLSEGTQRG---KKDAATALFNLCI 57
E R +A+ LF LS V++ IG + AIP L+ ++ +G G K+ A A+ L +
Sbjct: 486 ETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIV-KGDDYGDSAKRSALLAVMGLLM 544
Query: 58 YQGNKGKAVRAGVIPTLMKLLT--EPSGGMVDEALAILAILSSHPDGKAAIGAADAVPIL 115
N + + AG +P L+ LL E SGG+ + LA LA L+ +PDG + + +
Sbjct: 545 QSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGLKLA 604
Query: 116 VEFIGNG--SPRN-KENSAAVLVHLS-SGDQQYLAQAHKLGL-MTPLLELAQHGTDRGKR 170
V+ + + SP K++ ++++L +G + + K L M L + +G G +
Sbjct: 605 VKILSSSEDSPVAVKQHCVGLILNLCLNGGRDVVGVLVKNSLVMGSLYTVLSNGEYGGSK 664
Query: 171 KAAQLIDRMSRF 182
KA+ LI + F
Sbjct: 665 KASALIRMIHEF 676
>AT2G44900.1 | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 |
chr2:18511719-18515762 REVERSE LENGTH=930
Length = 930
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%)
Query: 4 RENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKG 63
+E AA L+ LSV + N V IG G +PPL+ L + + AA AL+NL GN
Sbjct: 671 QERAAGALWGLSVSEANSVAIGREGGVPPLIALARSEAEDVHETAAGALWNLAFNPGNAL 730
Query: 64 KAVRAGVIPTLMKLLTEPSGGM 85
+ V G +P L+ L + M
Sbjct: 731 RIVEEGGVPALVHLCSSSVSKM 752
>AT3G60350.1 | Symbols: ARABIDILLO-2, ARABIDILLO2 | ARABIDILLO-2 |
chr3:22306806-22310596 REVERSE LENGTH=928
Length = 928
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 4 RENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKG 63
+E A L+ LSV + N + IG G IPPL+ L+ + + AA AL+NL GN
Sbjct: 662 QERVAGALWGLSVSEANSIAIGHEGGIPPLIALVRSEAEDVHETAAGALWNLSFNPGNAL 721
Query: 64 KAVRAGVIPTLMKLLTEPSGGMVD--EALAILAILSSHPDGKAAIGAA 109
+ V G + L++L + M ALA+ + D A IG +
Sbjct: 722 RIVEEGGVVALVQLCSSSVSKMARFMAALALAYMFDGRMDEYAMIGTS 769
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 3 ARENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNK 62
R ++AAT+ SLS D NK+ IG+S + L+ ++ EG +A +AL NLC +
Sbjct: 257 TRIHSAATVNSLSYTDSNKIIIGNSEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEIS 316
Query: 63 GKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSH 99
KAV G+I +K + +G V L++LA +S+
Sbjct: 317 EKAVSEGLIRAAIKKI--KAGSNVSMLLSLLAFVSTQ 351
>AT3G20170.1 | Symbols: | ARM repeat superfamily protein |
chr3:7041780-7043207 FORWARD LENGTH=475
Length = 475
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 14 LSVVDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPT 73
L+V + N V I LV +L G K A+ L++L Y+ + +G IP
Sbjct: 302 LAVAEGNAVLIAEQ-----LVRILRAGDNEAKLAASDVLWDLAGYRHSVSVIRGSGAIPL 356
Query: 74 LMKLLTEPSGGMVDEALAILAILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAV 133
L++LL + S + ++ LS + + + A + +PIL+E++G+ S ++N+A
Sbjct: 357 LIELLRDGSLEFRERISGAISQLSYNENDREAFSDSGMIPILIEWLGDESEELRDNAAEA 416
Query: 134 LVHLSSGDQQYLAQAHK 150
L++ S DQ++ A+ +
Sbjct: 417 LINFSE-DQEHYARVRE 432
>AT5G19330.1 | Symbols: ARIA | ARM repeat protein interacting with
ABF2 | chr5:6508095-6512701 REVERSE LENGTH=710
Length = 710
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Query: 21 KVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQ-GNKGKAVRAGVIPTLMKLLT 79
K + G IPPLV LL + ++ AA AL L NK + V +PTL+ +L
Sbjct: 191 KTRVRVEGGIPPLVELLEFSDSKVQRAAAGALRTLAFKNDDNKNQIVECNALPTLILMLG 250
Query: 80 EPSGGMVDEALAILA-ILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLVHLS 138
+ EA+ ++ ++ S P K + A A+ ++ + + P ++ +A +L +
Sbjct: 251 SEDAAIHYEAVGVIGNLVHSSPHIKKEVLTAGALQPVIGLLSSCCPESQREAALLLGQFA 310
Query: 139 SGDQQYLAQAHKLGLMTPLLELAQ 162
S D + G + PL+E+ Q
Sbjct: 311 STDSDCKVHIVQRGAVRPLIEMLQ 334
>AT5G19330.2 | Symbols: ARIA | ARM repeat protein interacting with
ABF2 | chr5:6508300-6512701 REVERSE LENGTH=636
Length = 636
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Query: 21 KVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQ-GNKGKAVRAGVIPTLMKLLT 79
K + G IPPLV LL + ++ AA AL L NK + V +PTL+ +L
Sbjct: 192 KTRVRVEGGIPPLVELLEFSDSKVQRAAAGALRTLAFKNDDNKNQIVECNALPTLILMLG 251
Query: 80 EPSGGMVDEALAILA-ILSSHPDGKAAIGAADAVPILVEFIGNGSPRNKENSAAVLVHLS 138
+ EA+ ++ ++ S P K + A A+ ++ + + P ++ +A +L +
Sbjct: 252 SEDAAIHYEAVGVIGNLVHSSPHIKKEVLTAGALQPVIGLLSSCCPESQREAALLLGQFA 311
Query: 139 SGDQQYLAQAHKLGLMTPLLELAQ 162
S D + G + PL+E+ Q
Sbjct: 312 STDSDCKVHIVQRGAVRPLIEMLQ 335
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 4 RENAAATLFSLSVVDENKVTIGSSGAIPPLVTLLSE-GTQRGKKDAATALFNLCI-YQGN 61
R NA TL SLS +D NK+ IG+S A+ L+ L+ E DA A+ +LC + N
Sbjct: 275 RRNATLTLASLSDIDSNKIIIGNSVALKALIDLIGELDDLSATHDALCAVIDLCCDEREN 334
Query: 62 KGKAVRAGVIPTLMKLLTEPSGGMVDEALAILAILSSH 99
KA+ G+ P +K + E+LA LA++S H
Sbjct: 335 WKKAISLGLAPAAIKNIKARRNLF--ESLAALALISPH 370
>AT1G44120.1 | Symbols: | Armadillo/beta-catenin-like repeat ; C2
calcium/lipid-binding domain (CaLB) protein |
chr1:16780610-16787414 FORWARD LENGTH=2114
Length = 2114
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 44/166 (26%)
Query: 17 VDENKVTIGSSGAIPPLVTLLSEG-TQRGKKDAATALFNLCIYQGNKGKAV-RAGVIP-- 72
V+E++ + S+G IPPL+ +L G +Q+ K DA + NLC + V +AG IP
Sbjct: 478 VEESRWAVTSAGGIPPLLQILETGVSQKAKDDAVRVILNLCCHSEEIRLCVEKAGAIPAL 537
Query: 73 -----------------TLMKLLTEPSGGMVDEALAILAILSSHPDGKA----AIGAADA 111
TL+KL+ ++++ A+ L P K +G A
Sbjct: 538 LGLLKNGGPKSQESSANTLLKLIKTADPSVIEQVQALF--LGDAPKSKTHLIRVLGHVLA 595
Query: 112 VPILVEFIGNGSPRN-----------------KENSAAVLVHLSSG 140
L EF+ GS N KEN+A+VL L S
Sbjct: 596 SASLEEFVTKGSAANNGLRSLVQRLASSNEKMKENAASVLADLFSS 641