Miyakogusa Predicted Gene
- Lj3g3v3188580.4
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3188580.4 Non Chatacterized Hit- tr|I1KJX5|I1KJX5_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,63.24,6e-19,no
description,Homeodomain-like; Homeobox,Homeodomain;
Homeodomain-like,Homeodomain-like; Homeodomai,CUFF.45407.4
(260 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G59340.1 | Symbols: WOX2 | WUSCHEL related homeobox 2 | chr5:... 147 6e-36
AT3G18010.1 | Symbols: WOX1 | WUSCHEL related homeobox 1 | chr3:... 105 3e-23
AT2G28610.1 | Symbols: PRS, WOX3, PRS1 | Homeodomain-like superf... 99 3e-21
AT1G46480.1 | Symbols: WOX4 | WUSCHEL related homeobox 4 | chr1:... 97 8e-21
AT2G01500.1 | Symbols: PFS2, WOX6, HOS9 | Homeodomain-like super... 95 4e-20
AT2G17950.1 | Symbols: WUS, PGA6, WUS1 | Homeodomain-like superf... 94 8e-20
AT5G05770.1 | Symbols: WOX7 | WUSCHEL related homeobox 7 | chr5:... 91 6e-19
AT3G11260.1 | Symbols: WOX5 | WUSCHEL related homeobox 5 | chr3:... 91 7e-19
AT5G45980.1 | Symbols: WOX8, STPL | WUSCHEL related homeobox 8 |... 77 9e-15
AT1G20700.1 | Symbols: WOX14, ATWOX14 | WUSCHEL related homeobox... 71 9e-13
AT2G33880.1 | Symbols: WOX9, HB-3, STIP | homeobox-3 | chr2:1434... 69 3e-12
AT4G35550.1 | Symbols: HB-4, WOX13, ATWOX13 | WUSCHEL related ho... 68 5e-12
AT1G20710.1 | Symbols: WOX10 | WUSCHEL related homeobox 10 | chr... 60 1e-09
AT3G03660.2 | Symbols: WOX11 | WUSCHEL related homeobox 11 | chr... 57 2e-08
AT3G03660.1 | Symbols: WOX11 | WUSCHEL related homeobox 11 | chr... 57 2e-08
AT5G17810.2 | Symbols: WOX12 | WUSCHEL related homeobox 12 | chr... 54 1e-07
AT5G17810.1 | Symbols: WOX12 | WUSCHEL related homeobox 12 | chr... 54 1e-07
>AT5G59340.1 | Symbols: WOX2 | WUSCHEL related homeobox 2 |
chr5:23933408-23934627 REVERSE LENGTH=260
Length = 260
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 122/249 (48%), Gaps = 36/249 (14%)
Query: 30 AASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKAR 89
A+SSRWNPTK+QITLLE+LYK+GI+TP+A++IQQIT RLR +GHIEGKNVFYWFQNHKAR
Sbjct: 10 ASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKAR 69
Query: 90 QRQKQKQETIAYFNRFLHRXXXXXXXXXXXXNALCGPYCMPQP-----NSEIGFYPQQY- 143
QRQKQKQE +AYFNR LH+ PY + Q N Y
Sbjct: 70 QRQKQKQERMAYFNRLLHKTSRFFYPPPCSNVGCVSPYYLQQASDHHMNQHGSVYTNDLL 129
Query: 144 --SKVLLPV-GYRNHHVEK--------------VVPNGMSSVYNSQLVYDVNMQQRISDH 186
+ V++P GY V + +P SS+ + N D
Sbjct: 130 HRNNVMIPSGGYEKRTVTQHQKQLSDIRTTAATRMPISPSSLRFDRFALRDNCYAG-EDI 188
Query: 187 NIHFNNQETLDLFPLHPTGILEGKTTRTXXXXXXXXXXXXXXXXXXXXXPDINEEDGCPE 246
N++ + ++TL LFPL P + P DG
Sbjct: 189 NVNSSGRKTLPLFPLQPLNASNADGMGS------------SSFALGSDSPVDCSSDGAGR 236
Query: 247 NQPFFDFFN 255
QPF DFF+
Sbjct: 237 EQPFIDFFS 245
>AT3G18010.1 | Symbols: WOX1 | WUSCHEL related homeobox 1 |
chr3:6161155-6163183 REVERSE LENGTH=350
Length = 350
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 60/69 (86%)
Query: 29 IAASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKA 88
+ SSRWNPT +Q+ +LE LY+QG +TP+A+ IQQITA+LR +G IEGKNVFYWFQNHKA
Sbjct: 71 VMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKA 130
Query: 89 RQRQKQKQE 97
R+RQK++++
Sbjct: 131 RERQKRRRQ 139
>AT2G28610.1 | Symbols: PRS, WOX3, PRS1 | Homeodomain-like
superfamily protein | chr2:12262115-12263286 FORWARD
LENGTH=244
Length = 244
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 54/68 (79%)
Query: 30 AASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKAR 89
AS+RW PT EQ+ +LE +Y+ GI+TP A +IQQITA L +G IEGKNVFYWFQNHKAR
Sbjct: 4 VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKAR 63
Query: 90 QRQKQKQE 97
RQK +++
Sbjct: 64 DRQKLRKK 71
>AT1G46480.1 | Symbols: WOX4 | WUSCHEL related homeobox 4 |
chr1:17236903-17237953 REVERSE LENGTH=251
Length = 251
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 56/69 (81%)
Query: 31 ASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQ 90
+RWNPT+EQI +LE LYK G++TP A++I+ IT +L +G IEGKNVFYWFQNHKAR+
Sbjct: 87 GGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARE 146
Query: 91 RQKQKQETI 99
RQKQK+ +
Sbjct: 147 RQKQKRNNL 155
>AT2G01500.1 | Symbols: PFS2, WOX6, HOS9 | Homeodomain-like
superfamily protein | chr2:224470-225997 REVERSE
LENGTH=271
Length = 271
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 49/59 (83%)
Query: 30 AASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKA 88
AA+ RWNPT EQIT LE LY+ G +TPT E+IQQI ++LR +G IEGKNVFYWFQNHKA
Sbjct: 57 AATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKA 115
>AT2G17950.1 | Symbols: WUS, PGA6, WUS1 | Homeodomain-like
superfamily protein | chr2:7809100-7810671 REVERSE
LENGTH=292
Length = 292
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 32 SSRWNPTKEQITLLESLY-KQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQ 90
S+RW PT EQI +L+ LY I++PTA++IQ+ITARLR G IEGKNVFYWFQNHKAR+
Sbjct: 36 STRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARE 95
Query: 91 RQKQK 95
RQK++
Sbjct: 96 RQKKR 100
>AT5G05770.1 | Symbols: WOX7 | WUSCHEL related homeobox 7 |
chr5:1734487-1734855 FORWARD LENGTH=122
Length = 122
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%)
Query: 30 AASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKAR 89
A RWNPT EQ+ LL L+K G++TP+ ++IQ+I+ L +G IE KNVFYWFQNHKAR
Sbjct: 25 AKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKAR 84
Query: 90 QRQKQKQETIAYFN 103
+RQK ++ + F+
Sbjct: 85 ERQKCRKISTVKFD 98
>AT3G11260.1 | Symbols: WOX5 | WUSCHEL related homeobox 5 |
chr3:3527606-3528263 FORWARD LENGTH=182
Length = 182
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 54/68 (79%)
Query: 34 RWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQRQK 93
RWNPT EQ+ +L L++ G++TPT ++IQ+I+ L +G IE KNVFYWFQNHKAR+RQK
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83
Query: 94 QKQETIAY 101
+++ +I +
Sbjct: 84 RRKISIDF 91
>AT5G45980.1 | Symbols: WOX8, STPL | WUSCHEL related homeobox 8 |
chr5:18648921-18650698 FORWARD LENGTH=325
Length = 325
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 34 RWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQRQK 93
RWNP EQI +LES++ G P EEIQ+I RL+ +G I NVFYWFQN K+R + K
Sbjct: 55 RWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAKHK 114
Query: 94 QKQETIAYFNRFLHRXXXXXXXXXXXXNALCGPYCMPQPNSEIGFYPQQYSKVLL--PVG 151
R H+ + +C N E G YP Q +++++ P G
Sbjct: 115 L---------RVHHKSPKMSKKDKTVIPSTDADHCFGFVNQETGLYPVQNNELVVTEPAG 165
Query: 152 Y 152
+
Sbjct: 166 F 166
>AT1G20700.1 | Symbols: WOX14, ATWOX14 | WUSCHEL related homeobox 14
| chr1:7182558-7183866 FORWARD LENGTH=211
Length = 211
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 29 IAASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKA 88
I+ RW PT Q+ +LES+Y +G TP I++I L HG I NV+ WFQN +A
Sbjct: 90 ISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRA 149
Query: 89 RQRQKQKQETIA 100
R ++KQ Q T A
Sbjct: 150 RSKRKQPQTTTA 161
>AT2G33880.1 | Symbols: WOX9, HB-3, STIP | homeobox-3 |
chr2:14341639-14343597 REVERSE LENGTH=378
Length = 378
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 34 RWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQRQK 93
RWNP EQI +LE+++ G+ P EEI++I A+L+ +G + NVFYWFQN K+R + K
Sbjct: 55 RWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114
>AT4G35550.1 | Symbols: HB-4, WOX13, ATWOX13 | WUSCHEL related
homeobox 13 | chr4:16875814-16877167 REVERSE LENGTH=268
Length = 268
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 29 IAASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKA 88
+ A RW PT Q+ +LE ++ QG TP+ ++I+ IT L HG I +NV+ WFQN +A
Sbjct: 94 MTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRA 153
Query: 89 RQRQKQ 94
R ++KQ
Sbjct: 154 RSKRKQ 159
>AT1G20710.1 | Symbols: WOX10 | WUSCHEL related homeobox 10 |
chr1:7184485-7185267 FORWARD LENGTH=197
Length = 197
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 41 QITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQRQKQ 94
Q+ +LE++YK+G TP I++IT L HG I KNV++WFQN +AR ++KQ
Sbjct: 86 QLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRARSKRKQ 139
>AT3G03660.2 | Symbols: WOX11 | WUSCHEL related homeobox 11 |
chr3:889515-892162 REVERSE LENGTH=297
Length = 297
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 33 SRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQN 85
SRW+P EQI +LES++ G+ P EE +I L G + NVFYWFQN
Sbjct: 32 SRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQN 84
>AT3G03660.1 | Symbols: WOX11 | WUSCHEL related homeobox 11 |
chr3:889515-892162 REVERSE LENGTH=268
Length = 268
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 33 SRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQN 85
SRW+P EQI +LES++ G+ P EE +I L G + NVFYWFQN
Sbjct: 32 SRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQN 84
>AT5G17810.2 | Symbols: WOX12 | WUSCHEL related homeobox 12 |
chr5:5880576-5882602 REVERSE LENGTH=268
Length = 268
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 33 SRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQN 85
+RW+P EQI +LES++ G P +E +I L G + NVFYWFQN
Sbjct: 20 ARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQN 72
>AT5G17810.1 | Symbols: WOX12 | WUSCHEL related homeobox 12 |
chr5:5880576-5882602 REVERSE LENGTH=268
Length = 268
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 33 SRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQN 85
+RW+P EQI +LES++ G P +E +I L G + NVFYWFQN
Sbjct: 20 ARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQN 72