Miyakogusa Predicted Gene

Lj3g3v3188470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3188470.1 Non Chatacterized Hit- tr|C6SXY4|C6SXY4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55952
PE,95.41,0,UBIQUITIN_CONJUGAT_2,Ubiquitin-conjugating enzyme, E2;
Ubiquitin-conjugating enzyme E2, catalytic d,,CUFF.45396.1
         (109 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G59300.1 | Symbols: UBC7, ATUBC7 | ubiquitin carrier protein ...   163   2e-41
AT3G46460.1 | Symbols: UBC13 | ubiquitin-conjugating enzyme 13 |...   161   7e-41
AT3G55380.1 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |...   161   9e-41
AT3G55380.2 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |...   142   6e-35
AT5G62540.1 | Symbols: UBC3 | ubiquitin-conjugating enzyme 3 | c...    60   4e-10
AT2G02760.1 | Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enz...    58   1e-09
AT1G14400.2 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein ...    58   2e-09
AT1G14400.1 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein ...    58   2e-09
AT2G18600.1 | Symbols:  | Ubiquitin-conjugating enzyme family pr...    47   4e-06

>AT5G59300.1 | Symbols: UBC7, ATUBC7 | ubiquitin carrier protein 7 |
           chr5:23919868-23921304 REVERSE LENGTH=203
          Length = 203

 Score =  163 bits (413), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 75/96 (78%), Positives = 83/96 (86%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           V+FTS++WHPNVY+DGRVCISILHPPGDDP+GYELASERWTPVHTVE            P
Sbjct: 108 VRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGP 167

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRSQEML 109
           NDESPANVEAAKEWRD+RD+FKKKVSRCVR+SQEM 
Sbjct: 168 NDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEMF 203


>AT3G46460.1 | Symbols: UBC13 | ubiquitin-conjugating enzyme 13 |
           chr3:17096120-17097315 REVERSE LENGTH=166
          Length = 166

 Score =  161 bits (408), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 75/96 (78%), Positives = 82/96 (85%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           V+FTS+IWHPNVY DGRVCISILHPPGDDP+GYELASERWTPVHTVE            P
Sbjct: 71  VRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGP 130

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRSQEML 109
           NDESPANVEAAKEWR++RD+FKKKVSRCVR+SQEM 
Sbjct: 131 NDESPANVEAAKEWREKRDEFKKKVSRCVRKSQEMF 166


>AT3G55380.1 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |
           chr3:20531520-20532895 FORWARD LENGTH=167
          Length = 167

 Score =  161 bits (407), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 75/96 (78%), Positives = 81/96 (84%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           V FTSE+WHPNVY+DG+VCISILHPPGDDP+GYELASERWTPVHTVE            P
Sbjct: 72  VTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGP 131

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRSQEML 109
           NDESPANVEAAKEWRD R +F+KKVSRCVRRSQEML
Sbjct: 132 NDESPANVEAAKEWRDNRAEFRKKVSRCVRRSQEML 167


>AT3G55380.2 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |
           chr3:20531520-20532895 FORWARD LENGTH=201
          Length = 201

 Score =  142 bits (357), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 73/130 (56%), Positives = 81/130 (62%), Gaps = 34/130 (26%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTV-------------- 59
           V FTSE+WHPNVY+DG+VCISILHPPGDDP+GYELASERWTPVHT+              
Sbjct: 72  VTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTLVETDMFCSILSLYS 131

Query: 60  --------------------EXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVS 99
                               +            PNDESPANVEAAKEWRD R +F+KKVS
Sbjct: 132 DCFSNVRGIYKSGLRNTLEDKSIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVS 191

Query: 100 RCVRRSQEML 109
           RCVRRSQEML
Sbjct: 192 RCVRRSQEML 201


>AT5G62540.1 | Symbols: UBC3 | ubiquitin-conjugating enzyme 3 |
           chr5:25104679-25105465 FORWARD LENGTH=150
          Length = 150

 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 13/92 (14%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           V+F S ++HPN+Y DG +C+ IL               +W+P++ V             P
Sbjct: 70  VRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAVLTSIQSLLCDP 116

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRS 105
           N +SPAN EAA+ + + + ++ +KV   V +S
Sbjct: 117 NPDSPANAEAARLFSENKREYNRKVIEIVEQS 148


>AT2G02760.1 | Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enzyme
           2 | chr2:774271-775149 FORWARD LENGTH=152
          Length = 152

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 13/92 (14%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           V+F S ++HPN+Y DG +C+ IL               +W+P++ V             P
Sbjct: 70  VRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDP 116

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRS 105
           N  SPAN EAA+ + + + ++ ++V   V +S
Sbjct: 117 NPNSPANSEAARMFSESKREYNRRVREVVEQS 148


>AT1G14400.2 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein 1 |
           chr1:4927294-4928136 REVERSE LENGTH=152
          Length = 152

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 13/92 (14%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           V+F S ++HPN+Y DG +C+ IL               +W+P++ V             P
Sbjct: 70  VRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDP 116

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRS 105
           N  SPAN EAA+ + + + ++ ++V   V +S
Sbjct: 117 NPNSPANSEAARMYSESKREYNRRVRDVVEQS 148


>AT1G14400.1 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein 1 |
           chr1:4927294-4928136 REVERSE LENGTH=152
          Length = 152

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 13/92 (14%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           V+F S ++HPN+Y DG +C+ IL               +W+P++ V             P
Sbjct: 70  VRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDP 116

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRS 105
           N  SPAN EAA+ + + + ++ ++V   V +S
Sbjct: 117 NPNSPANSEAARMYSESKREYNRRVRDVVEQS 148


>AT2G18600.1 | Symbols:  | Ubiquitin-conjugating enzyme family
           protein | chr2:8073337-8074565 REVERSE LENGTH=185
          Length = 185

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 13/93 (13%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           VK  ++++HPN+  +G VC++IL              E W PV  +             P
Sbjct: 96  VKCKTKVYHPNIDLEGNVCLNILR-------------EDWKPVLNINTVIYGLFHLFTEP 142

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRSQ 106
           N E P N EAA   RD    F+  V R +   Q
Sbjct: 143 NYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQ 175