Miyakogusa Predicted Gene

Lj3g3v3155120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3155120.1 Non Chatacterized Hit- tr|I3S6U2|I3S6U2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.17,0,PTPLA
DOMAIN PROTEIN,Protein-tyrosine phosphatase-like, PTPLA;
PTPLA,Protein-tyrosine phosphatase-li,CUFF.45378.1
         (219 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G59770.1 | Symbols:  | Protein-tyrosine phosphatase-like, PTP...   233   7e-62
AT5G10480.1 | Symbols: PAS2, PEP | Protein-tyrosine phosphatase-...    93   2e-19
AT5G10480.2 | Symbols: PAS2, PEP | Protein-tyrosine phosphatase-...    87   7e-18
AT5G10480.3 | Symbols: PAS2 | Protein-tyrosine phosphatase-like,...    85   4e-17

>AT5G59770.1 | Symbols:  | Protein-tyrosine phosphatase-like, PTPLA
           | chr5:24079521-24081195 REVERSE LENGTH=272
          Length = 272

 Score =  233 bits (594), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 115/184 (62%), Positives = 141/184 (76%), Gaps = 1/184 (0%)

Query: 24  VSLTKIVFNLVSTASINGTYASAGQLIIFLQCAAFLEVIHGAIGLVPSGVLLPLMQWGGR 83
           +SL  I+ + +S  +I   YASAG LI   Q AA LEV+HGAIG+VPSG L PLMQW GR
Sbjct: 73  ISLLIILNSFLSNKTIISAYASAGFLISLFQTAAILEVLHGAIGIVPSGFLSPLMQWSGR 132

Query: 84  THFVLALVAKLDEVQELTSIFITFLAWSISEVIRYSHYAFSCLGNCPSWITYLRYTAFIV 143
           THF+LA+V ++ EVQ+   + IT +AW I E+IRY HYAF+CLG CP W+TYLRYT FIV
Sbjct: 133 THFILAIVGQIKEVQDSPWLSITLVAWCIGEMIRYPHYAFTCLGRCPYWLTYLRYTGFIV 192

Query: 144 LYPLGVGPGEIWAMYQALPIIKKKNLYADSFSSLPFSYYDFLRVVLIVYPFLWLKLYLHL 203
           +YP G+  GE+  MY+ALP +K++NLYA+ FS  PFSYYDFL  VL+VYPFLWLKLYL L
Sbjct: 193 IYPTGLV-GELLIMYKALPYVKERNLYANFFSVFPFSYYDFLWAVLLVYPFLWLKLYLQL 251

Query: 204 FKQR 207
           FKQR
Sbjct: 252 FKQR 255


>AT5G10480.1 | Symbols: PAS2, PEP | Protein-tyrosine
           phosphatase-like, PTPLA | chr5:3298047-3300048 REVERSE
           LENGTH=221
          Length = 221

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 6/216 (2%)

Query: 6   ISTLYLLSYNSLQAIGWTVSLTKIVFNLVSTASINGTYASAGQLIIFLQCAAFLEVIHGA 65
           +  +YL  YN +   GW   L   +  L  T   N  Y +  + +   Q AA LE++HG 
Sbjct: 8   VRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYEN-VYDAIEKPLQLAQTAAVLEILHGL 66

Query: 66  IGLVPSGVLLPLMQWGGRTHFVLALVAKLDEVQELTSIFITFLAWSISEVIRYSHYAF-S 124
           +GLV S V   L Q G R      ++    EV+    +    ++WSI+E+IRYS + F  
Sbjct: 67  VGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEIIRYSFFGFKE 126

Query: 125 CLGNCPSWITYLRYTAFIVLYPLGVGPGEIWAMYQALPIIKKKNLYADSFSSLPFSYYDF 184
            LG  PSW  +LRY++F++LYP G+   E+  +Y ALP IK   +Y+    ++    +DF
Sbjct: 127 ALGFAPSWHLWLRYSSFLLLYPTGI-TSEVGLIYLALPHIKTSEMYSVRMPNILNFSFDF 185

Query: 185 LR---VVLIVYPFLWLKLYLHLFKQRRAKLYRQHDK 217
                +VL +Y      +Y ++  QR+  L +   +
Sbjct: 186 FYATILVLAIYVPGSPHMYRYMLGQRKRALSKSKRE 221


>AT5G10480.2 | Symbols: PAS2, PEP | Protein-tyrosine
           phosphatase-like, PTPLA | chr5:3298047-3299980 REVERSE
           LENGTH=196
          Length = 196

 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 90/168 (53%), Gaps = 5/168 (2%)

Query: 54  QCAAFLEVIHGAIGLVPSGVLLPLMQWGGRTHFVLALVAKLDEVQELTSIFITFLAWSIS 113
           Q AA LE++HG +GLV S V   L Q G R      ++    EV+    +    ++WSI+
Sbjct: 30  QTAAVLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSIT 89

Query: 114 EVIRYSHYAF-SCLGNCPSWITYLRYTAFIVLYPLGVGPGEIWAMYQALPIIKKKNLYAD 172
           E+IRYS + F   LG  PSW  +LRY++F++LYP G+   E+  +Y ALP IK   +Y+ 
Sbjct: 90  EIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGIT-SEVGLIYLALPHIKTSEMYSV 148

Query: 173 SFSSLPFSYYDFLR---VVLIVYPFLWLKLYLHLFKQRRAKLYRQHDK 217
              ++    +DF     +VL +Y      +Y ++  QR+  L +   +
Sbjct: 149 RMPNILNFSFDFFYATILVLAIYVPGSPHMYRYMLGQRKRALSKSKRE 196


>AT5G10480.3 | Symbols: PAS2 | Protein-tyrosine phosphatase-like,
           PTPLA | chr5:3298047-3300048 REVERSE LENGTH=230
          Length = 230

 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 15/225 (6%)

Query: 6   ISTLYLLSYNSLQAIGWTVSLTKIVFNLVSTASINGTYASAGQLIIFLQCAAFLEVIHGA 65
           +  +YL  YN +   GW   L   +  L  T   N  Y +  + +   Q AA LE++HG 
Sbjct: 8   VRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYEN-VYDAIEKPLQLAQTAAVLEILHGL 66

Query: 66  IGLVPSGVLLPLMQWGGRTHFVLALVAKLDEVQELTSIFITFLAWSIS---------EVI 116
           +GLV S V   L Q G R      ++    EV+    +    ++WSI+         E+I
Sbjct: 67  VGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEFPITTWIVEII 126

Query: 117 RYSHYAF-SCLGNCPSWITYLRYTAFIVLYPLGVGPGEIWAMYQALPIIKKKNLYADSFS 175
           RYS + F   LG  PSW  +LRY++F++LYP G+   E+  +Y ALP IK   +Y+    
Sbjct: 127 RYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGIT-SEVGLIYLALPHIKTSEMYSVRMP 185

Query: 176 SLPFSYYDFLR---VVLIVYPFLWLKLYLHLFKQRRAKLYRQHDK 217
           ++    +DF     +VL +Y      +Y ++  QR+  L +   +
Sbjct: 186 NILNFSFDFFYATILVLAIYVPGSPHMYRYMLGQRKRALSKSKRE 230