Miyakogusa Predicted Gene

Lj3g3v3132900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3132900.1 Non Chatacterized Hit- tr|I1LK90|I1LK90_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.69,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; CCR4 NOT-RELATED,NULL;
NOT2_3_5,NOT2/NOT3/NOT5,CUFF.45345.1
         (613 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G07705.2 | Symbols:  | NOT2 / NOT3 / NOT5 family | chr1:23820...   702   0.0  
AT1G07705.1 | Symbols:  | NOT2 / NOT3 / NOT5 family | chr1:23820...   593   e-169
AT5G59710.1 | Symbols: VIP2, AtVIP2 | VIRE2 interacting protein ...   565   e-161
AT5G18230.1 | Symbols:  | transcription regulator NOT2/NOT3/NOT5...    49   1e-05

>AT1G07705.2 | Symbols:  | NOT2 / NOT3 / NOT5 family |
           chr1:2382090-2385856 FORWARD LENGTH=614
          Length = 614

 Score =  702 bits (1811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/614 (61%), Positives = 437/614 (71%), Gaps = 40/614 (6%)

Query: 18  DGAGRSFATSFSG-------------SIQGLHNIHGSFNVPNMSGTLTSRNSTINNVPSG 64
           DG+GR+F +SFSG             SIQGLHNIHG+FNVPN++G+L SRNS++N VPS 
Sbjct: 18  DGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSLGSRNSSLNGVPSA 77

Query: 65  GVQQPTGSLSSGRFTSNNLPVALSQLXXXXXXXXXXVTNRGGLGVSPILGNAGPRIXXXX 124
           GVQQ  GS+S+GRF S+N+PVALSQ+          +TNRGGLGVSPILGN G R+    
Sbjct: 78  GVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRGGLGVSPILGNVGSRMTSSM 137

Query: 125 XXXXXXXXXXXXXXX---LSVPGLTXXXXXXXXXXXXXXXIQGQNRLMSGMLPQGSPQVL 181
                             LS+P L                  GQNR+M G+LPQGSPQVL
Sbjct: 138 GNMVGGGTMGRTLSSGGGLSIPSLGSRLNLAVNSGSGNI---GQNRMMGGVLPQGSPQVL 194

Query: 182 AMLGNSYPSAGGPFSQSHIQGVNNLNSMRMLNDVNSNDTSPFDIN-DFPQLTSRPGSAXX 240
           +MLGNSYPSAGG  SQ+H+Q +N+L+SM +LND+NSNDTSPFDIN DFPQLTSRP SA  
Sbjct: 195 SMLGNSYPSAGG-LSQNHVQAMNSLSSMGLLNDMNSNDTSPFDINNDFPQLTSRPSSAGS 253

Query: 241 XXXXXXXXXXXXXXVSPIVQQNQEFSLQNEEFPALPGFKGGNADYTMDMHQKEQLHDNAV 300
                         +SPIVQQNQEFS+QNE+FPALPG+KG +ADY MD+H KEQLH+N+V
Sbjct: 254 QGQLGSRLKQGLG-ISPIVQQNQEFSIQNEDFPALPGYKGSSADYPMDLHHKEQLHENSV 312

Query: 301 SMMQSQHFSMGRSAGFSLGGAYSSHRAQQQQQHTPSIXXXXXXXXXXXXXXQDLLHLHGS 360
            MMQSQ  SMGRS GF+LGGAY+SHR QQQQQH  ++                 + LHGS
Sbjct: 313 LMMQSQQLSMGRSGGFNLGGAYTSHRPQQQQQHAQAVSSSG-------------VSLHGS 359

Query: 361 DIFPSSHSAYHSQTSGPPGIGLRPLNSPNTVSGMGSYDXXXXXXXXXXXXXXXXX--XMS 418
           DIF SSH  YHSQT G PGIGLR +NS N+++GMG YD                    MS
Sbjct: 360 DIFSSSHPPYHSQTGGAPGIGLRSMNSANSITGMG-YDQQLIQQYQHQQNSAQYRLQQMS 418

Query: 419 AVSQSFKDQGMKSMQTAQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSE 478
           A SQ F+D G+KSMQ+ QS PD FGLLGLLSVI+MSDPDLTSLALGIDLTTLGLNLNS+E
Sbjct: 419 AASQPFRDVGLKSMQSTQSNPDRFGLLGLLSVIKMSDPDLTSLALGIDLTTLGLNLNSTE 478

Query: 479 NLHKTFASPWSEDPTKADPEFSVPQCYYTKQPPTLHQGYFSKFSVETLFYIFYSMPKDEA 538
           NLHKTF SPWS +P+K DPEFSVPQCYY K PP LHQG F+K  VETLFY+FYSMPKDEA
Sbjct: 479 NLHKTFGSPWSNEPSKVDPEFSVPQCYYAKNPPPLHQGLFAKLLVETLFYVFYSMPKDEA 538

Query: 539 QLYAANELNNRGWFYHKELRLWLIRVPNIEPLVKTNTHERGSYHCFEPNTFEIIRKDNFV 598
           QLYAANEL NRGWFYHKE RLW IR+   EPLVKTN +ERGSYHCF+PN+FEI++K+NFV
Sbjct: 539 QLYAANELYNRGWFYHKEHRLWFIRIG--EPLVKTNAYERGSYHCFDPNSFEIVQKENFV 596

Query: 599 LQYELLEKRPHLPQ 612
           L YE+LEKRP + Q
Sbjct: 597 LYYEMLEKRPSISQ 610


>AT1G07705.1 | Symbols:  | NOT2 / NOT3 / NOT5 family |
           chr1:2382090-2385282 FORWARD LENGTH=546
          Length = 546

 Score =  593 bits (1529), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 328/548 (59%), Positives = 381/548 (69%), Gaps = 38/548 (6%)

Query: 18  DGAGRSFATSFSG-------------SIQGLHNIHGSFNVPNMSGTLTSRNSTINNVPSG 64
           DG+GR+F +SFSG             SIQGLHNIHG+FNVPN++G+L SRNS++N VPS 
Sbjct: 18  DGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSLGSRNSSLNGVPSA 77

Query: 65  GVQQPTGSLSSGRFTSNNLPVALSQLXXXXXXXXXXVTNRGGLGVSPILGNAGPRIXXXX 124
           GVQQ  GS+S+GRF S+N+PVALSQ+          +TNRGGLGVSPILGN G R+    
Sbjct: 78  GVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRGGLGVSPILGNVGSRMTSSM 137

Query: 125 XXXXXXXXXXXXXXX---LSVPGLTXXXXXXXXXXXXXXXIQGQNRLMSGMLPQGSPQVL 181
                             LS+P L                  GQNR+M G+LPQGSPQVL
Sbjct: 138 GNMVGGGTMGRTLSSGGGLSIPSLGSRLNLAVNSGSGNI---GQNRMMGGVLPQGSPQVL 194

Query: 182 AMLGNSYPSAGGPFSQSHIQGVNNLNSMRMLNDVNSNDTSPFDIN-DFPQLTSRPGSAXX 240
           +MLGNSYPSAGG  SQ+H+Q +N+L+SM +LND+NSNDTSPFDIN DFPQLTSRP SA  
Sbjct: 195 SMLGNSYPSAGG-LSQNHVQAMNSLSSMGLLNDMNSNDTSPFDINNDFPQLTSRPSSAGS 253

Query: 241 XXXXXXXXXXXXXXVSPIVQQNQEFSLQNEEFPALPGFKGGNADYTMDMHQKEQLHDNAV 300
                         +SPIVQQNQEFS+QNE+FPALPG+KG +ADY MD+H KEQLH+N+V
Sbjct: 254 QGQLGSRLKQGLG-ISPIVQQNQEFSIQNEDFPALPGYKGSSADYPMDLHHKEQLHENSV 312

Query: 301 SMMQSQHFSMGRSAGFSLGGAYSSHRAQQQQQHTPSIXXXXXXXXXXXXXXQDLLHLHGS 360
            MMQSQ  SMGRS GF+LGGAY+SHR QQQQQH  ++                 + LHGS
Sbjct: 313 LMMQSQQLSMGRSGGFNLGGAYTSHRPQQQQQHAQAVSSSG-------------VSLHGS 359

Query: 361 DIFPSSHSAYHSQTSGPPGIGLRPLNSPNTVSGMGSYDXXXXXXXXXXXXXXX--XXXMS 418
           DIF SSH  YHSQT G PGIGLR +NS N+++GMG YD                    MS
Sbjct: 360 DIFSSSHPPYHSQTGGAPGIGLRSMNSANSITGMG-YDQQLIQQYQHQQNSAQYRLQQMS 418

Query: 419 AVSQSFKDQGMKSMQTAQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSE 478
           A SQ F+D G+KSMQ+ QS PD FGLLGLLSVI+MSDPDLTSLALGIDLTTLGLNLNS+E
Sbjct: 419 AASQPFRDVGLKSMQSTQSNPDRFGLLGLLSVIKMSDPDLTSLALGIDLTTLGLNLNSTE 478

Query: 479 NLHKTFASPWSEDPTKADPEFSVPQCYYTKQPPTLHQGYFSKFSVETLFYIFYSMPKDEA 538
           NLHKTF SPWS +P+K DPEFSVPQCYY K PP LHQG F+K  VETLFY+FYSMPKDEA
Sbjct: 479 NLHKTFGSPWSNEPSKVDPEFSVPQCYYAKNPPPLHQGLFAKLLVETLFYVFYSMPKDEA 538

Query: 539 QLYAANEL 546
           QLYAANEL
Sbjct: 539 QLYAANEL 546


>AT5G59710.1 | Symbols: VIP2, AtVIP2 | VIRE2 interacting protein 2 |
           chr5:24058157-24061736 FORWARD LENGTH=614
          Length = 614

 Score =  565 bits (1457), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 323/649 (49%), Positives = 397/649 (61%), Gaps = 104/649 (16%)

Query: 17  PDGAGRSFATSFSG-------------SIQGLHNIHGSFNVPNMSGTLTSRNSTINNVPS 63
           PDG+GRSF  S+SG             ++QGLHNIHG++NV NM GTLTSRNS++N++PS
Sbjct: 16  PDGSGRSFTASYSGQSGAPSPSFHHTGNLQGLHNIHGNYNVGNMQGTLTSRNSSMNSIPS 75

Query: 64  GGVQQPTGSLSSGRFTSNNLPVALSQLXXXXXXXXXXVTNRG------------------ 105
            GVQQP GS SSGRF SNNLPV LSQL          + NRG                  
Sbjct: 76  AGVQQPNGSFSSGRFASNNLPVNLSQLSHGSSHGHSGIPNRGLNVVGNPGFSSNANGVGG 135

Query: 106 -------------------GLGVSPILGNAGPRIXXXXXXXXXXXX--XXXXXXXLSVPG 144
                              G+G+S +LGN+GPRI                     LS+PG
Sbjct: 136 SIPGILSTSAGLSNRNSVPGMGISQLLGNSGPRITNSMGNMVGGGNLGRNISSGGLSIPG 195

Query: 145 LTXXXXXXXXXXXXXXXIQGQNRLMSGMLPQGSPQVLAMLGNSYPSAGGPFSQSHIQGVN 204
           L+               +QGQNR+M G+LPQGS QV++MLGNSY + GGP SQ+H+Q VN
Sbjct: 196 LSSRLNLAANSGSGLN-VQGQNRMMGGVLPQGS-QVMSMLGNSYHTGGGPLSQNHVQSVN 253

Query: 205 NLNSMRMLNDVNSNDTSPFDIN-DFPQLTSRPGSAXXXXXXXXXXXXXXXXVSPIVQQNQ 263
           N+    ML+D + ND+S FDIN DFPQLTSRPGSA                V P+VQQNQ
Sbjct: 254 NM----MLSD-HPNDSSLFDINNDFPQLTSRPGSAGGTQGHLGSLRKQGLGV-PLVQQNQ 307

Query: 264 EFSLQNEEFPALPGFKGGNADYTMDMHQKEQLHDNAVSMMQSQHFSMGRSAGFSLGGAYS 323
           EFS+QNE+FPALPG+KGGN++Y MD+HQKEQLHDNA+SMM SQ+FSMGRS GF+LG  YS
Sbjct: 308 EFSIQNEDFPALPGYKGGNSEYPMDLHQKEQLHDNAMSMMHSQNFSMGRSGGFNLGATYS 367

Query: 324 SHRAQQQQQHTPSIXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSAYHSQTSGPPGIGLR 383
           SHR QQQ QHT                                     S T G  G+GLR
Sbjct: 368 SHRPQQQPQHT-------------------------------------SSTGGLQGLGLR 390

Query: 384 PLNSPNTVSGMGSYDXXXXXXXXXXXXXXXXXXMSAVSQSFKDQGMKSMQTAQSTPDPFG 443
           PL+SPN VS +G                     MS+++Q F+D  MKS    QS  DPF 
Sbjct: 391 PLSSPNAVSSIGYDQLIQQYQQHQNQSQFPVQQMSSINQ-FRDSEMKS---TQSEADPFC 446

Query: 444 LLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFASPWSEDPTKADPEFSVPQ 503
           LLGLL V+  S+P+LTSLALGIDLTTLGL+LNS+ NL+KTFASPW+ +P K++ EF+VP 
Sbjct: 447 LLGLLDVLNRSNPELTSLALGIDLTTLGLDLNSTGNLYKTFASPWTNEPAKSEVEFTVPN 506

Query: 504 CYYTKQPPTLHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELNNRGWFYHKELRLWLIR 563
           CYY  +PP L +  F +FS E LFY FYSMPKDEAQLYAA+EL  RGWFYHKELR+W  R
Sbjct: 507 CYYATEPPPLTRASFKRFSYELLFYTFYSMPKDEAQLYAADELYERGWFYHKELRVWFFR 566

Query: 564 VPNIEPLVKTNTHERGSYHCFEPNTFEIIRKDNFVLQYELLEKRPHLPQ 612
           V   EPLV+  T+ERG+Y   +PN+F+ +RK++FV++YEL+EKRP L Q
Sbjct: 567 VG--EPLVRAATYERGTYEYLDPNSFKTVRKEHFVIKYELMEKRPSLLQ 613


>AT5G18230.1 | Symbols:  | transcription regulator NOT2/NOT3/NOT5
           family protein | chr5:6021610-6027031 REVERSE LENGTH=843
          Length = 843

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 23/123 (18%)

Query: 501 VPQCYYTKQPPTLHQGYF------SKFSVETLFYIFYSMPKDEAQLYAANELNNRGWFYH 554
            PQ +   Q P ++            +  +TLF+ FY       Q  AA EL  + W YH
Sbjct: 721 TPQTFPQTQAPIINNPLLWERLGSDAYGTDTLFFAFYYQQNSYQQYLAAKELKKQSWRYH 780

Query: 555 KELRLWLIRVPNIEPLVKTNTHERGSYHCFEPNTFEIIRKDN------------FVLQYE 602
           ++   W  R  + EP + T+ +E+G+Y  F+   F+  + +N            F  +Y 
Sbjct: 781 RKFNTWFQR--HKEPKIATDEYEQGAYVYFD---FQTPKDENQEGGWCQRIKNEFTFEYS 835

Query: 603 LLE 605
            LE
Sbjct: 836 YLE 838