Miyakogusa Predicted Gene
- Lj3g3v3119760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3119760.1 Non Chatacterized Hit- tr|D8SS78|D8SS78_SELML
Putative uncharacterized protein OS=Selaginella
moelle,27.9,2e-18,PPR,Pentatricopeptide repeat; seg,NULL;
PPR_2,Pentatricopeptide repeat; no
description,Tetratricopep,CUFF.45331.1
(445 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 237 1e-62
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 1e-42
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 1e-42
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 2e-42
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 169 5e-42
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 6e-42
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 168 8e-42
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 5e-41
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 3e-40
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 4e-40
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 4e-40
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 161 8e-40
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 8e-39
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 158 8e-39
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 1e-38
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 1e-38
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 2e-38
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 5e-38
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 6e-38
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 2e-37
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 5e-37
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 6e-37
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 7e-37
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 9e-37
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 9e-37
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 1e-36
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 9e-36
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 5e-35
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 7e-35
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 7e-35
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 7e-34
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 7e-34
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 1e-33
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 139 3e-33
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 2e-32
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 135 4e-32
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 8e-31
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 8e-31
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 1e-30
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 7e-30
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 9e-30
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 127 1e-29
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 126 3e-29
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 6e-29
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 6e-29
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 6e-29
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 6e-29
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 9e-29
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 7e-28
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 121 7e-28
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 120 1e-27
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 7e-27
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 3e-26
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 9e-26
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 8e-25
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 8e-25
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 9e-25
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 110 2e-24
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 108 9e-24
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 9e-24
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 105 5e-23
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 105 5e-23
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 105 7e-23
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 4e-22
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 102 7e-22
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 9e-22
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 99 5e-21
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 97 3e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 92 1e-18
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 84 2e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 83 3e-16
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 83 4e-16
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 81 2e-15
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 75 6e-14
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 75 1e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 74 2e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 70 3e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 69 5e-12
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 69 8e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 66 5e-11
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 7e-11
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 63 4e-10
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 62 6e-10
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 62 6e-10
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 62 7e-10
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 8e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 62 9e-10
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 62 1e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 62 1e-09
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 60 3e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 60 4e-09
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 58 1e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 58 1e-08
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 56 4e-08
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 56 5e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 55 1e-07
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 55 1e-07
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 54 2e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 54 3e-07
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 53 5e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 9e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 52 9e-07
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 51 2e-06
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 228/472 (48%), Gaps = 99/472 (20%)
Query: 25 LRNRLSPP----NVIIRGFTAVGNL--------QSESK--------------------KV 52
L +++SP N++IRGF GN+ + E+K K+
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 53 GGAFELLKAGTEKGVESNSVSGR----------RIREAEQVVDET---------TTYNAL 93
F+LL++ KG+E N +S R++E V+ E TYN L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 94 VLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDL 153
+ YC + +A+ + M GL P++I++ +++ +C G M M + L
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 154 APDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVG 209
P+ERTYT+L+ F KG+ +A +VL EM D+GFSPSV TYN LI ++EDA+
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 210 VFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRT 269
V M E+ LSPDVV+Y+T++S FC+ D+++A +K EMV KGI PD TY LI+
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCR--SYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 270 LCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG 329
C Q+R EA DL+ EMLR G+ P+ TYT L+NAY +EG KA L +EM KG LP
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 330 FVT------GFS---------------------PSHVTYN---------------AIIYG 347
VT G + PS VTY+ ++I G
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614
Query: 348 LCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
C+ G EA V M PD +Y +I G CR + KAY L E+
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 175/344 (50%), Gaps = 21/344 (6%)
Query: 89 TYNALVLAYCCDER-VDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
+YNA++ A +R + A + + M E + PN+ ++N +++G C G +
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLR 203
M K P+ TY +LI +C K+L M G P++ +YN +I R R
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
+++ V M R S D VTYNTLI +CK E + +A M AEM+ G+ P TY
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK--EGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
LI ++C ++ A + +M G+ PN TYT L++ + +G ++A+ + EM
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
GFSPS VTYNA+I G C+ G+ E+A+ VL M E GLSPD VSY TV+ GF
Sbjct: 409 --------NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 384 CRIREPGKAYELKVEVDENMISWLGIWGLFEDTRKSLMQGLSNE 427
CR + +A +K E+ E I I T SL+QG +
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTI------TYSSLIQGFCEQ 498
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 145/304 (47%), Gaps = 36/304 (11%)
Query: 27 NRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDE 86
N SP V + A+ N + K+ A +L+ EKG+ + VS
Sbjct: 409 NGFSPSVVT---YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS------------- 452
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
Y+ ++ +C VDEA+ + R M E+G+KP+ I++++++QG C + R
Sbjct: 453 ---YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M + L PDE TYT+LI+ +C +G KA ++ +EM++ G P V TY+ LI L
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD---LEKAFEMK-----AEMVHK 254
R +A + + + P VTY+TLI ++ L K F MK A+ V +
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 255 GIL-----PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEG 309
+L PD Y +I C + +AY L++EM++ G + T L+ A EG
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Query: 310 QFSK 313
+ ++
Sbjct: 690 KVNE 693
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 116/307 (37%), Gaps = 89/307 (28%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAE 81
P+V+ ++ V + S V A + + EKG++ ++++ RR +EA
Sbjct: 448 PDVV--SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 82 QVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+ +E TY AL+ AYC + +++A+ + M E+G+ P++++++ ++ GL
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 133 --------------------------------------------------CGKGRMXXXX 142
C KG M
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M K+ PD Y +IH C G KA + EM+ SGF T L++ L
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
Query: 203 RLEDAVG--------VFRG--MTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV 252
E V V R ++E + + +V N +E +++ ++ AEM
Sbjct: 686 HKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINH--------REGNMDVVLDVLAEMA 737
Query: 253 HKGILPD 259
G LP+
Sbjct: 738 KDGFLPN 744
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 182/356 (51%), Gaps = 33/356 (9%)
Query: 48 ESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREA---------EQVVDETT 88
+ K + AF++ KG N V+ RRI EA ++
Sbjct: 265 QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR 324
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY L+ + C ER EA+ +++ M E G+KPN+ ++ ++ LC + + M
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR---RLRLE 205
+K L P+ TY +LI+ +C +G A V+ M SP+ TYN LI+ + +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH 444
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A+GV M ER + PDVVTYN+LI C + + + A+ + + M +G++PD TY
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQC--RSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+I +LC +R+ EA DLF + + GV+PN YT L++ Y G+ +A + ++M K
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
L P+ +T+NA+I+GLC G+ +EA + M +IGL P VS T+++
Sbjct: 563 CL--------PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP-TVSTDTILI 609
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 34/344 (9%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
++V TYN +V YC V+EA + + E GL P+ ++ +++ G C + +
Sbjct: 212 DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDS 271
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M K +E YT LIH C +A + +M D P+V TY LI+
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 201 RL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
L R +A+ + + M E + P++ TY LI C + EKA E+ +M+ KG+
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC--SQCKFEKARELLGQMLEKGL 389
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
+P+ TY LI C + + +A D+ M +SPN TY L+ Y + KA
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY-CKSNVHKAMG 448
Query: 317 LQDEMTHKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLC 349
+ ++M + LP VT G P TY ++I LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 350 LLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAY 393
R EEA + + + G++P+ V Y +I G+C+ + +A+
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 143/310 (46%), Gaps = 15/310 (4%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YN L+ + VDE + M E + PN+ ++N +V G C G + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
+ L PD TYTSLI +C + A KV +EM G + Y LI L R++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+A+ +F M + + P V TY LI C + +A + EM GI P+ TY
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK--SEALNLVKEMEETGIKPNIHTYTV 363
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
LI +LC Q + +A +L +ML G+ PN TY L+N Y G A + + M +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR- 422
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
SP+ TYN +I G C +A+GVL M E + PD V+Y ++I G CR
Sbjct: 423 -------KLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 386 IREPGKAYEL 395
AY L
Sbjct: 475 SGNFDSAYRL 484
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 169/377 (44%), Gaps = 37/377 (9%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
P+V+ + ++ + Q S A+ LL ++G+ V + TY
Sbjct: 460 PDVVT--YNSLIDGQCRSGNFDSAYRLLSLMNDRGL----------------VPDQWTYT 501
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
+++ + C +RV+EA + + ++G+ PN++ + A++ G C G++ M K
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDA 207
+ P+ T+ +LIH C G +A + +M+ G P+V+T LI RL + A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
F+ M PD TY T I +C +E L A +M A+M G+ PD TY LI
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYC--REGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
+ + + A+D+ + M G P+ T+ L+ + +E ++ K + E+ +
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK-HLLEMKYGKQKGSEPELCAMSNM 738
Query: 328 PGFVT-----------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEI-GLSPDAVS 375
F T +P+ +Y +I G+C +G A V M G+SP +
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 376 YCTVILGFCRIREPGKA 392
+ ++ C++++ +A
Sbjct: 799 FNALLSCCCKLKKHNEA 815
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 169/399 (42%), Gaps = 55/399 (13%)
Query: 39 FTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYC 98
+T++ + +SK+V A +L + +KGV N V Y AL+ YC
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV----------------MYTALIDGYC 543
Query: 99 CDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDER 158
+VDEA +L M + PN ++FNA++ GLC G++ M + L P
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGM 214
T T LIH G A +M+ SG P TY I R RL DA + M
Sbjct: 604 TDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIR------ 268
E +SPD+ TY++LI + L + + AF++ M G P T+ LI+
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNF--AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Query: 269 ---------TLCLQQRLSE---AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
LC + E +L +M+ V+PN ++Y L+ G A
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEK 781
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
+ D M G SPS + +NA++ C L + EA V+ M +G P S
Sbjct: 782 VFDHMQRN-------EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES- 833
Query: 377 CTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFED 415
C V++ C + + G+ E V +N++ G +ED
Sbjct: 834 CKVLI--CGLYKKGEK-ERGTSVFQNLLQ----CGYYED 865
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 122/296 (41%), Gaps = 34/296 (11%)
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN-RLIRRLRLEDAVGVFRGMTER 217
+Y SL+ L + G+ G K+ MI S S A Y L R++ ++ + +
Sbjct: 125 SYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLI-- 182
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
+ YNTL++ + D K M EM+ + P+ TY ++ C +
Sbjct: 183 -----IGCYNTLLNSLARFGLVDEMKQVYM--EMLEDKVCPNIYTYNKMVNGYCKLGNVE 235
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
EA +++ G+ P+ TYT L+ Y AF + +EM KG +
Sbjct: 236 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGC--------RRN 287
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKV 397
V Y +I+GLC+ R +EA+ + M + P +Y +I C +A L
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347
Query: 398 EVDEN-----------MISWLGIWGLFEDTRKSLMQGLS-----NEDTFSSLMNDY 437
E++E +I L FE R+ L Q L N T+++L+N Y
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 18/216 (8%)
Query: 188 FSPSVATYNRLIRRLRLEDAVGV-FRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFE 246
+ SV +Y L+ L VGV F+ S D V + C+ D + FE
Sbjct: 119 YKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKD--ERFE 176
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
+K +++ Y L+ +L + E ++ EML V PN TY ++N Y
Sbjct: 177 LKYKLI-------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC 229
Query: 307 IEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPE 366
G +A ++ G P F T Y ++I G C + A V MP
Sbjct: 230 KLGNVEEANQYVSKIVEAGLDPDFFT--------YTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 367 IGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
G + V+Y +I G C R +A +L V++ ++
Sbjct: 282 KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 317
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 181/371 (48%), Gaps = 30/371 (8%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
+YN ++ C R+ EA +L M +G P++IS++ VV G C G +
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRL 202
M +K L P+ Y S+I L C +A + SEMI G P Y LI +R
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
+ A F M RD++PDV+TY +IS FC++ D+ +A ++ EM KG+ PD+ T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI--GDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
+ LI C + +A+ + M++ G SPN TYT L++ EG A L EM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM- 482
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
+ G P+ TYN+I+ GLC G EEA+ ++ GL+ D V+Y T++
Sbjct: 483 -------WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 383 FCRIREPGKAYELKVE----------VDEN-MISWLGIWGLFEDTRK----SLMQGLS-N 426
+C+ E KA E+ E V N +++ + G+ ED K L +G++ N
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 427 EDTFSSLMNDY 437
TF+SL+ Y
Sbjct: 596 ATTFNSLVKQY 606
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 180/391 (46%), Gaps = 35/391 (8%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNS-VSGR---------RIREAE 81
P+VI ++ V N ++ ++L++ KG++ NS + G ++ EAE
Sbjct: 279 PDVI--SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 82 QVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+ E T Y L+ +C + A M R + P+++++ A++ G
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C G M M K L PD T+T LI+ +C GH A +V + MI +G SP+V
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
TY LI L L+ A + M + L P++ TYN++++ C K ++E+A ++
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC--KSGNIEEAVKLV 514
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
E G+ D TY L+ C + +A ++ +EML G+ P T+ LMN + +
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 309 GQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIG 368
G L + M K G +P+ T+N+++ C+ + A + + M G
Sbjct: 575 GMLEDGEKLLNWMLAK--------GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 369 LSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
+ PD +Y ++ G C+ R +A+ L E+
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 15/369 (4%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
+ + + TY A++ +C + EA + M +GL+P+ ++F ++ G C G M
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M Q +P+ TYT+LI C +G A ++L EM G P++ TYN +
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
+ L +E+AV + L+ D VTY TL+ +CK E D KA E+ EM+ K
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD--KAQEILKEMLGK 555
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G+ P T+ L+ CL L + L ML G++PN T+ L+ Y I A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ +M +G P TY ++ G C +EA + + M G S
Sbjct: 616 TAIYKDMCSRGV--------GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 375 SYCTVILGFCRIREPGKAYELKVEV-DENMISWLGIWGLFEDTRKSLMQGLSNEDTFSSL 433
+Y +I GF + ++ +A E+ ++ E + + I+ F DT+ + + D +
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Query: 434 MNDYLAQDE 442
+ +YL ++
Sbjct: 728 IENYLVDEQ 736
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 29/257 (11%)
Query: 32 PNVI-----IRGFTAVGNLQSESKKVGGAFELLKAGTEKGVES-NSV-----SGRRIREA 80
PNV+ I G G+L S ++ + E+ K G + + + NS+ I EA
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLH---EMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 81 EQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQG 131
++V E T TY L+ AYC +D+A IL+ M +GL+P +++FN ++ G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 132 LCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPS 191
C G + M K +AP+ T+ SL+ +C + + A + +M G P
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 192 VATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM 247
TY L+ + +++A +F+ M + S V TY+ LI F LK +A E+
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF--LKRKKFLEAREV 688
Query: 248 KAEMVHKGILPDADTYE 264
+M +G+ D + ++
Sbjct: 689 FDQMRREGLAADKEIFD 705
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 99/251 (39%), Gaps = 53/251 (21%)
Query: 151 KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL-----RLE 205
KD D R + + D G +AR+V +M++ G SV + N + RL +
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A+ VFR E + +V +YN +I
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVI----------------------------------- 253
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+C R+ EA+ L M G +P+ +Y+ ++N Y G+ K + L + M K
Sbjct: 254 --HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK- 310
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
G P+ Y +II LC + + EA M G+ PD V Y T+I GFC+
Sbjct: 311 -------GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 386 ---IREPGKAY 393
IR K +
Sbjct: 364 RGDIRAASKFF 374
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 181/371 (48%), Gaps = 30/371 (8%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
+YN ++ C R+ EA +L M +G P++IS++ VV G C G +
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRL 202
M +K L P+ Y S+I L C +A + SEMI G P Y LI +R
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
+ A F M RD++PDV+TY +IS FC++ D+ +A ++ EM KG+ PD+ T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI--GDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
+ LI C + +A+ + M++ G SPN TYT L++ EG A L EM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM- 482
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
+ G P+ TYN+I+ GLC G EEA+ ++ GL+ D V+Y T++
Sbjct: 483 -------WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 383 FCRIREPGKAYELKVE----------VDEN-MISWLGIWGLFEDTRK----SLMQGLS-N 426
+C+ E KA E+ E V N +++ + G+ ED K L +G++ N
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 427 EDTFSSLMNDY 437
TF+SL+ Y
Sbjct: 596 ATTFNSLVKQY 606
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 180/391 (46%), Gaps = 35/391 (8%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNS-VSGR---------RIREAE 81
P+VI ++ V N ++ ++L++ KG++ NS + G ++ EAE
Sbjct: 279 PDVI--SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 82 QVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+ E T Y L+ +C + A M R + P+++++ A++ G
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C G M M K L PD T+T LI+ +C GH A +V + MI +G SP+V
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
TY LI L L+ A + M + L P++ TYN++++ C K ++E+A ++
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC--KSGNIEEAVKLV 514
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
E G+ D TY L+ C + +A ++ +EML G+ P T+ LMN + +
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 309 GQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIG 368
G L + M K G +P+ T+N+++ C+ + A + + M G
Sbjct: 575 GMLEDGEKLLNWMLAK--------GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 369 LSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
+ PD +Y ++ G C+ R +A+ L E+
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 15/369 (4%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
+ + + TY A++ +C + EA + M +GL+P+ ++F ++ G C G M
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M Q +P+ TYT+LI C +G A ++L EM G P++ TYN +
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
+ L +E+AV + L+ D VTY TL+ +CK E D KA E+ EM+ K
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD--KAQEILKEMLGK 555
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G+ P T+ L+ CL L + L ML G++PN T+ L+ Y I A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ +M +G P TY ++ G C +EA + + M G S
Sbjct: 616 TAIYKDMCSRGV--------GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 375 SYCTVILGFCRIREPGKAYELKVEV-DENMISWLGIWGLFEDTRKSLMQGLSNEDTFSSL 433
+Y +I GF + ++ +A E+ ++ E + + I+ F DT+ + + D +
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Query: 434 MNDYLAQDE 442
+ +YL ++
Sbjct: 728 IENYLVDEQ 736
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 29/257 (11%)
Query: 32 PNVI-----IRGFTAVGNLQSESKKVGGAFELLKAGTEKGVES-NSV-----SGRRIREA 80
PNV+ I G G+L S ++ + E+ K G + + + NS+ I EA
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLH---EMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 81 EQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQG 131
++V E T TY L+ AYC +D+A IL+ M +GL+P +++FN ++ G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 132 LCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPS 191
C G + M K +AP+ T+ SL+ +C + + A + +M G P
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 192 VATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM 247
TY L+ + +++A +F+ M + S V TY+ LI F LK +A E+
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF--LKRKKFLEAREV 688
Query: 248 KAEMVHKGILPDADTYE 264
+M +G+ D + ++
Sbjct: 689 FDQMRREGLAADKEIFD 705
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 99/251 (39%), Gaps = 53/251 (21%)
Query: 151 KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL-----RLE 205
KD D R + + D G +AR+V +M++ G SV + N + RL +
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A+ VFR E + +V +YN +I
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVI----------------------------------- 253
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+C R+ EA+ L M G +P+ +Y+ ++N Y G+ K + L + M K
Sbjct: 254 --HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK- 310
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
G P+ Y +II LC + + EA M G+ PD V Y T+I GFC+
Sbjct: 311 -------GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 386 ---IREPGKAY 393
IR K +
Sbjct: 364 RGDIRAASKFF 374
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 170/335 (50%), Gaps = 23/335 (6%)
Query: 76 RIREAEQVVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
++++A +V+D + TY L+ A C D V AM +L M +RG P+++++N
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
+V G+C +GR+ M P+ T+ ++ C G A K+L++M+
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 187 GFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
GFSPSV T+N LI R+ L A+ + M + P+ ++YN L+ FC KE ++
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC--KEKKMD 396
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+A E MV +G PD TY ++ LC ++ +A ++ ++ G SP TY ++
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
+ G+ KA L DEM K P +TY++++ GL G+ +EA+
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAK--------DLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 363 GMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKV 397
+G+ P+AV++ +++LG C+ R+ +A + V
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 186/402 (46%), Gaps = 48/402 (11%)
Query: 31 PPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTY 90
P +IRGF +G +++K E+L E V + TY
Sbjct: 139 PCTTLIRGFCRLG----KTRKAAKILEIL-------------------EGSGAVPDVITY 175
Query: 91 NALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQ 150
N ++ YC ++ A+ +L M+ + P+++++N +++ LC G++ M Q
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 151 KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLED 206
+D PD TYT LI C G A K+L EM D G +P V TYN L+ + RL++
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKL-KEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A+ M P+V+T+N ++ C + D EK A+M+ KG P T+
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL---ADMLRKGFSPSVVTFNI 349
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
LI LC + L A D+ +M + G PN+ +Y L++ + E + +A + M +G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
P VT YN ++ LC G+ E+A+ +L + G SP ++Y TVI G +
Sbjct: 410 CYPDIVT--------YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 386 IREPGKAYELKVEVDENMISWLGIWGLFEDTRKSLMQGLSNE 427
+ GKA +L E+ + I T SL+ GLS E
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTI------TYSSLVGGLSRE 497
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 17/296 (5%)
Query: 103 VDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTS 162
++E L M G P++I +++G C G+ + PD TY
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 163 LIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERD 218
+I +C G A VL M SP V TYN ++R L +L+ A+ V M +RD
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 219 LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE 278
PDV+TY LI C ++ + A ++ EM +G PD TY L+ +C + RL E
Sbjct: 235 CYPDVITYTILIEATC--RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSH 338
A +M G PN T+ ++ + G++ A L +M K GFSPS
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK--------GFSPSV 344
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
VT+N +I LC G A+ +L MP+ G P+++SY ++ GFC+ ++ +A E
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 138/321 (42%), Gaps = 45/321 (14%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TYN LV C + R+DEA+ L M G +PN+I+ N +++ +C GR
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RR 201
M +K +P T+ LI+ C KG G+A +L +M G P+ +YN L+ +
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK-------------------------- 235
+++ A+ M R PD+VTYNT+++ CK
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 236 -------LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
K KA ++ EM K + PD TY L+ L + ++ EA F E R
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGL 348
G+ PN T+ +M Q +A M ++ G P+ +Y +I GL
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR--------GCKPNETSYTILIEGL 564
Query: 349 CLLGRAEEALGVLRGMPEIGL 369
G A+EAL +L + GL
Sbjct: 565 AYEGMAKEALELLNELCNKGL 585
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)
Query: 25 LRNRLSPP-----NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSV------S 73
+R+R P NV++ G G L K + ++ +G + V ++++ S
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN---DMPSSGCQPNVITHNIILRSMCS 321
Query: 74 GRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
R +AE+++ + T+N L+ C + A+ IL M + G +PN +S
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+N ++ G C + +M M + PD TY +++ C G A ++L+++
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 185 DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
G SP + TYN +I L + A+ + M +DL PD +TY++L+ + E
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR--EGK 499
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
+++A + E GI P+A T+ ++ LC ++ A D M+ G PN +YT
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFL 327
L+ EG +A L +E+ +KG +
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 38/218 (17%)
Query: 197 RLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE-----------------P 239
+++R LE+ M PD++ TLI FC+L + P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 240 DLE----------KAFEMKAEMV---HKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM 286
D+ KA E+ + + PD TY ++R+LC +L +A ++ M
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 287 LRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIY 346
L+ P+ TYT L+ A + A L DEM + G +P VTYN ++
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--------GCTPDVVTYNVLVN 282
Query: 347 GLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G+C GR +EA+ L MP G P+ +++ ++ C
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 236 LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
++ +LE+ F+ MV+ G +PD LIR C + +A + + G P+
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 296 ETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAE 355
TY +++ Y G+ + A + D M+ SP VTYN I+ LC G+ +
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS-----------VSPDVVTYNTILRSLCDSGKLK 221
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+A+ VL M + PD ++Y +I CR G A +L
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 170/345 (49%), Gaps = 34/345 (9%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+V + T+ ++ Y + +D A+ I M E G + +S N +V G C +GR+
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 143 XXXXXM-NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M NQ PD+ T+ +L++ C GH A +++ M+ G+ P V TYN +I
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 202 L----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
L +++AV V M RD SP+ VTYNTLIS CK E +E+A E+ + KGIL
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK--ENQVEEATELARVLTSKGIL 397
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
PD T+ LI+ LCL + A +LF EM G P+ TY L+++ +G+ +A ++
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 318 QDEM----------THKGFLPGF-----------------VTGFSPSHVTYNAIIYGLCL 350
+M T+ + GF V G S + VTYN +I GLC
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 351 LGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
R E+A ++ M G PD +Y +++ FCR + KA ++
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 162/373 (43%), Gaps = 34/373 (9%)
Query: 37 RGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR----------RIREAEQVVDE 86
+ FT V E + GA + + E G ++VS R+ +A + E
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284
Query: 87 TT----------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
+ T+N LV C V A+ I+ M + G P++ ++N+V+ GLC G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
+ M +D +P+ TY +LI C + +A ++ + G P V T+N
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 197 RLIRRLRLED----AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV 252
LI+ L L A+ +F M + PD TYN LI C + L++A M +M
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC--SKGKLDEALNMLKQME 462
Query: 253 HKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFS 312
G TY LI C + EA ++F EM GVS N+ TY L++ +
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 313 KAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
A L D+M + G P TYN+++ C G ++A +++ M G PD
Sbjct: 523 DAAQLMDQM--------IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 373 AVSYCTVILGFCR 385
V+Y T+I G C+
Sbjct: 575 IVTYGTLISGLCK 587
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 171/389 (43%), Gaps = 31/389 (7%)
Query: 33 NVIIRGFTAVG------NLQSESKKVGGAF-------ELLKAGTEKGVESNSVSGRRIRE 79
NVI+ GF G N E G F L+ + G +++ +
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 80 AEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
E + TYN+++ C V EA+ +L M R PN +++N ++ LC + ++
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI 199
+ K + PD T+ SLI C + A ++ EM G P TYN LI
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 200 RRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
L +L++A+ + + M + V+TYNTLI FCK + +A E+ EM G
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT--REAEEIFDEMEVHG 500
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
+ ++ TY LI LC +R+ +A L +M+ G P+ TY L+ + G KA
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRG--MPEIGLSPDA 373
+ MT G P VTY +I GLC GR E A +LR M I L+P A
Sbjct: 561 DIVQAMTSNGC--------EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Query: 374 VSYCTVILGFCRIREPGKAYELKVEVDEN 402
Y VI G R R+ +A L E+ E
Sbjct: 613 --YNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 169/348 (48%), Gaps = 19/348 (5%)
Query: 67 VESNSVSGRRIREAEQVV----DETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNL 122
V+ NS+ I A+ V + +T+N L+ A C ++ A+ +L M GL P+
Sbjct: 165 VDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDE 224
Query: 123 ISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSE 182
+F V+QG +G + M + + + ++H FC +G A + E
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284
Query: 183 MIDS-GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLK 237
M + GF P T+N L+ L ++ A+ + M + PDV TYN++IS CKL
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 238 EPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNET 297
E +++A E+ +M+ + P+ TY LI TLC + ++ EA +L R + G+ P+ T
Sbjct: 345 E--VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 298 YTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEA 357
+ L+ + A L +EM KG P TYN +I LC G+ +EA
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGC--------EPDEFTYNMLIDSLCSKGKLDEA 454
Query: 358 LGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMIS 405
L +L+ M G + ++Y T+I GFC+ + +A E+ E++ + +S
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 169/402 (42%), Gaps = 75/402 (18%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVE------SNSVSGR----RIREAEQ 82
N ++ G G+ V A E++ ++G + ++ +SG ++EA +
Sbjct: 299 NTLVNGLCKAGH-------VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 83 VVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC 133
V+D+ T TYN L+ C + +V+EA + R +T +G+ P++ +FN+++QGLC
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 134 GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVA 193
M K PDE TY LI C KG +A +L +M SG + SV
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 194 TYNRLI---------------------------------------RRLRLEDAVGVFRGM 214
TYN LI + R+EDA + M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
PD TYN+L++ FC+ D++KA ++ M G PD TY LI LC
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCR--GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
R+ A L R + G++ Y ++ + + ++A +L EM + P
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP------ 643
Query: 335 SPSHVTYNAIIYGLCL-LGRAEEALGVLRGMPEIGLSPDAVS 375
P V+Y + GLC G EA+ L + E G P+ S
Sbjct: 644 -PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSS 684
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 18/252 (7%)
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDS-GFSPSVATYNRLIRRLRLEDAVGVFR----G 213
T+ LI + + V+ MID G P YNR++ L +++ +
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK 179
Query: 214 MTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQ 273
M+ + PDV T+N LI C+ + L A M +M G++PD T+ +++ +
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQ--LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 274 QRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTG 333
L A + +M+ +G S +N + +++ + EG+ A + EM+++ G
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD-------G 290
Query: 334 FSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAY 393
F P T+N ++ GLC G + A+ ++ M + G PD +Y +VI G C++ E +A
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA- 349
Query: 394 ELKVEVDENMIS 405
VEV + MI+
Sbjct: 350 ---VEVLDQMIT 358
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 164/325 (50%), Gaps = 23/325 (7%)
Query: 74 GRRIREAEQVVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
G R +EA +VD YN ++ C + ++ A+ + CM ++G++ + ++
Sbjct: 162 GNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 221
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+N ++ GL GR M ++ + P+ +T+LI F +G+ +AR + EMI
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 185 DSGFSPSVATYNRLIRRLRLE----DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
P+V TYN LI + DA +F M + PDVVTYNTLI+ FCK K
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR-- 339
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
+E ++ EM ++G++ DA TY LI C +L+ A +F M+ GVSP+ TY
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
L++ G+ KA + +++ + +TYN II GLC + +EA +
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQK--------SEMDVDIITYNIIIQGLCRTDKLKEAWCL 451
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCR 385
R + G+ PDA++Y T+I G CR
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCR 476
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 139/302 (46%), Gaps = 14/302 (4%)
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYT 161
+ D+A + M + P+++ F V+ + + M ++ D ++T
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 162 SLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTER 217
LIH FC A +L +M+ GF PS+ T L+ R ++AV + M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
P+VV YNT+I+ C K DL A E+ M KGI DA TY LI L R +
Sbjct: 179 GFVPNVVIYNTVINGLC--KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
+A L R+M++ + PN +T L++ + EG +A +L EM + +P
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV------- 289
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKV 397
TYN++I G C+ G +A + M G PD V+Y T+I GFC+ + +L
Sbjct: 290 -FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 398 EV 399
E+
Sbjct: 349 EM 350
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 147/334 (44%), Gaps = 55/334 (16%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
PNV+I + V N +++ + A E+ +KG+ +++V TYN
Sbjct: 182 PNVVI--YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV----------------TYN 223
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
L+ R +A +LR M +R + PN+I F A++ +G + M ++
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDA 207
+ P+ TY SLI+ FC G G A+ + M+ G P V TYN LI + R+ED
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKE-----------------PDL--------- 241
+ +F MT + L D TYNTLI +C+ + PD+
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 242 -------EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
EKA M ++ + D TY +I+ LC +L EA+ LFR + R GV P+
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
Y +++ +G +A L M GF+P
Sbjct: 464 AIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 19/303 (6%)
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGH 172
M + G +P++++ +++ G C R M+ P+ Y ++I+ C
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNT 228
A +V M G TYN LI L R DA + R M +R + P+V+ +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 229 LISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
LI F +KE +L +A + EM+ + ++P+ TY LI C+ L +A +F M+
Sbjct: 260 LIDTF--VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGL 348
G P+ TY L+ + + L EMT++G + TYN +I+G
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV--------GDAFTYNTLIHGY 369
Query: 349 CLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL-----KVEVDENM 403
C G+ A V M + G+SPD V+Y ++ C + KA + K E+D ++
Sbjct: 370 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 429
Query: 404 ISW 406
I++
Sbjct: 430 ITY 432
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 118/236 (50%), Gaps = 8/236 (3%)
Query: 67 VESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
+E+ ++ IR + VV TYN+L+ +C + +A + M +G P+++++N
Sbjct: 271 LEARNLYKEMIRRS--VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
++ G C R+ M + L D TY +LIH +C G A+KV + M+D
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 388
Query: 187 GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
G SP + TYN L+ L ++E A+ + + + ++ D++TYN +I C+ + L+
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK--LK 446
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETY 298
+A+ + + KG+ PDA Y +I LC + EA L R M G P+ Y
Sbjct: 447 EAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 14/186 (7%)
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
+ AF + EM+ +P + ++ + + L+ +M G+S + ++T
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
L++ F + L + G + GF PS VT +++ G C R +EA+ +
Sbjct: 120 LIHC------FCRCSRLSLALALLGKMMKL--GFRPSIVTLGSLLNGFCQGNRFQEAVSL 171
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFEDTRKSL 420
+ M G P+ V Y TVI G C+ R+ A E+ +++ I + T +L
Sbjct: 172 VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV------TYNTL 225
Query: 421 MQGLSN 426
+ GLSN
Sbjct: 226 ISGLSN 231
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 165/317 (52%), Gaps = 14/317 (4%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YN ++ C + +D+A+ + + M +G++PN++++++++ LC GR M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
++ + PD T+++LI F +G +A K+ EM+ PS+ TY+ LI RL+
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+A +F M + PDVVTYNTLI FCK K +E+ E+ EM +G++ + TY
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR--VEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
LI+ L A ++F+EM+ GV PN TY L++ G+ KA + + +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-- 494
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
+ P+ TYN +I G+C G+ E+ + + G+ PD V+Y T+I GFCR
Sbjct: 495 ------SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 386 IREPGKAYELKVEVDEN 402
+A L E+ E+
Sbjct: 549 KGSKEEADALFKEMKED 565
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 164/336 (48%), Gaps = 20/336 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY+ L+ +C ++ A+ +L M + G +PN+++ ++++ G C R+ M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
P+ T+ +LIH +A ++ M+ G P + TY N L +R
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ A + M + L P V+ YNT+I CK K D A + EM KGI P+ TY
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD--DALNLFKEMETKGIRPNVVTYS 295
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI LC R S+A L +M+ ++P+ T++ L++A+ EG+ +A L DEM +
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
PS VTY+++I G C+ R +EA + M PD V+Y T+I GFC
Sbjct: 356 --------SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 385 RIREPGKAYELKVEVDE-----NMISW-LGIWGLFE 414
+ + + E+ E+ + N +++ + I GLF+
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 15/264 (5%)
Query: 76 RIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
++ EAE++ DE TY++L+ +C +R+DEA + M + P+++++N
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
+++G C R+ M+Q+ L + TY LI G A+++ EM+
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 187 GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
G P++ TYN L+ L +LE A+ VF + + P + TYN +I CK + +E
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK--VE 518
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+++ + KG+ PD Y +I C + EA LF+EM G PN+ Y L+
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGF 326
A +G + L EM GF
Sbjct: 579 RARLRDGDREASAELIKEMRSCGF 602
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 16/253 (6%)
Query: 76 RIREAEQVVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
R+ EA+Q+ + + TYN L+ +C +RV+E M + R M++RGL N +++N
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
++QGL G M + P+ TY +L+ C G KA V + S
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 187 GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
P++ TYN +I + ++ED +F ++ + + PDVV YNT+IS FC+ + E
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR--KGSKE 553
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+A + EM G LP++ Y LIR + +L +EM G + + T GL+
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLV 612
Query: 303 NAYRIEGQFSKAF 315
+G+ K+F
Sbjct: 613 TNMLHDGRLDKSF 625
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 10/197 (5%)
Query: 199 IRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
+ L+L+DAV +F M + P ++ ++ L+S K+ + D+ + +M + GI
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV--VISLGEQMQNLGIPH 114
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
+ TY LI C + +L A + +M++ G PN T + L+N Y + S+A L
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
D+M FVTG+ P+ VT+N +I+GL L +A EA+ ++ M G PD V+Y
Sbjct: 175 DQM--------FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 379 VILGFCRIREPGKAYEL 395
V+ G C+ + A+ L
Sbjct: 227 VVNGLCKRGDTDLAFNL 243
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 162/332 (48%), Gaps = 23/332 (6%)
Query: 74 GRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
G+RI EA +VD+ T T+N L+ + EA+ ++ M RG +P+L +
Sbjct: 163 GKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFT 222
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+ VV GLC +G + M + + D YT++I C+ + A + +EM
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 185 DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
+ G P+V TYN LIR L R DA + M ER ++P+VVT++ LI F +KE
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF--VKEGK 340
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
L +A ++ EM+ + I PD TY LI C+ RL EA +F M+ PN TY
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
L+ + + + L EM+ +G + + VTYN +I GL G + A +
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLV--------GNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCRIREPGKA 392
+ M G+ PD ++Y ++ G C+ + KA
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 160/311 (51%), Gaps = 14/311 (4%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E ++ + Y ++ A C + V++A+ + M +G++PN++++N++++ LC GR
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M ++ + P+ T+++LI F +G +A K+ EMI P + TY+ L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I RL++A +F M +D P+VVTYNTLI FCK K +E+ E+ EM +
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR--VEEGMELFREMSQR 424
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G++ + TY LI+ L A +F++M+ GV P+ TY+ L++ G+ KA
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ + + + P TYN +I G+C G+ E+ + + G+ P+ +
Sbjct: 485 LVVFEYLQK--------SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 375 SYCTVILGFCR 385
Y T+I GFCR
Sbjct: 537 IYTTMISGFCR 547
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 166/336 (49%), Gaps = 20/336 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+YN L+ +C ++ A+ +L M + G +P++++ ++++ G C R+ M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
+ P+ T+ +LIH +A ++ M+ G P + TY N L +R +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ A+ + + M + + DVV Y T+I C K ++ A + EM +KGI P+ TY
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYK--NVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LIR LC R S+A L +M+ ++PN T++ L++A+ EG+ +A L DEM +
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P TY+++I G C+ R +EA + M P+ V+Y T+I GFC
Sbjct: 355 --------SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 385 RIREPGKAYELKVEVDE-----NMISW-LGIWGLFE 414
+ + + EL E+ + N +++ I GLF+
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 154/337 (45%), Gaps = 37/337 (10%)
Query: 19 LRLSTCLRNRLSPPNVI-----IRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS 73
L L T + N+ PNV+ IR G S+ LL E+ + N V+
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR-------LLSDMIERKINPNVVT 327
Query: 74 GR----------RIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMT 114
++ EAE++ DE TY++L+ +C +R+DEA + M
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
+ PN++++N +++G C R+ M+Q+ L + TY +LI G
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 175 KARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLI 230
A+K+ +M+ G P + TY+ L+ L +LE A+ VF + + + PD+ TYN +I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
CK + +E +++ + KG+ P+ Y +I C + EA LFREM G
Sbjct: 508 EGMCKAGK--VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
PN+ TY L+ A +G + + L EM GF+
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 161/379 (42%), Gaps = 61/379 (16%)
Query: 39 FTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYC 98
+T + + K V A L KG+ N V TYN+L+ C
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV----------------TYNSLIRCLC 301
Query: 99 CDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDER 158
R +A +L M ER + PN+++F+A++ +G++ M ++ + PD
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGM 214
TY+SLI+ FC +A+ + MI P+V TYN LI+ R+E+ + +FR M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 215 TERDLSPDVVTYNTLISKF-----CKLKE------------PD----------------L 241
++R L + VTYNTLI C + + PD L
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
EKA + + + PD TY +I +C ++ + +DLF + GV PN YT +
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 302 MNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVL 361
++ + +G +A L EM G LP +G TYN +I G + ++
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPN--SG------TYNTLIRARLRDGDKAASAELI 593
Query: 362 RGMPEIGLSPDAVSYCTVI 380
+ M G DA + VI
Sbjct: 594 KEMRSCGFVGDASTISMVI 612
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 11/235 (4%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
TYN L+ +C +RV+E M + R M++RGL N +++N ++QGL G
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M + PD TY+ L+ C G KA V + S P + TYN +I +
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK--LKEPDLEKAFEMKAEMVHKGILPDA 260
++ED +F ++ + + P+V+ Y T+IS FC+ LKE +A + EM G LP++
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE----EADALFREMKEDGTLPNS 570
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
TY LIR + + +L +EM G + T + ++N +G+ K++
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH-DGRLEKSY 624
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 188 FSPSVATYNRLIRR-----LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
FS + Y + R L+L+DAV +F M + P +V +N L+S K+ + DL
Sbjct: 40 FSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDL- 98
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+ M + I D +Y LI C + +L A + +M++ G P+ T + L+
Sbjct: 99 -VISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLL 157
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
N Y + S+A L D+M FV + P+ VT+N +I+GL L +A EA+ ++
Sbjct: 158 NGYCHGKRISEAVALVDQM--------FVMEYQPNTVTFNTLIHGLFLHNKASEAVALID 209
Query: 363 GMPEIGLSPDAVSYCTVILGFCR 385
M G PD +Y TV+ G C+
Sbjct: 210 RMVARGCQPDLFTYGTVVNGLCK 232
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 30/289 (10%)
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTER----DLSPDVVTYNTLIS 231
A + EM+ S PS+ +N+L+ + + + + ER +S D+ +YN LI+
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
FC+ L A + +M+ G PD T L+ C +R+SEA L +M
Sbjct: 124 CFCR--RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
PN T+ L++ + + S+A L D M +G P TY ++ GLC
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC--------QPDLFTYGTVVNGLCKR 233
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD----------- 400
G + AL +L+ M + + D V Y T+I C + A L E+D
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 401 ENMISWLGIWGLFEDTRKSLMQGLS-----NEDTFSSLMNDYLAQDESV 444
++I L +G + D + L + N TFS+L++ ++ + + V
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 175/386 (45%), Gaps = 54/386 (13%)
Query: 51 KVGGAFELLKAGTEKGVESNSV----------SGRRIREAEQVVDET---------TTYN 91
K+ A L+K + GV N GR+ EAE + D TY+
Sbjct: 347 KIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYS 406
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
L+ +C ++D A+ L M + GLK ++ +N+++ G C G + M K
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDA 207
L P TYTSL+ +C KG KA ++ EM G +PS+ T+ L+ L + DA
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
V +F M E ++ P+ VTYN +I +C +E D+ KAFE EM KGI+PD +Y PLI
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYC--EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNET-YTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
LCL + SEA +F + L G NE YTGL++ + EG+ +A + EM +G
Sbjct: 585 HGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 327 LPGFVT---------------------------GFSPSHVTYNAIIYGLCLLGRAEEALG 359
V G P V Y ++I G +EA G
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCR 385
+ M G P+ V+Y VI G C+
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCK 729
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 150/342 (43%), Gaps = 36/342 (10%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YN L+ C ++V EA+GI + + + LKP+++++ +V GLC M
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
+P E +SL+ +G +A ++ ++D G SP++ YN LI L +
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+A +F M + L P+ VTY+ LI FC+ L+ A EMV G+ Y
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCR--RGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
LI C +S A EM+ + P TYT LM Y +G+ +KA L EMT KG
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 326 FLPGFVT---------------------------GFSPSHVTYNAIIYGLCLLGRAEEAL 358
P T P+ VTYN +I G C G +A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 359 GVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD 400
L+ M E G+ PD SY +I G C G+A E KV VD
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCL---TGQASEAKVFVD 601
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 167/363 (46%), Gaps = 42/363 (11%)
Query: 77 IREAEQVVDET---------TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNA 127
IR+A ++ +E TYN ++ YC + + +A L+ MTE+G+ P+ S+
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 128 VVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG 187
++ GLC G+ +++ + +E YT L+H FC +G +A V EM+ G
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 188 FSPSVATYNRLIR-RLRLEDA---VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEK 243
+ Y LI L+ +D G+ + M +R L PD V Y ++I K K D ++
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA--KSKTGDFKE 700
Query: 244 AFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMN 303
AF + M+++G +P+ TY +I LC ++EA L +M PN TY ++
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 304 AY-RIEGQFSKAFHLQDEM---------THKGFLPGFV-----------------TGFSP 336
+ E KA L + + T+ + GF G SP
Sbjct: 761 ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 337 SHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELK 396
+TY +I LC ++A+ + M E G+ PD V+Y T+I G C E GKA EL+
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELR 880
Query: 397 VEV 399
E+
Sbjct: 881 NEM 883
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 162/363 (44%), Gaps = 40/363 (11%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR----------RIREAEQ 82
NV+I G+ G++ AFE LK TEKG+ ++ S R + EA+
Sbjct: 546 NVMIEGYCEEGDMSK-------AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 83 VVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC 133
VD Y L+ +C + +++EA+ + + M +RG+ +L+ + ++ G
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 134 GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVA 193
M+ + L PD+ YTS+I G +A + MI+ G P+
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 194 TYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKA 249
TY +I L + +A + M P+ VTY + K E D++KA E+
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHN 777
Query: 250 EMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEG 309
++ KG+L + TY LIR C Q R+ EA +L M+ GVSP+ TYT ++N
Sbjct: 778 AIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 310 QFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGL 369
KA L + MT KG P V YN +I+G C+ G +A + M GL
Sbjct: 837 DVKKAIELWNSMTEKGI--------RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Query: 370 SPD 372
P+
Sbjct: 889 IPN 891
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 28/284 (9%)
Query: 21 LSTC--LRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIR 78
LS C + R +++ G G+L+ + +K+ F LLK ++G++ + V
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL--FFGLLKEMHDRGLKPDDV------ 683
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
Y +++ A EA GI M G PN +++ AV+ GLC G +
Sbjct: 684 ----------IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKV-LSEMIDSGFSPSVATYNR 197
M P++ TY + + KG + V L I G + ATYN
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 198 LIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH 253
LIR R+E+A + M +SPD +TY T+I++ C+ D++KA E+ M
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCR--RNDVKKAIELWNSMTE 850
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNET 297
KGI PD Y LI C+ + +A +L EMLR G+ PNN+T
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 130/324 (40%), Gaps = 80/324 (24%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----- 202
+ + L P+ RT ++L+H H G A ++ ++M+ G P V Y +IR L
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 203 ----------------------------------RLEDAVGVFRGMTERDLSPDVVTYNT 228
++ +AVG+ + + +DL PDVVTY T
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 229 LISKFCKLKEPD---------------------------------LEKAFEMKAEMVHKG 255
L+ CK++E + +E+A + +V G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
+ P+ Y LI +LC ++ EA LF M + G+ PN+ TY+ L++ + G+ A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVS 375
EM TG S YN++I G C G A G + M L P V+
Sbjct: 423 SFLGEMVD--------TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 376 YCTVILGFCRIREPGKAYELKVEV 399
Y +++ G+C + KA L E+
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEM 498
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 226 YNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFRE 285
++ LI + + + L+ K + +LP+ T L+ L + A +LF +
Sbjct: 159 FDLLIQHYVRSRRV-LDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 286 MLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAII 345
M+ G+ P+ YTG++ + S+A + M TG + V YN +I
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHME--------ATGCDVNIVPYNVLI 269
Query: 346 YGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMIS 405
GLC + EA+G+ + + L PD V+YCT++ G C+++E +E+ +E+ + M+
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE----FEIGLEMMDEMLC 325
Query: 406 WLGIWGLFEDTRKSLMQGLSNEDTFSSLMN 435
+ E SL++GL +N
Sbjct: 326 LR--FSPSEAAVSSLVEGLRKRGKIEEALN 353
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 183/379 (48%), Gaps = 32/379 (8%)
Query: 25 LRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEK-----GVESNSVSGR-RIR 78
+RN L N++I F + +G ++LK G E G N R R+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILG---KMLKLGYEPDRVTIGSLVNGFCRRNRVS 172
Query: 79 EAEQVVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVV 129
+A +VD + YNA++ + C +RV++A + + +G++PN++++ A+V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 130 QGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFS 189
GLC R M +K + P+ TY++L+ F G +A+++ EM+
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 190 PSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF 245
P + TY+ LI L R+++A +F M + DVV+YNTLI+ FCK K +E
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR--VEDGM 350
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY 305
++ EM +G++ + TY LI+ + +A + F +M +G+SP+ TY L+
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 306 RIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMP 365
G+ KA + ++M + VTY +I G+C G+ EEA + +
Sbjct: 411 CDNGELEKALVIFEDMQKR--------EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 366 EIGLSPDAVSYCTVILGFC 384
GL PD V+Y T++ G C
Sbjct: 463 LKGLKPDIVTYTTMMSGLC 481
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 162/314 (51%), Gaps = 14/314 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ T +LV +C RV +A+ ++ M E G KP+++++NA++ LC R+
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL----IRR 201
+ +K + P+ TYT+L++ C+ A ++LS+MI +P+V TY+ L ++
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
++ +A +F M + PD+VTY++LI+ C +++A +M MV KG L D
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL--HDRIDEANQMFDLMVSKGCLADVV 331
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+Y LI C +R+ + LFREM + G+ N TY L+ + G KA Q+
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA---QEFF 388
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+ F G SP TYN ++ GLC G E+AL + M + + D V+Y TVI
Sbjct: 389 SQMDFF-----GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 382 GFCRIREPGKAYEL 395
G C+ + +A+ L
Sbjct: 444 GMCKTGKVEEAWSL 457
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 124/290 (42%), Gaps = 64/290 (22%)
Query: 176 ARKVLSEMIDSGFSPSVATYNRL---IRRLRLEDAV-GVFRGMTERDLSPDVVTYNTLIS 231
A + S+M+ S PS+ +NRL I +L+ D V + + M + D+ T+N +I+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 232 KFC--------------KLK---EPD----------------LEKAFEMKAEMVHKGILP 258
FC LK EPD + A + +MV G P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
D Y +I +LC +R+++A+D F+E+ R G+ PN TYT L+N ++S A L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 319 DEMTHKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCLL 351
+M K P +T P VTY+++I GLCL
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
R +EA + M G D VSY T+I GFC+ + +L E+ +
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 15/227 (6%)
Query: 199 IRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
+R ++L DA+ +F M + P +V +N L+S KLK+ D+ + K E++ GI
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL--GIRN 118
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
D T+ +I C ++S A + +ML+ G P+ T L+N + + S A L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
D+M G+ P V YNAII LC R +A + + G+ P+ V+Y
Sbjct: 179 DKMVE--------IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 379 VILGFCRIREPGKAYEL-----KVEVDENMISWLGIWGLFEDTRKSL 420
++ G C A L K ++ N+I++ + F K L
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 24 CLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS---------- 73
CL + +S N +I GF ++K+V +L + +++G+ SN+V+
Sbjct: 326 CLADVVSY-NTLINGFC-------KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 74 GRRIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
+ +A++ + TYN L+ C + +++A+ I M +R + ++++
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+ V++G+C G++ ++ K L PD TYT+++ C KG + + ++M
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 185 DSGF 188
G
Sbjct: 498 QEGL 501
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 163/343 (47%), Gaps = 24/343 (6%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
T+ +L+ +C +RV +A+ + M G KPN++ +N ++ GLC ++
Sbjct: 152 VTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLR 203
M + + PD TY SLI C G A +++S M P V T+N LI + R
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
+ +A + M R L PD+VTY+ LI C L++A EM MV KG PD TY
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR--LDEAEEMFGFMVSKGCFPDVVTY 329
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
LI C +++ LF EM + GV N TYT L+ Y G+ + A + M
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
G P+ +TYN +++GLC G+ E+AL +L M + G+ D V+Y +I G
Sbjct: 390 --------CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 384 CRIREPGKAYELKVEVDENMISWLGIWGLFED--TRKSLMQGL 424
C+ E A+++ L GL D T ++M GL
Sbjct: 442 CKAGEVADAWDIYCS--------LNCQGLMPDIWTYTTMMLGL 476
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 179/376 (47%), Gaps = 32/376 (8%)
Query: 27 NRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVES------NSVSGRRIREA 80
+ L N+++ F L +G +++K G E + + G R+ +A
Sbjct: 114 HNLCTCNILLNCFCRCSQLSLALSFLG---KMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 81 EQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQG 131
+ D+ YN ++ C ++VD A+ +L M + G+ P+++++N+++ G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 132 LCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPS 191
LC GR M ++++ PD T+ +LI +G +A + EMI P
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 192 VATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM 247
+ TY+ LI L RL++A +F M + PDVVTY+ LI+ +CK K+ +E ++
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK--VEHGMKL 348
Query: 248 KAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRI 307
EM +G++ + TY LI+ C +L+ A ++FR M+ GV PN TY L++
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 308 EGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEI 367
G+ KA + +M G VTYN II G+C G +A + +
Sbjct: 409 NGKIEKALVILADMQK--------NGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 368 GLSPDAVSYCTVILGF 383
GL PD +Y T++LG
Sbjct: 461 GLMPDIWTYTTMMLGL 476
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 161/345 (46%), Gaps = 32/345 (9%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
PNV+I + + + +SK+V A +LL + G+ + V TYN
Sbjct: 184 PNVVI--YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV----------------TYN 225
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
+L+ C R +A ++ CMT+R + P++ +FNA++ +GR+ M ++
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDA 207
L PD TY+ LI+ C +A ++ M+ G P V TY+ LI + ++E
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ +F M++R + + VTY LI +C+ + L A E+ MV G+ P+ TY L+
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGK--LNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
LC ++ +A + +M + G+ + TY ++ G+ + A+ + + +G +
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
P TY ++ GL G EA + R M E G+ P+
Sbjct: 464 PDI--------WTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 140/304 (46%), Gaps = 14/304 (4%)
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYT 161
++D+++ + M + P++ F+ ++ + + M + + T
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 162 SLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTER 217
L++ FC A L +MI G PS+ T+ L+ R R+ DA+ +F M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
P+VV YNT+I CK K+ D A ++ M GI PD TY LI LC R S
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVD--NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
+A + M + + P+ T+ L++A EG+ S+A +EM + P
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL--------DPD 290
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKV 397
VTY+ +IYGLC+ R +EA + M G PD V+Y +I G+C+ ++ +L
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 398 EVDE 401
E+ +
Sbjct: 351 EMSQ 354
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 199 IRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
IR ++L+D++ +F M + P + ++ L+S K+K+ D+ + +M+ GI
Sbjct: 57 IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML--GIPH 114
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
+ T L+ C +LS A +M++ G P+ T+ L+N + + A ++
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
D+M G+ P+ V YN II GLC + + AL +L M + G+ PD V+Y +
Sbjct: 175 DQMVG--------MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 379 VILGFC 384
+I G C
Sbjct: 227 LISGLC 232
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 14/191 (7%)
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
L+ + ++ MV LP + L+ + ++ L+ +M G+ N T
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
L+N + Q S A +M G PS VT+ +++ G C R +AL +
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIK--------LGHEPSIVTFGSLLNGFCRGDRVYDALYM 173
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFEDTRKSL 420
M +G P+ V Y T+I G C+ ++ A +L ++++ I G T SL
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI------GPDVVTYNSL 227
Query: 421 MQGLSNEDTFS 431
+ GL + +S
Sbjct: 228 ISGLCSSGRWS 238
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 155/301 (51%), Gaps = 14/301 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY L+ A + VDEA+ ++ M RGLKP++ ++N +++G+C +G + +
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
K PD +Y L+ ++G + K++++M P+V TY+ LI L ++
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 349
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
E+A+ + + M E+ L+PD +Y+ LI+ FC +E L+ A E M+ G LPD Y
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFC--REGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
++ TLC + +A ++F ++ G SPN+ +Y + +A G +A H+ EM
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G P +TYN++I LC G +EA +L M P V+Y V+LGFC
Sbjct: 468 --------GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Query: 385 R 385
+
Sbjct: 520 K 520
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 156/319 (48%), Gaps = 14/319 (4%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YNAL+ +C R+D+A +L M + P+ +++N ++ LC +G++ +
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
+ P TYT LI +G +A K++ EM+ G P + TYN +IR + ++
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A + R + + PDV++YN L+ L + E+ ++ +M + P+ TY
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRAL--LNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
LI TLC ++ EA +L + M G++P+ +Y L+ A+ EG+ A + M G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
LP V YN ++ LC G+A++AL + + E+G SP++ SY T+
Sbjct: 399 CLPDI--------VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 386 IREPGKAYELKVEVDENMI 404
+ +A + +E+ N I
Sbjct: 451 SGDKIRALHMILEMMSNGI 469
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 144/297 (48%), Gaps = 15/297 (5%)
Query: 103 VDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTS 162
+ +A+ ++ + + G +P++ ++NA++ G C R+ M KD +PD TY
Sbjct: 140 IPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 163 LIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE----DAVGVFRGMTERD 218
+I C +G A KVL++++ P+V TY LI LE +A+ + M R
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 219 LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE 278
L PD+ TYNT+I C KE +++AFEM + KG PD +Y L+R L Q + E
Sbjct: 259 LKPDMFTYNTIIRGMC--KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSH 338
L +M PN TY+ L+ +G+ +A +L M K G +P
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK--------GLTPDA 368
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+Y+ +I C GR + A+ L M G PD V+Y TV+ C+ + +A E+
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 147/325 (45%), Gaps = 32/325 (9%)
Query: 21 LSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR----- 75
LS L+ + N IIRG G V AFE+++ KG E + +S
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEG-------MVDRAFEMVRNLELKGCEPDVISYNILLRA 307
Query: 76 -----RIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPN 121
+ E E+++ + TY+ L+ C D +++EAM +L+ M E+GL P+
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
Query: 122 LISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLS 181
S++ ++ C +GR+ M PD Y +++ C G +A ++
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427
Query: 182 EMIDSGFSPSVATYNRLIRRLRLED----AVGVFRGMTERDLSPDVVTYNTLISKFCKLK 237
++ + G SP+ ++YN + L A+ + M + PD +TYN++IS C +
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC--R 485
Query: 238 EPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNET 297
E +++AFE+ +M P TY ++ C R+ +A ++ M+ G PN T
Sbjct: 486 EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETT 545
Query: 298 YTGLMNAYRIEGQFSKAFHLQDEMT 322
YT L+ G ++A L +++
Sbjct: 546 YTVLIEGIGFAGYRAEAMELANDLV 570
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 164/328 (50%), Gaps = 14/328 (4%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
EA ++ + +N ++ + C VD+A+ + + M +G++PN++++++++ LC GR
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M +K + P+ T+ +LI F +G +A K+ +MI P + TYN L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
+ RL+ A +F M +D PDVVTYNTLI FCK K +E E+ EM H+
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR--VEDGTELFREMSHR 429
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G++ D TY LI+ L A +F++M+ GV P+ TY+ L++ G+ KA
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ D M + Y +I G+C G+ ++ + + G+ P+ V
Sbjct: 490 LEVFDYMQK--------SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 375 SYCTVILGFCRIREPGKAYELKVEVDEN 402
+Y T+I G C R +AY L ++ E+
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKED 569
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 168/352 (47%), Gaps = 24/352 (6%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
++V TYN L+ +C ++ A+ +L M + G +P++++ ++++ G C R+
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NR 197
M + PD T+T+LIH +A ++ M+ G P++ TY N
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 198 LIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
L +R + A+ + M + DVV +NT+I CK + D A + EM KGI
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD--DALNLFKEMETKGIR 292
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
P+ TY LI LC R S+A L +M+ ++PN T+ L++A+ EG+F +A L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
D+M + P TYN+++ G C+ R ++A + M PD V+Y
Sbjct: 353 YDDMIKR--------SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 378 TVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFED--TRKSLMQGLSNE 427
T+I GFC+ + EL E+ GL D T +L+QGL ++
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHR--------GLVGDTVTYTTLIQGLFHD 448
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 166/370 (44%), Gaps = 58/370 (15%)
Query: 74 GRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
G+RI +A +VD+ T T+ L+ + EA+ ++ M +RG +PNL++
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 125 FNAVVQGLCGKG-----------------------------------RMXXXXXXXXXMN 149
+ VV GLC +G + M
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLE 205
K + P+ TY+SLI C G A ++LS+MI+ +P++ T+N LI + +
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+A ++ M +R + PD+ TYN+L++ FC L+KA +M MV K PD TY
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFC--MHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
LI+ C +R+ + +LFREM G+ + TYT L+ +G A K
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA--------QKV 457
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
F G P +TY+ ++ GLC G+ E+AL V M + + D Y T+I G C+
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 386 IREPGKAYEL 395
+ ++L
Sbjct: 518 AGKVDDGWDL 527
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 150/313 (47%), Gaps = 27/313 (8%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR----------RIREAE 81
PNV+ ++++ + + A +LL EK + N V+ + EAE
Sbjct: 293 PNVVT--YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 82 QVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
++ D+ TYN+LV +C +R+D+A + M + P+++++N +++G
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C R+ M+ + L D TYT+LI G A+KV +M+ G P +
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
TY+ L+ L +LE A+ VF M + ++ D+ Y T+I CK + D +++
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD--DGWDLF 528
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
+ KG+ P+ TY +I LC ++ L EAY L ++M G PN+ TY L+ A+ +
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRD 588
Query: 309 GQFSKAFHLQDEM 321
G + + L EM
Sbjct: 589 GDKAASAELIREM 601
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 68/230 (29%)
Query: 187 GFSPSVATYNRLIRR----LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
FS Y ++R ++L+DA+G+F GM + P +V +N L+S K+K+ D+
Sbjct: 45 AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV 104
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+ K QRL + L+ TY L+
Sbjct: 105 ISLGEK------------------------MQRLEIVHGLY-------------TYNILI 127
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVT---------------------------GFS 335
N + Q S A L +M G+ P VT G+
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 336 PSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
P +T+ +I+GL L +A EA+ ++ M + G P+ V+Y V+ G C+
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 48/105 (45%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
Y ++ C +VD+ + ++ +G+KPN++++N ++ GLC K + M
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
+ P+ TY +LI G + +++ EM F +T
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 154/315 (48%), Gaps = 14/315 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY L+ C +ER+DEA+ +L M G P+ + +N ++ GLC KG + M
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
K P+E TY +LIH C KG KA +L M+ S P+ TY N L+++ R
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
DAV + M ER + Y+ LIS KE E+A + +M KG P+ Y
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGL--FKEGKAEEAMSLWRKMAEKGCKPNIVVYS 401
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
L+ LC + + +EA ++ M+ G PN TY+ LM + G +A + EM
Sbjct: 402 VLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK- 460
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
TG S + Y+ +I GLC +GR +EA+ V M IG+ PD V+Y ++I G C
Sbjct: 461 -------TGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
Query: 385 RIREPGKAYELKVEV 399
I A +L E+
Sbjct: 514 GIGSMDAALKLYHEM 528
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 133/288 (46%), Gaps = 14/288 (4%)
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
+ PN +SFN V++ LC + M ++ PD TY +L+ C + +A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 178 KVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
+L EM G SPS YN LI ++ L + M + P+ VTYNTLI
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
C + L+KA + MV +P+ TY LI L Q+R ++A L M G
Sbjct: 303 CL--KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
N Y+ L++ EG+ +A L +M KG P+ V Y+ ++ GLC G+
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC--------KPNIVVYSVLVDGLCREGK 412
Query: 354 AEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
EA +L M G P+A +Y +++ GF + +A ++ E+D+
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 21/319 (6%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAF------------ELLKAGTEKGVESNSVSGRRIREA 80
NV+I G G+L +K V F L+ KG +VS +
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
+ + TY L+ R +A+ +L M ERG N ++ ++ GL +G+
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M +K P+ Y+ L+ C +G P +A+++L+ MI SG P+ TY+ L++
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 201 RL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
E+AV V++ M + S + Y+ LI C + +++A + ++M+ GI
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR--VKEAMMVWSKMLTIGI 498
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREML---RWGVSPNNETYTGLMNAYRIEGQFSK 313
PD Y +I+ LC + A L+ EML P+ TY L++ ++ S+
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISR 558
Query: 314 AFHLQDEMTHKGFLPGFVT 332
A L + M +G P +T
Sbjct: 559 AVDLLNSMLDRGCDPDVIT 577
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 29/278 (10%)
Query: 157 ERTYTSLIHLFCDKGHPGKARKVLSEMIDS-GFSPSVATYNRLI----------RRLRLE 205
ER++ + + P KA + M+D SV ++N ++ R L
Sbjct: 112 ERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 171
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
D V ++SP+ +++N +I CKL+ D +A E+ M + LPD TY
Sbjct: 172 DYV--VNSNMNMNISPNGLSFNLVIKALCKLRFVD--RAIEVFRGMPERKCLPDGYTYCT 227
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
L+ LC ++R+ EA L EM G SP+ Y L++ +G ++ L D M
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM---- 283
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
F+ G P+ VTYN +I+GLCL G+ ++A+ +L M P+ V+Y T+I G +
Sbjct: 284 ----FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 386 IREPGKAYELKVEVDE------NMISWLGIWGLFEDTR 417
R A L ++E I + I GLF++ +
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 9/222 (4%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
Y+ L+ + + +EAM + R M E+G KPN++ ++ +V GLC +G+ M
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
P+ TY+SL+ F G +A +V EM +G S + Y+ LI L R++
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK---GILPDADT 262
+A+ V+ M + PD V Y+++I C + D A ++ EM+ + PD T
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD--AALKLYHEMLCQEEPKSQPDVVT 542
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNA 304
Y L+ LC+Q+ +S A DL ML G P+ T +N
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 28/177 (15%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM- 148
Y+ L+ C RV EAM + M G+KP+ ++++++++GLCG G M M
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 149 --NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN---------- 196
+ PD TY L+ C + +A +L+ M+D G P V T N
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
Query: 197 ---------------RLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE 238
RL++R R+ A + M + L+P T+ ++ + CK K+
Sbjct: 590 NSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKK 646
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 168/360 (46%), Gaps = 34/360 (9%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+T T++ L+ C + RV EA+ ++ M E G KP LI+ NA+V GLC G++
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M + P+E TY ++ + C G A ++L +M + Y+ +I L
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
L++A +F M + D++ Y TLI FC D ++ +M+ + I PD
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD--DGAKLLRDMIKRKITPDVV 318
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+ LI + +L EA +L +EM++ G+SP+ TYT L++ + E Q KA H+ D M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 322 THKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCLLGRA 354
KG P T G VTYN +I G C LG+
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISW-LGIWGLF 413
E A + + M + PD VSY ++ G C EP KA E+ +++++ + +GI+ +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 158/360 (43%), Gaps = 42/360 (11%)
Query: 76 RIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
R+ EA ++VD T NALV C + +V +A+ ++ M E G +PN +++
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
V++ +C G+ M ++ + D Y+ +I C G A + +EM
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 187 GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
GF + Y LIR R +D + R M +R ++PDVV ++ LI C +KE L
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID--CFVKEGKLR 334
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+A E+ EM+ +GI PD TY LI C + +L +A + M+ G PN T+ L+
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVT------GFS--------------------- 335
N Y L +M+ +G + VT GF
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 336 PSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
P V+Y ++ GLC G E+AL + + + + D Y +I G C + A++L
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 152/303 (50%), Gaps = 22/303 (7%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ Y L+ +C R D+ +LR M +R + P++++F+A++ +G++
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RR 201
M Q+ ++PD TYTSLI FC + KA +L M+ G P++ T+N LI +
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
++D + +FR M+ R + D VTYNTLI FC+L + LE A E+ EMV + + PD
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK--LEVAKELFQEMVSRRVRPDIV 458
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREM----LRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
+Y+ L+ LC +A ++F ++ + + N G+ NA +++ A+ L
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD----DAWDL 514
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
F + G P TYN +I GLC G EA + R M E G SP+ +Y
Sbjct: 515 --------FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 378 TVI 380
+I
Sbjct: 567 ILI 569
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 173/385 (44%), Gaps = 22/385 (5%)
Query: 5 HKSMLLTRPNPMKLLRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTE 64
HK L+T + L CL ++S ++I G Q G +LK +
Sbjct: 173 HKPTLIT----LNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYG---PVLKVMCK 224
Query: 65 KGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
G + ++ R E ++ + Y+ ++ C D +D A + M +G K ++I
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+ +++G C GR M ++ + PD +++LI F +G +A ++ EMI
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 185 DSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
G SP TY LI + +L+ A + M + P++ T+N LI+ +CK D
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
E+ +M +G++ D TY LI+ C +L A +LF+EM+ V P+ +Y
Sbjct: 405 --DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
L++ G+ KA + +++ + YN II+G+C + ++A +
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEK--------SKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCR 385
+P G+ PD +Y +I G C+
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCK 539
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 131/264 (49%), Gaps = 15/264 (5%)
Query: 76 RIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
++REAE++ E T TY +L+ +C + ++D+A +L M +G PN+ +FN
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
++ G C + M+ + + D TY +LI FC+ G A+++ EM+
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 187 GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
P + +Y L+ L E A+ +F + + + D+ YN +I C + D
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD-- 509
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
A+++ + KG+ PD TY +I LC + LSEA LFR+M G SPN TY L+
Sbjct: 510 DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGF 326
A+ EG +K+ L +E+ GF
Sbjct: 570 RAHLGEGDATKSAKLIEEIKRCGF 593
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 14/229 (6%)
Query: 176 ARKVLSEMIDSGFSPSVATYNRL---IRRLRLEDAV-GVFRGMTERDLSPDVVTYNTLIS 231
A + EM S P + ++RL + R + D V + + M + ++ ++ T + +I+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
C+ ++ L AF +++ G PD T+ LI LCL+ R+SEA +L M+ G
Sbjct: 116 CCCRCRKLSL--AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
P T L+N + G+ S A L D M TGF P+ VTY ++ +C
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVE--------TGFQPNEVTYGPVLKVMCKS 225
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD 400
G+ A+ +LR M E + DAV Y +I G C+ A+ L E++
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR----------------- 75
N +I+GF +G L+ A EL + + V + VS +
Sbjct: 426 NTLIQGFCELGKLEV-------AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 76 ---RIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+I +++ +D YN ++ C +VD+A + + +G+KP++ ++N ++ GL
Sbjct: 479 IFEKIEKSKMELD-IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C KG + M + +P+ TY LI +G K+ K++ E+ GFS
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDA 597
Query: 193 ATYNRLIRRL 202
+T ++ L
Sbjct: 598 STVKMVVDML 607
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 27/150 (18%)
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+Y +R+ + + +A DLF+EM R P ++ L + Q+ L +M
Sbjct: 39 SYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM 98
Query: 322 THKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCLLGRA 354
KG T G+ P VT++ +I GLCL GR
Sbjct: 99 ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRV 158
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
EAL ++ M E+G P ++ ++ G C
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLC 188
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 164/328 (50%), Gaps = 14/328 (4%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E ++ + Y+ ++ + C VD+A+ + M +G++P++ ++++++ LC GR
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M ++ + P+ T+ SLI F +G +A K+ EMI P++ TYN L
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I RL++A +F M +D PDVVTYNTLI+ FCK K+ + E+ +M +
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK--VVDGMELFRDMSRR 409
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G++ + TY LI A +F++M+ GV PN TY L++ G+ KA
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ + + + P TYN + G+C G+ E+ + + G+ PD +
Sbjct: 470 MVVFEYLQK--------SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 375 SYCTVILGFCRIREPGKAYELKVEVDEN 402
+Y T+I GFC+ +AY L +++ E+
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKED 549
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 152/311 (48%), Gaps = 14/311 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN ++ C ++ A+ IL M + G P++++ N+++ G C R+ M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
+ PD T+T+L+H +A ++ M+ G P + TY N L +R
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ A+ + M + + DVV Y+T+I CK + D A + EM +KGI PD TY
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD--DALNLFTEMDNKGIRPDVFTYS 279
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI LC R S+A L +ML ++PN T+ L++A+ EG+ +A L DEM +
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P+ VTYN++I G C+ R +EA + M PD V+Y T+I GFC
Sbjct: 340 --------SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 385 RIREPGKAYEL 395
+ ++ EL
Sbjct: 392 KAKKVVDGMEL 402
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 143/300 (47%), Gaps = 14/300 (4%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
T N+L+ +C R+ EA+ ++ M E G +P+ ++F +V GL +
Sbjct: 136 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 195
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----R 203
M K PD TY ++I+ C +G P A +L++M V Y+ +I L
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
++DA+ +F M + + PDV TY++LIS C A + ++M+ + I P+ T+
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR--WSDASRLLSDMLERKINPNVVTF 313
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
LI + +L EA LF EM++ + PN TY L+N + + + +A + M
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
K LP VTYN +I G C + + + + R M GL + V+Y T+I GF
Sbjct: 374 KDCLPDV--------VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 129/259 (49%), Gaps = 15/259 (5%)
Query: 76 RIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
++ EAE++ DE TYN+L+ +C +R+DEA I M + P+++++N
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
++ G C ++ M+++ L + TYT+LIH F A+ V +M+
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 187 GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
G P++ TYN L+ L +LE A+ VF + + + PD+ TYN + CK + +E
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK--VE 502
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+++ + KG+ PD Y +I C + EAY LF +M G P++ TY L+
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 303 NAYRIEGQFSKAFHLQDEM 321
A+ +G + + L EM
Sbjct: 563 RAHLRDGDKAASAELIKEM 581
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 14/294 (4%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T+N+L+ A+ + ++ EA + M +R + PN++++N+++ G C R+
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M KD PD TY +LI+ FC ++ +M G + TY LI
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
++A VF+ M + P+++TYNTL+ CK LEKA + + + PD T
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK--NGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y + +C ++ + +DLF + GV P+ Y +++ + +G +A+ L +M
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
G L P TYN +I G + +++ M + DA +Y
Sbjct: 548 EDGPL--------PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 126/280 (45%), Gaps = 45/280 (16%)
Query: 201 RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
L+L++AV +F M + P +V ++ L+S K+K+ DL +F K E++ G+ +
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEIL--GVSHNL 100
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
TY +I LC + +LS A + +M++ G P+ T L+N + + S+A L D+
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 321 MTHKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCLLGR 353
M G+ P VT G P VTY A+I GLC G
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 354 AEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE-----------N 402
+ AL +L M + + D V Y TVI C+ R A L E+D +
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 403 MISWLGIWGLFEDTRKSLMQGLS-----NEDTFSSLMNDY 437
+IS L +G + D + L L N TF+SL++ +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 73/206 (35%), Gaps = 69/206 (33%)
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLR----------------------------------- 288
E L R L +L EA DLF EM++
Sbjct: 34 EKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEI 93
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT---------------- 332
GVS N TY ++N Q S A + +M G+ P VT
Sbjct: 94 LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 333 -----------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
G+ P VT+ +++GL +A EA+ ++ M G PD V+Y VI
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 382 GFCRIREPGKAYEL-------KVEVD 400
G C+ EP A L K+E D
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEAD 239
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 180/366 (49%), Gaps = 18/366 (4%)
Query: 24 CLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQV 83
CL+ R+S V+I G Q + G L + G + ++ R E +
Sbjct: 186 CLKGRVSEALVLIDRMVEYG-FQPDEVTYGPVLNRL---CKSGNSALALDLFRKMEERNI 241
Query: 84 VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX 143
Y+ ++ + C D D+A+ + M +G+K +++++++++ GLC G+
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 144 XXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI---- 199
M +++ PD T+++LI +F +G +A+++ +EMI G +P TYN LI
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 200 RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+ L +A +F M + PD+VTY+ LI+ +CK K D + E+ KG++P+
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD--DGMRLFREISSKGLIPN 419
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
TY L+ C +L+ A +LF+EM+ GV P+ TY L++ G+ +KA + +
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
+M G YN II+G+C + ++A + + + G+ PD V+Y +
Sbjct: 480 KMQKSRMTLGI--------GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 380 ILGFCR 385
I G C+
Sbjct: 532 IGGLCK 537
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 159/314 (50%), Gaps = 14/314 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+T T++ LV +C + RV EA+ ++ M E +P+L++ + ++ GLC KGR+
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M + PDE TY +++ C G+ A + +M + SV Y+ +I L
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+DA+ +F M + + DVVTY++LI C + + +M EM+ + I+PD
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC--NDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
T+ LI + +L EA +L+ EM+ G++P+ TY L++ + E +A + D M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
K G P VTY+ +I C R ++ + + R + GL P+ ++Y T++L
Sbjct: 377 VSK--------GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 382 GFCRIREPGKAYEL 395
GFC+ + A EL
Sbjct: 429 GFCQSGKLNAAKEL 442
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+ +T TYN+L+ +C + + EA + M +G +P++++++ ++ C R+
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
++ K L P+ TY +L+ FC G A+++ EM+ G PSV TY L+ L
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
L A+ +F M + ++ + YN +I C + D A+ + + KG+ P
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD--DAWSLFCSLSDKGVKP 523
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
D TY +I LC + LSEA LFR+M G +P++ TY L+ A+ + L
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELI 583
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAII 345
+EM V GFS T +I
Sbjct: 584 EEMK--------VCGFSADSSTIKMVI 602
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 27/289 (9%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRI----------REAE 81
P+V+ F+A+ ++ + K+ A EL +G+ ++++ + EA
Sbjct: 313 PDVVT--FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 82 QVVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
Q+ D + TY+ L+ +YC +RVD+ M + R ++ +GL PN I++N +V G
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C G++ M + + P TY L+ CD G KA ++ +M S + +
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
YN +I + +++DA +F ++++ + PDVVTYN +I CK + L +A +
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK--KGSLSEADMLF 548
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNET 297
+M G PD TY LIR L + +L EM G S ++ T
Sbjct: 549 RKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 113/258 (43%), Gaps = 24/258 (9%)
Query: 176 ARKVLSEMIDSGFSPSVATYNRL---IRRLRLEDAV-GVFRGMTERDLSPDVVTYNTLIS 231
A + MI S P+ +NRL + R + D V G +GM + D+ T +I+
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
+C+ K+ L AF + G PD T+ L+ CL+ R+SEA L M+
Sbjct: 114 CYCRKKK--LLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
P+ T + L+N ++G+ S+A L D M GF P VTY ++ LC
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVE--------YGFQPDEVTYGPVLNRLCKS 223
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWG 411
G + AL + R M E + V Y VI C+ A L E++ + G
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME--------MKG 275
Query: 412 LFED--TRKSLMQGLSNE 427
+ D T SL+ GL N+
Sbjct: 276 IKADVVTYSSLIGGLCND 293
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 163/328 (49%), Gaps = 14/328 (4%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
EA ++ + +N ++ + C VD+A+ + + M +G++PN++++++++ LC GR
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M +K + P+ T+ +LI F +G +A K+ +MI P + TYN L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I RL+ A +F M +D PD+ TYNTLI FCK K +E E+ EM H+
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR--VEDGTELFREMSHR 354
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G++ D TY LI+ L A +F++M+ GV P+ TY+ L++ G+ KA
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ D M + Y +I G+C G+ ++ + + G+ P+ V
Sbjct: 415 LEVFDYMQK--------SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 375 SYCTVILGFCRIREPGKAYELKVEVDEN 402
+Y T+I G C R +AY L ++ E+
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKED 494
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 165/370 (44%), Gaps = 58/370 (15%)
Query: 74 GRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
G+RI +A +VD+ T T+ L+ + EA+ ++ M +RG +PNL++
Sbjct: 93 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 152
Query: 125 FNAVVQGLCGKG-----------------------------------RMXXXXXXXXXMN 149
+ VV GLC +G + M
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
K + P+ TY+SLI C G A ++LS+MI+ +P++ T+N LI +
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+A + M +R + PD+ TYN+LI+ FC L+KA +M MV K PD DTY
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFC--MHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
LI+ C +R+ + +LFREM G+ + TYT L+ +G A K
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA--------QKV 382
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
F G P +TY+ ++ GLC G+ E+AL V M + + D Y T+I G C+
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 386 IREPGKAYEL 395
+ ++L
Sbjct: 443 AGKVDDGWDL 452
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 149/313 (47%), Gaps = 27/313 (8%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR----------RIREAE 81
PNV+ ++++ + + A +LL EK + N V+ + EAE
Sbjct: 218 PNVVT--YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 82 QVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
++ D+ TYN+L+ +C +R+D+A + M + P+L ++N +++G
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C R+ M+ + L D TYT+LI G A+KV +M+ G P +
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
TY+ L+ L +LE A+ VF M + ++ D+ Y T+I CK + D +++
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD--DGWDLF 453
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
+ KG+ P+ TY +I LC ++ L EAY L ++M G P++ TY L+ A+ +
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 513
Query: 309 GQFSKAFHLQDEM 321
G + + L EM
Sbjct: 514 GDKAASAELIREM 526
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 149/374 (39%), Gaps = 74/374 (19%)
Query: 120 PNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKV 179
P++ FN ++ + + M + ++ + TY LI+ FC + A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 180 LSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLI----- 230
L +M+ G+ PS+ T + L+ R+ DAV + M E PD +T+ TLI
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 231 ---------------SKFCK-------------LKEPDLEKAFEMKAEMVHKGILPDADT 262
+ C+ K D++ AF + +M I D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
+ +I +LC + + +A +LF+EM G+ PN TY+ L++ G++S A L +M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 323 HKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCLLGRAE 355
K P VT P TYN++I G C+ R +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFED 415
+A + M PD +Y T+I GFC+ + EL E+ GL D
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR--------GLVGD 359
Query: 416 --TRKSLMQGLSNE 427
T +L+QGL ++
Sbjct: 360 TVTYTTLIQGLFHD 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 128/282 (45%), Gaps = 30/282 (10%)
Query: 183 MIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE 238
M+ S PS+ +N+L+ + + + + + M +S ++ TYN LI+ FC+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 239 PDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETY 298
L A + +M+ G P T L+ C +R+S+A L +M+ G P+ T+
Sbjct: 61 ISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 118
Query: 299 TGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEAL 358
T L++ + + S+A L D M +G P+ VTY ++ GLC G + A
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGC--------QPNLVTYGVVVNGLCKRGDIDLAF 170
Query: 359 GVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD-----------ENMISWL 407
+L M + D V + T+I C+ R A L E++ ++IS L
Sbjct: 171 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
Query: 408 GIWGLFEDTRKSLMQGLS-----NEDTFSSLMNDYLAQDESV 444
+G + D + L + N TF++L++ ++ + + V
Sbjct: 231 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
Y ++ C +VD+ + ++ +G+KPN++++N ++ GLC K + M
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
+ PD TY +LI G + +++ EM F +T
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 537
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 166/362 (45%), Gaps = 42/362 (11%)
Query: 74 GRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
G+RI +A +VD+ T T+ L+ + EA+ ++ M +RG +PNL++
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+ VV GLC +G + M + + Y+++I C H A + +EM
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 185 DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
+ G P+V TY+ LI L R DA + M ER ++P+VVT+N LI F +KE
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF--VKEGK 345
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
L +A ++ EM+ + I PD TY LI C+ RL EA +F M+ PN TY
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT---------------------------G 333
L+N + + + L EM+ +G + VT G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 334 FSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAY 393
P+ +TYN ++ GLC G+ E+A+ V + + P +Y +I G C+ + +
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 394 EL 395
+L
Sbjct: 526 DL 527
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 162/328 (49%), Gaps = 16/328 (4%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
EA ++ Y+ ++ + C D+A+ + M +G++PN+I++++++ LC R
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M ++ + P+ T+ +LI F +G +A K+ EMI P + TY+ L
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I RL++A +F M +D P+VVTYNTLI+ FCK K D + E+ EM +
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID--EGVELFREMSQR 429
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G++ + TY LI + A +F++M+ GV PN TY L++ G+ KA
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ + + + P+ TYN +I G+C G+ E+ + + G+ PD +
Sbjct: 490 MVVFEYLQR--------SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 375 SYCTVILGFCR--IREPGKAYELKVEVD 400
Y T+I GFCR ++E A K+ D
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 156/317 (49%), Gaps = 14/317 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN L+ +C ++ A+ +L M + G +P++++ ++++ G C R+ M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
+ PD T+T+LIH +A ++ M+ G P++ TY N L +R +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ A + M + +VV Y+T+I CK + D A + EM +KG+ P+ TY
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED--DALNLFTEMENKGVRPNVITYS 299
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI LC +R S+A L +M+ ++PN T+ L++A+ EG+ +A L DEM +
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P TY+++I G C+ R +EA + M P+ V+Y T+I GFC
Sbjct: 360 SI--------DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 385 RIREPGKAYELKVEVDE 401
+ + + EL E+ +
Sbjct: 412 KAKRIDEGVELFREMSQ 428
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 142/302 (47%), Gaps = 27/302 (8%)
Query: 19 LRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR--- 75
L L T + N+ PNVI ++++ + ++ A LL E+ + N V+
Sbjct: 280 LNLFTEMENKGVRPNVIT--YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 76 -------RIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLK 119
++ EAE++ DE TY++L+ +C +R+DEA + M +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 120 PNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKV 179
PN++++N ++ G C R+ M+Q+ L + TYT+LIH F A+ V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 180 LSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK 235
+M+ G P++ TYN L+ L +LE A+ VF + + P + TYN +I CK
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 236 LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
+ +E +++ + KG+ PD Y +I C + EA LFR+M G P++
Sbjct: 518 AGK--VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Query: 296 ET 297
T
Sbjct: 576 GT 577
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 14/213 (6%)
Query: 187 GFSPSVATYNRLIRR----LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
FS Y ++R ++L+DA+G+F GM + P + +N L+S K+K+ DL
Sbjct: 45 AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL- 103
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+ +M GI + TY LI C + ++S A L +M++ G P+ T + L+
Sbjct: 104 -VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
N Y + S A L D+M G+ P +T+ +I+GL L +A EA+ ++
Sbjct: 163 NGYCHGKRISDAVALVDQMVE--------MGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 363 GMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
M + G P+ V+Y V+ G C+ + A+ L
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 170/340 (50%), Gaps = 31/340 (9%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+TTT+N L+ + +V EA+ ++ M E G +P+++++N++V G+C G
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M ++++ D TY+++I C G A + EM G SV TYN L+R L
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+ D + + M R++ P+V+T+N L+ F +KE L++A E+ EM+ +GI P+
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVF--VKEGKLQEANELYKEMITRGISPNII 334
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
TY L+ C+Q RLSEA ++ M+R SP+ T+T L+ Y + + + +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+ +G + + VTY+ ++ G C G+ + A + + M G+ PD ++Y ++
Sbjct: 395 SKRGLV--------ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 382 GFCRIREPGKAYELKVEVDENMISWLGIWGLFEDTRKSLM 421
G C + KA E +FED +KS M
Sbjct: 447 GLCDNGKLEKALE-----------------IFEDLQKSKM 469
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 161/314 (51%), Gaps = 14/314 (4%)
Query: 76 RIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
R E V + TY+ ++ + C D +D A+ + + M +G+K +++++N++V+GLC
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
G+ M +++ P+ T+ L+ +F +G +A ++ EMI G SP++ TY
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 196 NRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM 251
N L+ + RL +A + M SPD+VT+ +LI +C +K D ++ +
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD--DGMKVFRNI 394
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
+G++ +A TY L++ C ++ A +LF+EM+ GV P+ TY L++ G+
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 312 SKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
KA + +++ G V Y II G+C G+ E+A + +P G+ P
Sbjct: 455 EKALEIFEDLQKSKMDLGI--------VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 372 DAVSYCTVILGFCR 385
+ ++Y +I G C+
Sbjct: 507 NVMTYTVMISGLCK 520
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 169/331 (51%), Gaps = 18/331 (5%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E + T N ++ +C + A +L + + G +P+ +FN +++GL +G++
Sbjct: 115 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKV 174
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M + PD TY S+++ C G A +L +M + V TY+ +
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 234
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I L ++ A+ +F+ M + + VVTYN+L+ CK + + + A +K +MV +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN-DGALLLK-DMVSR 292
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
I+P+ T+ L+ + +L EA +L++EM+ G+SPN TY LM+ Y ++ + S+A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
++ D M SP VT+ ++I G C++ R ++ + V R + + GL +AV
Sbjct: 353 NNMLDLMVR--------NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 375 SYCTVILGFCRIREPGKAYELKVEVDENMIS 405
+Y ++ GFC + GK +L E+ + M+S
Sbjct: 405 TYSILVQGFC---QSGK-IKLAEELFQEMVS 431
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 141/299 (47%), Gaps = 24/299 (8%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
PNVI F + ++ + K+ A EL K +G+ N + TYN
Sbjct: 296 PNVIT--FNVLLDVFVKEGKLQEANELYKEMITRGISPNII----------------TYN 337
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
L+ YC R+ EA +L M P++++F ++++G C R+ ++++
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDA 207
L + TY+ L+ FC G A ++ EM+ G P V TY L+ L +LE A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ +F + + + +V Y T+I CK +E A+ + + KG+ P+ TY +I
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCK--GGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
LC + LSEA L R+M G +PN+ TY L+ A+ +G + + L +EM GF
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 25 LRNRLSPPNV----IIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS------- 73
+RN+ SP V +I+G+ V K+V ++ + +++G+ +N+V+
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMV-------KRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 74 ---GRRIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPN 121
+I+ AE++ E TY L+ C + ++++A+ I + + +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 122 LISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLS 181
++ + +++G+C G++ + K + P+ TYT +I C KG +A +L
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 182 EMIDSGFSPSVATYNRLIR 200
+M + G +P+ TYN LIR
Sbjct: 533 KMEEDGNAPNDCTYNTLIR 551
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
Y ++ C +V++A + + +G+KPN++++ ++ GLC KG + M
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
+ AP++ TY +LI G + K++ EM GFS ++ +I L
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 207 AVGVFRGMTERDLSP----DVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
+ F ERD S +V L S +K+ D F+ EM+ LP
Sbjct: 34 TISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQ---EMIRSRPLPSLVD 90
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
+ + ++ + D +++ G++ N T ++N + + A+ + ++
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
G+ P T+N +I GL L G+ EA+ ++ M E G PD V+Y +++ G
Sbjct: 151 K--------LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Query: 383 FCRIREPGKAYELKVEVDE 401
CR + A +L +++E
Sbjct: 203 ICRSGDTSLALDLLRKMEE 221
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 165/339 (48%), Gaps = 30/339 (8%)
Query: 51 KVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGIL 110
++G AF L+ + G E N V YN L+ C + ++ A+ +L
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVV----------------VYNTLIDGLCKNGELNIALELL 199
Query: 111 RCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDK 170
M ++GL +++++N ++ GLC GR M ++ + PD T+T+LI +F +
Sbjct: 200 NEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
Query: 171 GHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTY 226
G+ +A+++ EMI S P+ TYN +I L RL DA F M + P+VVTY
Sbjct: 260 GNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY 319
Query: 227 NTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM 286
NTLIS FCK + D + ++ M +G D TY LI C +L A D+F M
Sbjct: 320 NTLISGFCKFRMVD--EGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377
Query: 287 LRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIY 346
+ V+P+ T+ L++ + G+ A D+M G V YN +I+
Sbjct: 378 VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGI--------VAYNIMIH 429
Query: 347 GLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
GLC + E+A + +P G+ PDA +Y +ILG C+
Sbjct: 430 GLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 14/300 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
++ L+ +C R+ A+ +L M + G +P++++F +++ G C R+ M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
+ P+ Y +LI C G A ++L+EM G V TYN L+ L R
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
DA + R M +R ++PDVVT+ LI F +K+ +L++A E+ EM+ + P+ TY
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVF--VKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
+I LC+ RL +A F M G PN TY L++ + F + DE K
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF-------CKFRMVDE-GMK 337
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
F GF+ TYN +I+G C +G+ AL + M ++PD +++C ++ G C
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 138/290 (47%), Gaps = 14/290 (4%)
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYT 161
R ++A + M P+++ F ++ R M ++ D ++T
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 162 SLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTER 217
LIH FC A VL +M+ G+ PS+ T+ L+ R+ DA + M +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
P+VV YNTLI C K +L A E+ EM KG+ D TY L+ LC R S
Sbjct: 171 GYEPNVVVYNTLIDGLC--KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
+A + R+M++ ++P+ T+T L++ + +G +A L EM + P+
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ--------SSVDPN 280
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIR 387
+VTYN+II GLC+ GR +A M G P+ V+Y T+I GFC+ R
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 134/318 (42%), Gaps = 62/318 (19%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSV-----------SGRRIREA 80
PNV++ T + L ++ ++ A ELL +KG+ ++ V SGR A
Sbjct: 174 PNVVVYN-TLIDGL-CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 81 EQVVD--------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+ D + T+ AL+ + +DEA + + M + + PN +++N+++ GL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C GR+ M K P+ TY +LI FC + K+ M GF+ +
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVT----------------------- 225
TYN LI +L A+ +F M R ++PD++T
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 226 ------------YNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQ 273
YN +I CK + +EKA+E+ + +G+ PDA TY +I LC
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADK--VEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 274 QRLSEAYDLFREMLRWGV 291
EA +L R M G+
Sbjct: 470 GPRREADELIRRMKEEGI 487
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 116/260 (44%), Gaps = 25/260 (9%)
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A + EM+ S PS+ + RL+ R E + + M +S D+ ++ LI
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
FC+ L A + +M+ G P T+ L+ CL R+ +A+ L M++ G
Sbjct: 115 CFCRCSR--LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
PN Y L++ G+ + A L +EM K G VTYN ++ GLC
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKK--------GLGADVVTYNTLLTGLCYS 224
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVE-----VDENMISW 406
GR +A +LR M + ++PD V++ +I F + +A EL E VD N +++
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 407 ------LGIWGLFEDTRKSL 420
L + G D +K+
Sbjct: 285 NSIINGLCMHGRLYDAKKTF 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 236 LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
L E AF + EMVH LP + L+ +R ++M +G+S +
Sbjct: 47 LHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDL 106
Query: 296 ETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAE 355
++T L++ + + S A + +M G+ PS VT+ ++++G CL+ R
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMK--------LGYEPSIVTFGSLLHGFCLVNRIG 158
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMIS---------- 405
+A ++ M + G P+ V Y T+I G C+ E A EL E+++ +
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 406 ----WLGIWGLFEDTRKSLMQGLSNED--TFSSLMNDYLAQ 440
+ G W + +M+ N D TF++L++ ++ Q
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 155/311 (49%), Gaps = 18/311 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T+N L+ C + RV EA ++ M +GL +++++ +V G+C G M
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
+ + PD Y+++I C GH A+ + SEM++ G +P+V TYN +I R
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
DA + R M ER+++PDV+T+N LIS +KE L +A ++ EM+H+ I PD TY
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISA--SVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
+I C R +A +F M SP+ T+ +++ Y + + L E++ +
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G + + TYN +I+G C + A + + M G+ PD ++ ++ GFC
Sbjct: 462 GLV--------ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 385 RIREPGKAYEL 395
+ +A EL
Sbjct: 514 ENEKLEEALEL 524
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 149/310 (48%), Gaps = 18/310 (5%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E + + Y+A++ C D +A + M E+G+ PN+ ++N ++ G C GR
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M ++++ PD T+ +LI +G +A K+ EM+ P TYN +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I + R +DA +F M SPDVVT+NT+I +C+ K D + ++ E+ +
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVD--EGMQLLREISRR 461
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G++ + TY LI C L+ A DLF+EM+ GV P+ T L+ + + +A
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
L + + ++ V YN II+G+C + +EA + +P G+ PD
Sbjct: 522 LELFEVIQ--------MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 375 SYCTVILGFC 384
+Y +I GFC
Sbjct: 574 TYNVMISGFC 583
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 152/333 (45%), Gaps = 33/333 (9%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERG---------------LKPNLISFNAVVQ 130
+ T+N L+ C ++R+ EA+ + M E G L P +I+FN ++
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLIN 234
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
GLC +GR+ M K L D TY ++++ C G A +LS+M ++ P
Sbjct: 235 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 294
Query: 191 SVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFE 246
V Y+ +I RL DA +F M E+ ++P+V TYN +I FC A
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR--WSDAQR 352
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
+ +M+ + I PD T+ LI + +L EA L EML + P+ TY ++ +
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 307 IEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPE 366
+F A H+ D M SP VT+N II C R +E + +LR +
Sbjct: 413 KHNRFDDAKHMFDLMA------------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 367 IGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
GL + +Y T+I GFC + A +L E+
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 168/348 (48%), Gaps = 33/348 (9%)
Query: 71 SVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
++S R E ++ ++N L+ +C ++ ++ +T+ G +P++++FN ++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 131 GLCGKGRMXXXXXXXXXMNQK---------------DLAPDERTYTSLIHLFCDKGHPGK 175
GLC + R+ M + L P T+ +LI+ C +G +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A ++++M+ G V TY ++ + + A+ + M E + PDVV Y+ +I
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
+ C K+ A + +EM+ KGI P+ TY +I C R S+A L R+M+ +
Sbjct: 305 RLC--KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
+P+ T+ L++A EG+ +A L DEM H+ P VTYN++IYG C
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF--------PDTVTYNSMIYGFCKH 414
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
R ++A + M ++ SPD V++ T+I +CR + + +L E+
Sbjct: 415 NRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 140/310 (45%), Gaps = 22/310 (7%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELL---KAGTEKGVESNSVSGRRIREAEQVVDE--- 86
N +I GF + G + + E T + S SV ++ EAE++ DE
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 87 ------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
T TYN+++ +C R D+A + M P++++FN ++ C R+
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDE 450
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
++++ L + TY +LIH FC+ + A+ + EMI G P T N L+
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 201 RL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
+LE+A+ +F + + D V YN +I CK + D +A+++ + G+
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD--EAWDLFCSLPIHGV 568
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
PD TY +I C + +S+A LF +M G P+N TY L+ G+ K+
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 317 LQDEMTHKGF 326
L EM GF
Sbjct: 629 LISEMRSNGF 638
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 145/326 (44%), Gaps = 53/326 (16%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN ++ +C R +A +LR M ER + P++++FNA++ +G++ M
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
+ + PD TY S+I+ FC A+ M D SP V T+N +I R R+
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT-- 262
++ + + R ++ R L + TYNTLI FC++ +L A ++ EM+ G+ PD T
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVD--NLNAAQDLFQEMISHGVCPDTITCN 506
Query: 263 ---------------------------------YEPLIRTLCLQQRLSEAYDLFREMLRW 289
Y +I +C ++ EA+DLF +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 290 GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLC 349
GV P+ +TY +++ + + S A L +M G P + TYN +I G
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD--------NGHEPDNSTYNTLIRGCL 618
Query: 350 LLGRAEEALGVLRGMPEIGLSPDAVS 375
G ++++ ++ M G S DA +
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 198 LIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
+R R + A+ ++R M R + ++ ++N LI FC + L + ++ G
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK--LSFSLSTFGKLTKLGFQ 173
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
PD T+ L+ LCL+ R+SEA LF Y +E F +A L
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALF--------------------GYMVETGFLEAVAL 213
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
D+M G +P +T+N +I GLCL GR EA ++ M GL D V+Y
Sbjct: 214 FDQMVE--------IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 378 TVILGFCRIREPGKAYELKVEVDENMI 404
T++ G C++ + A L +++E I
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHI 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 87/191 (45%), Gaps = 21/191 (10%)
Query: 29 LSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVD--- 85
++ P+V+ F + ++ +K+V +LL+ + +G+ +N+ + + VD
Sbjct: 427 MASPDVVT--FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 86 ----------------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVV 129
+T T N L+ +C +E+++EA+ + + + + +++N ++
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 130 QGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFS 189
G+C ++ + + PD +TY +I FC K A + +M D+G
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 190 PSVATYNRLIR 200
P +TYN LIR
Sbjct: 605 PDNSTYNTLIR 615
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAEQ 82
N +I GF V NL + A +L + GV ++++ ++ EA +
Sbjct: 471 NTLIHGFCEVDNLNA-------AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 83 VVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC 133
+ + +T YN ++ C +VDEA + + G++P++ ++N ++ G C
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 134 GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVA 193
GK + M PD TY +LI G K+ +++SEM +GFS
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 194 T 194
T
Sbjct: 644 T 644
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 155/311 (49%), Gaps = 18/311 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T+N L+ C + RV EA ++ M +GL +++++ +V G+C G M
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
+ + PD Y+++I C GH A+ + SEM++ G +P+V TYN +I R
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
DA + R M ER+++PDV+T+N LIS +KE L +A ++ EM+H+ I PD TY
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISA--SVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
+I C R +A +F M SP+ T+ +++ Y + + L E++ +
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G + + TYN +I+G C + A + + M G+ PD ++ ++ GFC
Sbjct: 462 GLV--------ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 385 RIREPGKAYEL 395
+ +A EL
Sbjct: 514 ENEKLEEALEL 524
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 149/310 (48%), Gaps = 18/310 (5%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E + + Y+A++ C D +A + M E+G+ PN+ ++N ++ G C GR
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M ++++ PD T+ +LI +G +A K+ EM+ P TYN +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I + R +DA +F M SPDVVT+NT+I +C+ K D + ++ E+ +
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVD--EGMQLLREISRR 461
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G++ + TY LI C L+ A DLF+EM+ GV P+ T L+ + + +A
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
L + + ++ V YN II+G+C + +EA + +P G+ PD
Sbjct: 522 LELFEVIQ--------MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 375 SYCTVILGFC 384
+Y +I GFC
Sbjct: 574 TYNVMISGFC 583
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 186/390 (47%), Gaps = 52/390 (13%)
Query: 71 SVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
++S R E ++ ++N L+ +C ++ ++ +T+ G +P++++FN ++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 131 GLCGKGRMXXXXXXXXXMNQK---------------DLAPDERTYTSLIHLFCDKGHPGK 175
GLC + R+ M + L P T+ +LI+ C +G +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A ++++M+ G V TY ++ + + A+ + M E + PDVV Y+ +I
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
+ C K+ A + +EM+ KGI P+ TY +I C R S+A L R+M+ +
Sbjct: 305 RLC--KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
+P+ T+ L++A EG+ +A L DEM H+ P VTYN++IYG C
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF--------PDTVTYNSMIYGFCKH 414
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWG 411
R ++A + M ++ SPD V++ T+I +CR + VDE G+
Sbjct: 415 NRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAK----------RVDE------GMQL 454
Query: 412 LFEDTRKSLMQGLSNEDTFSSLMNDYLAQD 441
L E +R+ L ++N T+++L++ + D
Sbjct: 455 LREISRRGL---VANTTTYNTLIHGFCEVD 481
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 140/310 (45%), Gaps = 22/310 (7%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELL---KAGTEKGVESNSVSGRRIREAEQVVDE--- 86
N +I GF + G + + E T + S SV ++ EAE++ DE
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 87 ------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
T TYN+++ +C R D+A + M P++++FN ++ C R+
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDE 450
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
++++ L + TY +LIH FC+ + A+ + EMI G P T N L+
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 201 RL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
+LE+A+ +F + + D V YN +I CK + D +A+++ + G+
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD--EAWDLFCSLPIHGV 568
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
PD TY +I C + +S+A LF +M G P+N TY L+ G+ K+
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 317 LQDEMTHKGF 326
L EM GF
Sbjct: 629 LISEMRSNGF 638
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 149/339 (43%), Gaps = 53/339 (15%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN ++ +C R +A +LR M ER + P++++FNA++ +G++ M
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
+ + PD TY S+I+ FC A+ M D SP V T+N +I R R+
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT-- 262
++ + + R ++ R L + TYNTLI FC++ +L A ++ EM+ G+ PD T
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVD--NLNAAQDLFQEMISHGVCPDTITCN 506
Query: 263 ---------------------------------YEPLIRTLCLQQRLSEAYDLFREMLRW 289
Y +I +C ++ EA+DLF +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 290 GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLC 349
GV P+ +TY +++ + + S A L +M G P + TYN +I G
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD--------NGHEPDNSTYNTLIRGCL 618
Query: 350 LLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIRE 388
G ++++ ++ M G S DA + CR+ +
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD 657
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 198 LIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
+R R + A+ ++R M R + ++ ++N LI FC + L + ++ G
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK--LSFSLSTFGKLTKLGFQ 173
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
PD T+ L+ LCL+ R+SEA LF Y +E F +A L
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALF--------------------GYMVETGFLEAVAL 213
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
D+M G +P +T+N +I GLCL GR EA ++ M GL D V+Y
Sbjct: 214 FDQMVE--------IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 378 TVILGFCRIREPGKAYELKVEVDENMI 404
T++ G C++ + A L +++E I
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHI 292
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 102/236 (43%), Gaps = 25/236 (10%)
Query: 29 LSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVD--- 85
++ P+V+ F + ++ +K+V +LL+ + +G+ +N+ + + VD
Sbjct: 427 MASPDVVT--FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 86 ----------------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVV 129
+T T N L+ +C +E+++EA+ + + + + +++N ++
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 130 QGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFS 189
G+C ++ + + PD +TY +I FC K A + +M D+G
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 190 PSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
P +TYN LIR ++ ++ + M S D T C++ + ++
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEI 660
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 160/335 (47%), Gaps = 33/335 (9%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY+ L+ +C ++ A+ +L M + G +P++++ N+++ G C R+ M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
+ PD T+ +LIH +A ++ M+ G P + TY N L +R +
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ A+ + + M + + P VV YNT+I C K ++ A + EM +KGI P+ TY
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK--NVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LIR LC R S+A L +M+ ++PN T++ L++A+ EG+ +A L DEM +
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 325 GFLP------GFVTGFS---------------------PSHVTYNAIIYGLCLLGRAEEA 357
P + GF P+ VTYN +I G C R +E
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 358 LGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKA 392
+ + R M + GL + V+Y T+I GF + RE A
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 155/303 (51%), Gaps = 14/303 (4%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
YN ++ A C + V++A+ + M +G++PN++++N++++ LC GR
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M ++ + P+ T+++LI F +G +A K+ EMI P + TY+ LI
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
RL++A +F M +D P+VVTYNTLI FCK K D + E+ EM +G++ + T
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD--EGMELFREMSQRGLVGNTVT 433
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y LI + A +F++M+ GV P+ TY+ L++ G+ A + + +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
+ P TYN +I G+C G+ E+ + + G+ P+ V+Y T++ G
Sbjct: 494 R--------SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 383 FCR 385
FCR
Sbjct: 546 FCR 548
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 164/362 (45%), Gaps = 42/362 (11%)
Query: 74 GRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
G RI +A +V + + T+N L+ R EA+ ++ M +G +P+L++
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT 223
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+ VV GLC +G + M Q + P Y ++I C+ + A + +EM
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 185 DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
+ G P+V TYN LIR L R DA + M ER ++P+VVT++ LI F +KE
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF--VKEGK 341
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
L +A ++ EM+ + I PD TY LI C+ RL EA +F M+ PN TY
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT---------------------------G 333
L+ + + + L EM+ +G + VT G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 334 FSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAY 393
P +TY+ ++ GLC G+ E AL V + + PD +Y +I G C+ + +
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 394 EL 395
+L
Sbjct: 522 DL 523
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 172/372 (46%), Gaps = 32/372 (8%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
P V+I + + + K V A L KG+ N V TYN
Sbjct: 254 PGVVI--YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV----------------TYN 295
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
+L+ C R +A +L M ER + PN+++F+A++ +G++ M ++
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDA 207
+ PD TY+SLI+ FC +A+ + MI P+V TYN LI+ R+++
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ +FR M++R L + VTY TLI F + +E D A + +MV G+LPD TY L+
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECD--NAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
LC ++ A +F + R + P+ TY ++ G+ + L ++ K
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK--- 530
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIR 387
G P+ VTY ++ G C G EEA + R M E G PD+ +Y T+I R
Sbjct: 531 -----GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Query: 388 EPGKAYELKVEV 399
+ + EL E+
Sbjct: 586 DKAASAELIREM 597
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 161/349 (46%), Gaps = 24/349 (6%)
Query: 100 DERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERT 159
D ++D+A+ + M + P+++ F+ ++ + + M ++ + T
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 160 YTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMT 215
Y+ LI+ FC + A VL++M+ G+ P + T N L+ R+ DAV + M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 216 ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQR 275
E PD T+NTLI + +A + MV KG PD TY ++ LC +
Sbjct: 179 EMGYQPDSFTFNTLIHGL--FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 276 LSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFS 335
+ A L ++M + + P Y +++A + A +L EM +K G
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK--------GIR 288
Query: 336 PSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC---RIREPGKA 392
P+ VTYN++I LC GR +A +L M E ++P+ V++ +I F ++ E K
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 393 YE--LKVEVDENMISWLGIWGLF-----EDTRKSLMQGLSNEDTFSSLM 434
Y+ +K +D ++ ++ + F D K + + + ++D F +++
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 30/289 (10%)
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A + +M+ S PS+ +++L+ + + + + + M +S ++ TY+ LI+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
FC+ + L A + A+M+ G PD T L+ C R+S+A L +M+ G
Sbjct: 125 CFCRRSQ--LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
P++ T+ L++ + S+A L D M V G P VTY ++ GLC
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMV--------VKGCQPDLVTYGIVVNGLCKR 234
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD----------- 400
G + AL +L+ M + + P V Y T+I C + A L E+D
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 401 ENMISWLGIWGLFEDTRKSLMQGLS-----NEDTFSSLMNDYLAQDESV 444
++I L +G + D + L + N TFS+L++ ++ + + V
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 27/178 (15%)
Query: 235 KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
+L + L+ A + +MV P + L+ + + L +M G+S N
Sbjct: 56 RLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 115
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT---------------------- 332
TY+ L+N + Q S A + +M G+ P VT
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 333 -----GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
G+ P T+N +I+GL RA EA+ ++ M G PD V+Y V+ G C+
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 50/109 (45%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TYN ++ C +V++ + ++ +G+KPN++++ ++ G C KG
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
M ++ PD TY +LI G + +++ EM F +T
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 164/325 (50%), Gaps = 17/325 (5%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+V + TYN+L+ Y + V A+ +L M +G KPN+ S+ +V G C G++
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M+ L P+ + LI FC + +A ++ EM G P V T+N LI L
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
++ A+ + R M + + VTYNTLI+ F L+ ++++A ++ EMV +G
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF--LRRGEIKEARKLVNEMVFQGSPL 562
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
D TY LI+ LC + +A LF +MLR G +P+N + L+N G +A Q
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
EM + G +P VT+N++I GLC GR E+ L + R + G+ PD V++ T
Sbjct: 623 KEMVLR--------GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 379 VILGFCRIREPGKAYELKVEVDENM 403
++ C+ G Y+ + +DE +
Sbjct: 675 LMSWLCK---GGFVYDACLLLDEGI 696
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 203/532 (38%), Gaps = 140/532 (26%)
Query: 27 NRLSPPN-----VIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAE 81
+R PP V+++ F AV + S A LL+ T+ G NSV
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDS-------ALSLLRDMTKHGCVPNSV--------- 253
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
Y L+ + RV+EA+ +L M G P+ +FN V+ GLC R+
Sbjct: 254 -------IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 306
Query: 142 XXXXXXMNQKDLAPDERTY-------------------------------TSLIHLFCDK 170
M + APD+ TY +LIH F
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTH 366
Query: 171 GHPGKARKVLSEMIDS-GFSPSVATYNRLIRRLRLEDAVG----VFRGMTERDLSPDVVT 225
G A+ VLS+M+ S G P V TYN LI E VG V M + P+V +
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 226 YNTLISKFCKL---------------------------------KEPDLEKAFEMKAEMV 252
Y L+ FCKL KE + +A E+ EM
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 253 HKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFS 312
KG PD T+ LI LC + A L R+M+ GV N TY L+NA+ G+
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 313 KAFHLQDEMTHKG---------------------------FLPGFVTGFSPSHVTYNAII 345
+A L +EM +G F G +PS+++ N +I
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 346 YGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIR--EPGKAYELKVEVD--- 400
GLC G EEA+ + M G +PD V++ ++I G CR E G K++ +
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 401 ------ENMISWLGIWGLFEDTRKSLMQGLS-----NEDTFSSLMNDYLAQD 441
++SWL G D L +G+ N T+S L+ + Q+
Sbjct: 667 PDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQE 718
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 42/330 (12%)
Query: 25 LRNRLSPPNV-----IIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIRE 79
+RN+ PNV ++ GF +G K+ A+ +L + G++ N+V
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLG-------KIDEAYNVLNEMSADGLKPNTVG------ 461
Query: 80 AEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
+N L+ A+C + R+ EA+ I R M +G KP++ +FN+++ GLC +
Sbjct: 462 ----------FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI 199
M + + + TY +LI+ F +G +ARK+++EM+ G TYN LI
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 200 RRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
+ L ++ A +F M +P ++ N LI+ C + +E+A E + EMV +G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC--RSGMVEEAVEFQKEMVLRG 629
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
PD T+ LI LC R+ + +FR++ G+ P+ T+ LM+ G A
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAII 345
L DE G GF P+H T++ ++
Sbjct: 690 LLLDE--------GIEDGFVPNHRTWSILL 711
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 162/356 (45%), Gaps = 32/356 (8%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T+ ++ A+C +D A+ +LR MT+ G PN + + ++ L R+ M
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAV 208
PD T+ +I C +A K+++ M+ GF+P TY L+ L V
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK-GILPDADTYEPLI 267
+ + R P++V +NTLI F D KA + ++MV GI+PD TY LI
Sbjct: 339 DAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA--VLSDMVTSYGIVPDVCTYNSLI 396
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
+ + A ++ +M G PN +YT L++ + G+ +A+++ +EM+
Sbjct: 397 YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS----- 451
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIR 387
G P+ V +N +I C R EA+ + R MP G PD ++ ++I G C +
Sbjct: 452 ---ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 388 EPGKAYELKVEVDENMISWLGIWGLFEDTRKSLMQG-LSNEDTFSSLMNDYLAQDE 442
E A +W L R + +G ++N T+++L+N +L + E
Sbjct: 509 EIKHA----------------LWLL----RDMISEGVVANTVTYNTLINAFLRRGE 544
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 112/283 (39%), Gaps = 42/283 (14%)
Query: 114 TERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHP 173
++ G + + + ++ L G M + + E + S++ + G P
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFP 162
Query: 174 GKARKVLSEMIDS-GFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISK 232
G+ +++ EM + P+ +YN V L+S
Sbjct: 163 GQTTRLMLEMRNVYSCEPTFKSYN---------------------------VVLEILVSG 195
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
C + A + +M+ + I P T+ +++ C + A L R+M + G
Sbjct: 196 NCH------KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCV 249
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
PN+ Y L+++ + ++A L +EM F+ G P T+N +I GLC
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEM--------FLMGCVPDAETFNDVILGLCKFD 301
Query: 353 RAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
R EA ++ M G +PD ++Y ++ G C+I A +L
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 186/404 (46%), Gaps = 54/404 (13%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAE 81
P+++ +++ N SK++ A L+ E G + ++ + + EA
Sbjct: 151 PDIVT--LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 82 QVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+VD+ TY +V C +D A+ +L+ M + ++ +++ +N ++ GL
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C M M+ K + PD TY+SLI C+ G A ++LS+MI+ +P+V
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 193 ATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
T++ LI + +L +A ++ M +R + PD+ TY++LI+ FC L++A M
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC--MHDRLDEAKHMF 386
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
M+ K P+ TY LI+ C +R+ E +LFREM + G+ N TYT L++ +
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 309 GQFSKAFHLQDEMTHKGFLPGFVT---------------------------GFSPSHVTY 341
A + +M G P +T P TY
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 342 NAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
N +I G+C G+ E+ + + G+SP+ ++Y T+I GFCR
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 158/317 (49%), Gaps = 14/317 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY+ + +C ++ A+ +L M + G +P++++ ++++ G C R+ M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
+ PD T+T+LIH +A ++ +M+ G P + TY N L +R +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ A+ + + M + + DVV YNT+I CK K D A + EM +KGI PD TY
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD--DALNLFTEMDNKGIRPDVFTYS 297
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI LC R S+A L +M+ ++PN T++ L++A+ EG+ +A L DEM +
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P TY+++I G C+ R +EA + M P+ V+Y T+I GFC
Sbjct: 358 --------SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 385 RIREPGKAYELKVEVDE 401
+ + + EL E+ +
Sbjct: 410 KAKRVEEGMELFREMSQ 426
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 151/311 (48%), Gaps = 14/311 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ T ++L+ YC +R+ +A+ ++ M E G KP+ +F ++ GL +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M Q+ PD TY ++++ C +G A +L +M V YN +I L
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
++DA+ +F M + + PDV TY++LIS C A + ++M+ + I P+
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR--WSDASRLLSDMIERKINPNVV 329
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
T+ LI + +L EA L+ EM++ + P+ TY+ L+N + + + +A H+ + M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
K P VTY+ +I G C R EE + + R M + GL + V+Y T+I
Sbjct: 390 ISKDCFPNV--------VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 382 GFCRIREPGKA 392
GF + R+ A
Sbjct: 442 GFFQARDCDNA 452
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 15/264 (5%)
Query: 76 RIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
++ EAE++ DE TY++L+ +C +R+DEA + M + PN+++++
Sbjct: 343 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYS 402
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
+++G C R+ M+Q+ L + TYT+LIH F A+ V +M+
Sbjct: 403 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462
Query: 187 GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
G P++ TYN L+ L +L A+ VF + + PD+ TYN +I CK + +E
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK--VE 520
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+E+ + KG+ P+ Y +I C + EA L ++M G PN+ TY L+
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGF 326
A +G + L EM GF
Sbjct: 581 RARLRDGDREASAELIKEMRSCGF 604
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 147/325 (45%), Gaps = 45/325 (13%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TY++L+ C R +A +L M ER + PN+++F+A++ +G++
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M ++ + PD TY+SLI+ FC +A+ + MI P+V TY+ LI+
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF--EMKAEMVHKGIL-- 257
R+E+ + +FR M++R L + VTY TLI F + ++ D + +M + VH IL
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 258 -----------------------------PDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
PD TY +I +C ++ + ++LF +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGL 348
GVSPN Y +++ + +G +A L +M G L P+ TYN +I
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL--------PNSGTYNTLIRAR 583
Query: 349 CLLGRAEEALGVLRGMPEIGLSPDA 373
G E + +++ M G + DA
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGDA 608
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 136/289 (47%), Gaps = 30/289 (10%)
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A + +M+ S PS+ +N+L+ + + E + + M +S D+ TY+ I+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
FC+ + L A + A+M+ G PD T L+ C +R+S+A L +M+ G
Sbjct: 127 CFCRRSQ--LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
P+ T+T L++ + + S+A L D+M +G P VTY ++ GLC
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC--------QPDLVTYGTVVNGLCKR 236
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE---------- 401
G + AL +L+ M + + D V Y T+I G C+ + A L E+D
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 402 -NMISWLGIWGLFEDTRKSLMQGLS-----NEDTFSSLMNDYLAQDESV 444
++IS L +G + D + L + N TFS+L++ ++ + + V
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN ++ C +V++ + ++ +G+ PN+I++N ++ G C KG M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
+ P+ TY +LI G + +++ EM GF+ +T
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 158/350 (45%), Gaps = 49/350 (14%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+N L+ +C + + +A + +T+R L+P ++SFN ++ G C G + M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSE-------------------------- 182
+ PD TY++LI+ C + A + E
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 183 ---------MIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTL 229
M+ G P + YN L+ + L A + GM R L PD +TY TL
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 230 ISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW 289
I FC + D+E A E++ EM GI D + L+ +C + R+ +A REMLR
Sbjct: 422 IDGFC--RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 290 GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLC 349
G+ P++ TYT +M+A+ +G F L EM G + PS VTYN ++ GLC
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV--------PSVVTYNVLLNGLC 531
Query: 350 LLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
LG+ + A +L M IG+ PD ++Y T++ G R K Y K E+
Sbjct: 532 KLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI 581
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 182 EMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLK 237
E++D+GF +V +N L+ + + DA VF +T+R L P VV++NTLI+ +CK+
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 238 EPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNET 297
+L++ F +K +M PD TY LI LC + ++ A+ LF EM + G+ PN+
Sbjct: 290 --NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 298 YTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEA 357
+T L++ + G+ ++ + + G P V YN ++ G C G A
Sbjct: 348 FTTLIHGHSRNGEI--------DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 358 LGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
++ GM GL PD ++Y T+I GFCR + A E++ E+D+N I
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 137/292 (46%), Gaps = 14/292 (4%)
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
+ G N+ FN ++ C +G + + ++ L P ++ +LI+ +C G+
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 175 KARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLI 230
+ ++ +M S P V TY+ LI L +++ A G+F M +R L P+ V + TLI
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
+ E DL K E +M+ KG+ PD Y L+ C L A ++ M+R G
Sbjct: 353 HGHSRNGEIDLMK--ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCL 350
+ P+ TYT L++ + G A ++ EM G V ++A++ G+C
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ--------NGIELDRVGFSALVCGMCK 462
Query: 351 LGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
GR +A LR M G+ PD V+Y ++ FC+ + ++L E+ +
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD 514
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 9/189 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TY L+ +C V+ A+ I + M + G++ + + F+A+V G+C +GR+
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M + + PD+ TYT ++ FC KG K+L EM G PSV TYN L+ L
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
++++A + M + PD +TYNTL+ + + K + K E+ GI+ D
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQKPEI---GIVADLA 588
Query: 262 TYEPLIRTL 270
+Y+ ++ L
Sbjct: 589 SYKSIVNEL 597
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 149/308 (48%), Gaps = 13/308 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY+ + +C ++ A+ IL M + G P++++ N+++ G C R+ M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
+ PD T+T+L+H +A ++ M+ G P + TY N L +R
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ A+ + M + + DVV YNT+I CK K D AF++ +M KGI PD TY
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD--DAFDLFNKMETKGIKPDVFTYN 289
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
PLI LC R S+A L +ML ++P+ + L++A+ EG+ +A L DEM
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P V YN +I G C R EE + V R M + GL + V+Y T+I GF
Sbjct: 350 KHC-------FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 385 RIREPGKA 392
+ R+ A
Sbjct: 403 QARDCDNA 410
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 159/337 (47%), Gaps = 26/337 (7%)
Query: 74 GRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
G RI EA +VD+ T T+ LV + EA+ ++ M +G +P+L++
Sbjct: 158 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+ AV+ GLC +G M + + D Y ++I C H A + ++M
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 185 DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
G P V TYN LI L R DA + M E++++PD+V +N LI F +KE
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF--VKEGK 335
Query: 241 LEKAFEMKAEMVH-KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT 299
L +A ++ EMV K PD Y LI+ C +R+ E ++FREM + G+ N TYT
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 300 GLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT-GFSPSHVTYNAIIYGLCLLGRAEEAL 358
L++ + F +D + V+ G P +TYN ++ GLC G E AL
Sbjct: 396 TLIHGF---------FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 359 GVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
V M + + D V+Y T+I C+ + ++L
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL 483
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 178/387 (45%), Gaps = 25/387 (6%)
Query: 24 CLRNRLSPPNVIIRGFTAVG---NLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREA 80
C NR+S ++ +G + + + V G F+ KA E+ ++ R + +
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS-----EAVALVERMVVKG 210
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
Q + TY A++ C D A+ +L M + ++ +++ +N ++ GLC M
Sbjct: 211 CQ--PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI- 199
M K + PD TY LI C+ G A ++LS+M++ +P + +N LI
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 200 ---RRLRLEDAVGVFRGMTE-RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
+ +L +A ++ M + + PDVV YNTLI FCK K +E+ E+ EM +G
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR--VEEGMEVFREMSQRG 386
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
++ + TY LI + A +F++M+ GV P+ TY L++ G A
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVS 375
+ + M + VTY +I LC G+ E+ + + G+ P+ V+
Sbjct: 447 VVFEYMQKR--------DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 376 YCTVILGFCRIREPGKAYELKVEVDEN 402
Y T++ GFCR +A L VE+ E+
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKED 525
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 153/326 (46%), Gaps = 15/326 (4%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E ++ + YN ++ C + +D+A + M +G+KP++ ++N ++ LC GR
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFS-PSVATYNR 197
M +K++ PD + +LI F +G +A K+ EM+ S P V YN
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 198 LIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH 253
LI+ R+E+ + VFR M++R L + VTY TLI F + D + A + +MV
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF--FQARDCDNAQMVFKQMVS 419
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK 313
G+ PD TY L+ LC + A +F M + + + TYT ++ A G+
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Query: 314 AFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
+ L F + G P+ VTY ++ G C G EEA + M E G P++
Sbjct: 480 GWDL--------FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 374 VSYCTVILGFCRIREPGKAYELKVEV 399
+Y T+I R + + EL E+
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEM 557
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 197 RLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
++++ L+L+DA+G+F M + P +V ++ L+S K+ + DL + +M + GI
Sbjct: 49 KVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL--VISLGEQMQNLGI 106
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
+ TY I C + +LS A + +M++ G P+ T L+N + + S+A
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
L D+M G+ P VT+ +++GL +A EA+ ++ M G PD V+Y
Sbjct: 167 LVDQMVE--------MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 377 CTVILGFCRIREPGKAYEL-------KVEVD 400
VI G C+ EP A L K+E D
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEAD 249
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 41/285 (14%)
Query: 100 DERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERT 159
D ++D+A+G+ M + P+++ F+ ++ + + M ++ + T
Sbjct: 53 DLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 112
Query: 160 YTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDL 219
Y+ I+ FC + A +L +M+ G+
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYG------------------------------ 142
Query: 220 SPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEA 279
P +VT N+L++ FC + +A + +MV G PD T+ L+ L + SEA
Sbjct: 143 -PSIVTLNSLLNGFCHGNR--ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 199
Query: 280 YDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHV 339
L M+ G P+ TY ++N G+ A +L ++M KG + V V
Sbjct: 200 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADV-------V 251
Query: 340 TYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
YN II GLC ++A + M G+ PD +Y +I C
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAEQ 82
N +I+GF + K+V E+ + +++G+ N+V+ R A+
Sbjct: 360 NTLIKGFC-------KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 83 VVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC 133
V + TYN L+ C + V+ A+ + M +R +K +++++ +++ LC
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 134 GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVA 193
G++ ++ K + P+ TYT+++ FC KG +A + EM + G P+
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 194 TYNRLIR-RLR 203
TYN LIR RLR
Sbjct: 533 TYNTLIRARLR 543
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 24/349 (6%)
Query: 76 RIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
R+ EA ++VD T N LV C + +V +A+ ++ M E G +PN +++
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
V+ +C G+ M ++++ D Y+ +I C G A + +EM
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 187 GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
GF + TYN LI R +D + R M +R +SP+VVT++ LI F +KE L
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF--VKEGKLR 350
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+A ++ EM+ +GI P+ TY LI C + RL EA + M+ G P+ T+ L+
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
N Y + L EM+ +G + + VTYN ++ G C G+ E A + +
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIA--------NTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 363 GMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISW-LGIW 410
M + PD VSY ++ G C E KA E+ +++++ + +GI+
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 151/304 (49%), Gaps = 14/304 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+T +N L+ C + RV EA+ ++ M E G KP LI+ N +V GLC G++
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M + P+E TY ++++ C G A ++L +M + Y+ +I L
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
L++A +F M + D++TYNTLI FC D ++ +M+ + I P+
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD--DGAKLLRDMIKRKISPNVV 334
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
T+ LI + + +L EA L +EM++ G++PN TY L++ + E + +A + D M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
K G P +T+N +I G C R ++ L + R M G+ + V+Y T++
Sbjct: 395 ISK--------GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 382 GFCR 385
GFC+
Sbjct: 447 GFCQ 450
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 158/349 (45%), Gaps = 30/349 (8%)
Query: 51 KVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGIL 110
KV A L+ E G + N V TY ++ C + AM +L
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEV----------------TYGPVLNVMCKSGQTALAMELL 251
Query: 111 RCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDK 170
R M ER +K + + ++ ++ GLC G + M K D TY +LI FC+
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 171 GHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTY 226
G K+L +MI SP+V T++ LI +L +A + + M +R ++P+ +TY
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 227 NTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM 286
N+LI FCK E LE+A +M M+ KG PD T+ LI C R+ + +LFREM
Sbjct: 372 NSLIDGFCK--ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 287 LRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIY 346
GV N TY L+ + G+ A L EM + P V+Y ++
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV--------RPDIVSYKILLD 481
Query: 347 GLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
GLC G E+AL + + + + D Y +I G C + A++L
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 155/321 (48%), Gaps = 14/321 (4%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E++ + T + ++ +C ++ A + + + G +P+ + FN ++ GLC + R+
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY--- 195
M + P T +L++ C G A ++ M+++GF P+ TY
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 196 -NRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
N + + + A+ + R M ER++ D V Y+ +I C K+ L+ AF + EM K
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC--KDGSLDNAFNLFNEMEIK 292
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G D TY LI C R + L R+M++ +SPN T++ L++++ EG+ +A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
L EM + G +P+ +TYN++I G C R EEA+ ++ M G PD +
Sbjct: 353 DQLLKEMMQR--------GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 375 SYCTVILGFCRIREPGKAYEL 395
++ +I G+C+ EL
Sbjct: 405 TFNILINGYCKANRIDDGLEL 425
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 149/317 (47%), Gaps = 32/317 (10%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR----------RIREAEQ 82
N +I GF G +K LL+ ++ + N V+ ++REA+Q
Sbjct: 302 NTLIGGFCNAGRWDDGAK-------LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 83 VVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC 133
++ E T TYN+L+ +C + R++EA+ ++ M +G P++++FN ++ G C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 134 GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVA 193
R+ M+ + + + TY +L+ FC G A+K+ EM+ P +
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 194 TYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKA 249
+Y L+ L LE A+ +F + + + D+ Y +I C + D A+++
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD--DAWDLFC 532
Query: 250 EMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEG 309
+ KG+ DA Y +I LC + LS+A LFR+M G +P+ TY L+ A+ +
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Query: 310 QFSKAFHLQDEMTHKGF 326
+ A L +EM GF
Sbjct: 593 DATTAAELIEEMKSSGF 609
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 148/326 (45%), Gaps = 39/326 (11%)
Query: 17 KLLRLSTCLRNRLSPP----NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSV 72
KLLR ++ ++SP +V+I F G L+ A +LLK ++G+ N++
Sbjct: 319 KLLR--DMIKRKISPNVVTFSVLIDSFVKEGKLRE-------ADQLLKEMMQRGIAPNTI 369
Query: 73 S----------GRRIREAEQVVD---------ETTTYNALVLAYCCDERVDEAMGILRCM 113
+ R+ EA Q+VD + T+N L+ YC R+D+ + + R M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 114 TERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHP 173
+ RG+ N +++N +VQG C G++ M + + PD +Y L+ CD G
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 174 GKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTL 229
KA ++ ++ S + Y +I + +++DA +F + + + D YN +
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549
Query: 230 ISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW 289
IS+ C+ + L KA + +M +G PD TY LIR + A +L EM
Sbjct: 550 ISELCR--KDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607
Query: 290 GVSPNNETYTGLMNAYRIEGQFSKAF 315
G + T ++N G+ K+F
Sbjct: 608 GFPADVSTVKMVINMLS-SGELDKSF 632
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 14/288 (4%)
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYT 161
+ D+A+ + R M + P +I FN + + + M K +A T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 162 SLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTER 217
+I+ FC A + +++ G+ P +N L+ L R+ +A+ + M E
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
P ++T NTL++ C + A + MV G P+ TY P++ +C + +
Sbjct: 188 GHKPTLITLNTLVNGLCL--NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
A +L R+M + + Y+ +++ +G AF+L +EM KGF
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF--------KAD 297
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
+TYN +I G C GR ++ +LR M + +SP+ V++ +I F +
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 14/229 (6%)
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A + +MI S P+V +NRL + + E + + + M + ++ + T + +I+
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
FC+ ++ L AF +++ G PD + L+ LCL+ R+SEA +L M+ G
Sbjct: 132 CFCRCRK--LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
P T L+N + G+ S A L D M TGF P+ VTY ++ +C
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE--------TGFQPNEVTYGPVLNVMCKS 241
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD 400
G+ A+ +LR M E + DAV Y +I G C+ A+ L E++
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
++ +DAV +FR M + P V+ +N L S K K+ +L + +M KGI
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYEL--VLALCKQMESKGIAHSIY 124
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
T +I C ++LS A+ ++++ G P+ + L+N +E + S+A L D M
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
G P+ +T N ++ GLCL G+ +A+ ++ M E G P+ V+Y V+
Sbjct: 185 VE--------MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 382 GFCRIREPGKAYELKVEVDENMI 404
C+ + A EL +++E I
Sbjct: 237 VMCKSGQTALAMELLRKMEERNI 259
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 32/365 (8%)
Query: 57 ELLKAGTEKGVESNS------VSGRRIREAEQVVD---------ETTTYNALVLAYCCDE 101
+++K G E V + S G R+ +A +V + YN ++ C
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYT 161
V++A+ + M G++ + +++N++V GLC GR M +D+ P+ T+T
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 162 SLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTER 217
++I +F +G +A K+ EM P V TYN LI L R+++A + M +
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
PDVVTYNTLI+ FCK K D + ++ EM +G++ D TY +I+ R
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVD--EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
A ++F M PN TY+ L+ + + KA L + M +
Sbjct: 367 AAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK--------SEIELD 415
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKV 397
TYN +I+G+C +G E+A + R + GL PD VSY T+I GFCR R+ K+ L
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Query: 398 EVDEN 402
++ E+
Sbjct: 476 KMQED 480
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 139/301 (46%), Gaps = 14/301 (4%)
Query: 104 DEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSL 163
D + + M G+ +L S+N V+ LC R M + PD T +SL
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145
Query: 164 IHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDL 219
I+ FC A ++S+M + GF P V YN +I + + DAV +F M +
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205
Query: 220 SPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEA 279
D VTYN+L++ C A + +MV + I+P+ T+ +I + + SEA
Sbjct: 206 RADAVTYNSLVAGLC--CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 280 YDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHV 339
L+ EM R V P+ TY L+N + G+ +A + D M KG LP V
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV--------V 315
Query: 340 TYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
TYN +I G C R +E + R M + GL D ++Y T+I G+ + P A E+ +
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 400 D 400
D
Sbjct: 376 D 376
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 17/297 (5%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E + V + TYN+LV CC R +A ++R M R + PN+I+F AV+ +G+
Sbjct: 201 ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 260
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M ++ + PD TY SLI+ C G +A+++L M+ G P V TYN L
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I + R+++ +FR M +R L D +TYNT+I + + PD A E+ + M +
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD--AAQEIFSRMDSR 378
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
P+ TY L+ LC+ R+ +A LF M + + + TY +++ G A
Sbjct: 379 ---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
+ L ++ K G P V+Y +I G C + +++ + R M E GL P
Sbjct: 436 WDLFRSLSCK--------GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+ LE+ + +F M + P +V ++ ++SK K K DL + E+ GI D
Sbjct: 48 MNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC--GIGHDLY 105
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+Y +I LC R A + +M+++G P+ T + L+N + + A L +M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
GF P V YN II G C +G +A+ + M G+ DAV+Y +++
Sbjct: 166 EE--------MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 382 GFC 384
G C
Sbjct: 218 GLC 220
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 17/223 (7%)
Query: 179 VLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFC 234
+ +MI S PS+ +++++ ++ + + +F M + D+ +YN +I+ C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 235 KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
+ A + +M+ G PD T LI C R+ +A DL +M G P+
Sbjct: 116 RCSR--FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRA 354
Y +++ G + A L D M G VTYN+++ GLC GR
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGV--------RADAVTYNSLVAGLCCSGRW 225
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFC---RIREPGKAYE 394
+A ++R M + P+ +++ VI F + E K YE
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 240 DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT 299
+LE+ ++ +M+ LP + ++ + + LF M G+ + +Y
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 300 GLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALG 359
++N +F A + +M G+ P VT +++I G C R +A+
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMK--------FGYEPDVVTVSSLINGFCQGNRVFDAID 160
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFEDTRKS 419
++ M E+G PD V Y T+I G C+I A EL ++ + + + T S
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV------TYNS 214
Query: 420 LMQGLSNEDTFSS---LMNDYLAQD 441
L+ GL +S LM D + +D
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRD 239
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 181/376 (48%), Gaps = 43/376 (11%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRI-------------- 77
PN + G V N+ +S + A ELL+ E+ ++ ++V I
Sbjct: 226 PNAVTYG--PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 78 -----REAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
E + + TYN L+ +C R D+ +LR M +R + PN+++F+ ++
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
+G++ M + +APD TYTSLI FC + H KA +++ M+ G P++
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 193 ATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
T+N LI + R++D + +FR M+ R + D VTYNTLI FC+L + ++ K E+
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK--ELF 461
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM----LRWGVSPNNETYTGLMNA 304
EMV + + P+ TY+ L+ LC +A ++F ++ + + N G+ NA
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 305 YRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGM 364
+++ A+ L + KG PG TYN +I GLC G EA + R M
Sbjct: 522 SKVD----DAWDLFCSLPLKGVKPGV--------KTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 365 PEIGLSPDAVSYCTVI 380
E G +PD +Y +I
Sbjct: 570 EEDGHAPDGWTYNILI 585
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 182/394 (46%), Gaps = 34/394 (8%)
Query: 44 NLQSESKKVGGAFELLKAGTEKGVESNSVSGR----------RIREAEQVVD-------- 85
N +K+ AF + + G E N+++ R+ EA ++VD
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 86 -ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXX 144
+ T N LV C + EAM ++ M E G +PN +++ V+ +C G+
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL-- 202
M ++++ D Y+ +I C G A + +EM G + ++ TYN LI
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 203 --RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
R +D + R M +R ++P+VVT++ LI F +KE L +A E+ EM+H+GI PD
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF--VKEGKLREAEELHKEMIHRGIAPDT 368
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
TY LI C + L +A + M+ G PN T+ L+N Y + L +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 321 MTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
M+ +G + VTYN +I G C LG+ A + + M + P+ V+Y ++
Sbjct: 429 MSLRGVVA--------DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 381 LGFCRIREPGKAYELKVEVDENMISW-LGIWGLF 413
G C E KA E+ +++++ + +GI+ +
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 32/317 (10%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR----------RIREAEQ 82
N++I GF G +K LL+ ++ + N V+ ++REAE+
Sbjct: 302 NILIGGFCNAGRWDDGAK-------LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 83 ---------VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC 133
+ +T TY +L+ +C + +D+A ++ M +G PN+ +FN ++ G C
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 134 GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVA 193
R+ M+ + + D TY +LI FC+ G A+++ EM+ P++
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 194 TYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKA 249
TY L+ L E A+ +F + + + D+ YN +I C + D A+++
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD--DAWDLFC 532
Query: 250 EMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEG 309
+ KG+ P TY +I LC + LSEA LFR+M G +P+ TY L+ A+ +G
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
Query: 310 QFSKAFHLQDEMTHKGF 326
+K+ L +E+ GF
Sbjct: 593 DATKSVKLIEELKRCGF 609
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 141/307 (45%), Gaps = 28/307 (9%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAE 81
PNV+ F+ + + + K+ A EL K +G+ ++++ + +A
Sbjct: 331 PNVVT--FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 82 QVVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
Q+VD T+N L+ YC R+D+ + + R M+ RG+ + +++N ++QG
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C G++ M + + P+ TY L+ CD G KA ++ ++ S +
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
YN +I + +++DA +F + + + P V TYN +I CK K P L +A +
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK-KGP-LSEAELLF 566
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
+M G PD TY LIR +++ L E+ R G S + T +++ +
Sbjct: 567 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS-D 625
Query: 309 GQFSKAF 315
G+ K+F
Sbjct: 626 GRLKKSF 632
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 14/223 (6%)
Query: 186 SGFSPSVATYNRLIRR----LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
S FS +Y +R ++ +DA+ +FR M P V+ ++ L S K K+ DL
Sbjct: 47 SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
A + E+ KGI + T +I C ++L A+ ++++ G PN T++ L
Sbjct: 107 VLALCKQMEL--KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 164
Query: 302 MNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVL 361
+N +EG+ S+A L D M G P +T N ++ GLCL G+ EA+ ++
Sbjct: 165 INGLCLEGRVSEALELVDRMVE--------MGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 362 RGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
M E G P+AV+Y V+ C+ + A EL +++E I
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 149/312 (47%), Gaps = 35/312 (11%)
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL---IRRLRLE 205
+ ++L+ ER + L+ + D A + +MI S P+V ++RL I + +
Sbjct: 50 SDRNLSYRERLRSGLVDIKADD-----AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 104
Query: 206 DAV-GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
D V + + M + ++ ++ T + +I+ FC+ ++ L AF +++ G P+ T+
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCL--AFSAMGKIIKLGYEPNTITFS 162
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI LCL+ R+SEA +L M+ G P+ T L+N + G+ ++A L D+M
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE- 221
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G P+ VTY ++ +C G+ A+ +LR M E + DAV Y +I G C
Sbjct: 222 -------YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 385 RIREPGKAYELKVEVD-----ENMISWLGIWGLF------EDTRKSLMQGLS-----NED 428
+ A+ L E++ N+I++ + G F +D K L + N
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 429 TFSSLMNDYLAQ 440
TFS L++ ++ +
Sbjct: 335 TFSVLIDSFVKE 346
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 174/369 (47%), Gaps = 28/369 (7%)
Query: 35 IIRGFTAVGNLQS------ESKKVGGAFELLKAGT-EKGVESNSVSGRRIREAEQVVDET 87
+I GF GNL+S + K+G +++ G G+ + +R + +++ ++
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 88 -----TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+N+L+ +C R DEA+ + R M G+KP++ +F V++ +GR+
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M + L PD Y +LI FC P ++ M + S +A N +I L
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD-LEKAFEMKAEMVHKGIL 257
R+EDA F + E + PD+VTYNT+I +C L+ D E+ FE+ ++ G
Sbjct: 612 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL-LKVTPFG-- 668
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
P+ T LI LC + A +F M G PN TY LM+ + +F L
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
+EM KG SPS V+Y+ II GLC GR +EA + + L PD V+Y
Sbjct: 729 FEEMQEKGI--------SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 780
Query: 378 TVILGFCRI 386
+I G+C++
Sbjct: 781 ILIRGYCKV 789
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 151/323 (46%), Gaps = 14/323 (4%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T+ L+ +C +D A + + M +RG++P+LI+++ ++ G G +
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
K + D ++S I ++ G A V M+ G SP+V TY LI+ L
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
R+ +A G++ + +R + P +VTY++LI FCK +L F + +M+ G PD
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG--NLRSGFALYEDMIKMGYPPDVVI 463
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y L+ L Q + A +ML + N + L++ + +F +A + M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
+ G P T+ ++ + GR EEAL + M ++GL PDA++YCT+I
Sbjct: 524 --------IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 383 FCRIREPGKAYELKVEVDENMIS 405
FC+ +P +L + N IS
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKIS 598
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 171/395 (43%), Gaps = 48/395 (12%)
Query: 32 PNVI-----IRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS------------- 73
PNV+ I GF G + AF+L K ++G+E + ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDR-------AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 74 -GRRIREAEQVVDETTTYNALVLAYCCDERVDE-----AMGILRCMTERGLKPNLISFNA 127
G + Q + + + +V + D V A + + M +G+ PN++++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 128 VVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG 187
+++GLC GR+ + ++ + P TY+SLI FC G+ + +MI G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 188 FSPSVATYNRLIRRLRLE----DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEK 243
+ P V Y L+ L + A+ M + + +VV +N+LI +C+L D +
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD--E 514
Query: 244 AFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMN 303
A ++ M GI PD T+ ++R ++ RL EA LF M + G+ P+ Y L++
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 304 AYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRG 363
A+ + + L D M S N +I+ L R E+A
Sbjct: 575 AFCKHMKPTIGLQLFDLMQR--------NKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 364 MPEIGLSPDAVSYCTVILGFCRIR---EPGKAYEL 395
+ E + PD V+Y T+I G+C +R E + +EL
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 661
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 153/351 (43%), Gaps = 35/351 (9%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
TY L+ C D R+ EA G+ + +RG++P+++++++++ G C G +
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE 450
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRL 202
M + PD Y L+ +G A + +M+ +V +N LI R
Sbjct: 451 DMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
R ++A+ VFR M + PDV T+ T++ + E LE+A + M G+ PDA
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMR--VSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN----NETYTGLMNAYRIEGQFSKAFH-- 316
Y LI C + + LF M R +S + N L +RIE SK F+
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA-SKFFNNL 627
Query: 317 -----LQDEMTHKGFLPGF-----------------VTGFSPSHVTYNAIIYGLCLLGRA 354
D +T+ + G+ VT F P+ VT +I+ LC
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 687
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMIS 405
+ A+ + M E G P+AV+Y ++ F + + +++L E+ E IS
Sbjct: 688 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 6/199 (3%)
Query: 101 ERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTY 160
R+++A + E ++P+++++N ++ G C R+ + P+ T
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 161 TSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTE 216
T LIH+ C A ++ S M + G P+ TY L+ + + +E + +F M E
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 217 RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRL 276
+ +SP +V+Y+ +I CK D +A + + + +LPD Y LIR C RL
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVD--EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 277 SEAYDLFREMLRWGVSPNN 295
EA L+ MLR GV P++
Sbjct: 793 VEAALLYEHMLRNGVKPDD 811
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TYN ++ YC R+DEA I + PN ++ ++ LC M
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RR 201
M +K P+ TY L+ F + K+ EM + G SPS+ +Y+ +I +R
Sbjct: 695 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
R+++A +F + L PDVV Y LI +CK+ L +A + M+ G+ PD
Sbjct: 755 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR--LVEAALLYEHMLRNGVKPD 810
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 186 SGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF 245
SG S + L + + A+ R + ER +V+ N ++ L +E A
Sbjct: 215 SGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG---LSVDQIEVAS 271
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY 305
+ + ++ G P+ T+ LI C + + A+DLF+ M + G+ P+ Y+ L++ Y
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 306 RIEGQFSKAFHLQDEMTHKGFLPGFVT---------------------------GFSPSH 338
G L + HKG V G SP+
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
VTY +I GLC GR EA G+ + + G+ P V+Y ++I GFC+
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 43/279 (15%)
Query: 157 ERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY-NRLIRRLRLEDAVGVFRGMT 215
+R T+L+ L + P A K SG PS T + LIR + A VF M
Sbjct: 68 QRNETNLV-LLSLESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMI 126
Query: 216 E------------RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
RD S D L+ C+ D KA E+ G++ D+
Sbjct: 127 TNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVD--KALEIFVYSTQLGVVIPQDSV 184
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG-LMNAYRIEGQFSKAFHLQDEMT 322
++ +L R+ D F ++ R G+ P+ + G +++A +G+ +KA +
Sbjct: 185 YRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVM 244
Query: 323 HKGFLPGFVT--------------------------GFSPSHVTYNAIIYGLCLLGRAEE 356
+GF G V+ G +P+ VT+ +I G C G +
Sbjct: 245 ERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 357 ALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
A + + M + G+ PD ++Y T+I G+ + G ++L
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 161/352 (45%), Gaps = 42/352 (11%)
Query: 74 GRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
G RI +A +VD+ T T+ L+ + EA+ ++ M +RG +P+L++
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+ AVV GLC +G M + + Y+++I C H A + +EM
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 185 DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
+ G P+V TY+ LI L R DA + M ER ++P++VT++ LI F +K+
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF--VKKGK 338
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
L KA ++ EM+ + I P+ TY LI C+ RL EA + M+R PN TY
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT---------------------------G 333
L+N + + K L EM+ +G + VT G
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458
Query: 334 FSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
P+ +TYN ++ GLC G+ +A+ V + + PD +Y +I G C+
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 157/317 (49%), Gaps = 14/317 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN L+ +C R+ A+ +L M + G +P++++ N+++ G C R+ M
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
+ PD T+T+LIH +A ++ M+ G P + TY N L +R
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ A+ + M + +VV Y+T+I CK + D A + EM +KG+ P+ TY
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED--DALNLFTEMENKGVRPNVITYS 292
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI LC R S+A L +M+ ++PN T++ L++A+ +G+ KA L +EM +
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P+ TY+++I G C+L R EA +L M P+ V+Y T+I GFC
Sbjct: 353 --------SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Query: 385 RIREPGKAYELKVEVDE 401
+ + K EL E+ +
Sbjct: 405 KAKRVDKGMELFREMSQ 421
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 14/279 (5%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
EA ++ Y+ ++ + C D+A+ + M +G++PN+I++++++ LC GR
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M ++ + P+ T+++LI F KG KA K+ EMI P++ TY+ L
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364
Query: 199 IRRLRLEDAVGVFRGMTE----RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I + D +G + M E +D P+VVTYNTLI+ FCK K D K E+ EM +
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD--KGMELFREMSQR 422
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G++ + TY LI + A +F++M+ GV PN TY L++ G+ +KA
Sbjct: 423 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
+ + + + P TYN +I G+C G+
Sbjct: 483 MVVFEYLQR--------STMEPDIYTYNIMIEGMCKAGK 513
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 45/286 (15%)
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+ L+DA+G+F M + P ++ ++ L+S K+ + DL +F K E++ GI +
Sbjct: 57 IELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEIL--GISHNLY 114
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
TY LI C RLS A L +M++ G P+ T L+N + + S A L D+M
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 322 THKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCLLGRA 354
G+ P VT G P VTY A++ GLC G
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE-----------NM 403
+ AL +L M + + V Y TVI C+ R A L E++ ++
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 404 ISWLGIWGLFEDTRKSLMQGLS-----NEDTFSSLMNDYLAQDESV 444
IS L +G + D + L + N TFS+L++ ++ + + V
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 170/351 (48%), Gaps = 33/351 (9%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
+VV + ++ L+ C ++++ +L +TE G PN++ + ++ G C KG +
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M + L +ERTYT LI+ G + ++ +M + G P++ TYN ++ +
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 202 L----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
L R +DA VF M ER +S ++VTYNTLI C +E L +A ++ +M GI
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC--REMKLNEANKVVDQMKSDGIN 335
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
P+ TY LI C +L +A L R++ G+SP+ TY L++ + +G S A +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 318 QDEMTHKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCL 350
EM +G P VT G P TY+ +I+G C+
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 351 LGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
G+ EA + + M E P+ V Y T+ILG+C+ +A +L E++E
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 143/287 (49%), Gaps = 14/287 (4%)
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGH 172
M E G+ PNL ++N V+ LC GR M ++ ++ + TY +LI C +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNT 228
+A KV+ +M G +P++ TYN LI +L A+ + R + R LSP +VTYN
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 229 LISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
L+S FC+ + D A +M EM +GI P TY LI T + +A L M
Sbjct: 379 LVSGFCR--KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGL 348
G+ P+ TY+ L++ + I+GQ ++A L M K P+ V YN +I G
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC--------EPNEVIYNTMILGY 488
Query: 349 CLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
C G + AL +L+ M E L+P+ SY +I C+ R+ +A L
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 154/332 (46%), Gaps = 15/332 (4%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
+ E+E + Y ++ +Y + ++ ++ M + G P FN ++ + G
Sbjct: 84 LTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSS 143
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
N+ + D ++ LI C+ G K+ +L E+ + GFSP+V Y
Sbjct: 144 SFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYT 202
Query: 197 RLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV 252
LI ++ +E A +F M + L + TY LI+ K ++ FEM +M
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL--FKNGVKKQGFEMYEKMQ 260
Query: 253 HKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFS 312
G+ P+ TY ++ LC R +A+ +F EM GVS N TY L+ E + +
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 313 KAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
+A + D+M G +P+ +TYN +I G C +G+ +AL + R + GLSP
Sbjct: 321 EANKVVDQMKSD--------GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 373 AVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
V+Y ++ GFCR + A ++ E++E I
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 124/266 (46%), Gaps = 15/266 (5%)
Query: 76 RIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
R ++A QV DE TYN L+ C + +++EA ++ M G+ PNLI++N
Sbjct: 283 RTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYN 342
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
++ G CG G++ + + L+P TY L+ FC KG A K++ EM +
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 187 GFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
G PS TY LI R +E A+ + M E L PDV TY+ LI FC + +
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC--IKGQMN 460
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+A + MV K P+ Y +I C + A L +EM ++PN +Y ++
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLP 328
E + +A L ++M G P
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 32/216 (14%)
Query: 17 KLLRLSTCLRNR-LSPP----NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNS 71
K L L L++R LSP N+++ GF G+ GA +++K E+G++ +
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD-------TSGAAKMVKEMEERGIKPSK 408
Query: 72 VS----------GRRIREAEQV---------VDETTTYNALVLAYCCDERVDEAMGILRC 112
V+ + +A Q+ V + TY+ L+ +C +++EA + +
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGH 172
M E+ +PN + +N ++ G C +G M +K+LAP+ +Y +I + C +
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAV 208
+A +++ +MIDSG PS + + LI R + + V
Sbjct: 529 SKEAERLVEKMIDSGIDPSTSILS-LISRAKNDSHV 563
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 167/343 (48%), Gaps = 15/343 (4%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
+LKA ++KG S+ + +V TYN LV YC + EA I+ M +
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
+ P+L ++N ++ GLC G M M L PD TY +LI + G +AR
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 178 KVLSEMIDSGFSPSVATYNRLIRRL-RLEDAVGVFRGMTE----RDLSPDVVTYNTLISK 232
K++ +M + G + T+N ++ L + E V R + E SPD+VTY+TLI
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
+ LK DL A EM EM KGI + T ++ LC +++L EA++L + G
Sbjct: 426 Y--LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
+ TY L+ + E + KA + DEM +P+ T+N++I GLC G
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKK--------VKITPTVSTFNSLIGGLCHHG 535
Query: 353 RAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+ E A+ + E GL PD ++ ++ILG+C+ KA+E
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 164/338 (48%), Gaps = 25/338 (7%)
Query: 73 SGRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGIL-RCMTERGLKPNL 122
S I A +V D+ T+N LV YC + ++++A+G+L R ++E + P+
Sbjct: 181 SSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDN 240
Query: 123 ISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSE 182
+++N +++ + KGR+ M + L P+ TY +L++ +C G +A +++
Sbjct: 241 VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 183 MIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE 238
M + P + TYN LI L + + + + M L PDVVTYNTLI +L
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG- 359
Query: 239 PDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW-GVSPNNET 297
LE A ++ +M + G+ + T+ ++ LC +++ +E++ G SP+ T
Sbjct: 360 LSLE-ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 298 YTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEA 357
Y L+ AY G S A + EM KG + +T N I+ LC + +EA
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGI--------KMNTITLNTILDALCKERKLDEA 470
Query: 358 LGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+L + G D V+Y T+I+GF R + KA E+
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 140/277 (50%), Gaps = 35/277 (12%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAEQ 82
+ +I+ + VG+L GA E+++ +KG++ N+++ R++ EA
Sbjct: 420 HTLIKAYLKVGDL-------SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 83 ----------VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+VDE T Y L++ + +E+V++A+ + M + + P + +FN+++ GL
Sbjct: 473 LLNSAHKRGFIVDEVT-YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C G+ + + L PD+ T+ S+I +C +G KA + +E I F P
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
T N L+ L E A+ F + E + D VTYNT+IS FCK K+ L++A+++
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDTVTYNTMISAFCKDKK--LKEAYDLL 648
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFRE 285
+EM KG+ PD TY I L +LSE +L ++
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 38/336 (11%)
Query: 96 AYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC---GKGRMXXXXXXXXXMNQKD 152
AY + + A+ I + M LKPNL++ N ++ GL + M +
Sbjct: 140 AYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIG 199
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS-GFSPSVATYNRLIRRL----RLEDA 207
++ + +T+ L++ +C +G A +L M+ +P TYN +++ + RL D
Sbjct: 200 VSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDL 259
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ M + L P+ VTYN L+ +CKL L++AF++ M +LPD TY LI
Sbjct: 260 KELLLDMKKNGLVPNRVTYNNLVYGYCKLG--SLKEAFQIVELMKQTNVLPDLCTYNILI 317
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
LC + E +L M + P+ TY L++ G +A L ++M + G
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVK 377
Query: 328 PGFVT----------------------------GFSPSHVTYNAIIYGLCLLGRAEEALG 359
VT GFSP VTY+ +I +G AL
Sbjct: 378 ANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
++R M + G+ + ++ T++ C+ R+ +A+ L
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 184/388 (47%), Gaps = 37/388 (9%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAE 81
P+++ +++ N SK++ A L+ E G + ++ + + EA
Sbjct: 151 PDIVT--LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 82 QVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+VD+ TY +V C +D A+ +L M +K N++ FN ++ L
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C + M K + P+ TY SLI+ C+ G A ++LS M++ +P+V
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
T+N LI +L +A + M +R + PD +TYN LI+ FC L++A +M
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC--MHNRLDEAKQMF 386
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
MV K LP+ TY LI C +R+ + +LFREM + G+ N TYT ++ +
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 309 GQFSKAFHLQDEMTHKGFLPGFVTGFSPSHV-TYNAIIYGLCLLGRAEEALGVLRGMPEI 367
G A +M K + V P+ + TY+ +++GLC G+ + AL + + + +
Sbjct: 447 GDCDSA-----QMVFKQMVSNRV----PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 368 GLSPDAVSYCTVILGFCRIREPGKAYEL 395
+ + Y T+I G C+ + G+A++L
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 154/317 (48%), Gaps = 14/317 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY+ + +C ++ A+ +L M + G +P++++ ++++ G C R+ M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
+ PD T+T+LIH +A ++ +M+ G P + TY N L +R +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ A+ + M + +VV +NT+I CK + +E A ++ EM KGI P+ TY
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH--VEVAVDLFTEMETKGIRPNVVTYN 297
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI LC R S+A L ML ++PN T+ L++A+ EG+ +A L +EM +
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P +TYN +I G C+ R +EA + + M P+ +Y T+I GFC
Sbjct: 358 --------SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 385 RIREPGKAYELKVEVDE 401
+ + EL E+ +
Sbjct: 410 KCKRVEDGVELFREMSQ 426
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 160/333 (48%), Gaps = 27/333 (8%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
EA ++ +N ++ + C V+ A+ + M +G++PN++++N+++ LC GR
Sbjct: 250 EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M +K + P+ T+ +LI F +G +A K+ EMI P TYN L
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I RL++A +F+ M +D P++ TYNTLI+ FCK K +E E+ EM +
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR--VEDGVELFREMSQR 427
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G++ + TY +I+ A +F++M+ V + TY+ L++ G+ A
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 315 F----HLQ-DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGL 369
+LQ EM F+ YN +I G+C G+ EA + + +
Sbjct: 488 LVIFKYLQKSEMELNIFI-------------YNTMIEGMCKAGKVGEAWDLF---CSLSI 531
Query: 370 SPDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
PD V+Y T+I G C R +A +L ++ E+
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 168/372 (45%), Gaps = 35/372 (9%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
NV+I F + + + + V A +L KG+ N V TYN
Sbjct: 256 ANVVI--FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV----------------TYN 297
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
+L+ C R +A +L M E+ + PN+++FNA++ +G++ M Q+
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDA 207
+ PD TY LI+ FC +A+++ M+ P++ TYN LI R+ED
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
V +FR M++R L + VTY T+I F + D + A + +MV + D TY L+
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGF--FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
LC +L A +F+ + + + N Y ++ G+ +A+ L ++ K
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK--- 532
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIR 387
P VTYN +I GLC +EA + R M E G P++ +Y T+I R
Sbjct: 533 --------PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDC 584
Query: 388 EPGKAYELKVEV 399
+ + EL E+
Sbjct: 585 DRAASAELIKEM 596
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 151/319 (47%), Gaps = 30/319 (9%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR----------RIREAE 81
PNV+ + ++ N + A LL EK + N V+ ++ EAE
Sbjct: 291 PNVVT--YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 82 QVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
++ +E T TYN L+ +C R+DEA + + M + PN+ ++N ++ G
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C R+ M+Q+ L + TYT++I F G A+ V +M+ + +
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
TY+ L+ L +L+ A+ +F+ + + ++ ++ YNT+I CK + + +A+++
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK--VGEAWDLF 526
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
+ I PD TY +I LC ++ L EA DLFR+M G PN+ TY L+ A +
Sbjct: 527 CSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583
Query: 309 GQFSKAFHLQDEMTHKGFL 327
+ + L EM GF+
Sbjct: 584 CDRAASAELIKEMRSSGFV 602
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 10/190 (5%)
Query: 196 NRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
NRL ++++DAV +F M + P +V +N L+S K+ + E + +M G
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNK--FELVISLGEQMQTLG 113
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
I D TY I C + +LS A + +M++ G P+ T + L+N Y + S A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVS 375
L D+M G+ P T+ +I+GL L +A EA+ ++ M + G PD V+
Sbjct: 174 ALVDQMVEM--------GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 376 YCTVILGFCR 385
Y TV+ G C+
Sbjct: 226 YGTVVNGLCK 235
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 165/354 (46%), Gaps = 46/354 (12%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
++ T+N ++ C + ++ +A G L M G+KP ++++N +VQG +GR+
Sbjct: 220 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSE------------------- 182
M K PD +TY ++ C++G + + + E
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSN 339
Query: 183 -------------MIDSGFSPSVATYNRLIRRLRLEDAVG----VFRGMTERDLSPDVVT 225
M+ G P+ TYN LI L +E+ + + R + E+ + D VT
Sbjct: 340 NGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVT 399
Query: 226 YNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFRE 285
YN LI+ +C+ D +KAF + EM+ GI P TY LI LC + + EA +LF +
Sbjct: 400 YNILINGYCQ--HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 286 MLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAII 345
++ G+ P+ LM+ + G +AF L EM + +P VTYN ++
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD--------MMSINPDDVTYNCLM 509
Query: 346 YGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
GLC G+ EEA ++ M G+ PD +SY T+I G+ + + A+ ++ E+
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 162/346 (46%), Gaps = 17/346 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+T T N ++ R++ A M +K N+ +FN ++ LC +G++
Sbjct: 189 KTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFL 248
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE 205
M + P TY +L+ F +G AR ++SEM GF P + TYN ++ + E
Sbjct: 249 GIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE 308
Query: 206 D-AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
A V R M E L PD V+YN LI + C DLE AF + EMV +G++P TY
Sbjct: 309 GRASEVLREMKEIGLVPDSVSYNILI-RGCS-NNGDLEMAFAYRDEMVKQGMVPTFYTYN 366
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI L ++ ++ A L RE+ G+ ++ TY L+N Y G KAF L DEM
Sbjct: 367 TLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM--- 423
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G P+ TY ++IY LC + EA + + G+ PD V T++ G C
Sbjct: 424 -----MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 478
Query: 385 RIREPGKAYELKVEVDENMISWLGIWGLFEDTRKSLMQGLSNEDTF 430
I +A+ L E+D I+ + T LM+GL E F
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDV------TYNCLMRGLCGEGKF 518
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 158/310 (50%), Gaps = 16/310 (5%)
Query: 77 IREAEQV--VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCG 134
+RE +++ V ++ +YN L+ + ++ A M ++G+ P ++N ++ GL
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 374
Query: 135 KGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
+ ++ + +K + D TY LI+ +C G KA + EM+ G P+ T
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434
Query: 195 YNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAE 250
Y LI R+ + +A +F + + + PD+V NTL+ C + ++++AF + E
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG--NMDRAFSLLKE 492
Query: 251 MVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQ 310
M I PD TY L+R LC + + EA +L EM R G+ P++ +Y L++ Y +G
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
AF ++DEM GF+P+ +TYNA++ GL E A +LR M G+
Sbjct: 553 TKHAFMVRDEMLS--------LGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604
Query: 371 PDAVSYCTVI 380
P+ S+C+VI
Sbjct: 605 PNDSSFCSVI 614
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 20/289 (6%)
Query: 33 NVIIRGFTAVGNLQ------SESKKVGGAFELLKAGT-------EKGVESNSVSGRRIRE 79
N++IRG + G+L+ E K G T E +E+ + R IRE
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 80 AEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
V+D + TYN L+ YC +A + M G++P ++ +++ LC K +
Sbjct: 391 KGIVLD-SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI 199
+ K + PD +L+ C G+ +A +L EM +P TYN L+
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 200 RRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
R L + E+A + M R + PD ++YNTLIS + K + D + AF ++ EM+ G
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK--KGDTKHAFMVRDEMLSLG 567
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNA 304
P TY L++ L Q A +L REM G+ PN+ ++ ++ A
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 30/227 (13%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAEQ 82
N++I G+ G ++KK AF L G++ + + REA++
Sbjct: 401 NILINGYCQHG----DAKK---AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 83 VVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC 133
+ ++ N L+ +C +D A +L+ M + P+ +++N +++GLC
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 134 GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVA 193
G+G+ M ++ + PD +Y +LI + KG A V EM+ GF+P++
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLL 573
Query: 194 TYNRLIRRLRL----EDAVGVFRGMTERDLSPDVVTYNTLISKFCKL 236
TYN L++ L E A + R M + P+ ++ ++I L
Sbjct: 574 TYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 23/175 (13%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNA 92
N ++ G A+GN+ AF LLK + + V TYN
Sbjct: 471 NTLMDGHCAIGNMDR-------AFSLLKEMDMMSINPDDV----------------TYNC 507
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ C + + +EA ++ M RG+KP+ IS+N ++ G KG M
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDA 207
P TY +L+ A ++L EM G P+ +++ +I + DA
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDA 622
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 158/326 (48%), Gaps = 35/326 (10%)
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L++A + R + + + M R ++PN+ +FN V+ LC G+M M
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 153 LAPDERTYTSLIHLFCDKGHPGK---ARKVLSEMIDSGFSPSVATYNRLIRRLRLED--- 206
+P+ +Y +LI +C G GK A VL EM+++ SP++ T+N LI +D
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 207 -AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
++ VF+ M ++D+ P+V++YN+LI+ C + +A M+ +MV G+ P+ TY
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCN--GGKISEAISMRDKMVSAGVQPNLITYNA 371
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
LI C L EA D+F + G P Y L++AY G+ F L++EM +G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 326 FLPG------FVTGFS--------------------PSHVTYNAIIYGLCLLGRAEEALG 359
+P + G P VT++ ++ G C G + +A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAM 491
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCR 385
+L+ M ++GL P ++Y V+ G+C+
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCK 517
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 165/362 (45%), Gaps = 37/362 (10%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
PNV F V N ++ K+ A ++++ G N VS YN
Sbjct: 221 PNVFT--FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVS----------------YN 262
Query: 92 ALVLAYC---CDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
L+ YC + ++ +A +L+ M E + PNL +FN ++ G + M
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
+D+ P+ +Y SLI+ C+ G +A + +M+ +G P++ TYN LI + L
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
++A+ +F + + P YN LI +CKL + D F +K EM +GI+PD TY
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID--DGFALKEEMEREGIVPDVGTYN 440
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI LC + A LF ++ G+ P+ T+ LM Y +G+ KA L EM+
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSK- 498
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGM-PEIGLSPDAVSYCTVILGF 383
G P H+TYN ++ G C G + A + M E L + SY ++ G+
Sbjct: 499 -------MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 384 CR 385
+
Sbjct: 552 SQ 553
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 156/359 (43%), Gaps = 75/359 (20%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC---GKGRMXXXXXXX 145
T+N ++ A C ++++A ++ M G PN++S+N ++ G C G G+M
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 146 XXMNQKDLAPDERTYTSLIHLFC-DKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL-- 202
M + D++P+ T+ LI F D PG + KV EM+D P+V +YN LI L
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPG-SMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 203 --RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
++ +A+ + M + P+++TYN LI+ FCK L++A +M + +G +P
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCK--NDMLKEALDMFGSVKGQGAVPTT 401
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
Y LI C ++ + + L EM R G+ P+ TY L+ G A L D+
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 321 MTHKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLC---- 349
+T KG LP VT G P H+TYN ++ G C
Sbjct: 462 LTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN 520
Query: 350 --------------------------LL------GRAEEALGVLRGMPEIGLSPDAVSY 376
LL G+ E+A +L M E GL P+ ++Y
Sbjct: 521 LKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 156/367 (42%), Gaps = 53/367 (14%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
I + V + + LVLAY + R + + G K + +S ++ L +
Sbjct: 143 ISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKEN 202
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
R M ++ + P+ T+ +I+ C G KAR V+ +M G SP+V +YN
Sbjct: 203 RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYN 262
Query: 197 RLIR---------RLRLEDAV---------------------------------GVFRGM 214
LI ++ DAV VF+ M
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
++D+ P+V++YN+LI+ C + +A M+ +MV G+ P+ TY LI C
Sbjct: 323 LDQDVKPNVISYNSLINGLC--NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
L EA D+F + G P Y L++AY G+ F L++EM +G +P
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV---- 436
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
TYN +I GLC G E A + + GL PD V++ ++ G+CR E KA
Sbjct: 437 ----GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAM 491
Query: 395 LKVEVDE 401
L E+ +
Sbjct: 492 LLKEMSK 498
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 143/325 (44%), Gaps = 43/325 (13%)
Query: 21 LSTCLRNRLSPP----NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRR 76
L + N +SP N++I GF NL G+ ++ K ++ V+ N +S
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLP-------GSMKVFKEMLDQDVKPNVIS--- 333
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
YN+L+ C ++ EA+ + M G++PNLI++NA++ G C
Sbjct: 334 -------------YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
+ + + P R Y LI +C G + EM G P V TYN
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 197 RLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV 252
LI R +E A +F +T + L PD+VT++ L+ +C+ E KA + EM
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGES--RKAAMLLKEMS 497
Query: 253 HKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM-----LRWGVSPNNETYTGLMNAYRI 307
G+ P TY +++ C + L A ++ +M LR V+ +Y L+ Y
Sbjct: 498 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA----SYNVLLQGYSQ 553
Query: 308 EGQFSKAFHLQDEMTHKGFLPGFVT 332
+G+ A L +EM KG +P +T
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRIT 578
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 28/285 (9%)
Query: 179 VLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFC 234
V EMI P+V T+N +I L ++ A V M SP+VV+YNTLI +C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 235 KLK-EPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
KL + KA + EMV + P+ T+ LI L + +F+EML V P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
N +Y L+N G+ S+A ++D+M G P+ +TYNA+I G C
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVS--------AGVQPNLITYNALINGFCKNDM 381
Query: 354 AEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD-ENMISWLGIW-- 410
+EAL + + G P Y +I +C++ + + LK E++ E ++ +G +
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 411 --------GLFEDTRKSLMQ----GLSNEDTFSSLMNDYLAQDES 443
G E +K Q GL + TF LM Y + ES
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGES 486
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
+ + V T YN L+ AYC ++D+ + M G+ P++ ++N ++ GLC G +
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
+ K L PD T+ L+ +C KG KA +L EM G P TYN +
Sbjct: 453 EAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIV 511
Query: 199 IRRLRLEDAVGVFRGM-----TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH 253
++ E + M ER L +V +YN L+ + + + LE A + EM+
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ--KGKLEDANMLLNEMLE 569
Query: 254 KGILPDADTYE 264
KG++P+ TYE
Sbjct: 570 KGLVPNRITYE 580
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 18/314 (5%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ T+ L+ CC+ RV +A+ ++ M E G +P + ++ GLC G
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLL 64
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RR 201
M + + Y ++I C GH A+ + +EM D G P V TY+ +I R
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
R DA + R M ER ++PDVVT++ LI+ +KE + +A E+ +M+ +GI P
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINAL--VKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
TY +I C Q RL++A + M SP+ T++ L+N Y + + EM
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+G + + VTY +I+G C +G + A +L M G++P+ +++ +++
Sbjct: 243 HRRGIVA--------NTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 382 GFCRIREPGKAYEL 395
C +E KA+ +
Sbjct: 295 SLCSKKELRKAFAI 308
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 143/287 (49%), Gaps = 18/287 (6%)
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGH 172
M E G +P++++F ++ GLC +GR+ M ++ P Y ++I+ C G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE----DAVGVFRGMTERDLSPDVVTYNT 228
A +LS+M ++ V YN +I RL + A +F M ++ + PDV+TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 229 LISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
+I FC+ A ++ +M+ + I PD T+ LI L + ++SEA +++ +MLR
Sbjct: 117 MIDSFCR--SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGL 348
G+ P TY +++ + + + + A + D M K SP VT++ +I G
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC--------SPDVVTFSTLINGY 226
Query: 349 CLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
C R + + + M G+ + V+Y T+I GFC++ + A +L
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 273
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 139/300 (46%), Gaps = 19/300 (6%)
Query: 76 RIREAEQVVDETTT-----YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
R+ +A +VD Y ++ C + A+ +L M E +K +++ +NA++
Sbjct: 25 RVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID 84
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
LC G M+ K + PD TY+ +I FC G A ++L +MI+ +P
Sbjct: 85 RLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINP 144
Query: 191 SVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFE 246
V T++ LI L ++ +A ++ M R + P +TYN++I FC K+ L A
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFC--KQDRLNDAKR 202
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
M M K PD T+ LI C +R+ ++F EM R G+ N TYT L++ +
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262
Query: 307 IEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPE 366
G A L + M +G +P+++T+ +++ LC +A +L + +
Sbjct: 263 QVGDLDAAQDLLNVM--------ISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 10/245 (4%)
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGM 214
PD T+T+L++ C +G +A ++ M++ G P N L + E A+ + M
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKM 67
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
E + VV YN +I + CK + A + EM KGI PD TY +I + C
Sbjct: 68 EETHIKAHVVIYNAIIDRLCK--DGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSG 125
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
R ++A L R+M+ ++P+ T++ L+NA EG+ S+A + +M +G P
Sbjct: 126 RWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP------ 179
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
+ +TYN++I G C R +A +L M SPD V++ T+I G+C+ + E
Sbjct: 180 --TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 395 LKVEV 399
+ E+
Sbjct: 238 IFCEM 242
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
L+K G K E+ + G +R + T TYN+++ +C +R+++A +L M +
Sbjct: 156 LVKEG--KVSEAEEIYGDMLRRG--IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
P++++F+ ++ G C R+ M+++ + + TYT+LIH FC G A+
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 178 KVLSEMIDSGFSPSVATYNRLIRRL 202
+L+ MI SG +P+ T+ ++ L
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLASL 296
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 196/437 (44%), Gaps = 54/437 (12%)
Query: 15 PMKLLRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSG 74
P LRL + ++ NV+ T VG E+ K G +EL GV +
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYC-TVVGGFYEENFKAEG-YELFGKMLASGVSLCLSTF 219
Query: 75 RR----------IREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTE 115
+ ++E E+++D+ TYN + C +D A+ ++ C+ E
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 116 RGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGK 175
+G KP++I++N ++ GLC + M + L PD TY +LI +C G
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRLRLED----AVGVFRGMTERDLSPDVVTYNTLIS 231
A +++ + + +GF P TY LI L E A+ +F + + P+V+ YNTLI
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
+ + +A ++ EM KG++P+ T+ L+ LC +S+A L + M+ G
Sbjct: 400 GLS--NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT------------------- 332
P+ T+ L++ Y + + A + D M G P T
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 333 --------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G +P+ T+N ++ LC + +EALG+L M ++PDAV++ T+I GFC
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 385 RIREPGKAYELKVEVDE 401
+ + AY L +++E
Sbjct: 578 KNGDLDGAYTLFRKMEE 594
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 185/407 (45%), Gaps = 34/407 (8%)
Query: 19 LRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----- 73
+R+ CL + P+VI G ++ K A L +G+E +S +
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYG--LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 74 -----GRRIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLK 119
G ++ AE++V + TY +L+ C + + A+ + +G+K
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 120 PNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKV 179
PN+I +N +++GL +G + M++K L P+ +T+ L++ C G A +
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 180 LSEMIDSGFSPSVATYNRLIR----RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK 235
+ MI G+ P + T+N LI +L++E+A+ + M + + PDV TYN+L++ CK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 236 LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
+ E E MV KG P+ T+ L+ +LC ++L EA L EM V+P+
Sbjct: 509 TSK--FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 296 ETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAE 355
T+ L++ + G A+ L +M S S TYN II+
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEE-------AYKVSSSTPTYNIIIHAFTEKLNVT 619
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
A + + M + L PD +Y ++ GFC+ Y+ +E+ EN
Sbjct: 620 MAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 145/299 (48%), Gaps = 17/299 (5%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
++ E T+N LV C V +A G+++ M +G P++ +FN ++ G + +M
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M + PD TY SL++ C + M++ G +P++ T+N L+ L
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM--KAEMVHKGI 256
+L++A+G+ M + ++PD VT+ TLI FC K DL+ A+ + K E +K +
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC--KNGDLDGAYTLFRKMEEAYK-V 598
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
TY +I + ++ A LF+EM+ + P+ TY +++ + G + +
Sbjct: 599 SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYK 658
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVS 375
EM GF+ PS T +I LC+ R EA G++ M + GL P+AV+
Sbjct: 659 FLLEMMENGFI--------PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 167/423 (39%), Gaps = 90/423 (21%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+YNA++ D+A + M +RG+ P++ SF ++ C R M
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
Query: 149 NQ-------------------------------KDLAPDE----RTYTSLIHLFCDKGHP 173
+ K LA T+ L+ + C KG
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDV 232
Query: 174 GKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTL 229
+ K+L ++I G P++ TYN I+ L L+ AV + + E+ PDV+TYN L
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 230 ISKFCKLK-----------------EPD----------------LEKAFEMKAEMVHKGI 256
I CK EPD ++ A + + V G
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
+PD TY LI LC + + A LF E L G+ PN Y L+ +G +A
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ 412
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
L +EM+ KG + P T+N ++ GLC +G +A G+++ M G PD ++
Sbjct: 413 LANEMSEKGLI--------PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Query: 377 CTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFED--TRKSLMQGLSNEDTFSSLM 434
+I G+ + +LK+E ++ + G+ D T SL+ GL F +M
Sbjct: 465 NILIHGY--------STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 435 NDY 437
Y
Sbjct: 517 ETY 519
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 180/378 (47%), Gaps = 41/378 (10%)
Query: 58 LLKAGTEKG--VESNSV-SGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMT 114
LL +KG VE+ V S R R+ VV + +++++ + +D+A+ +
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRD---VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
E GL P+ + + ++QG C KG + M Q+ A D TY +++H C + G
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 175 KARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLI 230
+A K+ +EM + P T LI + L++A+ +F+ M E+ + DVVTYNTL+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
F K+ D++ A E+ A+MV K ILP +Y L+ LC + L+EA+ ++ EM+
Sbjct: 523 DGFGKV--GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP----------GFVT-------- 332
+ P ++ Y G S ++M +GF+P GFV
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 333 -----------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
G P TYN+I++G C + +EA VLR M E G++PD +Y +I
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 382 GFCRIREPGKAYELKVEV 399
GF +A+ + E+
Sbjct: 701 GFVSQDNLTEAFRIHDEM 718
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 30/325 (9%)
Query: 29 LSPPNVI----IRGFTAVG------NLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIR 78
L P NVI I+G+ G NL++E + G A +++ T + + +
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT---ILHGLCKRKMLG 462
Query: 79 EAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVV 129
EA+++ +E T T L+ +C + AM + + M E+ ++ +++++N ++
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 130 QGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFS 189
G G + M K++ P +Y+ L++ C KGH +A +V EMI
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 190 PSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF 245
P+V N +I R D M PD ++YNTLI F ++E ++ KAF
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF--VREENMSKAF 640
Query: 246 EM--KAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMN 303
+ K E G++PD TY ++ C Q ++ EA + R+M+ GV+P+ TYT ++N
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 304 AYRIEGQFSKAFHLQDEMTHKGFLP 328
+ + ++AF + DEM +GF P
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 153/311 (49%), Gaps = 14/311 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T N +V A C D ++++ L + E+G+ P+++++N ++ KG M M
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
K +P TY ++I+ C G +A++V +EM+ SG SP TY L+ ++ +
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ VF M RD+ PD+V +++++S F + +L+KA + G++PD Y
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFT--RSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI+ C + +S A +L EML+ G + + TY +++ +A L +EMT +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P T +I G C LG + A+ + + M E + D V+Y T++ GF
Sbjct: 475 ALF--------PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 385 RIREPGKAYEL 395
++ + A E+
Sbjct: 527 KVGDIDTAKEI 537
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 162/346 (46%), Gaps = 23/346 (6%)
Query: 72 VSGRRIREAEQVVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNL 122
V R++REA + NAL+ + V+ A G+ + ++ G+ N+
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 123 ISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSE 182
+ N +V LC G+M + +K + PD TY +LI + KG +A ++++
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 183 MIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE 238
M GFSP V TYN +I L + E A VF M LSPD TY +L+ + C K+
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC--KK 353
Query: 239 PDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETY 298
D+ + ++ ++M + ++PD + ++ L +A F + G+ P+N Y
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 299 TGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEAL 358
T L+ Y +G S A +L++EM + G + VTYN I++GLC EA
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQ--------GCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 359 GVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
+ M E L PD+ + +I G C++ A EL ++ E I
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 147/338 (43%), Gaps = 33/338 (9%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
+ + V + TYN L+ AY ++EA ++ M +G P + ++N V+ GLC G+
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M + L+PD TY SL+ C KG + KV S+M P + ++ +
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
+ R L+ A+ F + E L PD V Y LI +C ++ + A ++ EM+ +
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC--RKGMISVAMNLRNEMLQQ 439
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G D TY ++ LC ++ L EA LF EM + P++ T T L++ + G A
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 315 FHLQDEMTHKGFLPGFVT------GFS---------------------PSHVTYNAIIYG 347
L +M K VT GF P+ ++Y+ ++
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 348 LCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
LC G EA V M + P + ++I G+CR
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 125/269 (46%), Gaps = 31/269 (11%)
Query: 34 VIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNAL 93
++I G +GNLQ+ A EL + EK RIR + TYN L
Sbjct: 485 ILIDGHCKLGNLQN-------AMELFQKMKEK----------RIRL------DVVTYNTL 521
Query: 94 VLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDL 153
+ + +D A I M + + P IS++ +V LC KG + M K++
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 154 APDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVG 209
P S+I +C G+ L +MI GF P +YN LI R + A G
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 210 VFRGMTERD--LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ + M E L PDV TYN+++ FC+ + +++A + +M+ +G+ PD TY +I
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCR--QNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNE 296
Q L+EA+ + EML+ G SP+++
Sbjct: 700 NGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 171/327 (52%), Gaps = 17/327 (5%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ Y +LV C R +A +LR MT+R +KP++I+FNA++ +G+
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELY 270
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M + +AP+ TYTSLI+ FC +G +AR++ M G P V Y LI
Sbjct: 271 NEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 330
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+++DA+ +F M+++ L+ + +TY TLI F ++ +P++ + E+ + MV +G+ P+
Sbjct: 331 KKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ--EVFSHMVSRGVPPNIR 388
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRW---GVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
TY L+ LC ++ +A +F +M + GV+PN TY L++ G+ KA +
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
++M + +TY II G+C G+ + A+ + +P G+ P+ V+Y T
Sbjct: 449 EDMRKREM--------DIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500
Query: 379 VILGFCRIREPGKAYELKVEVDENMIS 405
+I G R +A+ L ++ E+ +S
Sbjct: 501 MISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 149/306 (48%), Gaps = 17/306 (5%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ T+ +L+ +C R++EAM ++ M E G+KP+++ + ++ LC G +
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M + PD YTSL++ C+ G A +L M P V T+N LI
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+ DA ++ M ++P++ TY +LI+ FC E +++A +M M KG PD
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC--MEGCVDEARQMFYLMETKGCFPDVV 318
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
Y LI C +++ +A +F EM + G++ N TYT L+ + GQ K Q+
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF---GQVGKPNVAQEVF 375
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPE---IGLSPDAVSYCT 378
+H G P+ TYN +++ LC G+ ++AL + M + G++P+ +Y
Sbjct: 376 SHM-----VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 379 VILGFC 384
++ G C
Sbjct: 431 LLHGLC 436
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 165/373 (44%), Gaps = 20/373 (5%)
Query: 56 FELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTE 115
F+L + KG ++S R+ + V Y ++ + +EA+ + M E
Sbjct: 6 FQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVE 65
Query: 116 RGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGK 175
P++I F ++ + + + ++ D T L++ FC P
Sbjct: 66 SRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYL 125
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A L +M+ GF P + T+ LI R+E+A+ + M E + PDVV Y T+I
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
CK + A + +M + GI PD Y L+ LC R +A L R M + +
Sbjct: 186 SLCK--NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
P+ T+ L++A+ EG+F A L +EM +P+ TY ++I G C+
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIR--------MSIAPNIFTYTSLINGFCME 295
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWG 411
G +EA + M G PD V+Y ++I GFC+ ++ A ++ E+ + ++ I
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI-- 353
Query: 412 LFEDTRKSLMQGL 424
T +L+QG
Sbjct: 354 ----TYTTLIQGF 362
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 9/223 (4%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
+ E + + Y +L+ +C ++VD+AM I M+++GL N I++ ++QG G
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMID---SGFSPSVA 193
+ M + + P+ RTY L+H C G KA + +M G +P++
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 194 TYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKA 249
TYN L+ L +LE A+ VF M +R++ ++TY +I CK + ++ A +
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK--VKNAVNLFC 484
Query: 250 EMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
+ KG+ P+ TY +I L + EA+ LFR+M GVS
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 25/207 (12%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
P+V+ +T++ N + KKV A ++ ++KG+ N T TY
Sbjct: 315 PDVV--AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN----------------TITYT 356
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
L+ + + + A + M RG+ PN+ ++N ++ LC G++ M ++
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 152 DL---APDERTYTSLIHLFCDKGHPGKARKVLSEM----IDSGFSPSVATYNRLIRRLRL 204
++ AP+ TY L+H C G KA V +M +D G + + ++
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLIS 231
++AV +F + + + P+VVTY T+IS
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMIS 503
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 160/339 (47%), Gaps = 33/339 (9%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
T+ +LV +C R EAM ++ + G +PN++ +N ++ LC KG++
Sbjct: 150 VTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKH 209
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLR 203
M + + PD TY SLI G G + ++LS+M+ G SP V T++ LI + +
Sbjct: 210 MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ 269
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
L +A + M +R ++P++VTYN+LI+ C L++A ++ +V KG P+A TY
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI--HGLLDEAKKVLNVLVSKGFFPNAVTY 327
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
LI C +R+ + + M R GV + TY L Y G+FS A + M
Sbjct: 328 NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 324 KGFLPGFVT------GFSPSH---------------------VTYNAIIYGLCLLGRAEE 356
G P T G +TYN II GLC + E+
Sbjct: 388 CGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVED 447
Query: 357 ALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
A + + G+SPD ++Y T+++G R R +A+EL
Sbjct: 448 AWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 141/325 (43%), Gaps = 14/325 (4%)
Query: 72 VSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQG 131
+S R E + + ++ L+ +C R+ A+ L M + G +P++++F ++V G
Sbjct: 99 ISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNG 158
Query: 132 LCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPS 191
C R + P+ Y ++I C+KG A VL M G P
Sbjct: 159 FCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPD 218
Query: 192 VATYNRLIRRLRLEDAVGV----FRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM 247
V TYN LI RL GV M +SPDV+T++ LI + KE L +A +
Sbjct: 219 VVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG--KEGQLLEAKKQ 276
Query: 248 KAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRI 307
EM+ + + P+ TY LI LC+ L EA + ++ G PN TY L+N Y
Sbjct: 277 YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY-- 334
Query: 308 EGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEI 367
KA + D M K G TYN + G C G+ A VL M
Sbjct: 335 ----CKAKRVDDGM--KILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSC 388
Query: 368 GLSPDAVSYCTVILGFCRIREPGKA 392
G+ PD ++ ++ G C + GKA
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKA 413
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 143/300 (47%), Gaps = 14/300 (4%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
++ L++A + + + + R + G+ +L SF ++ C R+ M
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
+ P T+ SL++ FC +A ++ +++ G+ P+V YN +I L ++
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A+ V + M + + PDVVTYN+LI++ + + ++M+ GI PD T+
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRL--FHSGTWGVSARILSDMMRMGISPDVITFSA 259
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
LI + +L EA + EM++ V+PN TY L+N I G +A + + + KG
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
F P+ VTYN +I G C R ++ + +L M G+ D +Y T+ G+C+
Sbjct: 320 FF--------PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQ 371
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 14/290 (4%)
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYT 161
+ ++A+ + M E P+++ F+ ++ + + + ++ D ++T
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 162 SLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTER 217
+LI FC A L +M+ GF PS+ T+ L+ R +A+ + +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
P+VV YNT+I C ++ + A ++ M GI PD TY LI L
Sbjct: 179 GYEPNVVIYNTIIDSLC--EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
+ + +M+R G+SP+ T++ L++ Y EGQ +A +EM + +P+
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR--------SVNPN 288
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIR 387
VTYN++I GLC+ G +EA VL + G P+AV+Y T+I G+C+ +
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAK 338
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 137/321 (42%), Gaps = 28/321 (8%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESN-----------------SVSG 74
PNV+I + + + E +V A ++LK + G+ + VS
Sbjct: 182 PNVVI--YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 75 RRIREAEQ--VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
R + + + + + T++AL+ Y + ++ EA M +R + PN++++N+++ GL
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C G + + K P+ TY +LI+ +C K+L M G
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
TYN L + + A V M + PD+ T+N L+ C + KA
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLC--DHGKIGKALVRL 417
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
++ + TY +I+ LC ++ +A+ LF + GVSP+ TY +M R +
Sbjct: 418 EDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477
Query: 309 GQFSKAFHLQDEMTHK-GFLP 328
+ +A L +M + G +P
Sbjct: 478 RLWREAHELYRKMQKEDGLMP 498
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 159/331 (48%), Gaps = 16/331 (4%)
Query: 84 VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX 143
V +T T NAL+ C ++DEA I + + RG + +S+N ++ G CGK ++
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 144 XXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI---- 199
M ++ L PD TY+ LI + +A + + +G P V TY+ +I
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 200 RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+ R E+ F M +++ P+ V YN LI +C+ L A E++ +M HKGI P+
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR--SGRLSMALELREDMKHKGISPN 679
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
+ TY LI+ + + R+ EA LF EM G+ PN YT L++ Y GQ K L
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
EM K P+ +TY +I G G EA +L M E G+ PD+++Y
Sbjct: 740 EMHSKNV--------HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 380 ILGFCRIREPGKAYELKVEVDENMISWLGIW 410
I G+ +++ G K +EN + + W
Sbjct: 792 IYGY--LKQGGVLEAFKGSDEENYAAIIEGW 820
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 174/412 (42%), Gaps = 75/412 (18%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSV----------SGRRIREAEQ 82
+++++G T +K++G A+ +LK T+KG N + + +A +
Sbjct: 334 SILVKGLT-------RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 83 VVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVV---- 129
+ D ++TYN L+ YC + + D A +L+ M G N SF +V+
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Query: 130 -------------------------------QGLCGKGRMXXXXXXXXXMNQKDLAPDER 158
GLC G+ K D R
Sbjct: 447 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 506
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----RLRLEDAVGVFRGM 214
T +L+H C+ G +A ++ E++ G +YN LI + +L++A M
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
+R L PD TY+ LI + + +E+A + + G+LPD TY +I C +
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNK--VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
R E + F EM+ V PN Y L+ AY G+ S A L+++M HK G
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK--------GI 676
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
SP+ TY ++I G+ ++ R EEA + M GL P+ Y +I G+ ++
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 141/308 (45%), Gaps = 14/308 (4%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
+ + A+C +V+EA+ + M E G+ PN+++FN V+ GL GR M
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
++ + P TY+ L+ G A VL EM GF P+V YN LI L
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A+ + M + LS TYNTLI +CK + D A + EM+ G + ++
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD--NAERLLKEMLSIGFNVNQGSFTS 440
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+I LC A EML +SP T L++ G+ SKA L + +KG
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
F+ T NA+++GLC G+ +EA + + + G D VSY T+I G C
Sbjct: 501 FVVDTRTS--------NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 386 IREPGKAY 393
++ +A+
Sbjct: 553 KKKLDEAF 560
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 159/393 (40%), Gaps = 67/393 (17%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
P+V + FT N + KV A +L E GV N V T+N
Sbjct: 258 PDVYL--FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVV----------------TFN 299
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
++ R DEA M ERG++P LI+++ +V+GL R+ M +K
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----------- 200
P+ Y +LI F + G KA ++ M+ G S + +TYN LI+
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 201 ----------------------------RLRLEDAVGVFRGMTERDLSPDVVTYNTLISK 232
L + A+ M R++SP TLIS
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
C K KA E+ + ++KG + D T L+ LC +L EA+ + +E+L G
Sbjct: 480 LC--KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
+ +Y L++ + + +AF DEM + G P + TY+ +I GL +
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR--------GLKPDNYTYSILICGLFNMN 589
Query: 353 RAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
+ EEA+ G+ PD +Y +I G C+
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 134/314 (42%), Gaps = 18/314 (5%)
Query: 33 NVIIRGFTAVGNLQSE---SKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETT- 88
N ++ G G L K++ G ++ + + S +++ EA +DE
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 89 --------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
TY+ L+ +V+EA+ G+ P++ +++ ++ G C R
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M K++ P+ Y LI +C G A ++ +M G SP+ ATY LI+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 201 RL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
+ R+E+A +F M L P+V Y LI + KL + + K + EM K +
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ--MVKVECLLREMHSKNV 746
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
P+ TY +I ++EA L EM G+ P++ TY + Y +G +AF
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Query: 317 LQDEMTHKGFLPGF 330
DE + + G+
Sbjct: 807 GSDEENYAAIIEGW 820
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 33/280 (11%)
Query: 24 CLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS---------- 73
C+ +R+S N +I G KK+ AF L ++G++ ++ +
Sbjct: 536 CVMDRVSY-NTLISGCCG-------KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 74 GRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
++ EA Q D+ TY+ ++ C ER +E M + ++PN +
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+N +++ C GR+ M K ++P+ TYTSLI +A+ + EM
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 185 DSGFSPSVATYNRLIRRL-RLEDAVGV---FRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
G P+V Y LI +L V V R M +++ P+ +TY +I + ++ +
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA--RDGN 765
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAY 280
+ +A + EM KGI+PD+ TY+ I Q + EA+
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 11/190 (5%)
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
A+ VF + + + P T N L++ + E +K E ++V KG+ PD +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANE--FQKCCE-AFDVVCKGVSPDVYLFTTA 266
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
I C ++ EA LF +M GV+PN T+ +++ + G++ +AF +++M +
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER-- 324
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
G P+ +TY+ ++ GL R +A VL+ M + G P+ + Y +I F
Sbjct: 325 ------GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 387 REPGKAYELK 396
KA E+K
Sbjct: 379 GSLNKAIEIK 388
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 176 ARKVLSEMIDSGFSPSVATYN----RLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A V + + G PS T N L+R + F + + +SPDV + T I+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
FCK +E+A ++ ++M G+ P+ T+ +I L + R EA+ +M+ G+
Sbjct: 269 AFCK--GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
P TY+ L+ + A+ + EMT KGF P+ + YN +I
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGF--------PPNVIVYNNLIDSFIEA 378
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
G +A+ + M GLS + +Y T+I G+C+ + A L E+
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 57 ELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTER 116
L++A G S ++ R + + + + TY +L+ RV+EA + M
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 709
Query: 117 GLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKA 176
GL+PN+ + A++ G G+M M+ K++ P++ TYT +I + G+ +A
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 177 RKVLSEMIDSGFSPSVATYNRLIR-RLRLEDAVGVFRGMTERDLSPDVVTYNTLI 230
++L+EM + G P TY I L+ + F+G E + + + +N LI
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEGWNKLI 824
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 159/331 (48%), Gaps = 16/331 (4%)
Query: 84 VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX 143
V +T T NAL+ C ++DEA I + + RG + +S+N ++ G CGK ++
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 144 XXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI---- 199
M ++ L PD TY+ LI + +A + + +G P V TY+ +I
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 200 RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+ R E+ F M +++ P+ V YN LI +C+ L A E++ +M HKGI P+
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR--SGRLSMALELREDMKHKGISPN 679
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
+ TY LI+ + + R+ EA LF EM G+ PN YT L++ Y GQ K L
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
EM K P+ +TY +I G G EA +L M E G+ PD+++Y
Sbjct: 740 EMHSKNV--------HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 380 ILGFCRIREPGKAYELKVEVDENMISWLGIW 410
I G+ +++ G K +EN + + W
Sbjct: 792 IYGY--LKQGGVLEAFKGSDEENYAAIIEGW 820
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 174/412 (42%), Gaps = 75/412 (18%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSV----------SGRRIREAEQ 82
+++++G T +K++G A+ +LK T+KG N + + +A +
Sbjct: 334 SILVKGLT-------RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 83 VVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVV---- 129
+ D ++TYN L+ YC + + D A +L+ M G N SF +V+
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Query: 130 -------------------------------QGLCGKGRMXXXXXXXXXMNQKDLAPDER 158
GLC G+ K D R
Sbjct: 447 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 506
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----RLRLEDAVGVFRGM 214
T +L+H C+ G +A ++ E++ G +YN LI + +L++A M
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
+R L PD TY+ LI + + +E+A + + G+LPD TY +I C +
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNK--VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
R E + F EM+ V PN Y L+ AY G+ S A L+++M HK G
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK--------GI 676
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
SP+ TY ++I G+ ++ R EEA + M GL P+ Y +I G+ ++
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 141/308 (45%), Gaps = 14/308 (4%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
+ + A+C +V+EA+ + M E G+ PN+++FN V+ GL GR M
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
++ + P TY+ L+ G A VL EM GF P+V YN LI L
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A+ + M + LS TYNTLI +CK + D A + EM+ G + ++
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD--NAERLLKEMLSIGFNVNQGSFTS 440
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+I LC A EML +SP T L++ G+ SKA L + +KG
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
F+ T NA+++GLC G+ +EA + + + G D VSY T+I G C
Sbjct: 501 FVVDTRTS--------NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 386 IREPGKAY 393
++ +A+
Sbjct: 553 KKKLDEAF 560
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 159/393 (40%), Gaps = 67/393 (17%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
P+V + FT N + KV A +L E GV N V T+N
Sbjct: 258 PDVYL--FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVV----------------TFN 299
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
++ R DEA M ERG++P LI+++ +V+GL R+ M +K
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----------- 200
P+ Y +LI F + G KA ++ M+ G S + +TYN LI+
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 201 ----------------------------RLRLEDAVGVFRGMTERDLSPDVVTYNTLISK 232
L + A+ M R++SP TLIS
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
C K KA E+ + ++KG + D T L+ LC +L EA+ + +E+L G
Sbjct: 480 LC--KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
+ +Y L++ + + +AF DEM + G P + TY+ +I GL +
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR--------GLKPDNYTYSILICGLFNMN 589
Query: 353 RAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
+ EEA+ G+ PD +Y +I G C+
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 134/314 (42%), Gaps = 18/314 (5%)
Query: 33 NVIIRGFTAVGNLQSE---SKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETT- 88
N ++ G G L K++ G ++ + + S +++ EA +DE
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 89 --------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
TY+ L+ +V+EA+ G+ P++ +++ ++ G C R
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M K++ P+ Y LI +C G A ++ +M G SP+ ATY LI+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 201 RL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
+ R+E+A +F M L P+V Y LI + KL + + K + EM K +
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ--MVKVECLLREMHSKNV 746
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
P+ TY +I ++EA L EM G+ P++ TY + Y +G +AF
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Query: 317 LQDEMTHKGFLPGF 330
DE + + G+
Sbjct: 807 GSDEENYAAIIEGW 820
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 33/280 (11%)
Query: 24 CLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS---------- 73
C+ +R+S N +I G KK+ AF L ++G++ ++ +
Sbjct: 536 CVMDRVSY-NTLISGCCG-------KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 74 GRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
++ EA Q D+ TY+ ++ C ER +E M + ++PN +
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+N +++ C GR+ M K ++P+ TYTSLI +A+ + EM
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 185 DSGFSPSVATYNRLIRRL-RLEDAVGV---FRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
G P+V Y LI +L V V R M +++ P+ +TY +I + ++ +
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA--RDGN 765
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAY 280
+ +A + EM KGI+PD+ TY+ I Q + EA+
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 11/190 (5%)
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
A+ VF + + + P T N L++ + E +K E ++V KG+ PD +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANE--FQKCCE-AFDVVCKGVSPDVYLFTTA 266
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
I C ++ EA LF +M GV+PN T+ +++ + G++ +AF +++M +
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER-- 324
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
G P+ +TY+ ++ GL R +A VL+ M + G P+ + Y +I F
Sbjct: 325 ------GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 387 REPGKAYELK 396
KA E+K
Sbjct: 379 GSLNKAIEIK 388
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 176 ARKVLSEMIDSGFSPSVATYN----RLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A V + + G PS T N L+R + F + + +SPDV + T I+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
FCK +E+A ++ ++M G+ P+ T+ +I L + R EA+ +M+ G+
Sbjct: 269 AFCK--GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
P TY+ L+ + A+ + EMT KGF P+ + YN +I
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGF--------PPNVIVYNNLIDSFIEA 378
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
G +A+ + M GLS + +Y T+I G+C+ + A L E+
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 57 ELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTER 116
L++A G S ++ R + + + + TY +L+ RV+EA + M
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 709
Query: 117 GLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKA 176
GL+PN+ + A++ G G+M M+ K++ P++ TYT +I + G+ +A
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 177 RKVLSEMIDSGFSPSVATYNRLIR-RLRLEDAVGVFRGMTERDLSPDVVTYNTLI 230
++L+EM + G P TY I L+ + F+G E + + + +N LI
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEGWNKLI 824
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 23/323 (7%)
Query: 76 RIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
RI +A + D+ TY L+ C + ++ A+ + M G +PN++++N
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
A+V GLC GR M ++ + P+ T+T+LI F G +A+++ + MI
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 187 GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
P V TY LI L L++A +F M P+ V Y TLI FCK K +E
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR--VE 345
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
++ EM KG++ + TY LI+ CL R A ++F +M P+ TY L+
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
+ G+ KA + + M + + VTY II G+C LG+ E+A +
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKR--------EMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 363 GMPEIGLSPDAVSYCTVILGFCR 385
+ G+ P+ ++Y T+I GFCR
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCR 480
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 152/327 (46%), Gaps = 19/327 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T N ++ C + A L M + G +P+L++F +++ G C R+ +
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
P+ TYT+LI C H A ++ ++M +G P+V TYN L+ L R
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
DA + R M +R + P+V+T+ LI F K+ + L +A E+ M+ + PD TY
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK--LMEAKELYNVMIQMSVYPDVFTYG 297
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI LC+ L EA +F M R G PN YT L++ + + + EM+ K
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G + + +TY +I G CL+GR + A V M PD +Y ++ G C
Sbjct: 358 GVV--------ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409
Query: 385 RIREPGKA-----YELKVEVDENMISW 406
+ KA Y K E+D N++++
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTY 436
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 154/349 (44%), Gaps = 32/349 (9%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
PNV+ +T + +++ + A EL G N V TYN
Sbjct: 186 PNVVT--YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV----------------TYN 227
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
ALV C R +A +LR M +R ++PN+I+F A++ G++ M Q
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDA 207
+ PD TY SLI+ C G +AR++ M +G P+ Y LI R+ED
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ +F M+++ + + +TY LI +C + PD+ + E+ +M + PD TY L+
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ--EVFNQMSSRRAPPDIRTYNVLL 405
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
LC ++ +A +F M + + N TYT ++ G+ AF L F
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL--------FC 457
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
F G P+ +TY +I G C G EA + + M E G P+ Y
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 136/304 (44%), Gaps = 14/304 (4%)
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYT 161
+ ++A+ + M P++I F ++ + R M + P T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 162 SLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTER 217
++H C P +A L +M+ GF P + T+ L+ R+EDA+ +F +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
P+VVTY TLI CK + L A E+ +M G P+ TY L+ LC R
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRH--LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
+A L R+M++ + PN T+T L++A+ G+ +A L + M P T
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT----- 295
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKV 397
Y ++I GLC+ G +EA + M G P+ V Y T+I GFC+ + ++
Sbjct: 296 ---YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352
Query: 398 EVDE 401
E+ +
Sbjct: 353 EMSQ 356
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 20/302 (6%)
Query: 101 ERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTY 160
R D + + M G+ P L + N V+ +C + M + PD T+
Sbjct: 97 NRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTF 156
Query: 161 TSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTE 216
TSL++ +C A + +++ GF P+V TY LIR L L AV +F M
Sbjct: 157 TSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT 216
Query: 217 RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRL 276
P+VVTYN L++ C++ A + +M+ + I P+ T+ LI +L
Sbjct: 217 NGSRPNVVTYNALVTGLCEIGR--WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 277 SEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA---FHLQDEMTHKGFLPGFVTG 333
EA +L+ M++ V P+ TY L+N + G +A F+L + G
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER-----------NG 323
Query: 334 FSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAY 393
P+ V Y +I+G C R E+ + + M + G+ + ++Y +I G+C + P A
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 394 EL 395
E+
Sbjct: 384 EV 385
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 28/221 (12%)
Query: 236 LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
L A ++ MVH LP + L+ + R LF +M G+ P
Sbjct: 59 LHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLL 118
Query: 296 ETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAE 355
T +M+ + Q +A +M GF P VT+ +++ G C R E
Sbjct: 119 CTCNIVMHCVCLSSQPCRASCFLGKMMK--------LGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE-----NMISW---- 406
+A+ + + +G P+ V+Y T+I C+ R A EL ++ N++++
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 407 -----LGIWG----LFEDTRKSLMQGLSNEDTFSSLMNDYL 438
+G WG L D K ++ N TF++L++ ++
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIE--PNVITFTALIDAFV 269
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 160/353 (45%), Gaps = 45/353 (12%)
Query: 80 AEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
A ++ + Y +L+ YC ++ V + +L M +R + + ++ VV+G+C G +
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI 199
M P+ YT+LI F G A +VL EM + G +P + YN LI
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 200 RRL----RLEDAVGVFRGMTERDLSPDVVTYNTLIS------------KFCK-------- 235
L R+++A M E L P+ TY IS K+ K
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 236 -------------LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDL 282
K+ + +A MV +GIL DA TY L+ L ++ +A ++
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 283 FREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYN 342
FREM G++P+ +Y L+N + G KA + DEM + G +P+ + YN
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE--------GLTPNVIIYN 666
Query: 343 AIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
++ G C G E+A +L M GL P+AV+YCT+I G+C+ + +A+ L
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 164/374 (43%), Gaps = 40/374 (10%)
Query: 26 RNRLSPP---NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQ 82
RN + P +++G + G+L GA+ ++K G N V
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLD-------GAYNIVKEMIASGCRPNVV---------- 453
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
Y L+ + + R +AM +L+ M E+G+ P++ +N+++ GL RM
Sbjct: 454 ------IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPS----VATYNRL 198
M + L P+ TY + I + + A K + EM + G P+ N
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 199 IRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
++ ++ +A +R M ++ + D TY L++ K ++ A E+ EM KGI P
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL--FKNDKVDDAEEIFREMRGKGIAP 625
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
D +Y LI + +A +F EM+ G++PN Y L+ + G+ KA L
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
DEM+ V G P+ VTY II G C G EA + M GL PD+ Y T
Sbjct: 686 DEMS--------VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 379 VILGFCRIREPGKA 392
++ G CR+ + +A
Sbjct: 738 LVDGCCRLNDVERA 751
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 23/334 (6%)
Query: 72 VSGRRIREAEQVVDETTTYNALVLAY---CC------DERVDEAMGILRCMTERGLKPNL 122
+ GR A+ +V E ++ + Y CC + +++A + M GL P
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382
Query: 123 ISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSE 182
++ ++++G C + + M ++++ TY +++ C G A ++ E
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442
Query: 183 MIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE 238
MI SG P+V Y LI+ R DA+ V + M E+ ++PD+ YN+LI K K
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 239 PDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETY 298
D ++F + EMV G+ P+A TY I + A +EM GV PN
Sbjct: 503 MDEARSFLV--EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 299 TGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEAL 358
TGL+N Y +G+ +A M +G L TY ++ GL + ++A
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILG--------DAKTYTVLMNGLFKNDKVDDAE 612
Query: 359 GVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKA 392
+ R M G++PD SY +I GF ++ KA
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 35/336 (10%)
Query: 82 QVVDETTTYNALVLAYC---------------------CDERVDEAMGILRCMTERGLKP 120
VV + TY+ L++A+C VD A+ + M +GL P
Sbjct: 216 NVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVP 275
Query: 121 NLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVL 180
+++ ++ GLC R+ M+ ++ D TY+ LI + A+ ++
Sbjct: 276 LKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLV 335
Query: 181 SEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL 236
EM+ G + Y+ I + +E A +F GM L P Y +LI +C+
Sbjct: 336 HEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR- 394
Query: 237 KEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNE 296
E ++ + +E+ EM + I+ TY +++ +C L AY++ +EM+ G PN
Sbjct: 395 -EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 297 TYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEE 356
YT L+ + +F A + EM +G +P YN++I GL R +E
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGI--------APDIFCYNSLIIGLSKAKRMDE 505
Query: 357 ALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKA 392
A L M E GL P+A +Y I G+ E A
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 156/359 (43%), Gaps = 37/359 (10%)
Query: 34 VIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNAL 93
V+I GF+ +GN+Q S + E+G+ N + YN L
Sbjct: 632 VLINGFSKLGNMQKAS-------SIFDEMVEEGLTPNVI----------------IYNML 668
Query: 94 VLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDL 153
+ +C +++A +L M+ +GL PN +++ ++ G C G + M K L
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 154 APDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR--------RLRLE 205
PD YT+L+ C +A + G + S A +N LI L+ E
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTE 787
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+ G +R P+ VTYN +I CK E +LE A E+ +M + ++P TY
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCK--EGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
L+ R +E + +F E + G+ P++ Y+ ++NA+ EG +KA L D+M K
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
+ G S T A++ G +G E A V+ M + PD+ + +I C
Sbjct: 906 AVD---DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 166/394 (42%), Gaps = 61/394 (15%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
L+ +KG + S R + ++ + TY L+ +++VD+A I R M +G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
+ P++ S+ ++ G G M M ++ L P+ Y L+ FC G KA+
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 178 KVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
++L EM G P+ TY +I + L +A +F M + L PD Y TL+
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 234 CKLKEPDLEKAF------------------------------EMKAEMVHKGI------- 256
C+L D+E+A E+K E++++ +
Sbjct: 743 CRLN--DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 257 -LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
P+ TY +I LC + L A +LF +M + P TYT L+N Y G+ ++ F
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD--- 372
+ DE G P H+ Y+ II G +AL ++ M D
Sbjct: 861 PVFDE--------AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912
Query: 373 -AVSYCTVIL-GFCRIREPGKAYELKVEVDENMI 404
++S C +L GF ++ E E+ +V ENM+
Sbjct: 913 LSISTCRALLSGFAKVGE----MEVAEKVMENMV 942
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 29/229 (12%)
Query: 196 NRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEK------------ 243
+ L+R RL+ V++GM ER++ DV TY+ LI C+ L K
Sbjct: 194 DALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRT 253
Query: 244 -------AFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNE 296
A ++K M+ KG++P TY+ LI LC +RL +A L EM GVS +N
Sbjct: 254 ATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNH 313
Query: 297 TYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT-GFSPSHVTYNAIIYGLCLLGRAE 355
TY+ L++ ++G+ + A KG + V+ G + Y+ I + G E
Sbjct: 314 TYSLLIDGL-LKGRNADA--------AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
+A + GM GL P A +Y ++I G+CR + + YEL VE+ + I
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 172/447 (38%), Gaps = 56/447 (12%)
Query: 3 TLHKSMLLTRPNPMKLLRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVG--------- 53
TL S L NP + LS R+ P+ ++ F V + + +K+
Sbjct: 50 TLVSSNLSIEINPE--VVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDL 107
Query: 54 ---GAFELLKAGTEKGVESN----SVSGRRIREAEQVV---DETTTYNALVLAYCCDERV 103
G+FE + E+ +E N V +R +++ V D+ + L Y +
Sbjct: 108 CNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYI 167
Query: 104 DEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSL 163
+EA+ + L P L ++ L R+ M ++++ D +TY L
Sbjct: 168 EEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHML 227
Query: 164 IHLFCDKGHPGKARKVL---------------------SEMIDSGFSPSVATYNRLIRRL 202
I C G+ + VL MI G P TY+ LI L
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGL 287
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
RLEDA + M +S D TY+ LI K + D K + EMV GI
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG--LVHEMVSHGINI 345
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
Y+ I + + + +A LF M+ G+ P + Y L+ Y E + + L
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
EM + + SP TY ++ G+C G + A +++ M G P+ V Y T
Sbjct: 406 VEMKKRNIV------ISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 379 VILGFCRIREPGKAYELKVEVDENMIS 405
+I F + G A + E+ E I+
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 11/169 (6%)
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
+R KPN +++N ++ LC +G + M +L P TYTSL++ + G
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857
Query: 175 KARKVLSEMIDSGFSPSVATYNRLIRRLRLE----DAVGVFRGMTERDLSPD-----VVT 225
+ V E I +G P Y+ +I E A+ + M ++ D + T
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIST 917
Query: 226 YNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
L+S F K+ E +E A ++ MV +PD+ T LI C+
Sbjct: 918 CRALLSGFAKVGE--MEVAEKVMENMVRLQYIPDSATVIELINESCISS 964
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 145/305 (47%), Gaps = 14/305 (4%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
+++ + LV +C + A + M + G+ PNL +N ++ G C G M
Sbjct: 299 ELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEA 358
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI-- 199
M +L+PD TYT LI+ C + +A ++ +M + PS ATYN LI
Sbjct: 359 VGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHG 418
Query: 200 --RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
+ +E A+ + MT + P+++T++TLI +C ++ D++ A + EM KGI+
Sbjct: 419 YCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVR--DIKAAMGLYFEMTIKGIV 476
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
PD TY LI + + EA L+ +ML G+ PN+ T+ L++ + EG+ S A
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
E + +HV + +I GLC G A M G++PD SY
Sbjct: 537 YQENNQQ--------RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYV 588
Query: 378 TVILG 382
+++ G
Sbjct: 589 SMLKG 593
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 156/341 (45%), Gaps = 23/341 (6%)
Query: 79 EAEQVVDETTT---------YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVV 129
+ E+++DE T+ Y +L C D +++EA + M + G+ PNL +++A++
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 130 QGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFS 189
G C G + + +L P+ + +L+ FC AR + M+ G
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 190 PSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF 245
P++ YN LI + + +AVG+ M +LSPDV TY LI+ C E + +A
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLC--IEDQVAEAN 394
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY 305
+ +M ++ I P + TY LI C + + +A DL EM GV PN T++ L++ Y
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454
Query: 306 RIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMP 365
A L EMT KG +P VTY A+I +EAL + M
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVPDV--------VTYTALIDAHFKEANMKEALRLYSDML 506
Query: 366 EIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISW 406
E G+ P+ ++ ++ GF + A + E ++ W
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW 547
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 178/411 (43%), Gaps = 43/411 (10%)
Query: 26 RNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEK---GVESNSVSGRRIREAEQ 82
R+R+S N + + F+AV ++ + + K A L+K+ E+ E +++S R E
Sbjct: 66 RSRVSKSNDL-QSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALED 124
Query: 83 VVD---ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
+ ++ L++ + +EA+ + R E P+ + +++ GL + R
Sbjct: 125 IQSPKFSIGVFSLLIMEFLEMGLFEEALWVSR---EMKCSPDSKACLSILNGLVRRRRFD 181
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN--- 196
M + L PD Y L +G K K+L EM G P+V Y
Sbjct: 182 SVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYI 241
Query: 197 -RLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
L R ++E+A +F M + + P++ TY+ +I +C K ++ +A+ + E++
Sbjct: 242 LDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC--KTGNVRQAYGLYKEILVAE 299
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
+LP+ + L+ C + L A LF M+++GV PN Y L++ + G +A
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAV 359
Query: 316 HLQDEMTHKGFLPGFVT---------------------------GFSPSHVTYNAIIYGL 348
L EM P T PS TYN++I+G
Sbjct: 360 GLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGY 419
Query: 349 CLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
C E+AL + M G+ P+ +++ T+I G+C +R+ A L E+
Sbjct: 420 CKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM 470
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 119/243 (48%), Gaps = 6/243 (2%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
E++ + TYN+L+ YC + +++A+ + MT G++PN+I+F+ ++ G C +
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI- 199
M K + PD TYT+LI + + +A ++ S+M+++G P+ T+ L+
Sbjct: 463 AMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Query: 200 ---RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
+ RL A+ ++ ++ + V + LI C + + +A ++M GI
Sbjct: 523 GFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC--QNGYILRASRFFSDMRSCGI 580
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
PD +Y +++ ++R+++ L +M++ G+ PN L Y+ G A
Sbjct: 581 TPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACF 640
Query: 317 LQD 319
L +
Sbjct: 641 LTN 643
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 6/259 (2%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E+ + + TY L+ C +++V EA + + M + P+ ++N+++ G C + M
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M + P+ T+++LI +C+ A + EM G P V TY L
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I + +++A+ ++ M E + P+ T+ L+ F KE L A + E +
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF--WKEGRLSVAIDFYQENNQQ 543
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
+ + LI LC + A F +M G++P+ +Y ++ + E + +
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDT 603
Query: 315 FHLQDEMTHKGFLPGFVTG 333
LQ +M G LP +
Sbjct: 604 MMLQCDMIKTGILPNLLVN 622
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 180/419 (42%), Gaps = 76/419 (18%)
Query: 23 TCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR------- 75
TC N +S +++I G VG L+ AF L EKG + ++ +
Sbjct: 261 TCAPNSVSY-SILIHGLCEVGRLEE-------AFGLKDQMGEKGCQPSTRTYTVLIKALC 312
Query: 76 ---RIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLI 123
I +A + DE TY L+ C D +++EA G+ R M + + P++I
Sbjct: 313 DRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVI 372
Query: 124 SFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM 183
++NA++ G C GR+ M ++ P+ RT+ L+ C G P KA +L M
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 184 IDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP 239
+D+G SP + +YN LI R + A + M D+ PD +T+ +I+ FCK +
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 240 DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW---------- 289
D+ AF M+ KGI D T LI +C + +A + +++
Sbjct: 493 DVASAF--LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550
Query: 290 -------------------------GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
G+ P+ TYT L++ G + +F + + M
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS 610
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
G LP Y II GLC GR EEA +L M + G+SP+ V+Y ++ G+
Sbjct: 611 GCLPNV--------YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 135/290 (46%), Gaps = 15/290 (5%)
Query: 111 RCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDK 170
R M G +I + +V LC G + + D TSL+ FC
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRG 243
Query: 171 GHPGKARKVLSEMI-DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVT 225
+ A KV M + +P+ +Y+ LI L RLE+A G+ M E+ P T
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 226 YNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFRE 285
Y LI C ++KAF + EM+ +G P+ TY LI LC ++ EA + R+
Sbjct: 304 YTVLIKALCD--RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 286 MLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAII 345
M++ + P+ TY L+N Y +G+ AF L M + P+ T+N ++
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC--------KPNVRTFNELM 413
Query: 346 YGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
GLC +G+ +A+ +L+ M + GLSPD VSY +I G CR AY+L
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 126/251 (50%), Gaps = 15/251 (5%)
Query: 160 YTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMT 215
Y ++++ C G+ A +S+++ GF L+ R L L DA+ VF M+
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 216 -ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
E +P+ V+Y+ LI C++ LE+AF +K +M KG P TY LI+ LC +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGR--LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
+ +A++LF EM+ G PN TYT L++ +G+ +A + +M P
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP------ 369
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
S +TYNA+I G C GR A +L M + P+ ++ ++ G CR+ +P KA
Sbjct: 370 --SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 395 LKVEVDENMIS 405
L + +N +S
Sbjct: 428 LLKRMLDNGLS 438
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 139/334 (41%), Gaps = 59/334 (17%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
P+VI + A+ N + +V AFELL ++ + N T+N
Sbjct: 369 PSVIT--YNALINGYCKDGRVVPAFELLTVMEKRACKPN----------------VRTFN 410
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
L+ C + +A+ +L+ M + GL P+++S+N ++ GLC +G M MN
Sbjct: 411 ELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCF 470
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI------------ 199
D+ PD T+T++I+ FC +G A L M+ G S T LI
Sbjct: 471 DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
Query: 200 ---------------------------RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISK 232
+ ++++ + + + + L P VVTY TL+
Sbjct: 531 LFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDG 590
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
++ D+ +F + M G LP+ Y +I LC R+ EA L M GVS
Sbjct: 591 L--IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
PN+ TYT ++ Y G+ +A M +G+
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 113/278 (40%), Gaps = 30/278 (10%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+V TY LV + + IL M G PN+ + ++ GLC GR+
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M ++P+ TYT ++ + + G +A + + M++ G+ + Y+ L++
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Query: 203 RLEDAVGVFRGM--TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH-KGILPD 259
L +G+ +E D+ L+E D E E+ + + G +
Sbjct: 697 VLSQ-----KGIDNSEESTVSDIA-----------LRETDPECINELISVVEQLGGCISG 740
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
+ L+ LC + R E+ DL + +L GV + +M +Y + + +K L
Sbjct: 741 LCIF--LVTRLCKEGRTDESNDLVQNVLERGVFL-EKAMDIIMESYCSKKKHTKCMELIT 797
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEA 357
+ GF+P F ++ +I GL G AE A
Sbjct: 798 LVLKSGFVPSF--------KSFCLVIQGLKKEGDAERA 827
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 148/304 (48%), Gaps = 17/304 (5%)
Query: 96 AYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAP 155
+C + +EA+ ++ L+PN+ +++ + +C G M + + L P
Sbjct: 350 GFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 156 DERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVF 211
D YT++I +C+ G KA + ++ SG PS+ T LI R + DA VF
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 212 RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLC 271
R M L DVVTYN L+ + K + L K FE+ EM GI PD TY LI ++
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQ--LNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 272 LQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFV 331
++ + EA ++ E++R G P+ +T ++ + G F +AF L M
Sbjct: 525 VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD-------- 576
Query: 332 TGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGK 391
P VT +A+++G C R E+A+ + + + GL PD V Y T+I G+C + + K
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 392 AYEL 395
A EL
Sbjct: 637 ACEL 640
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 33/182 (18%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TYN L+ + +DEA I+ + RG P+ ++F V+ G +G
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE 205
M + PD T ++L+H +C KA + ++++D+G P V
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV------------- 618
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
V YNTLI +C + D+EKA E+ MV +G+LP+ T+
Sbjct: 619 ------------------VLYNTLIHGYCSV--GDIEKACELIGLMVQRGMLPNESTHHA 658
Query: 266 LI 267
L+
Sbjct: 659 LV 660
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
C ++E + A ++ ++ GI P L++ + L A + ML G
Sbjct: 210 CCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHL 269
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
N + + Y +G F K + L M H G P V + I LC G
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVA--------FTVFIDKLCKAGF 321
Query: 354 AEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+EA VL + G+S D+VS +VI GFC++ +P +A +L
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 148/304 (48%), Gaps = 17/304 (5%)
Query: 96 AYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAP 155
+C + +EA+ ++ L+PN+ +++ + +C G M + + L P
Sbjct: 350 GFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 156 DERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVF 211
D YT++I +C+ G KA + ++ SG PS+ T LI R + DA VF
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 212 RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLC 271
R M L DVVTYN L+ + K + L K FE+ EM GI PD TY LI ++
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQ--LNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 272 LQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFV 331
++ + EA ++ E++R G P+ +T ++ + G F +AF L M
Sbjct: 525 VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD-------- 576
Query: 332 TGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGK 391
P VT +A+++G C R E+A+ + + + GL PD V Y T+I G+C + + K
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 392 AYEL 395
A EL
Sbjct: 637 ACEL 640
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 33/182 (18%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TYN L+ + +DEA I+ + RG P+ ++F V+ G +G
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE 205
M + PD T ++L+H +C KA + ++++D+G P V
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV------------- 618
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
V YNTLI +C + D+EKA E+ MV +G+LP+ T+
Sbjct: 619 ------------------VLYNTLIHGYCSV--GDIEKACELIGLMVQRGMLPNESTHHA 658
Query: 266 LI 267
L+
Sbjct: 659 LV 660
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
C ++E + A ++ ++ GI P L++ + L A + ML G
Sbjct: 210 CCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHL 269
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
N + + Y +G F K + L M H G P V + I LC G
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVA--------FTVFIDKLCKAGF 321
Query: 354 AEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+EA VL + G+S D+VS +VI GFC++ +P +A +L
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 167/401 (41%), Gaps = 68/401 (16%)
Query: 66 GVESNSVSGRRIREAEQVVDETTTYNA-----LVLAYCCDERVDEAMGILRCMTERGLKP 120
G SN + + E VD NA L+ A C + ++++A IL +GL P
Sbjct: 328 GYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387
Query: 121 NLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVL 180
N + +N ++ G C KG + M ++ + PD Y LI FC+ G A K +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 181 SEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK- 235
++M G SPSV TYN LI R+ + + + M + P+VV+Y TLI+ CK
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 236 --------------------------------LKEPDLEKAFEMKAEMVHKGILPDADTY 263
+ +E AF EM+ KGI + TY
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
LI L + +LSEA DL E+ R G+ P+ TY L++ Y G + L +EM
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 324 KGFLPGFVT-----------------------GFSPSHVTYNAIIYGLCLLGRAEEALGV 360
G P T P + YN +++ + G E+A +
Sbjct: 628 SGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNL 687
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
+ M E + D +Y ++ILG ++ GK E++ +DE
Sbjct: 688 QKQMIEKSIGLDKTTYNSLILGQLKV---GKLCEVRSLIDE 725
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 143/304 (47%), Gaps = 14/304 (4%)
Query: 84 VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX 143
V + T++ L Y +E+ + A+G+ + G+K N + + ++ LC +G++
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 144 XXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL- 202
K L P+E Y ++I +C KG AR + M G P YN LIRR
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 203 ---RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+E+A M + +SP V TYN LI + + E D K F++ EM G +P+
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD--KCFDILKEMEDNGTMPN 493
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
+Y LI LC +L EA + R+M GVSP Y L++ +G+ AF
Sbjct: 494 VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSK 553
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
EM K G + VTYN +I GL + G+ EA +L + GL PD +Y ++
Sbjct: 554 EMLKK--------GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 380 ILGF 383
I G+
Sbjct: 606 ISGY 609
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 166/373 (44%), Gaps = 41/373 (10%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNA 92
N +IR F +G +++ K+V ++ G VE TYN
Sbjct: 428 NCLIRRFCELGEMENAEKEVN---KMKLKGVSPSVE--------------------TYNI 464
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ Y D+ IL+ M + G PN++S+ ++ LC ++ M +
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 524
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAV 208
++P R Y LI C KG A + EM+ G ++ TYN LI L +L +A
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIR 268
+ ++ + L PDV TYN+LIS + ++++ + EM GI P TY LI
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGYGF--AGNVQRCIALYEEMKRSGIKPTLKTYHLLI- 641
Query: 269 TLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
+LC ++ + LF EM + P+ Y G+++ Y + G KAF+LQ +M K
Sbjct: 642 SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI-- 696
Query: 329 GFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIRE 388
TYN++I G +G+ E ++ M + P+A +Y ++ G C +++
Sbjct: 697 ------GLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKD 750
Query: 389 PGKAYELKVEVDE 401
AY E+ E
Sbjct: 751 YMSAYVWYREMQE 763
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 151/377 (40%), Gaps = 70/377 (18%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YN L+ C +R+++A + M R L P+LI++N ++ G C G M
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLE 205
+ P T+ +L+ G A VL EM D GF P T++ L + E
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 206 DAVGVFRGMTE-----------------------------------RDLSPDVVTYNTLI 230
A+GV+ + + L P+ V YNT+I
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHK-GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW 289
+C ++ DL A MK E + K G+ PD Y LIR C + A +M
Sbjct: 397 DGYC--RKGDLVGA-RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 290 GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT----------------- 332
GVSP+ ETY L+ Y + +F K F + EM G +P V+
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 333 ----------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
G SP YN +I G C G+ E+A + M + G+ + V+Y T+I G
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 383 FCRIREPGKAYELKVEV 399
+ +A +L +E+
Sbjct: 574 LSMTGKLSEAEDLLLEI 590
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 137/304 (45%), Gaps = 14/304 (4%)
Query: 103 VDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTS 162
V + + + M + P++ +N ++ GLC RM M + L P TY +
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 163 LIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERD 218
LI +C G+P K+ KV M PS+ T+N L++ L +EDA V + M +
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 219 LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE 278
PD T++ L + ++ E A + V G+ +A T L+ LC + ++ +
Sbjct: 315 FVPDAFTFSILFDGYSSNEKA--EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSH 338
A ++ + G+ PN Y +++ Y +G A ++ E K G P H
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAMEK-------QGMKPDH 424
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVE 398
+ YN +I C LG E A + M G+SP +Y +I G+ R E K +++ E
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 399 VDEN 402
+++N
Sbjct: 485 MEDN 488
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 129/309 (41%), Gaps = 60/309 (19%)
Query: 56 FELLKAGTEKGVESNSVS----------GRRIREAE---------QVVDETTTYNALVLA 96
F++LK + G N VS G ++ EA+ V + YN L+
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 97 YCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPD 156
C ++++A + M ++G++ NL+++N ++ GL G++ +++K L PD
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 157 ERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTE 216
TY SLI + G+ + + EM SG P++ TY+ LI E R E
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGE 658
Query: 217 RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI-------------------- 256
L PD++ YN ++ C D+EKAF ++ +M+ K I
Sbjct: 659 MSLKPDLLVYNGVLH--CYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKL 716
Query: 257 ---------------LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG----VSPNNET 297
P+ADTY +++ C + AY +REM G V NE
Sbjct: 717 CEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNEL 776
Query: 298 YTGLMNAYR 306
+GL +R
Sbjct: 777 VSGLKEEWR 785
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 10/188 (5%)
Query: 196 NRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
+ L++ + + VF + E D P Y I KL D+ K E+ M H
Sbjct: 152 DHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKL--SDVGKGLELFNRMKHDR 209
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
I P Y LI LC +R+++A LF EML + P+ TY L++ Y G K+F
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVS 375
+++ M PS +T+N ++ GL G E+A VL+ M ++G PDA +
Sbjct: 270 KVRERMK--------ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321
Query: 376 YCTVILGF 383
+ + G+
Sbjct: 322 FSILFDGY 329
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 159/339 (46%), Gaps = 33/339 (9%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
+ Y+ L+ Y + + +++ I R M G P++ + NA++ + G
Sbjct: 164 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 223
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLR 203
M ++ + PD T+ LI++ C +G K+ ++ +M SG++P++ TYN ++ ++ R
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
+ A+ + M + + DV TYN LI C + + K + + +M + I P+ TY
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLC--RSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
LI + ++ A L EML +G+SPN+ T+ L++ + EG F +A + M
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 324 KGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCLLGRAEE 356
KG P V+ G +TY +I GLC G +E
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 357 ALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
A+ +L M + G+ PD V+Y +I GFC++ A E+
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 152/312 (48%), Gaps = 14/312 (4%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
TYN ++ YC R A+ +L M +G+ ++ ++N ++ LC R+
Sbjct: 269 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL----IRRLR 203
M ++ + P+E TY +LI+ F ++G A ++L+EM+ G SP+ T+N L I
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
++A+ +F M + L+P V+Y L+ CK E DL + F M+ M G+ TY
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR--MKRNGVCVGRITY 446
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
+I LC L EA L EM + G+ P+ TY+ L+N + G+F A + +
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI-- 504
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
+ G SP+ + Y+ +IY C +G +EA+ + M G + D ++ ++
Sbjct: 505 ------YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 558
Query: 384 CRIREPGKAYEL 395
C+ + +A E
Sbjct: 559 CKAGKVAEAEEF 570
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 145/320 (45%), Gaps = 17/320 (5%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
++ + T+N L+ C + +++ +++ M + G P ++++N V+ C KGR
Sbjct: 228 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 287
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M K + D TY LIH C K +L +M P+ TYN LI
Sbjct: 288 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 347
Query: 202 LRLEDAVGV----FRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
E V + M LSP+ VT+N LI + E + ++A +M M KG+
Sbjct: 348 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG--HISEGNFKEALKMFYMMEAKGLT 405
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
P +Y L+ LC A + M R GV TYTG+++ G +A L
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
+EM+ G P VTY+A+I G C +GR + A ++ + +GLSP+ + Y
Sbjct: 466 LNEMSKD--------GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 378 TVILGFCR---IREPGKAYE 394
T+I CR ++E + YE
Sbjct: 518 TLIYNCCRMGCLKEAIRIYE 537
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 140/312 (44%), Gaps = 16/312 (5%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
EA+ + +Y L+ C + D A G M G+ I++ ++ GLC G +
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M++ + PD TY++LI+ FC G A++++ + G SP+ Y+ L
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I R L++A+ ++ M + D T+N L++ CK + + +A E M
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK--VAEAEEFMRCMTSD 577
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
GILP+ +++ LI +A+ +F EM + G P TY L+ K
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG------LCKG 631
Query: 315 FHLQDEMTHKGFLPGF-VTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
HL++ + FL + V YN ++ +C G +A+ + M + + PD+
Sbjct: 632 GHLREA---EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688
Query: 374 VSYCTVILGFCR 385
+Y ++I G CR
Sbjct: 689 YTYTSLISGLCR 700
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 162/354 (45%), Gaps = 32/354 (9%)
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGH 172
M G P++++ NA++ G G++ M ++ P+ TY L+H + +
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNT 228
+ + +I +G P T + L+ + LE + + + R + D T+N
Sbjct: 810 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 869
Query: 229 LISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
LISK C ++ AF++ M GI D DT + ++ L R E+ + EM +
Sbjct: 870 LISKCCA--NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 927
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM-THKGFLPGFVTGFSPSHVTYNAIIYG 347
G+SP + Y GL+N G AF +++EM HK P +V +A++
Sbjct: 928 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK---------ICPPNVAESAMVRA 978
Query: 348 LCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE-----N 402
L G+A+EA +LR M ++ L P S+ T++ C+ +A EL+V + +
Sbjct: 979 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 1038
Query: 403 MISW-LGIWGLFEDTRKSL-------MQG---LSNEDTFSSLMNDYLAQDESVS 445
++S+ + I GL +L M+G L+N T+ +L+ LA++ + S
Sbjct: 1039 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFS 1092
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 16/316 (5%)
Query: 76 RIREA---EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
RI EA E + T+N LV + C +V EA +RCMT G+ PN +SF+ ++ G
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
G M + P TY SL+ C GH +A K L + +
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 653
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
YN L+ + L AV +F M +R + PD TY +LIS C+ + + F +
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
AE +LP+ Y + + + +M G +P+ T +++ Y
Sbjct: 714 AE-ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 772
Query: 309 GQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIG 368
G+ K L EM ++ P+ TYN +++G + + R + G
Sbjct: 773 GKIEKTNDLLPEMGNQ--------NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 824
Query: 369 LSPDAVSYCTVILGFC 384
+ PD ++ +++LG C
Sbjct: 825 ILPDKLTCHSLVLGIC 840
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 120/301 (39%), Gaps = 41/301 (13%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
++ + T ++LVL C ++ + IL+ RG++ + +FN ++ C G +
Sbjct: 825 ILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAF 884
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M ++ D+ T +++ + ++R VL EM G SP Y
Sbjct: 885 DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY------- 937
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
+G+ G+ C++ D++ AF +K EM+ I P
Sbjct: 938 -----IGLINGL-------------------CRV--GDIKTAFVVKEEMIAHKICPPNVA 971
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
++R L + EA L R ML+ + P ++T LM+ G +A L+ M+
Sbjct: 972 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 1031
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
+ G V+YN +I GLC G A + M G +A +Y +I G
Sbjct: 1032 N--------CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
Query: 383 F 383
Sbjct: 1084 L 1084
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
T R + + Y+ LI + L+E ++ + E+ M G P T ++ ++
Sbjct: 155 TYRLCNSNPSVYDILIRVY--LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG 212
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
+ +EML+ + P+ T+ L+N EG F K+ +L +M +G+
Sbjct: 213 EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK--------SGY 264
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
+P+ VTYN +++ C GR + A+ +L M G+ D +Y +I CR K Y
Sbjct: 265 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 324
Query: 395 LKVEVDENMISWLGIWGLFEDTRKSLMQGLSNEDTF---SSLMNDYLA 439
L ++ + MI E T +L+ G SNE S L+N+ L+
Sbjct: 325 LLRDMRKRMIHP------NEVTYNTLINGFSNEGKVLIASQLLNEMLS 366
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 132/308 (42%), Gaps = 39/308 (12%)
Query: 4 LHKSMLLTRPNPMKL----LRLSTCLRNRLSPPNVIIRGFTAVG------------NLQS 47
L++S++L P KL L L C N L I++ F G +
Sbjct: 816 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 875
Query: 48 ESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAM 107
+ ++ AF+L+K T G+ +D+ T +A+V + R E+
Sbjct: 876 ANGEINWAFDLVKVMTSLGIS---------------LDKDTC-DAMVSVLNRNHRFQESR 919
Query: 108 GILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLF 167
+L M+++G+ P + ++ GLC G + M + P ++++
Sbjct: 920 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 979
Query: 168 CDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDV 223
G +A +L M+ P++A++ L+ + + +A+ + M+ L D+
Sbjct: 980 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 1039
Query: 224 VTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYD-L 282
V+YN LI+ C + D+ AFE+ EM G L +A TY+ LIR L ++ D +
Sbjct: 1040 VSYNVLITGLCA--KGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1097
Query: 283 FREMLRWG 290
+++L G
Sbjct: 1098 LKDLLARG 1105
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 151/329 (45%), Gaps = 34/329 (10%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TYNAL+ +C ++ + R M GLKPN++S++ +V C +G M
Sbjct: 331 DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 390
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M + L P+E TYTSLI C G+ A ++ +EM+ G +V TY LI L
Sbjct: 391 VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA 450
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
R+++A +F M + P++ +YN LI F K K ++++A E+ E+ +GI PD
Sbjct: 451 ERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK--NMDRALELLNELKGRGIKPDLL 508
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
Y I LC +++ A + EM G+ N+ YT LM+AY G ++ HL DEM
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 322 THKGFLPGFVT----------------------------GFSPSHVTYNAIIYGLCLLGR 353
VT G + + A+I GLC +
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 354 AEEALGVLRGMPEIGLSPDAVSYCTVILG 382
E A + M + GL PD +Y +++ G
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 149/317 (47%), Gaps = 14/317 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN ++ C + V+ A G+ M RGL P+ +++N+++ G GR+ M
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
PD TY +LI+ FC G + EM +G P+V +Y+ L+ +
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ A+ + M L P+ TY +LI CK+ +L AF + EM+ G+ + TY
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG--NLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI LC +R+ EA +LF +M GV PN +Y L++ + +A L +E+ +
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G P + Y I+GLC L + E A V+ M E G+ +++ Y T++ +
Sbjct: 502 --------GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 385 RIREPGKAYELKVEVDE 401
+ P + L E+ E
Sbjct: 554 KSGNPTEGLHLLDEMKE 570
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 147/324 (45%), Gaps = 14/324 (4%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
+V +T + N L+ + + D+ + M G +P + ++N ++ +C +G +
Sbjct: 222 RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAA 281
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M + L PD TY S+I F G EM D P V TYN LI
Sbjct: 282 RGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 341
Query: 202 L----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
+L + +R M L P+VV+Y+TL+ FC KE +++A + +M G++
Sbjct: 342 FCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC--KEGMMQQAIKFYVDMRRVGLV 399
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
P+ TY LI C LS+A+ L EML+ GV N TYT L++ + +A L
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
+M G +P +YNA+I+G + AL +L + G+ PD + Y
Sbjct: 460 FGKMDTAGVIPNL--------ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 378 TVILGFCRIREPGKAYELKVEVDE 401
T I G C + + A + E+ E
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKE 535
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 161/402 (40%), Gaps = 60/402 (14%)
Query: 56 FELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTE 115
+ + + G + VES + + A D + +VL+ + D + + T
Sbjct: 131 WSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLS-----KADCDVFDVLWSTR 185
Query: 116 RGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGK 175
P F+A+ L G + M + + P R+ L+H F G
Sbjct: 186 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDD 245
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRL--------------------------------- 202
++ +MI +G P+V TYN +I +
Sbjct: 246 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 203 ------RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
RL+D V F M + PDV+TYN LI+ FCK + L E EM G+
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK--LPIGLEFYREMKGNGL 363
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
P+ +Y L+ C + + +A + +M R G+ PN TYT L++A G S AF
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
L +EM G + VTY A+I GLC R +EA + M G+ P+ SY
Sbjct: 424 LGNEMLQ--------VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASY 475
Query: 377 CTVILGFCRIREPGKAYELKVEVD------ENMISWLGIWGL 412
+I GF + + +A EL E+ + ++ IWGL
Sbjct: 476 NALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 140/315 (44%), Gaps = 15/315 (4%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+V TY +L+ A C + +A + M + G++ N++++ A++ GLC RM
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M+ + P+ +Y +LIH F + +A ++L+E+ G P + Y I L
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
++E A V M E + + + Y TL+ + K P + + EM I
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP--TEGLHLLDEMKELDIEV 575
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLR-WGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
T+ LI LC + +S+A D F + +G+ N +T +++ + Q A L
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
++M KG + P Y +++ G G EAL + M EIG+ D ++Y
Sbjct: 636 FEQMVQKGLV--------PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 378 TVILGFCRIREPGKA 392
+++ G + KA
Sbjct: 688 SLVWGLSHCNQLQKA 702
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 146/347 (42%), Gaps = 31/347 (8%)
Query: 39 FTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYC 98
+T++ + + + AF L + GVE N V TY AL+ C
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV----------------TYTALIDGLC 448
Query: 99 CDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDER 158
ER+ EA + M G+ PNL S+NA++ G M + + + PD
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGM 214
Y + I C A+ V++EM + G + Y L+ + + + + M
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK-GILPDADTYEPLIRTLCLQ 273
E D+ VVT+ LI CK K + KA + + + G+ +A + +I LC
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKL--VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Query: 274 QRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTG 333
++ A LF +M++ G+ P+ YT LM+ +G +A L+D+M G
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE--------IG 678
Query: 334 FSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
+ Y ++++GL + ++A L M G+ PD V +V+
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 725
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 150/318 (47%), Gaps = 14/318 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY++L++ +D MG+L+ M GLKPN+ +F ++ L G++ M
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---RLE 205
+ + PD TYT LI C A++V +M P TY L+ R R
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 206 DAVGVFRGMTERD-LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
D+V F E+D PDVVT+ L+ C K + +AF+ M +GILP+ TY
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALC--KAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI L RL +A +LF M GV P TY ++ Y G A ++M K
Sbjct: 403 TLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G +P+ V NA +Y L GR EA + G+ +IGL PD+V+Y ++ +
Sbjct: 463 --------GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 385 RIREPGKAYELKVEVDEN 402
++ E +A +L E+ EN
Sbjct: 515 KVGEIDEAIKLLSEMMEN 532
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 147/348 (42%), Gaps = 34/348 (9%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E + V + T+ LV A C EA L M ++G+ PNL ++N ++ GL R+
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M + P TY I + G A + +M G +P++ N
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
+ L R +A +F G+ + L PD VTYN ++ + K+ E D +A ++ +EM+
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID--EAIKLLSEMMEN 532
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G PD LI TL R+ EA+ +F M + P TY L+ G+ +A
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 315 FHLQDEMTHKGFLPGFVT---------------------------GFSPSHVTYNAIIYG 347
L + M KG P +T G P TYN II+G
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFG 652
Query: 348 LCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
L G+ +EA+ M ++ + PD V+ CT++ G + AY++
Sbjct: 653 LVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKI 699
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 134/299 (44%), Gaps = 16/299 (5%)
Query: 84 VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX 143
+ + TYN L+ AY ++DE + + M+ + N I+ N V+ GL G +
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 144 XXX-XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M+ +D +P TY LI G +A+++ M+D G P+ A YN LI
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
+ A +F+ M + + PD+ TY+ L+ C + D + E+ G+ P
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD--EGLHYFKELKESGLNP 994
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREM-LRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
D Y +I L RL EA LF EM G++P+ TY L+ I G +A +
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
+E+ G P+ T+NA+I G L G+ E A V + M G SP+ +Y
Sbjct: 1055 YNEIQR--------AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 149/338 (44%), Gaps = 19/338 (5%)
Query: 68 ESNSVSGRRIREAEQVVD-----ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNL 122
+ N+VSG R + D + TYN L+ + ++ A + + G P++
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 123 ISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSE 182
++N ++ G++ M+ + + T+ +I G+ A + +
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 183 MI-DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLK 237
++ D FSP+ TY LI L RL +A +F GM + P+ YN LI+ F K
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 238 EPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNET 297
E D A + MV +G+ PD TY L+ LC+ R+ E F+E+ G++P+
Sbjct: 941 EAD--AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 298 YTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEA 357
Y ++N + +A L +EM G +P TYN++I L + G EEA
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTS-------RGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 358 LGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+ + GL P+ ++ +I G+ +P AY +
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 14/318 (4%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
+V T T N ++ A D +++E + M +R +K + ++ + + L KG +
Sbjct: 113 NLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQA 172
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI-- 199
M + + +Y LIHL +A +V MI GF PS+ TY+ L+
Sbjct: 173 PYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVG 232
Query: 200 --RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
+R ++ +G+ + M L P+V T+ I + + + +A+E+ M +G
Sbjct: 233 LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK--INEAYEILKRMDDEGCG 290
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
PD TY LI LC ++L A ++F +M P+ TY L++ +
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
EM G +P VT+ ++ LC G EA L M + G+ P+ +Y
Sbjct: 351 WSEMEKDGHVPDV--------VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 378 TVILGFCRIREPGKAYEL 395
T+I G R+ A EL
Sbjct: 403 TLICGLLRVHRLDDALEL 420
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 127/287 (44%), Gaps = 24/287 (8%)
Query: 48 ESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAM 107
+S K+ FEL K + E+N++ T+N ++ VD+A+
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTI----------------THNIVISGLVKAGNVDDAL 875
Query: 108 GILR-CMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHL 166
+ M++R P ++ ++ GL GR+ M P+ Y LI+
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 167 FCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPD 222
F G A + M+ G P + TY+ L+ L R+++ + F+ + E L+PD
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 223 VVTYNTLISKFCKLKEPDLEKAFEMKAEM-VHKGILPDADTYEPLIRTLCLQQRLSEAYD 281
VV YN +I+ K LE+A + EM +GI PD TY LI L + + EA
Sbjct: 996 VVCYNLIINGLGKSHR--LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK 1053
Query: 282 LFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
++ E+ R G+ PN T+ L+ Y + G+ A+ + M GF P
Sbjct: 1054 IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 170/466 (36%), Gaps = 127/466 (27%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNA 92
N++++ ++ VG + A +LL E G E + + N+
Sbjct: 507 NMMMKCYSKVGEIDE-------AIKLLSEMMENGCEPDVI----------------VVNS 543
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ +RVDEA + M E LKP ++++N ++ GL G++ M QK
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAV 208
P+ T+ +L C A K+L +M+D G P V TYN +I L ++++A+
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCK--------------------------------- 235
F M ++ + PD VT TL+ K
Sbjct: 664 CFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGS 722
Query: 236 -LKEPDLEKAFEMKAEMVHKGILPDADTY-EPLIRTLCLQQRLSE--------------- 278
L E ++ A +V GI D D+ P+IR C +S
Sbjct: 723 ILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQ 782
Query: 279 ---------------------AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
A D+F ++ G P+ TY L++AY G+ + F L
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 318 QDEM----------THKGFLPGFVTG------------------FSPSHVTYNAIIYGLC 349
EM TH + G V FSP+ TY +I GL
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 350 LLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
GR EA + GM + G P+ Y +I GF + E A L
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 7/220 (3%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY L+ R+ EA + M + G +PN +N ++ G G M
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
++ + PD +TY+ L+ C G + E+ +SG +P V YN +I L RL
Sbjct: 953 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRL 1012
Query: 205 EDAVGVFRGM-TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
E+A+ +F M T R ++PD+ TYN+LI +E+A ++ E+ G+ P+ T+
Sbjct: 1013 EEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM--VEEAGKIYNEIQRAGLEPNVFTF 1070
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMN 303
LIR L + AY +++ M+ G SPN TY L N
Sbjct: 1071 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 142/311 (45%), Gaps = 34/311 (10%)
Query: 151 KDLA--PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
KDL P TY LI + A+ V ++ +G P VATYN L+ + ++
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAE-MVHKGILPDADTY 263
++ +++ M+ + + +T+N +IS +K +++ A ++ + M + P A TY
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGL--VKAGNVDDALDLYYDLMSDRDFSPTACTY 894
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
PLI L RL EA LF ML +G PN Y L+N + G+ A L M
Sbjct: 895 GPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVK 954
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
+G P TY+ ++ LC++GR +E L + + E GL+PD V Y +I G
Sbjct: 955 EGVRPDL--------KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 384 CRIREPGKAYELKVEVD------------ENMISWLGIWGLFEDTRKSLMQ----GLS-N 426
+ +A L E+ ++I LGI G+ E+ K + GL N
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Query: 427 EDTFSSLMNDY 437
TF++L+ Y
Sbjct: 1067 VFTFNALIRGY 1077
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCM-TERGLKPNLISFNAVVQGLCGKGRMXXXXXX 144
+ YN ++ R++EA+ + M T RG+ P+L ++N+++ L G +
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
+ + L P+ T+ +LI + G P A V M+ GFSP+ TY +L R
Sbjct: 1055 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNR 1111
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 250 EMVHKGILP-DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
+++ K I+ D +TY + ++L ++ L +A R+M +G N +Y GL++
Sbjct: 142 DLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKS 201
Query: 309 GQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIG 368
++A + M + GF PS TY++++ GL + +G+L+ M +G
Sbjct: 202 RFCTEAMEVYRRM--------ILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 369 LSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
L P+ ++ I R + +AYE+ +D+
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 153/354 (43%), Gaps = 53/354 (14%)
Query: 84 VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX 143
+ + +N + C + +V A+ CM +RG +P+++S+ ++ GL G++
Sbjct: 111 IPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVE 170
Query: 144 XXXXMNQKDLAPDER------------------------------------TYTSLIHLF 167
M + ++PD + Y +LI F
Sbjct: 171 IWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGF 230
Query: 168 CDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDV 223
C G KA + S M G P + TYN L+ L+ A GV M + D
Sbjct: 231 CKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDA 290
Query: 224 VTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLF 283
+YN L+ + C++ PD F +K EM +G D +Y LI T C +AY LF
Sbjct: 291 YSYNQLLKRHCRVSHPDKCYNFMVK-EMEPRG-FCDVVSYSTLIETFCRASNTRKAYRLF 348
Query: 284 REMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNA 343
EM + G+ N TYT L+ A+ EG S A L D+MT G SP + Y
Sbjct: 349 EEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTE--------LGLSPDRIFYTT 400
Query: 344 IIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC---RIREPGKAYE 394
I+ LC G ++A GV M E ++PDA+SY ++I G C R+ E K +E
Sbjct: 401 ILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 174/402 (43%), Gaps = 39/402 (9%)
Query: 9 LLTRPNPMKL-LRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGV 67
LL R N + ++ C+ R P+V+ +T + N + KV A E+ A GV
Sbjct: 123 LLCRENKVGFAVQTFFCMVQRGREPDVV--SYTILINGLFRAGKVTDAVEIWNAMIRSGV 180
Query: 68 ESNSVS----------GRRIREAEQVVDE----------TTTYNALVLAYCCDERVDEAM 107
++ + R++ A ++V E T YNAL+ +C R+++A
Sbjct: 181 SPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAE 240
Query: 108 GILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLF 167
+ M++ G +P+L+++N ++ + M + + D +Y L+
Sbjct: 241 ALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRH 300
Query: 168 CDKGHPGKARK-VLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPD 222
C HP K ++ EM GF V +Y+ LI R A +F M ++ + +
Sbjct: 301 CRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMN 359
Query: 223 VVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDL 282
VVTY +LI F L+E + A ++ +M G+ PD Y ++ LC + +AY +
Sbjct: 360 VVTYTSLIKAF--LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGV 417
Query: 283 FREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYN 342
F +M+ ++P+ +Y L++ G+ ++A L ++M K P +T+
Sbjct: 418 FNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK--------ECCPDELTFK 469
Query: 343 AIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
II GL + A V M + G + D T+I C
Sbjct: 470 FIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 92/244 (37%), Gaps = 49/244 (20%)
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNR----LIRRLRLEDAVGVFRGM 214
Y S I G A +V EM S + YNR L+R R E A ++ M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
S TY+ IS CK+K+ DL A + ++M G +PD + + LC +
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDA--LLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
++ A F M++ G P+
Sbjct: 129 KVGFAVQTFFCMVQRGREPD---------------------------------------- 148
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
V+Y +I GL G+ +A+ + M G+SPD + +++G C R+ AYE
Sbjct: 149 ---VVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 395 LKVE 398
+ E
Sbjct: 206 MVAE 209
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 149/309 (48%), Gaps = 16/309 (5%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+V TYN ++ YC RV+EA+ +L M +G P+ +S+ ++ LC + R+
Sbjct: 308 IVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVR 367
Query: 143 XXXXXMNQKD-LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M ++ L PD+ TY +LIH+ H +A L + + GF Y+ ++
Sbjct: 368 DLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHA 427
Query: 202 L----RLEDAVGVFRGMTER-DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
L R+ +A + M + PDVVTY +++ FC+L E D KA ++ M G
Sbjct: 428 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVD--KAKKLLQVMHTHGH 485
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
P+ +Y L+ +C + EA ++ SPN+ TY+ +M+ R EG+ S+A
Sbjct: 486 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 545
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
+ EM KGF PG V N ++ LC GR EA + G + + V++
Sbjct: 546 VVREMVLKGFFPG--------PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 597
Query: 377 CTVILGFCR 385
TVI GFC+
Sbjct: 598 TTVIHGFCQ 606
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 175/398 (43%), Gaps = 46/398 (11%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAEQ 82
N +IRG+ + +V A ELL+ KG + VS +RI E
Sbjct: 316 NCMIRGYCDL-------HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRD 368
Query: 83 V----------VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+ V + TYN L+ + DEA+ L+ E+G + + + ++A+V L
Sbjct: 369 LMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHAL 428
Query: 133 CGKGRMXXXXXXXXXMNQK-DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPS 191
C +GRM M K PD TYT++++ FC G KA+K+L M G P+
Sbjct: 429 CKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488
Query: 192 VATY----NRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM 247
+Y N + R + +A + E SP+ +TY+ ++ +E L +A ++
Sbjct: 489 TVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGL--RREGKLSEACDV 546
Query: 248 KAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRI 307
EMV KG P L+++LC R EA E L G + N +T +++ +
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 308 EGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEI 367
+ A + D+M ++ TY ++ L GR EA +++ M
Sbjct: 607 NDELDAALSVLDDM--------YLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK 658
Query: 368 GLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMIS 405
G+ P V+Y TVI +C++ GK +L V + E MIS
Sbjct: 659 GIDPTPVTYRTVIHRYCQM---GKVDDL-VAILEKMIS 692
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 143/327 (43%), Gaps = 18/327 (5%)
Query: 109 ILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFC 168
+L M RG+ +F+ V+ G++ M + + P+ + I +F
Sbjct: 229 VLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 288
Query: 169 DKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVV 224
KA + L M G P+V TYN +IR R+E+A+ + M + PD V
Sbjct: 289 RANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKV 348
Query: 225 TYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFR 284
+Y T++ CK K +E MK G++PD TY LI L EA +
Sbjct: 349 SYYTIMGYLCKEKRI-VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLK 407
Query: 285 EMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAI 344
+ G + Y+ +++A EG+ S+A L +EM KG P P VTY A+
Sbjct: 408 DAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP-------PDVVTYTAV 460
Query: 345 IYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
+ G C LG ++A +L+ M G P+ VSY ++ G CR GK+ E + ++ +
Sbjct: 461 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT---GKSLEAREMMNMSEE 517
Query: 405 SWLGIWGLFEDTRKSLMQGLSNEDTFS 431
W W T +M GL E S
Sbjct: 518 HW---WSPNSITYSVIMHGLRREGKLS 541
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 21/313 (6%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
++ ++++Y ++ +A+ +L M G++PNL+ N + R+ M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
+ P+ TY +I +CD +A ++L +M G P +Y L + R+
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 205 EDAVGVFRGMT-ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
+ + + M E L PD VTYNTLI K D F A+ KG D Y
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQ--EKGFRIDKLGY 421
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWG-VSPNNETYTGLMNAYRIEGQFSKAFHLQDEM- 321
++ LC + R+SEA DL EML G P+ TYT ++N + G+ KA L M
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMH 481
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
TH G P+ V+Y A++ G+C G++ EA ++ E SP++++Y ++
Sbjct: 482 TH---------GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 382 GFCRIREPGKAYE 394
G +R GK E
Sbjct: 533 G---LRREGKLSE 542
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 159/355 (44%), Gaps = 27/355 (7%)
Query: 55 AFELLKAGTEKGVESNSVSGRRIREAEQVVDE----------TTTYNALVLAYCCDERVD 104
F + K G V + GR + EA+ +++E TY A+V +C VD
Sbjct: 413 GFRIDKLGYSAIVHALCKEGR-MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVD 471
Query: 105 EAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLI 164
+A +L+ M G KPN +S+ A++ G+C G+ + +P+ TY+ ++
Sbjct: 472 KAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIM 531
Query: 165 HLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLS 220
H +G +A V+ EM+ GF P N L++ L R +A + +
Sbjct: 532 HGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCA 591
Query: 221 PDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAY 280
+VV + T+I FC+ E L+ A + +M D TY L+ TL + R++EA
Sbjct: 592 INVVNFTTVIHGFCQNDE--LDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEAT 649
Query: 281 DLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVT 340
+L ++ML G+ P TY +++ Y G+ + ++M +
Sbjct: 650 ELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR----------QKCRTI 699
Query: 341 YNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
YN +I LC+LG+ EEA +L + DA + ++ G+ + P AY++
Sbjct: 700 YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKV 754
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 140/322 (43%), Gaps = 31/322 (9%)
Query: 31 PPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS-----------GRRI-- 77
PP+V+ +TAV N +V A +LL+ G + N+VS G+ +
Sbjct: 451 PPDVVT--YTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Query: 78 REAEQVVDE------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQG 131
RE + +E + TY+ ++ + ++ EA ++R M +G P + N ++Q
Sbjct: 509 REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQS 568
Query: 132 LCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPS 191
LC GR K A + +T++IH FC A VL +M
Sbjct: 569 LCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHAD 628
Query: 192 VATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL-KEPDLEKAFE 246
V TY L+ L R+ +A + + M + + P VTY T+I ++C++ K DL E
Sbjct: 629 VFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILE 688
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
+M+ + Y +I LC+ +L EA L ++LR + +T LM Y
Sbjct: 689 ---KMISRQKC--RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYL 743
Query: 307 IEGQFSKAFHLQDEMTHKGFLP 328
+G A+ + M ++ +P
Sbjct: 744 KKGVPLSAYKVACRMFNRNLIP 765
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 137/300 (45%), Gaps = 17/300 (5%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
TYN L+ + + +++EA M G SFN +++G C +G
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL----IRRLR 203
M + P TY I CD G AR++LS M +P V +YN L I+ +
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGK 389
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
+A +F + D+ P +VTYNTLI C + +LE A +K EM + I PD TY
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLC--ESGNLEGAQRLKEEMTTQLIFPDVITY 447
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
L++ LS A +++ EMLR G+ P+ YT G KAF L +EM
Sbjct: 448 TTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
+P YN I GLC +G +A+ R + +GL PD V+Y TVI G+
Sbjct: 508 -------TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 560
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 174/393 (44%), Gaps = 39/393 (9%)
Query: 33 NVIIRGFTAVGNLQSESKKVGG-----AFELLKAGTEKGVESNSVSGRRIREAEQVVDE- 86
N++I GF+ G ++ E+++ G F + +E G +A V DE
Sbjct: 277 NILINGFSKNGKME-EARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL-FDDAWGVTDEM 334
Query: 87 --------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
T+TYN + A C R+D+A +L M P+++S+N ++ G G+
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKF 390
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
+ D+ P TY +LI C+ G+ A+++ EM P V TY L
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV-- 252
++ L A V+ M + + PD Y T +L+ D +KAF + EMV
Sbjct: 451 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT--RAVGELRLGDSDKAFRLHEEMVAT 508
Query: 253 -HKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
H PD Y I LC L +A + R++ R G+ P++ TYT ++ Y GQF
Sbjct: 509 DHHA--PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 312 SKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
A +L DEM K P S +TY +IYG GR E+A M + G+ P
Sbjct: 567 KMARNLYDEMLRKRLYP--------SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP 618
Query: 372 DAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
+ +++ ++ G C+ +AY +++E I
Sbjct: 619 NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 150/319 (47%), Gaps = 20/319 (6%)
Query: 76 RIREAEQVVD-----ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
RI +A +++ + +YN L+ Y + EA + + + P+++++N ++
Sbjct: 358 RIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID 417
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
GLC G + M + + PD TYT+L+ F G+ A +V EM+ G P
Sbjct: 418 GLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP 477
Query: 191 SVATY-NRLIRRLRLEDAVGVFRGMTER----DLSPDVVTYNTLISKFCKLKEPDLEKAF 245
Y R + LRL D+ FR E +PD+ YN I CK+ +L KA
Sbjct: 478 DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV--GNLVKAI 535
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY 305
E + ++ G++PD TY +IR + A +L+ EMLR + P+ TY L+ +
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595
Query: 306 RIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMP 365
G+ +AF EM + G P+ +T+NA++YG+C G +EA L M
Sbjct: 596 AKAGRLEQAFQYSTEMKKR--------GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 647
Query: 366 EIGLSPDAVSYCTVILGFC 384
E G+ P+ SY +I C
Sbjct: 648 EEGIPPNKYSYTMLISKNC 666
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 180 LSEMIDSGFSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDVVTYNTLISKFCK 235
+MI GF PSV N +++ LR + A V+ M E + P V+T+NT++ C
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDS-C- 248
Query: 236 LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
K DLE+ ++ EM + I TY LI ++ EA +M R G +
Sbjct: 249 FKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP 308
Query: 296 ETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAE 355
++ L+ Y +G F A+ + DEM + G P+ TYN I LC GR +
Sbjct: 309 YSFNPLIEGYCKQGLFDDAWGVTDEMLN--------AGIYPTTSTYNIYICALCDFGRID 360
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
+A +L M +PD VSY T++ G+ ++ GK E + D+
Sbjct: 361 DARELLSSMA----APDVVSYNTLMHGYIKM---GKFVEASLLFDD 399
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 6/187 (3%)
Query: 120 PNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKV 179
P+L +N + GLC G + + + L PD TYT++I + + G AR +
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 180 LSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK 235
EM+ PSV TY LI + RLE A M +R + P+V+T+N L+ CK
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 236 LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
++++A+ +M +GI P+ +Y LI C ++ E L++EML + P+
Sbjct: 633 --AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 690
Query: 296 ETYTGLM 302
T+ L
Sbjct: 691 YTHRALF 697
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 110/265 (41%), Gaps = 29/265 (10%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLR 203
M +K P R ++ + D KA V MI+ G P+V T+N ++ +
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
LE ++ M R++ VTYN LI+ F K +E+A +M G ++
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFS--KNGKMEEARRFHGDMRRSGFAVTPYSF 311
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL------ 317
PLI C Q +A+ + EML G+ P TY + A G+ A L
Sbjct: 312 NPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA 371
Query: 318 QDEMTHKGFLPGFVT-----------------GFSPSHVTYNAIIYGLCLLGRAEEALGV 360
D +++ + G++ PS VTYN +I GLC G E A +
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCR 385
M + PD ++Y T++ GF +
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVK 456
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 115/270 (42%), Gaps = 11/270 (4%)
Query: 68 ESNSVSG-RRIRE---AEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLI 123
ES ++ G +R++E + + + TY LV + + + A + M +G+KP+
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480
Query: 124 SFNAVVQGLCGKGRMXXXXXXXXXMNQKDL-APDERTYTSLIHLFCDKGHPGKARKVLSE 182
++ G G M D APD Y I C G+ KA + +
Sbjct: 481 AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRK 540
Query: 183 MIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE 238
+ G P TY +IR + + A ++ M + L P V+TY LI + K
Sbjct: 541 IFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI--YGHAKA 598
Query: 239 PDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETY 298
LE+AF+ EM +G+ P+ T+ L+ +C + EAY +M G+ PN +Y
Sbjct: 599 GRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY 658
Query: 299 TGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
T L++ ++ + L EM K P
Sbjct: 659 TMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 30/276 (10%)
Query: 20 RLSTCLRNRLSPPNVI-----IRGFTAVGNLQSESKKVGGAFELLKAG--------TEKG 66
RL + +L P+VI ++GF GNL ++ E+L+ G T +
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD---EMLRKGIKPDGYAYTTRA 486
Query: 67 VES----NSVSGRRIREAEQVVD----ETTTYNALVLAYCCDERVDEAMGILRCMTERGL 118
V +S R+ E D + T YN + C + +A+ R + GL
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 119 KPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARK 178
P+ +++ V++G G+ M +K L P TY LI+ G +A +
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 179 VLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFC 234
+EM G P+V T+N L+ + +++A M E + P+ +Y LISK C
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Query: 235 KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTL 270
++ E+ ++ EM+ K I PD T+ L + L
Sbjct: 667 DFEK--WEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 165/386 (42%), Gaps = 50/386 (12%)
Query: 51 KVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGIL 110
KV A LK +KG+E N V YN ++LA+C + +D A I
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVV----------------FYNNMMLAHCRMKNMDLARSIF 507
Query: 111 RCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDK 170
M E+GL+PN +++ ++ G MN + +E Y ++I+ C
Sbjct: 508 SEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKV 567
Query: 171 GHPGKARKVLSEMI-DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVT 225
G KA+++L +I + +S S +YN +I + AV +R M+E SP+VVT
Sbjct: 568 GQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVT 627
Query: 226 YNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFRE 285
+ +LI+ FCK DL A EM EM + D Y LI C + + AY LF E
Sbjct: 628 FTSLINGFCKSNRMDL--ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSE 685
Query: 286 MLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT------------- 332
+ G+ PN Y L++ +R G+ A L +M + G T
Sbjct: 686 LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745
Query: 333 --------------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
G P + + ++ GL G+ +A +L M + ++P+ + Y T
Sbjct: 746 INLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYST 805
Query: 379 VILGFCRIREPGKAYELKVEVDENMI 404
VI G R +A+ L E+ E I
Sbjct: 806 VIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 134/273 (49%), Gaps = 19/273 (6%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
T+YN+++ + D A+ R M+E G PN+++F +++ G C RM
Sbjct: 591 TSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHE 650
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR---- 203
M +L D Y +LI FC K A + SE+ + G P+V+ YN LI R
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
++ A+ +++ M +S D+ TY T+I LK+ ++ A ++ +E++ GI+PD +
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGL--LKDGNINLASDLYSELLDLGIVPDEILH 768
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
L+ L + + +A + EM + V+PN Y+ ++ + EG ++AF L DEM
Sbjct: 769 MVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLE 828
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEE 356
KG + ++ ++ L + GR E+
Sbjct: 829 KG-------------IVHDDTVFNLLVSGRVEK 848
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 150/336 (44%), Gaps = 23/336 (6%)
Query: 77 IREAEQVVDETTTY---------NALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNA 127
+ EA +V+DE + +LV YC + +A+ + M E GL P+ + F+
Sbjct: 326 MEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSV 385
Query: 128 VVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG 187
+V+ C M M +AP ++I P A ++ ++ +S
Sbjct: 386 MVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESW 445
Query: 188 FSPSV---ATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKA 244
+ + ++ +++ A + M ++ + P+VV YN ++ C++K DL ++
Sbjct: 446 IAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARS 505
Query: 245 FEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNA 304
+ +EM+ KG+ P+ TY LI + A+D+ +M N Y ++N
Sbjct: 506 --IFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIING 563
Query: 305 YRIEGQFSKAFH-LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRG 363
GQ SKA LQ+ + K + S S +YN+II G +G + A+ R
Sbjct: 564 LCKVGQTSKAKEMLQNLIKEKRY--------SMSCTSYNSIIDGFVKVGDTDSAVETYRE 615
Query: 364 MPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
M E G SP+ V++ ++I GFC+ A E+ E+
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 153/387 (39%), Gaps = 69/387 (17%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
V + T L+ A + + +EA+ I R + RG +P+ + F+ VQ C +
Sbjct: 235 VAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMAL 294
Query: 143 XXXXXMNQKDLAP-DERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI-- 199
M K P + TYTS+I F +G+ +A +V+ EM+ G SV L+
Sbjct: 295 DLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNG 354
Query: 200 --RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
+ L A+ +F M E L+PD V ++ ++ FCK E +EKA E M I
Sbjct: 355 YCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNME--MEKAIEFYMRMKSVRIA 412
Query: 258 PDA------------------------DTYEPLIR----------TLCLQQRLSEAYDLF 283
P + D++E I C Q ++ A
Sbjct: 413 PSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFL 472
Query: 284 REMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP----------GF--- 330
+ M + G+ PN Y +M A+ A + EM KG P GF
Sbjct: 473 KMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKN 532
Query: 331 --------------VTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGM-PEIGLSPDAVS 375
+ F + V YN II GLC +G+ +A +L+ + E S S
Sbjct: 533 KDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTS 592
Query: 376 YCTVILGFCRIREPGKAYELKVEVDEN 402
Y ++I GF ++ + A E E+ EN
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSEN 619
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
+ YN+L+ + ++D A+ + + M G+ +L ++ ++ GL G +
Sbjct: 695 VSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYS 754
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLED 206
+ + PDE + L++ KG KA K+L E
Sbjct: 755 ELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEE------------------------ 790
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
M ++D++P+V+ Y+T+I+ +E +L +AF + EM+ KGI+ D + L
Sbjct: 791 -------MKKKDVTPNVLLYSTVIAG--HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLL 841
Query: 267 I 267
+
Sbjct: 842 V 842
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 157/322 (48%), Gaps = 21/322 (6%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
Q ++T T+N L+ C + ++A+ +L M+ G +P+++++N ++QG C +
Sbjct: 201 QSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKA 260
Query: 142 XXXXXXMNQKDL-APDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI- 199
+ + +PD TYTS+I +C G +A +L +M+ G P+ T+N L+
Sbjct: 261 SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Query: 200 ------RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH 253
L E+ G M PDVVT+ +LI +C++ + + + F + EM
Sbjct: 321 GYAKAGEMLTAEEIRG---KMISFGCFPDVVTFTSLIDGYCRVGQ--VSQGFRLWEEMNA 375
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK 313
+G+ P+A TY LI LC + RL +A +L ++ + P Y +++ + G+ ++
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE 435
Query: 314 AFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
A + +EM K P +T+ +I G C+ GR EA+ + M IG SPD
Sbjct: 436 ANVIVEEMEKKKC--------KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 374 VSYCTVILGFCRIREPGKAYEL 395
++ +++ + +AY L
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHL 509
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 142/324 (43%), Gaps = 22/324 (6%)
Query: 19 LRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGG-----------AFELLKAGTEKGV 67
LR +C N N++IRG VG + + +G + L G K
Sbjct: 198 LRFQSC--NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSN 255
Query: 68 ESNSVSG--RRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISF 125
E N S + ++ + TY +++ YC ++ EA +L M G+ P ++F
Sbjct: 256 ELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTF 315
Query: 126 NAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMID 185
N +V G G M M PD T+TSLI +C G + ++ EM
Sbjct: 316 NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 186 SGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
G P+ TY+ LI L RL A + + +D+ P YN +I FCK + +
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK--V 433
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
+A + EM K PD T+ LI C++ R+ EA +F +M+ G SP+ T + L
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 302 MNAYRIEGQFSKAFHLQDEMTHKG 325
++ G +A+HL +++ KG
Sbjct: 494 LSCLLKAGMAKEAYHL-NQIARKG 516
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 132/312 (42%), Gaps = 17/312 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN L + C D A + CM G+ PN +V KG++ +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL--HFATALLL 162
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
++ SL++ A K+ E + T+N LIR L +
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL-PDADTY 263
E A+ + M+ PD+VTYNTLI FCK E L KA EM ++ + PD TY
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNE--LNKASEMFKDVKSGSVCSPDVVTY 280
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
+I C ++ EA L +MLR G+ P N T+ L++ Y G+ A ++ +M
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
G P VT+ ++I G C +G+ + + M G+ P+A +Y +I
Sbjct: 341 FGCFPDV--------VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 384 CRIREPGKAYEL 395
C KA EL
Sbjct: 393 CNENRLLKAREL 404
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 23/316 (7%)
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKG--HPGK 175
++ + ++N + + LC G M ++P+ R L+ F +KG H
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK 235
A + S ++ + N L++ R+EDA+ +F D T+N LI C
Sbjct: 159 ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 236 LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV-SPN 294
+ + EKA E+ M G PD TY LI+ C L++A ++F+++ V SP+
Sbjct: 219 VGKA--EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRA 354
TYT +++ Y G+ +A L D+M G P++VT+N ++ G G
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLR--------LGIYPTNVTFNVLVDGYAKAGEM 328
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFE 414
A + M G PD V++ ++I G+CR+ + + + L E++ G+F
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR--------GMFP 380
Query: 415 D--TRKSLMQGLSNED 428
+ T L+ L NE+
Sbjct: 381 NAFTYSILINALCNEN 396
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 157/322 (48%), Gaps = 21/322 (6%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
Q ++T T+N L+ C + ++A+ +L M+ G +P+++++N ++QG C +
Sbjct: 201 QSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKA 260
Query: 142 XXXXXXMNQKDL-APDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI- 199
+ + +PD TYTS+I +C G +A +L +M+ G P+ T+N L+
Sbjct: 261 SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Query: 200 ------RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH 253
L E+ G M PDVVT+ +LI +C++ + + + F + EM
Sbjct: 321 GYAKAGEMLTAEEIRG---KMISFGCFPDVVTFTSLIDGYCRVGQ--VSQGFRLWEEMNA 375
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK 313
+G+ P+A TY LI LC + RL +A +L ++ + P Y +++ + G+ ++
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE 435
Query: 314 AFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
A + +EM K P +T+ +I G C+ GR EA+ + M IG SPD
Sbjct: 436 ANVIVEEMEKKKC--------KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 374 VSYCTVILGFCRIREPGKAYEL 395
++ +++ + +AY L
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHL 509
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 142/324 (43%), Gaps = 22/324 (6%)
Query: 19 LRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGG-----------AFELLKAGTEKGV 67
LR +C N N++IRG VG + + +G + L G K
Sbjct: 198 LRFQSC--NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSN 255
Query: 68 ESNSVSG--RRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISF 125
E N S + ++ + TY +++ YC ++ EA +L M G+ P ++F
Sbjct: 256 ELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTF 315
Query: 126 NAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMID 185
N +V G G M M PD T+TSLI +C G + ++ EM
Sbjct: 316 NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 186 SGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
G P+ TY+ LI L RL A + + +D+ P YN +I FCK + +
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK--V 433
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
+A + EM K PD T+ LI C++ R+ EA +F +M+ G SP+ T + L
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 302 MNAYRIEGQFSKAFHLQDEMTHKG 325
++ G +A+HL +++ KG
Sbjct: 494 LSCLLKAGMAKEAYHL-NQIARKG 516
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 132/312 (42%), Gaps = 17/312 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN L + C D A + CM G+ PN +V KG++ +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL--HFATALLL 162
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
++ SL++ A K+ E + T+N LIR L +
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL-PDADTY 263
E A+ + M+ PD+VTYNTLI FCK E L KA EM ++ + PD TY
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNE--LNKASEMFKDVKSGSVCSPDVVTY 280
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
+I C ++ EA L +MLR G+ P N T+ L++ Y G+ A ++ +M
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
G P VT+ ++I G C +G+ + + M G+ P+A +Y +I
Sbjct: 341 FGCFPDV--------VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 384 CRIREPGKAYEL 395
C KA EL
Sbjct: 393 CNENRLLKAREL 404
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 23/316 (7%)
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKG--HPGK 175
++ + ++N + + LC G M ++P+ R L+ F +KG H
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK 235
A + S ++ + N L++ R+EDA+ +F D T+N LI C
Sbjct: 159 ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 236 LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV-SPN 294
+ + EKA E+ M G PD TY LI+ C L++A ++F+++ V SP+
Sbjct: 219 VGKA--EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRA 354
TYT +++ Y G+ +A L D+M G P++VT+N ++ G G
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLR--------LGIYPTNVTFNVLVDGYAKAGEM 328
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFE 414
A + M G PD V++ ++I G+CR+ + + + L E++ G+F
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR--------GMFP 380
Query: 415 D--TRKSLMQGLSNED 428
+ T L+ L NE+
Sbjct: 381 NAFTYSILINALCNEN 396
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 129/273 (47%), Gaps = 10/273 (3%)
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGH 172
+ E G P++ +N V+ L G+ R+ M + P+ TY L+ C
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISK 232
A+K+L EM + G P +Y +I + V R + ER P V YN LI+
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-FEPVVSVYNALING 255
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
CK E D + AFE+ EMV KGI P+ +Y LI LC ++ A+ +ML+ G
Sbjct: 256 LCK--EHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH 313
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
PN T + L+ + G A L ++M +GF G P+ V YN ++ G C G
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGF------GLQPNVVAYNTLVQGFCSHG 366
Query: 353 RAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
+A+ V M EIG SP+ +Y ++I GF +
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK 399
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 169/411 (41%), Gaps = 74/411 (18%)
Query: 25 LRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVV 84
L R P ++ + A+ N + GAFEL++ EKG+ N +S
Sbjct: 238 LAERFEP---VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVIS----------- 283
Query: 85 DETTTYNALVLAYCCDERVDEAMGILRCMTERG--------------------------- 117
Y+ L+ C +++ A L M +RG
Sbjct: 284 -----YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 118 ---------LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFC 168
L+PN++++N +VQG C G + M + +P+ RTY SLI+ F
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 169 DKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVV 224
+G A + ++M+ SG P+V Y ++ R + ++A + M++ + +P V
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 225 TYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFR 284
T+N I C D + + E H+ P+ TY L+ L R+ EAY L R
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHR-CPPNIVTYNELLDGLAKANRIEEAYGLTR 517
Query: 285 EMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAI 344
E+ GV ++ TY L++ G A L +M V G SP +T N I
Sbjct: 518 EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM--------MVDGKSPDEITMNMI 569
Query: 345 IYGLCLLGRAEEALGVLRGMPEIG---LSPDAVSYCTVILGFCR--IREPG 390
I C G+AE A +L + G PD +SY VI G CR RE G
Sbjct: 570 ILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 171/376 (45%), Gaps = 34/376 (9%)
Query: 48 ESKKVGGAFELLKAGTEKGVESNSVS----------------GRRIREAEQVVDETTTYN 91
++ KV GA +LL + KG ++VS GR + AE+ + YN
Sbjct: 193 KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL--AERFEPVVSVYN 250
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
AL+ C + A ++R M E+G+ PN+IS++ ++ LC G++ M ++
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS-GFSPSVATYNRLIRRL----RLED 206
P+ T +SL+ +G A + ++MI G P+V YN L++ +
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
AV VF M E SP++ TY +LI+ F K L+ A + +M+ G P+ Y +
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFA--KRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
+ LC + EA L M + +P+ T+ + G+ A + +M +
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
P P+ VTYN ++ GL R EEA G+ R + G+ + +Y T++ G C
Sbjct: 489 CP-------PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Query: 387 REPGKAYEL--KVEVD 400
PG A +L K+ VD
Sbjct: 542 GLPGIALQLVGKMMVD 557
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 139/301 (46%), Gaps = 20/301 (6%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YN ++ + R+ + R M G +PN+ ++N +++ LC ++ M+
Sbjct: 149 YNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS 208
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL-RLEDAV 208
K PD +YT++I C+ G + R++ F P V+ YN LI L + D
Sbjct: 209 NKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALINGLCKEHDYK 263
Query: 209 GVF---RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
G F R M E+ +SP+V++Y+TLI+ C +E AF +M+ +G P+ T
Sbjct: 264 GAFELMREMVEKGISPNVISYSTLINVLC--NSGQIELAFSFLTQMLKRGCHPNIYTLSS 321
Query: 266 LIRTLCLQQRLSEAYDLFREMLR-WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
L++ L+ +A DL+ +M+R +G+ PN Y L+ + G KA + M
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE- 380
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G SP+ TY ++I G G + A+ + M G P+ V Y ++ C
Sbjct: 381 -------IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC 433
Query: 385 R 385
R
Sbjct: 434 R 434
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 164/374 (43%), Gaps = 52/374 (13%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS------------------------ 124
TYN L+ A C + +VD A +L M+ +G P+ +S
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF 242
Query: 125 ------FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARK 178
+NA++ GLC + M +K ++P+ +Y++LI++ C+ G A
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 179 VLSEMIDSGFSPSVATYNRLIRRLRLE----DAVGVFRGMTER-DLSPDVVTYNTLISKF 233
L++M+ G P++ T + L++ L DA+ ++ M L P+VV YNTL+ F
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
C ++ KA + + M G P+ TY LI + L A ++ +ML G P
Sbjct: 363 C--SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
N YT ++ A +F +A L + M+ + +PS T+NA I GLC GR
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKE--------NCAPSVPTFNAFIKGLCDAGR 472
Query: 354 AEEALGVLRGMPEIG-LSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGL 412
+ A V R M + P+ V+Y ++ G + +AY L E+ + W
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW------ 526
Query: 413 FEDTRKSLMQGLSN 426
T +L+ G N
Sbjct: 527 SSSTYNTLLHGSCN 540
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 44/262 (16%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY +L+ + +D A+ I M G PN++ + +V+ LC + M
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG-FSPSVATYNRLIRRL----R 203
++++ AP T+ + I CD G A KV +M P++ TYN L+ L R
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
+E+A G+ R + R + TYNTL+ C P + A ++ +M+ G PD T
Sbjct: 509 IEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI--ALQLVGKMMVDGKSPDEITM 566
Query: 264 EPLIRTLCLQ---QRLSEAYDL----------------------------------FREM 286
+I C Q +R ++ DL M
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
Query: 287 LRWGVSPNNETYTGLMNAYRIE 308
+ G+ P+ T++ L+N + ++
Sbjct: 627 ISAGIVPSIATWSVLINCFILD 648
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 189 SPSVATYNRL--IRRLRLED----AVGVFRGMTERDLSPDV-VTYNTLISKFCKLKEPDL 241
SP+ A L ++RLR E A+ F+ + +L +T+ +I K + +
Sbjct: 35 SPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAM--DGQV 92
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLI---RTLCLQQRLSEAYDLFREMLRWGVSPNNETY 298
+ + +M +G D + +I R + L +R A ++F + +G P+ + Y
Sbjct: 93 DSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAER---AVEMFYRIKEFGCDPSVKIY 149
Query: 299 TGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEAL 358
+++ E + + + +M GF P+ TYN ++ LC + + A
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDGF--------EPNVFTYNVLLKALCKNNKVDGAK 201
Query: 359 GVLRGMPEIGLSPDAVSYCTVILGFCRI------REPGKAYELKVEVDENMISWL----G 408
+L M G PDAVSY TVI C + RE + +E V V +I+ L
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHD 261
Query: 409 IWGLFEDTRKSLMQGLS-NEDTFSSLMN 435
G FE R+ + +G+S N ++S+L+N
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLIN 289
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 150/331 (45%), Gaps = 20/331 (6%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGR------MXXXXX 143
+N+LV AYC A +L+ M + G P + +N ++ +CG +
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 144 XXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL- 202
M + ++ +S C G KA V+ EMI GF P +TY++++ L
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 203 ---RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
++E A +F M L DV TY ++ FCK +E+A + EM G P+
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL--IEQARKWFNEMREVGCTPN 552
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
TY LI +++S A +LF ML G PN TY+ L++ + GQ KA + +
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 320 EMTHKGFLPGFVTGFS--------PSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
M +P F P+ VTY A++ G C R EEA +L M G P
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 372 DAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
+ + Y +I G C++ + +A E+K E+ E+
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 187/444 (42%), Gaps = 74/444 (16%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAE 81
PNV+ +TA+ + ++KKV A EL + +G N V+ ++ +A
Sbjct: 551 PNVVT--YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 82 QVVD-------------------------ETTTYNALVLAYCCDERVDEAMGILRCMTER 116
Q+ + TY AL+ +C RV+EA +L M+
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 117 GLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKA 176
G +PN I ++A++ GLC G++ M++ TY+SLI + A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 177 RKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISK 232
KVLS+M+++ +P+V Y +I L + ++A + + M E+ P+VVTY +I
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
F + + +E E+ M KG+ P+ TY LI C L A++L EM +
Sbjct: 789 FGMIGK--IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 846
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGF---------------------- 330
+ Y ++ + E F ++ L DE+ P
Sbjct: 847 THTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL 904
Query: 331 ---VTGFSPSHV----TYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
V FS + V TYN++I LCL + E A + M + G+ P+ S+C++I G
Sbjct: 905 LEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Query: 384 CRIREPGKAYELKVEVDENMISWL 407
R + +A L + I W+
Sbjct: 965 FRNSKISEALLLLDFISHMEIQWI 988
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 164/381 (43%), Gaps = 36/381 (9%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+V + TY +V ++C +++A M E G PN++++ A++ ++
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI----------------DS 186
M + P+ TY++LI C G KA ++ M D+
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 633
Query: 187 GFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
P+V TY L+ + R+E+A + M+ P+ + Y+ LI CK+ + L+
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK--LD 691
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+A E+K EM G TY LI +R A + +ML +PN YT ++
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
+ G+ +A+ L M K G P+ VTY A+I G ++G+ E L +L
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEK--------GCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 363 GMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFEDTRKSLMQ 422
M G++P+ V+Y +I C+ A+ L E+ + W + +++
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH------WPTHTAGYRKVIE 857
Query: 423 GLSNEDTFSSLMNDYLAQDES 443
G + E S + D + QD++
Sbjct: 858 GFNKEFIESLGLLDEIGQDDT 878
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 141/351 (40%), Gaps = 54/351 (15%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLK---------------------------- 119
+TYN L+ A+ +R+D A I R M+ L+
Sbjct: 236 STYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET 295
Query: 120 ----PNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGK 175
P+ + + ++ GLC M P+ TY++L+ +K G+
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGR 355
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRLRLED----AVGVFRGMTERDLSPDVVTYNTLIS 231
++VL+ M+ G PS +N L+ A + + M + P V YN LI
Sbjct: 356 CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG 415
Query: 232 KFCKLKEP---DL----EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFR 284
C K+ DL EKA+ +EM+ G++ + R LC + +A+ + R
Sbjct: 416 SICGDKDSLNCDLLDLAEKAY---SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 285 EMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAI 344
EM+ G P+ TY+ ++N + AF L +EM G + TY +
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV--------YTYTIM 524
Query: 345 IYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+ C G E+A M E+G +P+ V+Y +I + + ++ A EL
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 128/361 (35%), Gaps = 87/361 (24%)
Query: 163 LIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERD 218
L+ C G A + L + D F PS +TYN LI+ RL+ A + R M+ +
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265
Query: 219 LS--------------------------------PDVVTYNTLISKFCKLKEPDLEKAFE 246
L PD V Y LIS C+ E+A +
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASL--FEEAMD 323
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
M LP+ TY L+ +++L + M+ G P+ + + L++AY
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 307 IEGQFSKAFHLQDEMTHKGFLPGFVT---------------------------------G 333
G S A+ L +M G +PG+V G
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAG 443
Query: 334 FSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAY 393
+ + ++ LC G+ E+A V+R M G PD +Y V+ C + A+
Sbjct: 444 VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 394 ELKVEVDEN-----------MISWLGIWGLFEDTRKSLMQ-----GLSNEDTFSSLMNDY 437
L E+ M+ GL E RK + N T+++L++ Y
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 438 L 438
L
Sbjct: 564 L 564
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 151/312 (48%), Gaps = 17/312 (5%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E + V + TYN L+ YC EA+ + M G+ PN++++N+ + G +GRM
Sbjct: 230 EEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRM 289
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
+ + D+ + TYT+LI +C +A ++ M GFSP V TYN +
Sbjct: 290 REATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSI 348
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
+R+L R+ +A + M+ + + PD +T NTLI+ +CK++ D+ A ++K +M+
Sbjct: 349 LRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIE--DMVSAVKVKKKMIES 406
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G+ D +Y+ LI C L A + M+ G SP TY+ L++ + + +
Sbjct: 407 GLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNK---- 462
Query: 315 FHLQDEMTHKGFLPGFVT-GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
QDE+T L F G Y +I +C L + + A + M + GL D+
Sbjct: 463 ---QDEITK--LLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDS 517
Query: 374 VSYCTVILGFCR 385
V + T+ + R
Sbjct: 518 VIFTTMAYAYWR 529
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 136/285 (47%), Gaps = 17/285 (5%)
Query: 104 DEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSL 163
D I + M + G+ N+ +N +V G M +K + PD TY +L
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 164 IHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDL 219
I ++C K +A V M SG +P++ TYN I R R+ +A +FR + + D+
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DV 303
Query: 220 SPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEA 279
+ + VTY TLI +C++ D+++A ++ M +G P TY ++R LC R+ EA
Sbjct: 304 TANHVTYTTLIDGYCRMN--DIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Query: 280 YDLFREMLRWGVSPNNETYTGLMNAY-RIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSH 338
L EM + P+N T L+NAY +IE S A ++ +M +G
Sbjct: 362 NRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS-AVKVKKKMIE--------SGLKLDM 412
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
+Y A+I+G C + E A L M E G SP +Y ++ GF
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGF 457
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 16/262 (6%)
Query: 76 RIREA----EQVVDETT----TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNA 127
R+REA ++ D+ T TY L+ YC +DEA+ + M RG P ++++N+
Sbjct: 288 RMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNS 347
Query: 128 VVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG 187
+++ LC GR+ M+ K + PD T +LI+ +C A KV +MI+SG
Sbjct: 348 ILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESG 407
Query: 188 FSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFC-KLKEPDLE 242
+ +Y LI + L LE+A M E+ SP TY+ L+ F + K+ ++
Sbjct: 408 LKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEIT 467
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
K E E +G+ D Y LIR +C +++ A LF M + G+ ++ +T +
Sbjct: 468 KLLE---EFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMA 524
Query: 303 NAYRIEGQFSKAFHLQDEMTHK 324
AY G+ ++A L D M ++
Sbjct: 525 YAYWRTGKVTEASALFDVMYNR 546
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 32/275 (11%)
Query: 158 RTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---RLEDAVG-VFRG 213
++ L+ + G + V ++ G P + L+ L RL D V +F+
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 214 MTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQ 273
M + + ++ YN L+ K +P EKA ++ +EM KG+ PD TY LI C +
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDP--EKAEKLLSEMEEKGVFPDIFTYNTLISVYCKK 251
Query: 274 QRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL---------QDEMTHK 324
EA + M R GV+PN TY ++ + EG+ +A L + +T+
Sbjct: 252 SMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYT 311
Query: 325 GFLPGFV-----------------TGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEI 367
+ G+ GFSP VTYN+I+ LC GR EA +L M
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 368 GLSPDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
+ PD ++ T+I +C+I + A ++K ++ E+
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIES 406
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G+ P L+ +L Q+ + +F++M++ GV N Y L++A G KA
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
L EM KG P T YN +I C EAL V M G++P+ V
Sbjct: 223 EKLLSEMEEKGVFPDIFT--------YNTLISVYCKKSMHFEALSVQDRMERSGVAPNIV 274
Query: 375 SYCTVILGFC---RIREPGKAY-ELKVEVDENMISW 406
+Y + I GF R+RE + + E+K +V N +++
Sbjct: 275 TYNSFIHGFSREGRMREATRLFREIKDDVTANHVTY 310
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 139/283 (49%), Gaps = 14/283 (4%)
Query: 106 AMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIH 165
A G+L M +RG N+ + N +++GLC M + L PD +Y ++I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 166 LFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSP 221
FC+ KA ++ +EM SG S S+ T+ LI ++++A+G + M L
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 222 DVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYD 281
D+V Y +LI FC E D KA + E++ +G P A TY LIR C +L EA +
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKA--LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 282 LFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTY 341
+F M+ GV PN TYTGL++ G+ +A L + M K P+ VTY
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK--------DEEPNAVTY 355
Query: 342 NAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
N II LC G +A+ ++ M + PD ++Y ++ G C
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 164/360 (45%), Gaps = 39/360 (10%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNA 92
N +IRGF +G L+ S E+ + E+GV N TY
Sbjct: 286 NTLIRGFCKLGQLKEAS-------EIFEFMIERGVRPN----------------VYTYTG 322
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ C + EA+ +L M E+ +PN +++N ++ LC G + M ++
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMI-DSGFS-PSVATYNRLIRRL----RLED 206
PD TY L+ C KG +A K+L M+ DS ++ P V +YN LI L RL
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
A+ ++ + E+ + D VT N L++ LK D+ KA E+ ++ I+ ++DTY +
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNS--TLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
I C L+ A L +M + P+ Y L+++ EG +A+ L +EM
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
P V+ +N +I G G + A +L GM GLSPD +Y +I F ++
Sbjct: 561 FPDVVS--------FNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 143/319 (44%), Gaps = 19/319 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+N L+ C + +A+ +LR M L P++ S+N V++G C + M
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
+ T+ LI FC G +A L EM G + Y LIR L
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ +F + ER SP +TYNTLI FCKL + L++A E+ M+ +G+ P+ TY
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ--LKEASEIFEFMIERGVRPNVYTYT 321
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI LC + EA L M+ PN TY ++N +G + A + + M +
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIG--LSPDAVSYCTVILG 382
P ++TYN ++ GLC G +EA +L M + PD +SY +I G
Sbjct: 382 --------RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 383 FC---RIREPGKAYELKVE 398
C R+ + Y+L VE
Sbjct: 434 LCKENRLHQALDIYDLLVE 452
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 158/338 (46%), Gaps = 12/338 (3%)
Query: 71 SVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
+VS R ++ + +YN ++ +C + +++A+ + M G +L+++ ++
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
C G+M M L D YTSLI FCD G + + + E+++ G SP
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 191 SVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFE 246
TYN LIR +L++A +F M ER + P+V TY LI C + + ++A +
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT--KEALQ 338
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
+ M+ K P+A TY +I LC +++A ++ M + P+N TY L+
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 307 IEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPE 366
+G +A L M + P ++YNA+I+GLC R +AL + + E
Sbjct: 399 AKGDLDEASKLLYLMLKDS------SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 367 IGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
+ D V+ ++ + + KA EL ++ ++ I
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 199/476 (41%), Gaps = 81/476 (17%)
Query: 26 RNRLSPP----NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAE 81
RN L P N +IRGF E K++ A EL G + V
Sbjct: 170 RNSLMPDVFSYNTVIRGFC-------EGKELEKALELANEMKGSGCSWSLV--------- 213
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
T+ L+ A+C ++DEAMG L+ M GL+ +L+ + ++++G C G +
Sbjct: 214 -------TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
+ ++ +P TY +LI FC G +A ++ MI+ G P+V TY LI
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 202 L----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
L + ++A+ + M E+D P+ VTYN +I+K CK + + A E+ M +
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK--DGLVADAVEIVELMKKRRTR 384
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG--VSPNNETYTGLMNAYRIEGQFSKAF 315
PD TY L+ LC + L EA L ML+ P+ +Y L++ E + +A
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 316 HLQDEMTHKGFLPGFVTG----------------------FSPSHV-----TYNAIIYGL 348
+ D + K VT S S + TY A+I G
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 349 CLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL--KVEVDENMISW 406
C G A G+L M L P Y ++ C+ +A+ L +++ D N
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564
Query: 407 LGIWGLFEDTRK--------SLMQGLSNED------TFSSLMNDYLA---QDESVS 445
+ + + + K SL+ G+S T+S L+N +L DE++S
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAIS 620
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 119/250 (47%), Gaps = 17/250 (6%)
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGM 214
+ + L+ + G A VL+ M+ GF+ +V +N L+ R L AV + R M
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
L PDV +YNT+I FC+ KE LEKA E+ EM G T+ LI C
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKE--LEKALELANEMKGSGCSWSLVTWGILIDAFCKAG 226
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
++ EA +EM G+ + YT L+ + G+ + L DE+ + G
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER--------GD 278
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC---RIREPGK 391
SP +TYN +I G C LG+ +EA + M E G+ P+ +Y +I G C + +E +
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 392 AYELKVEVDE 401
L +E DE
Sbjct: 339 LLNLMIEKDE 348
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 161/383 (42%), Gaps = 47/383 (12%)
Query: 32 PNV-----IIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRI--------- 77
PNV +I G VG K A +LL EK E N+V+ I
Sbjct: 315 PNVYTYTGLIDGLCGVG-------KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 78 -REAEQVVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERG--LKPNLISF 125
+A ++V+ + TYN L+ C +DEA +L M + P++IS+
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 126 NAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMID 185
NA++ GLC + R+ + +K A D T L++ G KA ++ ++ D
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 186 SGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
S + TY +I + L A G+ M +L P V YN L+S CK E L
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK--EGSL 545
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
++A+ + EM PD ++ +I + A L M R G+SP+ TY+ L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 302 MNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVL 361
+N + G +A D+M GF P +H+ + + Y + G ++ ++
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEP-------DAHICDSVLKYCIS-QGETDKLTELV 657
Query: 362 RGMPEIGLSPDAVSYCTVILGFC 384
+ + + + D CTV+ C
Sbjct: 658 KKLVDKDIVLDKELTCTVMDYMC 680
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
++V + TY A++ +C ++ A G+L M L+P++ +N ++ LC +G +
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M + + PD ++ +I G A +L M +G SP + TY++LI R
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 202 L----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
L++A+ F M + PD ++++ K+C + + + +K E+ ++V K I+
Sbjct: 609 FLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-KYC-ISQGETDKLTELVKKLVDKDIV 666
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
D + ++ +C S DL + +LR
Sbjct: 667 LDKELTCTVMDYMC---NSSANMDLAKRLLR 694
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 20/195 (10%)
Query: 228 TLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREML 287
T + C+ P L+ A + + V G A L+ L + A+ +R+ML
Sbjct: 41 TKLRSLCEDSNPQLKNAVSVFQQAVDSGS-SLAFAGNNLMAKLVRSRNHELAFSFYRKML 99
Query: 288 RWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT-----GFSPSHVTYN 342
N + +GL+ Y +M GF G + GF+ + +N
Sbjct: 100 ETDTFINFVSLSGLLECYV-------------QMRKTGFAFGVLALMLKRGFAFNVYNHN 146
Query: 343 AIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
++ GLC +A+ +LR M L PD SY TVI GFC +E KA EL E+ +
Sbjct: 147 ILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206
Query: 403 MISW-LGIWGLFEDT 416
SW L WG+ D
Sbjct: 207 GCSWSLVTWGILIDA 221
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 152/335 (45%), Gaps = 38/335 (11%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
IRE + + +YN + + EA +L+ MT++G+ P++ S+N ++ GLC G
Sbjct: 317 IRENDDLA-SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLG 375
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
+ M + + PD TY L+H +C G A+ +L EM+ + P+ T N
Sbjct: 376 MLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Query: 197 RLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM- 251
L+ L R+ +A + R M E+ D VT N ++ C E L+KA E+ M
Sbjct: 436 ILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE--LDKAIEIVKGMR 493
Query: 252 ----------------------VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW 289
+ LPD TY L+ LC R +EA +LF EM+
Sbjct: 494 VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553
Query: 290 GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLC 349
+ P++ Y ++ + +G+ S AF + +M K G S TYN++I GL
Sbjct: 554 KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK--------GCHKSLETYNSLILGLG 605
Query: 350 LLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
+ + E G++ M E G+SP+ +Y T I C
Sbjct: 606 IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 172/372 (46%), Gaps = 47/372 (12%)
Query: 60 KAG-TEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGL 118
KAG T+KG+E + E+ V+ YN +V ++C + R D++ ++ M E GL
Sbjct: 194 KAGLTDKGLELLNA-----MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGL 248
Query: 119 KPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLA----PDERTYTSLIHLFCDKGHPG 174
P++++FN+ + LC +G++ M + P+ TY ++ FC G
Sbjct: 249 VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLE 308
Query: 175 KARKVLSEMIDSGFSPSVATYN----RLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLI 230
A+ + + ++ S+ +YN L+R + +A V + MT++ + P + +YN L+
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
CKL L A + M G+ PDA TY L+ C ++ A L +EM+R
Sbjct: 369 DGLCKLGM--LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCL 350
PN T L+++ G+ S+A L +M KG+ G T VT N I+ GLC
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY--GLDT------VTCNIIVDGLCG 478
Query: 351 LGRAEEALGVLRGM-------------PEIGLS----------PDAVSYCTVILGFCRIR 387
G ++A+ +++GM IGL PD ++Y T++ G C+
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 388 EPGKAYELKVEV 399
+A L E+
Sbjct: 539 RFAEAKNLFAEM 550
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 150/354 (42%), Gaps = 49/354 (13%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+ +T T+N L+ A C VD A + M E+G KPN +F +V+G C G
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M + P++ Y +++ FC +G + K++ +M + G P + T+N I L
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISAL 262
Query: 203 ----RLEDAVGVFRGMTERDL----SPDVVTYNTLISKFCK-------------LKEPD- 240
++ DA +F M + P+ +TYN ++ FCK ++E D
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 241 -------------------LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYD 281
+A + +M KGI P +Y L+ LC LS+A
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 282 LFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTY 341
+ M R GV P+ TY L++ Y G+ A L EM L P+ T
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL--------PNAYTC 434
Query: 342 NAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
N +++ L +GR EA +LR M E G D V+ ++ G C E KA E+
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 176/420 (41%), Gaps = 74/420 (17%)
Query: 26 RNRLSPPNV----IIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR------ 75
RN + P V ++ G+ +VG KV A LL+ N+ +
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVG-------KVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 76 ----RIREAEQVVD---------ETTTYNALVLAYCCDERVDEAMGILRCM--------- 113
RI EAE+++ +T T N +V C +D+A+ I++ M
Sbjct: 442 WKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALG 501
Query: 114 --------------TERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERT 159
E P+LI+++ ++ GLC GR M + L PD
Sbjct: 502 NLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVA 561
Query: 160 YTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAV----GVFRGMT 215
Y IH FC +G A +VL +M G S+ TYN LI L +++ + G+ M
Sbjct: 562 YNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMK 621
Query: 216 ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQR 275
E+ +SP++ TYNT I C+ ++ +E A + EM+ K I P+ +++ LI C +
Sbjct: 622 EKGISPNICTYNTAIQYLCEGEK--VEDATNLLDEMMQKNIAPNVFSFKYLIEAFC---K 676
Query: 276 LSEAYDLFREMLRWGVSPNNET---YTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT 332
+ + +D+ +E+ VS + Y+ + N GQ KA L + + +GF G
Sbjct: 677 VPD-FDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELG--- 732
Query: 333 GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKA 392
Y ++ LC E A G+L M + G D + VI G ++ +A
Sbjct: 733 -----TFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 14/319 (4%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YN L+ + + RV+ + + M G+ P +FN +++ LC + M
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLE 205
+K P+E T+ L+ +C G K ++L+ M G P+ YN ++ R R +
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKL-KEPDLEKAF-EMKAEMVHKGILPDADTY 263
D+ + M E L PD+VT+N+ IS CK K D + F +M+ + P++ TY
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
+++ C L +A LF + + ++Y + G+F +A + +MT
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
K G PS +YN ++ GLC LG +A ++ M G+ PDAV+Y ++ G+
Sbjct: 355 K--------GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Query: 384 CRIREPGKAYELKVEVDEN 402
C + + A L E+ N
Sbjct: 407 CSVGKVDAAKSLLQEMMRN 425
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 173/377 (45%), Gaps = 17/377 (4%)
Query: 36 IRGFTAVGNLQSE---SKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNA 92
+ G T V L SE S+ V L+K +KG+ + + + +++V + Y
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ YC ++ +A+ + M E G++ N N+++ G C G++ MN
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR----LEDAV 208
L PD TY +L+ +C G+ +A K+ +M P+V TYN L++ D +
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIR 268
+++ M +R ++ D ++ +TL+ KL D +A ++ ++ +G+L D T +I
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKL--GDFNEAMKLWENVLARGLLTDTITLNVMIS 514
Query: 269 TLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
LC ++++EA ++ + + P +TY L + Y G +AF +++ M KG P
Sbjct: 515 GLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP 574
Query: 329 GFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIRE 388
YN +I G + ++ + GL+P +Y +I G+C I
Sbjct: 575 TI--------EMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 389 PGKAYELKVEVDENMIS 405
KAY E+ E I+
Sbjct: 627 IDKAYATCFEMIEKGIT 643
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 14/314 (4%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
TYN+L+ Y V+ +LR M+ERG+ N++++ ++++G C KG M
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRL 202
+ +K L D+ Y L+ +C G A +V MI+ G + N LI +
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
+L +A +F M + L PD TYNTL+ +C+ D +A ++ +M K ++P T
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVD--EALKLCDQMCQKEVVPTVMT 438
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y L++ + L++ ML+ GV+ + + + L+ A G F++A L + +
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
+G L +T N +I GLC + + EA +L + P +Y + G
Sbjct: 499 ARGLL--------TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHG 550
Query: 383 FCRIREPGKAYELK 396
+ ++ +A+ +K
Sbjct: 551 YYKVGNLKEAFAVK 564
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 158/343 (46%), Gaps = 27/343 (7%)
Query: 76 RIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
++ EA++++D TY AL Y + EA + M +G+ P + +N
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYN 580
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
++ G + + + L P TY +LI +C+ G KA EMI+
Sbjct: 581 TLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK 640
Query: 187 GFSPSV----ATYNRLIRRLRLEDAVGVFRGMTERDLS-PDVVTYNTLI--SKFCKLKEP 239
G + +V N L R ++++A + + + + DL P + + S LK
Sbjct: 641 GITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQ 700
Query: 240 DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG-VSPNNETY 298
+ ++ E K ++P+ Y I LC +L +A LF ++L P+ TY
Sbjct: 701 KIAESVENSTP--KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTY 758
Query: 299 TGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEAL 358
T L++ I G +KAF L+DEM KG +P VT YNA+I GLC LG + A
Sbjct: 759 TILIHGCAIAGDINKAFTLRDEMALKGIIPNIVT--------YNALIKGLCKLGNVDRAQ 810
Query: 359 GVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
+L +P+ G++P+A++Y T+I G + +A LK ++ E
Sbjct: 811 RLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIE 853
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 142/322 (44%), Gaps = 19/322 (5%)
Query: 72 VSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQG 131
V G +R ++ T ++ ++ Y V A+ + M G P+L+S N+++
Sbjct: 140 VWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSN 199
Query: 132 LCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS-GFSP 190
L KG M +++PD T + +++ +C G+ KA E S G
Sbjct: 200 LVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLEL 259
Query: 191 SVATYNRLIRRLRL----EDAVGVFRGMTERDLSPDVVTYNTLISKFCK--LKEPDLEKA 244
+V TYN LI + E V R M+ER +S +VVTY +LI +CK L E + E
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLME-EAEHV 318
Query: 245 FEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNA 304
FE+ E K ++ D Y L+ C ++ +A + M+ GV N L+N
Sbjct: 319 FELLKE---KKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 305 YRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGM 364
Y GQ +A + M P H TYN ++ G C G +EAL + M
Sbjct: 376 YCKSGQLVEAEQIFSRMND--------WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Query: 365 PEIGLSPDAVSYCTVILGFCRI 386
+ + P ++Y ++ G+ RI
Sbjct: 428 CQKEVVPTVMTYNILLKGYSRI 449
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 132/315 (41%), Gaps = 26/315 (8%)
Query: 37 RGFTAVGNLQS--------ESKKVGGAFEL---LKAGTEKGVESNSVSGRRIR-EAEQVV 84
G+ VGNL+ E K + E+ L +G K N V+ I A +
Sbjct: 549 HGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLT 608
Query: 85 DETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXX 144
TY AL+ +C +D+A M E+G+ N+ + + L ++
Sbjct: 609 PTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLL 668
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG-----FSPSVATYNRLI 199
+ DL Y SL + ++E +++ P+ YN I
Sbjct: 669 LQKIVDFDLLLP--GYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAI 726
Query: 200 RRL----RLEDAVGVFRGMTERD-LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
L +LEDA +F + D PD TY LI C + D+ KAF ++ EM K
Sbjct: 727 AGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHG-CAIA-GDINKAFTLRDEMALK 784
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
GI+P+ TY LI+ LC + A L ++ + G++PN TY L++ G ++A
Sbjct: 785 GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEA 844
Query: 315 FHLQDEMTHKGFLPG 329
L+++M KG + G
Sbjct: 845 MRLKEKMIEKGLVRG 859
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 37/268 (13%)
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI---DSGFSPSVATYNRLIRRLRLED 206
Q+ PD + Y ++H+ + + + L E++ SGF + L+R
Sbjct: 97 QQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGF----VVWGELVR------ 146
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
VF+ E SP V ++ ++ + + + ++ A + M + G +P + L
Sbjct: 147 ---VFK---EFSFSPTV--FDMILKVYAE--KGLVKNALHVFDNMGNYGRIPSLLSCNSL 196
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
+ L + A ++ +M+ + VSP+ T + ++NAY G KA E
Sbjct: 197 LSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESS-- 254
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR- 385
G + VTYN++I G ++G E VLR M E G+S + V+Y ++I G+C+
Sbjct: 255 -----LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKK 309
Query: 386 --IREPGKAYEL----KVEVDENMISWL 407
+ E +EL K+ D++M L
Sbjct: 310 GLMEEAEHVFELLKEKKLVADQHMYGVL 337
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 170/381 (44%), Gaps = 35/381 (9%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
PN+I FT++ + + + AFE+L+ G + N T+
Sbjct: 285 PNLI--NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN----------------VYTHT 326
Query: 92 ALVLAYCCDERVDEAMGI-LRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQ 150
AL+ C ++A + L+ + KPN+ ++ +++ G C + ++ M +
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 386
Query: 151 KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN----RLIRRLRLED 206
+ L P+ TYT+LI+ C G G+A ++++ M D GF P++ TYN L ++ R +
Sbjct: 387 QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPE 446
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
A + L D VTY LI + C K+ D+ +A M G D L
Sbjct: 447 AYELLNKAFSCGLEADGVTYTILIQEQC--KQNDINQALAFFCRMNKTGFEADMRLNNIL 504
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
I C Q+++ E+ LF+ ++ G+ P ETYT +++ Y EG A M G
Sbjct: 505 IAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGC 564
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
+ P TY ++I GLC +EA + M + GLSP V+ T+ +C+
Sbjct: 565 V--------PDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 616
Query: 387 REPGKAYELKVEVDENMISWL 407
+ A L +D+ + W+
Sbjct: 617 NDSANAMILLEPLDKKL--WI 635
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 168/388 (43%), Gaps = 36/388 (9%)
Query: 35 IIRGFTAVGNLQSESKKVGGAFELLKAG-TEKGVESN-----SVSGRRIREAEQVVDE-- 86
++R F+ +G L ++ VG ++ G T + N +V I AE V DE
Sbjct: 153 MLRNFSEIGRL---NEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMS 209
Query: 87 -------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
+++Y +V+ D ++ EA L M +RG P+ + ++ LC G +
Sbjct: 210 VRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 269
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI 199
M P+ +TSLI C KG +A ++L EM+ +G+ P+V T+ LI
Sbjct: 270 RAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 329
Query: 200 ----RRLRLEDAVGVFRGMTERD-LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
+R E A +F + D P+V TY ++I +C KE L +A + + M +
Sbjct: 330 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC--KEDKLNRAEMLFSRMKEQ 387
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G+ P+ +TY LI C AY+L M G PN TY +++ + + +A
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ L ++ F G VTY +I C +AL M + G D
Sbjct: 448 YELLNK--------AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMR 499
Query: 375 SYCTVILGFCR---IREPGKAYELKVEV 399
+I FCR ++E + ++L V +
Sbjct: 500 LNNILIAAFCRQKKMKESERLFQLVVSL 527
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 126/311 (40%), Gaps = 48/311 (15%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAE 81
PNV +T + N ++ G A+EL+ ++G N + R EA
Sbjct: 391 PNV--NTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Query: 82 QVVDET---------TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+++++ TY L+ C +++A+ M + G + ++ N ++
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C + +M + L P + TYTS+I +C +G A K M G P
Sbjct: 509 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568
Query: 193 ATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK---------LKEP 239
TY LI ++ +++A ++ M +R LSP VT TL ++CK L EP
Sbjct: 569 FTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEP 628
Query: 240 DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT 299
L+K ++ T L+R LC ++++ A F+++L S + T
Sbjct: 629 -LDKKLWIR-------------TVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLA 674
Query: 300 GLMNAYRIEGQ 310
A G+
Sbjct: 675 AFTTACSESGK 685
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
L +A M +M ++G+ P + T ++ + A ++F EM GV P++ +Y
Sbjct: 163 LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 222
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
++ +G+ +A M +GF+P + T I+ LC G A+
Sbjct: 223 MVIGCFRDGKIQEADRWLTGMIQRGFIP--------DNATCTLILTALCENGLVNRAIWY 274
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
R M ++G P+ +++ ++I G C+ +A+E+ E+ N
Sbjct: 275 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 316
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 133/285 (46%), Gaps = 22/285 (7%)
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHL------ 166
M + ++ N++ FN+++ G C R M + PD T+T+++ +
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDA 546
Query: 167 FCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPD 222
FC P ++ M + S +A N +I L R+EDA F + E + PD
Sbjct: 547 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 606
Query: 223 VVTYNTLISKFCKLKEPD-LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYD 281
+VTYNT+I +C L+ D E+ FE+ ++ G P+ T LI LC + A
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFEL-LKVTPFG--PNTVTLTILIHVLCKNNDMDGAIR 663
Query: 282 LFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTY 341
+F M G PN TY LM+ + +F L +EM KG SPS V+Y
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI--------SPSIVSY 715
Query: 342 NAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
+ II GLC GR +EA + + L PD V+Y +I G+C++
Sbjct: 716 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 760
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 150/351 (42%), Gaps = 46/351 (13%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T+ L+ +C +D A + + M +RG++P+LI+++ ++ G G +
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
K + D ++S I ++ G A V M+ G SP+V TY LI+ L
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
R+ +A G++ + +R + P +VTY++LI FCK +L F + +M+ G PD
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG--NLRSGFALYEDMIKMGYPPDVVI 463
Query: 263 YEPLIRTL-----------------------------------CLQQRLSEAYDLFREML 287
Y L+ L C R EA +FR M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 288 RWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYG 347
+G+ P+ T+T +M +E F K H++ + + F S N +I+
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEDAFCK--HMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 348 LCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIR---EPGKAYEL 395
L R E+A + E + PD V+Y T+I G+C +R E + +EL
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 144/315 (45%), Gaps = 20/315 (6%)
Query: 101 ERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTY 160
++++ A +L + + G PN+++F ++ G C +G M M Q+ + PD Y
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 161 TSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTE 216
++LI + G G K+ S+ + G V ++ I + L A V++ M
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 217 RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRL 276
+ +SP+VVTY LI C ++ + +AF M +++ +G+ P TY LI C L
Sbjct: 385 QGISPNVVTYTILIKGLC--QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 277 SEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSP 336
+ L+ +M++ G P+ Y L++ +G A +M +
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ--------SIRL 494
Query: 337 SHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL------GFCRIREPG 390
+ V +N++I G C L R +EAL V R M G+ PD ++ TV+ FC+ +P
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT 554
Query: 391 KAYELKVEVDENMIS 405
+L + N IS
Sbjct: 555 IGLQLFDLMQRNKIS 569
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 154/360 (42%), Gaps = 32/360 (8%)
Query: 35 IIRGFTAVGNLQS------ESKKVGGAFELLKAGT-EKGVESNSVSGRRIREAEQVVDET 87
+I GF GNL+S + K+G +++ G G+ + +R + +++ ++
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 88 -----TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ------GLCGKG 136
+N+L+ +C R DEA+ + R M G+KP++ +F V++ C
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHM 551
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
+ M + ++ D +IHL A K + +I+ P + TYN
Sbjct: 552 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 197 RLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV 252
+I RL++A +F + P+ VT LI CK D++ A M + M
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK--NNDMDGAIRMFSIMA 669
Query: 253 HKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFS 312
KG P+A TY L+ + ++ LF EM G+SP+ +Y+ +++ G+
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 313 KAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
+A ++ + LP V Y +I G C +GR EA + M G+ PD
Sbjct: 730 EATNIFHQAIDAKLLPDVVA--------YAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 6/199 (3%)
Query: 101 ERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTY 160
R+++A + E ++P+++++N ++ G C R+ + P+ T
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 645
Query: 161 TSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTE 216
T LIH+ C A ++ S M + G P+ TY L+ + + +E + +F M E
Sbjct: 646 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 705
Query: 217 RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRL 276
+ +SP +V+Y+ +I CK D +A + + + +LPD Y LIR C RL
Sbjct: 706 KGISPSIVSYSIIIDGLCKRGRVD--EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 763
Query: 277 SEAYDLFREMLRWGVSPNN 295
EA L+ MLR GV P++
Sbjct: 764 VEAALLYEHMLRNGVKPDD 782
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 186 SGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF 245
SG S + L + + A+ R + ER +V+ N ++ L +E A
Sbjct: 215 SGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG---LSVDQIEVAS 271
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY 305
+ + ++ G P+ T+ LI C + + A+DLF+ M + G+ P+ Y+ L++ Y
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 306 RIEGQFSKAFHLQDEMTHKGFLPGFVT---------------------------GFSPSH 338
G L + HKG V G SP+
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
VTY +I GLC GR EA G+ + + G+ P V+Y ++I GFC+
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 142/316 (44%), Gaps = 17/316 (5%)
Query: 84 VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX 143
V +T TYN ++ C + A+ +L M+ G P++I++N V++ + G
Sbjct: 171 VPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIR 230
Query: 144 XXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI---- 199
Q P TYT L+ L C +A +VL +M G P + TYN L+
Sbjct: 231 FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNC 290
Query: 200 RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
RR LE+ V + + L + VTYNTL+ C + D + E+ M P
Sbjct: 291 RRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWD--EVEEILNIMYQTSYCPT 348
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
TY LI LC + LS A D F +ML P+ TY ++ A EG A L
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
+ + PG +TYN++I GL G ++AL + M + G+ PD ++ ++
Sbjct: 409 LLKNTCCPPGL--------ITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSL 460
Query: 380 ILGFCR---IREPGKA 392
I GFCR + E G+
Sbjct: 461 IYGFCRANLVEEAGQV 476
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 134/294 (45%), Gaps = 17/294 (5%)
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
LV YC R A+ +L M G P+++++N++V C +G + +
Sbjct: 253 LVCRYCGSAR---AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHG 309
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAV 208
L + TY +L+H C + + ++L+ M + + P+V TYN LI L L A+
Sbjct: 310 LELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAI 369
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIR 268
F M E+ PD+VTYNT++ K E ++ A E+ + + P TY +I
Sbjct: 370 DFFYQMLEQKCLPDIVTYNTVLGAMSK--EGMVDDAIELLGLLKNTCCPPGLITYNSVID 427
Query: 269 TLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
L + + +A +L+ +ML G+ P++ T L+ + +A + E +++G
Sbjct: 428 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG--- 484
Query: 329 GFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
G S TY +I GLC E A+ V+ M G PD Y ++ G
Sbjct: 485 ---NGIRGS--TYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 14/300 (4%)
Query: 85 DETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXX 144
++ T N ++ C + ++ +A ++ M P+ S + +V+GL ++
Sbjct: 102 NDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCI 161
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL-- 202
M PD TY +I C KGH A +L +M SG P V TYN +IR +
Sbjct: 162 LRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFD 221
Query: 203 --RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
E A+ ++ + P ++TY L+ C+ +A E+ +M +G PD
Sbjct: 222 YGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGS--ARAIEVLEDMAVEGCYPDI 279
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
TY L+ C + L E + + +L G+ N TY L+++ + + + +
Sbjct: 280 VTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNI 339
Query: 321 MTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
M + T + P+ +TYN +I GLC A+ M E PD V+Y TV+
Sbjct: 340 M--------YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 6/232 (2%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T TYN L+ + C E DE IL M + P +I++N ++ GLC +
Sbjct: 314 TVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFY 373
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR--- 203
M ++ PD TY +++ +G A ++L + ++ P + TYN +I L
Sbjct: 374 QMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKG 433
Query: 204 -LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
++ A+ ++ M + + PD +T +LI FC+ +E+A ++ E ++G T
Sbjct: 434 LMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANL--VEEAGQVLKETSNRGNGIRGST 491
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
Y +I+ LC ++ + A ++ ML G P+ YT ++ G S+A
Sbjct: 492 YRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
++ + + TYN ++ A + VD+A+ +L + P LI++N+V+ GL KG M
Sbjct: 378 QKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKK 437
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M + PD+ T SLI+ FC +A +VL E + G +TY +I+
Sbjct: 438 ALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQ 497
Query: 201 RL----RLEDAVGVFRGMTERDLSPDVVTYNTLI 230
L +E A+ V M PD Y ++
Sbjct: 498 GLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 160/387 (41%), Gaps = 71/387 (18%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGR-MXXXXXX 144
+ +Y +L+ A+ R EA+ + + M E G KP LI++N ++ G
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGH-PGKARKVLSEMIDSGFSPSVATYNRLI---- 199
M +APD TY +LI C +G +A +V EM +GFS TYN L+
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 200 RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+ R ++A+ V M SP +VTYN+LIS + + + L++A E+K +M KG PD
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR--DGMLDEAMELKNQMAEKGTKPD 383
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
TY L+ ++ A +F EM G PN T+ + Y G+F++ + D
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 320 EMTHKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCLLG 352
E+ G P VT GF P T+N +I G
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 353 RAEEALGVLRGMPEIGLSPD-----------------------------------AVSYC 377
E+A+ V R M + G++PD ++YC
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 378 TVILGFCRIREPGKAYELKVEVDENMI 404
+++ + +E G + L EV +I
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVI 590
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 173/407 (42%), Gaps = 58/407 (14%)
Query: 43 GNLQSESKKVGGAFELLKAG--TEKGVESNSV-----SGRRIREAEQVVDE--------- 86
G+L E+ +V FE +KA + V N++ R +EA +V++E
Sbjct: 292 GSLHQEAAQV---FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
TYN+L+ AY D +DEAM + M E+G KP++ ++ ++ G G++
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE- 205
M P+ T+ + I ++ ++G + K+ E+ G SP + T+N L+
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 206 ---DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
+ GVF+ M P+ T+NTLIS + + E+A + M+ G+ PD T
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS--FEQAMTVYRRMLDAGVTPDLST 526
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y ++ L ++ + EM PN TY L++AY + L +E+
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 323 HKGFLPGFV---------------------------TGFSPSHVTYNAIIYGLCLLGRAE 355
P V GFSP T N+++ + GR +
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV---SIYGRRQ 643
Query: 356 ---EALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
+A GVL M E G +P +Y +++ R + GK+ E+ E+
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 137/351 (39%), Gaps = 69/351 (19%)
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYT 161
RV A + + E G ++ S+ +++ GR M + P TY
Sbjct: 188 RVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYN 247
Query: 162 SLIHLFCDKGHP------------------------------------GKARKVLSEMID 185
++++F G P +A +V EM
Sbjct: 248 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 307
Query: 186 SGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
+GFS TYN L+ + R ++A+ V M SP +VTYN+LIS + ++ L
Sbjct: 308 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA--RDGML 365
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
++A E+K +M KG PD TY L+ ++ A +F EM G PN T+
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 425
Query: 302 MNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT---------------------------GF 334
+ Y G+F++ + DE+ G P VT GF
Sbjct: 426 IKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
P T+N +I G E+A+ V R M + G++PD +Y TV+ R
Sbjct: 486 VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 151/341 (44%), Gaps = 18/341 (5%)
Query: 58 LLKAGTEKGVESNSVSG--RRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTE 115
LL + G++S VSG + ++ A V E T+N L+ AY ++AM + R M +
Sbjct: 460 LLAVFGQNGMDS-EVSGVFKEMKRA-GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 116 RGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGK 175
G+ P+L ++N V+ L G M P+E TY SL+H + + G
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDVVTYNTLIS 231
+ E+ P L+ L +A F + ER SPD+ T N+++S
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
+ + + + KA + M +G P TY L+ ++ ++ RE+L G+
Sbjct: 638 IYGRRQM--VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
P+ +Y ++ AY + A + EM + G +P +T YN I
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT--------YNTFIGSYAAD 747
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKA 392
EEA+GV+R M + G P+ +Y +++ G+C++ +A
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 116/245 (47%), Gaps = 17/245 (6%)
Query: 148 MNQKDLAP--DERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M QKD D +I + +G A + + + + GFS V +Y LI
Sbjct: 162 MKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS 221
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
R +AV VF+ M E P ++TYN +++ F K+ P K + +M GI PDA
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP-WNKITSLVEKMKSDGIAPDAY 280
Query: 262 TYEPLIRTLCLQQRL-SEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
TY LI T C + L EA +F EM G S + TY L++ Y + +A + +E
Sbjct: 281 TYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 321 MTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
M + GFSPS VTYN++I G +EA+ + M E G PD +Y T++
Sbjct: 340 MV--------LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 381 LGFCR 385
GF R
Sbjct: 392 SGFER 396
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 38/336 (11%)
Query: 127 AVVQGLCGK-GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMID 185
A++ + GK GR+ + + + D +YTSLI F + G +A V +M +
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 186 SGFSPSVATYNRLIRRL-----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
G P++ TYN ++ + M ++PD TYNTLI+ C +
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT--CCKRGSL 294
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
++A ++ EM G D TY L+ R EA + EM+ G SP+ TY
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
L++AY +G +A L+++M K G P TY ++ G G+ E A+ +
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEK--------GTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE--------NMISWLGIWGL 412
M G P+ ++ I + GK E+ DE ++++W + +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYG---NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 413 F-EDTRKSLMQGLSNE----------DTFSSLMNDY 437
F ++ S + G+ E +TF++L++ Y
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TT N++V Y + V +A G+L M ERG P++ ++N+++
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR-- 203
+ K + PD +Y ++I+ +C A ++ SEM +SG P V TYN I
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 204 --LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF 245
E+A+GV R M + P+ TYN+++ +CKL D K F
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 181/412 (43%), Gaps = 48/412 (11%)
Query: 26 RNRLSPP----NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGR------ 75
+NR P N +I G+ + G K A+ LL+ KG + ++
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAG-------KFDEAYSLLERQRAKGSIPSVIAYNCILTCL 353
Query: 76 ----RIREAEQVVDET--------TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLI 123
++ EA +V +E +TYN L+ C ++D A + M + GL PN+
Sbjct: 354 RKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413
Query: 124 SFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM 183
+ N +V LC ++ M+ K PDE T+ SLI G A KV +M
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Query: 184 IDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP 239
+DS + Y LI+ R ED +++ M ++ SPD+ NT + K EP
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 240 DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT 299
EK M E+ + +PDA +Y LI L +E Y+LF M G + Y
Sbjct: 534 --EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591
Query: 300 GLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALG 359
+++ + G+ +KA+ L +EM K GF P+ VTY ++I GL + R +EA
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTK--------GFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE-----NMISW 406
+ + + V Y ++I GF ++ +AY + E+ + N+ +W
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 14/284 (4%)
Query: 116 RGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGK 175
R P+ S++ ++ GL G M ++ D R Y +I FC G K
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A ++L EM GF P+V TY +I L RL++A +F + + +VV Y++LI
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
F K+ D +A+ + E++ KG+ P+ T+ L+ L + ++EA F+ M
Sbjct: 666 GFGKVGRID--EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
+PN TY L+N +F+KAF EM + G PS ++Y +I GL
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ--------GMKPSTISYTTMISGLAKA 775
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
G EA + G PD+ Y +I G A+ L
Sbjct: 776 GNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 15/312 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+YN+L+L D IL M+ G P++ + +V G ++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
+ P YT+LI F H + +M + G+ P+V + LIR R+
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ A+ + M L D+V YN I F K+ + D+ A++ E+ G+ PD TY
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM--AWKFFHEIEANGLKPDEVTYT 277
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
+I LC RL EA ++F + + P Y ++ Y G+F +A+ L + K
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G + PS + YN I+ L +G+ +EAL V M + +P+ +Y +I C
Sbjct: 338 GSI--------PSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLC 388
Query: 385 RIREPGKAYELK 396
R + A+EL+
Sbjct: 389 RAGKLDTAFELR 400
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 142/310 (45%), Gaps = 24/310 (7%)
Query: 76 RIREAEQVVDE--TTTYNALVLAY--CCDE-----RVDEAMGILRCMTERGLKPNLISFN 126
R+ A ++DE +++ +A ++ Y C D +VD A + GLKP+ +++
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
+++ LC R+ + + P Y ++I + G +A +L
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 187 GFSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
G PSV YN ++ LR +++A+ VF M ++D +P++ TYN LI C+ + L+
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGK--LD 394
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
AFE++ M G+ P+ T ++ LC Q+L EA +F EM +P+ T+ L+
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
+ G+ A+ + ++M + + + Y ++I GR E+ + +
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLD--------SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 363 GMPEIGLSPD 372
M SPD
Sbjct: 507 DMINQNCSPD 516
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 6/247 (2%)
Query: 84 VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX 143
V +T YN ++ +C +V++A +L M +G +P ++++ +V+ GL R+
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 144 XXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL- 202
K + + Y+SLI F G +A +L E++ G +P++ T+N L+ L
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Query: 203 ---RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+ +A+ F+ M E +P+ VTY LI+ CK+++ KAF EM +G+ P
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK--FNKAFVFWQEMQKQGMKPS 761
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
+Y +I L ++EA LF G P++ Y ++ + AF L +
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Query: 320 EMTHKGF 326
E +G
Sbjct: 822 ETRRRGL 828
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 89/248 (35%), Gaps = 49/248 (19%)
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGM 214
+Y SL+ + + ++L EM +GF PSV T ++ + +L + V + M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
+ P Y TLI F + D+
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDM--------------------------------- 186
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
LF++M G P +T L+ + EG+ A L DEM +
Sbjct: 187 ----MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS--------SSL 234
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
V YN I +G+ + A + GL PD V+Y ++I C+ +A E
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 395 LKVEVDEN 402
+ +++N
Sbjct: 295 MFEHLEKN 302
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 149/322 (46%), Gaps = 17/322 (5%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX--XX 147
++AL+ AY +EA+ + M E GL+PNL+++NAV+ CGKG M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDE 329
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----R 203
M + + PD T+ SL+ + G AR + EM + V +YN L+ + +
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
++ A + M + + P+VV+Y+T+I F K D +A + EM + GI D +Y
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD--EALNLFGEMRYLGIALDRVSY 447
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
L+ R EA D+ REM G+ + TY L+ Y +G++ + + EM
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
+ LP +TY+ +I G G +EA+ + R GL D V Y +I
Sbjct: 508 EHVLPNL--------LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Query: 384 CRIREPGKAYELKVEVDENMIS 405
C+ G A L E+ + IS
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGIS 581
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 114/240 (47%), Gaps = 12/240 (5%)
Query: 70 NSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVV 129
+ ++ RRI + + +YN L+ A C ++D A IL M + + PN++S++ V+
Sbjct: 363 DEMTNRRIEQ------DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 130 QGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFS 189
G GR M +A D +Y +L+ ++ G +A +L EM G
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 190 PSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF 245
V TYN L+ ++ + ++ VF M + P+++TY+TLI + K ++A
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYS--KGGLYKEAM 534
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY 305
E+ E G+ D Y LI LC + A L EM + G+SPN TY +++A+
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 128/269 (47%), Gaps = 18/269 (6%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAM-GILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
V + T+N+L LA C + EA + MT R ++ ++ S+N ++ +C G+M
Sbjct: 335 VQPDRITFNSL-LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI-- 199
M K + P+ +Y+++I F G +A + EM G + +YN L+
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Query: 200 --RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL-KEPDLEKAFEMKAEMVHKGI 256
+ R E+A+ + R M + DVVTYN L+ + K K +++K F EM + +
Sbjct: 454 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF---TEMKREHV 510
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
LP+ TY LI EA ++FRE G+ + Y+ L++A G A
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAII 345
L DEMT + G SP+ VTYN+II
Sbjct: 571 LIDEMTKE--------GISPNVVTYNSII 591
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 126/314 (40%), Gaps = 43/314 (13%)
Query: 32 PNVI-----IRGFTAVG------NLQSESKKVGGAFE------LLKAGTEKGVESNSVSG 74
PNV+ I GF G NL E + +G A + LL T+ G ++
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 75 RRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCG 134
R + + + TYNAL+ Y + DE + M + PNL++++ ++ G
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 135 KGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
G L D Y++LI C G G A ++ EM G SP+V T
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 195 YNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTL---ISKFCKLKEPDLEKAFEMKAEM 251
YN +I DA G M D S D +L S L E + + ++ ++
Sbjct: 587 YNSII------DAFGRSATM---DRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQL 637
Query: 252 VHKGILPDADTYEPLIRTL--CLQ--QRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRI 307
T E RT C + Q LS ++FR+M + + PN T++ ++NA
Sbjct: 638 ----------TTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSR 687
Query: 308 EGQFSKAFHLQDEM 321
F A L +E+
Sbjct: 688 CNSFEDASMLLEEL 701
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 171/388 (44%), Gaps = 41/388 (10%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAEQ 82
N ++RG +G+L + + ++ +KG+ N+ + R EA +
Sbjct: 180 NALVRGLCMLGSLNQ-------SLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVK 232
Query: 83 VVDET---------TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC 133
++DE +YN L+ +C + R D+AM + R + +G K N++S+N +++ LC
Sbjct: 233 LLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLC 292
Query: 134 GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI--DSGFSPS 191
GR M+ D AP TY LI+ G +A +VL EM + F +
Sbjct: 293 CDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVT 352
Query: 192 VATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM 247
+YN +I RL +++ V M R P+ TYN I C+ +++AF +
Sbjct: 353 ATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCE-HNSKVQEAFYI 410
Query: 248 KAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRI 307
+ +K D Y+ +I +LC + A+ L EM R G P+ TY+ L+ +
Sbjct: 411 IQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCL 470
Query: 308 EGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEI 367
EG F+ A + M P+ +NA+I GLC + R + A+ V M E
Sbjct: 471 EGMFTGAMEVLSIMEES-------ENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEK 523
Query: 368 GLSPDAVSYCTVILGFCRIREPGKAYEL 395
P+ +Y ++ G E A E+
Sbjct: 524 KRMPNETTYAILVEGIAHEDELELAKEV 551
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 170/415 (40%), Gaps = 77/415 (18%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
++ + + Y LV C V AM ++ M + G N +++NA+V+GLC G +
Sbjct: 137 IIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSL 196
Query: 143 XXXXXMNQKDLAPDERTYTSLIHL-----------------------------------F 167
+ QK LAP+ TY+ L+ F
Sbjct: 197 QFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGF 256
Query: 168 CDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDV 223
C +G A + E+ GF +V +YN L+R L R E+A + M D +P V
Sbjct: 257 CKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSV 316
Query: 224 VTYNTLISKFCKLKEPDLEKAFEMKAEMV--HKGILPDADTYEPLIRTLCLQQRLSEAYD 281
VTYN LI+ E+A ++ EM + A +Y P+I LC + ++
Sbjct: 317 VTYNILINSLA--FHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVK 374
Query: 282 LFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK------GFLPGFVT--- 332
EM+ PN TY + + + +AF++ +++K F +T
Sbjct: 375 CLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLC 434
Query: 333 ------------------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEI-GLSPDA 373
GF P TY+A+I GLCL G A+ VL M E P
Sbjct: 435 RKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTV 494
Query: 374 VSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFEDTRKSLMQGLSNED 428
++ +ILG C+IR +L +EV E M+ + E T L++G+++ED
Sbjct: 495 DNFNAMILGLCKIRRT----DLAMEVFEMMVEKKRMPN--ETTYAILVEGIAHED 543
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 21/297 (7%)
Query: 100 DERVDE-----AMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLA 154
D R DE + L + G KPN+ ++ LC R+ M +
Sbjct: 79 DPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGII 138
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGV 210
PD YT L++ C +G+ G A +++ +M D G+ + TYN L+R L L ++
Sbjct: 139 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 198
Query: 211 FRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTL 270
+ ++ L+P+ TY+ L+ KE ++A ++ E++ KG P+ +Y L+
Sbjct: 199 VERLMQKGLAPNAFTYSFLLE--AAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGF 256
Query: 271 CLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGF 330
C + R +A LFRE+ G N +Y L+ +G++ +A L EM
Sbjct: 257 CKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGG------ 310
Query: 331 VTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIG--LSPDAVSYCTVILGFCR 385
+PS VTYN +I L GR E+AL VL+ M + A SY VI C+
Sbjct: 311 --DRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCK 365
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 12/288 (4%)
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ C R+ +A+ ++ M G+ P+ ++ +V LC +G + M
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE----DAV 208
+ TY +L+ C G ++ + + ++ G +P+ TY+ L+ E +AV
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIR 268
+ + + P++V+YN L++ FC KE + A + E+ KG + +Y L+R
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFC--KEGRTDDAMALFRELPAKGFKANVVSYNILLR 289
Query: 269 TLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
LC R EA L EM +P+ TY L+N+ G+ +A + EM+
Sbjct: 290 CLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNH-- 347
Query: 329 GFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
F + +YN +I LC G+ + + L M P+ +Y
Sbjct: 348 ----QFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 391
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 194/423 (45%), Gaps = 44/423 (10%)
Query: 10 LTRPNPMK-LLRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVE 68
+TR +P K LL L CLRN + P+ + F ++ E ++ A E+L+ T K V
Sbjct: 109 ITRDDPSKGLLILRDCLRNHGAFPSSLT--FCSLIYRFVEKGEMDNAIEVLEMMTNKNVN 166
Query: 69 --------SNSVSG--------------RRIREAEQVVDETTTYNALVLAYCCDERVDEA 106
S +SG ++ +V TY LV A C +VDE
Sbjct: 167 YPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEV 226
Query: 107 MGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHL 166
++R + + G + + + ++ + G G + M +K + D +Y+ LI
Sbjct: 227 RDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDG 286
Query: 167 FCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPD 222
+G+ +A +L +MI G P++ TY +IR L +LE+A +F + + D
Sbjct: 287 LSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVD 346
Query: 223 VVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDL 282
Y TLI C ++ +L +AF M +M +GI P TY +I LC+ R+SEA ++
Sbjct: 347 EFLYVTLIDGIC--RKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV 404
Query: 283 FREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYN 342
+ GV + TY+ L+++Y ++ + FL + V N
Sbjct: 405 SK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIR-----RRFLEAKI---PMDLVMCN 451
Query: 343 AIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
++ L+G EA + R MPE+ L+PD +Y T+I G+C+ + +A E+ E+ ++
Sbjct: 452 ILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKS 511
Query: 403 MIS 405
+S
Sbjct: 512 SVS 514
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 20/291 (6%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ +Y+ L+ + V+EA+G+L M + G++PNLI++ A+++GLC G++
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLF 335
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
+ + DE Y +LI C KG+ +A +L +M G PS+ TYN +I L
Sbjct: 336 NRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA 395
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
R+ +A V +G+ DV+TY+TL+ + K++ +++ E++ + I D
Sbjct: 396 GRVSEADEVSKGVV-----GDVITYSTLLDSYIKVQ--NIDAVLEIRRRFLEAKIPMDLV 448
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
L++ L EA L+R M ++P+ TY ++ Y GQ +A + +E+
Sbjct: 449 MCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
+ V YN II LC G + A VL + E GL D
Sbjct: 509 RKSSV---------SAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 159/386 (41%), Gaps = 49/386 (12%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
LLKA G + + R + +T TY ++ YC +++EA+ + + +
Sbjct: 453 LLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSS 512
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIH------------ 165
+ + +N ++ LC KG + + +K L D T +L+H
Sbjct: 513 VSAA-VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGIL 571
Query: 166 -----------------------LFCDKGHPGKARKVLSEMIDSGFSPSVAT--YNRLIR 200
L C +G A +V M G + + + L+
Sbjct: 572 GLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVD 631
Query: 201 RLRLEDAVGVFRGMTERDLSP-DVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
LR DA + E LS DV+ Y +I+ CK E L KA + + +G+ +
Sbjct: 632 NLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCK--EGFLVKALNLCSFAKSRGVTLN 689
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
TY LI LC Q L EA LF + G+ P+ TY L++ EG F A L D
Sbjct: 690 TITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLD 749
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
M KG +P + YN+I+ G C LG+ E+A+ V+ ++PDA + ++
Sbjct: 750 SMVSKGLVPNI--------IIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSM 801
Query: 380 ILGFCRIREPGKAYELKVEVDENMIS 405
I G+C+ + +A + E + IS
Sbjct: 802 IKGYCKKGDMEEALSVFTEFKDKNIS 827
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 132/306 (43%), Gaps = 18/306 (5%)
Query: 109 ILR-CMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAP--DERTYTSLIH 165
ILR C+ G P+ ++F +++ KG M M K++ D +++I
Sbjct: 120 ILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVIS 179
Query: 166 LFCDKGHPGKARKVLSEMIDSG-FSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLS 220
FC G P A +DSG P++ TY L+ L ++++ + R + +
Sbjct: 180 GFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFE 239
Query: 221 PDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAY 280
D V Y+ I + K L A EMV KG+ D +Y LI L + + EA
Sbjct: 240 FDCVFYSNWIHGY--FKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEAL 297
Query: 281 DLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVT 340
L +M++ GV PN TYT ++ G+ +AF L + + G
Sbjct: 298 GLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILS--------VGIEVDEFL 349
Query: 341 YNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD 400
Y +I G+C G A +L M + G+ P ++Y TVI G C +A E+ V
Sbjct: 350 YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVV 409
Query: 401 ENMISW 406
++I++
Sbjct: 410 GDVITY 415
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 23/264 (8%)
Query: 73 SGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+G + V+D T N L C + + +A+ + RG+ N I++N+++ GL
Sbjct: 645 AGETTLSSMDVIDYTIIINGL----CKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGL 700
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C +G + + L P E TY LI C +G A K+L M+ G P++
Sbjct: 701 CQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI 760
Query: 193 ATYNRLI----RRLRLEDAVGVF-RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM 247
YN ++ + + EDA+ V R M R ++PD T +++I +C K+ D+E+A +
Sbjct: 761 IIYNSIVDGYCKLGQTEDAMRVVSRKMMGR-VTPDAFTVSSMIKGYC--KKGDMEEALSV 817
Query: 248 KAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRI 307
E K I D + LI+ C + R+ EA L REML +E+ L+N R+
Sbjct: 818 FTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLV------SESVVKLIN--RV 869
Query: 308 EGQFSKAFHLQD---EMTHKGFLP 328
+ + +++ ++ E+ +G +P
Sbjct: 870 DAELAESESIRGFLVELCEQGRVP 893
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 156 DERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR----LEDAVGVF 211
D YT +I+ C +G KA + S G + + TYN LI L L +A+ +F
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 212 RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLC 271
+ L P VTY LI CK E A ++ MV KG++P+ Y ++ C
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCK--EGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC 771
Query: 272 LQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFV 331
+ +A + + V+P+ T + ++ Y +G +A + E K
Sbjct: 772 KLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDK------- 824
Query: 332 TGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGM 364
S + +I G C GR EEA G+LR M
Sbjct: 825 -NISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 103/224 (45%), Gaps = 17/224 (7%)
Query: 180 LSEMIDSGFSPSVATYNRLIRRL-RLED---AVGVFRGMTERDLSPDVVTYNTLISKFCK 235
L ++ SGFSP++ + +R +R L RL+ + + + + ++ + Y+ + F
Sbjct: 14 LQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLN 73
Query: 236 LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCL-QQRLSEAYDLFREMLR-WGVSP 293
L + + F + + I P + LI + + S+ + R+ LR G P
Sbjct: 74 LNRYEDAEKF-INIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFP 132
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
++ T+ L+ + +G+ A + + MT+K + + +A+I G C +G+
Sbjct: 133 SSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKN------VNYPFDNFVCSAVISGFCKIGK 186
Query: 354 AEEALGVLRGMPEIG-LSPDAVSYCTVILGFCRIREPGKAYELK 396
E ALG + G L P+ V+Y T++ C++ GK E++
Sbjct: 187 PELALGFFESAVDSGVLVPNLVTYTTLVSALCQL---GKVDEVR 227
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 23/270 (8%)
Query: 38 GFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAY 97
F + ++ +SK+V A+EL +A + GR +T TYN ++ +
Sbjct: 163 SFNTILDVLCKSKRVEKAYELFRA----------LRGR-------FSVDTVTYNVILNGW 205
Query: 98 CCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDE 157
C +R +A+ +L+ M ERG+ PNL ++N +++G G++ M ++D D
Sbjct: 206 CLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV 265
Query: 158 RTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRG 213
TYT+++H F G +AR V EMI G PSVATYN +I+ L +E+AV +F
Sbjct: 266 VTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEE 325
Query: 214 MTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQ 273
M R P+V TYN LI E + E+ M ++G P+ TY +IR
Sbjct: 326 MVRRGYEPNVTTYNVLIRGLFHAGE--FSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC 383
Query: 274 QRLSEAYDLFREMLRWGVSPNNETYTGLMN 303
+ +A LF +M PN +TY L++
Sbjct: 384 SEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 143/304 (47%), Gaps = 16/304 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T+ + Y + D+A+ + M E G +L SFN ++ LC R+ +
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
+ + D TY +++ +C KA +VL EM++ G +P++ TYN +++ ++
Sbjct: 188 RGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
A F M +RD DVVTY T++ F E +++A + EM+ +G+LP TY
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE--IKRARNVFDEMIREGVLPSVATYN 304
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
+I+ LC + + A +F EM+R G PN TY L+ G+FS+ L M ++
Sbjct: 305 AMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE 364
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG-F 383
G P F TYN +I E+ALG+ M P+ +Y +I G F
Sbjct: 365 GCEPNF--------QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Query: 384 CRIR 387
R R
Sbjct: 417 VRKR 420
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 121/252 (48%), Gaps = 15/252 (5%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----R 203
M + P +T+ + + G P KA K+ M + G +A++N ++ L R
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
+E A +FR + R S D VTYN +++ +C +K KA E+ EMV +GI P+ TY
Sbjct: 177 VEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRT--PKALEVLKEMVERGINPNLTTY 233
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
+++ ++ A++ F EM + + TYT +++ + + G+ +A ++ DEM
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
+G LP S TYNA+I LC E A+ + M G P+ +Y +I G
Sbjct: 294 EGVLP--------SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 384 CRIREPGKAYEL 395
E + EL
Sbjct: 346 FHAGEFSRGEEL 357
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 47/202 (23%)
Query: 201 RLRLEDAV-GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
RL L V + M + P T+ + ++ +PD KA ++ M G D
Sbjct: 103 RLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPD--KAVKLFLNMHEHGCFQD 160
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
++ ++ LC +R+ +AY+LFR + G+FS
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELFRAL---------------------RGRFS------- 192
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
VTYN I+ G CL+ R +AL VL+ M E G++P+ +Y T+
Sbjct: 193 ----------------VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 380 ILGFCRIREPGKAYELKVEVDE 401
+ GF R + A+E +E+ +
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKK 258
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 155/364 (42%), Gaps = 50/364 (13%)
Query: 76 RIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
R E + + ++N+++ YC VD A + + GL P++ S N ++ GLC
Sbjct: 211 RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 270
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
G + MN+ + PD TY L F G A +V+ +M+D G SP V TY
Sbjct: 271 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 330
Query: 196 NRLI----------------------------------------RRLRLEDAVGVFRGMT 215
L+ + R+++A+ +F M
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Query: 216 ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQR 275
LSPD+V Y+ +I CKL + D+ A + EM K ILP++ T+ L+ LC +
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDM--ALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 276 LSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFS 335
L EA L ++ G + + Y +++ Y G +A L F TG +
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL--------FKVVIETGIT 500
Query: 336 PSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
PS T+N++IYG C EA +L + GL+P VSY T++ + EL
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 396 KVEV 399
+ E+
Sbjct: 561 RREM 564
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 162/378 (42%), Gaps = 78/378 (20%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
P+VI G Q + +G LLK +G E NS+ +
Sbjct: 325 PDVITYTILLCGQCQLGNIDMG--LVLLKDMLSRGFELNSI---------------IPCS 367
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
++ C R+DEA+ + M GL P+L++++ V+ GLC G+ M K
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDA 207
+ P+ RT+ +L+ C KG +AR +L +I SG + + YN +I + +E+A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ +F+ + E ++P V T+N+LI +CK
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCK-------------------------------- 515
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
Q ++EA + + +G++P+ +YT LM+AY G L+ EM +G +
Sbjct: 516 -----TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG-I 569
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV------------LRGMPEIGLSPDAVS 375
P P++VTY+ I GLC + E V LR M G+ PD ++
Sbjct: 570 P-------PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 376 YCTVILGFCRIREPGKAY 393
Y T+I CR++ A+
Sbjct: 623 YNTIIQYLCRVKHLSGAF 640
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 154/339 (45%), Gaps = 34/339 (10%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY+ +V C +++++A+ LR + + P+++SFN+++ G C G + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRL---- 204
+ L P ++ LI+ C G +A ++ S+M G P TYN L + L
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI-LPDADTY 263
A V R M ++ LSPDV+TY L+ C+L D+ + +M+ +G L
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM--GLVLLKDMLSRGFELNSIIPC 366
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
++ LC R+ EA LF +M G+SP+ Y+ +++ G+F A L DEM
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 324 KGFLPG---------------------------FVTGFSPSHVTYNAIIYGLCLLGRAEE 356
K LP +G + V YN +I G G EE
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 357 ALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
AL + + + E G++P ++ ++I G+C+ + +A ++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 33/267 (12%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDA 207
M ++L ++Y S+++ F + K V E+ D + L R+ +LEDA
Sbjct: 150 MKDQNLNVSTQSYNSVLYHFRE---TDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDA 206
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
V R +D+ P VV++N+++S +CKL D+ K+F ++ G++P ++ LI
Sbjct: 207 VLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF--FCTVLKCGLVPSVYSHNILI 264
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
LCL ++EA +L +M + GV P++ TY L + + G S A+ + +M KG
Sbjct: 265 NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS 324
Query: 328 PGFVT---------------------------GFS-PSHVTYNAIIYGLCLLGRAEEALG 359
P +T GF S + + ++ GLC GR +EAL
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCRI 386
+ M GLSPD V+Y VI G C++
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKL 411
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%)
Query: 74 GRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC 133
G R E+E + + TYN ++ C + + A L M R L + ++N ++ LC
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 134 GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVA 193
G + + +++++ + YT+LI C KG P A K+ +++ GF+ S+
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726
Query: 194 TYNRLIRRLRLEDAVGVFRGMT 215
Y+ +I RL + F G +
Sbjct: 727 DYSAVINRLCRRHLMNCFPGQS 748
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 125/252 (49%), Gaps = 14/252 (5%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----R 203
M Q + D T+++ C G+ A+ + +EM + G P+V TYN +I R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
DA + R M E+ ++PD+VT++ LI+ F +KE + +A E+ EM+ I P TY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAF--VKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
+I C Q R+ +A + M G SP+ T++ L+N Y + + EM
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
+G + + VTY +I+G C +G + A +L M G++PD +++ ++ G
Sbjct: 179 RGIVA--------NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
Query: 384 CRIREPGKAYEL 395
C +E KA+ +
Sbjct: 231 CSKKELRKAFAI 242
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 120/245 (48%), Gaps = 18/245 (7%)
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
A+V C D A + M E+G+ PN++++N ++ C GR M +K
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDA 207
+ PD T+++LI+ F + +A ++ EM+ P+ TYN +I ++ R++DA
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ M + SPDVVT++TLI+ +CK K D E+ EM +GI+ + TY LI
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD--NGMEIFCEMHRRGIVANTVTYTTLI 192
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF------------ 315
C L A DL EM+ GV+P+ T+ ++ + + KAF
Sbjct: 193 HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDH 252
Query: 316 HLQDE 320
HL+DE
Sbjct: 253 HLEDE 257
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 14/258 (5%)
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGH 172
M + +K +++ A+V LC G M++K + P+ TY +I FC G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 173 PGKARKVLSEMIDSGFSPSVATY----NRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNT 228
A ++L MI+ +P + T+ N ++ ++ +A +++ M + P +TYN+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 229 LISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
+I FCK + ++ A M M KG PD T+ LI C +R+ ++F EM R
Sbjct: 121 MIDGFCK--QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGL 348
G+ N TYT L++ + G A L +EM G +P ++T++ ++ GL
Sbjct: 179 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM--------ISCGVAPDYITFHCMLAGL 230
Query: 349 CLLGRAEEALGVLRGMPE 366
C +A +L + +
Sbjct: 231 CSKKELRKAFAILEDLQK 248
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 109/204 (53%), Gaps = 6/204 (2%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN ++ ++C R +A +LR M E+ + P++++F+A++ + ++ M
Sbjct: 47 TYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM 106
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
+ + P TY S+I FC + A+++L M G SP V T++ LI + R+
Sbjct: 107 LRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 166
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
++ + +F M R + + VTY TLI FC++ DL+ A ++ EM+ G+ PD T+
Sbjct: 167 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV--GDLDAAQDLLNEMISCGVAPDYITFH 224
Query: 265 PLIRTLCLQQRLSEAYDLFREMLR 288
++ LC ++ L +A+ + ++ +
Sbjct: 225 CMLAGLCSKKELRKAFAILEDLQK 248
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAE 81
PNV+ + + + S + A +LL+ EK + + V+ R++ EAE
Sbjct: 43 PNVLT--YNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAE 100
Query: 82 QVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
++ E T TYN+++ +C +RVD+A +L M +G P++++F+ ++ G
Sbjct: 101 EIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGY 160
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
C R+ M+++ + + TYT+LIH FC G A+ +L+EMI G +P
Sbjct: 161 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY 220
Query: 193 ATYNRLIRRL 202
T++ ++ L
Sbjct: 221 ITFHCMLAGL 230
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 155/364 (42%), Gaps = 50/364 (13%)
Query: 76 RIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
R E + + ++N+++ YC VD A + + GL P++ S N ++ GLC
Sbjct: 211 RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 270
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
G + MN+ + PD TY L F G A +V+ +M+D G SP V TY
Sbjct: 271 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 330
Query: 196 NRLI----------------------------------------RRLRLEDAVGVFRGMT 215
L+ + R+++A+ +F M
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Query: 216 ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQR 275
LSPD+V Y+ +I CKL + D+ A + EM K ILP++ T+ L+ LC +
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDM--ALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 276 LSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFS 335
L EA L ++ G + + Y +++ Y G +A L F TG +
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL--------FKVVIETGIT 500
Query: 336 PSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
PS T+N++IYG C EA +L + GL+P VSY T++ + EL
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 396 KVEV 399
+ E+
Sbjct: 561 RREM 564
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 162/378 (42%), Gaps = 78/378 (20%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
P+VI G Q + +G LLK +G E NS+ +
Sbjct: 325 PDVITYTILLCGQCQLGNIDMG--LVLLKDMLSRGFELNSI---------------IPCS 367
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
++ C R+DEA+ + M GL P+L++++ V+ GLC G+ M K
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDA 207
+ P+ RT+ +L+ C KG +AR +L +I SG + + YN +I + +E+A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ +F+ + E ++P V T+N+LI +CK
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCK-------------------------------- 515
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
Q ++EA + + +G++P+ +YT LM+AY G L+ EM +G +
Sbjct: 516 -----TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG-I 569
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV------------LRGMPEIGLSPDAVS 375
P P++VTY+ I GLC + E V LR M G+ PD ++
Sbjct: 570 P-------PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 376 YCTVILGFCRIREPGKAY 393
Y T+I CR++ A+
Sbjct: 623 YNTIIQYLCRVKHLSGAF 640
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 152/336 (45%), Gaps = 34/336 (10%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY+ +V C +++++A+ LR + + P+++SFN+++ G C G + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRL---- 204
+ L P ++ LI+ C G +A ++ S+M G P TYN L + L
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI-LPDADTY 263
A V R M ++ LSPDV+TY L+ C+L D+ + +M+ +G L
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM--GLVLLKDMLSRGFELNSIIPC 366
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
++ LC R+ EA LF +M G+SP+ Y+ +++ G+F A L DEM
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 324 KGFLPG---------------------------FVTGFSPSHVTYNAIIYGLCLLGRAEE 356
K LP +G + V YN +I G G EE
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 357 ALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKA 392
AL + + + E G++P ++ ++I G+C+ + +A
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 33/267 (12%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDA 207
M ++L ++Y S+++ F K V E+ D + L R+ +LEDA
Sbjct: 150 MKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDA 206
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
V R +D+ P VV++N+++S +CKL D+ K+F ++ G++P ++ LI
Sbjct: 207 VLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF--FCTVLKCGLVPSVYSHNILI 264
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
LCL ++EA +L +M + GV P++ TY L + + G S A+ + +M KG
Sbjct: 265 NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS 324
Query: 328 PGFVT---------------------------GFS-PSHVTYNAIIYGLCLLGRAEEALG 359
P +T GF S + + ++ GLC GR +EAL
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCRI 386
+ M GLSPD V+Y VI G C++
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKL 411
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%)
Query: 74 GRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC 133
G R E+E + + TYN ++ C + + A L M R L + ++N ++ LC
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 134 GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVA 193
G + + +++++ + YT+LI C KG P A K+ +++ GF+ S+
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726
Query: 194 TYNRLIRRLRLEDAVGVFRGMT 215
Y+ +I RL + F G +
Sbjct: 727 DYSAVINRLCRRHLMNCFPGQS 748
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 153/324 (47%), Gaps = 14/324 (4%)
Query: 76 RIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
++ + + VV TY L+ + ++ +A + M ERG++ ++ + +++ C K
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
G M + +K L+P TY +LI C G G A +++EM G + + +
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 196 NRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM 251
N LI R+ +++A ++ M ++ DV T NT+ S F +LK D K + + M
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR--M 460
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
+ G+ +Y LI C + + EA LF EM GV PN TY ++ AY +G+
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 312 SKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
+A L+ M G P TY ++I+G C+ +EA+ + M GL
Sbjct: 521 KEARKLRANME--------ANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQ 572
Query: 372 DAVSYCTVILGFCRIREPGKAYEL 395
++V+Y +I G + + +A+ L
Sbjct: 573 NSVTYTVMISGLSKAGKSDEAFGL 596
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 166/393 (42%), Gaps = 47/393 (11%)
Query: 24 CLRNRLSPPNVIIRGFTAVG------------NLQSESKKVGGAFELLKAGTEKGVESN- 70
C R + +I+ F+ G N + + G +LK + GV N
Sbjct: 235 CRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNK 294
Query: 71 ---------SVSGRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRC 112
SV ++ +AE++ DE Y +L+ C + A +
Sbjct: 295 VTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDE 354
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGH 172
+TE+GL P+ ++ A++ G+C G M M K + + + +LI +C KG
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRL---IRRLRLEDAVG--VFRGMTERDLSPDVVTYN 227
+A + M GF V T N + RL+ D +FR M E + V+Y
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR-MMEGGVKLSTVSYT 473
Query: 228 TLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREML 287
LI +CK E ++E+A + EM KG+ P+A TY +I C Q ++ EA L M
Sbjct: 474 NLIDVYCK--EGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANME 531
Query: 288 RWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYG 347
G+ P++ TYT L++ I +A L EM KG + VTY +I G
Sbjct: 532 ANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL--------DQNSVTYTVMISG 583
Query: 348 LCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
L G+++EA G+ M G + D Y +I
Sbjct: 584 LSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 157/348 (45%), Gaps = 28/348 (8%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
E TYN ++ AY G+L+ M + G+ N +++ +++ G+M
Sbjct: 258 EAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLF 317
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M ++ + D YTSLI C KG+ +A + E+ + G SPS TY LI +
Sbjct: 318 DEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKV 377
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+ A + M + ++ V +NTLI +C ++ +++A + M KG D
Sbjct: 378 GEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC--RKGMVDEASMIYDVMEQKGFQADVF 435
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
T + +R EA M+ GV + +YT L++ Y EG +A L EM
Sbjct: 436 TCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM 495
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+ K G P+ +TYN +IY C G+ +EA + M G+ PD+ +Y ++I
Sbjct: 496 SSK--------GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIH 547
Query: 382 GFCRIREPGKAYELKVEVDENM--ISWLGIWGLFED--TRKSLMQGLS 425
G C + VDE M S +G+ GL ++ T ++ GLS
Sbjct: 548 GEC----------IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLS 585
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 33/332 (9%)
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYT 161
R+D + I R M + G+K + S VV+GLC +G + + K + P+ TY
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263
Query: 162 SLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL----IRRLRLEDAVGVFRGMTER 217
++I+ + + VL M G + TY L ++ ++ DA +F M ER
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
+ DV Y +LIS C ++ ++++AF + E+ KG+ P + TY LI +C +
Sbjct: 324 GIESDVHVYTSLISWNC--RKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT----- 332
A L EM GV+ + L++ Y +G +A + D M KGF T
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIA 441
Query: 333 ----------------------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
G S V+Y +I C G EEA + M G+
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQ 501
Query: 371 PDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
P+A++Y +I +C+ + +A +L+ ++ N
Sbjct: 502 PNAITYNVMIYAYCKQGKIKEARKLRANMEAN 533
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 6/221 (2%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
+N L+ YC VDEA I M ++G + ++ + N + R
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLR 203
M + + +YT+LI ++C +G+ +A+++ EM G P+ TYN +I ++ +
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
+++A + M + PD TY +LI C ++++A + +EM KG+ ++ TY
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECI--ADNVDEAMRLFSEMGLKGLDQNSVTY 577
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNA 304
+I L + EA+ L+ EM R G + +N+ YT L+ +
Sbjct: 578 TVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 14/234 (5%)
Query: 163 LIHLFCDKGHPGKARKVLSEMIDSGFS----PSVATYNRLIRRLRLEDAVGVFRGMTERD 218
+ ++ D G + +V M+ G S + +R R++ + +FR M +
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 219 LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE 278
+ V + ++ C+ E +EK+ ++ E KGI P+A TY +I Q+ S
Sbjct: 220 VKITVYSLTIVVEGLCRRGE--VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSH 338
+ + M + GV N TYT LM G+ S A L DEM +G S H
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIE-------SDVH 330
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKA 392
V Y ++I C G + A + + E GLSP + +Y +I G C++ E G A
Sbjct: 331 V-YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 150/343 (43%), Gaps = 26/343 (7%)
Query: 72 VSGRRIREAEQVVDE-------TTTYNALVLA--YCCDERVDEAMGILRCMTERGLKPNL 122
V RR+ +A +V DE Y+ +L C + +V+ ++ +G PN+
Sbjct: 181 VKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNI 240
Query: 123 ISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSE 182
+ +N ++ G C G + + K P T+ ++I+ FC +G + ++LSE
Sbjct: 241 VFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE 300
Query: 183 MIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE 238
+ + G SV N +I R D + D PDV TYN LI++ C KE
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLC--KE 358
Query: 239 PDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETY 298
E A E KG++P+ +Y PLI+ C + A L +M G P+ TY
Sbjct: 359 GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Query: 299 TGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEAL 358
L++ + G A +++ ++ + G SP YN ++ GLC GR A
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDR--------GVSPDAAIYNMLMSGLCKTGRFLPAK 470
Query: 359 GVLRGMPEIGLSPDAVSYCTVILGFCR---IREPGKAYELKVE 398
+ M + + PDA Y T+I GF R E K + L VE
Sbjct: 471 LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE 513
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 144/347 (41%), Gaps = 48/347 (13%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TY L+ +D+A+ + + +RG+ P+ +N ++ GLC GR
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RR 201
M +++ PD Y +LI F G +ARKV S ++ G V +N +I R
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
L++A+ M E L PD TY+T+I + +K+ D+ A ++ M P+
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGY--VKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQ-FSKAFH---- 316
TY LI C Q A + F+EM + PN TYT L+ + E KA +
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWEL 651
Query: 317 ------LQDEMTHKGFLPGFVT-------------------------------GFSPSHV 339
+ +E+T L GFV G+S
Sbjct: 652 MMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAA 711
Query: 340 TYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
YN+ + LC+ G + A M + G SPD VS+ ++ GFC +
Sbjct: 712 AYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVV 758
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 136/308 (44%), Gaps = 15/308 (4%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
++ +Y L+ AYC + D A +L M ERG KP+++++ ++ GL G M
Sbjct: 376 LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV 435
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL---- 198
+ + ++PD Y L+ C G A+ + SEM+D P Y L
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Query: 199 IRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
IR ++A VF E+ + DVV +N +I FC + L++A M + ++P
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC--RSGMLDEALACMNRMNEEHLVP 553
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
D TY +I QQ ++ A +FR M + PN TYT L+N + +G F A
Sbjct: 554 DKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETF 613
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRA-EEALGVLRGMPEIGLSPDAVSYC 377
EM + +P VTY +I L E+A+ M P+ V++
Sbjct: 614 KEMQLRDLVPNV--------VTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFN 665
Query: 378 TVILGFCR 385
++ GF +
Sbjct: 666 CLLQGFVK 673
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 133/299 (44%), Gaps = 14/299 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TYN L+ C + + + A+G L +++GL PN +S+ ++Q C
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M ++ PD TY LIH GH A + ++ID G SP A YN L+ L
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
R A +F M +R++ PD Y TLI F ++ D ++A ++ + V KG+ D
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGF--IRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+ +I+ C L EA M + P+ TY+ +++ Y + + A + M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
P+ VTY ++I G C G + A + M L P+ V+Y T+I
Sbjct: 582 EK--------NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 14/270 (5%)
Query: 119 KPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARK 178
KP++ ++N ++ LC +G+ ++K L P+ +Y LI +C A K
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 179 VLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFC 234
+L +M + G P + TY LI L ++DAV + + +R +SPD YN L+S C
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 235 KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
K A + +EM+ + ILPDA Y LI EA +F + GV +
Sbjct: 462 KTGR--FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRA 354
+ ++ + G +A + M + + P TY+ II G
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV--------PDKFTYSTIIDGYVKQQDM 571
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
A+ + R M + P+ V+Y ++I GFC
Sbjct: 572 ATAIKIFRYMEKNKCKPNVVTYTSLINGFC 601
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 27/293 (9%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
++ + Y L+ + DEA + E+G+K +++ NA+++G C G +
Sbjct: 480 NILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
MN++ L PD+ TY+++I + + A K+ M + P+V TY LI
Sbjct: 540 LACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLING 599
Query: 202 L----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
+ A F+ M RDL P+VVTY TLI K + LEKA M+ +
Sbjct: 600 FCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK-ESSTLEKAVYYWELMMTNKCV 658
Query: 258 PDADTYEPLIRTLCLQ---QRLSEA-----------YDLFREMLRWGVSPNNETYTGLMN 303
P+ T+ L++ + + L+E + F M G S + Y +
Sbjct: 659 PNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALV 718
Query: 304 AYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEE 356
+ G A QD+M KGF SP V++ AI++G C++G +++
Sbjct: 719 CLCVHGMVKTACMFQDKMVKKGF--------SPDPVSFAAILHGFCVVGNSKQ 763
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 14/254 (5%)
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVF 211
D PD SL+ L G ARKV EM D G S + L++ + E V V
Sbjct: 165 DSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVG 224
Query: 212 RGMTE----RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
R + E + P++V YNT+I +CKL D+E A+ + E+ KG +P +T+ +I
Sbjct: 225 RKLIEGRWGKGCIPNIVFYNTIIGGYCKLG--DIENAYLVFKELKLKGFMPTLETFGTMI 282
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
C + + L E+ G+ + +++A G + D G++
Sbjct: 283 NGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG------YKVDPAESIGWI 336
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIR 387
P TYN +I LC G+ E A+G L + GL P+ +SY +I +C+ +
Sbjct: 337 --IANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK 394
Query: 388 EPGKAYELKVEVDE 401
E A +L +++ E
Sbjct: 395 EYDIASKLLLQMAE 408
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 140/305 (45%), Gaps = 13/305 (4%)
Query: 76 RIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
R++ E+ V TYN L+ YC +++ A ++ M E +KPN+++ N +V G+C
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
+ M ++ + + TY +LIH C + KA +M+++G SP Y
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 196 NRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM 251
LI L R DA+ V + E S D++ YN LI FC + + EK +EM +M
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC--DKNNAEKVYEMLTDM 572
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
+G PD+ TY LI + + +M G+ P TY +++AY G+
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 312 SKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
+A L +M G + +P+ V YN +I LG +AL + M + P
Sbjct: 633 DEALKLFKDM-------GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685
Query: 372 DAVSY 376
+ +Y
Sbjct: 686 NVETY 690
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 141/321 (43%), Gaps = 21/321 (6%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCM----TERG--LKPNLISFNAVVQGLCGKGRMX 139
+ T L+ C RVDEA+ + M T+ G +K + I FN ++ GLC GR+
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 140 XXXXXXXXMN-QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M ++ P+ TY LI +C G A++V+S M + P+V T N +
Sbjct: 388 EAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTI 447
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
+ R L AV F M + + +VVTY TLI C + ++EKA +M+
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS--NVEKAMYWYEKMLEA 505
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G PDA Y LI LC +R +A + ++ G S + Y L+ + + K
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ + +M +G P +TYN +I E ++ M E GL P
Sbjct: 566 YEMLTDMEKEGK--------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 375 SYCTVILGFCRIREPGKAYEL 395
+Y VI +C + E +A +L
Sbjct: 618 TYGAVIDAYCSVGELDEALKL 638
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 108/259 (41%), Gaps = 7/259 (2%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E E V TY L+ A C V++AM M E G P+ + A++ GLC R
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
+ + + D Y LI LFCDK + K ++L++M G P TYN L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM-VH 253
I + E + M E L P V TY +I +C + E L++A ++ +M +H
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE--LDEALKLFKDMGLH 645
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK 313
+ P+ Y LI +A L EM V PN ETY L + Q
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGET 705
Query: 314 AFHLQDEMTHKGFLPGFVT 332
L DEM + P +T
Sbjct: 706 LLKLMDEMVEQSCEPNQIT 724
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 154/393 (39%), Gaps = 76/393 (19%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS--------------------- 124
E +NAL+ + + ++ M E ++P++++
Sbjct: 293 EAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVF 352
Query: 125 --------------------FNAVVQGLCGKGRMXXXXXXXXXMN-QKDLAPDERTYTSL 163
FN ++ GLC GR+ M ++ P+ TY L
Sbjct: 353 EQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCL 412
Query: 164 IHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDL 219
I +C G A++V+S M + P+V T N ++ R L AV F M + +
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 220 SPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEA 279
+VVTY TLI C + ++EKA +M+ G PDA Y LI LC +R +A
Sbjct: 473 KGNVVTYMTLIHACCSVS--NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 280 YDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT------- 332
+ ++ G S + Y L+ + + K + + +M +G P +T
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 333 --------------------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMP-EIGLSP 371
G P+ TY A+I C +G +EAL + + M ++P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 372 DAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
+ V Y +I F ++ G+A LK E+ M+
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 146/352 (41%), Gaps = 32/352 (9%)
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
+ + C + R + A IL + + FNA++ L + M++
Sbjct: 265 FISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK 324
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEM----IDSG--FSPSVATYNRLIRRL---- 202
+ PD T LI+ C +A +V +M D G +N LI L
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 203 RLEDAVGVF-RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
RL++A + R E P+ VTYN LI +C+ + LE A E+ + M I P+
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGK--LETAKEVVSRMKEDEIKPNVV 442
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
T ++ +C L+ A F +M + GV N TY L++A KA + ++M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
G SP Y A+I GLC + R +A+ V+ + E G S D ++Y +I
Sbjct: 503 LE--------AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 382 GFCRIREPGKAYELKVEVDE-----------NMISWLGIWGLFEDTRKSLMQ 422
FC K YE+ ++++ +IS+ G FE + + Q
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 20/272 (7%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ Y AL+ C R +A+ ++ + E G +L+++N ++ C K
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M ++ PD TY +LI F +++ +M + G P+V TY +I
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSV 629
Query: 203 -RLEDAVGVFRGM-TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
L++A+ +F+ M ++P+ V YN LI+ F KL + +A +K EM K + P+
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG--NFGQALSLKEEMKMKMVRPNV 687
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
+TY L + L + + L EM+ PN T LM R+ G DE
Sbjct: 688 ETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME--RLSG--------SDE 737
Query: 321 MTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
+ L F+ G+S + T A + + LG
Sbjct: 738 LVK---LRKFMQGYSVASPTEKASPFDVFSLG 766
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 2/152 (1%)
Query: 62 GTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCM-TERGLKP 120
G K ES ++RE + + TTY A++ AYC +DEA+ + + M + P
Sbjct: 592 GKHKDFESVERMMEQMRE-DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 121 NLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVL 180
N + +N ++ G M K + P+ TY +L +K K++
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLM 710
Query: 181 SEMIDSGFSPSVATYNRLIRRLRLEDAVGVFR 212
EM++ P+ T L+ RL D + R
Sbjct: 711 DEMVEQSCEPNQITMEILMERLSGSDELVKLR 742
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 140/305 (45%), Gaps = 13/305 (4%)
Query: 76 RIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
R++ E+ V TYN L+ YC +++ A ++ M E +KPN+++ N +V G+C
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
+ M ++ + + TY +LIH C + KA +M+++G SP Y
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 196 NRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM 251
LI L R DA+ V + E S D++ YN LI FC + + EK +EM +M
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC--DKNNAEKVYEMLTDM 572
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
+G PD+ TY LI + + +M G+ P TY +++AY G+
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 312 SKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
+A L +M G + +P+ V YN +I LG +AL + M + P
Sbjct: 633 DEALKLFKDM-------GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685
Query: 372 DAVSY 376
+ +Y
Sbjct: 686 NVETY 690
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 141/321 (43%), Gaps = 21/321 (6%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCM----TERG--LKPNLISFNAVVQGLCGKGRMX 139
+ T L+ C RVDEA+ + M T+ G +K + I FN ++ GLC GR+
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 140 XXXXXXXXMN-QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M ++ P+ TY LI +C G A++V+S M + P+V T N +
Sbjct: 388 EAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTI 447
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
+ R L AV F M + + +VVTY TLI C + ++EKA +M+
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV--SNVEKAMYWYEKMLEA 505
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G PDA Y LI LC +R +A + ++ G S + Y L+ + + K
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ + +M +G P +TYN +I E ++ M E GL P
Sbjct: 566 YEMLTDMEKEGK--------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 375 SYCTVILGFCRIREPGKAYEL 395
+Y VI +C + E +A +L
Sbjct: 618 TYGAVIDAYCSVGELDEALKL 638
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 104/249 (41%), Gaps = 7/249 (2%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E E V TY L+ A C V++AM M E G P+ + A++ GLC R
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
+ + + D Y LI LFCDK + K ++L++M G P TYN L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM-VH 253
I + E + M E L P V TY +I +C + E L++A ++ +M +H
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE--LDEALKLFKDMGLH 645
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK 313
+ P+ Y LI +A L EM V PN ETY L + Q
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGET 705
Query: 314 AFHLQDEMT 322
L DEM
Sbjct: 706 LLKLMDEMV 714
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 154/393 (39%), Gaps = 76/393 (19%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS--------------------- 124
E +NAL+ + + ++ M E ++P++++
Sbjct: 293 EAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVF 352
Query: 125 --------------------FNAVVQGLCGKGRMXXXXXXXXXMN-QKDLAPDERTYTSL 163
FN ++ GLC GR+ M ++ P+ TY L
Sbjct: 353 EQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCL 412
Query: 164 IHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDL 219
I +C G A++V+S M + P+V T N ++ R L AV F M + +
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 220 SPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEA 279
+VVTY TLI C + ++EKA +M+ G PDA Y LI LC +R +A
Sbjct: 473 KGNVVTYMTLIHACCSV--SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 280 YDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT------- 332
+ ++ G S + Y L+ + + K + + +M +G P +T
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 333 --------------------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMP-EIGLSP 371
G P+ TY A+I C +G +EAL + + M ++P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 372 DAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
+ V Y +I F ++ G+A LK E+ M+
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 146/352 (41%), Gaps = 32/352 (9%)
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
+ + C + R + A IL + + FNA++ L + M++
Sbjct: 265 FISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK 324
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEM----IDSG--FSPSVATYNRLIRRL---- 202
+ PD T LI+ C +A +V +M D G +N LI L
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 203 RLEDAVGVF-RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
RL++A + R E P+ VTYN LI +C+ + LE A E+ + M I P+
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGK--LETAKEVVSRMKEDEIKPNVV 442
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
T ++ +C L+ A F +M + GV N TY L++A KA + ++M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
G SP Y A+I GLC + R +A+ V+ + E G S D ++Y +I
Sbjct: 503 LE--------AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 382 GFCRIREPGKAYELKVEVDE-----------NMISWLGIWGLFEDTRKSLMQ 422
FC K YE+ ++++ +IS+ G FE + + Q
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 166/382 (43%), Gaps = 58/382 (15%)
Query: 72 VSGRRIREAEQVVDE---TTTYNALV----LAYCCDE-RVDEAMGILRCMTERGLKPNLI 123
+ G++ EA ++ DE T N V L++ C + + DEA +L M RG+ PN++
Sbjct: 420 LKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 124 SFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLI-----------------HL 166
S+N V+ G C + M + +K L P+ TY+ LI H+
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 167 ------------------FCDKGHPGKARKVLSEMIDSG-FSPSVATYNRLI----RRLR 203
C G KAR++L+ MI+ S +YN +I +
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
++ AV + M +SP+V+TY +L++ CK D +A EM+ EM +KG+ D Y
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD--QALEMRDEMKNKGVKLDIPAY 657
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
LI C + + A LF E+L G++P+ Y L++ +R G A L +M
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
G T Y +I GL G A + M +GL PD + Y ++ G
Sbjct: 718 DGLRCDLGT--------YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL 769
Query: 384 CRIREPGKAYELKVEVDENMIS 405
+ + K ++ E+ +N ++
Sbjct: 770 SKKGQFVKVVKMFEEMKKNNVT 791
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 122/248 (49%), Gaps = 6/248 (2%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+YN+++ + + +D A+ M G+ PN+I++ +++ GLC RM M
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR----L 204
K + D Y +LI FC + + A + SE+++ G +PS YN LI R +
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
A+ +++ M + L D+ TY TLI LK+ +L A E+ EM G++PD Y
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGL--LKDGNLILASELYTEMQAVGLVPDEIIYT 763
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
++ L + + + +F EM + V+PN Y ++ + EG +AF L DEM K
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823
Query: 325 GFLPGFVT 332
G LP T
Sbjct: 824 GILPDGAT 831
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 163/355 (45%), Gaps = 22/355 (6%)
Query: 75 RRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCG 134
R ++E + V TY +++LA +D+A+ + M G+ N+++ +++ G C
Sbjct: 292 REMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCK 351
Query: 135 KGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
+ M ++ +P+ T++ LI F G KA + +M G +PSV
Sbjct: 352 NNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFH 411
Query: 195 YNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAE 250
+ +I + + E+A+ +F E L+ +V NT++S CK + D +A E+ ++
Sbjct: 412 VHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTD--EATELLSK 468
Query: 251 MVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQ 310
M +GI P+ +Y ++ C Q+ + A +F +L G+ PNN TY+ L++
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGM-PEIGL 369
A + + MT + + V Y II GLC +G+ +A +L M E L
Sbjct: 529 EQNALEVVNHMTS--------SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL 580
Query: 370 SPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFEDTRKSLMQGL 424
+SY ++I GF + E A E+ N IS I T SLM GL
Sbjct: 581 CVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI------TYTSLMNGL 629
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 147/343 (42%), Gaps = 37/343 (10%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ T L+ A +E+ EA+ +L ERG +P+ + ++ VQ C +
Sbjct: 232 DNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLL 291
Query: 146 XXMNQKDL-APDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----R 200
M +K L P + TYTS+I +G+ A ++ EM+ G S +V LI +
Sbjct: 292 REMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCK 351
Query: 201 RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
L A+ +F M + SP+ VT++ LI F K ++EKA E +M G+ P
Sbjct: 352 NNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWF--RKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
+I+ Q+ EA LF E G++ N +++ +G+ +A L +
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSK 468
Query: 321 MTHKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCLLGR 353
M +G P V+ G P++ TY+ +I G C
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG-CFRNH 527
Query: 354 AEE-ALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
E+ AL V+ M + + V Y T+I G C++ + KA EL
Sbjct: 528 DEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 24/240 (10%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
PNVI +T++ N ++ ++ A E+ KGV+ + Y
Sbjct: 617 PNVIT--YTSLMNGLCKNNRMDQALEMRDEMKNKGVKL----------------DIPAYG 658
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
AL+ +C ++ A + + E GL P+ +N+++ G G M M +
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRLEDA 207
L D TYT+LI G+ A ++ +EM G P Y N L ++ +
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
V +F M + +++P+V+ YN +I+ +E +L++AF + EM+ KGILPD T++ L+
Sbjct: 779 VKMFEEMKKNNVTPNVLIYNAVIAG--HYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 163/416 (39%), Gaps = 107/416 (25%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
V+ T+N L+ C +++A G++R M E G PN +S+N +++GLC +
Sbjct: 152 VIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKAL 211
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG-KARKVLSEMIDS--------------- 186
MN+ + P+ T ++H C KG G +K+L E++DS
Sbjct: 212 YLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTIL 271
Query: 187 -----------------------GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDL 219
YN +IR L + A G M +R +
Sbjct: 272 MDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGV 331
Query: 220 SPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRL--- 276
+PDV TYNTLIS C KE ++A ++ M + G+ PD +Y+ +I+ LC+ +
Sbjct: 332 NPDVFTYNTLISALC--KEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 277 --------------------------------SEAYDLFREMLRWGVSPNNETYTGLMNA 304
S A + ML +GV PN T L++
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449
Query: 305 YRIEGQFSKAFHLQDEMTHKGFLPGFVT---------------------------GFSPS 337
Y G+ A+ +++EM P T G P
Sbjct: 450 YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAY 393
+TY ++ GLC GR ++A +L + G++ D V + + + R++ PG+AY
Sbjct: 510 IITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 16/315 (5%)
Query: 85 DETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXX 144
D + +++++ C ++D A+ + + M G+ P LI+ N ++ GLC G +
Sbjct: 119 DCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGL 178
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRL 204
M + +P+ +Y +LI C + KA + + M G P+ T N ++ L
Sbjct: 179 VREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ 238
Query: 205 EDAVG-VFRGMTERDL------SPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
+ +G + + E L +P + T++ C K ++ +A E+ EM K +
Sbjct: 239 KGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSC-FKNGNVVQALEVWKEMSQKNVP 297
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
D+ Y +IR LC + AY +M++ GV+P+ TY L++A EG+F +A L
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
M + G +P ++Y II GLC+ G A L M + L P+ + +
Sbjct: 358 HGTMQNG--------GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWN 409
Query: 378 TVILGFCRIREPGKA 392
VI G+ R + A
Sbjct: 410 VVIDGYGRYGDTSSA 424
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 132/312 (42%), Gaps = 30/312 (9%)
Query: 55 AFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMT 114
A E+ K ++K V ++SV YN ++ C + A G + M
Sbjct: 284 ALEVWKEMSQKNVPADSV----------------VYNVIIRGLCSSGNMVAAYGFMCDMV 327
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
+RG+ P++ ++N ++ LC +G+ M +APD+ +Y +I C G
Sbjct: 328 KRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 175 KARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLI 230
+A + L M+ S P V +N +I R A+ V M + P+V T N LI
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
+ +K L A+ +K EM I PD TY L+ C L A+ L+ EMLR G
Sbjct: 448 HGY--VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCL 350
P+ TYT L+ +G+ KA L + TG + HV + +
Sbjct: 506 CQPDIITYTELVRGLCWKGRLKKAESLLSRIQ--------ATGITIDHVPFLILAKKYTR 557
Query: 351 LGRAEEALGVLR 362
L R EA V +
Sbjct: 558 LQRPGEAYLVYK 569
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 124/282 (43%), Gaps = 26/282 (9%)
Query: 126 NAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMID 185
+++++ LC +G++ M + P T+ L++ C G+ KA ++ EM +
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 186 SGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
G SP+ +YN LI+ L ++ A+ +F M + + P+ VT N ++ C+
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ------ 238
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLIRTLCL--------QQRLSEAYDLFREMLRWGVSP 293
+ + + + IL + PL +C + +A ++++EM + V
Sbjct: 239 KGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPA 298
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
++ Y ++ G A+ +M +G +P TYN +I LC G+
Sbjct: 299 DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGV--------NPDVFTYNTLISALCKEGK 350
Query: 354 AEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+EA + M G++PD +SY +I G C + +A E
Sbjct: 351 FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 298 YTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEA 357
++ +M ++G+ A L+ +M + G +PG +T +N ++ GLC G E+A
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLIT--------HNHLLNGLCKAGYIEKA 175
Query: 358 LGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
G++R M E+G SP+ VSY T+I G C + KA L
Sbjct: 176 DGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYL 213
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 26/180 (14%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNS------VSGRRIREAEQVVDE 86
NV+I G+ G+ S + +L G + V +N+ V G R+ +A V +E
Sbjct: 409 NVVIDGYGRYGDTSSALSVLN---LMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNE 465
Query: 87 ---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGR 137
TTTYN L+ A C + A + M RG +P++I++ +V+GLC KGR
Sbjct: 466 MRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGR 525
Query: 138 MXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNR 197
+ + + D + L + PG+A V + +AT NR
Sbjct: 526 LKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLV--------YKKWLATRNR 577
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 139/305 (45%), Gaps = 13/305 (4%)
Query: 76 RIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
R++ E+ TYN L+ YC +++ A ++ M E +KPN+++ N +V G+C
Sbjct: 395 RMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
+ M ++ + + TY +LIH C + KA +M+++G SP Y
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 196 NRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM 251
LI L R DA+ V + E S D++ YN LI FC + + EK +EM +M
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC--DKNNTEKVYEMLTDM 572
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
+G PD+ TY LI + + +M G+ P TY +++AY G+
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 312 SKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
+A L +M G + +P+ V YN +I LG +AL + M + P
Sbjct: 633 DEALKLFKDM-------GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685
Query: 372 DAVSY 376
+ +Y
Sbjct: 686 NVETY 690
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 142/321 (44%), Gaps = 21/321 (6%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCM----TERG--LKPNLISFNAVVQGLCGKGRMX 139
+ T L+ C RVDEA+ + M T+ G +K + I FN ++ GLC GR+
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 140 XXXXXXXXMN-QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M ++ AP+ TY LI +C G A++V+S M + P+V T N +
Sbjct: 388 EAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTI 447
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
+ R L AV F M + + +VVTY TLI C + ++EKA +M+
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS--NVEKAMYWYEKMLEA 505
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G PDA Y LI LC +R +A + ++ G S + Y L+ + + K
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKV 565
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ + +M +G P +TYN +I E ++ M E GL P
Sbjct: 566 YEMLTDMEKEGK--------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 375 SYCTVILGFCRIREPGKAYEL 395
+Y VI +C + E +A +L
Sbjct: 618 TYGAVIDAYCSVGELDEALKL 638
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 108/259 (41%), Gaps = 7/259 (2%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E E V TY L+ A C V++AM M E G P+ + A++ GLC R
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
+ + + D Y LI LFCDK + K ++L++M G P TYN L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM-VH 253
I + E + M E L P V TY +I +C + E L++A ++ +M +H
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE--LDEALKLFKDMGLH 645
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK 313
+ P+ Y LI +A L EM V PN ETY L + Q
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGET 705
Query: 314 AFHLQDEMTHKGFLPGFVT 332
L DEM + P +T
Sbjct: 706 LLKLMDEMVEQSCEPNQIT 724
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 166/418 (39%), Gaps = 56/418 (13%)
Query: 31 PPNVIIRGFTA----VGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDE 86
PPN I G L +E K + L+ + GV NSV R
Sbjct: 219 PPNRITADIVLHEVWKGRLLTEEKIIA----LISRFSSHGVSPNSVWLTR---------- 264
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
+ + C + R + A IL + + FNA++ L +
Sbjct: 265 ------FISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVL 318
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM----IDSG--FSPSVATYNRLIR 200
M++ + PD T LI+ C +A +V +M D G +N LI
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLID 378
Query: 201 RL----RLEDAVGVF-RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
L RL++A + R E +P+ VTYN LI +C+ + LE A E+ + M
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGK--LETAKEVVSRMKEDE 436
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
I P+ T ++ +C L+ A F +M + GV N TY L++A KA
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVS 375
+ ++M G SP Y A+I GLC + R +A+ V+ + E G S D ++
Sbjct: 497 YWYEKMLE--------AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 376 YCTVILGFCRIREPGKAYELKVEVDE-----------NMISWLGIWGLFEDTRKSLMQ 422
Y +I FC K YE+ ++++ +IS+ G FE + + Q
Sbjct: 549 YNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 20/272 (7%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ Y AL+ C R +A+ ++ + E G +L+++N ++ C K
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEML 569
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M ++ PD TY +LI F +++ +M + G P+V TY +I
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSV 629
Query: 203 -RLEDAVGVFRGM-TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
L++A+ +F+ M ++P+ V YN LI+ F KL + +A +K EM K + P+
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG--NFGQALSLKEEMKMKMVRPNV 687
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
+TY L + L + + L EM+ PN T LM R+ G DE
Sbjct: 688 ETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME--RLSG--------SDE 737
Query: 321 MTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
+ L F+ G+S + T A + + LG
Sbjct: 738 LVK---LRKFMQGYSVASPTEKASPFDVFSLG 766
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 2/152 (1%)
Query: 62 GTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCM-TERGLKP 120
G K ES ++RE + + TTY A++ AYC +DEA+ + + M + P
Sbjct: 592 GKHKDFESVERMMEQMRE-DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 121 NLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVL 180
N + +N ++ G M K + P+ TY +L +K K++
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLM 710
Query: 181 SEMIDSGFSPSVATYNRLIRRLRLEDAVGVFR 212
EM++ P+ T L+ RL D + R
Sbjct: 711 DEMVEQSCEPNQITMEILMERLSGSDELVKLR 742
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 140/302 (46%), Gaps = 14/302 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
E + L+ + V +A+ +L M + GL+P+ F ++ LC G +
Sbjct: 166 EPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVF 225
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M +K P+ R +TSL++ +C +G +A++VL +M ++G P + + L+
Sbjct: 226 EDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHA 284
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
++ DA + M +R P+V Y LI C+ E +++A + EM G D
Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR-TEKRMDEAMRVFVEMERYGCEADIV 343
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
TY LI C + + Y + +M + GV P+ TY +M A+ + QF + L ++M
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 403
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+G P + YN +I C LG +EA+ + M GLSP ++ +I
Sbjct: 404 KRRGCHPDL--------LIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMIN 455
Query: 382 GF 383
GF
Sbjct: 456 GF 457
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 150/360 (41%), Gaps = 56/360 (15%)
Query: 36 IRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN---- 91
+R F AV L E +K EL++ + S +++A +V+DE Y
Sbjct: 144 MRQFGAVWGLIEEMRKTNP--ELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPD 201
Query: 92 -----ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
L+ A C + V EA + M E+ PNL F +++ G C +G++
Sbjct: 202 EYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLV 260
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M + L PD +T+L+ + G A ++++M GF P+V Y LI+ L
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE 320
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL------------------------- 236
R+++A+ VF M D+VTY LIS FCK
Sbjct: 321 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTY 380
Query: 237 --------KEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
K+ E+ E+ +M +G PD Y +IR C + EA L+ EM
Sbjct: 381 MQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEA 440
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGL 348
G+SP +T+ ++N + +G +A + EM +G +P + T +++ L
Sbjct: 441 NGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFS------APQYGTLKSLLNNL 494
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
L + + + L+R + +A ++ EM ++G+ P+ + L++A G +A
Sbjct: 164 LIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASK 223
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
+ ++M K F P+ + +++YG C G+ EA VL M E GL PD V +
Sbjct: 224 VFEDMREK---------FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVF 274
Query: 377 CTVILGFCRIREPGKAYEL 395
++ G+ + AY+L
Sbjct: 275 TNLLSGYAHAGKMADAYDL 293
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 6/194 (3%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
V+ TY +++A+ E+ +E + ++ M RG P+L+ +N V++ C G +
Sbjct: 373 VMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAV 432
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGF--SPSVAT----YN 196
M L+P T+ +I+ F +G +A EM+ G +P T N
Sbjct: 433 RLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLN 492
Query: 197 RLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
L+R +LE A V+ ++ + S ++ I + +++A +M+ +
Sbjct: 493 NLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDL 552
Query: 257 LPDADTYEPLIRTL 270
+P +TY L++ L
Sbjct: 553 MPQPNTYAKLMKGL 566
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 164/396 (41%), Gaps = 59/396 (14%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
+A + +T T +++ A R EA + + + G+KP ++NA+++G G +
Sbjct: 296 QATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPL 355
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M ++ ++PDE TY+ LI + + G AR VL EM P+ ++RL
Sbjct: 356 KDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRL 415
Query: 199 IRRLR---------------------------------------LEDAVGVFRGMTERDL 219
+ R L+ A+ F M +
Sbjct: 416 LAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGI 475
Query: 220 SPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEA 279
PD VT+NTLI CK + A EM M +G LP A TY +I + Q+R +
Sbjct: 476 EPDRVTWNTLIDCHCKHGRHIV--AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDM 533
Query: 280 YDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHV 339
L +M G+ PN T+T L++ Y G+F+ A +EM G PS
Sbjct: 534 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS--------VGLKPSST 585
Query: 340 TYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
YNA+I G +E+A+ R M GL P ++ ++I F R +A+ + +
Sbjct: 586 MYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Query: 400 DENMISWLGIWGLFED--TRKSLMQGLSNEDTFSSL 433
EN G+ D T +LM+ L D F +
Sbjct: 646 KEN--------GVKPDVVTYTTLMKALIRVDKFQKV 673
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 131/303 (43%), Gaps = 16/303 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX--XXX 146
TYNAL+ A + +++A+ ++ M + G + + ++++ V+Q L ++
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
+ + L D + +I F G P KA ++L +G S AT +I L
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
R +A +F + + + P YN L+ + +K L+ A M +EM +G+ PD T
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGY--VKTGPLKDAESMVSEMEKRGVSPDEHT 376
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y LI R A + +EM V PN+ ++ L+ +R G++ K F + EM
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
G P YN +I + A+ M G+ PD V++ T+I
Sbjct: 437 S--------IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 383 FCR 385
C+
Sbjct: 489 HCK 491
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 153/416 (36%), Gaps = 76/416 (18%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFEL---LKAGTEKGVESNSVSGRRIREAEQVVDE--- 86
N II GF G+ + +G A K T + S R EAE + +E
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 87 ------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
T YNAL+ Y + +A ++ M +RG+ P+ +++ ++ GR
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M D+ P+ ++ L+ F D+G K +VL EM G P YN +I
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 201 RLR----LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP----------------- 239
L+ A+ F M + PD VT+NTLI CK
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 240 -------------DLEKAFEMK---AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLF 283
D E+ +MK +M +GILP+ T+ L+ R ++A +
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 284 REMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT----------- 332
EM G+ P++ Y L+NAY G +A + MT G P +
Sbjct: 573 EEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGED 632
Query: 333 ----------------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
G P VTY ++ L + + ++ V M G PD
Sbjct: 633 RRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 6/239 (2%)
Query: 80 AEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
+E + + T+N L+ +C R A + M RG P ++N ++ + R
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWD 531
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI 199
M + + P+ T+T+L+ ++ G A + L EM G PS YN LI
Sbjct: 532 DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI 591
Query: 200 ----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
+R E AV FR MT L P ++ N+LI+ F + + D E AF + M G
Sbjct: 592 NAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR-DAE-AFAVLQYMKENG 649
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
+ PD TY L++ L + + ++ EM+ G P+ + + L +A R Q +A
Sbjct: 650 VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 18/172 (10%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
PNV+ T + ++ +S + A E L+ G++ +S T YN
Sbjct: 547 PNVVTH--TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSS----------------TMYN 588
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
AL+ AY ++A+ R MT GLKP+L++ N+++ R M +
Sbjct: 589 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN 648
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR 203
+ PD TYT+L+ K V EMI SG P + L LR
Sbjct: 649 GVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALR 700
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 135/295 (45%), Gaps = 14/295 (4%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
Y+A++ + E LR + ERG P+ +FNA + L +
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFV 382
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
+ + P Y L+ + + + L +M G SV +YN +I L R+E
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIE 442
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+A M +R +SP++VT+NT +S + D++K + +++ G PD T+
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSV--RGDVKKVHGVLEKLLVHGFKPDVITFSL 500
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+I LC + + +A+D F+EML WG+ PN TY L+ + G ++ L +M
Sbjct: 501 IINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE-- 558
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
G SP YNA I C + + ++A +L+ M IGL PD +Y T+I
Sbjct: 559 ------NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLI 607
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
Y LV A +R E L+ M GL ++ S+NAV+ LC R+ M
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRLE 205
+ ++P+ T+ + + + +G K VL +++ GF P V T+ N L R ++
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIK 512
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
DA F+ M E + P+ +TYN LI C + D ++ ++ A+M G+ PD Y
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTD--RSVKLFAKMKENGLSPDLYAYNA 570
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
I++ C +++ +A +L + MLR G+ P+N TY+ L+ A G+ S+A + + G
Sbjct: 571 TIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Query: 326 FLP 328
+P
Sbjct: 631 CVP 633
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 162/391 (41%), Gaps = 53/391 (13%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVD----ETTTYNALVLAYCCDERVDEAMGILRCM 113
L A + V+SNS+ ++ + D + TYN L+ C VDEA+ +++ M
Sbjct: 182 LYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQM 241
Query: 114 TERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHP 173
+ G +PN+ ++ ++ G GR+ M + L P+E T + +H P
Sbjct: 242 EQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPP 301
Query: 174 GKARKVLSEMIDSGFSPSVATYNRLIRRLR---LEDAVGVF-RGMTERDLSPDVVTYNTL 229
KA +VL ++ + Y+ ++ L + G F R + ER PD T+N
Sbjct: 302 CKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAA 361
Query: 230 ISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD---------------------------- 261
+S C LK DL + + V +G+ P +
Sbjct: 362 MS--CLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVD 419
Query: 262 -------TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
+Y +I LC +R+ A EM G+SPN T+ ++ Y + G K
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ +++ V GF P +T++ II LC ++A + M E G+ P+ +
Sbjct: 480 HGVLEKL--------LVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEI 531
Query: 375 SYCTVILGFCRIREPGKAYELKVEVDENMIS 405
+Y +I C + ++ +L ++ EN +S
Sbjct: 532 TYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 137/324 (42%), Gaps = 17/324 (5%)
Query: 75 RRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCG 134
R+I E + D ++T+NA + + E I RG+KP + +VQ L
Sbjct: 344 RKIGERGYIPD-SSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLN 402
Query: 135 KGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
R M L +Y ++I C A L+EM D G SP++ T
Sbjct: 403 AQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVT 462
Query: 195 YNRLIRRLRLEDAVGVFRGMTERDL----SPDVVTYNTLISKFCKLKEPDLEKAFEMKAE 250
+N + + V G+ E+ L PDV+T++ +I+ C+ KE ++ AF+ E
Sbjct: 463 FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKE--IKDAFDCFKE 520
Query: 251 MVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQ 310
M+ GI P+ TY LIR+ C + LF +M G+SP+ Y + ++ +
Sbjct: 521 MLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRK 580
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
KA L M G P + TY+ +I L GR EA + + G
Sbjct: 581 VKKAEELLKTMLR--------IGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCV 632
Query: 371 PDAVSYCTVILGFCRIREPGKAYE 394
PD SY ++ +R+ G + E
Sbjct: 633 PD--SYTKRLVEELDLRKSGLSRE 654
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 147/410 (35%), Gaps = 103/410 (25%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T YNA++ A +D A + M G KP+ ++N ++ G+C KG +
Sbjct: 180 TRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVK 239
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M Q+ P+ TYT LI F G +A K L M +P+ AT + +
Sbjct: 240 QMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCL 299
Query: 203 ----RLEDAVG-------------------------------VFRGMTERDLSPDVVTYN 227
E VG R + ER PD T+N
Sbjct: 300 PPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFN 359
Query: 228 TLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD-------------------------- 261
+S C LK DL + + V +G+ P +
Sbjct: 360 AAMS--CLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 262 ---------TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFS 312
+Y +I LC +R+ A EM G+SPN T+ ++ Y + G
Sbjct: 418 VDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVK 477
Query: 313 KAFHLQDEMTHKGFLPGFVT---------------------------GFSPSHVTYNAII 345
K + +++ GF P +T G P+ +TYN +I
Sbjct: 478 KVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILI 537
Query: 346 YGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
C G + ++ + M E GLSPD +Y I FC++R+ KA EL
Sbjct: 538 RSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 25/202 (12%)
Query: 29 LSPPNVIIRGFTAVGNLQSESKKVGGAFE-LLKAGTEKGVESNSVSGRRIREAEQVVDET 87
+SP V F + +++ + KKV G E LL G + V
Sbjct: 456 ISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDV-------------------- 495
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
T++ ++ C + + +A + M E G++PN I++N +++ C G
Sbjct: 496 ITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAK 555
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----R 203
M + L+PD Y + I FC KA ++L M+ G P TY+ LI+ L R
Sbjct: 556 MKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGR 615
Query: 204 LEDAVGVFRGMTERDLSPDVVT 225
+A +F + PD T
Sbjct: 616 ESEAREMFSSIERHGCVPDSYT 637
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 176/395 (44%), Gaps = 55/395 (13%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+T +NA++ A +D+AM I M E G KP +FN +++G G++
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Query: 146 XXMNQKD-LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL------ 198
M + + L P++RT L+ +C++ +A ++ +M G P V T+N L
Sbjct: 448 DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 507
Query: 199 -----------IRRL-----------------------RLEDAVGVFRGMTERDLSPDVV 224
I R+ ++E+A+ F M E + P++
Sbjct: 508 IGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLF 567
Query: 225 TYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFR 284
+N+LI F + D++ E+ M G+ PD T+ L+ + +++
Sbjct: 568 VFNSLIKGFLNIN--DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625
Query: 285 EMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAI 344
+ML G+ P+ ++ L Y G+ KA + ++M G P+ V Y I
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK--------FGVRPNVVIYTQI 677
Query: 345 IYGLCLLGRAEEALGVLRGMPEI-GLSPDAVSYCTVILGFCRIREPGKAYELKVEVD-EN 402
I G C G ++A+ V + M I GLSP+ +Y T+I GF ++P KA EL +++ +N
Sbjct: 678 ISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKN 737
Query: 403 MISWLGIWGLFEDTRKSLMQGLSNEDTFSSLMNDY 437
++ L D KS+ G+SN + ++L + +
Sbjct: 738 VVPTRKTMQLIADGWKSI--GVSNSNDANTLGSSF 770
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 7/233 (3%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
+V T +V YC + +++EA+ M E G+ PNL FN++++G M
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL--- 198
M + + PD T+++L++ + G + ++ ++M++ G P + ++ L
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG 645
Query: 199 -IRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH-KGI 256
R E A + M + + P+VV Y +IS +C E ++KA ++ +M G+
Sbjct: 646 YARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGE--MKKAMQVYKKMCGIVGL 703
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEG 309
P+ TYE LI ++ +A +L ++M V P +T + + ++ G
Sbjct: 704 SPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 147/329 (44%), Gaps = 47/329 (14%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
+R V ++ T+N L+ +C + VDEA I + M P+++++N ++ GLC G
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 137 RMXXXXXXXXXMNQK--DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
++ M +K D+ P+ +YT+L+ +C K +A V +M+ G P+ T
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT 318
Query: 195 YNRLIRRL----RLEDAVGVFRGMTE--RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
YN LI+ L R ++ + G + +PD T+N LI C L+ A ++
Sbjct: 319 YNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHC--DAGHLDAAMKVF 376
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
EM++ + PD+ +Y LIRTLC++ A LF E+ E G
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE------KEVLLG-------- 422
Query: 309 GQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIG 368
+DE P YN + LC G+ ++A V R + + G
Sbjct: 423 ---------KDEC-------------KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG 460
Query: 369 LSPDAVSYCTVILGFCRIREPGKAYELKV 397
+ D SY T+I G CR + AYEL V
Sbjct: 461 VQ-DPPSYKTLITGHCREGKFKPAYELLV 488
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 21/290 (7%)
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
FN++++ G M Q ++P T+ SL+ + +G G A + EM
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 185 DS-GFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP 239
+ G +P T+N LI + +++A +F+ M +PDVVTYNT+I C+ +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 240 DLEKAFEMKAEMVHKG--ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNET 297
+ A + + M+ K + P+ +Y L+R C++Q + EA +F +ML G+ PN T
Sbjct: 261 KI--AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT 318
Query: 298 YTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG---FVTGFSPSHVTYNAIIYGLCLLGRA 354
Y L+ S+A H DE+ K L G T F+P T+N +I C G
Sbjct: 319 YNTLIKG------LSEA-HRYDEI--KDILIGGNDAFTTFAPDACTFNILIKAHCDAGHL 369
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
+ A+ V + M + L PD+ SY +I C E +A L E+ E +
Sbjct: 370 DAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEV 419
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 144/325 (44%), Gaps = 39/325 (12%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
L +AG K + N +SG +++A V +Y LV YC + +DEA+ + M RG
Sbjct: 254 LCRAGKVK-IAHNVLSGM-LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK--DLAPDERTYTSLIHLFCDKGHPGK 175
LKPN +++N +++GL R N APD T+ LI CD GH
Sbjct: 312 LKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDA 371
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK 235
A KV EM++ P A+Y+ LIR L + + E D + + +N L K
Sbjct: 372 AMKVFQEMLNMKLHPDSASYSVLIRTLCMRN---------EFDRAETL--FNELFEKEVL 420
Query: 236 LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
L + + + P A Y P+ LC + +A +FR++++ GV +
Sbjct: 421 LGKDECK---------------PLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DP 464
Query: 296 ETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAE 355
+Y L+ + EG+F A+ L M + F+P TY +I GL +G A
Sbjct: 465 PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDL--------ETYELLIDGLLKIGEAL 516
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVI 380
A L+ M P A ++ +V+
Sbjct: 517 LAHDTLQRMLRSSYLPVATTFHSVL 541
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 101/258 (39%), Gaps = 39/258 (15%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YN + C + + +A + R + +RG++ + S+ ++ G C +G+ M
Sbjct: 433 YNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLML 491
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN----RLIRRLRLE 205
+++ PD TY LI G A L M+ S + P T++ L +R
Sbjct: 492 RREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFAN 551
Query: 206 DAVGVFRGMTER------DLSPDVV------------------TYNT--------LISKF 233
++ + M E+ DLS VV Y+ L+
Sbjct: 552 ESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYL 611
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
C+ ++ L A + + K + D DT +I LC +R SEA+ L+ E++ G
Sbjct: 612 CENRK--LLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQ 669
Query: 294 NNETYTGLMNAYRIEGQF 311
+ L NA G++
Sbjct: 670 QLSCHVVLRNALEAAGKW 687
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 22/286 (7%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDA 207
M D P ++ Y +++ + ++ A K M + G P+VA+ N LI+ L D
Sbjct: 112 MKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDG 171
Query: 208 -----VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
+ +F M +R PD TY TLIS C+ D +A ++ EMV K P T
Sbjct: 172 TVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRID--EAKKLFTEMVEKDCAPTVVT 229
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y LI LC + + EA EM G+ PN TY+ LM+ +G+ +A L + M
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
+G P+ VTY +I GLC + +EA+ +L M GL PDA Y VI G
Sbjct: 290 ARGC--------RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISG 341
Query: 383 FCRIREPGKAYELKVEVDENMISWLG----IWGLFEDTRKSLMQGL 424
FC I + +A +DE ++ + W + T +++GL
Sbjct: 342 FCAISKFREAANF---LDEMILGGITPNRLTWNIHVKTSNEVVRGL 384
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 137/301 (45%), Gaps = 31/301 (10%)
Query: 87 TTTYNALVLAYC-CDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ N L+ A C D VD + I M +RG P+ ++ ++ GLC GR+
Sbjct: 156 VASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLF 215
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M +KD AP TYTSLI+ C + +A + L EM G P+V TY+ L+ L
Sbjct: 216 TEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKD 275
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
R A+ +F M R P++VTY TLI+ C KE +++A E+ M +G+ PDA
Sbjct: 276 GRSLQAMELFEMMMARGCRPNMVTYTTLITGLC--KEQKIQEAVELLDRMNLQGLKPDAG 333
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN-----------NETYTGLMNAYRIEGQ 310
Y +I C + EA + EM+ G++PN NE GL Y
Sbjct: 334 LYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP---- 389
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
S+AF L M + G S T +++ LC G ++A+ ++ + G
Sbjct: 390 -SRAFTLYLSMRSR--------GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI 440
Query: 371 P 371
P
Sbjct: 441 P 441
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 14/254 (5%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
++ TY L+ C R+DEA + M E+ P ++++ +++ GLCG +
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYL 250
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M K + P+ TY+SL+ C G +A ++ M+ G P++ TY LI L
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD-- 259
++++AV + M + L PD Y +IS FC + + +A EM+ GI P+
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK--FREAANFLDEMILGGITPNRL 368
Query: 260 -----ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
T ++R LC S A+ L+ M G+S ET L+ +G+F KA
Sbjct: 369 TWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKA 427
Query: 315 FHLQDEMTHKGFLP 328
L DE+ G +P
Sbjct: 428 VQLVDEIVTDGCIP 441
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 13/276 (4%)
Query: 124 SFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM 183
SF +V L + M ++ E S+ + P + +V +M
Sbjct: 53 SFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKM 112
Query: 184 IDSGFSPSVATYNR----LIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP 239
D PS Y L+ +L A ++ M E L P V + N LI C+ +
Sbjct: 113 KDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCR-NDG 171
Query: 240 DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT 299
++ ++ EM +G PD+ TY LI LC R+ EA LF EM+ +P TYT
Sbjct: 172 TVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 300 GLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALG 359
L+N +A +EM K G P+ TY++++ GLC GR+ +A+
Sbjct: 232 SLINGLCGSKNVDEAMRYLEEMKSK--------GIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+ M G P+ V+Y T+I G C+ ++ +A EL
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 147/327 (44%), Gaps = 51/327 (15%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T+ ++ Y ++VDEA+ M + L PNL++FN ++ LC + M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL------ 202
+ PD +TY+ L+ + + + KAR+V EMID+G P + TY+ ++ L
Sbjct: 230 RDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 203 ---------------------------------RLEDAVGVFRGMTERDLSPDVVTYNTL 229
RLE+AV F M + DV +N+L
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 230 ISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW 289
I FCK ++ + + EM KG+ P++ + ++R L + EA+D+FR+M++
Sbjct: 349 IGAFCKANR--MKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK- 405
Query: 290 GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLC 349
P+ +TYT ++ + + + A + M KG PS T++ +I GLC
Sbjct: 406 VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF--------PSMHTFSVLINGLC 457
Query: 350 LLGRAEEALGVLRGMPEIGLSPDAVSY 376
++A +L M E+G+ P V++
Sbjct: 458 EERTTQKACVLLEEMIEMGIRPSGVTF 484
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 129/295 (43%), Gaps = 31/295 (10%)
Query: 31 PPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEK---------------GVESNSVSGR 75
PPN++ F + + +SK V A E+ + ++ G E N R
Sbjct: 200 PPNLV--AFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAR 257
Query: 76 RIREAEQVVD-----ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
+ +++D + TY+ +V C RVDEA+GI+R M KP ++ +V
Sbjct: 258 EV--FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVH 315
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
+ R+ M + + D + SLI FC +VL EM G +P
Sbjct: 316 TYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTP 375
Query: 191 SVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFE 246
+ + N ++R L ++A VFR M + PD TY +I FC+ KE +E A +
Sbjct: 376 NSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKE--METADK 432
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
+ M KG+ P T+ LI LC ++ +A L EM+ G+ P+ T+ L
Sbjct: 433 VWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 15/279 (5%)
Query: 66 GVESNSVSGRRIREAEQVVD--------ETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
G+ S + +R+A++V + ++ TY+ L+ + + + +A + R M + G
Sbjct: 208 GLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAG 267
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
P++++++ +V LC GR+ M+ P Y+ L+H + + +A
Sbjct: 268 CHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAV 327
Query: 178 KVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
EM SG VA +N LI + R+++ V + M + ++P+ + N ++
Sbjct: 328 DTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHL 387
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
+ E D +AF++ +M+ K PDADTY +I+ C ++ + A +++ M + GV P
Sbjct: 388 IERGEKD--EAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT 332
+ T++ L+N E KA L +EM G P VT
Sbjct: 445 SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 483
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 16/196 (8%)
Query: 190 PSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF 245
P++ +N L+ L + A VF M +R +PD TY+ L+ + K EP+L KA
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGK--EPNLPKAR 257
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY 305
E+ EM+ G PD TY ++ LC R+ EA + R M P Y+ L++ Y
Sbjct: 258 EVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTY 317
Query: 306 RIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMP 365
E + +A EM +G +N++I C R + VL+ M
Sbjct: 318 GTENRLEEAVDTFLEMER--------SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 369
Query: 366 EIGLSPDAVSYCTVIL 381
G++P++ S C +IL
Sbjct: 370 SKGVTPNSKS-CNIIL 384
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 127/293 (43%), Gaps = 31/293 (10%)
Query: 7 SMLLTRPNPMKLLRLSTCLRNRLSPPN----VIIRGFTAVGNLQSESKKVGGAF-ELLKA 61
S L N K + +R+R +P + +++ G+ NL K F E++ A
Sbjct: 211 SALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLP----KAREVFREMIDA 266
Query: 62 GTEKGVESNSV------SGRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEA 106
G + + S+ R+ EA +V T Y+ LV Y + R++EA
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326
Query: 107 MGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHL 166
+ M G+K ++ FN+++ C RM M K + P+ ++ ++
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386
Query: 167 FCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----RLRLEDAVGVFRGMTERDLSPD 222
++G +A V +MI P TY +I+ + +E A V++ M ++ + P
Sbjct: 387 LIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 445
Query: 223 VVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQR 275
+ T++ LI+ C+ E +KA + EM+ GI P T+ L + L ++R
Sbjct: 446 MHTFSVLINGLCE--ERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 104 DEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSL 163
DEA + R M + +P+ ++ V++ C K M M +K + P T++ L
Sbjct: 394 DEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVL 452
Query: 164 IHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTER 217
I+ C++ KA +L EMI+ G PS T+ RL + L E+ V + + E+
Sbjct: 453 INGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEK 506
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 171/403 (42%), Gaps = 67/403 (16%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
P+V ++ V N +++ K+ A EL +E+GV + T YN
Sbjct: 182 PDVF--SYSTVINDLAKAGKLDDALELFDEMSERGVAP----------------DVTCYN 223
Query: 92 ALVLAYCCDERVDEAMGIL-RCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQ 150
L+ + ++ AM + R + + + PN+ + N ++ GL GR+ M Q
Sbjct: 224 ILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
Query: 151 KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM------ID--------SGF-------- 188
+ D TY+SLIH CD G+ KA V +E+ ID GF
Sbjct: 284 NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE 343
Query: 189 ------------SPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISK 232
S ++ +YN LI+ L ++++A ++R M + + D TY I
Sbjct: 344 SLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHG 403
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
C + KA + E+ G D Y +I LC ++RL EA +L +EM + GV
Sbjct: 404 LCV--NGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVE 461
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
N+ L+ + + +A EM G P+ V+YN +I GLC G
Sbjct: 462 LNSHVCNALIGGLIRDSRLGEASFFLREMGK--------NGCRPTVVSYNILICGLCKAG 513
Query: 353 RAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+ EA ++ M E G PD +Y ++ G CR R+ A EL
Sbjct: 514 KFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 149/349 (42%), Gaps = 50/349 (14%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TYN ++ +C ++ E++ + R M + N++S+N +++GL G++
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIW 382
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RR 201
M K A D+ TY IH C G+ KA V+ E+ SG V Y +I ++
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 202 LRLEDAVGVFRGMTERDLS-----------------------------------PDVVTY 226
RLE+A + + M++ + P VV+Y
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 227 NTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM 286
N LI CK + AF EM+ G PD TY L+ LC +++ A +L+ +
Sbjct: 503 NILICGLCKAGKFGEASAF--VKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF 560
Query: 287 LRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIY 346
L+ G+ + + L++ G+ A + M H+ + + VTYN ++
Sbjct: 561 LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC--------TANLVTYNTLME 612
Query: 347 GLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
G +G + A + M ++GL PD +SY T++ G C R A E
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 163/351 (46%), Gaps = 24/351 (6%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E V TYN L+ C + ++A G L M + G KP++ S++ V+ L G++
Sbjct: 141 ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKL 200
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI-DSGFSPSVATYNR 197
M+++ +APD Y LI F + A ++ ++ DS P+V T+N
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 198 LIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH 253
+I L R++D + ++ M + + D+ TY++LI C +++KA + E+
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC--DAGNVDKAESVFNELDE 318
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK 313
+ D TY ++ C ++ E+ +L+R ++ S N +Y L+ G+ +
Sbjct: 319 RKASIDVVTYNTMLGGFCRCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDE 377
Query: 314 AFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
A + M K G++ TY I+GLC+ G +ALGV++ + G D
Sbjct: 378 ATMIWRLMPAK--------GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDV 429
Query: 374 VSYCTVILGFCRIREPGKAYEL-------KVEVDENMISWLGIWGLFEDTR 417
+Y ++I C+ + +A L VE++ ++ + L I GL D+R
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL-IGGLIRDSR 479
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 15/243 (6%)
Query: 75 RRIREAEQVVDETTTY---------NALVLAYCCDERVDEAMGILRCMTERGLKPNLISF 125
+R+ EA +V E + + NAL+ D R+ EA LR M + G +P ++S+
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 126 NAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMID 185
N ++ GLC G+ M + PD +TY+ L+ C A ++ + +
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562
Query: 186 SGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
SG V +N LI L +L+DA+ V M R+ + ++VTYNTL+ F K+ D
Sbjct: 563 SGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKV--GDS 620
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
+A + M G+ PD +Y +++ LC+ + +S A + F + G+ P T+ L
Sbjct: 621 NRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNIL 680
Query: 302 MNA 304
+ A
Sbjct: 681 VRA 683
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 14/327 (4%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
L+K E G + R+ A+ + TTY + C + V++A+G+++ + G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
++ ++ +++ LC K R+ M++ + + +LI G+A
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484
Query: 178 KVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
L EM +G P+V +YN LI L + +A + M E PD+ TY+ L+
Sbjct: 485 FFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGL 544
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
C+ ++ DL A E+ + + G+ D + LI LC +L +A + M +
Sbjct: 545 CRDRKIDL--ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 602
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
N TY LM + G ++A + M + G P ++YN I+ GLC+
Sbjct: 603 NLVTYNTLMEGFFKVGDSNRATVIWGYM--------YKMGLQPDIISYNTIMKGLCMCRG 654
Query: 354 AEEALGVLRGMPEIGLSPDAVSYCTVI 380
A+ G+ P ++ ++
Sbjct: 655 VSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 15/246 (6%)
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGV 210
P R+Y +L++ F + K + + +G +P++ TYN LI ++ E A G
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 211 FRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTL 270
M + PDV +Y+T+I+ K + L+ A E+ EM +G+ PD Y LI
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGK--LDDALELFDEMSERGVAPDVTCYNILIDGF 229
Query: 271 CLQQRLSEAYDLFREMLR-WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG 329
++ A +L+ +L V PN +T+ +++ G+ + + M
Sbjct: 230 LKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ------ 283
Query: 330 FVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREP 389
TY+++I+GLC G ++A V + E S D V+Y T++ GFCR +
Sbjct: 284 --NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKI 341
Query: 390 GKAYEL 395
++ EL
Sbjct: 342 KESLEL 347
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 34/272 (12%)
Query: 187 GFSPSVATYNRLIRRL---RLEDAVG-VFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
G++ S Y+ ++RRL R+ + V + + ++ D ++I + K PD
Sbjct: 38 GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQA 97
Query: 243 -KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
F+ E+ G P +Y L+ ++ + LF GV+PN +TY L
Sbjct: 98 LDVFKRMREIF--GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 302 MNAYRIEGQFSKAFHLQDEMTHKGFLPG-FVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
+ + +F KA +GFL + GF P +Y+ +I L G+ ++AL +
Sbjct: 156 IKMSCKKKEFEKA---------RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALEL 206
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL------------KVEVDENMISWLG 408
M E G++PD Y +I GF + ++ A EL V+ MIS L
Sbjct: 207 FDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLS 266
Query: 409 IWGLFEDTRKSLMQGLSNED-----TFSSLMN 435
G +D K + NE T+SSL++
Sbjct: 267 KCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 156/365 (42%), Gaps = 32/365 (8%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
P V+ G + NL ++ K+ A E+ + E+GV+ N TY+
Sbjct: 482 PTVVTYG--CLINLYTKVGKISKALEVSRVMKEEGVKHN----------------LKTYS 523
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
++ + + A + M + G+KP++I +N ++ CG G M M +
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDA 207
P RT+ +IH + G ++ +V M G P+V T+N LI L ++E A
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
V + MT +S + TY ++ + + D KAFE + ++G+ D TYE L+
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASV--GDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
+ C R+ A + +EM + N+ Y L++ + G +A L +M +G
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIR 387
P TY + I G A + M +G+ P+ +Y T+I G+ R
Sbjct: 762 PDI--------HTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS 813
Query: 388 EPGKA 392
P KA
Sbjct: 814 LPEKA 818
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 152/358 (42%), Gaps = 50/358 (13%)
Query: 76 RIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
R+R A + + Y +L+ AY +DEA+ +R M E G++ +L++++ +V G
Sbjct: 334 RMR-ARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKA 392
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM----IDS----- 186
G + + Y +I+ C + +A ++ EM ID+
Sbjct: 393 GHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIY 452
Query: 187 --------------------------GFSPSVATYNRLIRRL----RLEDAVGVFRGMTE 216
GF+P+V TY LI ++ A+ V R M E
Sbjct: 453 HTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 512
Query: 217 RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRL 276
+ ++ TY+ +I+ F KLK D AF + +MV +G+ PD Y +I C +
Sbjct: 513 EGVKHNLKTYSMMINGFVKLK--DWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 277 SEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSP 336
A +EM + P T+ +++ Y G ++ + D M G +P
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTV------ 624
Query: 337 SHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
T+N +I GL + E+A+ +L M G+S + +Y ++ G+ + + GKA+E
Sbjct: 625 --HTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 680
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 145/357 (40%), Gaps = 64/357 (17%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
+ Y ++ A+C ++ A ++R M E G+ + ++ ++ G
Sbjct: 415 SIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR 474
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR-LRLED 206
+ + P TY LI+L+ G KA +V M + G ++ TY+ +I ++L+D
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 207 ---AVGVFRGMTERDLSPDVVTYNTLISKFCKL--------------------------- 236
A VF M + + PDV+ YN +IS FC +
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 237 ------KEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
K D+ ++ E+ M G +P T+ LI L ++++ +A ++ EM G
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFH----LQDE------MTHKGFLPG----------- 329
VS N TYT +M Y G KAF LQ+E T++ L
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 330 -FVTGFSPSHVTYNAIIYGLCLLGRAE-----EALGVLRGMPEIGLSPDAVSYCTVI 380
S ++ N+ +Y + + G A EA +++ M + G+ PD +Y + I
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 154/373 (41%), Gaps = 34/373 (9%)
Query: 33 NVIIRGFTAVGNLQS------ESKKVGGAFELLKAGTEKGVESNSVSGRR----IREAEQ 82
+VI+ GF+ G+ ++ E+K++ G + + R +RE E+
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 83 --VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
+ Y+ ++ Y + + + + + E G P ++++ ++ G++
Sbjct: 443 EGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 502
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M ++ + + +TY+ +I+ F A V +M+ G P V YN +I
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 562
Query: 201 RL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
++ A+ + M + P T+ +I + K D+ ++ E+ M G
Sbjct: 563 AFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA--KSGDMRRSLEVFDMMRRCGC 620
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
+P T+ LI L ++++ +A ++ EM GVS N TYT +M Y G KAF
Sbjct: 621 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 680
Query: 317 ----LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
LQ+E G TY A++ C GR + AL V + M + +
Sbjct: 681 YFTRLQNE------------GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRN 728
Query: 373 AVSYCTVILGFCR 385
+ Y +I G+ R
Sbjct: 729 SFVYNILIDGWAR 741
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 128/314 (40%), Gaps = 20/314 (6%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T T+ ++ Y + ++ + M G P + +FN ++ GL K +M
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILD 648
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M ++ +E TYT ++ + G GKA + + + + G + TY L++
Sbjct: 649 EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG 708
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
R++ A+ V + M+ R++ + YN LI + + D+ +A ++ +M +G+ PD T
Sbjct: 709 RMQSALAVTKEMSARNIPRNSFVYNILIDGWAR--RGDVWEAADLIQQMKKEGVKPDIHT 766
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y I ++ A EM GV PN +TYT L+ + KA +EM
Sbjct: 767 YTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMK 826
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEA------LGVLRGMPEIGLSPDAVSY 376
G P Y+ ++ L EA + + + M E GL D +
Sbjct: 827 --------AMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTA 878
Query: 377 CTVILGFCRIREPG 390
C+I G
Sbjct: 879 VHWSKCLCKIEASG 892
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 113/277 (40%), Gaps = 31/277 (11%)
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR----LE 205
+K P + ++ + +G +AR+ M G +P+ Y LI ++
Sbjct: 302 EKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMD 361
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+A+ R M E + +VTY+ ++ F K + + +A+ +HK + +A Y
Sbjct: 362 EALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL--NASIYGK 419
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+I C + A L REM G+ Y +M+ Y + K + +
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE-- 477
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
GF+P+ VTY +I +G+ +AL V R M E G+ + +Y +I GF +
Sbjct: 478 ------CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 386 IREPGKAYELKVEVDENMISWLGIWGLFEDTRKSLMQ 422
+++ W + +FED K M+
Sbjct: 532 LKD-----------------WANAFAVFEDMVKEGMK 551
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 35 IIRGFTAVGN----------LQSESKKVG-GAFE-LLKAGTEKGVESNSVSGRRIREAEQ 82
I++G+ +VG+ LQ+E V +E LLKA + G ++++ + A
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+ + YN L+ + V EA +++ M + G+KP++ ++ + + G M
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M + P+ +TYT+LI + P KA EM G P A Y+ L+ L
Sbjct: 785 QTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 140/305 (45%), Gaps = 17/305 (5%)
Query: 91 NALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQ 150
NA + + RVD A+ R M + PN + N V+ G C G++ M +
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 151 KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLED 206
+ +Y +LI C+KG A K+ + M SG P+V T+N LI R ++L++
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
A VF M +++P+ VTYNTLI+ + ++ D E AF +MV GI D TY L
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYS--QQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
I LC Q + +A +E+ + + PN+ T++ L+ + + F L M
Sbjct: 385 IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIR--- 441
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
+G P+ T+N ++ C + A VLR M + D+ + V G +
Sbjct: 442 -----SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG---L 493
Query: 387 REPGK 391
+ GK
Sbjct: 494 KHQGK 498
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 6/240 (2%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T N ++ YC ++D+ + +L+ M G + +S+N ++ G C KG + M
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
+ L P+ T+ +LIH FC +A KV EM +P+ TYN LI ++
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
E A + M + D++TYN LI C K+ KA + E+ + ++P++ T+
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLC--KQAKTRKAAQFVKELDKENLVPNSSTFS 417
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI C+++ ++L++ M+R G PN +T+ L++A+ F A + EM +
Sbjct: 418 ALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 41/307 (13%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+++L + ++ A M + G P + S NA + L G+GR+ M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAV 208
+ ++P+ T ++ +C G K ++L +M GF R D
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF--------------RATD-- 273
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIR 268
V+YNTLI+ C+ + L A ++K M G+ P+ T+ LI
Sbjct: 274 ---------------VSYNTLIAGHCE--KGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 269 TLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
C +L EA +F EM V+PN TY L+N Y +G AF ++M
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV------ 370
Query: 329 GFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIRE 388
G +TYNA+I+GLC + +A ++ + + L P++ ++ +I+G C +
Sbjct: 371 --CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Query: 389 PGKAYEL 395
+ +EL
Sbjct: 429 ADRGFEL 435
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 158 RTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRG 213
R + SL F A +M D GF P+V + N + L R++ A+ +R
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 214 MTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQ 273
M +SP+ T N ++S +C+ L+K E+ +M G +Y LI C +
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCR--SGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEK 286
Query: 274 QRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTG 333
LS A L M + G+ PN T+ L++ F +A LQ+ K F
Sbjct: 287 GLLSSALKLKNMMGKSGLQPNVVTFNTLIHG------FCRAMKLQE--ASKVFGEMKAVN 338
Query: 334 FSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAY 393
+P+ VTYN +I G G E A M G+ D ++Y +I G C+ + KA
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 394 ELKVEVD-ENMI 404
+ E+D EN++
Sbjct: 399 QFVKELDKENLV 410
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 6/233 (2%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
L+ EKG+ S+++ + + + T+N L+ +C ++ EA + M
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
+ PN +++N ++ G +G M + D TY +LI C + KA
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 178 KVLSEMIDSGFSPSVATYNRLIR----RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
+ + E+ P+ +T++ LI R + +++ M P+ T+N L+S F
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM 286
C + D + A ++ EMV + I D+ T + L Q + L +EM
Sbjct: 459 C--RNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 27/197 (13%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNA 92
N +I GF LQ SK G +A V T TYN
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEM-----------------------KAVNVAPNTVTYNT 348
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ Y + A M G++ +++++NA++ GLC + + +++++
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAV 208
L P+ T+++LI C + + + ++ MI SG P+ T+N L+ R + A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 209 GVFRGMTERDLSPDVVT 225
V R M R + D T
Sbjct: 469 QVLREMVRRSIPLDSRT 485
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 140/305 (45%), Gaps = 17/305 (5%)
Query: 91 NALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQ 150
NA + + RVD A+ R M + PN + N V+ G C G++ M +
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 151 KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLED 206
+ +Y +LI C+KG A K+ + M SG P+V T+N LI R ++L++
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
A VF M +++P+ VTYNTLI+ + ++ D E AF +MV GI D TY L
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYS--QQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
I LC Q + +A +E+ + + PN+ T++ L+ + + F L M
Sbjct: 385 IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIR--- 441
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
+G P+ T+N ++ C + A VLR M + D+ + V G +
Sbjct: 442 -----SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG---L 493
Query: 387 REPGK 391
+ GK
Sbjct: 494 KHQGK 498
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 6/240 (2%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T N ++ YC ++D+ + +L+ M G + +S+N ++ G C KG + M
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
+ L P+ T+ +LIH FC +A KV EM +P+ TYN LI ++
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
E A + M + D++TYN LI C K+ KA + E+ + ++P++ T+
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLC--KQAKTRKAAQFVKELDKENLVPNSSTFS 417
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI C+++ ++L++ M+R G PN +T+ L++A+ F A + EM +
Sbjct: 418 ALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 41/307 (13%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+++L + ++ A M + G P + S NA + L G+GR+ M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAV 208
+ ++P+ T ++ +C G K ++L +M GF R D
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF--------------RATD-- 273
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIR 268
V+YNTLI+ C+ + L A ++K M G+ P+ T+ LI
Sbjct: 274 ---------------VSYNTLIAGHCE--KGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 269 TLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
C +L EA +F EM V+PN TY L+N Y +G AF ++M
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV------ 370
Query: 329 GFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIRE 388
G +TYNA+I+GLC + +A ++ + + L P++ ++ +I+G C +
Sbjct: 371 --CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Query: 389 PGKAYEL 395
+ +EL
Sbjct: 429 ADRGFEL 435
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 158 RTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRG 213
R + SL F A +M D GF P+V + N + L R++ A+ +R
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 214 MTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQ 273
M +SP+ T N ++S +C+ L+K E+ +M G +Y LI C +
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCR--SGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEK 286
Query: 274 QRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTG 333
LS A L M + G+ PN T+ L++ F +A LQ+ K F
Sbjct: 287 GLLSSALKLKNMMGKSGLQPNVVTFNTLIHG------FCRAMKLQE--ASKVFGEMKAVN 338
Query: 334 FSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAY 393
+P+ VTYN +I G G E A M G+ D ++Y +I G C+ + KA
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 394 ELKVEVD-ENMI 404
+ E+D EN++
Sbjct: 399 QFVKELDKENLV 410
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 6/233 (2%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
L+ EKG+ S+++ + + + T+N L+ +C ++ EA + M
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
+ PN +++N ++ G +G M + D TY +LI C + KA
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 178 KVLSEMIDSGFSPSVATYNRLIR----RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
+ + E+ P+ +T++ LI R + +++ M P+ T+N L+S F
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM 286
C + D + A ++ EMV + I D+ T + L Q + L +EM
Sbjct: 459 C--RNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 27/197 (13%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNA 92
N +I GF LQ SK G +A V T TYN
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEM-----------------------KAVNVAPNTVTYNT 348
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ Y + A M G++ +++++NA++ GLC + + +++++
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAV 208
L P+ T+++LI C + + + ++ MI SG P+ T+N L+ R + A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 209 GVFRGMTERDLSPDVVT 225
V R M R + D T
Sbjct: 469 QVLREMVRRSIPLDSRT 485
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 16/315 (5%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLK-PNLISFNAVVQGLCGKGRMXXXXXXX 145
T +N LV +C + ++ A ++ M G+ PN I+++ ++ L R
Sbjct: 196 TCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELF 255
Query: 146 XXMNQKD-LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL-- 202
M K+ ++PD T+ +I+ FC G +A+K+L M +G +P+V Y+ L+
Sbjct: 256 EDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCK 315
Query: 203 --RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
++++A F + + L D V Y TL++ FC+ E D +A ++ EM D
Sbjct: 316 VGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETD--EAMKLLGEMKASRCRADT 373
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
TY ++R L + R EA + + GV N +Y ++NA G+ KA
Sbjct: 374 LTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSV 433
Query: 321 MTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
M+ +G P H T+N ++ LC G E + VL G IGL P S+ V+
Sbjct: 434 MSERGIWP--------HHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVV 485
Query: 381 LGFCRIREPGKAYEL 395
C+ R+ +EL
Sbjct: 486 ESICKERKLVHVFEL 500
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 21/264 (7%)
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFS-PSVATYNRLIRRL----RLEDA 207
L P+ + L+ C G A V+ EM SG S P+ TY+ L+ L R ++A
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 208 VGVFRGMTERD-LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
V +F M ++ +SPD VT+N +I+ FC+ E +E+A ++ M G P+ Y L
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGE--VERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
+ C ++ EA F E+ + G+ + YT LMN + G+ +A L EM
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK---- 365
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
+ +TYN I+ GL GR+EEAL +L G+ + SY ++ C
Sbjct: 366 ----ASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCN 421
Query: 387 REPGKAYELKVEVDENMISWLGIW 410
E KA + +++S GIW
Sbjct: 422 GELEKAVKFL-----SVMSERGIW 440
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 6/246 (2%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
E + + T+N ++ +C V+ A IL M + G PN+ +++A++ G C G++
Sbjct: 262 EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQE 321
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
+ + L D YT+L++ FC G +A K+L EM S TYN ++R
Sbjct: 322 AKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILR 381
Query: 201 RL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
L R E+A+ + + + +Y +++ C +LEKA + + M +GI
Sbjct: 382 GLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC--CNGELEKAVKFLSVMSERGI 439
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
P T+ L+ LC + LR G+ P +++ ++ + E + F
Sbjct: 440 WPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFE 499
Query: 317 LQDEMT 322
L D +
Sbjct: 500 LLDSLV 505
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS-PNNETYTGLMNAYRIEGQFSK 313
G+ P+ + L++ C ++ A+ + EM R G+S PN+ TY+ LM+ + +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 314 AFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
A L ++M K G SP VT+N +I G C G E A +L M + G +P+
Sbjct: 251 AVELFEDMISK-------EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNV 303
Query: 374 VSYCTVILGFCRIREPGKAYELKVEVDE 401
+Y ++ GFC++ GK E K DE
Sbjct: 304 YNYSALMNGFCKV---GKIQEAKQTFDE 328
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 142/313 (45%), Gaps = 15/313 (4%)
Query: 78 REAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGR 137
+E+ + T N LV A C ++ A +L + GL PNL+++ ++ G +G
Sbjct: 182 KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGD 241
Query: 138 MXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNR 197
M M + PD TYT L+ +C G +A V+ +M + P+ TY
Sbjct: 242 MESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGV 301
Query: 198 LIRRLRLE----DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH 253
+IR L E +A +F M ER PD +I C ++ +++A + +M+
Sbjct: 302 MIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALC--EDHKVDEACGLWRKMLK 359
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK 313
+PD LI LC + R++EA LF E + G P+ TY L+ +G+ ++
Sbjct: 360 NNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTE 418
Query: 314 AFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
A L D+M + P+ TYN +I GL G +E + VL M EIG P+
Sbjct: 419 AGRLWDDMYER--------KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNK 470
Query: 374 VSYCTVILGFCRI 386
++ + G ++
Sbjct: 471 TTFLILFEGLQKL 483
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 24/298 (8%)
Query: 77 IREAEQVVDET---------TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNA 127
I A +V+DE TY ++ Y ++ A +L M +RG P+ ++
Sbjct: 207 IESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTV 266
Query: 128 VVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG 187
++ G C GR M + ++ P+E TY +I C + G+AR + EM++
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERS 326
Query: 188 FSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEK 243
F P + ++I L ++++A G++R M + + PD +TLI CK E + +
Sbjct: 327 FMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCK--EGRVTE 384
Query: 244 AFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMN 303
A ++ E KG +P TY LI +C + L+EA L+ +M PN TY L+
Sbjct: 385 ARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIE 443
Query: 304 AYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVL 361
G + + +EM G P + T+ + GL LG+ E+A+ ++
Sbjct: 444 GLSKNGNVKEGVRVLEEMLEIGCFP--------NKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 187 GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
G +P++ T N L++ L +E A V + L P++VTY T++ + + D+E
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGY--VARGDME 243
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
A + EM+ +G PDA TY L+ C R SEA + +M + + PN TY ++
Sbjct: 244 SAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI 303
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
A E + +A ++ DEM + F+P +I LC + +EA G+ R
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMP--------DSSLCCKVIDALCEDHKVDEACGLWR 355
Query: 363 GMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
M + PD T+I C+ G+ E + DE
Sbjct: 356 KMLKNNCMPDNALLSTLIHWLCK---EGRVTEARKLFDE 391
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 9/190 (4%)
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
R E ++ +F + + + V + NTL++ + + DL A K GI P+ T
Sbjct: 135 RYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAM-FKNSKESFGITPNIFT 193
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
L++ LC + + AY + E+ G+ PN TYT ++ Y G A + +EM
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
+G+ P TY ++ G C LGR EA V+ M + + P+ V+Y +I
Sbjct: 254 DRGWYP--------DATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 383 FCRIREPGKA 392
C+ ++ G+A
Sbjct: 306 LCKEKKSGEA 315
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR-WGVSPNNETYTGLMNAYRIEGQFSK 313
G+ + L+ L QR + +F+ +G++PN T L+ A +
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209
Query: 314 AFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
A+ + DE+ G +P VT Y I+ G G E A VL M + G PDA
Sbjct: 210 AYKVLDEIPSMGLVPNLVT--------YTTILGGYVARGDMESAKRVLEEMLDRGWYPDA 261
Query: 374 VSYCTVILGFCRIREPGKAYELKVEVDENMI 404
+Y ++ G+C++ +A + ++++N I
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEI 292
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 149/326 (45%), Gaps = 26/326 (7%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+T TYN ++ C DEA L M + G+ P+ +S+N ++ G C G
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
+++ +L T+T L+ + + +A + +M+ SGF P V T++ +I RL
Sbjct: 220 DEISELNLI----THTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKG 272
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
++ + + R M E + P+ VTY TL+ K A + ++MV +GI D
Sbjct: 273 GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL--FKANIYRHALALYSQMVVRGIPVDLV 330
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
Y L+ L L EA F+ +L PN TYT L++ G S A + +M
Sbjct: 331 VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM 390
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
K +P VT Y+++I G G EEA+ +LR M + + P+ +Y TVI
Sbjct: 391 LEKSVIPNVVT--------YSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID 442
Query: 382 GFCRIREPGKAYELKVE-----VDEN 402
G + + A EL E V+EN
Sbjct: 443 GLFKAGKEEMAIELSKEMRLIGVEEN 468
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 176/392 (44%), Gaps = 39/392 (9%)
Query: 17 KLLRLS---TCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS 73
K+ RLS + LRNR+ + + T + L E A++ L + G+ ++VS
Sbjct: 141 KVGRLSFAISLLRNRVISIDTVTYN-TVISGL-CEHGLADEAYQFLSEMVKMGILPDTVS 198
Query: 74 -----------GRRIREAEQVVDETT-----TYNALVLAYCCDERVDEAMGILRCMTERG 117
G +R A+ +VDE + T+ L+ +Y ++EA R M G
Sbjct: 199 YNTLIDGFCKVGNFVR-AKALVDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSG 254
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
P++++F++++ LC G++ M + + P+ TYT+L+ A
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHAL 314
Query: 178 KVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
+ S+M+ G + Y L+ L L +A F+ + E + P+VVTY L+
Sbjct: 315 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 374
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
CK DL A + +M+ K ++P+ TY +I + L EA L R+M V P
Sbjct: 375 CK--AGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVP 432
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
N TY +++ G+ A L EM + G ++ +A++ L +GR
Sbjct: 433 NGFTYGTVIDGLFKAGKEEMAIELSKEMR--------LIGVEENNYILDALVNHLKRIGR 484
Query: 354 AEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
+E G+++ M G++ D ++Y ++I F +
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 148/361 (40%), Gaps = 44/361 (12%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNA 92
NV+I G G KVG + K EKG+E + T+N
Sbjct: 543 NVLISGMLKFG-------KVGADWAY-KGMREKGIEP----------------DIATFNI 578
Query: 93 LVLAYCCDERVDEAMGILRC---MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
++ + + ++ GIL+ M G+KP+L+S N VV LC G+M M
Sbjct: 579 MMNS---QRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
++ P+ TY + K ++ G S YN LI L +
Sbjct: 636 LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTK 695
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A V M R PD VT+N+L+ + + KA + M+ GI P+ TY
Sbjct: 696 KAAMVMGDMEARGFIPDTVTFNSLMHGY--FVGSHVRKALSTYSVMMEAGISPNVATYNT 753
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+IR L + E EM G+ P++ TY L++ G + + EM G
Sbjct: 754 IIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADG 813
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
+P TYN +I +G+ +A +L+ M + G+SP+ +YCT+I G C+
Sbjct: 814 LVP--------KTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Query: 386 I 386
+
Sbjct: 866 L 866
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 145/334 (43%), Gaps = 42/334 (12%)
Query: 83 VVDETTTYNALVLAYCCDERV-DEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
VV ++ +N+L+ + + V D+ I M G+ P++ + N ++ C GR+
Sbjct: 89 VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 148
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
+ + ++ D TY ++I C+ G +A + LSEM+ G P +YN LI
Sbjct: 149 ISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDG 205
Query: 202 LRLEDAVGVF---RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
VG F + + + +++T+ L+S + L +E+A+ +MV G P
Sbjct: 206 FC---KVGNFVRAKALVDEISELNLITHTILLSSYYNLHA--IEEAYR---DMVMSGFDP 257
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
D T+ +I LC ++ E L REM V PN+ TYT L+++ + A L
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 317
Query: 319 DEMTHKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCLL 351
+M +G V P+ VTY A++ GLC
Sbjct: 318 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 377
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
G A ++ M E + P+ V+Y ++I G+ +
Sbjct: 378 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 143/309 (46%), Gaps = 17/309 (5%)
Query: 74 GRRIREAEQ--VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQG 131
G +RE E+ V TY LV + A+ + M RG+ +L+ + ++ G
Sbjct: 279 GLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDG 338
Query: 132 LCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPS 191
L G + + + + P+ TYT+L+ C G A ++++M++ P+
Sbjct: 339 LFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Query: 192 VATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM 247
V TY+ +I ++ LE+AV + R M ++++ P+ TY T+I K + E A E+
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE--EMAIEL 456
Query: 248 KAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRI 307
EM G+ + + L+ L R+ E L ++M+ GV+ + YT L++ +
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Query: 308 EGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEI 367
G A +EM +G +P V V+YN +I G+ G+ A +GM E
Sbjct: 517 GGDEEAALAWAEEMQERG-MPWDV-------VSYNVLISGMLKFGKV-GADWAYKGMREK 567
Query: 368 GLSPDAVSY 376
G+ PD ++
Sbjct: 568 GIEPDIATF 576
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 150/359 (41%), Gaps = 51/359 (14%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL--CGK--- 135
+ V+ TY++++ Y ++EA+ +LR M ++ + PN ++ V+ GL GK
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452
Query: 136 ------------------------------GRMXXXXXXXXXMNQKDLAPDERTYTSLIH 165
GR+ M K + D+ YTSLI
Sbjct: 453 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 166 LFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVG---VFRGMTERDLSPD 222
+F G A EM + G V +YN LI + VG ++GM E+ + PD
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPD 572
Query: 223 VVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDL 282
+ T+N +++ + K+ D E ++ +M GI P + ++ LC ++ EA +
Sbjct: 573 IATFNIMMNS--QRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHI 630
Query: 283 FREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYN 342
+M+ + PN TY ++ + F TH+ L G S YN
Sbjct: 631 LNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFK-----THETLLS---YGIKLSRQVYN 682
Query: 343 AIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF---CRIREPGKAYELKVE 398
+I LC LG ++A V+ M G PD V++ +++ G+ +R+ Y + +E
Sbjct: 683 TLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 38/241 (15%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
EA + +T T+N+L+ Y V +A+ M E G+ PN+ ++N +++GL G +
Sbjct: 705 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLI 764
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M + + PD+ TY +LI G+ + + EMI G P +TYN L
Sbjct: 765 KEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 824
Query: 199 IRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL-KEPDLEKAFEMKAEMVH 253
I ++ A + + M +R +SP+ TY T+IS CKL PD+E + KA
Sbjct: 825 ISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVE--WNKKA---- 878
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREML-RWGVSPNNETYTGLMNAYRIEGQFS 312
L+EA L +EM+ G P N+T Y I FS
Sbjct: 879 --------------------MYLAEAKGLLKEMVEEKGYIPCNQT------IYWISAAFS 912
Query: 313 K 313
K
Sbjct: 913 K 913
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 173/441 (39%), Gaps = 57/441 (12%)
Query: 18 LLRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGG---AFELLKAGTEKGVESNSV-- 72
+L + L ++ NV+ GFT G + K G A EL K GVE N+
Sbjct: 414 MLEEAVSLLRKMEDQNVVPNGFT-YGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYIL 472
Query: 73 --------SGRRIREAEQVVDETTT---------YNALVLAYCCDERVDEAMGILRCMTE 115
RI+E + +V + + Y +L+ + + A+ M E
Sbjct: 473 DALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQE 532
Query: 116 RGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGK 175
RG+ +++S+N ++ G+ G++ M +K + PD T+ +++ +G
Sbjct: 533 RGMPWDVVSYNVLISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEG 591
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
K+ +M G PS+ + N ++ L ++E+A+ + M ++ P++ TY +
Sbjct: 592 ILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLD 651
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
K K D F+ ++ GI Y LI TLC +A + +M G
Sbjct: 652 TSSKHKRAD--AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT------------------- 332
P+ T+ LM+ Y + KA M G P T
Sbjct: 710 IPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDK 769
Query: 333 --------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G P TYNA+I G +G + ++ + M GL P +Y +I F
Sbjct: 770 WLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFA 829
Query: 385 RIREPGKAYELKVEVDENMIS 405
+ + +A EL E+ + +S
Sbjct: 830 NVGKMLQARELLKEMGKRGVS 850
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 130/311 (41%), Gaps = 50/311 (16%)
Query: 105 EAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLI 164
EA + + E PN++++ A+V GLC G + M +K + P+ TY+S+I
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 165 HLFCDKGHPGKARKVLSEMIDSGFSPSVATY----------------------------- 195
+ + KG +A +L +M D P+ TY
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 466
Query: 196 ----------NRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF 245
N L R R+++ G+ + M + ++ D + Y +LI F K D E A
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVF--FKGGDEEAAL 524
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY 305
EM +G+ D +Y LI + ++ + ++ M G+ P+ T+ +MN+
Sbjct: 525 AWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQ 583
Query: 306 RIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMP 365
R +G L D+M G PS ++ N ++ LC G+ EEA+ +L M
Sbjct: 584 RKQGDSEGILKLWDKMKS--------CGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 366 EIGLSPDAVSY 376
+ + P+ +Y
Sbjct: 636 LMEIHPNLTTY 646
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 28/254 (11%)
Query: 199 IRRLRLEDAVGVFRGMTERDLSPDVVTYNT--LISKFCKLKE-----PDLEKAFEMKAEM 251
I+R ++ ++ +T+R PD+ T +S F L L A + M
Sbjct: 25 IKRPQIPESEETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAM 84
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDL-FREMLRWGVSPNNETYTGLMNAYRIEGQ 310
G++PD+ + LI + + + L + +M+ GVSP+ L++++ G+
Sbjct: 85 CTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGR 144
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
S A L S VTYN +I GLC G A+EA L M ++G+
Sbjct: 145 LSFAISLLRNRV-----------ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 193
Query: 371 PDAVSYCTVILGFCRIREPGKAYELKVEVDE-NMI-------SWLGIWGLFEDTRKSLMQ 422
PD VSY T+I GFC++ +A L E+ E N+I S+ + + E R +M
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMS 253
Query: 423 GLSNE-DTFSSLMN 435
G + TFSS++N
Sbjct: 254 GFDPDVVTFSSIIN 267
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 128/284 (45%), Gaps = 14/284 (4%)
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGH 172
M + G++P++++ +++V G C + M + + D T LI C
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNT 228
A +VL M D G SP+V TY+ LI L RL DA M + ++P+V+T++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 229 LISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
LI + K L K + M+ I P+ TY LI LC+ R+ EA + M+
Sbjct: 124 LIDAYA--KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGL 348
G +PN TY+ L N + + L D+M + G + + V+ N +I G
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR--------GVAANTVSCNTLIKGY 233
Query: 349 CLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKA 392
G+ + ALGV M GL P+ SY V+ G E KA
Sbjct: 234 FQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 277
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 14/314 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ T ++LV +C + +A+ + M + G+K +++ ++ LC +
Sbjct: 12 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 71
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RR 201
M + ++P+ TY+SLI C G A + L EM +P+V T++ LI +R
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 131
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+L V++ M + + P+V TY++LI C D +A +M M+ KG P+
Sbjct: 132 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVD--EAIKMLDLMISKGCTPNVV 189
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
TY L R+ + L +M + GV+ N + L+ Y G+ A + M
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
T G +P +YN ++ GL G E+AL M + D ++Y +I
Sbjct: 250 TSNGLIPNI--------RSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH 301
Query: 382 GFCRIREPGKAYEL 395
G C+ +AY+L
Sbjct: 302 GMCKACMVKEAYDL 315
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 14/292 (4%)
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ C + V A+ +L+ M +RG+ PN++++++++ GLC GR+ M+ K
Sbjct: 54 LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK 113
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAV 208
+ P+ T+++LI + +G K V MI P+V TY+ LI L R+++A+
Sbjct: 114 INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAI 173
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIR 268
+ M + +P+VVTY+TL + F K ++ ++ +M +G+ + + LI+
Sbjct: 174 KMLDLMISKGCTPNVVTYSTLANGF--FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Query: 269 TLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
++ A +F M G+ PN +Y ++ G+ KA + M
Sbjct: 232 GYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK----- 286
Query: 329 GFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
T +TY +I+G+C +EA + + + PD +Y +I
Sbjct: 287 ---TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 127/280 (45%), Gaps = 22/280 (7%)
Query: 55 AFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMT 114
A E+LK ++G+ N V TY++L+ C R+ +A L M
Sbjct: 67 ALEVLKRMKDRGISPNVV----------------TYSSLITGLCKSGRLADAERRLHEMD 110
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
+ + PN+I+F+A++ +G++ M Q + P+ TY+SLI+ C
Sbjct: 111 SKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVD 170
Query: 175 KARKVLSEMIDSGFSPSVATY----NRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLI 230
+A K+L MI G +P+V TY N + R++D + + M +R ++ + V+ NTLI
Sbjct: 171 EAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLI 230
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
+ + + DL A + M G++P+ +Y ++ L + +A F M +
Sbjct: 231 KGYFQAGKIDL--ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTR 288
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGF 330
+ TYT +++ +A+ L ++ K P F
Sbjct: 289 NDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDF 328
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 72/198 (36%), Gaps = 62/198 (31%)
Query: 250 EMVHKGILPDADTYEPLIRTLCLQQRLSEAY----------------------------- 280
+M+ GI PD T L+ CL + +A
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 281 ------DLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT-- 332
++ + M G+SPN TY+ L+ G+ + A EM K P +T
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 333 -------------------------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEI 367
P+ TY+++IYGLC+ R +EA+ +L M
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 368 GLSPDAVSYCTVILGFCR 385
G +P+ V+Y T+ GF +
Sbjct: 183 GCTPNVVTYSTLANGFFK 200
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 18/171 (10%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
PNV+ ++ + N +S +V +LL ++GV +N+VS N
Sbjct: 186 PNVVT--YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC----------------N 227
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
L+ Y ++D A+G+ MT GL PN+ S+N V+ GL G + M +
Sbjct: 228 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKT 287
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
D TYT +IH C +A + ++ P Y +I L
Sbjct: 288 RNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAEL 338
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 7/213 (3%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY + + +C + VD A + + MT+ G N +S+ ++ GL ++ M
Sbjct: 192 TYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKM 251
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
+ P+ RTYT LI C G +A + +M +SG P Y LI+ L
Sbjct: 252 KDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTL 311
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
++A G+ M E L P+V+TYN LI FCK ++ KA + ++M+ + ++PD TY
Sbjct: 312 DEASGLLEHMLENGLMPNVITYNALIKGFCK---KNVHKAMGLLSKMLEQNLVPDLITYN 368
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNET 297
LI C L AY L M G+ PN T
Sbjct: 369 TLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 15/282 (5%)
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+N ++ L G + M + ++PD T+ +L++ +C G+ +A++ ++ +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 185 DSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
+G P TY I RR ++ A VF+ MT+ + V+Y LI + K+ D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
+A + +M P+ TY LI LC + SEA +LF++M G+ P++ YT
Sbjct: 243 --EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTV 300
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
L+ ++ +A L + M G +P +TYNA+I G C +A+G+
Sbjct: 301 LIQSFCSGDTLDEASGLLEHMLENGLMPNV--------ITYNALIKGFC-KKNVHKAMGL 351
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
L M E L PD ++Y T+I G C AY L ++E+
Sbjct: 352 LSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEES 393
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 121/274 (44%), Gaps = 15/274 (5%)
Query: 103 VDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTS 162
V+E + M E + P++ +FN +V G C G + + Q PD TYTS
Sbjct: 136 VEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTS 195
Query: 163 LIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERD 218
I C + A KV EM +G + +Y +LI L ++++A+ + M + +
Sbjct: 196 FITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDN 255
Query: 219 LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE 278
P+V TY LI C + +A + +M GI PD Y LI++ C L E
Sbjct: 256 CCPNVRTYTVLIDALCGSGQK--SEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDE 313
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSH 338
A L ML G+ PN TY L+ + + KA L +M + +P
Sbjct: 314 ASGLLEHMLENGLMPNVITYNALIKGF-CKKNVHKAMGLLSKMLEQNLVPDL-------- 364
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
+TYN +I G C G + A +L M E GL P+
Sbjct: 365 ITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 50 KKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGI 109
K+V AF++ K T+ G N VS Y L+ +++DEA+ +
Sbjct: 204 KEVDAAFKVFKEMTQNGCHRNEVS----------------YTQLIYGLFEAKKIDEALSL 247
Query: 110 LRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCD 169
L M + PN+ ++ ++ LCG G+ M++ + PD+ YT LI FC
Sbjct: 248 LVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCS 307
Query: 170 KGHPGKARKVLSEMIDSGFSPSVATYNRLIR---RLRLEDAVGVFRGMTERDLSPDVVTY 226
+A +L M+++G P+V TYN LI+ + + A+G+ M E++L PD++TY
Sbjct: 308 GDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNLVPDLITY 367
Query: 227 NTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
NTLI+ C +L+ A+ + + M G++P+ T
Sbjct: 368 NTLIAGQC--SSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 18/247 (7%)
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN-RLIRRLRLEDAVGVFRGMTER 217
+Y SL+ L C + P + K+ MI S S A + R +R D+ + +T +
Sbjct: 62 SYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPK 121
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
YN L+S + +E+ + EM+ + PD T+ L+ C +
Sbjct: 122 -------CYNNLLSSLARFGL--VEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVV 172
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
EA +++ G P+ TYT + + + AF + EMT G +
Sbjct: 173 EAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGC--------HRN 224
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKV 397
V+Y +IYGL + +EAL +L M + P+ +Y +I C + +A L
Sbjct: 225 EVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFK 284
Query: 398 EVDENMI 404
++ E+ I
Sbjct: 285 QMSESGI 291
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 145/329 (44%), Gaps = 28/329 (8%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
++ +NAL+ +C R+ EA +LR + G L +++++ GL R
Sbjct: 267 DSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELY 326
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M +K++ PD YT LI G A K+LS M G SP YN +I+ L
Sbjct: 327 ANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR 386
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
LE+ + M+E + PD T+ LI C + + +A E+ E+ G P
Sbjct: 387 GLLEEGRSLQLEMSETESFPDACTHTILICSMC--RNGLVREAEEIFTEIEKSGCSPSVA 444
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREM---------LRWGVSPNNETYTGLMNAYRIEGQFS 312
T+ LI LC L EA L +M LR S N ++ ++ + I +
Sbjct: 445 TFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHS-GNRSFDTMVESGSILKAYR 503
Query: 313 KAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
H D TG SP V+YN +I G C G + AL +L + GLSPD
Sbjct: 504 DLAHFAD------------TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPD 551
Query: 373 AVSYCTVILGFCRIREPGKAYELKVEVDE 401
+V+Y T+I G R+ +A++L D+
Sbjct: 552 SVTYNTLINGLHRVGREEEAFKLFYAKDD 580
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 157/404 (38%), Gaps = 78/404 (19%)
Query: 63 TEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDE-AMGILRCMTERGLKPN 121
EK VES R++E + D TYN ++ +E A + M + PN
Sbjct: 143 AEKAVESFG----RMKEFDCRPD-VFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPN 197
Query: 122 LISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLS 181
L +F ++ GL KGR M + ++P+ TYT LI C +G ARK+
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFY 257
Query: 182 EMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLK 237
EM SG P +N L+ R+ +A + R + + Y++LI + +
Sbjct: 258 EMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRAR 317
Query: 238 EPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNET 297
+AFE+ A M+ K I PD Y LI+ L ++ +A L M G+SP+
Sbjct: 318 R--YTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 298 YTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP---------------GFV----------- 331
Y ++ A G + LQ EM+ P G V
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIE 435
Query: 332 -TGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGM-------------------------- 364
+G SPS T+NA+I GLC G +EA +L M
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES 495
Query: 365 -------------PEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+ G SPD VSY +I GFCR + A +L
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 179/436 (41%), Gaps = 89/436 (20%)
Query: 36 IRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVL 95
+RG++++ + +++ AFEL +K ++ + + Y L+
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDII----------------LYTILIQ 346
Query: 96 AYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAP 155
++++A+ +L M +G+ P+ +NAV++ LCG+G + M++ + P
Sbjct: 347 GLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFP 406
Query: 156 DERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDA---- 207
D T+T LI C G +A ++ +E+ SG SPSVAT+N LI L L++A
Sbjct: 407 DACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466
Query: 208 ----VG---------------VFRGMTE--------RDL--------SPDVVTYNTLISK 232
VG F M E RDL SPD+V+YN LI+
Sbjct: 467 HKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLING 526
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
FC + D++ A ++ + KG+ PD+ TY LI L R EA+ LF + S
Sbjct: 527 FC--RAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHS 584
Query: 293 PNNETYTGLMN----------AYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVT-- 340
P Y LM A+ + ++ K D+ T F G + +
Sbjct: 585 P--AVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRL 642
Query: 341 --------------YNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
Y + GLC GR EAL V + E + S +I G C+
Sbjct: 643 IELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKR 702
Query: 387 REPGKAYELKVEVDEN 402
+ A E+ + +N
Sbjct: 703 EQLDAAIEVFLYTLDN 718
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 141/322 (43%), Gaps = 15/322 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX-XX 144
++ + L+ AY ++A+ M E +P++ ++N +++ + +
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----R 200
M + + +P+ T+ L+ KG A+K+ +M G SP+ TY LI +
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245
Query: 201 RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
R +DA +F M PD V +N L+ FCKL + +AFE+ G +
Sbjct: 246 RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR--MVEAFELLRLFEKDGFVLGL 303
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
Y LI L +R ++A++L+ ML+ + P+ YT L+ G+ A L
Sbjct: 304 RGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSS 363
Query: 321 MTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
M KG SP YNA+I LC G EE + M E PDA ++ +I
Sbjct: 364 MPSKGI--------SPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 381 LGFCRIREPGKAYELKVEVDEN 402
CR +A E+ E++++
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKS 437
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 151/345 (43%), Gaps = 23/345 (6%)
Query: 93 LVLAYCC---DERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
++L++ C D + +L M GL+P+ ++ + V+ LC GR+ +
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS-GFSPSVATYNRLIRRL----RL 204
+K PD TY L+ C + + EM D P + ++ LI + L
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+A+ + + PD YNT++ FC L + +A + +M +G+ PD TY
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG--SEAVGVYKKMKEEGVEPDQITYN 304
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI L R+ EA + M+ G P+ TYT LMN +G+ A L +EM +
Sbjct: 305 TLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEAR 364
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G +P+ TYN +++GLC ++ + + M G+ ++ Y T++
Sbjct: 365 --------GCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLV 416
Query: 385 RIREPGKAYEL-KVEVDENMISWLGIWGLFEDT----RKSLMQGL 424
+ + +AYE+ VD +S + E T +K+ QGL
Sbjct: 417 KSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKEQGL 461
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 17/259 (6%)
Query: 149 NQKDLAPDERTYTSLIHLFC--DKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
+Q + P T+ L+ C +VL+ M+++G P T + +R L
Sbjct: 114 SQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETG 173
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK-GILPDAD 261
R+++A + + +TE+ PD TYN L+ CK K DL +E EM + PD
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK--DLHVVYEFVDEMRDDFDVKPDLV 231
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
++ LI +C + L EA L ++ G P+ Y +M + + S+A + +M
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+G P +TYN +I+GL GR EEA L+ M + G PD +Y +++
Sbjct: 292 KEEGV--------EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Query: 382 GFCRIREPGKAYELKVEVD 400
G CR E A L E++
Sbjct: 344 GMCRKGESLGALSLLEEME 362
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 135/300 (45%), Gaps = 16/300 (5%)
Query: 85 DETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXX 144
D+ TT + V + C RVDEA +++ +TE+ P+ ++N +++ LC +
Sbjct: 158 DQVTT-DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 145 XXXMNQK-DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL- 202
M D+ PD ++T LI C+ + +A ++S++ ++GF P YN +++
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 203 ---RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+ +AVGV++ M E + PD +TYNTLI F K +E+A MV G PD
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLI--FGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
TY L+ +C + A L EM G +PN+ TY L++ K L +
Sbjct: 335 TATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
M +G Y ++ L G+ EA V + DA +Y T+
Sbjct: 395 MMKS--------SGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 6/211 (2%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
+R+ V + ++ L+ C + + EAM ++ + G KP+ +N +++G C
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
+ M ++ + PD+ TY +LI G +AR L M+D+G+ P ATY
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 197 RLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV 252
L+ R+ A+ + M R +P+ TYNTL+ CK + ++K E+ M
Sbjct: 340 SLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL--MDKGMELYEMMK 397
Query: 253 HKGILPDADTYEPLIRTLCLQQRLSEAYDLF 283
G+ +++ Y L+R+L +++EAY++F
Sbjct: 398 SSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNA 92
N I++GF + S+ + G ++ +K E+GVE + + TYN
Sbjct: 269 NTIMKGFCTL----SKGSEAVGVYKKMK---EEGVEPDQI----------------TYNT 305
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ RV+EA L+ M + G +P+ ++ +++ G+C KG M +
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG 365
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAV 208
AP++ TY +L+H C K ++ M SG Y L+R L ++ +A
Sbjct: 366 CAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAY 425
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKE 238
VF + D Y+TL + LK+
Sbjct: 426 EVFDYAVDSKSLSDASAYSTLETTLKWLKK 455
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 143/323 (44%), Gaps = 25/323 (7%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDE---------AMGILRCMTERGLKPNLISFNA 127
+REA Q + + L + C++ + + ++ L + RG P+ SFN+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 128 VVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS- 186
VV +C G++ M + PD +Y SLI C G A VL + S
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 187 GF--SPSVATYNRLIR---RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
GF P + ++N L ++++ D V V+ G+ + SP+VVTY+T I FCK E L
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGE--L 179
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
+ A + M + P+ T+ LI C L A L++EM R +S N TYT L
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 302 MNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVL 361
++ + +G+ +A + M P+ + Y II G G ++ A+ L
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVED--------RVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 362 RGMPEIGLSPDAVSYCTVILGFC 384
M G+ D +Y +I G C
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLC 314
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 176/395 (44%), Gaps = 48/395 (12%)
Query: 86 ETTTYNALVLAYCCDERVDEA---MGI-LRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
+ ++N+L + + +DE MG+ L+C + PN+++++ + C G +
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCS-----PNVVTYSTWIDTFCKSGELQLA 182
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI-- 199
M + L+P+ T+T LI +C G A + EM S +V TY LI
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242
Query: 200 --RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
++ ++ A ++ M E + P+ + Y T+I F + D + A + A+M+++G+
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF--FQRGDSDNAMKFLAKMLNQGMR 300
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
D Y +I LC +L EA ++ +M + + P+ +T +MNAY G+ A ++
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 318 QDEMTHKGFLPGFVT------GFSPSHVTYNAIIY----------------GLCLLGRAE 355
++ +GF P V G + + + AI+Y LC G
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE-----NMISWLG-I 409
E + + E GL PD Y + I G C+ A++LK + + +++++ I
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 410 WGLFEDTRKSLMQGLSNEDTFSSLMNDYLAQDESV 444
+GL K LM + F ++N ++ D +V
Sbjct: 481 YGL---ASKGLM--VEARQVFDEMLNSGISPDSAV 510
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 136/331 (41%), Gaps = 44/331 (13%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T+ L+ YC ++ A+ + + M + N++++ A++ G C KG M
Sbjct: 198 VVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYS 257
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M + + P+ YT++I F +G A K L++M++ G + Y +I L
Sbjct: 258 RMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNG 317
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
+L++A + M + DL PD+V + T+++ + K ++ A M +++ +G PD
Sbjct: 318 KLKEATEIVEDMEKSDLVPDMVIFTTMMNAY--FKSGRMKAAVNMYHKLIERGFEPDVVA 375
Query: 263 ------------------------------YEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
Y LI LC + E LF ++ G+
Sbjct: 376 LSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLV 435
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
P+ YT + +G AF L+ M +G L + Y +IYGL G
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLA--------YTTLIYGLASKG 487
Query: 353 RAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
EA V M G+SPD+ + +I +
Sbjct: 488 LMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 36/260 (13%)
Query: 104 DEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSL 163
D AM L M +G++ ++ ++ ++ GLCG G++ M + DL PD +T++
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 164 IHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAV----------- 208
++ + G A + ++I+ GF P V + +I + +L +A+
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV 404
Query: 209 -------------------GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKA 249
+F ++E L PD Y + I+ C K+ +L AF++K
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLC--KQGNLVDAFKLKT 462
Query: 250 EMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEG 309
MV +G+L D Y LI L + + EA +F EML G+SP++ + L+ AY EG
Sbjct: 463 RMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522
Query: 310 QFSKAFHLQDEMTHKGFLPG 329
+ A L +M +G +
Sbjct: 523 NMAAASDLLLDMQRRGLVTA 542
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREA- 80
P+++I FT + N +S ++ A + E+G E + V+ ++ EA
Sbjct: 336 PDMVI--FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI 393
Query: 81 -----EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
E+ D Y L+ A C + E + ++E GL P+ + + + GLC +
Sbjct: 394 VYFCIEKAND--VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
G + M Q+ L D YT+LI+ KG +AR+V EM++SG SP A +
Sbjct: 452 GNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511
Query: 196 NRLIR 200
+ LIR
Sbjct: 512 DLLIR 516
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 171/402 (42%), Gaps = 42/402 (10%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
LL+ + GV + ++S + E ++ TYN LV AY EA G++ MT++G
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
+ PN I++ V+ G+ M + P+ TY +++ L K +
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 178 KVLSEMIDSGFSPSVATYNRLIR---RLRLEDAVG-VFRGMTERDLSPDVVTYNTLISKF 233
K+L +M +G SP+ AT+N ++ ++ V VFR M PD T+NTLIS +
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 501
Query: 234 CKL-KEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
+ E D K M EM G TY L+ L + ++ +M G
Sbjct: 502 GRCGSEVDASK---MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT-------------------- 332
P +Y+ ++ Y G + +++ + P ++
Sbjct: 559 PTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERA 618
Query: 333 -------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
G+ P V +N+++ ++A G+L + E GLSPD V+Y +++ + R
Sbjct: 619 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Query: 386 IREPGKAYEL-----KVEVDENMISWLGIWGLFEDTRKSLMQ 422
E KA E+ K ++ +++S+ + F R+ LMQ
Sbjct: 679 RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF--CRRGLMQ 718
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 147/368 (39%), Gaps = 52/368 (14%)
Query: 49 SKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMG 108
SK+ G E++ T+KGV N++ TY ++ AY + DEA+
Sbjct: 367 SKEAAGVIEMM---TKKGVMPNAI----------------TYTTVIDAYGKAGKEDEALK 407
Query: 109 ILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFC 168
+ M E G PN ++NAV+ L K R M +P+ T+ +++ L
Sbjct: 408 LFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCG 467
Query: 169 DKGHPGKARKVLSEMIDSGFSPSVATYNRLIR---RLRLE-DAVGVFRGMTERDLSPDVV 224
+KG +V EM GF P T+N LI R E DA ++ MT + V
Sbjct: 468 NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVT 527
Query: 225 TYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLC----------LQQ 274
TYN L++ + + D + ++M KG P +Y +++ ++
Sbjct: 528 TYNALLNALAR--KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEN 585
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFV--- 331
R+ E ML + N L + R F K + D + L F
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNN 645
Query: 332 --------------TGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
G SP VTYN+++ G +A +L+ + + L PD VSY
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705
Query: 378 TVILGFCR 385
TVI GFCR
Sbjct: 706 TVIKGFCR 713
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 19/267 (7%)
Query: 77 IREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNA 127
+REA++ E T TYNAL+ + EA+ +L+ M E + +++N
Sbjct: 297 LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNE 356
Query: 128 VVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG 187
+V G M +K + P+ TYT++I + G +A K+ M ++G
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 188 FSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD--L 241
P+ TYN ++ ++ R + + + M SP+ T+NT+++ C K D +
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA-LCGNKGMDKFV 475
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
+ F EM G PD DT+ LI +A ++ EM R G + TY L
Sbjct: 476 NRVFR---EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNAL 532
Query: 302 MNAYRIEGQFSKAFHLQDEMTHKGFLP 328
+NA +G + ++ +M KGF P
Sbjct: 533 LNALARKGDWRSGENVISDMKSKGFKP 559
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 157/409 (38%), Gaps = 71/409 (17%)
Query: 36 IRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVL 95
+R +T + + S + K A +L + E G V TYN ++
Sbjct: 210 VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLV----------------TYNVILD 253
Query: 96 AYCCDERV-DEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLA 154
+ R + +G+L M +GLK + + + V+ +G + +
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL----IRRLRLEDAVGV 210
P TY +L+ +F G +A VL EM ++ TYN L +R ++A GV
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 211 FRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTL 270
MT++ + P+ +TY T+I + K + D +A ++ M G +P+ TY ++ L
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKED--EALKLFYSMKEAGCVPNTCTYNAVLSLL 431
Query: 271 CLQQRLSEAYDL-----------------------------------FREMLRWGVSPNN 295
+ R +E + FREM G P+
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDR 491
Query: 296 ETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAE 355
+T+ L++AY G A + EMT GF+ TYNA++ L G
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMTR--------AGFNACVTTYNALLNALARKGDWR 543
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
V+ M G P SY ++ + + G Y L +E EN I
Sbjct: 544 SGENVISDMKSKGFKPTETSYSLMLQCYAK----GGNY-LGIERIENRI 587
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 156 DERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI-------RRLRLEDAV 208
D R YT+++H + G KA + M + G SP++ TYN ++ R R +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWR--KIL 266
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIR 268
GV M + L D T +T++S C +E L +A E AE+ G P TY L++
Sbjct: 267 GVLDEMRSKGLKFDEFTCSTVLSA-CA-REGLLREAKEFFAELKSCGYEPGTVTYNALLQ 324
Query: 269 TLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
+EA + +EM ++ TY L+ AY G +A + + MT KG +
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVM- 383
Query: 329 GFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
P+ +TY +I G+ +EAL + M E G P+ +Y V+
Sbjct: 384 -------PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 121/310 (39%), Gaps = 51/310 (16%)
Query: 89 TYNALVLAYC-CDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
T+N L+ AY C VD A + MT G + ++NA++ L KG
Sbjct: 493 TFNTLISAYGRCGSEVD-ASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHP---------------------------------- 173
M K P E +Y+ ++ + G+
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 174 -GKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNT 228
+ + + G+ P + +N ++ R + A G+ + E LSPD+VTYN+
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 229 LISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
L+ + ++ + KA E+ + + PD +Y +I+ C + + EA + EM
Sbjct: 672 LMDMY--VRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE 729
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGL 348
G+ P TY ++ Y G F++ + + M P+ +T+ ++ G
Sbjct: 730 RGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK--------NDCRPNELTFKMVVDGY 781
Query: 349 CLLGRAEEAL 358
C G+ EA+
Sbjct: 782 CRAGKYSEAM 791
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
N L D + + + + A K+L ++ + V Y ++ R +
Sbjct: 167 NSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKY 226
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
E A+ +F M E SP +VTYN ++ F K+ K + EM KG+ D T
Sbjct: 227 EKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR-SWRKILGVLDEMRSKGLKFDEFTCS 285
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
++ + L EA + F E+ G P TY L+ + G +++A + EM
Sbjct: 286 TVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEEN 345
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P VTYN ++ G ++EA GV+ M + G+ P+A++Y TVI +
Sbjct: 346 S-CPA-------DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYG 397
Query: 385 RIREPGKAYELKVEVDE 401
+ + +A +L + E
Sbjct: 398 KAGKEDEALKLFYSMKE 414
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E Q+ + +YN ++ +C + EA+ +L MTERG++P + ++N V G G
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 752
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV--ATYN 196
M + D P+E T+ ++ +C G +A +S++ F P +
Sbjct: 753 AEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI--KTFDPCFDDQSIQ 810
Query: 197 RLIRRLR 203
RL R+R
Sbjct: 811 RLALRVR 817
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 46/166 (27%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
IRE + + + TYN+L+ Y +A IL+ + + LKP+L+S+N V++G C +G
Sbjct: 657 IRE-DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG 715
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
M +A ++LSEM + G P + TYN
Sbjct: 716 LMQ-----------------------------------EAVRMLSEMTERGIRPCIFTYN 740
Query: 197 RLIRRLRLEDAVGVF-------RGMTERDLSPDVVTYNTLISKFCK 235
+ A+G+F M + D P+ +T+ ++ +C+
Sbjct: 741 TFVSGY---TAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 134/299 (44%), Gaps = 21/299 (7%)
Query: 88 TTYNALVLAYCCD-ERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
+ Y L + C + + + +A +L M + G++P + ++ C +
Sbjct: 565 SVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFE 624
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLED 206
+ K + PD TYT +I+ +C P +A + +M P V TY+ L L +
Sbjct: 625 ILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVL---LNSDP 681
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
+ + R M D+ PDVV Y +I+++C L DL+K + + +M + I+PD TY L
Sbjct: 682 ELDMKREMEAFDVIPDVVYYTIMINRYCHLN--DLKKVYALFKDMKRREIVPDVVTYTVL 739
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
++ +L REM + V P+ YT L++ G +A + D+M
Sbjct: 740 LKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIE--- 789
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
+G P Y A+I C +G +EA + M E G+ PD V Y +I G CR
Sbjct: 790 -----SGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCR 843
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 133/322 (41%), Gaps = 34/322 (10%)
Query: 39 FTAVGNLQSESKKVGGAFELLKAGTEKGVE-SNSVSG------------RRIRE------ 79
FT +L +E + A +LL + GVE S+ G R+ RE
Sbjct: 568 FTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILV 627
Query: 80 AEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
+++V + TY ++ YC +A + M R +KP++++++ ++
Sbjct: 628 TKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------D 680
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI 199
M D+ PD YT +I+ +C K + +M P V TY L+
Sbjct: 681 PELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL 740
Query: 200 RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+ + + R M D+ PDV Y LI CK+ DL +A + +M+ G+ PD
Sbjct: 741 KN---KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIG--DLGEAKRIFDQMIESGVDPD 795
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
A Y LI C L EA +F M+ GV P+ YT L+ G KA L
Sbjct: 796 AAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVK 855
Query: 320 EMTHKGFLPGFVTGFSPSHVTY 341
EM KG P T S S V Y
Sbjct: 856 EMLEKGIKP---TKASLSAVHY 874
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 133/303 (43%), Gaps = 22/303 (7%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGL---KPNL-ISFNAVVQGLCGKGRMXXXXXXX 145
Y + C ++ D A +L+ + + + K +L I++ VV+GLC + R+
Sbjct: 255 YLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVV 314
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M + + PD Y+++I + KA V ++M+ + + +++
Sbjct: 315 LDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQM 374
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+A +F+ E ++S D V YN KL + +E+A E+ EM KGI PD
Sbjct: 375 GNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK--VEEAIELFREMTGKGIAPDVI 432
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
Y LI CLQ + S+A+DL EM G +P+ Y L G +AF M
Sbjct: 433 NYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMM 492
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
++ G P++VT+N +I GL G ++A + DA +++
Sbjct: 493 ENR--------GVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA----SMVK 540
Query: 382 GFC 384
GFC
Sbjct: 541 GFC 543
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 144/355 (40%), Gaps = 20/355 (5%)
Query: 56 FELLKAGTEKGVESNSVSGRRIREAEQ-VVDETTTYNALVLAYCCDERVDEAMGIL-RCM 113
FEL++ G E S + I E EQ +V ALV AY + DEA+ I R
Sbjct: 114 FELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAY 173
Query: 114 TERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHP 173
G P++ + N ++ + GR + + L D TY ++
Sbjct: 174 YSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDK 233
Query: 174 GKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDA--VGVFRGMTERDLSPDV------VT 225
+ K+LS ++ S Y I L L + F RD + V +
Sbjct: 234 EELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIA 293
Query: 226 YNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFRE 285
Y ++ C E +E A + +M GI PD Y +I + +A D+F +
Sbjct: 294 YRKVVRGLCY--EMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 286 MLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAII 345
ML+ N + ++ Y G FS+A+ L E T S V YN
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRE--------TNISLDRVCYNVAF 403
Query: 346 YGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD 400
L LG+ EEA+ + R M G++PD ++Y T+I G C + A++L +E+D
Sbjct: 404 DALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD 458
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 14/238 (5%)
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGM 214
Y ++ C + A V+ +M G P V Y+ +I + + + AV VF M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
++ + V ++++ +C++ + +A+++ E I D Y L
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMG--NFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLG 410
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
++ EA +LFREM G++P+ YT L+ ++G+ S AF L EM TG
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDG--------TGK 462
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKA 392
+P V YN + GL G A+EA L+ M G+ P V++ VI G E KA
Sbjct: 463 TPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 167/383 (43%), Gaps = 35/383 (9%)
Query: 36 IRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS-----------GRRIREAEQVV 84
+R + A + S S++ A+E+ +A + V ++V+ GR +E ++
Sbjct: 273 VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIF 332
Query: 85 DETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
++ + + LV ++C + +EA+ I M ++G++ N I +N ++
Sbjct: 333 EKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
+ M K L P TY L+ + + P +L EM D G P+V +Y
Sbjct: 393 NHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSY 452
Query: 196 NRLI----RRLRLED-AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAE 250
LI R ++ D A F M + L P +Y LI + EKA+ E
Sbjct: 453 TCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYS--VSGWHEKAYASFEE 510
Query: 251 MVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQ 310
M +GI P +TY ++ + ++++ MLR + TY L++ + +G
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
+ +A + E + G PS +TYN ++ G+ + +L+ M + L
Sbjct: 571 YIEARDVVSEFSK--------MGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLK 622
Query: 371 PDAVSYCTVILGFCRIREPGKAY 393
PD+++Y T+I F R+R+ +A+
Sbjct: 623 PDSITYSTMIYAFVRVRDFKRAF 645
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 135/324 (41%), Gaps = 15/324 (4%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
L+K+ ++G++ ++ + E + + T YN L+ AY ++E G+ M ++G
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKG 409
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFC-DKGHPGKA 176
LKP+ ++N ++ + + M L P+ ++YT LI + K A
Sbjct: 410 LKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMA 469
Query: 177 RKVLSEMIDSGFSPSVATYNRLIRRLRL----EDAVGVFRGMTERDLSPDVVTYNTLISK 232
M G PS +Y LI + E A F M + + P V TY +++
Sbjct: 470 ADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDA 529
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
F + D K E+ M+ + I TY L+ Q EA D+ E + G+
Sbjct: 530 F--RRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQ 587
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
P+ TY LMNAY GQ +K L EM P +TY+ +IY +
Sbjct: 588 PSVMTYNMLMNAYARGGQDAKLPQLLKEMA--------ALNLKPDSITYSTMIYAFVRVR 639
Query: 353 RAEEALGVLRGMPEIGLSPDAVSY 376
+ A + M + G PD SY
Sbjct: 640 DFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 14/276 (5%)
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGK-ARKVLSEM 183
+NA + GL R M++ ++ PD T LI G K ++ +M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 184 IDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP 239
+ G S + L++ E+A+ + M ++ + + + YNTL+ + K
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNH- 394
Query: 240 DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT 299
+E+ + EM KG+ P A TY L+ + + L REM G+ PN ++YT
Sbjct: 395 -IEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYT 453
Query: 300 GLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALG 359
L++AY G+ K +M FL G PS +Y A+I+ + G E+A
Sbjct: 454 CLISAY---GRTKK----MSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYA 506
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
M + G+ P +Y +V+ F R + GK E+
Sbjct: 507 SFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 110/295 (37%), Gaps = 57/295 (19%)
Query: 64 EKGVESNSV----------SGRRIREAEQVVDE---------TTTYNALVLAYCCDERVD 104
+KG+ SN++ I E E + E TYN L+ AY + D
Sbjct: 372 KKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPD 431
Query: 105 EAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX-XXMNQKDLAPDERTYTSL 163
+LR M + GL+PN+ S+ ++ +M M + L P +YT+L
Sbjct: 432 IVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTAL 491
Query: 164 IHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVG----VFRGMTERDL 219
IH + G KA EM G PSV TY ++ R G +++ M +
Sbjct: 492 IHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKI 551
Query: 220 SPDVVTYNTLISKFCK----LKEPDLEKAF-----------------------------E 246
+TYNTL+ F K ++ D+ F +
Sbjct: 552 KGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQ 611
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
+ EM + PD+ TY +I + A+ + M++ G P+ +Y L
Sbjct: 612 LLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 198 LIRRLRLEDAVGVF-RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
L+ R R+ D + + + +++ DV YN IS + D A+E+ M +
Sbjct: 247 LLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYD--DAWEVYEAMDKINV 304
Query: 257 LPDADTYEPLIRTLCLQQRLS-EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
PD T LI TL R + E +++F +M GV + + + GL+ ++ EG +A
Sbjct: 305 YPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEAL 364
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVS 375
+Q EM KG + + YN ++ EE G+ M + GL P A +
Sbjct: 365 VIQTEMEKKGI--------RSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAAT 416
Query: 376 YCTVILGFCRIREP 389
Y ++ + R +P
Sbjct: 417 YNILMDAYARRMQP 430
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 25/311 (8%)
Query: 34 VIIRGFTAVGNLQSESKKVGGAFELLKAGTEK-GVES-----NSVSGRRI-REAEQVVDE 86
+ ++ F A E KK G FEL+K K GVE+ +S+ ++ +EA+ + D+
Sbjct: 234 IAMKAFAAA----KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK 289
Query: 87 --------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
TY L+ +C + EA I M ++GLKP++++ N +++GL +
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKK 349
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M K P+ R+YT +I FC + A + +M+DSG P A Y L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I + +L+ + + M E+ PD TYN LI K P E A + +M+
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP--EHATRIYNKMIQN 467
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
I P T+ ++++ + + ++ EM++ G+ P++ +YT L+ EG+ +A
Sbjct: 468 EIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527
Query: 315 FHLQDEMTHKG 325
+EM KG
Sbjct: 528 CRYLEEMLDKG 538
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 15/299 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T+ + A+ + +A+GI M + K + + N ++ L G+ ++
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDK 289
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNR----LIRRLRL 204
++ P+ TYT L++ +C + +A ++ ++MID G P + +N L+R +
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKK 349
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
DA+ +F M + P+V +Y +I FCK + +E A E +MV G+ PDA Y
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK--QSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI Q++L Y+L +EM G P+ +TY L+ + A + ++M
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ- 466
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
PS T+N I+ + E V M + G+ PD SY +I G
Sbjct: 467 -------NEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGL 518
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 107/263 (40%), Gaps = 28/263 (10%)
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG------FSPSVATYNRLIRRLR 203
++ A D RTY S++ + VL EM G F+ ++ + R
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKER-- 245
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
+ AVG+F M + V T N L+ + K L K ++ + + + P+ TY
Sbjct: 246 -KKAVGIFELMKKYKFKIGVETINCLLDSLGRAK---LGKEAQVLFDKLKERFTPNMMTY 301
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPN----NETYTGLMNAYRIEGQFSKAFHLQD 319
L+ C + L EA ++ +M+ G+ P+ N GL+ + R + K FH+
Sbjct: 302 TVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRS-RKKSDAIKLFHV-- 358
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
M KG P + Y +I C E A+ M + GL PDA Y +
Sbjct: 359 -MKSKGPCPNVRS--------YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 380 ILGFCRIREPGKAYELKVEVDEN 402
I GF ++ YEL E+ E
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEK 432
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 16/168 (9%)
Query: 50 KKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGI 109
KK+ +ELLK EKG + TYNAL+ + + A I
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDG----------------KTYNALIKLMANQKMPEHATRI 460
Query: 110 LRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCD 169
M + ++P++ +FN +++ M +K + PD+ +YT LI
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIG 520
Query: 170 KGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTER 217
+G +A + L EM+D G + YN+ +F + +R
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 18/272 (6%)
Query: 74 GRRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
R++++AE++ +E TY L+ YC RV AM +L M ++ N +
Sbjct: 263 SRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMV 322
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
FN ++ GL GR+ + P TY SL+ FC G A K+L M+
Sbjct: 323 FNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 185 DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
G P+ TYN + + E+ + ++ + E SPD +TY+ ++ C+ +
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCE--DGK 440
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
L A ++ EM ++GI PD T LI LC + L EA++ F +R G+ P T+
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKM 500
Query: 301 LMNAYRIEGQFSKAFHLQDEMT---HKGFLPG 329
+ N R +G A L M+ H LP
Sbjct: 501 IDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPN 532
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 144/350 (41%), Gaps = 36/350 (10%)
Query: 34 VIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNAL 93
V+IR + G +Q + AFE ++ E S +R E ++D
Sbjct: 178 VLIRRYARAGMVQQAIR----AFEFARS-----YEPVCKSATELRLLEVLLD-------- 220
Query: 94 VLAYCCDERVDEAMGILRCM---TERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQ 150
A C + V EA L + + P++ FN ++ G ++ M
Sbjct: 221 --ALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKA 278
Query: 151 KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLED 206
++ P TY +LI +C A +VL EM + + +N +I L RL +
Sbjct: 279 MNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSE 338
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
A+G+ + P +VTYN+L+ FCK DL A ++ M+ +G+ P TY
Sbjct: 339 ALGMMERFFVCESGPTIVTYNSLVKNFCKAG--DLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
+ + E +L+ +++ G SP+ TY ++ +G+ S A + EM ++G
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
P +T +I+ LC L EEA G+ P +++
Sbjct: 457 --------DPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF 498
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 114/275 (41%), Gaps = 36/275 (13%)
Query: 154 APDERTYTSLIHLFCDKGHPGKARKVLSEM---IDSGFSPSVATYNRLI----RRLRLED 206
A + R L+ C +GH +A L + +DS + PSV +N L+ R +L+
Sbjct: 209 ATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQ 268
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
A ++ M ++ P VVTY TLI +C+++ ++ A E+ EM + + + P+
Sbjct: 269 AEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRR--VQIAMEVLEEMKMAEMEINFMVFNPI 326
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
I L RLSEA + P TY L+ + G A + M +G
Sbjct: 327 IDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGV 386
Query: 327 LPGFVT---------------------------GFSPSHVTYNAIIYGLCLLGRAEEALG 359
P T G SP +TY+ I+ LC G+ A+
Sbjct: 387 DPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQ 446
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
V + M G+ PD ++ +I CR+ +A+E
Sbjct: 447 VNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE 481
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 23/171 (13%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNA 92
N +++ F G+L GA ++LK +GV+ TTTYN
Sbjct: 359 NSLVKNFCKAGDLP-------GASKILKMMMTRGVDPT----------------TTTYNH 395
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
+ + +E M + + E G P+ ++++ +++ LC G++ M +
Sbjct: 396 FFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRG 455
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR 203
+ PD T T LIHL C +A + + G P T+ + LR
Sbjct: 456 IDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLR 506
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 32/324 (9%)
Query: 40 TAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCC 99
T VGNL +K+ G +LL G + N+V TYN L+ +Y
Sbjct: 369 TMVGNL-GRAKQFGAINKLLDEMVRDGCQPNTV----------------TYNRLIHSYGR 411
Query: 100 DERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERT 159
++EAM + M E G KP+ +++ ++ G + M L+PD T
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 160 YTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMT 215
Y+ +I+ GH A K+ EM+D G +P++ TYN ++ + ++A+ ++R M
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 216 ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQR 275
PD VTY+ ++ LE+A + EM K +PD Y L+
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGY--LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 276 LSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFS 335
+ +A+ ++ ML G+ PN T L++ + + ++A+ L M G
Sbjct: 590 VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM--------LALGLR 641
Query: 336 PSHVTYNAIIYGLCLLGRAEEALG 359
PS TY ++ C GR++ +G
Sbjct: 642 PSLQTY-TLLLSCCTDGRSKLDMG 664
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 101/231 (43%), Gaps = 14/231 (6%)
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLE 205
Q D TYT+++ G K+L EM+ G P+ TYNRLI R L
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+A+ VF M E PD VTY TLI K D+ A +M M G+ PD TY
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI--AMDMYQRMQAGGLSPDTFTYSV 474
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+I L L A+ LF EM+ G +PN TY +M+ + + A L +M +
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN-- 532
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
GF P VTY+ ++ L G EEA V M + PD Y
Sbjct: 533 ------AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 101/235 (42%), Gaps = 17/235 (7%)
Query: 187 GFSPSVATYNRLIRRLRLEDAVGVFRGMTE---RD-LSPDVVTYNTLISKFCKLKEPDLE 242
GF TY ++ L G + + RD P+ VTYN LI + + L
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY--LN 416
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+A + +M G PD TY LI L A D+++ M G+SP+ TY+ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
N KA HL HK F G +P+ VTYN ++ + AL + R
Sbjct: 477 NC------LGKAGHL--PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 363 GMPEIGLSPDAVSYCTV--ILGFCRIREPGKAYELKVEVDENMISWLGIWGLFED 415
M G PD V+Y V +LG C E +A +++ +N I ++GL D
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ-QKNWIPDEPVYGLLVD 582
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 32/324 (9%)
Query: 40 TAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCC 99
T VGNL +K+ G +LL G + N+V TYN L+ +Y
Sbjct: 369 TMVGNL-GRAKQFGAINKLLDEMVRDGCQPNTV----------------TYNRLIHSYGR 411
Query: 100 DERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERT 159
++EAM + M E G KP+ +++ ++ G + M L+PD T
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 160 YTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMT 215
Y+ +I+ GH A K+ EM+D G +P++ TYN ++ + ++A+ ++R M
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 216 ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQR 275
PD VTY+ ++ LE+A + EM K +PD Y L+
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGY--LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 276 LSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFS 335
+ +A+ ++ ML G+ PN T L++ + + ++A+ L M G
Sbjct: 590 VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM--------LALGLR 641
Query: 336 PSHVTYNAIIYGLCLLGRAEEALG 359
PS TY ++ C GR++ +G
Sbjct: 642 PSLQTY-TLLLSCCTDGRSKLDMG 664
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 103/235 (43%), Gaps = 14/235 (5%)
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLE 205
Q D TYT+++ G K+L EM+ G P+ TYNRLI R L
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+A+ VF M E PD VTY TLI K D+ A +M M G+ PD TY
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI--AMDMYQRMQAGGLSPDTFTYSV 474
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+I L L A+ LF EM+ G +PN TY +M+ + + A L +M +
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN-- 532
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
GF P VTY+ ++ L G EEA V M + PD Y ++
Sbjct: 533 ------AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 101/235 (42%), Gaps = 17/235 (7%)
Query: 187 GFSPSVATYNRLIRRLRLEDAVGVFRGMTE---RD-LSPDVVTYNTLISKFCKLKEPDLE 242
GF TY ++ L G + + RD P+ VTYN LI + + L
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY--LN 416
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+A + +M G PD TY LI L A D+++ M G+SP+ TY+ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
N KA HL HK F G +P+ VTYN ++ + AL + R
Sbjct: 477 NC------LGKAGHL--PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 363 GMPEIGLSPDAVSYCTV--ILGFCRIREPGKAYELKVEVDENMISWLGIWGLFED 415
M G PD V+Y V +LG C E +A +++ +N I ++GL D
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ-QKNWIPDEPVYGLLVD 582
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 32/324 (9%)
Query: 40 TAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCC 99
T VGNL +K+ G +LL G + N+V TYN L+ +Y
Sbjct: 369 TMVGNL-GRAKQFGAINKLLDEMVRDGCQPNTV----------------TYNRLIHSYGR 411
Query: 100 DERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERT 159
++EAM + M E G KP+ +++ ++ G + M L+PD T
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 160 YTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMT 215
Y+ +I+ GH A K+ EM+D G +P++ TYN ++ + ++A+ ++R M
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 216 ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQR 275
PD VTY+ ++ LE+A + EM K +PD Y L+
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGY--LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 276 LSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFS 335
+ +A+ ++ ML G+ PN T L++ + + ++A+ L M G
Sbjct: 590 VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM--------LALGLR 641
Query: 336 PSHVTYNAIIYGLCLLGRAEEALG 359
PS TY ++ C GR++ +G
Sbjct: 642 PSLQTY-TLLLSCCTDGRSKLDMG 664
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 103/235 (43%), Gaps = 14/235 (5%)
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLE 205
Q D TYT+++ G K+L EM+ G P+ TYNRLI R L
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+A+ VF M E PD VTY TLI K D+ A +M M G+ PD TY
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI--AMDMYQRMQAGGLSPDTFTYSV 474
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+I L L A+ LF EM+ G +PN TY +M+ + + A L +M +
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN-- 532
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
GF P VTY+ ++ L G EEA V M + PD Y ++
Sbjct: 533 ------AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 101/235 (42%), Gaps = 17/235 (7%)
Query: 187 GFSPSVATYNRLIRRLRLEDAVGVFRGMTE---RD-LSPDVVTYNTLISKFCKLKEPDLE 242
GF TY ++ L G + + RD P+ VTYN LI + + L
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY--LN 416
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+A + +M G PD TY LI L A D+++ M G+SP+ TY+ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
N KA HL HK F G +P+ VTYN ++ + AL + R
Sbjct: 477 NC------LGKAGHL--PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 363 GMPEIGLSPDAVSYCTV--ILGFCRIREPGKAYELKVEVDENMISWLGIWGLFED 415
M G PD V+Y V +LG C E +A +++ +N I ++GL D
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ-QKNWIPDEPVYGLLVD 582
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 135/314 (42%), Gaps = 50/314 (15%)
Query: 78 REAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGR 137
R V D YNA++ Y + +A ++ M +RG P+LISFN ++ G
Sbjct: 216 RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGG 275
Query: 138 MXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNR 197
+ P A ++L + +SG P TYN
Sbjct: 276 LT---------------------------------PNLAVELLDMVRNSGLRPDAITYNT 302
Query: 198 LI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKF--CKLKEPDLEKAFEMKAEM 251
L+ R L+ AV VF M PD+ TYN +IS + C L + E+ F E+
Sbjct: 303 LLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA-AEAERLF---MEL 358
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
KG PDA TY L+ ++ + +++++M + G + TY +++ Y +GQ
Sbjct: 359 ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL 418
Query: 312 SKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
A L +M KG ++G +P +TY +I L R EA ++ M ++G+ P
Sbjct: 419 DLALQLYKDM--KG-----LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP 471
Query: 372 DAVSYCTVILGFCR 385
+Y +I G+ +
Sbjct: 472 TLQTYSALICGYAK 485
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 172/380 (45%), Gaps = 46/380 (12%)
Query: 36 IRGFTAVGNLQSESKKVGGAFELLKAGTEKG-----VESNSVSGRRIRE-------AEQV 83
++ + A+ + S S K A EL+ A ++G + N++ R++ A ++
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 84 VD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAV--VQGL 132
+D + TYN L+ A D +D A+ + M +P+L ++NA+ V G
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
CG + K PD TY SL++ F + + K ++V +M GF
Sbjct: 345 CGLA--AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 193 ATYNRLI----RRLRLEDAVGVFR---GMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF 245
TYN +I ++ +L+ A+ +++ G++ R+ PD +TY LI K +A
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN--PDAITYTVLIDSLGKANRT--VEAA 458
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY 305
+ +EM+ GI P TY LI + EA D F MLR G P+N Y+ +++
Sbjct: 459 ALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVL 518
Query: 306 RIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMP 365
+ KA+ L +M G +PS+ Y +I GL R+++ +R M
Sbjct: 519 LRGNETRKAWGLYRDMISD--------GHTPSYTLYELMILGLMKENRSDDIQKTIRDME 570
Query: 366 EI-GLSPDAVSYCTVILGFC 384
E+ G++P +S ++ G C
Sbjct: 571 ELCGMNPLEIS-SVLVKGEC 589
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 139/315 (44%), Gaps = 14/315 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+ N L+ A C D R++E ++ + + G K + S ++ G + M
Sbjct: 824 SINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSM 883
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR-LED- 206
P R Y +I L C A ++SEM ++ F +A +N +++ +ED
Sbjct: 884 KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943
Query: 207 --AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
V V++ + E L PD TYNTLI +C+ + P E+ + + +M + G+ P DTY+
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRP--EEGYLLMQQMRNLGLDPKLDTYK 1001
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI Q+ L +A LF E+L G+ + Y +M R G SKA L M +
Sbjct: 1002 SLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKN- 1060
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G P+ T + ++ G +EA VL + + + + Y +VI +
Sbjct: 1061 -------AGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYL 1113
Query: 385 RIREPGKAYELKVEV 399
R ++ E +E+
Sbjct: 1114 RSKDYNSGIERLLEM 1128
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 111/274 (40%), Gaps = 40/274 (14%)
Query: 157 ERTYTSLIHLFCDKGHPGKARKVLSEMIDSGF----SPS----VATYNRLIRRLRLEDAV 208
E S++ ++C G P A +V+++ GF SP + Y + + E V
Sbjct: 716 ESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVV 775
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIR 268
G R + +PD+ T+N+L+S + + E+A + M+ G P ++ L+
Sbjct: 776 GNLR---QSGRTPDLKTWNSLMSAYAQCG--CYERARAIFNTMMRDGPSPTVESINILLH 830
Query: 269 TLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
LC+ RL E Y + E+ G + + +++A+ G + + M G+LP
Sbjct: 831 ALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLP 890
Query: 329 GF---------------------------VTGFSPSHVTYNAIIYGLCLLGRAEEALGVL 361
F +N+++ + ++ + V
Sbjct: 891 TIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVY 950
Query: 362 RGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+ + E GL PD +Y T+I+ +CR R P + Y L
Sbjct: 951 QRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLL 984
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TYN+L+ A+ + ++ + + M + G + +++N ++ +G++
Sbjct: 366 DAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 146 XXMNQKDLA---PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI--- 199
M K L+ PD TYT LI +A ++SEM+D G P++ TY+ LI
Sbjct: 426 KDM--KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGY 483
Query: 200 -RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
+ + E+A F M PD + Y+ ++ L+ + KA+ + +M+ G P
Sbjct: 484 AKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVL--LRGNETRKAWGLYRDMISDGHTP 541
Query: 259 DADTYEPLIRTLCLQQRLS---------------------------EAYDLFREMLRWGV 291
YE +I L + R E +DL L+ +
Sbjct: 542 SYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAI 601
Query: 292 SP----NNETYTGLMNAYRIEGQFSKAFHL 317
+ N+T ++ +Y G+ S+AF L
Sbjct: 602 TNGYELENDTLLSILGSYSSSGRHSEAFEL 631
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 99/261 (37%), Gaps = 50/261 (19%)
Query: 74 GRRIREAEQVVDET---------TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
G+R+R+AE +V E +N+++ Y E + + + + + E GL+P+ +
Sbjct: 905 GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETT 964
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLF----C------------ 168
+N ++ C R M L P TY SLI F C
Sbjct: 965 YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024
Query: 169 -------------------DKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRL----E 205
D G KA K+L M ++G P++AT + L+ +
Sbjct: 1025 SKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQ 1084
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+A V + + ++ + Y+++I + L+ D E EM +G+ PD +
Sbjct: 1085 EAEKVLSNLKDTEVELTTLPYSSVIDAY--LRSKDYNSGIERLLEMKKEGLEPDHRIWTC 1142
Query: 266 LIRTLCLQQRLSEAYDLFREM 286
+R + E L + +
Sbjct: 1143 FVRAASFSKEKIEVMLLLKAL 1163
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 150/352 (42%), Gaps = 48/352 (13%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
V+ + TYN L+ Y +DEA + R M E G++P++ ++N+++ G +
Sbjct: 44 VLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVL 103
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMID-SGFSPSVATYNRLIRR 201
M L+PD +Y +L+ + G G+A K+L E I +G P + TYN L+
Sbjct: 104 QLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDA 163
Query: 202 L----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK---------------------- 235
L ++A+ +F+ + R + P+++TYN LI+ CK
Sbjct: 164 LCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPN 222
Query: 236 -----------LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFR 284
K +EK ++ +M +G D ++ L R EAY+
Sbjct: 223 AVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMH 282
Query: 285 EMLRWGV-SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNA 343
E++R G S + +Y L+N Y +G L +E+ K G P T+
Sbjct: 283 ELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMK--------GLKPDDYTHTI 334
Query: 344 IIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
I+ GL +G A L + E+G+ P V+ +I G C+ +A L
Sbjct: 335 IVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL 386
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 16/226 (7%)
Query: 175 KARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLI 230
+A +L + I G P V TYN LI R + +++A V R M E + PDV TYN+LI
Sbjct: 31 RAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLI 90
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW- 289
S K L + ++ EM+H G+ PD +Y L+ R EA+ + E +
Sbjct: 91 SG--AAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLA 148
Query: 290 GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLC 349
G+ P +TY L++A G A L + + P +TYN +I GLC
Sbjct: 149 GLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR---------VKPELMTYNILINGLC 199
Query: 350 LLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
R ++R + + G +P+AV+Y T++ + + + K +L
Sbjct: 200 KSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQL 245
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 22/270 (8%)
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGV 210
PD TY +LI + +A V M ++G P V TYN LI + L L + +
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 211 FRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH-KGILPDADTYEPLIRT 269
F M LSPD+ +YNTL+S + KL +AF++ E +H G++P DTY L+
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMSCYFKLGRHG--EAFKILHEDIHLAGLVPGIDTYNILLDA 163
Query: 270 LCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG 329
LC A +LF+ L+ V P TY L+N + + E+
Sbjct: 164 LCKSGHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKK------ 216
Query: 330 FVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREP 389
+G++P+ VTY ++ R E+ L + M + G + D + C V+ +
Sbjct: 217 --SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRA 274
Query: 390 GKAYELKVEV------DENMISWLGIWGLF 413
+AYE E+ ++++S+ + L+
Sbjct: 275 EEAYECMHELVRSGTRSQDIVSYNTLLNLY 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 227 NTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM 286
N ++ CK + +LE+A + + + G+LPD TY LI+ + EAY + R M
Sbjct: 17 NISVNSLCKFR--NLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM 74
Query: 287 LRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIY 346
G+ P+ TY L++ ++ L DEM H +G SP +YN ++
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLH--------SGLSPDMWSYNTLMS 126
Query: 347 GLCLLGRAEEALGVLR-GMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
LGR EA +L + GL P +Y ++ C+ A EL
Sbjct: 127 CYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIEL 176
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 39/239 (16%)
Query: 25 LRNRLSPP----NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS------- 73
L++R+ P N++I G +S++VG +++ + G N+V+
Sbjct: 180 LKSRVKPELMTYNILINGL-------CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKM 232
Query: 74 ---GRRIREAEQVV----DETTTYN-----ALVLAYCCDERVDEAMGILRCMTERGLKP- 120
+RI + Q+ E T++ A+V A R +EA + + G +
Sbjct: 233 YFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQ 292
Query: 121 NLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVL 180
+++S+N ++ G + + K L PD+ T+T +++ + G+ G A K L
Sbjct: 293 DIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Query: 181 SEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK 235
+ + + G PSV T N LI L ++ A+ +F M R D TY +++ CK
Sbjct: 353 ACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCK 407
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 149/347 (42%), Gaps = 40/347 (11%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNA 92
N +I+G+ G Q A E L+ +G E++ + TY
Sbjct: 261 NTMIKGYCKAGQTQK-------AMEKLRDMETRGHEADKI----------------TYMT 297
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
++ A D + + + M E+G++ +F+ V+ GLC +G++ M +K
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRLEDAV 208
P+ YT LI + G A ++L MID GF P V TY N L + R+E+A+
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPD-LEKAFEMKAEMVHKGILPDADTYEPLI 267
F L+ + + Y++LI K D E+ FE EM KG D+ Y LI
Sbjct: 418 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE---EMSEKGCTRDSYCYNALI 474
Query: 268 RTLCLQQRLSEAYDLFREM-LRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
+++ EA LF+ M G TYT L++ E + +A L D M K
Sbjct: 475 DAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK-- 532
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
G +P+ + A+ GLCL G+ A +L + +G+ DA
Sbjct: 533 ------GITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDA 573
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 137/312 (43%), Gaps = 13/312 (4%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
+ E+ ++ + TYN ++ YC + +AM LR M RG + + I++ ++Q
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
M++K + ++ +I C +G + V MI G P+VA Y
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 197 RLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV 252
LI + +EDA+ + M + PDVVTY+ +++ C K +E+A +
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC--KNGRVEEALDYFHTCR 424
Query: 253 HKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFS 312
G+ ++ Y LI L R+ EA LF EM G + ++ Y L++A+ +
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 313 KAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
+A L M + G + TY ++ G+ R EEAL + M + G++P
Sbjct: 485 EAIALFKRMEEE-------EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 537
Query: 373 AVSYCTVILGFC 384
A + + G C
Sbjct: 538 AACFRALSTGLC 549
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 130/315 (41%), Gaps = 49/315 (15%)
Query: 91 NALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQ 150
NAL+ ++ V+E + + R M E G++P L ++N ++ GL
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSA--------------- 235
Query: 151 KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLED 206
+F D A +V M P + TYN +I+ + +
Sbjct: 236 ---------------MFVDS-----AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQK 275
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
A+ R M R D +TY T+I C + D + EM KGI + +
Sbjct: 276 AMEKLRDMETRGHEADKITYMTMIQA-C-YADSDFGSCVALYQEMDEKGIQVPPHAFSLV 333
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
I LC + +L+E Y +F M+R G PN YT L++ Y G A L M +GF
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
P VTY+ ++ GLC GR EEAL GL+ +++ Y ++I G +
Sbjct: 394 --------KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKA 445
Query: 387 REPGKAYELKVEVDE 401
+A L E+ E
Sbjct: 446 GRVDEAERLFEEMSE 460
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 111/276 (40%), Gaps = 41/276 (14%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
Y L+ Y V++A+ +L M + G KP++++++ VV GLC GR+
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLE 205
LA + Y+SLI G +A ++ EM + G + YN LI + +++
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 206 DAVGVFRGMTERD-LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY- 263
+A+ +F+ M E + V TY L+S KE E+A ++ M+ KGI P A +
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILLSGM--FKEHRNEEALKLWDMMIDKGITPTAACFR 542
Query: 264 ---------------------------------EPLIRTLCLQQRLSEAYDLFREMLRWG 290
E +I TLC R+ EA L + G
Sbjct: 543 ALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERG 602
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
T ++NA R G+ A L G+
Sbjct: 603 REVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGY 638
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 8/139 (5%)
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
LI++ + E ++R+M G+ P TY LMN + F + E+ G
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGL-VSAMFVDSAERVFEVMESG 251
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
+ P VTYN +I G C G+ ++A+ LR M G D ++Y T+I
Sbjct: 252 RI-------KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
Query: 386 IREPGKAYELKVEVDENMI 404
+ G L E+DE I
Sbjct: 305 DSDFGSCVALYQEMDEKGI 323
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 149/319 (46%), Gaps = 22/319 (6%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERG---LKPNLISFNAVVQGLCGKGRMXXXXX 143
T+TYN L+ Y + + + +L M E G + PN+ +FN +VQ C K ++
Sbjct: 150 TSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWE 209
Query: 144 XXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR-KVLSEMI-DSGFSPSVATYNRLI-- 199
M + + PD TY ++ + KG +A +V+ +M+ P+ T ++
Sbjct: 210 VVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGG 269
Query: 200 --RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD-LEKAFEMKAEMVHKGI 256
R R+ D + R M E + ++V +N+LI+ F ++ + D +++ + E +
Sbjct: 270 YCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKEC---NV 326
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
D TY ++ + +A +F+EM++ GV P+ Y+ L Y + KA
Sbjct: 327 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 386
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
L L + P+ V + +I G C G ++A+ V M + G+SP+ ++
Sbjct: 387 L---------LETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 437
Query: 377 CTVILGFCRIREPGKAYEL 395
T++ G+ +++P KA E+
Sbjct: 438 ETLMWGYLEVKQPWKAEEV 456
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 169/381 (44%), Gaps = 48/381 (12%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+Y L+ A ++ I+ + + G K + I FNAV+ G M M
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKM 141
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG---FSPSVATYNRLI----RR 201
+ L P TY +LI + G P ++ ++L M++ G P++ T+N L+ ++
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL---- 257
++E+A V + M E + PD VTYNT+ + C +++ + +A ++E+V K ++
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIAT--CYVQKGETVRA---ESEVVEKMVMKEKA 256
Query: 258 -PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE----GQFS 312
P+ T ++ C + R+ + R M V N + L+N + +E
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF-VEVMDRDGID 315
Query: 313 KAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
+ L E K + +TY+ ++ G E+A V + M + G+ PD
Sbjct: 316 EVLTLMKECNVKADV-----------ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPD 364
Query: 373 AVSYCTVILGFCRIREPGKAYE----LKVEVDENMISWLGI---W---GLFEDTRKSLMQ 422
A +Y + G+ R +EP KA E L VE N++ + + W G +D + +
Sbjct: 365 AHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 423 ----GLS-NEDTFSSLMNDYL 438
G+S N TF +LM YL
Sbjct: 425 MCKFGVSPNIKTFETLMWGYL 445
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 136/303 (44%), Gaps = 30/303 (9%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS-----------GRRIREA 80
PN IR F + + KKV A+E++K E GV ++V+ G +R
Sbjct: 186 PN--IRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 81 EQVVDETT----------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
+VV++ T +V YC + RV + + +R M E ++ NL+ FN+++
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
G M + ++ D TY+++++ + G+ KA +V EM+ +G P
Sbjct: 304 GFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 191 SVATYNRL----IRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFE 246
Y+ L +R + A + + P+VV + T+IS +C ++ A
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCS--NGSMDDAMR 420
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
+ +M G+ P+ T+E L+ ++ +A ++ + M GV P N T+ L A+R
Sbjct: 421 VFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWR 480
Query: 307 IEG 309
+ G
Sbjct: 481 VAG 483
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 120/271 (44%), Gaps = 50/271 (18%)
Query: 158 RTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--------------- 202
R+ T L+++ ++G P +A+ V + ++G PS+ +Y L+ +
Sbjct: 46 RSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSE 105
Query: 203 ------------------------RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE 238
+EDAV M E L+P TYNTLI + +
Sbjct: 106 VEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGK 165
Query: 239 PDLEKAFEMKAEMVHKG---ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
P E++ E+ M+ +G + P+ T+ L++ C ++++ EA+++ ++M GV P+
Sbjct: 166 P--ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 296 ETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAE 355
TY + Y +G+ +A + E+ K + P+ T ++ G C GR
Sbjct: 224 VTYNTIATCYVQKGETVRA---ESEVVEKMVMK---EKAKPNGRTCGIVVGGYCREGRVR 277
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
+ L +R M E+ + + V + ++I GF +
Sbjct: 278 DGLRFVRRMKEMRVEANLVVFNSLINGFVEV 308
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 132/304 (43%), Gaps = 14/304 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+Y++L+ D ILR + R ++ F ++Q G + +
Sbjct: 83 SYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKI 142
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----RLRL 204
D ++ +LI++ D G KA+ D P+ ++N LI+ +
Sbjct: 143 TSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDW 202
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
E A VF M E ++ P VVTYN+LI C + D+ KA + +M+ K I P+A T+
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLC--RNDDMGKAKSLLEDMIKKRIRPNAVTFG 260
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
L++ LC + +EA L +M G P Y LM+ G+ +A L EM +
Sbjct: 261 LLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKR 320
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P V YN ++ LC R EA VL M G P+A +Y +I GFC
Sbjct: 321 --------RIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFC 372
Query: 385 RIRE 388
RI +
Sbjct: 373 RIED 376
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 125/287 (43%), Gaps = 17/287 (5%)
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
L+PN +SFN +++G K M + ++ P TY SLI C GKA+
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 178 KVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
+L +MI P+ T+ L++ L +A + M R P +V Y L+S
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
K D K + EM + I PD Y L+ LC + R+ EAY + EM G P
Sbjct: 302 GKRGRIDEAKL--LLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 294 NNETYTGLMNAY-RIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
N TY +++ + RIE F ++ + M + P+ T+ ++ GL G
Sbjct: 360 NAATYRMMIDGFCRIE-DFDSGLNVLNAM--------LASRHCPTPATFVCMVAGLIKGG 410
Query: 353 RAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
+ A VL M + LS + ++ ++ C I++ G E EV
Sbjct: 411 NLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC-IKDGGVYCEALSEV 456
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 15/313 (4%)
Query: 103 VDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTS 162
VD+A+ + +T + S N ++ L G + L P+ ++
Sbjct: 132 VDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNI 191
Query: 163 LIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVG----VFRGMTERD 218
LI F DK A KV EM++ PSV TYN LI L D +G + M ++
Sbjct: 192 LIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKR 251
Query: 219 LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE 278
+ P+ VT+ L+ C E +A ++ +M ++G P Y L+ L + R+ E
Sbjct: 252 IRPNAVTFGLLMKGLCCKGE--YNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 309
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSH 338
A L EM + + P+ Y L+N E + +A+ + EM K G P+
Sbjct: 310 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK--------GCKPNA 361
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKA-YELKV 397
TY +I G C + + L VL M P ++ ++ G + A + L+V
Sbjct: 362 ATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEV 421
Query: 398 EVDENMISWLGIW 410
+N+ G W
Sbjct: 422 MGKKNLSFGSGAW 434
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 6/247 (2%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
+ ++N L+ + + A + M E ++P+++++N+++ LC M
Sbjct: 186 SVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLE 245
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRL 202
M +K + P+ T+ L+ C KG +A+K++ +M G P + Y L+ +R
Sbjct: 246 DMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRG 305
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
R+++A + M +R + PDVV YN L++ C E + +A+ + EM KG P+A T
Sbjct: 306 RIDEAKLLLGEMKKRRIKPDVVIYNILVNHLC--TECRVPEAYRVLTEMQMKGCKPNAAT 363
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y +I C + ++ ML P T+ ++ G A + + M
Sbjct: 364 YRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMG 423
Query: 323 HKGFLPG 329
K G
Sbjct: 424 KKNLSFG 430
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
+V TYN+L+ C ++ + +A +L M ++ ++PN ++F +++GLC KG
Sbjct: 216 EVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEA 275
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M + P Y L+ +G +A+ +L EM P V YN L+
Sbjct: 276 KKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNH 335
Query: 202 L----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
L R+ +A V M + P+ TY +I FC++++ D
Sbjct: 336 LCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFD 378
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 6/197 (3%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
+++ T+ L+ CC +EA ++ M RG KP L+++ ++ L +GR+
Sbjct: 250 KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 309
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M ++ + PD Y L++ C + +A +VL+EM G P+ ATY +I
Sbjct: 310 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMID 369
Query: 201 RL-RLED---AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
R+ED + V M P T+ +++ +K +L+ A + M K +
Sbjct: 370 GFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGL--IKGGNLDHACFVLEVMGKKNL 427
Query: 257 LPDADTYEPLIRTLCLQ 273
+ ++ L+ LC++
Sbjct: 428 SFGSGAWQNLLSDLCIK 444
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 15/299 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T+ + A+ + +A+GI M + K + + N ++ L G+ ++
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDK 288
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNR----LIRRLRL 204
++ P+ TYT L++ +C + +A ++ ++MID G P + +N L+R ++
Sbjct: 289 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 348
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
DA+ +F M + P+V +Y +I FCK + +E A E +MV G+ PDA Y
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK--QSSMETAIEYFDDMVDSGLQPDAAVYT 406
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI Q++L Y+L +EM G P+ +TY L+ + + ++M
Sbjct: 407 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ- 465
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
PS T+N I+ + E V M + G+ PD SY +I G
Sbjct: 466 -------NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 517
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 143/311 (45%), Gaps = 25/311 (8%)
Query: 34 VIIRGFTAVGNLQSESKKVGGAFELLKAGTEK-GVES-----NSVSGRRI-REAEQVVDE 86
+ ++ F A E KK G FEL+K K GVE+ +S+ ++ +EA+ + D+
Sbjct: 233 IAMKAFAAA----KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK 288
Query: 87 --------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
TY L+ +C + EA I M + GLKP++++ N +++GL +
Sbjct: 289 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 348
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M K P+ R+YT +I FC + A + +M+DSG P A Y L
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I + +L+ + + M E+ PD TYN LI K P E + +M+
Sbjct: 409 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP--EHGTRIYNKMIQN 466
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
I P T+ ++++ + + ++ EM++ G+ P++ +YT L+ EG+ +A
Sbjct: 467 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Query: 315 FHLQDEMTHKG 325
+EM KG
Sbjct: 527 CRYLEEMLDKG 537
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 16/168 (9%)
Query: 50 KKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGI 109
KK+ +ELLK EKG + TYNAL+ + + I
Sbjct: 416 KKLDTVYELLKEMQEKGHPPDG----------------KTYNALIKLMANQKMPEHGTRI 459
Query: 110 LRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCD 169
M + ++P++ +FN +++ M +K + PD+ +YT LI
Sbjct: 460 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 519
Query: 170 KGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTER 217
+G +A + L EM+D G + YN+ +F + +R
Sbjct: 520 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 567
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 15/299 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T+ + A+ + +A+GI M + K + + N ++ L G+ ++
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDK 289
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNR----LIRRLRL 204
++ P+ TYT L++ +C + +A ++ ++MID G P + +N L+R ++
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
DA+ +F M + P+V +Y +I FCK + +E A E +MV G+ PDA Y
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK--QSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI Q++L Y+L +EM G P+ +TY L+ + + ++M
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ- 466
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
PS T+N I+ + E V M + G+ PD SY +I G
Sbjct: 467 -------NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 518
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 143/311 (45%), Gaps = 25/311 (8%)
Query: 34 VIIRGFTAVGNLQSESKKVGGAFELLKAGTEK-GVES-----NSVSGRRI-REAEQVVDE 86
+ ++ F A E KK G FEL+K K GVE+ +S+ ++ +EA+ + D+
Sbjct: 234 IAMKAFAAA----KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK 289
Query: 87 --------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
TY L+ +C + EA I M + GLKP++++ N +++GL +
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M K P+ R+YT +I FC + A + +M+DSG P A Y L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
I + +L+ + + M E+ PD TYN LI K P E + +M+
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP--EHGTRIYNKMIQN 467
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
I P T+ ++++ + + ++ EM++ G+ P++ +YT L+ EG+ +A
Sbjct: 468 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Query: 315 FHLQDEMTHKG 325
+EM KG
Sbjct: 528 CRYLEEMLDKG 538
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 16/168 (9%)
Query: 50 KKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGI 109
KK+ +ELLK EKG + TYNAL+ + + I
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDG----------------KTYNALIKLMANQKMPEHGTRI 460
Query: 110 LRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCD 169
M + ++P++ +FN +++ M +K + PD+ +YT LI
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 520
Query: 170 KGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTER 217
+G +A + L EM+D G + YN+ +F + +R
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 149/349 (42%), Gaps = 22/349 (6%)
Query: 67 VESNSVSGRRIREAEQVVDET------TTYNALVLAYCCDERVDEAMGILRCMTERGLKP 120
+E + G R ++VV T + LV A + V +A+ + R KP
Sbjct: 136 LEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKP 195
Query: 121 NLISFNAVVQGLCGKGRMXXXXXXXXXM-NQKDLAPDERTYTSLIHLFCDKGHPGKARKV 179
++N+V+ L +G+ M N+ D PD TY++LI + G A ++
Sbjct: 196 TSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRL 255
Query: 180 LSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK 235
EM D+ P+ Y L+ + ++E A+ +F M SP V TY LI K
Sbjct: 256 FDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGK 315
Query: 236 LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
D +A+ +M+ G+ PD L+ L R+ E ++F EM W +P
Sbjct: 316 AGRVD--EAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 296 ETYTGLMNA-YRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRA 354
+Y ++ A + + S+ D+M SPS TY+ +I G C R
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMK--------ADSVSPSEFTYSILIDGYCKTNRV 425
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENM 403
E+AL +L M E G P +YC++I + + A EL E+ EN
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENF 474
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 21/279 (7%)
Query: 107 MGILRCMTERGLKPNLISFNAVVQGLC-GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIH 165
MG+ RC P ++S+N V++ L K + M ++P E TY+ LI
Sbjct: 364 MGMWRCT------PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 166 LFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSP 221
+C KA +L EM + GF P A Y LI L R E A +F+ + E +
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV 477
Query: 222 DVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYD 281
Y +I F K + L +A ++ EM ++G PD Y L+ + ++EA
Sbjct: 478 SSRVYAVMIKHFGKCGK--LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 282 LFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTY 341
L R+M G + ++ ++N + G +A + + + H +G P VTY
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKH--------SGIKPDGVTY 587
Query: 342 NAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
N ++ G EEA ++R M + G DA++Y +++
Sbjct: 588 NTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 162/379 (42%), Gaps = 35/379 (9%)
Query: 57 ELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTER 116
EL+KA + S ++S + + ++TYN+++L + + ++ + M
Sbjct: 167 ELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNE 226
Query: 117 G-LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGK 175
G P+ I+++A++ GR M + P E+ YT+L+ ++ G K
Sbjct: 227 GDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEK 286
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A + EM +G SP+V TY LI+ L R+++A G ++ M L+PDVV N L++
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ-RLSEAYDLFREMLRWG 290
K+ +E+ + +EM P +Y +I+ L + +SE F +M
Sbjct: 347 ILGKVGR--VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADS 404
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP------GFVTGFSP-------- 336
VSP+ TY+ L++ Y + KA L +EM KGF P +
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 337 -------------SHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
S Y +I G+ EA+ + M G PD +Y ++ G
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 384 CRIREPGKAYELKVEVDEN 402
+ +A L +++EN
Sbjct: 525 VKAGMINEANSLLRKMEEN 543
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 6/230 (2%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
+A+ V TY+ L+ YC RV++A+ +L M E+G P ++ +++ L R
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
+ + R Y +I F G +A + +EM + G P V YN L
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 199 ----IRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
++ + +A + R M E D+ ++N +++ F + P +A EM + H
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVP--RRAIEMFETIKHS 578
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNA 304
GI PD TY L+ EA + REM G + TY+ +++A
Sbjct: 579 GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ YNAL+ ++EA +LR M E G + ++ S N ++ G G
Sbjct: 513 DVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMF 572
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE 205
+ + PD TY +L+ F G +A +++ EM D GF TY+ ++
Sbjct: 573 ETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL------ 626
Query: 206 DAVG 209
DAVG
Sbjct: 627 DAVG 630
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 131/305 (42%), Gaps = 16/305 (5%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TYN L+ D+A+ + M ++ +KP ++F ++ GLC R+
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 146 XXMNQ-KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL-- 202
M + + P Y SLI C G A K+ E + A Y+ LI L
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 203 --RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
R + + M+E+ PD VTYN LI+ FC E D E A + EMV KG+ PD
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFC--VENDSESANRVLDEMVEKGLKPDV 328
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
+Y ++ ++ EA LF +M R G SP+ +Y + + QF +A + DE
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Query: 321 MTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
M K G+ P + LC G+ E V+ + G++ DA + +I
Sbjct: 389 MLFK--------GYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR-GIAGDADVWSVMI 439
Query: 381 LGFCR 385
C+
Sbjct: 440 PTMCK 444
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGV 210
PD TY LIH G A K+ EM+ P+ T+ LI L R+++A+ +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 211 FRGMTE-RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRT 269
M + + P V Y +LI C++ E L AF++K E I DA Y LI +
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGE--LSFAFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 270 LCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG 329
L R +E + EM G P+ TY L+N + +E A + DEM K
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEK----- 322
Query: 330 FVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G P ++YN I+ + + EEA + MP G SPD +SY V G C
Sbjct: 323 ---GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC 374
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 184 IDSGFSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP 239
ID P TYN LI +DA+ +F M ++ + P VT+ TLI CK +
Sbjct: 144 IDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK--DS 201
Query: 240 DLEKAFEMKAEMVH-KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETY 298
+++A +MK +M+ G+ P Y LI+ LC LS A+ L E + + Y
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIY 261
Query: 299 TGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEAL 358
+ L+++ G+ ++ + +EM+ KG P VTYN +I G C+ +E A
Sbjct: 262 STLISSLIKAGRSNEVSMILEEMSEKGC--------KPDTVTYNVLINGFCVENDSESAN 313
Query: 359 GVLRGMPEIGLSPDAVSYCTVILGFCRIRE 388
VL M E GL PD +SY ++ F RI++
Sbjct: 314 RVLDEMVEKGLKPDVISYNMILGVFFRIKK 343
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 13/205 (6%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ Y+ L+ + R +E IL M+E+G KP+ +++N ++ G C +
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRR 201
M +K L PD +Y ++ +F +A + +M G SP +Y + L
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV---HKGILP 258
L+ E+A + M + P + K C+ E+ ++++ H+GI
Sbjct: 377 LQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCE------SGKLEILSKVISSLHRGIAG 430
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLF 283
DAD + +I T+C + +S++ DL
Sbjct: 431 DADVWSVMIPTMCKEPVISDSIDLL 455
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 136/309 (44%), Gaps = 16/309 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+Y AL+ +Y + + A I R M G +P+ I++ +++ + +
Sbjct: 176 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 149 ---NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR-RLRL 204
+ L PD++ Y +I+++ G+ KARKV S M+ G S TYN L+
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY 295
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
++ ++ M D+ PDVV+Y LI + + + E+A + EM+ G+ P Y
Sbjct: 296 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARRE--EEALSVFEEMLDAGVRPTHKAYN 353
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD-EMTH 323
L+ + + +A +F+ M R + P+ +YT +++AY + D E
Sbjct: 354 ILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAY---------VNASDMEGAE 404
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
K F V GF P+ VTY +I G E+ + V M G+ + T++
Sbjct: 405 KFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS 464
Query: 384 CRIREPGKA 392
R + G A
Sbjct: 465 GRCKNFGSA 473
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 128/310 (41%), Gaps = 20/310 (6%)
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ AY + A +L +++ G PN+IS+ A+++ G+ M
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMID---SGFSPSVATYNRLIRRLR----LE 205
P TY ++ F + +A +V ++D S P Y+ +I + E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A VF M + + VTYN+L+S KE + K ++ +M I PD +Y
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE--VSKIYD---QMQRSDIQPDVVSYAL 319
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
LI+ +R EA +F EML GV P ++ Y L++A+ I G +A + M
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
P +Y ++ E A + + G P+ V+Y T+I G+ +
Sbjct: 380 IFPDL--------WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 431
Query: 386 IREPGKAYEL 395
+ K E+
Sbjct: 432 ANDVEKMMEV 441
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 6/201 (2%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ +Y L+ AY R +EA+ + M + G++P ++N ++ G +
Sbjct: 313 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 372
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR-- 203
M + + PD +YT+++ + + A K + GF P++ TY LI+
Sbjct: 373 KSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 432
Query: 204 --LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+E + V+ M + + T++ + K + A EM G+ PD
Sbjct: 433 NDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK--NFGSALGWYKEMESCGVPPDQK 490
Query: 262 TYEPLIRTLCLQQRLSEAYDL 282
L+ Q L EA +L
Sbjct: 491 AKNVLLSLASTQDELEEAKEL 511
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 136/309 (44%), Gaps = 16/309 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+Y AL+ +Y + + A I R M G +P+ I++ +++ + +
Sbjct: 183 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 242
Query: 149 ---NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR-RLRL 204
+ L PD++ Y +I+++ G+ KARKV S M+ G S TYN L+
Sbjct: 243 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY 302
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
++ ++ M D+ PDVV+Y LI + + + E+A + EM+ G+ P Y
Sbjct: 303 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARRE--EEALSVFEEMLDAGVRPTHKAYN 360
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD-EMTH 323
L+ + + +A +F+ M R + P+ +YT +++AY + D E
Sbjct: 361 ILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAY---------VNASDMEGAE 411
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
K F V GF P+ VTY +I G E+ + V M G+ + T++
Sbjct: 412 KFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS 471
Query: 384 CRIREPGKA 392
R + G A
Sbjct: 472 GRCKNFGSA 480
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 128/310 (41%), Gaps = 20/310 (6%)
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ AY + A +L +++ G PN+IS+ A+++ G+ M
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMID---SGFSPSVATYNRLIRRLR----LE 205
P TY ++ F + +A +V ++D S P Y+ +I + E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A VF M + + VTYN+L+S KE + K ++ +M I PD +Y
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE--VSKIYD---QMQRSDIQPDVVSYAL 326
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
LI+ +R EA +F EML GV P ++ Y L++A+ I G +A + M
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
P +Y ++ E A + + G P+ V+Y T+I G+ +
Sbjct: 387 IFPDL--------WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 438
Query: 386 IREPGKAYEL 395
+ K E+
Sbjct: 439 ANDVEKMMEV 448
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 100/262 (38%), Gaps = 39/262 (14%)
Query: 157 ERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFR 212
E + LI + G+ A +VLS + G +P+V +Y L+ R + +A +FR
Sbjct: 146 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 205
Query: 213 GMTERDLSPDVVTYNTLISKFC---KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRT 269
M P +TY ++ F K KE E+ FE + + PD Y +I
Sbjct: 206 RMQSSGPEPSAITYQIILKTFVEGDKFKEA--EEVFETLLDEKKSPLKPDQKMYHMMIYM 263
Query: 270 LCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG 329
+A +F M+ GV + TY LM+ E + + + D+M P
Sbjct: 264 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQRSDIQPD 320
Query: 330 FVT---------------------------GFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
V+ G P+H YN ++ + G E+A V +
Sbjct: 321 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 380
Query: 363 GMPEIGLSPDAVSYCTVILGFC 384
M + PD SY T++ +
Sbjct: 381 SMRRDRIFPDLWSYTTMLSAYV 402
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 6/201 (2%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ +Y L+ AY R +EA+ + M + G++P ++N ++ G +
Sbjct: 320 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 379
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR-- 203
M + + PD +YT+++ + + A K + GF P++ TY LI+
Sbjct: 380 KSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 439
Query: 204 --LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+E + V+ M + + T++ + K + A EM G+ PD
Sbjct: 440 NDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK--NFGSALGWYKEMESCGVPPDQK 497
Query: 262 TYEPLIRTLCLQQRLSEAYDL 282
L+ Q L EA +L
Sbjct: 498 AKNVLLSLASTQDELEEAKEL 518
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 148/328 (45%), Gaps = 16/328 (4%)
Query: 57 ELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTER 116
+ +K +E+G+ ++ + + + T N+++L ++D + + M E
Sbjct: 150 QYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVES 209
Query: 117 GLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKA 176
I +++ LC G + ++ L P + Y LI FC+ G+
Sbjct: 210 EFDSERI--RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACM 267
Query: 177 RKVLSEMIDSGFSPSVATYNRLIRRLRLE----DAVGVFRGMTERDLSPDVVTYNTLISK 232
+VL MI PS+ Y ++I+ L + +A +F+ + ++ +PD V Y T+I
Sbjct: 268 SEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRG 327
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
FC+ + L A ++ EM+ KG+ P+ Y +I + +S + EMLR G
Sbjct: 328 FCE--KGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYG 385
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
+ ++ + G+ +AF + M+ TG +P+ +TYNA+I G C
Sbjct: 386 GTMLSCNTMIKGFCSHGKSDEAFEIFKNMSE--------TGVTPNAITYNALIKGFCKEN 437
Query: 353 RAEEALGVLRGMPEIGLSPDAVSYCTVI 380
+ E+ L + + + +GL P ++Y ++
Sbjct: 438 KVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 22/271 (8%)
Query: 52 VGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILR 111
V +ELLK G ++G++ Y L+ +C +L
Sbjct: 229 VSEGYELLKQGLKQGLDPGQY----------------VYAKLISGFCEIGNYACMSEVLH 272
Query: 112 CMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKG 171
M P++ + +++GLC + + K APD YT++I FC+KG
Sbjct: 273 TMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKG 332
Query: 172 HPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYN 227
G ARK+ EMI G P+ YN +I +R + + M +++ N
Sbjct: 333 WLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCN 392
Query: 228 TLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREML 287
T+I FC + D +AFE+ M G+ P+A TY LI+ C + ++ + L++E+
Sbjct: 393 TMIKGFCSHGKSD--EAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELK 450
Query: 288 RWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
G+ P+ Y L+ ++ + + +L+
Sbjct: 451 ALGLKPSGMAYAALVRNLKMSDSVATSLNLE 481
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 150/339 (44%), Gaps = 24/339 (7%)
Query: 72 VSGRRIREAEQVVDETTTYN---ALVLAY--CCDER--VDEAMGILRCMTERGLKPNLIS 124
+ G+ ++ A+ +D TT + L+ Y C E V+EA+ + + + G+ ++++
Sbjct: 124 LDGKAVKAAKSFLD-TTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVT 182
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
N+V+ G ++ M + + D LI CD G + ++L + +
Sbjct: 183 CNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGL 240
Query: 185 DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
G P Y +LI V M + P + Y +I C + +
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC-MNKKQ 299
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
LE A+ + + KG PD Y +IR C + L A L+ EM++ G+ PN Y
Sbjct: 300 LE-AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNV 358
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
+++ + G+ S +EM G+ + ++ N +I G C G+++EA +
Sbjct: 359 MIHGHFKRGEISLVEAFYNEMLR--------NGYGGTMLSCNTMIKGFCSHGKSDEAFEI 410
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
+ M E G++P+A++Y +I GFC+ + K +L E+
Sbjct: 411 FKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 149/360 (41%), Gaps = 45/360 (12%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ T+ +++ Y ++ + M GLKPN++S+NA++ G
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR-- 203
+ Q + PD +YT L++ + PGKA++V M P+V TYN LI
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306
Query: 204 --LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE----------------------- 238
L +AV +FR M + + P+VV+ TL++ + K+
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 366
Query: 239 ----------PDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
+LEKA + M K + D+ T+ LI C + EA +EM
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGL 348
+ E Y+ ++ AY +GQ ++A + ++M + G P + Y ++++
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK--------MAGCEPDVIAYTSMLHAY 478
Query: 349 CLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLG 408
+ +A + M G+ PD+++ ++ F + +P + L + E I + G
Sbjct: 479 NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTG 538
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 145/344 (42%), Gaps = 42/344 (12%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YN ++ + VD+A G+ M + KP+ +++A++ G+ M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR----LE 205
+ +AP TY +LI+ G+ +A +V +M D+G P + T+N ++ +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK--GILPDADTY 263
A+ F M + PD T+N +I +C K +A ++ M K PD T+
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIII--YCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
++ ++ + +F M+ G+ PN +Y LM AY + G A + ++
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 324 KGFLPGFVT--------GFS-------------------PSHVTYNAIIYGLCLLGRAEE 356
G +P V+ G S P+ VTYNA+I G E
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 357 ALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD 400
A+ + R M + G+ P+ VS CT++ R ++ KV VD
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK-------KVNVD 348
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 144/347 (41%), Gaps = 35/347 (10%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
+TYN L+ A EA+ + + MT+ G+ P+L++ N V+ +
Sbjct: 82 STYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFEL 141
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMID--SGFSPSVATYNRLIR----R 201
M + PD T+ +I+ G +A + + M + + P V T+ ++ +
Sbjct: 142 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 201
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+E+ VF M L P++V+YN L+ + A + ++ GI+PD
Sbjct: 202 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG--TALSVLGDIKQNGIIPDVV 259
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+Y L+ + ++ +A ++F M + PN TY L++AY G ++A + +M
Sbjct: 260 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Query: 322 THKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCLLGRA 354
G P V+ G + + YN+ I
Sbjct: 320 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 379
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
E+A+ + + M + + D+V++ +I G CR+ + +A E+++
Sbjct: 380 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 39/342 (11%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQV-------- 83
P+V+ FT++ +L S ++ + +A +G++ N VS + A V
Sbjct: 186 PDVVT--FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 243
Query: 84 -----------VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+ + +Y L+ +Y + +A + M + KPN++++NA++
Sbjct: 244 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 303
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
G + M Q + P+ + +L+ VLS G + +
Sbjct: 304 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNT 363
Query: 193 ATYNR----LIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL-KEPDLEKAFEM 247
A YN I LE A+ +++ M ++ + D VT+ LIS C++ K P+ A
Sbjct: 364 AAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE---AISY 420
Query: 248 KAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRI 307
EM I + Y ++ Q +++EA +F +M G P+ YT +++AY
Sbjct: 421 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 480
Query: 308 EGQFSKAFHLQDEMTHKGFLP----------GFVTGFSPSHV 339
++ KA L EM G P F G PS+V
Sbjct: 481 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 522
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
+ K D Y +IR + +A LF EM +W P+ ETY L+NA+ GQ+
Sbjct: 3 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 62
Query: 312 SKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
A +L D+M +PS TYN +I G EAL V + M + G+ P
Sbjct: 63 RWAMNLMDDMLR--------AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGP 114
Query: 372 DAVSYCTVILGFCRIREPGKA---YEL----KVEVDE---NMI----SWLG----IWGLF 413
D V++ V+ + R+ KA +EL KV D N+I S LG LF
Sbjct: 115 DLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 174
Query: 414 EDTRKSLMQGLSNEDTFSSLMNDYLAQDE 442
R+ + + TF+S+M+ Y + E
Sbjct: 175 NSMREKRAECRPDVVTFTSIMHLYSVKGE 203
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 12/259 (4%)
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLE 205
QK+ Y +I L +AR + EM P TY+ LI R +
Sbjct: 4 QKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWR 63
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A+ + M ++P TYN LI+ C + +A E+ +M G+ PD T+
Sbjct: 64 WAMNLMDDMLRAAIAPSRSTYNNLINA-CG-SSGNWREALEVCKKMTDNGVGPDLVTHNI 121
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
++ ++ S+A F M V P+ T+ ++ GQ S+A L + M K
Sbjct: 122 VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 181
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
P VT+ +I++ + G E V M GL P+ VSY ++ +
Sbjct: 182 ------AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 235
Query: 386 IREPGKAYELKVEVDENMI 404
G A + ++ +N I
Sbjct: 236 HGMSGTALSVLGDIKQNGI 254
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 9/252 (3%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
+Q VD YN+L+ A C + A ++R M +GLKP+ ++ +V G C G+M
Sbjct: 179 QQTVD---VYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKE 235
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M+++ P R LI + G+ A++++S+M GF P + T+N LI
Sbjct: 236 AQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIE 295
Query: 201 RL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
+ +E + ++ + L D+ TY TLI K+ + +++AF + V G
Sbjct: 296 AISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGK--IDEAFRLLNNCVEDGH 353
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
P Y P+I+ +C +A+ F +M PN YT L+ G+F A +
Sbjct: 354 KPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAAN 413
Query: 317 LQDEMTHKGFLP 328
EMT G +P
Sbjct: 414 YLVEMTEMGLVP 425
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 135/322 (41%), Gaps = 19/322 (5%)
Query: 93 LVLAYCCDERVDEAMGILRCMTER-GLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
++ Y + VD+A+ + + + G + + +N+++ LC M +K
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDA 207
L PD+RTY L++ +C G +A++ L EM GF+P + LI L LE A
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ MT+ PD+ T+N LI K E +E EM G+ D DTY+ LI
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGE--VEFCIEMYYTACKLGLCVDIDTYKTLI 329
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
+ ++ EA+ L + G P Y ++ G F AF +M
Sbjct: 330 PAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMK----- 384
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIR 387
V P+ Y +I G+ +A L M E+GL P + + V G
Sbjct: 385 ---VKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGL---- 437
Query: 388 EPGKAYELKVEVDENMISWLGI 409
+ G ++L + +++ + G+
Sbjct: 438 KNGGKHDLAMRIEQLEVQLRGV 459
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 98/244 (40%), Gaps = 42/244 (17%)
Query: 178 KVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTER-DLSPDVVTYNTLISK 232
K+L +M D S T +I + ++ AV +F G+ + V YN+L+
Sbjct: 132 KILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHA 191
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
C +K A+ + M+ KG+ PD TY L+ C ++ EA + EM R G +
Sbjct: 192 LCDVKM--FHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFN 249
Query: 293 P----NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT------GFSPS----- 337
P + GL+NA G A + +MT GF+P T S S
Sbjct: 250 PPARGRDLLIEGLLNA----GYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEF 305
Query: 338 --HVTYNAIIYGLCL--------------LGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+ Y A GLC+ +G+ +EA +L E G P Y +I
Sbjct: 306 CIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIK 365
Query: 382 GFCR 385
G CR
Sbjct: 366 GMCR 369
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 149/360 (41%), Gaps = 45/360 (12%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ T+ +++ Y ++ + M GLKPN++S+NA++ G
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR-- 203
+ Q + PD +YT L++ + PGKA++V M P+V TYN LI
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 438
Query: 204 --LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE----------------------- 238
L +AV +FR M + + P+VV+ TL++ + K+
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 498
Query: 239 ----------PDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
+LEKA + M K + D+ T+ LI C + EA +EM
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGL 348
+ E Y+ ++ AY +GQ ++A + ++M + G P + Y ++++
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK--------MAGCEPDVIAYTSMLHAY 610
Query: 349 CLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLG 408
+ +A + M G+ PD+++ ++ F + +P + L + E I + G
Sbjct: 611 NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTG 670
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 145/344 (42%), Gaps = 42/344 (12%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YN ++ + VD+A G+ M + KP+ +++A++ G+ M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR----LE 205
+ +AP TY +LI+ G+ +A +V +M D+G P + T+N ++ +
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI--LPDADTY 263
A+ F M + PD T+N +I +C K +A ++ M K PD T+
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIII--YCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
++ ++ + +F M+ G+ PN +Y LM AY + G A + ++
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 324 KGFLPGFVT--------GFS-------------------PSHVTYNAIIYGLCLLGRAEE 356
G +P V+ G S P+ VTYNA+I G E
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 357 ALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD 400
A+ + R M + G+ P+ VS CT++ R ++ KV VD
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK-------KVNVD 480
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 144/347 (41%), Gaps = 35/347 (10%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
+TYN L+ A EA+ + + MT+ G+ P+L++ N V+ +
Sbjct: 214 STYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFEL 273
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMID--SGFSPSVATYNRLIR----R 201
M + PD T+ +I+ G +A + + M + + P V T+ ++ +
Sbjct: 274 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 333
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+E+ VF M L P++V+YN L+ + A + ++ GI+PD
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG--TALSVLGDIKQNGIIPDVV 391
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+Y L+ + ++ +A ++F M + PN TY L++AY G ++A + +M
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 322 THKGFLPGFVT---------------------------GFSPSHVTYNAIIYGLCLLGRA 354
G P V+ G + + YN+ I
Sbjct: 452 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 511
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
E+A+ + + M + + D+V++ +I G CR+ + +A E+++
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 39/342 (11%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQV-------- 83
P+V+ FT++ +L S ++ + +A +G++ N VS + A V
Sbjct: 318 PDVVT--FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 375
Query: 84 -----------VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+ + +Y L+ +Y + +A + M + KPN++++NA++
Sbjct: 376 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 435
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
G + M Q + P+ + +L+ VLS G + +
Sbjct: 436 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNT 495
Query: 193 ATYNR----LIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL-KEPDLEKAFEM 247
A YN I LE A+ +++ M ++ + D VT+ LIS C++ K P+ A
Sbjct: 496 AAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE---AISY 552
Query: 248 KAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRI 307
EM I + Y ++ Q +++EA +F +M G P+ YT +++AY
Sbjct: 553 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 612
Query: 308 EGQFSKAFHLQDEMTHKGFLP----------GFVTGFSPSHV 339
++ KA L EM G P F G PS+V
Sbjct: 613 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 654
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
+ K D Y +IR + +A LF EM +W P+ ETY L+NA+ GQ+
Sbjct: 135 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 194
Query: 312 SKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
A +L D+M +PS TYN +I G EAL V + M + G+ P
Sbjct: 195 RWAMNLMDDMLR--------AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGP 246
Query: 372 DAVSYCTVILGFCRIREPGKA---YEL----KVEVDE---NMI----SWLG----IWGLF 413
D V++ V+ + R+ KA +EL KV D N+I S LG LF
Sbjct: 247 DLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 306
Query: 414 EDTRKSLMQGLSNEDTFSSLMNDYLAQDE 442
R+ + + TF+S+M+ Y + E
Sbjct: 307 NSMREKRAECRPDVVTFTSIMHLYSVKGE 335
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 122/308 (39%), Gaps = 16/308 (5%)
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN-QKDLAPDERTY 160
R +E G+L R + N F +++ L +G + M QK+ Y
Sbjct: 90 RWEEVDGVLNSWVGRFARKN---FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIY 146
Query: 161 TSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTE 216
+I L +AR + EM P TY+ LI R + A+ + M
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206
Query: 217 RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRL 276
++P TYN LI+ C + +A E+ +M G+ PD T+ ++ ++
Sbjct: 207 AAIAPSRSTYNNLINA-CG-SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 277 SEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSP 336
S+A F M V P+ T+ ++ GQ S+A L + M K P
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR------AECRP 318
Query: 337 SHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELK 396
VT+ +I++ + G E V M GL P+ VSY ++ + G A +
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 397 VEVDENMI 404
++ +N I
Sbjct: 379 GDIKQNGI 386
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 123/277 (44%), Gaps = 14/277 (5%)
Query: 109 ILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDL-APDERTYTSLIHLF 167
I RC+ K +L F V + G+G M ++ P+E YT +I L
Sbjct: 92 IARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLL 151
Query: 168 CDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDV 223
+G K +V EM G S SV +Y LI R R E ++ + M +SP +
Sbjct: 152 GREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSI 211
Query: 224 VTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLF 283
+TYNT+I+ C D E + AEM H+GI PD TY L+ ++ EA +F
Sbjct: 212 LTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVF 270
Query: 284 REMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNA 343
R M G+ P+ TY+ L+ + + K L EM G LP +YN
Sbjct: 271 RTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI--------TSYNV 322
Query: 344 IIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
++ G +EA+GV M G +P+A +Y ++
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 15/285 (5%)
Query: 103 VDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTS 162
+D+ + + M +G+ ++ S+ A++ GR M + ++P TY +
Sbjct: 157 LDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNT 216
Query: 163 LIHLFCDKGHPGKA-RKVLSEMIDSGFSPSVATYNRLIRRLRL----EDAVGVFRGMTER 217
+I+ G + + +EM G P + TYN L+ + ++A VFR M +
Sbjct: 217 VINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG 276
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
+ PD+ TY+ L+ F KL+ LEK ++ EM G LPD +Y L+ +
Sbjct: 277 GIVPDLTTYSHLVETFGKLRR--LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIK 334
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
EA +F +M G +PN TY+ L+N + G++ L FL + P
Sbjct: 335 EAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL--------FLEMKSSNTDPD 386
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
TYN +I G +E + + M E + PD +Y +I
Sbjct: 387 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 133/312 (42%), Gaps = 19/312 (6%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEA--MGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E++ TYN ++ A C +D +G+ M G++P+++++N ++ +G
Sbjct: 205 EKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLG 263
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
MN + PD TY+ L+ F K +L EM G P + +YN L
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL-KEPDLEKAFEMKAEMVH 253
+ + +++A+GVF M +P+ TY+ L++ F + + D+ + F EM
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF---LEMKS 380
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK 313
PDA TY LI E LF +M+ + P+ ETY G++ A G
Sbjct: 381 SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHED 440
Query: 314 AFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
A + MT + PS Y +I EEAL M E+G +P
Sbjct: 441 ARKILQYMTANDIV--------PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 374 VSYCTVILGFCR 385
++ +++ F R
Sbjct: 493 ETFHSLLYSFAR 504
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 128/310 (41%), Gaps = 16/310 (5%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+V + TTY+ LV + R+++ +L M G P++ S+N +++ G +
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M P+ TY+ L++LF G R++ EM S P ATYN LI
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVF 397
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
++ V +F M E ++ PD+ TY +I F K E A ++ M I+P
Sbjct: 398 GEGGYFKEVVTLFHDMVEENIEPDMETYEGII--FACGKGGLHEDARKILQYMTANDIVP 455
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
+ Y +I EA F M G +P+ ET+ L+ ++ G ++ +
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
+ +G + T+NA I G+ EEA+ M + PD +
Sbjct: 516 SRLVD--------SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEA 567
Query: 379 V--ILGFCRI 386
V + F R+
Sbjct: 568 VLSVYSFARL 577
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 125/299 (41%), Gaps = 19/299 (6%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
E + + TY ++ A ++A IL+ MT + P+ ++ V++
Sbjct: 416 ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEE 475
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M++ P T+ SL++ F G ++ +LS ++DSG + T+N I
Sbjct: 476 ALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIE 535
Query: 201 RLR----LEDAVGVFRGMTERDLSPDVVTYNTLIS--KFCKLKEPDLEKAFEMKAEMVHK 254
+ E+AV + M + PD T ++S F +L + E+ EMKA
Sbjct: 536 AYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKA----S 591
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNA-YRIEGQFSK 313
ILP Y ++ +R + +L EML VS ++ ++ Y + +
Sbjct: 592 DILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQI 651
Query: 314 AFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
++ D++ +G G F YNA++ L LG+ E A VL + GL P+
Sbjct: 652 VEYVLDKLNSEGC--GLGIRF------YNALLDALWWLGQKERAARVLNEATKRGLFPE 702
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 28/166 (16%)
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
P+ Y +I L + L + ++F EM GVS + +YT L+NAY G++ + L
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 318 QDEMTHKGFLPGFVT----------------------------GFSPSHVTYNAIIYGLC 349
D M ++ P +T G P VTYN ++
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 350 LLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+ G +EA V R M + G+ PD +Y ++ F ++R K +L
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 113/241 (46%), Gaps = 6/241 (2%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+YNA++ + ++ + + M E G P+++++N ++ G+M M
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEM 280
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
+ +PD TY L+H+ P A L+ M + G PSV Y LI R L
Sbjct: 281 ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL 340
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
E M + PDVV Y +I+ + + +L+KA EM EM KG LP+ TY
Sbjct: 341 EACKYFLDEMVKAGCRPDVVCYTVMITGY--VVSGELDKAKEMFREMTVKGQLPNVFTYN 398
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
+IR LC+ EA L +EM G +PN Y+ L++ R G+ S+A + EM K
Sbjct: 399 SMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Query: 325 G 325
G
Sbjct: 459 G 459
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 126/294 (42%), Gaps = 19/294 (6%)
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK-DLAPDERTYTSLIHLFCDKG 171
M + G +FN ++ CG+ + ++ + P + +Y ++++
Sbjct: 175 MVQDGFPTTARTFNLLICS-CGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVK 233
Query: 172 HPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYN 227
V +M++ GFSP V TYN L+ R +++ +F M SPD TYN
Sbjct: 234 QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYN 293
Query: 228 TLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREML 287
L+ K +P A M GI P Y LI L L EM+
Sbjct: 294 ILLHILGKGNKP--LAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMV 351
Query: 288 RWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYG 347
+ G P+ YT ++ Y + G+ KA + EMT KG LP T YN++I G
Sbjct: 352 KAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT--------YNSMIRG 403
Query: 348 LCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
LC+ G EA +L+ M G +P+ V Y T++ +R+ GK E + + E
Sbjct: 404 LCMAGEFREACWLLKEMESRGCNPNFVVYSTLV---SYLRKAGKLSEARKVIRE 454
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 125/298 (41%), Gaps = 22/298 (7%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGL--KPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T+N L+ + C E +++ M + +P S+NA++ L G +
Sbjct: 186 TFNLLICS--CGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYK 243
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M + +PD TY L+ G + ++ EM GFSP TYN L+ L
Sbjct: 244 QMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGN 303
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
+ A+ M E + P V+ Y TLI + +LE EMV G PD
Sbjct: 304 KPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR--AGNLEACKYFLDEMVKAGCRPDVVC 361
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y +I + L +A ++FREM G PN TY ++ + G+F +A L EM
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 421
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIG----LSPDAVSY 376
+G P F V Y+ ++ L G+ EA V+R M + G L P + Y
Sbjct: 422 SRGCNPNF--------VVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ Y ++ Y +D+A + R MT +G PN+ ++N++++GLC G
Sbjct: 358 DVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLL 417
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG----FSPSVATYNR 197
M + P+ Y++L+ G +ARKV+ EM+ G P + Y R
Sbjct: 418 KEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR 473
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 140/326 (42%), Gaps = 21/326 (6%)
Query: 80 AEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
A + + TY L+ R+ + +L+ M G+ PN + +N ++ LC G++
Sbjct: 175 ASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVG 234
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI 199
M + P++ T+ LI +C++ ++ +L + GF P V T +++
Sbjct: 235 RARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVM 290
Query: 200 RRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
L R+ +A+ V + + DVV NTL+ +C L + + + F + EM KG
Sbjct: 291 EVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFI--EMERKG 348
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
LP+ +TY LI C L A D F +M + N T+ L+ I G+
Sbjct: 349 YLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGL 408
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVS 375
+ + M + G P YN +IYG R E+AL L M + L P AV
Sbjct: 409 KILEMMQDSDTVHG--ARIDP----YNCVIYGFYKENRWEDALEFLLKMEK--LFPRAVD 460
Query: 376 YCTVILGFCRIREPGKAYELKVEVDE 401
++ C E G +LK D+
Sbjct: 461 RSFKLISLC---EKGGMDDLKTAYDQ 483
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 164/405 (40%), Gaps = 68/405 (16%)
Query: 47 SESKKVGGAFELLKAGTEKGVESNSV----------SGRRIREAEQVVDET-----TTYN 91
S + ++G F+LL+ GV N+V ++ A ++ E T+N
Sbjct: 193 SLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFN 252
Query: 92 ALVLAYC----------------------------------CDE-RVDEAMGILRCMTER 116
L+ AYC C+E RV EA+ +L + +
Sbjct: 253 ILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESK 312
Query: 117 GLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKA 176
G K ++++ N +V+G C G+M M +K P+ TY LI +CD G A
Sbjct: 313 GGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSA 372
Query: 177 RKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDL--SPDVVTYNTLI 230
++M + AT+N LIR L R +D + + M + D + YN +I
Sbjct: 373 LDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVI 432
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
F KE E A E +M + + P A + +LC + + + + +M+ G
Sbjct: 433 YGF--YKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEG 488
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCL 350
P+ L++ Y G+ ++ L ++M +G+L P T+NA+I G C
Sbjct: 489 GVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYL--------PRSSTFNAVIIGFCK 540
Query: 351 LGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
+ + + M E G PD SY ++ C + KA+ L
Sbjct: 541 QDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLL 585
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 143/330 (43%), Gaps = 23/330 (6%)
Query: 84 VDETTTYNALVLAYCCDERVDEAMGILRCMTER-GLKPNLISFNAVVQGLCGKGRMXXXX 142
+ +TY AL C R D +L M + GL P+ F +++G G+ R+
Sbjct: 73 IHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGF-GRARLIKRV 131
Query: 143 XXXXXMNQK-DLAPDERTYTSLIHLFCDKGHPGKARKVLS-EMIDSGFSPSVATYNRLIR 200
+ K + P + + S++ + K AR+ + +M+ SG V TY L++
Sbjct: 132 ISVVDLVSKFGIKPSLKVFNSILDVLV-KEDIDIAREFFTRKMMASGIHGDVYTYGILMK 190
Query: 201 RLRLEDAVG----VFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
L L + +G + + M ++P+ V YNTL+ CK + +A + +EM
Sbjct: 191 GLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCK--NGKVGRARSLMSEMKE--- 245
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
P+ T+ LI C +Q+L ++ L + G P+ T T +M EG+ S+A
Sbjct: 246 -PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALE 304
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
+ + + KG G V V N ++ G C LG+ A M G P+ +Y
Sbjct: 305 VLERVESKG---GKV-----DVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 377 CTVILGFCRIREPGKAYELKVEVDENMISW 406
+I G+C + A + ++ + I W
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRW 386
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 41/253 (16%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN L+ YC +D A+ M ++ N +FN +++GL GR M
Sbjct: 355 TYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM 414
Query: 149 NQKDLAPDERT--YTSLIHLF---------------------------------CDKGHP 173
D R Y +I+ F C+KG
Sbjct: 415 QDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGM 474
Query: 174 GKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTL 229
+ +MI G PS+ + LI R ++E+++ + M R P T+N +
Sbjct: 475 DDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAV 534
Query: 230 ISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW 289
I FCK + + + +M +G +PD ++Y PL+ LC++ + +A+ LF M+
Sbjct: 535 IIGFCK--QDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEK 592
Query: 290 GVSPNNETYTGLM 302
+ P+ ++ LM
Sbjct: 593 SIVPDPSMWSSLM 605
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 12/194 (6%)
Query: 28 RLSPPNVIIRGFTAVGNLQSE-----------SKKVGGAFELLKAGTEKGVESNSVSGRR 76
R+ P N +I GF + + V +F+L+ EKG + +
Sbjct: 424 RIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISL-CEKGGMDDLKTAYD 482
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
E V + L+ Y +++E++ ++ M RG P +FNAV+ G C +
Sbjct: 483 QMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQD 542
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
++ M ++ PD +Y L+ C KG KA + S M++ P + ++
Sbjct: 543 KVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWS 602
Query: 197 RLIRRLRLEDAVGV 210
L+ L + A+ V
Sbjct: 603 SLMFCLSQKTAIHV 616
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 129/297 (43%), Gaps = 27/297 (9%)
Query: 85 DETTTYNALVLAYCCDERVDEAMGIL--RCMTERGLK-PNLISFNAVVQGLCGKGRMXXX 141
DET+ YN LV A C + V EA + + + G N N +++G G
Sbjct: 150 DETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKC 208
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M+ + + D +Y+ + + C G P KA K+ EM V YN +IR
Sbjct: 209 KEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRA 268
Query: 202 L----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
+ +E + VFR M ER P+V T+NT+I C ++ + A+ M EM +G
Sbjct: 269 IGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLC--EDGRMRDAYRMLDEMPKRGCQ 326
Query: 258 PDADTYEPLIRTLCLQQRL---SEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
PD+ TY +CL RL SE LF M+R GV P +TY LM + G
Sbjct: 327 PDSITY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPV 380
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
++ M +G +P YNA+I L G + A M E GLSP
Sbjct: 381 LYVWKTMKE--------SGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 119/294 (40%), Gaps = 38/294 (12%)
Query: 120 PNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKV 179
PN ++F V + + ++ +L DE ++ +L+ C+ H +A ++
Sbjct: 115 PNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEEL 173
Query: 180 L--SEMIDSGFSPSVATYNRLIRRLRLEDAVG-------VFRGMTERDLSPDVVTYNTLI 230
+I +GFS S + LI LR +G ++ M ++ D+ +Y+ +
Sbjct: 174 CFGKNVIGNGFSVSNTKIHNLI--LRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYM 231
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
CK +P KA ++ EM + + D Y +IR + Q + +FREM G
Sbjct: 232 DIMCKSGKP--WKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERG 289
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT------------------ 332
PN T+ ++ +G+ A+ + DEM +G P +T
Sbjct: 290 CEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLF 349
Query: 333 ------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
G P TY ++ G + L V + M E G +PD+ +Y VI
Sbjct: 350 GRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVI 403
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 3/216 (1%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
+ E V + +Y+ + C + +A+ + + M R +K +++++N V++ + +
Sbjct: 216 DTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGV 275
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M ++ P+ T+ ++I L C+ G A ++L EM G P TY L
Sbjct: 276 EFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL 335
Query: 199 IRRL-RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
RL + + + +F M + P + TY L+ KF + L+ + M G
Sbjct: 336 FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERW--GFLQPVLYVWKTMKESGDT 393
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
PD+ Y +I L + L A + EM+ G+SP
Sbjct: 394 PDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 151/341 (44%), Gaps = 41/341 (12%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERG---LKPNLISFNAVVQGLCGKGRMXXXXX 143
T+TYN L+ Y + + + +L M E G + PN+ +FN +VQ C K ++
Sbjct: 150 TSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWE 209
Query: 144 XXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR-KVLSEMI-DSGFSPSVATYNRLI-- 199
M + + PD TY ++ + KG +A +V+ +M+ P+ T ++
Sbjct: 210 VVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGG 269
Query: 200 --RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD---------LEKAFEMK 248
R R+ D + R M E + ++V +N+LI+ F ++ + D L +F +
Sbjct: 270 YCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEE 329
Query: 249 AEMVHK--------------GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
E+V + D TY ++ + +A +F+EM++ GV P+
Sbjct: 330 VELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPD 389
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRA 354
Y+ L Y + KA L L + P+ V + +I G C G
Sbjct: 390 AHAYSILAKGYVRAKEPKKAEEL---------LETLIVESRPNVVIFTTVISGWCSNGSM 440
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
++A+ V M + G+SP+ ++ T++ G+ +++P KA E+
Sbjct: 441 DDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 481
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 170/398 (42%), Gaps = 57/398 (14%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+Y L+ A ++ I+ + + G K + I FNAV+ G M M
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKM 141
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG---FSPSVATYNRLI----RR 201
+ L P TY +LI + G P ++ ++L M++ G P++ T+N L+ ++
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL---- 257
++E+A V + M E + PD VTYNT+ + C +++ + +A ++E+V K ++
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIAT--CYVQKGETVRA---ESEVVEKMVMKEKA 256
Query: 258 -PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
P+ T ++ C + R+ + R M V N + L+N + +E
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF-VEVMDRDGI- 314
Query: 317 LQDEMTHKGFLPGF---------------------VTGFSPSHVTYNAIIYGLCLLGRAE 355
DE+T L F +TY+ ++ G E
Sbjct: 315 --DEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYME 372
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE----LKVEVDENMISWLGI-- 409
+A V + M + G+ PDA +Y + G+ R +EP KA E L VE N++ + +
Sbjct: 373 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVIS 432
Query: 410 -W---GLFEDTRKSLMQ----GLS-NEDTFSSLMNDYL 438
W G +D + + G+S N TF +LM YL
Sbjct: 433 GWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYL 470
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 120/271 (44%), Gaps = 50/271 (18%)
Query: 158 RTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--------------- 202
R+ T L+++ ++G P +A+ V + ++G PS+ +Y L+ +
Sbjct: 46 RSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSE 105
Query: 203 ------------------------RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE 238
+EDAV M E L+P TYNTLI + +
Sbjct: 106 VEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGK 165
Query: 239 PDLEKAFEMKAEMVHKG---ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
P E++ E+ M+ +G + P+ T+ L++ C ++++ EA+++ ++M GV P+
Sbjct: 166 P--ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 296 ETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAE 355
TY + Y +G+ +A + E+ K + P+ T ++ G C GR
Sbjct: 224 VTYNTIATCYVQKGETVRA---ESEVVEKMVMK---EKAKPNGRTCGIVVGGYCREGRVR 277
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
+ L +R M E+ + + V + ++I GF +
Sbjct: 278 DGLRFVRRMKEMRVEANLVVFNSLINGFVEV 308
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 143/326 (43%), Gaps = 48/326 (14%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS-----------GRRIREA 80
PN IR F + + KKV A+E++K E GV ++V+ G +R
Sbjct: 186 PN--IRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 81 EQVVDETT----------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
+VV++ T +V YC + RV + + +R M E ++ NL+ FN+++
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDK----GHPGKARKVLSEMIDS 186
G M++ + DE T T L+ F ++ G+ +VL+ M +
Sbjct: 304 GFV------------EVMDRDGI--DEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKEC 349
Query: 187 GFSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
V TY+ ++ +E A VF+ M + + PD Y+ L + + KEP +
Sbjct: 350 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP--K 407
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
KA E+ ++ + P+ + +I C + +A +F +M ++GVSPN +T+ LM
Sbjct: 408 KAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 466
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLP 328
Y Q KA + M G P
Sbjct: 467 WGYLEVKQPWKAEEVLQMMRGCGVKP 492
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 10/209 (4%)
Query: 196 NRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
N LI R R +A VF+ + E P +++Y TL++ K+ + +E+ G
Sbjct: 53 NVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ--YGSISSIVSEVEQSG 110
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
D+ + +I + +A +M G++P TY L+ Y I G+ ++
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVS 375
L D M +G + P+ T+N ++ C + EEA V++ M E G+ PD V+
Sbjct: 171 ELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 376 YCTVILGFCRIREPGKAYELKVEVDENMI 404
Y T+ C +++ G+ + EV E M+
Sbjct: 226 YNTI--ATCYVQK-GETVRAESEVVEKMV 251
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
L+ L + R EA +F+ + G P+ +YT L+ A ++ Q+ + E+
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ-- 108
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
+G + +NA+I G E+A+ L M E+GL+P +Y T+I G+
Sbjct: 109 ------SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 386 IREPGKAYEL 395
+P ++ EL
Sbjct: 163 AGKPERSSEL 172
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 146/328 (44%), Gaps = 43/328 (13%)
Query: 78 REAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGR 137
+E Q++ E + LV + + V +A+ +L M + G +P+ F ++ LC G
Sbjct: 175 KENPQLI-EPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGS 233
Query: 138 MXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNR 197
+ M + + R +TSL++ +C G +A+ VL +M ++GF P
Sbjct: 234 VKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEP------- 285
Query: 198 LIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
D+V Y L+S + + + A+++ +M +G
Sbjct: 286 ------------------------DIVDYTNLLSGYANAGK--MADAYDLLRDMRRRGFE 319
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
P+A+ Y LI+ LC R+ EA +F EM R+ + TYT L++ + G+ K + +
Sbjct: 320 PNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIV 379
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
D+M KG +P S +TY I+ EE L ++ M +I PD Y
Sbjct: 380 LDDMIKKGLMP--------SELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYN 431
Query: 378 TVILGFCRIREPGKAYELKVEVDENMIS 405
VI C++ E +A L E++EN +S
Sbjct: 432 VVIRLACKLGEVKEAVRLWNEMEENGLS 459
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 136/307 (44%), Gaps = 15/307 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ Y L+ Y ++ +A +LR M RG +PN + ++Q LC RM
Sbjct: 286 DIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVF 345
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RR 201
M + + D TYT+L+ FC G K VL +MI G PS TY ++ ++
Sbjct: 346 VEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKK 405
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
E+ + + M + + PD+ YN +I CKL E +++A + EM G+ P D
Sbjct: 406 ESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGE--VKEAVRLWNEMEENGLSPGVD 463
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNE--TYTGLMNAYRIEGQFSKAFHLQD 319
T+ +I L Q L EA D F+EM+ G+ ++ T L+N + + A +
Sbjct: 464 TFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWS 523
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
+T KG + +++ I+ L G +EA M E+ P ++ +
Sbjct: 524 CITSKG-------ACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKL 576
Query: 380 ILGFCRI 386
+ G ++
Sbjct: 577 MKGLKKL 583
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 136/310 (43%), Gaps = 18/310 (5%)
Query: 36 IRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDET-------- 87
+R F AV L E +K +L++ + S +++A +V+DE
Sbjct: 160 MRQFGAVWGLIEEMRKENP--QLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPD 217
Query: 88 -TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
+ L+ A C V +A + M R NL F +++ G C G+M
Sbjct: 218 EYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLV 276
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
MN+ PD YT+L+ + + G A +L +M GF P+ Y LI+ L
Sbjct: 277 QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
R+E+A+ VF M + DVVTY L+S FCK + D K + + +M+ KG++P T
Sbjct: 337 RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKID--KCYIVLDDMIKKGLMPSELT 394
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y ++ ++ E +L +M + P+ Y ++ G+ +A L +EM
Sbjct: 395 YMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEME 454
Query: 323 HKGFLPGFVT 332
G PG T
Sbjct: 455 ENGLSPGVDT 464
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 27/246 (10%)
Query: 173 PGKARKVLSEMIDSG---------------FSPSVATYNRLIRRLRLEDAVGVFRGMTE- 216
PG +VL+ D+G + S+ Y +++ L G G+ E
Sbjct: 113 PGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEE 172
Query: 217 -RDLSPDVVTYNTLISKFCKLKEPDL-EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
R +P ++ + + D+ +KA E+ EM G PD + L+ LC
Sbjct: 173 MRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHG 232
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
+ +A LF +M R N +T L+ + G+ +A ++ +M GF
Sbjct: 233 SVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNE--------AGF 283
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
P V Y ++ G G+ +A +LR M G P+A Y +I C++ +A +
Sbjct: 284 EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMK 343
Query: 395 LKVEVD 400
+ VE++
Sbjct: 344 VFVEME 349
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 127/294 (43%), Gaps = 16/294 (5%)
Query: 105 EAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLI 164
EA M E G+KP + + ++ LC K + + P +TY+ L+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 165 HLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLS 220
+ ARKV EM++ + YN L+ L ++ +F+ M L
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 221 PDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAY 280
PD ++ I +C D+ A+++ M ++P+ T+ +I+TLC +++ +AY
Sbjct: 276 PDAYSFAIFIHAYCD--AGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 281 DLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVT 340
L EM++ G +P+ TY +M + + ++A L M LP T
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP--------DRHT 385
Query: 341 YNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
YN ++ L +GR + A + GM E P +Y +I G +R+ GK E
Sbjct: 386 YNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGL--VRKKGKLEE 437
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 14/237 (5%)
Query: 163 LIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR-RLRLEDAVG---VFRGMTERD 218
L+H CDK H A++ + G PS TY+ L+R R+ DA G VF M ER+
Sbjct: 179 LLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN 238
Query: 219 LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE 278
D++ YN L+ CK D++ ++M EM + G+ PDA ++ I C +
Sbjct: 239 CVVDLLAYNALLDALCK--SGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHS 296
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSH 338
AY + M R+ + PN T+ ++ + A+ L DEM KG +P
Sbjct: 297 AYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGA--------NPDT 348
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
TYN+I+ C A +L M PD +Y V+ RI +A E+
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEI 405
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 7/251 (2%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+V TY+ LV + A + M ER +L+++NA++ LC G +
Sbjct: 204 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 263
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M L PD ++ IH +CD G A KVL M P+V T+N +I+ L
Sbjct: 264 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTL 323
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
+++DA + M ++ +PD TYN++++ C E + +A ++ + M LP
Sbjct: 324 CKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCE--VNRATKLLSRMDRTKCLP 381
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNA-YRIEGQFSKAFHL 317
D TY +++ L R A +++ M P TYT +++ R +G+ +A
Sbjct: 382 DRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRY 441
Query: 318 QDEMTHKGFLP 328
+ M +G P
Sbjct: 442 FEMMIDEGIPP 452
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 251 MVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQ 310
MV GI P D + L+ +LC ++ ++ A + F + +G+ P+ +TY+ L+ +
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
S A + DEM + + + YNA++ LC G + + + M +GL
Sbjct: 224 ASGARKVFDEMLERNCVVDL--------LAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 371 PDAVSYCTVILGFCRIREPGKAYEL 395
PDA S+ I +C + AY++
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKV 300
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 135/312 (43%), Gaps = 34/312 (10%)
Query: 25 LRNRLSPPNVI----IRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREA 80
L++R P ++ +RG+ G + SE++KV +L AG E V
Sbjct: 247 LKDRFEPDVIVYTNLVRGWCRAGEI-SEAEKVFKEMKL--AGIEPNV------------- 290
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
TY+ ++ A C ++ A + M + G PN I+FN +++ GR
Sbjct: 291 -------YTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEK 343
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M + PD TY LI C + A KVL+ MI + +T+N + R
Sbjct: 344 VLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFR 403
Query: 201 RL-RLEDAVGVFR---GMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
+ + D G R M E P+ VTYN L+ F K D+ +MK EM K +
Sbjct: 404 YIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM--VLKMKKEMDDKEV 461
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG-VSPNNETYTGLMNAYRIEGQFSKAF 315
P+ +TY L+ C + AY LF+EM+ ++P+ Y ++ R GQ K
Sbjct: 462 EPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHE 521
Query: 316 HLQDEMTHKGFL 327
L ++M KG +
Sbjct: 522 ELVEKMIQKGLV 533
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 131/317 (41%), Gaps = 15/317 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T+ L+ Y EA+ M + G P+ I+F+ V+ L K R +
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
+ PD YT+L+ +C G +A KV EM +G P+V TY+ +I L ++
Sbjct: 248 KDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQI 306
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
A VF M + +P+ +T+N L+ +K EK ++ +M G PD TY
Sbjct: 307 SRAHDVFADMLDSGCAPNAITFNNLMR--VHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI C + L A + M++ N T+ + + + A + +M
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMME- 423
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P+ VTYN ++ + L + + M + + P+ +Y ++ FC
Sbjct: 424 -------AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFC 476
Query: 385 RIREPGKAYELKVEVDE 401
+ AY+L E+ E
Sbjct: 477 GMGHWNNAYKLFKEMVE 493
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 191 SVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFE 246
S+ T+ LIRR +AV F M + PD + ++ +IS + + ++F
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSF- 243
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
+ + PD Y L+R C +SEA +F+EM G+ PN TY+ +++A
Sbjct: 244 --FDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC 301
Query: 307 IEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPE 366
GQ S+A H F +G +P+ +T+N ++ GR E+ L V M +
Sbjct: 302 RCGQISRA--------HDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKK 353
Query: 367 IGLSPDAVSYCTVILGFCR 385
+G PD ++Y +I CR
Sbjct: 354 LGCEPDTITYNFLIEAHCR 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 17/196 (8%)
Query: 204 LEDAVGVFRGMTERD----LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
L ++ F T RD SP YN +I K+++ DL A+ + M + +
Sbjct: 130 LHQSLAFFNWATSRDDYDHKSPH--PYNEMIDLSGKVRQFDL--AWHLIDLMKSRNVEIS 185
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
+T+ LIR SEA F M +G P+ ++ +++ + + S+A
Sbjct: 186 IETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEA----- 240
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
+ F F P + Y ++ G C G EA V + M G+ P+ +Y V
Sbjct: 241 ----QSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIV 296
Query: 380 ILGFCRIREPGKAYEL 395
I CR + +A+++
Sbjct: 297 IDALCRCGQISRAHDV 312
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 133/299 (44%), Gaps = 27/299 (9%)
Query: 40 TAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCC 99
T VGNL +K+ G +LL G + N+V TYN L+ +Y
Sbjct: 364 TMVGNL-GRAKQFGEINKLLDEMVRDGCKPNTV----------------TYNRLIHSYGR 406
Query: 100 DERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERT 159
+ EAM + M E G +P+ +++ ++ G + M + L+PD T
Sbjct: 407 ANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFT 466
Query: 160 YTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMT 215
Y+ +I+ GH A ++ EM+ G +P++ T+N +I + E A+ ++R M
Sbjct: 467 YSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQ 526
Query: 216 ERDLSPDVVTYNTLISKF--CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQ 273
PD VTY+ ++ C LE+A + AEM K +PD Y L+
Sbjct: 527 NAGFQPDKVTYSIVMEVLGHCGF----LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKA 582
Query: 274 QRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT 332
+ +A+ ++ ML+ G+ PN T L++ + + S+A++L M G P T
Sbjct: 583 GNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQT 641
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 110/249 (44%), Gaps = 14/249 (5%)
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLE 205
Q D TYT+++ G+ K+L EM+ G P+ TYNRLI R L+
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+A+ VF M E PD VTY TLI K D+ A +M M G+ PD TY
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDI--AMDMYQRMQEAGLSPDTFTYSV 469
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+I L L A+ LF EM+ G +PN T+ ++ + + A L +M +
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQN-- 527
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
GF P VTY+ ++ L G EEA GV M PD Y ++ + +
Sbjct: 528 ------AGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGK 581
Query: 386 IREPGKAYE 394
KA++
Sbjct: 582 AGNVDKAWQ 590
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 127/300 (42%), Gaps = 15/300 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY +V ++ E +L M G KPN +++N ++ + M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
+ PD TY +LI + G A + M ++G SP TY+ +I L L
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
A +F M + +P++VT+N +I+ K + + E A ++ +M + G PD TY
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKAR--NYETALKLYRDMQNAGFQPDKVTYS 538
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
++ L L EA +F EM R P+ Y L++ + G KA+ M
Sbjct: 539 IVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQA 598
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G P T N+++ + R EA +L+ M +GL P +Y T++L C
Sbjct: 599 GLRPNV--------PTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTY-TLLLSCC 649
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 96/235 (40%), Gaps = 17/235 (7%)
Query: 187 GFSPSVATYNRLIRRLRLEDAVG----VFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
GF TY ++ L G + M P+ VTYN LI + + L+
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANY--LK 411
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+A + +M G PD TY LI L A D+++ M G+SP+ TY+ ++
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
N G A L EM +G P VT +N +I E AL + R
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVT--------FNIMIALHAKARNYETALKLYR 523
Query: 363 GMPEIGLSPDAVSYCTV--ILGFCRIREPGKAYELKVEVDENMISWLGIWGLFED 415
M G PD V+Y V +LG C E + +++ +N + ++GL D
Sbjct: 524 DMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQ-RKNWVPDEPVYGLLVD 577
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 153/344 (44%), Gaps = 44/344 (12%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ T+N+L+ Y +A+ +L+ M GLKP+ S ++++Q + G +
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR-- 203
+ + L D T+LI ++ G+ AR V +M+D + ++ +N L+ L
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF-DMMD---AKNIVAWNSLVSGLSYA 304
Query: 204 --LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
L+DA + M + + PD +T+N+L S + L +P EKA ++ +M KG+ P+
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKP--EKALDVIGKMKEKGVAPNVV 362
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFS-----KAFH 316
++ + A +F +M GV PN T + L+ +I G S K H
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL---KILGCLSLLHSGKEVH 419
Query: 317 -----------------LQDEMTHKGFLPGFVTGF----SPSHVTYNAIIYGLCLLGRAE 355
L D G L + F + S ++N ++ G + GR E
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGE 479
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCR----IREPGKAYEL 395
E + M E G+ PDA+++ T +L C+ ++E K ++L
Sbjct: 480 EGIAAFSVMLEAGMEPDAITF-TSVLSVCKNSGLVQEGWKYFDL 522
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 25/306 (8%)
Query: 88 TTYNALV--LAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+N+LV L+Y C + EA+ I M + G+KP+ I++N++ G G+
Sbjct: 292 VAWNSLVSGLSYACLLKDAEALMIR--MEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M +K +AP+ ++T++ G+ A KV +M + G P+ AT + L++ L
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
L V ++L D L+ + K DL+ A E+ + +K +
Sbjct: 410 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYG--KSGDLQSAIEIFWGIKNKSLA---- 463
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
++ ++ + R E F ML G+ P+ T+T +++ + G + + D M
Sbjct: 464 SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLM 523
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+ G P+ + ++ L G +EA ++ M L PDA + L
Sbjct: 524 RSR-------YGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS---LKPDATIW-GAFL 572
Query: 382 GFCRIR 387
C+I
Sbjct: 573 SSCKIH 578
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 112/267 (41%), Gaps = 43/267 (16%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E E + + T+N+L Y + ++A+ ++ M E+G+ PN++S+ A+ G G
Sbjct: 318 EKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNF 377
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSL---------------IHLFCDKGHPGKARKVLSEM 183
M ++ + P+ T ++L +H FC + + V + +
Sbjct: 378 RNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATAL 437
Query: 184 ID----SG------------FSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDV 223
+D SG + S+A++N ++ R E+ + F M E + PD
Sbjct: 438 VDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDA 497
Query: 224 VTYNTLISKFCKLKEPDLE--KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYD 281
+T+ +++S CK E K F++ GI+P + ++ L L EA+D
Sbjct: 498 ITFTSVLS-VCKNSGLVQEGWKYFDLMRS--RYGIIPTIEHCSCMVDLLGRSGYLDEAWD 554
Query: 282 LFREMLRWGVSPNNETYTGLMNAYRIE 308
+ M + P+ + +++ +I
Sbjct: 555 FIQTM---SLKPDATIWGAFLSSCKIH 578
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 146/316 (46%), Gaps = 17/316 (5%)
Query: 84 VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX 143
V+ T+N ++ ++C + ++ EA+ + M + G+ PN++SFN ++ G C G M
Sbjct: 215 VENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQ 274
Query: 144 XXXXMNQKD---LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI- 199
M ++P+ TY S+I+ FC G A ++ +M+ SG + TY L+
Sbjct: 275 LLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVD 334
Query: 200 ---RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
R ++A+ + MT + L + V YN+++ + E D+E A + +M K +
Sbjct: 335 AYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIV--YWLFMEGDIEGAMSVLRDMNSKNM 392
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
D T ++R LC + EA + R++ + + + LM+ + + + + A
Sbjct: 393 QIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQ 452
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
+ M V G S +++ +I G G+ E AL + GM ++ + + V Y
Sbjct: 453 ILGSM--------LVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIY 504
Query: 377 CTVILGFCRIREPGKA 392
+++ G + G A
Sbjct: 505 NSIVNGLSKRGMAGAA 520
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 115/231 (49%), Gaps = 17/231 (7%)
Query: 178 KVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
KV EM G+ +V T+N +I + +L +A+ VF M + + P+VV++N +I
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 234 CKLKEPDLEKAFEMKAEM-VHKG--ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
CK D+ A ++ +M + G + P+A TY +I C RL A + +M++ G
Sbjct: 264 CK--TGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSG 321
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCL 350
V N TY L++AY G +A L DEMT KG + + V YN+I+Y L +
Sbjct: 322 VDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVV--------NTVIYNSIVYWLFM 373
Query: 351 LGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
G E A+ VLR M + D + V+ G CR +A E + ++ E
Sbjct: 374 EGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISE 424
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 75 RRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCG 134
R+I E +++V++ +N L+ + D+++ A IL M +GL + ISF ++ G
Sbjct: 420 RQISE-KKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLK 478
Query: 135 KGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
+G++ M + + + Y S+++ +G G A V++ M + T
Sbjct: 479 EGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVT 534
Query: 195 YNRL----IRRLRLEDAVGVFRGMTERD--LSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
YN L ++ +E+A + M ++D S +VT+N +I+ CK EKA E+
Sbjct: 535 YNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKF--GSYEKAKEVL 592
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
MV +G++PD+ TY LI + + + +L ++ GV+P+ Y ++
Sbjct: 593 KFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 37/367 (10%)
Query: 47 SESKKVGGAFELLKAGTEKGVESNSVSGR----------RIREAEQVVDETT-------- 88
S+ +V AFELL+ ++G+ + ++ ++ +A ++DE
Sbjct: 399 SKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDL 458
Query: 89 -TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
TYN LV + +E + I M G KPN ++ + +++GLC ++
Sbjct: 459 ITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSS 518
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----R 203
+ QK P+ + S + +C+ G KA K + + + Y +L L
Sbjct: 519 LEQK--CPENKA--SFVKGYCEAGLSKKAYKAFVRL---EYPLRKSVYIKLFFSLCIEGY 571
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
LE A V + M+ + P +I FCKL ++ +A + MV +G++PD TY
Sbjct: 572 LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLN--NVREAQVLFDTMVERGLIPDLFTY 629
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY-RIEGQFSKAFHLQDEMT 322
+I T C L +A LF +M + G+ P+ TYT L++ Y +++ + + +Q E+
Sbjct: 630 TIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVG 689
Query: 323 HKG---FLPGF-VTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
+ L F G V Y +I C + E+A + M + GL PD V+Y T
Sbjct: 690 KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTT 749
Query: 379 VILGFCR 385
+I + R
Sbjct: 750 LISSYFR 756
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 144/382 (37%), Gaps = 61/382 (15%)
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
A++ YC + + EA+G L M +GLK N + + ++Q C
Sbjct: 323 AVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDM 382
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE----DA 207
++ D Y G +A ++L EM D G P V Y LI L+ DA
Sbjct: 383 NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDA 442
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ + M +SPD++TYN L+S + E+ E+ M +G P+A T +I
Sbjct: 443 LDLIDEMIGNGMSPDLITYNVLVSGLARNGHE--EEVLEIYERMKAEGPKPNAVTNSVII 500
Query: 268 RTLCLQQRLSEAYDLF----------------------------REMLRWGVSPNNETYT 299
LC +++ EA D F + +R Y
Sbjct: 501 EGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYI 560
Query: 300 GLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALG 359
L + IEG KA + +M+ PG +I C L EA
Sbjct: 561 KLFFSLCIEGYLEKAHDVLKKMSAYRVEPG--------RSMCGKMIGAFCKLNNVREAQV 612
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFEDTRKS 419
+ M E GL PD +Y +I +CR+ E KA LFED ++
Sbjct: 613 LFDTMVERGLIPDLFTYTIMIHTYCRLNELQKA-----------------ESLFEDMKQR 655
Query: 420 LMQGLSNEDTFSSLMNDYLAQD 441
++ + T++ L++ YL D
Sbjct: 656 GIK--PDVVTYTVLLDRYLKLD 675
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 123/277 (44%), Gaps = 18/277 (6%)
Query: 128 VVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG 187
VV+G C + +M M + D ++I +C + +A L +M+ G
Sbjct: 289 VVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKG 348
Query: 188 FSPSVATYNRLIR-RLRLE---DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEK 243
+ + +++ +++ +A+ F+ + ++ D V YN KL +E+
Sbjct: 349 LKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGR--VEE 406
Query: 244 AFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMN 303
AFE+ EM +GI+PD Y LI CLQ ++ +A DL EM+ G+SP+ TY L++
Sbjct: 407 AFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVS 466
Query: 304 AYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRG 363
G + + + M +G P P+ VT + II GLC + +EA
Sbjct: 467 GLARNGHEEEVLEIYERMKAEG--P------KPNAVTNSVIIEGLCFARKVKEAEDFFSS 518
Query: 364 MPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD 400
+ + A + + G+C KAY+ V ++
Sbjct: 519 LEQKCPENKA----SFVKGYCEAGLSKKAYKAFVRLE 551
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 15/214 (7%)
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
LC +G + M+ + P +I FC + +A+ + M++ G P
Sbjct: 565 SLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIP 624
Query: 191 SVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE---- 242
+ TY +I R L+ A +F M +R + PDVVTY L+ ++ KL E
Sbjct: 625 DLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSV 684
Query: 243 -------KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
KA E+ E GI D Y LI C L +A +LF M+ G+ P+
Sbjct: 685 QGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDM 744
Query: 296 ETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG 329
YT L+++Y +G A L E++ K +P
Sbjct: 745 VAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPS 778
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 19/216 (8%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
+ Y L + C + +++A +L+ M+ ++P ++ C +
Sbjct: 557 SVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDT 616
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI-RRLRLE- 205
M ++ L PD TYT +IH +C KA + +M G P V TY L+ R L+L+
Sbjct: 617 MVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDP 676
Query: 206 ---------------DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAE 250
A V R + + DVV Y LI + CK+ +LE+A E+
Sbjct: 677 EHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMN--NLEQAAELFDR 734
Query: 251 MVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM 286
M+ G+ PD Y LI + + + A L E+
Sbjct: 735 MIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTEL 770
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 124 SFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM 183
S+ ++++ LCG G+ +++K + D Y ++ + +M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 184 IDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP 239
G SP + TYN LI R +++A+ +F + D PD+++YN+LI+ C K
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN--CLGKNG 526
Query: 240 DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT 299
D+++A EM KG+ PD TY L+ +R+ AY LF EML G PN TY
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586
Query: 300 GLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT 332
L++ G+ ++A L +M +G P +T
Sbjct: 587 ILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSIT 619
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 141/323 (43%), Gaps = 46/323 (14%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX----XXXXXX 145
YN L+ + VD+A+ + M E G +PN +++ ++ L +G++
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISK 367
Query: 146 XXMNQKDLAPDERTYTSLIH------LFCD----------------------KGHPGKAR 177
M Q + RT + L H LFCD G +A
Sbjct: 368 RYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAI 427
Query: 178 KVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
++LS++ + G YN + L ++ +F M + SPD+ TYN LI+ F
Sbjct: 428 EMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
++ E D +A + E+ PD +Y LI L + EA+ F+EM G++P
Sbjct: 488 GRVGEVD--EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNP 545
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
+ TY+ LM + + A+ L +EM V G P+ VTYN ++ L GR
Sbjct: 546 DVVTYSTLMECFGKTERVEMAYSLFEEM--------LVKGCQPNIVTYNILLDCLEKNGR 597
Query: 354 AEEALGVLRGMPEIGLSPDAVSY 376
EA+ + M + GL+PD+++Y
Sbjct: 598 TAEAVDLYSKMKQQGLTPDSITY 620
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 6/220 (2%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
E +Y +++ + C + EA+ +L + E+G+ + + +N V L ++
Sbjct: 406 ERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M + +PD TY LI F G +A + E+ S P + +YN LI L
Sbjct: 466 EKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKN 525
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+++A F+ M E+ L+PDVVTY+TL+ F K + +E A+ + EM+ KG P+
Sbjct: 526 GDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER--VEMAYSLFEEMLVKGCQPNIV 583
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
TY L+ L R +EA DL+ +M + G++P++ TYT L
Sbjct: 584 TYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 143/299 (47%), Gaps = 19/299 (6%)
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX-XXMNQKDLAPDERTY 160
+ DEA+G+ M GL N++ +N ++Q L KG+M M + P+E TY
Sbjct: 285 KCDEAVGLFNEMITEGLTLNVVGYNTLMQVL-AKGKMVDKAIQVFSRMVETGCRPNEYTY 343
Query: 161 TSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTE 216
+ L++L +G + V+ E+ + + +Y L+R L + +A +F M
Sbjct: 344 SLLLNLLVAEGQLVRLDGVV-EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWS 400
Query: 217 RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRL 276
+ + +Y +++ C + +A EM +++ KG++ D Y + L +++
Sbjct: 401 FPVKGERDSYMSMLESLCGAGKTI--EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQI 458
Query: 277 SEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSP 336
S +DLF +M + G SP+ TY L+ ++ G+ +A ++ +E+ + P
Sbjct: 459 SHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER--------SDCKP 510
Query: 337 SHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
++YN++I L G +EA + M E GL+PD V+Y T++ F + AY L
Sbjct: 511 DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSL 569
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 13/218 (5%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
VV +T YN + A +++ + M + G P++ ++N ++ G +
Sbjct: 438 VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAI 497
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI--- 199
+ + D PD +Y SLI+ G +A EM + G +P V TY+ L+
Sbjct: 498 NIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECF 557
Query: 200 -RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
+ R+E A +F M + P++VTYN L+ C K +A ++ ++M +G+ P
Sbjct: 558 GKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD--CLEKNGRTAEAVDLYSKMKQQGLTP 615
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFRE---MLRWGVSP 293
D+ TY L R Q +S R + W VSP
Sbjct: 616 DSITYTVLERL----QSVSHGKSRIRRKNPITGWVVSP 649
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 136/319 (42%), Gaps = 22/319 (6%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY L+ AY +A + + G K ++ ++N ++ L + M
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDM 261
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR----L 204
++ DE TYT +I G +A + +EMI G + +V YN L++ L +
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE-PDLEKAFEMKAEMVHKGILPDADTY 263
+ A+ VF M E P+ TY+ L++ + L+ E+ + +GI Y
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGI------Y 375
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
L+RTL +SEA+ LF +M + V ++Y ++ + G+ +A + ++
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE 435
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
KG + + YN + L L + + M + G SPD +Y +I F
Sbjct: 436 KGVVT--------DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 384 CRIREPGKAYELKVEVDEN 402
R+ E +A + E++ +
Sbjct: 488 GRVGEVDEAINIFEELERS 506
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 128/322 (39%), Gaps = 34/322 (10%)
Query: 101 ERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTY 160
+R D IL M + + N+ + N ++ G + + DL + TY
Sbjct: 150 DRFDRVRSILDSMVKSNVHGNISTVNILIGFF---GNTEDLQMCLRLVKKWDLKMNSFTY 206
Query: 161 TSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL-RLEDAVGVFRGMTERDL 219
L+ + KA V E+ G + YN L+ L + E A VF M +R
Sbjct: 207 KCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHC 266
Query: 220 SPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEA 279
D TY +I ++ + D +A + EM+ +G+ + Y L++ L + + +A
Sbjct: 267 RRDEYTYTIMIRTMGRIGKCD--EAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 280 YDLFREMLRWGVSPNNETYTGLMNAYRIEGQ--------------------------FSK 313
+F M+ G PN TY+ L+N EGQ SK
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSK 384
Query: 314 AFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
H+ + H+ F + +Y +++ LC G+ EA+ +L + E G+ D
Sbjct: 385 LGHVSE--AHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 374 VSYCTVILGFCRIREPGKAYEL 395
+ Y TV ++++ ++L
Sbjct: 443 MMYNTVFSALGKLKQISHIHDL 464
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 135/300 (45%), Gaps = 18/300 (6%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+T +NAL+ C ++ + +A + + + +P+L +FN + L G
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNIL---LSGWKSSEEAEAFF 234
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRL- 204
M K L PD TY SLI ++C KA K++ +M + +P V TY +I L L
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 205 ---EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+ A V + M E PDV YN I FC + L A ++ EMV KG+ P+A
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARR--LGDADKLVDEMVKKGLSPNAT 352
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
TY R L L L +++L+ ML PN ++ L+ ++ + A L ++M
Sbjct: 353 TYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
V GF + + ++ LC L + EEA L M E G P VS+ + L
Sbjct: 413 V--------VKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKL 464
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 193 ATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
A +N L+R L + DA V+ + + PD+ T+N L+S + K E EMK
Sbjct: 181 ACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW-KSSEEAEAFFEEMK 238
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
KG+ PD TY LI C + + +AY L +M +P+ TYT ++ +
Sbjct: 239 G----KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 309 GQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIG 368
GQ KA + EM G P YNA I C+ R +A ++ M + G
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAA--------YNAAIRNFCIARRLGDADKLVDEMVKKG 346
Query: 369 LSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
LSP+A +Y + G+++EL V +
Sbjct: 347 LSPNATTYNLFFRVLSLANDLGRSWELYVRM 377
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 45/182 (24%)
Query: 254 KGILPDA-DT--YEPLIRTLCLQQRLSEAYDLFREMLR---------------W------ 289
K ++PD DT + L+RTLC ++ +++A +++ + W
Sbjct: 171 KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEA 230
Query: 290 ----------GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHV 339
G+ P+ TY L++ Y + + KA+ L D+M + +P +
Sbjct: 231 EAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEE--------TPDVI 282
Query: 340 TYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
TY +I GL L+G+ ++A VL+ M E G PD +Y I FC R G A +L V
Sbjct: 283 TYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKL---V 339
Query: 400 DE 401
DE
Sbjct: 340 DE 341
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 17/244 (6%)
Query: 149 NQKDLAPDERTYTSLIHLFC--DKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
+Q + P T+ L+ C +VL+ M+++G P T + +R L
Sbjct: 114 SQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETG 173
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK-GILPDAD 261
R+++A + + +TE+ PD TYN L+ CK K DL +E EM + PD
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK--DLHVVYEFVDEMRDDFDVKPDLV 231
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
++ LI +C + L EA L ++ G P+ Y +M + + S+A + +M
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+G P +TYN +I+GL GR EEA L+ M + G PD +Y +++
Sbjct: 292 KEEGV--------EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Query: 382 GFCR 385
G CR
Sbjct: 344 GMCR 347
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 10/219 (4%)
Query: 93 LVLAYCC---DERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
++L++ C D + +L M GL+P+ ++ + V+ LC GR+ +
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS-GFSPSVATYNRLIRRL----RL 204
+K PD TY L+ C + + EM D P + ++ LI + L
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+A+ + + PD YNT++ FC L + +A + +M +G+ PD TY
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG--SEAVGVYKKMKEEGVEPDQITYN 304
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMN 303
LI L R+ EA + M+ G P+ TYT LMN
Sbjct: 305 TLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 8/192 (4%)
Query: 85 DETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXX 144
D+ TT + V + C RVDEA +++ +TE+ P+ ++N +++ LC +
Sbjct: 158 DQVTT-DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 145 XXXMNQK-DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL- 202
M D+ PD ++T LI C+ + +A ++S++ ++GF P YN +++
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 203 ---RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+ +AVGV++ M E + PD +TYNTLI F K +E+A MV G PD
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLI--FGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 260 ADTYEPLIRTLC 271
TY L+ +C
Sbjct: 335 TATYTSLMNGMC 346
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL-RLED 206
M L PD+ T + C+ G +A+ ++ E+ + P TYN L++ L + +D
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 207 AVGVFRGMTER----DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
V+ + E D+ PD+V++ LI C K +L +A + +++ + G PD
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSK--NLREAMYLVSKLGNAGFKPDCFL 267
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y +++ C + SEA ++++M GV P+ TY L+ G+ +A
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA-------- 319
Query: 323 HKGFLPGFV-TGFSPSHVTYNAIIYGLCLLG 352
+ +L V G+ P TY +++ G+C G
Sbjct: 320 -RMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 25/250 (10%)
Query: 204 LEDAVGVFRGM--TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+ D V +F+ + ++ + P T+ L+S C+ + + + MV+ G+ PD
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQV 160
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
T + +R+LC R+ EA DL +E+ P+ TY L+ + DEM
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM 220
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
P V++ +I +C EA+ ++ + G PD Y T++
Sbjct: 221 RDD-------FDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 382 GFCRIREPGKAY-------ELKVEVDE----NMISWLGIWGLFEDTR---KSLMQGLSNE 427
GFC + + +A E VE D+ +I L G E+ R K+++
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP 333
Query: 428 D--TFSSLMN 435
D T++SLMN
Sbjct: 334 DTATYTSLMN 343
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
+R+ V + ++ L+ C + + EAM ++ + G KP+ +N +++G C
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
+ M ++ + PD+ TY +LI G +AR L M+D+G+ P ATY
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 197 RLI 199
L+
Sbjct: 340 SLM 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 70 NSVSGRRIREAEQVVDETTT---------YNALVLAYCCDERVDEAMGILRCMTERGLKP 120
N + + +REA +V + YN ++ +C + EA+G+ + M E G++P
Sbjct: 239 NVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEP 298
Query: 121 NLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKG 171
+ I++N ++ GL GR+ M PD TYTSL++ C KG
Sbjct: 299 DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 135/314 (42%), Gaps = 15/314 (4%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T T+N L +C D E L M E G +P+L+++N +V C +GR+
Sbjct: 236 TYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYK 295
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRL 202
M ++ + PD TYTSLI C G +A + M+D G P +YN LI +
Sbjct: 296 IMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEG 355
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
++ + + M + PD T ++ F ++E L A E+ + +
Sbjct: 356 MMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF--VREGRLLSAVNFVVELRRLKVDIPFEV 413
Query: 263 YEPLIRTLCLQQRLSEAYDLFREML-RWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+ LI +LC + + A L ++ G ETY L+ + S+ +++ +
Sbjct: 414 CDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIES------LSRCDAIEEAL 467
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
KG L TY A+I LC +GR EA ++ M + + PD+ ++
Sbjct: 468 VLKGKLKNQNQVLDAK--TYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVY 525
Query: 382 GFCRIREPGKAYEL 395
G+C+ + KA L
Sbjct: 526 GYCKELDFDKAERL 539
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 143/340 (42%), Gaps = 55/340 (16%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E E + TYN LV +YC R+ EA + + M R + P+L+++ ++++GLC GR+
Sbjct: 263 EEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRV 322
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP-------- 190
M + + PD +Y +LI+ +C +G +++K+L EM+ + P
Sbjct: 323 REAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVI 382
Query: 191 -----------SVATYNRLIRRLRLEDAVGVF---------------------RGMTERD 218
S + +RRL+++ V R + E
Sbjct: 383 VEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEG 442
Query: 219 LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE 278
TYN LI + +E+A +K ++ ++ + DA TY LI LC R E
Sbjct: 443 HEAKPETYNNLIESLSRCDA--IEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNRE 500
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD--EMTHKGFLPGFVTGFSP 336
A L EM V P++ L+ Y E F KA L M + F P
Sbjct: 501 AESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPE------- 553
Query: 337 SHVTYNAIIYGLCLLGRA-EEALGVLRGMPEIGLSPDAVS 375
+YN+++ +C G ++AL + M +G P+ ++
Sbjct: 554 ---SYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLT 590
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 152/347 (43%), Gaps = 36/347 (10%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ ++ LV Y V+E + R + + G ++++ N ++ GL M
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RR 201
M + + P+ T+ L ++FC+ + + L +M + GF P + TYN L+ RR
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
RL++A +++ M R + PD+VTY +LI C K+ + +A + MV +GI PD
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLC--KDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+Y LI C + + ++ L EML V P+ T ++ + EG+ A + E+
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL 402
Query: 322 TH-KGFLPGFVTG------------FSPSHV---------------TYNAIIYGLCLLGR 353
K +P V F+ H+ TYN +I L
Sbjct: 403 RRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDA 462
Query: 354 AEEALGVLRG-MPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
EEAL VL+G + DA +Y +I CRI +A L E+
Sbjct: 463 IEEAL-VLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 142/348 (40%), Gaps = 31/348 (8%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YN ++ C + R +E++ +L M + G++P+ + N + L + M
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR 536
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGF----SPSVATYNRLIRRLRLE 205
P + T L+ C+ G A K L ++ GF S A + LI+ ++
Sbjct: 537 FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVD 596
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCK---LKEPDLEKAFEMKAEMVHKGILPDADT 262
+ +FR + PDV+ Y+ LI CK E D+ + EMV KG+ P T
Sbjct: 597 RGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADI-----LFNEMVSKGLKPTVAT 651
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y +I C + + M +P+ TYT L++ G+ S+A +EM
Sbjct: 652 YNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMK 711
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC----- 377
K P + +T+ A+I GLC G + EAL R M E + PD+ Y
Sbjct: 712 GKDCYP--------NRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSS 763
Query: 378 -----TVILGFCRIREPGKAYELKVEVDENMISWLGIWGLF-EDTRKS 419
+ GF RE V VD N + + + F ED R S
Sbjct: 764 FLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSKFVEDLRTS 811
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 18/319 (5%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
+ N LV A +VD A+ +L + + GL P + +N +++G+C +GR
Sbjct: 443 SIVINCLVKA----NKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLG 498
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M + P + T + ++ A +L +M GF P + L+++L
Sbjct: 499 EMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENG 558
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
R DA + +V I +K +++ E+ ++ G PD
Sbjct: 559 RAVDACKYLDDVAGEGFLGHMVASTAAIDGL--IKNEGVDRGLELFRDICANGHCPDVIA 616
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y LI+ LC R EA LF EM+ G+ P TY +++ + EG+ + M
Sbjct: 617 YHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM- 675
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
+ +P +TY ++I+GLC GR EA+ M P+ +++ +I G
Sbjct: 676 -------YEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQG 728
Query: 383 FCRIREPGKAYELKVEVDE 401
C+ G+A E++E
Sbjct: 729 LCKCGWSGEALVYFREMEE 747
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 6/177 (3%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ Y+ L+ A C R EA + M +GLKP + ++N+++ G C +G +
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M + + PD TYTSLIH C G P +A +EM P+ T+ LI+ L
Sbjct: 673 VRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKC 732
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
+A+ FR M E+++ PD Y +L+S L ++ F + EMVHKG P
Sbjct: 733 GWSGEALVYFREMEEKEMEPDSAVYLSLVSS--FLSSENINAGFGIFREMVHKGRFP 787
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Query: 103 VDEAMGILRCMTERGL-KPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD--LAPDERT 159
VDEA + + E GL PN ++N +++ + +D D+ T
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFT 216
Query: 160 YTSLIHLFCDKGHPGKARKVLSEMIDSGF---SPSVATYNRLIRRLRLEDAVGVFRGMTE 216
T ++ ++C+ G +A V +E++ G+ S + +++ A + + E
Sbjct: 217 LTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEE 276
Query: 217 RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRL 276
RD+ + TY LI F +KE ++KAF++ +M G+ D Y+ LI LC + L
Sbjct: 277 RDIRLNYKTYCVLIHGF--VKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDL 334
Query: 277 SEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK 313
A L+ E+ R G+ P+ L+ ++ E + S+
Sbjct: 335 EMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSR 371
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 130/338 (38%), Gaps = 66/338 (19%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T ++ YC + + A+ + + RG IS +V C G++ +
Sbjct: 216 TLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEML 274
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
++D+ + +TY LIH F + KA ++ +M G + +A Y+ LI + L
Sbjct: 275 EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDL 334
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE---------PDLEKA---------FE 246
E A+ ++ + + PD L+ F + E D++K FE
Sbjct: 335 EMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFE 394
Query: 247 --MKAEMVH-----------------------------KGILPDADTYEPLIRTLCLQQR 275
++ ++VH K ILPD+D+ +I L +
Sbjct: 395 GFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANK 454
Query: 276 LSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFS 335
+ A L ++++ G+ P Y ++ EG+ ++ L EM G
Sbjct: 455 VDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKD--------AGVE 506
Query: 336 PSHVTYNAIIYGLCLLGRAE--EALGVLRGMPEIGLSP 371
PS T N IYG CL R + AL +L+ M G P
Sbjct: 507 PSQFTLNC-IYG-CLAERCDFVGALDLLKKMRFYGFEP 542
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 14/260 (5%)
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
Q+ D Y ++ + + ++ ++++S S + IR L ++
Sbjct: 99 QEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVD 158
Query: 206 DAVGVFRGMTERDLS-PDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+A VF + E L P+ TYN L+ K +E EM G D T
Sbjct: 159 EASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLT 218
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
P+++ C + A +F E+L G + T L+ ++ GQ KAF L + + +
Sbjct: 219 PVLQVYCNTGKSERALSVFNEILSRG-WLDEHISTILVVSFCKWGQVDKAFELIEMLEER 277
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
++ TY +I+G R ++A + M +G++ D Y +I G C
Sbjct: 278 DI--------RLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC 329
Query: 385 RIREPGKAYELKVEVDENMI 404
+ ++ A L +E+ + I
Sbjct: 330 KHKDLEMALSLYLEIKRSGI 349
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 136/327 (41%), Gaps = 40/327 (12%)
Query: 104 DEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSL 163
DEA+ IL + RG +P+ ++ ++V+ LC GR PDERT +
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 164 IHLFCDKGHPGKARKVLSEMI--DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTER 217
I P V+ +I F PS+ YNRL+ +L R+ DA + M R
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
PDVVT+ TLI +C+++E LE A ++ EM GI P++ T LI + +
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRE--LEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVE 249
Query: 278 EAYDLFREMLRW-----GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT-----HKGFL 327
L +E+ + S + L+++ EG F+ F + + M+ + F
Sbjct: 250 TGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFA 309
Query: 328 PGFVT----------------------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMP 365
G + G P +YNAII+GLC G A +L
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Query: 366 EIGLSPDAVSYCTVILGFCRIREPGKA 392
E P +Y ++ C+ + GKA
Sbjct: 370 EFEFFPSEYTYKLLMESLCKELDTGKA 396
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 170/419 (40%), Gaps = 50/419 (11%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSG---RRIRE---------A 80
+V+I GF + ++++ K + +E +K T+ +++ + + RE A
Sbjct: 236 SVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIA 295
Query: 81 EQV-----VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
E + V+ Y ++ + C R A I+ M +GLKP S+NA++ GLC
Sbjct: 296 ENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKD 355
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
G ++ + P E TY L+ C + GKAR VL M+ + Y
Sbjct: 356 GGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIY 415
Query: 196 NRLIRRLRLED----AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM 251
N +R L + D + V M + D PD T NT+I+ CK+ D + + M
Sbjct: 416 NIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVD-DAMKVLDDMM 474
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREML-----RWGVSPNNETYTGLMNAYR 306
K PDA T ++ L Q R EA D+ ++ + GV N GL ++
Sbjct: 475 TGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHK 534
Query: 307 ------IEGQFSKAFHLQDEMTHKGFLPGF---------------VTGFSPSH--VTYNA 343
+ GQ KA D T+ + G V S H Y A
Sbjct: 535 GDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAA 594
Query: 344 IIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
+ GLC G +A L + + G P+ V Y TVI R +AY++ E+ +N
Sbjct: 595 FLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKN 653
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 143/361 (39%), Gaps = 39/361 (10%)
Query: 22 STCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAE 81
S L+ R + N II G G A++LL+ G+E
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMR-------AYQLLEEGSEF---------------- 371
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
+ TY L+ + C + +A +L M + +N ++GLC
Sbjct: 372 EFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEI 431
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGF-SPSVATYNR--- 197
M Q D PDE T ++I+ C G A KVL +M+ F +P T N
Sbjct: 432 LNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMC 491
Query: 198 -LIRRLRLEDAVGVF-RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
L+ + R E+A+ V R M E + P VV YN +I KL + D +A + ++
Sbjct: 492 GLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGD--EAMSVFGQLEKAS 549
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
+ D+ TY +I LC+ ++ A + +++ + Y + G S A
Sbjct: 550 VTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDAC 609
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVS 375
H ++ G +P V YN +I G EA +L M + G +PDAV+
Sbjct: 610 HFLYDLADSGAIPNVVC--------YNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVT 661
Query: 376 Y 376
+
Sbjct: 662 W 662
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 9/175 (5%)
Query: 222 DVVTYNTLISKFCKLK-EPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAY 280
D + I C ++ PD +A + + +G PD+ +I +LC R EA+
Sbjct: 53 DRAYWRRRIHSICAVRRNPD--EALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAH 110
Query: 281 DLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVT 340
F L G P+ T N +S++ + H+ L GF F PS
Sbjct: 111 RRFLLFLASGFIPDERT----CNVIIARLLYSRSPVSTLGVIHR--LIGFKKEFVPSLTN 164
Query: 341 YNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
YN ++ LC + R +A ++ M G PD V++ T+I G+C IRE A+++
Sbjct: 165 YNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 28/316 (8%)
Query: 35 IIRGFTAVGNLQSESKKVGGAFELL-KAGTEKGVESNSV------SGRRIREAE------ 81
I+R F G E ++ G F+ L + G EK ES ++ +R+ +A
Sbjct: 161 IMRRFAGAG----EWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 82 --QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
+ T+N + +C RV+EA+ ++ M G +P +IS+ +++ C +
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI 199
M P+ TYT+++ + +A +V + M SG P YN LI
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 200 RRL----RLEDAVGVFR-GMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
L RLE+A VFR M E +S + TYN++I+ +C E D KA E+ EM
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEED--KAIELLKEMESS 394
Query: 255 GIL-PDADTYEPLIRTLCLQQRLSEAYDLFREML-RWGVSPNNETYTGLMNAYRIEGQFS 312
+ PD TY+PL+R+ + + E L +EM+ + +S + TYT L+
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCE 454
Query: 313 KAFHLQDEMTHKGFLP 328
A+ L +EM + P
Sbjct: 455 WAYCLFEEMISQDITP 470
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 40/264 (15%)
Query: 174 GKARKV--LSEMIDSGFSPSVATYN---RLIRRL----RLEDAVGVFRGMTERDLSPDVV 224
GKA+K + E ++ + T N +++RR E+AVG+F + E L +
Sbjct: 132 GKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE 191
Query: 225 TYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFR 284
+ N L+ CK K + + ++ + I P+A T+ I C R+ EA +
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVLLQ---LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQ 248
Query: 285 EMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT------------ 332
EM G P +YT ++ Y + +F K + + EM G P +T
Sbjct: 249 EMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQK 308
Query: 333 ---------------GFSPSHVTYNAIIYGLCLLGRAEEALGVLR-GMPEIGLSPDAVSY 376
G P + YN +I+ L GR EEA V R MPE+G+S + +Y
Sbjct: 309 EFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTY 368
Query: 377 CTVILGFCRIREPGKAYELKVEVD 400
++I +C E KA EL E++
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEME 392
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 226 YNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFRE 285
Y+ + K K+ D K F E + L +T ++R EA +F
Sbjct: 124 YDMAVDILGKAKKWDRMKEF---VERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDR 180
Query: 286 MLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAII 345
+ +G+ N E+ L++ E + +A + L + +P+ T+N I
Sbjct: 181 LGEFGLEKNTESMNLLLDTLCKEKRVEQA---------RVVLLQLKSHITPNAHTFNIFI 231
Query: 346 YGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
+G C R EEAL ++ M G P +SY T+I +C+ E K YE+ E++ N
Sbjct: 232 HGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 28/316 (8%)
Query: 35 IIRGFTAVGNLQSESKKVGGAFELL-KAGTEKGVESNSV------SGRRIREAE------ 81
I+R F G E ++ G F+ L + G EK ES ++ +R+ +A
Sbjct: 161 IMRRFAGAG----EWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 82 --QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
+ T+N + +C RV+EA+ ++ M G +P +IS+ +++ C +
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI 199
M P+ TYT+++ + +A +V + M SG P YN LI
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 200 RRL----RLEDAVGVFR-GMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
L RLE+A VFR M E +S + TYN++I+ +C E D KA E+ EM
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEED--KAIELLKEMESS 394
Query: 255 GIL-PDADTYEPLIRTLCLQQRLSEAYDLFREML-RWGVSPNNETYTGLMNAYRIEGQFS 312
+ PD TY+PL+R+ + + E L +EM+ + +S + TYT L+
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCE 454
Query: 313 KAFHLQDEMTHKGFLP 328
A+ L +EM + P
Sbjct: 455 WAYCLFEEMISQDITP 470
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 40/264 (15%)
Query: 174 GKARKV--LSEMIDSGFSPSVATYN---RLIRRL----RLEDAVGVFRGMTERDLSPDVV 224
GKA+K + E ++ + T N +++RR E+AVG+F + E L +
Sbjct: 132 GKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE 191
Query: 225 TYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFR 284
+ N L+ CK K + + ++ + I P+A T+ I C R+ EA +
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVLLQ---LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQ 248
Query: 285 EMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT------------ 332
EM G P +YT ++ Y + +F K + + EM G P +T
Sbjct: 249 EMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQK 308
Query: 333 ---------------GFSPSHVTYNAIIYGLCLLGRAEEALGVLR-GMPEIGLSPDAVSY 376
G P + YN +I+ L GR EEA V R MPE+G+S + +Y
Sbjct: 309 EFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTY 368
Query: 377 CTVILGFCRIREPGKAYELKVEVD 400
++I +C E KA EL E++
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEME 392
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 226 YNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFRE 285
Y+ + K K+ D K F E + L +T ++R EA +F
Sbjct: 124 YDMAVDILGKAKKWDRMKEF---VERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDR 180
Query: 286 MLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAII 345
+ +G+ N E+ L++ E + +A + L + +P+ T+N I
Sbjct: 181 LGEFGLEKNTESMNLLLDTLCKEKRVEQA---------RVVLLQLKSHITPNAHTFNIFI 231
Query: 346 YGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDEN 402
+G C R EEAL ++ M G P +SY T+I +C+ E K YE+ E++ N
Sbjct: 232 HGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 118/281 (41%), Gaps = 26/281 (9%)
Query: 75 RRIREAEQVVDETTTYNALVLAYCCDER--VDEAMGILRCMTERGLKPNLISFNAVVQGL 132
R++ E + TT + L C E V EA+ M E KP++ ++N ++ L
Sbjct: 151 RQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINAL 210
Query: 133 CGKGRMXXXXXXXXXMNQKDL--APDERTYTSLIHLFCDKGHPGKARKVLS--------- 181
C G M PD TYT LI +C G RK +
Sbjct: 211 CRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRM 270
Query: 182 --EMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK 235
EM+ GF P V TYN LI + R+ A+ +F M + P+ VTYN+ I +
Sbjct: 271 FREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSV 330
Query: 236 LKEPDLEKAFEMKAEMVHKGI-LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
E +E A EM M G +P + TY PLI L +R +EA DL EM+ G+ P
Sbjct: 331 TNE--IEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPR 388
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFS 335
TY + +A EG S DE HK G +S
Sbjct: 389 EYTYKLVCDALSSEGLASTL----DEELHKRMREGIQQRYS 425
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 105/280 (37%), Gaps = 48/280 (17%)
Query: 109 ILRCMTERGLKPNLI---SFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIH 165
LR ++ R N++ S +++ L +G + M + PD Y ++I+
Sbjct: 149 FLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIIN 208
Query: 166 LFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVT 225
C G+ KAR +L +M GF PD T
Sbjct: 209 ALCRVGNFKKARFLLDQMQLPGFR-----------------------------YPPDTYT 239
Query: 226 YNTLISKFC---------KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRL 276
Y LIS +C K + +A M EM+ +G +PD TY LI C R+
Sbjct: 240 YTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRI 299
Query: 277 SEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSP 336
A +LF +M G PN TY + Y + + A + M G P
Sbjct: 300 GRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGH-------GVP 352
Query: 337 SHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
TY +I+ L RA EA ++ M E GL P +Y
Sbjct: 353 GSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTY 392
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 81/194 (41%), Gaps = 36/194 (18%)
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL--PDAD 261
+++A+ F M E PDV YNT+I+ C++ + +KA + +M G PD
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVG--NFKKARFLLDQMQLPGFRYPPDTY 238
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
TY LI + C R+G+ TG A I + +A + EM
Sbjct: 239 TYTILISSYC----------------RYGMQ------TGCRKA--IRRRMWEANRMFREM 274
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+GF+P VT YN +I G C R AL + M G P+ V+Y + I
Sbjct: 275 LFRGFVPDVVT--------YNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIR 326
Query: 382 GFCRIREPGKAYEL 395
+ E A E+
Sbjct: 327 YYSVTNEIEGAIEM 340
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 125/289 (43%), Gaps = 20/289 (6%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK-GRMXXXXXXXXXM 148
+ +L+ A C + V +A ++ C ++ + SFN V+ G C G M
Sbjct: 235 FQSLLSALCRYKNVSDAGHLIFCNKDK-YPFDAKSFNIVLNGWCNVIGSPREAERVWMEM 293
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAV 208
+ D +Y+S+I + G K K+ M P YN ++ L V
Sbjct: 294 GNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFV 353
Query: 209 GVFRGMT-----ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
R + E+ + P+VVTYN+LI CK ++ E+A ++ EM+ KG+ P TY
Sbjct: 354 SEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKT--EEAKQVFDEMLEKGLFPTIRTY 411
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
+R L + E ++L +M + G P ETY L+ F L DEM
Sbjct: 412 HAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKE 468
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
K P +Y +I+GL L G+ EEA G + M + G+ P+
Sbjct: 469 KTV--------GPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 78 REAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAV 128
REAE+V E +Y++++ Y +++ + + M + ++P+ +NAV
Sbjct: 284 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAV 343
Query: 129 VQGLCGKGRMXXXXXXXXXMNQ-KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG 187
V L + M + K + P+ TY SLI C +A++V EM++ G
Sbjct: 344 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKG 403
Query: 188 FSPSVATYNRLIRRLRL-EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFE 246
P++ TY+ +R LR E+ + M + P V TY LI K C+ + D +
Sbjct: 404 LFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWR--DFDNVLL 461
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
+ EM K + PD +Y +I L L ++ EAY ++EM G+ PN
Sbjct: 462 LWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 18/296 (6%)
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
++ YC V +A+ L+ + F +++ LC + + N+
Sbjct: 203 MIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALC-RYKNVSDAGHLIFCNKDK 261
Query: 153 LAPDERTYTSLIHLFCDK-GHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDA 207
D +++ +++ +C+ G P +A +V EM + G V +Y+ +I + L
Sbjct: 262 YPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKV 321
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ +F M + + PD YN ++ K + MK KGI P+ TY LI
Sbjct: 322 LKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNL-MKTMEEEKGIEPNVVTYNSLI 380
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
+ LC ++ EA +F EML G+ P TY M RI + F L +M
Sbjct: 381 KPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM---RILRTGEEVFELLAKMRK---- 433
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
G P+ TY +I LC + L + M E + PD SY +I G
Sbjct: 434 ----MGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGL 485
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Query: 158 RTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR-------LEDAVGV 210
R Y S+I + A ++ EM FSPS+ L+ +R + A+
Sbjct: 162 REYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDVGKAINT 219
Query: 211 FRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP-DADTYEPLIRT 269
F L + + +L+S C+ K ++ A + +K P DA ++ ++
Sbjct: 220 FHAYKRFKLEMGIDDFQSLLSALCRYK--NVSDAGHLI--FCNKDKYPFDAKSFNIVLNG 275
Query: 270 LC-LQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
C + EA ++ EM GV + +Y+ +++ Y G +K L D M +
Sbjct: 276 WCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECI-- 333
Query: 329 GFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPE-IGLSPDAVSYCTVILGFCRIR 387
P YNA+++ L EA +++ M E G+ P+ V+Y ++I C+ R
Sbjct: 334 ------EPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 388 EPGKAYEL 395
+ +A ++
Sbjct: 388 KTEEAKQV 395
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 217 RDLSP-DVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQR 275
+D P D ++N +++ +C + E A + EM + G+ D +Y +I
Sbjct: 259 KDKYPFDAKSFNIVLNGWCNVIGSPRE-AERVWMEMGNVGVKHDVVSYSSMISCYSKGGS 317
Query: 276 LSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFS 335
L++ LF M + + P+ + Y +++A S+A +L M + G
Sbjct: 318 LNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEE-------KGIE 370
Query: 336 PSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPG-KAYE 394
P+ VTYN++I LC + EEA V M E GL P +Y F RI G + +E
Sbjct: 371 PNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY----HAFMRILRTGEEVFE 426
Query: 395 L 395
L
Sbjct: 427 L 427
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 138/305 (45%), Gaps = 48/305 (15%)
Query: 160 YTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI-----RRLRLEDAVGVFRGM 214
+T LI ++ + P K +M++ F+P NR++ R L+ A +F+
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
+ P+ +YN L+ FC DL A+++ +M+ + ++PD D+Y+ LI+ C +
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCL--NDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFV--- 331
+++ A +L +ML G P+ +YT L+N+ + Q +A+ L M KG P V
Sbjct: 240 QVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYN 299
Query: 332 ------------------------TGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEI 367
G SP+ V+Y +I GLC G +E L M
Sbjct: 300 TMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISK 359
Query: 368 GLSPD-AVSYCTVILGFC---RIREPGKAYELKVEVDENMISWLGIWGLFEDTRKSLMQG 423
G SP +VS C ++ GFC ++ E E+ ++ E + S DT + ++
Sbjct: 360 GFSPHFSVSNC-LVKGFCSFGKVEEACDVVEVVMKNGETLHS---------DTWEMVIPL 409
Query: 424 LSNED 428
+ NED
Sbjct: 410 ICNED 414
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 113/248 (45%), Gaps = 22/248 (8%)
Query: 55 AFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMT 114
AFEL K+ GV N T +YN L+ A+C ++ + A + M
Sbjct: 174 AFELFKSSRLHGVMPN----------------TRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
ER + P++ S+ ++QG C KG++ M K PD +YT+L++ C K
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 175 KARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLI 230
+A K+L M G +P + YN +I R R DA V M SP+ V+Y TLI
Sbjct: 278 EAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
C D K + EM+ KG P L++ C ++ EA D+ +++ G
Sbjct: 338 GGLCDQGMFDEGKKY--LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Query: 291 VSPNNETY 298
+ +++T+
Sbjct: 396 ETLHSDTW 403
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 6/216 (2%)
Query: 103 VDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTS 162
+ +A + + G+ PN S+N ++Q C + M ++D+ PD +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 163 LIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRLEDAVGVFRGMTERD 218
LI FC KG A ++L +M++ GF P +Y N L R+ +L +A + M +
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 219 LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE 278
+PD+V YNT+I FC +E A ++ +M+ G P++ +Y LI LC Q E
Sbjct: 291 CNPDLVHYNTMILGFC--REDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
EM+ G SP+ L+ + G+ +A
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 15/307 (4%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCG-KGRMXXXXXXXXXM 148
+ L+ Y + ++ + M E P N ++ L +G +
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
+ P+ R+Y L+ FC A ++ +M++ P V +Y LI R+ ++
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
A+ + M + PD ++Y TL++ C+ + L +A+++ M KG PD Y
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCR--KTQLREAYKLLCRMKLKGCNPDLVHYN 299
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
+I C + R +A + +ML G SPN+ +Y L+ +G F + +EM K
Sbjct: 300 TMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISK 359
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
GF P F N ++ G C G+ EEA V+ + + G + + ++ VI C
Sbjct: 360 GFSPHFSVS--------NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Query: 385 RIREPGK 391
E K
Sbjct: 412 NEDESEK 418
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 13/178 (7%)
Query: 219 LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ-RLS 277
L+ ++ TY LI + + K P EK +M+ P ++ L + L
Sbjct: 117 LTGEIFTY--LIKVYAEAKLP--EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
+A++LF+ GV PN +Y LM A+ + S A+ L +M + +P +
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS----- 227
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
Y +I G C G+ A+ +L M G PD +SY T++ CR + +AY+L
Sbjct: 228 ---YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 37/205 (18%)
Query: 34 VIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAEQV 83
++I+GF G +V GA ELL KG + +S ++REA ++
Sbjct: 230 ILIQGFCRKG-------QVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 84 V---------DETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCG 134
+ + YN ++L +C ++R +A +L M G PN +S+ ++ GLC
Sbjct: 283 LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCD 342
Query: 135 KGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
+G M K +P L+ FC G +A V+ ++ +G + T
Sbjct: 343 QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDT 402
Query: 195 YNRLIR-----------RLRLEDAV 208
+ +I +L LEDAV
Sbjct: 403 WEMVIPLICNEDESEKIKLFLEDAV 427
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 6/217 (2%)
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGH 172
M E G P+++++N V+ G+ M + +PD TY L+H
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNT 228
P A +L+ M + G P V + LI R +LE + +PDVV Y
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
Query: 229 LISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
+I+ + + +LEKA EM EM KG LP+ TY +IR C+ + EA L +EM
Sbjct: 368 MITGY--ISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMES 425
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
G +PN Y+ L+N + G+ +A + +M KG
Sbjct: 426 RGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 18/254 (7%)
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN-RLIRRLRLEDAVGVFR- 212
P + +Y +++H V +M++ GF+P V TYN + RL ++R
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 213 --GMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTL 270
M + SPD+ TYN L+ +P A + M G+ P + LI L
Sbjct: 280 LDEMVKDGFSPDLYTYNILLHHLATGNKP--LAALNLLNHMREVGVEPGVIHFTTLIDGL 337
Query: 271 CLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGF 330
+L E ++ G +P+ YT ++ Y G+ KA + EMT KG LP
Sbjct: 338 SRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV 397
Query: 331 VTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPG 390
T YN++I G C+ G+ +EA +L+ M G +P+ V Y T++ ++ G
Sbjct: 398 FT--------YNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLV---NNLKNAG 446
Query: 391 KAYELKVEVDENMI 404
K E EV ++M+
Sbjct: 447 KVLEAH-EVVKDMV 459
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 111/254 (43%), Gaps = 14/254 (5%)
Query: 119 KPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARK 178
+P S+NA++ L G + M + PD TY ++ G + +
Sbjct: 219 RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYR 278
Query: 179 VLSEMIDSGFSPSVATYNRLIRRLRLED----AVGVFRGMTERDLSPDVVTYNTLISKFC 234
+L EM+ GFSP + TYN L+ L + A+ + M E + P V+ + TLI
Sbjct: 279 LLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLS 338
Query: 235 KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
+ + + K F E V G PD Y +I L +A ++F+EM G PN
Sbjct: 339 RAGKLEACKYF--MDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN 396
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRA 354
TY ++ + + G+F +A L EM +G P F V Y+ ++ L G+
Sbjct: 397 VFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNF--------VVYSTLVNNLKNAGKV 448
Query: 355 EEALGVLRGMPEIG 368
EA V++ M E G
Sbjct: 449 LEAHEVVKDMVEKG 462
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TYN ++ A + D +L M + G P+L ++N ++ L +
Sbjct: 256 DVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLL 315
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M + + P +T+LI G + + E + G +P V Y +I
Sbjct: 316 NHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISG 375
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFC---KLKEPDLEKAFEMKAEMVHKGILP 258
LE A +F+ MTE+ P+V TYN++I FC K KE A + EM +G P
Sbjct: 376 GELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKE-----ACALLKEMESRGCNP 430
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
+ Y L+ L ++ EA+++ ++M+ G
Sbjct: 431 NFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ Y ++ Y +++A + + MTE+G PN+ ++N++++G C G+
Sbjct: 361 DVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALL 420
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR 203
M + P+ Y++L++ + G +A +V+ +M++ G Y LI +L+
Sbjct: 421 KEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH------YVHLISKLK 472
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDA 207
M + ++ D Y +IH C G +A + + ++ SG P V TYN +IR L A
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRA 64
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
++ M R L PD +TYN++I C K+ L +A + + T+ LI
Sbjct: 65 EKLYAEMIRRGLVPDTITYNSMIHGLC--KQNKLAQA---------RKVSKSCSTFNTLI 113
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
C R+ + +LF EM R G+ N TYT L++ +R G F+ A + EM G
Sbjct: 114 NGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVY 173
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVL 361
S +T+ I+ LC +A+ +L
Sbjct: 174 --------SSSITFRDILPQLCSRKELRKAVAML 199
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
+RE+ +D T YN ++ C + DEA I + GL+P++ ++N +++ G
Sbjct: 5 MRESNMDMD-TAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLG 62
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
R M ++ L PD TY S+IH C + +ARKV S S +T+N
Sbjct: 63 R---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFN 110
Query: 197 RLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV 252
LI + R++D + +F M R + +V+TY TLI F ++ D A ++ EMV
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQV--GDFNTALDIFQEMV 168
Query: 253 HKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNET 297
G+ + T+ ++ LC ++ L +A + + + + NN T
Sbjct: 169 SNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ--KSSMVSNNVT 211
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 11/194 (5%)
Query: 109 ILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFC 168
+ + M E + + +N ++ GLC G+ + L PD +TY +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 169 DKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNT 228
G+A K+ +EMI G P TYN +I L ++ + R +S T+NT
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLA-----QARKVSKSCSTFNT 111
Query: 229 LISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
LI+ +C K ++ + EM +GI+ + TY LI + A D+F+EM+
Sbjct: 112 LINGYC--KATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
Query: 289 WGVSPNNETYTGLM 302
GV ++ T+ ++
Sbjct: 170 NGVYSSSITFRDIL 183
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 27/220 (12%)
Query: 183 MIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE 238
M +S A YN +I L + ++A +F + L PDV TYN +I +
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI------RF 58
Query: 239 PDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETY 298
L +A ++ AEM+ +G++PD TY +I LC Q +L++A VS + T+
Sbjct: 59 SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTF 109
Query: 299 TGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEAL 358
L+N Y KA ++D M F + G + +TY +I+G +G AL
Sbjct: 110 NTLINGY------CKATRVKDGMNL--FCEMYRRGIVANVITYTTLIHGFRQVGDFNTAL 161
Query: 359 GVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVE 398
+ + M G+ ++++ ++ C +E KA + ++
Sbjct: 162 DIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 23/193 (11%)
Query: 210 VFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRT 269
+F+ M E ++ D YN +I CK + D +A + ++ G+ PD TY +IR
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFD--EAGNIFTNLLISGLQPDVQTYNMMIRF 58
Query: 270 LCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG 329
L A L+ EM+R G+ P+ TY +++ + + ++A +
Sbjct: 59 ----SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV------------ 102
Query: 330 FVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREP 389
S S T+N +I G C R ++ + + M G+ + ++Y T+I GF ++ +
Sbjct: 103 -----SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDF 157
Query: 390 GKAYELKVEVDEN 402
A ++ E+ N
Sbjct: 158 NTALDIFQEMVSN 170
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 25/182 (13%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAF-ELLKAGTEKGVESNSVSGR--RIREAEQV------ 83
N+II G G + G F LL +G + V++ ++ R + AE++
Sbjct: 18 NIIIHGLCKAGKFD----EAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMIR 73
Query: 84 ---VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
V +T TYN+++ C ++ +A R + + +FN ++ G C R+
Sbjct: 74 RGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKD 124
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M ++ + + TYT+LIH F G A + EM+ +G S T+ ++
Sbjct: 125 GMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILP 184
Query: 201 RL 202
+L
Sbjct: 185 QL 186
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 115/234 (49%), Gaps = 7/234 (2%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTER-GLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
++NAL+ AY +++DEAM + + E+ G+ P+L+++N +++ LC KG M
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----R 203
+ + PD ++ +L+ F + + ++ M SP++ +YN +R L +
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
DA+ + M +SPDV TYN LI+ + + +LE+ + EM KG+ PD TY
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAY--RVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
LI LC + L A ++ E ++ + Y ++ G+ +A L
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 23/254 (9%)
Query: 36 IRGFTAVGNLQSESKKVGGAFELLKAGTEK-GVESNSVSGRRIREAEQVVDETTTYNALV 94
++ F A+ + SKK+ A + K EK G+ + V TYN ++
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV----------------TYNTMI 200
Query: 95 LAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLA 154
A C +D+ + I + + G +P+LISFN +++ + M K+L+
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR----LEDAVGV 210
P+ R+Y S + A ++ M G SP V TYN LI R LE+ +
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320
Query: 211 FRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTL 270
+ M E+ L+PD VTY LI C K+ DL++A E+ E + +L + Y+P++ L
Sbjct: 321 YNEMKEKGLTPDTVTYCMLIPLLC--KKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERL 378
Query: 271 CLQQRLSEAYDLFR 284
++ EA L +
Sbjct: 379 MGAGKIDEATQLVK 392
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 15/242 (6%)
Query: 163 LIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL----IRRLRLEDAVGVFRGMTER- 217
++ L+ G A K+ EM + +V ++N L + +L++A+ F+ + E+
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
++PD+VTYNT+I C+ + ++ + E+ G PD ++ L+ ++
Sbjct: 188 GITPDLVTYNTMIKALCR--KGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFV 245
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
E ++ M +SPN +Y + +F+ A +L D M G SP
Sbjct: 246 EGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMK--------TEGISPD 297
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKV 397
TYNA+I + EE + M E GL+PD V+YC +I C+ + +A E+
Sbjct: 298 VHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSE 357
Query: 398 EV 399
E
Sbjct: 358 EA 359
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 158 RTYTSLIHLFCDKGHPGKARKVLSEMIDS-GFSPSVATYNRLIRRL----RLEDAVGVFR 212
+++ +L+ + + +A K E+ + G +P + TYN +I+ L ++D + +F
Sbjct: 158 KSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFE 217
Query: 213 GMTERDLSPDVVTYNTLISKFCKLKEPDLE--KAFEMKAEMVHKGILPDADTYEPLIRTL 270
+ + PD++++NTL+ +F + +E +E + +++ M K + P+ +Y +R L
Sbjct: 218 ELEKNGFEPDLISFNTLLEEFYR-RELFVEGDRIWDL---MKSKNLSPNIRSYNSRVRGL 273
Query: 271 CLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGF 330
++ ++A +L M G+SP+ TY L+ AYR++ + +EM K
Sbjct: 274 TRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK------ 327
Query: 331 VTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
G +P VTY +I LC G + A+ V
Sbjct: 328 --GLTPDTVTYCMLIPLLCKKGDLDRAVEV 355
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 140/347 (40%), Gaps = 62/347 (17%)
Query: 75 RRIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISF 125
RR E QV DE + TY L+ Y +VDEA+G+ E G+ +L++F
Sbjct: 157 RRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAF 216
Query: 126 ----------------------------------NAVVQGLCGKGRMXXXXXXXXXMNQK 151
N ++ G C G + +
Sbjct: 217 HGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIAS 276
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDA 207
PD +Y ++I+ KG GKA ++ M D+ +P V N +I L R+ +A
Sbjct: 277 KCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEA 336
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG--ILPDADTYEP 265
+ VFR ++E+ P+VVTYN+L+ CK++ EK +E+ EM KG P+ T+
Sbjct: 337 LEVFREISEKGPDPNVVTYNSLLKHLCKIRRT--EKVWELVEEMELKGGSCSPNDVTFSY 394
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
L++ QR + + M + ++ Y + Y + K + EM
Sbjct: 395 LLK---YSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMER-- 449
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
+G P TY I+GL G+ EAL + M G+ P+
Sbjct: 450 ------SGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 15/227 (6%)
Query: 178 KVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
+V EM + TY L+ R ++++AVGVF E + D+V ++ L+
Sbjct: 164 QVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWL 223
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
C+ K + + + D ++ C+ + EA +++++ P
Sbjct: 224 CRYKHVEFAETLFCSRR---REFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRP 280
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
+ +Y ++NA +G+ KA L M + T +P N +I LC R
Sbjct: 281 DVVSYGTMINALTKKGKLGKAMELYRAM--------WDTRRNPDVKICNNVIDALCFKKR 332
Query: 354 AEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVD 400
EAL V R + E G P+ V+Y +++ C+IR K +EL E++
Sbjct: 333 IPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 5/215 (2%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ +Y ++ A ++ +AM + R M + P++ N V+ LC K R+
Sbjct: 281 DVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVF 340
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG--FSPSVATYNRLIR-RL 202
+++K P+ TY SL+ C K +++ EM G SP+ T++ L++
Sbjct: 341 REISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQ 400
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
R +D V M + YN + + + + EK E+ +EM G+ PD T
Sbjct: 401 RSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKE--EKVREIWSEMERSGLGPDQRT 458
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNET 297
Y I L + ++ EA F+EM+ G+ P T
Sbjct: 459 YTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 52/322 (16%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T+ + Y +V EA+G M E G K FN ++ L + M
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRL 204
+K PD ++YT L+ + + + + +V EM D GF P V Y +I + +
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 205 EDAVGVFRGMTERDLSP-----------------------------------DVVTYNTL 229
E+A+ F M +R+ P + TYN L
Sbjct: 284 EEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNAL 343
Query: 230 ISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW 289
+ +C + +E A++ EM KG+ P+A TY+ ++ L QR EAY++++ M
Sbjct: 344 VGAYCWSQR--MEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM--- 398
Query: 290 GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLC 349
P TY ++ + + + A + DEM KG LPG H+ ++++I LC
Sbjct: 399 SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGM-------HM-FSSLITALC 450
Query: 350 LLGRAEEALGVLRGMPEIGLSP 371
+ +EA M ++G+ P
Sbjct: 451 HENKLDEACEYFNEMLDVGIRP 472
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 9/240 (3%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ Y ++ A+C ++ +EA+ M +R KP+ F +++ GL + ++
Sbjct: 266 DVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF 325
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN----RLIRR 201
+ TY +L+ +C A K + EM G P+ TY+ LIR
Sbjct: 326 ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRM 385
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
R ++A V++ M+ P V TY ++ FC + D+ A ++ EM KG+LP
Sbjct: 386 QRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNKERLDM--AIKIWDEMKGKGVLPGMH 440
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+ LI LC + +L EA + F EML G+ P ++ L EG+ K L +M
Sbjct: 441 MFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 15/286 (5%)
Query: 114 TERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHP 173
++G K ++NA+++ L + M K L E T+ + +
Sbjct: 120 NQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKV 178
Query: 174 GKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTL 229
+A +M + GF + +NR++ L + DA VF M ++ PD+ +Y L
Sbjct: 179 KEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTIL 238
Query: 230 ISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW 289
+ + + E +L + E+ EM +G PD Y +I C ++ EA F EM +
Sbjct: 239 LEGWGQ--ELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQR 296
Query: 290 GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLC 349
P+ + L+N E + + A F +GF TYNA++ C
Sbjct: 297 NCKPSPHIFCSLINGLGSEKKLNDALEF--------FERSKSSGFPLEAPTYNALVGAYC 348
Query: 350 LLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
R E+A + M G+ P+A +Y ++ R++ +AYE+
Sbjct: 349 WSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEV 394
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 44/286 (15%)
Query: 120 PNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD---LAPDERTYTSLIHLFCDKGHPGKA 176
P+ + +++G GR+ M ++D PDE TYT+++ F + G +A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 177 RKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL 236
R+VL+EM G NR +TYN L+ +CK
Sbjct: 472 RQVLAEMARMGVPA-----NR--------------------------ITYNVLLKGYCK- 499
Query: 237 KEPDLEKAFEMKAEMVHK-GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
+ +++A ++ EM GI PD +Y +I L + A F EM G++P
Sbjct: 500 -QLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTK 558
Query: 296 ETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAE 355
+YT LM A+ + GQ A + DEM + P + +N ++ G C LG E
Sbjct: 559 ISYTTLMKAFAMSGQPKLANRVFDEMMND---PRVKVDL----IAWNMLVEGYCRLGLIE 611
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
+A V+ M E G P+ +Y ++ G + R+PG A L E+ E
Sbjct: 612 DAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKE 657
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTE-RGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
TYN L+ YC ++D A +LR MTE G++P+++S+N ++ G
Sbjct: 489 TYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNE 548
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI-DSGFSPSVATYNRLIR---RLR 203
M + +AP + +YT+L+ F G P A +V EM+ D + +N L+ RL
Sbjct: 549 MRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLG 608
Query: 204 L-EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP 239
L EDA V M E P+V TY +L + + ++P
Sbjct: 609 LIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKP 645
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 13/249 (5%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCM---TERGLKPNLISFNAVVQGLCGKGRMXXXX 142
++ Y L+ Y + RV + +L M +R P+ +++ VV G M
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI-DSGFSPSVATYNRLIRR 201
M + + + TY L+ +C + +A +L EM D+G P V +YN +I
Sbjct: 473 QVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Query: 202 LRLED----AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL-EKAFEMKAEMVHKG- 255
L D A+ F M R ++P ++Y TL+ F +P L + F+ EM++
Sbjct: 533 CILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFD---EMMNDPR 589
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
+ D + L+ C + +A + M G PN TY L N + A
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
Query: 316 HLQDEMTHK 324
L E+ +
Sbjct: 650 LLWKEIKER 658
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 152/421 (36%), Gaps = 89/421 (21%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK-GRMXXXXXX 144
+T +NA++ A D+ + M+E +P+++++N +++ LC + GR
Sbjct: 235 DTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIK-LCARVGRKELIVFV 293
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMID------------------- 185
+ K + T SL+ + G A +++ M +
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353
Query: 186 ------------------SGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSP------ 221
SG+S + E V VF+ + + P
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGYSAR--------DEVSEEGVVDVFKKLLPNSVDPSGEPPL 405
Query: 222 -------DVVTYNTLISKFCKL-KEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQ 273
D Y TL+ + K + D + E + PD TY ++
Sbjct: 406 LPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNA 465
Query: 274 QRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTG 333
+ A + EM R GV N TY L+ Y + Q +A L EMT G
Sbjct: 466 GLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDA-------G 518
Query: 334 FSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAY 393
P V+YN II G L+ + AL M G++P +SY T++ F +P A
Sbjct: 519 IEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLAN 578
Query: 394 EL--------KVEVDENMISWLGI------WGLFEDTRKSLMQG-----LSNEDTFSSLM 434
+ +V+VD +I+W + GL ED ++ + + N T+ SL
Sbjct: 579 RVFDEMMNDPRVKVD--LIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLA 636
Query: 435 N 435
N
Sbjct: 637 N 637
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 118/310 (38%), Gaps = 56/310 (18%)
Query: 119 KPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARK 178
+P+ +FNAV+ G M++ D PD TY +I L G
Sbjct: 233 RPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVF 292
Query: 179 VLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTE--RDL------------- 219
VL +ID G + T + L+ L A + + M E RDL
Sbjct: 293 VLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLK 352
Query: 220 -----------------------SPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
+ D V+ ++ F KL ++ + E ++ K
Sbjct: 353 EKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGE--PPLLPKVF 410
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW---GVSPNNETYTGLMNAYRIEGQFSK 313
PD+ Y L++ R+++ + M R P+ TYT +++A+ G +
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 314 AFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPE-IGLSPD 372
A + EM G +P + +TYN ++ G C + + A +LR M E G+ PD
Sbjct: 471 ARQVLAEMARMG-VPA-------NRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPD 522
Query: 373 AVSYCTVILG 382
VSY +I G
Sbjct: 523 VVSYNIIIDG 532
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 141/342 (41%), Gaps = 53/342 (15%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+T T+N ++ + EA +L+ M E+G+ P+ ++N ++ G +
Sbjct: 339 DTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYY 398
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM------IDSGFSPS-------- 191
+ + L PD T+ +++H+ C + + V++EM ID P
Sbjct: 399 RKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNE 458
Query: 192 --VATYNRLIRRLRLE----------------------DAVGVFRGMTERDLS---PDVV 224
V L R +L+ +A VF G +R++S DV+
Sbjct: 459 GLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYG--KRNMSGQRNDVL 516
Query: 225 TYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFR 284
YN +I + K K EKA + M ++G PD TY L + L + EA +
Sbjct: 517 EYNVMIKAYGKAKLH--EKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 285 EMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAI 344
EML G P +TY ++ +Y G S A L + M TG P+ V Y ++
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEK--------TGVKPNEVVYGSL 626
Query: 345 IYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
I G G EEA+ R M E G+ + + ++I + ++
Sbjct: 627 INGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKV 668
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 144/346 (41%), Gaps = 52/346 (15%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
E + + +T TYN L+ + ++ A+ R + + GL P+ ++ AV+ LC + +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKV--------------LSEMI 184
M++ + DE + ++ ++ ++G +A+ + L+ +I
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 185 D---------------------SGFSPSVATYNRLIR---RLRL-EDAVGVFRGMTERDL 219
D SG V YN +I+ + +L E A+ +F+GM +
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 220 SPDVVTYNTLISKFCKLKEPDL-EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE 278
PD TYN+L F L DL ++A + AEM+ G P TY +I + LS+
Sbjct: 547 WPDECTYNSL---FQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSH 338
A DL+ M + GV PN Y L+N + G +A M G +H
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEH--------GVQSNH 655
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
+ ++I +G EEA V M + PD V+ +L C
Sbjct: 656 IVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD-VAASNSMLSLC 700
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 136/330 (41%), Gaps = 49/330 (14%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TY A++ +Y + +A+ + M + G+KPN + + +++ G G + M
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR----L 204
+ + + TSLI + G +AR+V +M DS P VA N ++ +
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+A +F + E+ + DV+++ T++ + + L++A E+ EM G+L D ++
Sbjct: 707 SEAESIFNALREKG-TCDVISFATMMYLYKGMGM--LDEAIEVAEEMRESGLLSDCTSFN 763
Query: 265 PLIRTLCLQQRLSEAYDLFREM-------LRWGVSPN-----------NETYTGLMNAYR 306
++ +LSE +LF EM L WG +E + L AY
Sbjct: 764 QVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYN 823
Query: 307 ----------------IEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCL 350
G ++ A E+T G +P H YNA+IY
Sbjct: 824 EAKPLATPAITATLFSAMGLYAYALESCQELT-SGEIP-------REHFAYNAVIYTYSA 875
Query: 351 LGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
G + AL M E GL PD V+ ++
Sbjct: 876 SGDIDMALKAYMRMQEKGLEPDIVTQAYLV 905
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 120/307 (39%), Gaps = 30/307 (9%)
Query: 120 PNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKV 179
PN+I +N V++ L G+ M + P TY L+ ++ G +A
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 180 LSEMIDSGFSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDVVTYNTLISKFCK 235
+ M P T ++R + + A F+G + D+ + +
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSA 262
Query: 236 LKEPDLEKAFEMK----------AEMVHKGILPDAD--------TYEPLIRTLCLQQRLS 277
+L++ M+ + +H D+ T+ LI RL+
Sbjct: 263 QSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLN 322
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
+A +LF EML+ GV + T+ +++ G S+A L +M KG SP
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGI--------SPD 374
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKV 397
TYN ++ G E AL R + ++GL PD V++ V+ C+ + + +
Sbjct: 375 TKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIA 434
Query: 398 EVDENMI 404
E+D N I
Sbjct: 435 EMDRNSI 441
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 150/347 (43%), Gaps = 21/347 (6%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTER-GLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+ + + AYC ++D A+ M KPN+ +N VV G G M M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
++ PD T+ LI+ +C A + EM + G P+V ++N LIR ++
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
E+ V + M E T L+ C +E ++ A + ++++K +LP Y
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLC--REGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
L+ LC + + A ++ E+ + G +P T L+ R G+ KA ++M +
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G L P VT+N ++ LC + +A + G PD +Y ++ GF
Sbjct: 398 GIL--------PDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFT 449
Query: 385 RIREPGKAYELKVEVDENMISWLGIWGLFEDTRKSLMQGLSNEDTFS 431
+ G+ E +V V+E M+ + +F T LM GLS FS
Sbjct: 450 K---EGRRKEGEVLVNE-MLDKDMLPDIF--TYNRLMDGLSCTGKFS 490
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 14/277 (5%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
E+ + T+N L+ YC + D A+ + R M E+G +PN++SFN +++G G++
Sbjct: 222 ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEE 281
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M + E T L+ C +G A ++ ++++ PS Y L+
Sbjct: 282 GVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVE 341
Query: 201 RLRLED----AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
+L E+ A+ + + ++ +P + TL+ K EKA +M++ GI
Sbjct: 342 KLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGL--RKSGRTEKASGFMEKMMNAGI 399
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
LPD+ T+ L+R LC ++A L G P+ TY L++ + EG+ +
Sbjct: 400 LPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEV 459
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
L +EM K LP TYN ++ GL G+
Sbjct: 460 LVNEMLDKDMLPDI--------FTYNRLMDGLSCTGK 488
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 132/301 (43%), Gaps = 19/301 (6%)
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDE--RT 159
+++ A IL M E+G+ + F +++ G + M KDL + ++
Sbjct: 165 KLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM--KDLGVERTIKS 222
Query: 160 YTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----RLRLEDAVGVFRGMT 215
Y SL + +G A++ ++M+ G P+ TYN ++ LRLE A+ F M
Sbjct: 223 YNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMK 282
Query: 216 ERDLSPDVVTYNTLISKFCKLKEPD-LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
R +SPD T+NT+I+ FC+ K+ D EK F EM I P +Y +I+
Sbjct: 283 TRGISPDDATFNTMINGFCRFKKMDEAEKLF---VEMKGNKIGPSVVSYTTMIKGYLAVD 339
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
R+ + +F EM G+ PN TY+ L+ G+ +A ++ M K P
Sbjct: 340 RVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP------ 393
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
+ + ++ G A VL+ M + + +A Y +I C+ +A +
Sbjct: 394 -KDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIK 452
Query: 395 L 395
L
Sbjct: 453 L 453
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 129/315 (40%), Gaps = 14/315 (4%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+YN+L R A M G++P ++N ++ G R+ M
Sbjct: 222 SYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDM 281
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
+ ++PD+ T+ ++I+ FC +A K+ EM + PSV +Y +I+ R+
Sbjct: 282 KTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRV 341
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK---AEMVHKGILP-DA 260
+D + +F M + P+ TY+TL+ C D K E K M+ K I P D
Sbjct: 342 DDGLRIFEEMRSSGIEPNATTYSTLLPGLC-----DAGKMVEAKNILKNMMAKHIAPKDN 396
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
+ L+ + ++ A ++ + M V Y L+ +++A L D
Sbjct: 397 SIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDT 456
Query: 321 MTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
+ K + YN II LC G+ +A + R + + G+ D + +I
Sbjct: 457 LIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLI 515
Query: 381 LGFCRIREPGKAYEL 395
G + P +YE+
Sbjct: 516 RGHAKEGNPDSSYEI 530
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 127/338 (37%), Gaps = 55/338 (16%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN ++ + R++ A+ M RG+ P+ +FN ++ G C +M M
Sbjct: 257 TYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM 316
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
+ P +YT++I + ++ EM SG P+ TY+ L+ L ++
Sbjct: 317 KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKM 376
Query: 205 EDAVGVFRGMTERDLSP------------------------------------DVVTYNT 228
+A + + M + ++P + Y
Sbjct: 377 VEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGV 436
Query: 229 LISKFCKLKEPD-----LEKAFEMKAEMVHKGILP-DADTYEPLIRTLCLQQRLSEAYDL 282
LI CK + L+ E + + H+ L + Y P+I LC + ++A L
Sbjct: 437 LIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVL 496
Query: 283 FREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYN 342
FR++++ GV + + L+ + EG ++ + M+ + G Y
Sbjct: 497 FRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRR--------GVPRESNAYE 547
Query: 343 AIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
+I G +A L M E G PD+ + +VI
Sbjct: 548 LLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVI 585
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 111/278 (39%), Gaps = 29/278 (10%)
Query: 75 RRIREAEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISF 125
+++ EAE++ E +Y ++ Y +RVD+ + I M G++PN ++
Sbjct: 304 KKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTY 363
Query: 126 NAVVQGLCGKGRMXXXXXXXXXMNQKDLAP-DERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+ ++ GLC G+M M K +AP D + L+ G A +VL M
Sbjct: 364 STLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMA 423
Query: 185 DSGFSPSVATYNRLI----------RRLRLEDAV----GVFRGMTERDLSPDVVTYNTLI 230
Y LI R ++L D + + R ++ P YN +I
Sbjct: 424 TLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSA--YNPII 481
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
C KA + +++ +G+ D D LIR + +Y++ + M R G
Sbjct: 482 EYLC--NNGQTAKAEVLFRQLMKRGV-QDQDALNNLIRGHAKEGNPDSSYEILKIMSRRG 538
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
V + Y L+ +Y +G+ A D M G +P
Sbjct: 539 VPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVP 576
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 14/197 (7%)
Query: 194 TYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKA 249
T+ ++I+ L +L A + M E+ + D + LI + K ++++ ++
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGK--AGIVQESVKIFQ 209
Query: 250 EMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEG 309
+M G+ +Y L + + + R A F +M+ GV P TY ++ + +
Sbjct: 210 KMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSL 269
Query: 310 QFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGL 369
+ A ++M + G SP T+N +I G C + +EA + M +
Sbjct: 270 RLETALRFFEDMKTR--------GISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKI 321
Query: 370 SPDAVSYCTVILGFCRI 386
P VSY T+I G+ +
Sbjct: 322 GPSVVSYTTMIKGYLAV 338
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 19/237 (8%)
Query: 160 YTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI-----RRLRLEDAVGVFRGM 214
+T LI ++ + P K +M++ F+P NR++ R L+ A +F+
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
+ P+ +YN L+ FC DL A+++ +M+ + ++PD D+Y+ LI+ C +
Sbjct: 182 RLHGVMPNTRSYNLLMQAFC--LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
+++ A +L +ML G P+ GL + +G F + +EM KGF P F
Sbjct: 240 QVNGAMELLDDMLNKGFVPDRTLIGGLCD----QGMFDEGKKYLEEMISKGFSPHFSVS- 294
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGK 391
N ++ G C G+ EEA V+ + + G + + ++ VI C E K
Sbjct: 295 -------NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 24/195 (12%)
Query: 55 AFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMT 114
AFEL K+ GV N T +YN L+ A+C ++ + A + M
Sbjct: 174 AFELFKSSRLHGVMPN----------------TRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
ER + P++ S+ ++QG C KG++ M K PD +LI CD+G
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFD 273
Query: 175 KARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLI 230
+ +K L EMI GFSP + N L++ ++E+A V + + + T+ +I
Sbjct: 274 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 333
Query: 231 SKFCKLKEPDLEKAF 245
C E + K F
Sbjct: 334 PLICNEDESEKIKLF 348
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 3/183 (1%)
Query: 103 VDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTS 162
+ +A + + G+ PN S+N ++Q C + M ++D+ PD +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 163 LIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPD 222
LI FC KG A ++L +M++ GF P L + ++ M + SP
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 290
Query: 223 VVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDL 282
N L+ FC + +E+A ++ ++ G +DT+E +I +C + SE L
Sbjct: 291 FSVSNCLVKGFCSFGK--VEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE-SEKIKL 347
Query: 283 FRE 285
F E
Sbjct: 348 FLE 350
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 115/268 (42%), Gaps = 33/268 (12%)
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNR----LIRRLRLEDAVGVFRGM 214
TY+S I F + KA ++ + D +V N L++ +L+ + +F M
Sbjct: 134 TYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQM 192
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
L PDVVTYNTL++ K+K KA E+ E+ H GI D+ Y ++
Sbjct: 193 KRDGLKPDVVTYNTLLAGCIKVKN-GYPKAIELIGELPHNGIQMDSVMYGTVLAICASNG 251
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFV--- 331
R EA + ++M G SPN Y+ L+N+Y +G + KA L EM G +P V
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 332 ------------------------TGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEI 367
G++ + + Y ++ GL G+ EEA + M
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 368 GLSPDAVSYCTVILGFCRIREPGKAYEL 395
G+ D + +I CR + +A EL
Sbjct: 372 GVRSDGYANSIMISALCRSKRFKEAKEL 399
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 162/394 (41%), Gaps = 44/394 (11%)
Query: 18 LLRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRI 77
L RL+T L+ + NVI+R F G Q + FE ++ + V
Sbjct: 89 LQRLATVLK--VQDLNVILRDFGISGRWQD----LIQLFEWMQQHGKISV---------- 132
Query: 78 REAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGR 137
+TY++ + + + V +A+ I + + + K N+ N+++ L G+
Sbjct: 133 ----------STYSSCI-KFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGK 181
Query: 138 MXXXXXXXXXMNQKDLAPDERTYTSLIH--LFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
+ M + L PD TY +L+ + G+P KA +++ E+ +G Y
Sbjct: 182 LDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYP-KAIELIGELPHNGIQMDSVMY 240
Query: 196 NRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM 251
++ R E+A + M SP++ Y++L++ + + D +KA E+ EM
Sbjct: 241 GTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYS--WKGDYKKADELMTEM 298
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
G++P+ L++ + +L E+ G + N Y LM+ G+
Sbjct: 299 KSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKL 358
Query: 312 SKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
+A + D+M KG G++ S +I LC R +EA + R
Sbjct: 359 EEARSIFDDMKGKGVRSD---GYANS-----IMISALCRSKRFKEAKELSRDSETTYEKC 410
Query: 372 DAVSYCTVILGFCRIREPGKAYELKVEVDENMIS 405
D V T++ +CR E + ++DE +S
Sbjct: 411 DLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVS 444
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 7/237 (2%)
Query: 94 VLAYCCDE-RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
VLA C R +EA ++ M G PN+ +++++ KG M
Sbjct: 243 VLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIG 302
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAV 208
L P++ T+L+ ++ G ++R++LSE+ +G++ + Y L+ L +LE+A
Sbjct: 303 LVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEAR 362
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIR 268
+F M + + D + +IS C+ K K +E ++ D ++
Sbjct: 363 SIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKC--DLVMLNTMLC 420
Query: 269 TLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
C + + ++M VSP+ T+ L+ + E A+ +M KG
Sbjct: 421 AYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 134/324 (41%), Gaps = 32/324 (9%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YN ++ A + D A+ + E GL +F +V+GLC GR+ M
Sbjct: 231 YNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMR 290
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
+ PD YT++I +G+ + +V EM P V Y L+ L R+E
Sbjct: 291 ENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVE 350
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+F M + + D Y LI F + + + A + ++V G + D Y
Sbjct: 351 RGYELFMEMKGKQILIDREIYRVLIEGF--VADGKVRSACNLWEDLVDSGYIADIGIYNA 408
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+I+ LC ++ +AY LF+ + + P+ ET + +M AY + + S ++ + + G
Sbjct: 409 VIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELG 468
Query: 326 F-LPGFVTGF-------------------------SPSHVTYNAIIYGLCLLGRAEEALG 359
+ + ++T F S YN ++ L +G +++L
Sbjct: 469 YPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLS 528
Query: 360 VLRGMPEIGLSPDAVSYCTVILGF 383
+ M ++G PD+ SY I F
Sbjct: 529 LFYEMRKLGFEPDSSSYSIAICCF 552
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 119/308 (38%), Gaps = 49/308 (15%)
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
++G K + ++NA L G M+ + P E+ + LI + D
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 175 KARKVLSEMIDSGFSPSVATYNRLIRRL-------------------------------- 202
+ V +M GF P V YNR++ L
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 203 -------RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
R+E+ + + + M E PDV Y +I + E +L+ + + EM
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTL--VSEGNLDASLRVWDEMRRDE 328
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF 315
I PD Y L+ LC R+ Y+LF EM + + E Y L+ + +G+ A
Sbjct: 329 IKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSAC 388
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVS 375
+L +++ G++ YNA+I GLC + + ++A + + E L PD +
Sbjct: 389 NLWEDLVDSGYIADI--------GIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFET 440
Query: 376 YCTVILGF 383
+++ +
Sbjct: 441 LSPIMVAY 448
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 122/313 (38%), Gaps = 18/313 (5%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM 138
+ +Q++ + Y L+ + D +V A + + + G ++ +NAV++GLC ++
Sbjct: 360 KGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQV 419
Query: 139 XXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
+++L PD T + ++ + VL + + G+ V+ Y
Sbjct: 420 DKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGY--PVSDYLTQ 477
Query: 199 IRRLRLED------AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV 252
+L D A+ VF + + V YN L+ K+ D++K+ + EM
Sbjct: 478 FFKLLCADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMG--DIQKSLSLFYEMR 534
Query: 253 HKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFS 312
G PD+ +Y I + + A +++ P+ Y L G+
Sbjct: 535 KLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEID 594
Query: 313 KAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
L E L +G P Y + +C AE+ + V+ M + G+ +
Sbjct: 595 AVMLLVREC-----LGNVESG--PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFIN 647
Query: 373 AVSYCTVILGFCR 385
V YC +I G +
Sbjct: 648 EVIYCAIISGMSK 660
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 115/314 (36%), Gaps = 54/314 (17%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
+++ + Y LV+ C D RV ERG +
Sbjct: 327 DEIKPDVMAYGTLVVGLCKDGRV-----------ERGYE--------------------- 354
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M K + D Y LI F G A + +++DSG+ + YN +I+
Sbjct: 355 ---LFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIK 411
Query: 201 RL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE-PDLEKAFEMKAEMVHKG 255
L +++ A +F+ E +L PD T + ++ + + D E E+ +
Sbjct: 412 GLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGY-- 469
Query: 256 ILPDADTYEPLIRTLCL-QQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
P +D + LC +++ + A D+F +L+ + Y LM A G K+
Sbjct: 470 --PVSDYLTQFFKLLCADEEKNAMALDVFY-ILKTKGHGSVSVYNILMEALYKMGDIQKS 526
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
L EM GF P +Y+ I G + A + E+ P
Sbjct: 527 LSLFYEMRK--------LGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIA 578
Query: 375 SYCTVILGFCRIRE 388
+Y ++ G C+I E
Sbjct: 579 AYLSLTKGLCQIGE 592
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 140/309 (45%), Gaps = 16/309 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T ++ C + R+ E + +L + + P++I ++V + + R+ +
Sbjct: 236 TIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRL 295
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----RLRL 204
K++ D Y+ +++ +G ARKV EM+ GFS + Y +R + +
Sbjct: 296 LMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDV 355
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
++A + M E +SP T+N LI F + EK E MV +G++P +
Sbjct: 356 KEAERLLSEMEESGVSPYDETFNCLIGGFARFGWE--EKGLEYCEVMVTRGLMPSCSAFN 413
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQ-FSKAFHLQDEMTH 323
+++++ + ++ A ++ + + G P+ TY+ L+ + IEG +A L EM +
Sbjct: 414 EMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGF-IEGNDIDQALKLFYEMEY 472
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
+ PGF + ++I GLC G+ E L+ M + + P+A Y +I F
Sbjct: 473 RKMSPGF--------EVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAF 524
Query: 384 CRIREPGKA 392
+I + A
Sbjct: 525 QKIGDKTNA 533
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 14/259 (5%)
Query: 151 KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR----LRLED 206
K + P+E T +I + C +G + +L + PSV L+ R +R+E+
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
++ + + + +++ D + Y+ ++ + K KE DL A ++ EM+ +G ++ Y
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVV--YAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVF 345
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
+R C + + EA L EM GVSP +ET+ L+ + G K + M +G
Sbjct: 346 VRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGL 405
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
+ PS +N ++ + + A +L + G PD +Y +I GF
Sbjct: 406 M--------PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEG 457
Query: 387 REPGKAYELKVEVDENMIS 405
+ +A +L E++ +S
Sbjct: 458 NDIDQALKLFYEMEYRKMS 476
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 113/251 (45%), Gaps = 7/251 (2%)
Query: 75 RRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCG 134
+R+ VVD T Y+ +V A + + A + M +RG N + V+ C
Sbjct: 293 KRLLMKNMVVD-TIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCE 351
Query: 135 KGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
KG + M + ++P + T+ LI F G K + M+ G PS +
Sbjct: 352 KGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSA 411
Query: 195 YNRLIRRL-RLED---AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAE 250
+N +++ + ++E+ A + ++ PD TY+ LI F ++ D+++A ++ E
Sbjct: 412 FNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGF--IEGNDIDQALKLFYE 469
Query: 251 MVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQ 310
M ++ + P + + LI LC ++ + M + + PN + Y L+ A++ G
Sbjct: 470 MEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGD 529
Query: 311 FSKAFHLQDEM 321
+ A + +EM
Sbjct: 530 KTNADRVYNEM 540
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 15/216 (6%)
Query: 65 KGVESNSVSGRRIREAEQVVDETTTYNALV----LAYCCDE-RVDEAMGILRCMTERGLK 119
K E + VS R++ ++++ + N+ V + CC++ V EA +L M E G+
Sbjct: 314 KAKEGDLVSARKV--FDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVS 371
Query: 120 PNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKV 179
P +FN ++ G G M + L P + ++ + +A ++
Sbjct: 372 PYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEI 431
Query: 180 LSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK 235
L++ ID GF P TY+ LIR ++ A+ +F M R +SP + +LI C
Sbjct: 432 LTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCT 491
Query: 236 LKEPDL-EKAFEMKAEMVHKGILPDADTYEPLIRTL 270
+ + EK ++ M + I P+AD Y+ LI+
Sbjct: 492 CGKVEAGEKYLKI---MKKRLIEPNADIYDALIKAF 524
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 155/393 (39%), Gaps = 74/393 (18%)
Query: 84 VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX 143
V + TY +V C D A I+ M E GL+P + +++++ L +GR+
Sbjct: 544 VPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEE 603
Query: 144 XXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL- 202
M + + PDE Y +I+ + G +A +++ E++ PS TY LI
Sbjct: 604 TFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFV 663
Query: 203 ---RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+E M E LSP+VV Y LI F LK+ D + +F + M I D
Sbjct: 664 KMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHF--LKKGDFKFSFTLFGLMGENDIKHD 721
Query: 260 ADTYEPLIRTLC-------------------LQQRL-------------------SEAYD 281
Y L+ L L QRL S A +
Sbjct: 722 HIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAME 781
Query: 282 LFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFV---------- 331
+ + ++ + PN + ++ Y G+ +A++ + M +G +P V
Sbjct: 782 VIGK-VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHI 840
Query: 332 --------------TGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
T P V Y+ ++ GLC R +AL ++ M + G++P+ SY
Sbjct: 841 EAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYE 900
Query: 378 TVILGFCRIREPGKAYELKVEVDENMISWLGIW 410
++ C R +A V+V ++M + L IW
Sbjct: 901 KLLQCLCYSRLTMEA----VKVVKDMAA-LDIW 928
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 14/257 (5%)
Query: 96 AYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAP 155
A C A+ + M G P S+N+V++ L + + + + D P
Sbjct: 486 ALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVP 545
Query: 156 DERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVF 211
D TY +++ C K A ++ M + G P+VA Y+ +I L R+ +A F
Sbjct: 546 DVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETF 605
Query: 212 RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLC 271
M E + PD + Y +I+ + + +++A E+ E+V + P + TY LI
Sbjct: 606 AKMLESGIQPDEIAYMIMINTYA--RNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFV 663
Query: 272 LQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFV 331
+ + +ML G+SPN YT L+ + +G F +F L M
Sbjct: 664 KMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGE-------- 715
Query: 332 TGFSPSHVTYNAIIYGL 348
H+ Y ++ GL
Sbjct: 716 NDIKHDHIAYITLLSGL 732
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
+ ++ +N ++ YC R+DEA L M + G+ PNL+++ +++ G +
Sbjct: 788 KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIES 847
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
N + PD+ Y++L+ CD P A ++ EM SG +P+ +Y +L++
Sbjct: 848 AIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQ 904
Query: 201 -----RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
RL +E AV V + M D+ P + + LI C +E L +A + A MV G
Sbjct: 905 CLCYSRLTME-AVKVVKDMAALDIWPRSINHTWLIYILC--EEKKLREARALFAIMVQSG 961
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 36/212 (16%)
Query: 114 TERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHP 173
++ + PNL N ++ G C GR+ M ++ + P+ TYT L+ K H
Sbjct: 786 VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILM-----KSH- 839
Query: 174 GKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
I++G +E A+ +F G + PD V Y+TL+
Sbjct: 840 ----------IEAG---------------DIESAIDLFEG---TNCEPDQVMYSTLLKGL 871
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
C K P A + EM GI P+ D+YE L++ LC + EA + ++M + P
Sbjct: 872 CDFKRP--LDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWP 929
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+ +T L+ E + +A L M G
Sbjct: 930 RSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 146/354 (41%), Gaps = 43/354 (12%)
Query: 76 RIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
RI EA ++V+E TY L+ + +++ L M E GL PN++ +
Sbjct: 632 RIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT 691
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
A++ KG M + D+ D Y +L+ K R+V+ E
Sbjct: 692 ALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVE---- 747
Query: 187 GFSPSVATYNRLIRR---LRLEDAVGVFR---------GMTERDLSPDVVTYNTLISKFC 234
RLIR + + ++G + G ++ + P++ +NT+I+ +C
Sbjct: 748 --PGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYC 805
Query: 235 KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
L++A+ M +GI+P+ TY L+++ + A DLF P+
Sbjct: 806 AAGR--LDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGT---NCEPD 860
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRA 354
Y+ L+ + A L EM +G +P+ +Y ++ LC
Sbjct: 861 QVMYSTLLKGLCDFKRPLDALALMLEMQK--------SGINPNKDSYEKLLQCLCYSRLT 912
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFC---RIREPGKAYELKVEVDENMIS 405
EA+ V++ M + + P ++++ +I C ++RE + + V+ ++++
Sbjct: 913 MEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLN 966
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 129/321 (40%), Gaps = 35/321 (10%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+YN+++ + +++ ++ + E P++ ++ VV LC K M
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
+ L P Y+S+I +G +A + ++M++SG P Y N R R+
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
++A + + + L P TY LIS F K+ +EK + +M+ G+ P+ Y
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGFVKMGM--MEKGCQYLDKMLEDGLSPNVVLYT 691
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY----------RIEGQFSKA 314
LI + ++ LF M + ++ Y L++ ++ + K
Sbjct: 692 ALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKE 751
Query: 315 FHLQDEMTHKGF--LPGFVTGFS-----------------PSHVTYNAIIYGLCLLGRAE 355
LQ + K +P + + P+ +N II G C GR +
Sbjct: 752 KLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLD 811
Query: 356 EALGVLRGMPEIGLSPDAVSY 376
EA L M + G+ P+ V+Y
Sbjct: 812 EAYNHLESMQKEGIVPNLVTY 832
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 149/382 (39%), Gaps = 33/382 (8%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
Y +L +C EA + M G + + + +++ C M M
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLE 205
++ D + +LIH F G K R + S+MI G +V TY+ +I + ++
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 206 DAVGVFRGMT-ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
A+ +F T D+S +V Y LI F K+ ++KA ++ M+ GI+PD TY
Sbjct: 360 YALRLFVNNTGSEDISRNVHCYTNLIFGF--YKKGGMDKAVDLLMRMLDNGIVPDHITYF 417
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNA-YRIEGQFSKAFHLQDEMTH 323
L++ L L A + + +L G N L N ++E + +
Sbjct: 418 VLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAA 477
Query: 324 KGFLPGFVT----------------------GFSPSHVTYNAIIYGLCLLGRAEEALGVL 361
G VT G +P +YN++I L E+ ++
Sbjct: 478 VGL--AVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLV 535
Query: 362 RGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE-NMISWLGIWGLFEDTRKSL 420
+ E+ PD +Y V+ C+ + A+ + ++E + + I+ +
Sbjct: 536 NIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQ 595
Query: 421 MQGLSNEDTFSSLMNDYLAQDE 442
+ + E+TF+ ++ + DE
Sbjct: 596 GRVVEAEETFAKMLESGIQPDE 617
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 142/348 (40%), Gaps = 42/348 (12%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRM-XXXXXXXXXM 148
+N L+ + +D+ + M ++G++ N+ +++ ++ C +G +
Sbjct: 310 FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNT 369
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
+D++ + YT+LI F KG KA +L M+D+G P TY L++ L L
Sbjct: 370 GSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHEL 429
Query: 205 EDAVGVFRGMTER----------DLSPDVVTYNTLISKFCKLKEPDLEK----------- 243
+ A+ + + + + DL V +L+ + + K+ +L
Sbjct: 430 KYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIAR-KDANLAAVGLAVVTTALC 488
Query: 244 -------AFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNE 296
A +MV+ G P +Y +I+ L + + + L + P+ +
Sbjct: 489 SQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVD 548
Query: 297 TYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEE 356
TY ++N + AF + D M G P+ Y++II L GR E
Sbjct: 549 TYLIVVNELCKKNDRDAAFAIIDAMEE--------LGLRPTVAIYSSIIGSLGKQGRVVE 600
Query: 357 ALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
A M E G+ PD ++Y +I + R +A EL EV ++ +
Sbjct: 601 AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFL 648
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 123/341 (36%), Gaps = 45/341 (13%)
Query: 35 IIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALV 94
++ F ++ +S G L + GV + R I +V +++ +++V
Sbjct: 81 LVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVI--GNGIVPDSSVLDSMV 138
Query: 95 LAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD-- 152
R DEA L + G P+ S + VV LC + R + ++
Sbjct: 139 FCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSG 198
Query: 153 ----------------------------------LAPDERTYTSLIHLFCDKGHPGKARK 178
+ Y SL + FC +G +A
Sbjct: 199 LWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEA 258
Query: 179 VLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFC 234
+ M G+ Y L++ + A+ ++ M ER D +NTLI F
Sbjct: 259 LFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFM 318
Query: 235 KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLF-REMLRWGVSP 293
KL L+K M ++M+ KG+ + TY +I + C + + A LF +S
Sbjct: 319 KLGM--LDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISR 376
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
N YT L+ + +G KA L M G +P +T F
Sbjct: 377 NVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYF 417
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 144/356 (40%), Gaps = 37/356 (10%)
Query: 109 ILRC---MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIH 165
IL C + + +P++I FN ++ K + + + P E TY LI
Sbjct: 161 ILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIK 220
Query: 166 LFCDKGHPGKARKVLSEMIDSGFSPS---VATYNRLI-----RRLRLEDAVGVFRGMTER 217
+C G +A VL EM + SP V YN I R+ E+A+ VF+ M
Sbjct: 221 AYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD 280
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
P TYN +I+ + K + + ++++ EM P+ TY L+ +
Sbjct: 281 RCKPTTETYNLMINLYGKASKSYM--SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCE 338
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
+A ++F ++ G+ P+ Y LM +Y G A + M H G P
Sbjct: 339 KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH--------MGCEPD 390
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKV 397
+YN ++ G +A V M +G++P S+ ++ + + R+ K +
Sbjct: 391 RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 450
Query: 398 EVDEN-----------MISWLGIWGLFEDTRKSLMQ---GLSNED--TFSSLMNDY 437
E+ EN M++ G G F K L + G D T++ L+N Y
Sbjct: 451 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIY 506
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 141/354 (39%), Gaps = 47/354 (13%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS---FNAVVQGLCG-KGRMXXXXXX 144
TY L+ AYC ++ A +L M + P I +NA ++GL KG
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 273
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----R 200
M + P TY +I+L+ + K+ EM P++ TY L+ R
Sbjct: 274 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 333
Query: 201 RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
E A +F + E L PDV YN L+ + + P A E+ + M H G PD
Sbjct: 334 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP--YGAAEIFSLMQHMGCEPDR 391
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
+Y ++ S+A +F EM R G++P +++ L++AY +K + E
Sbjct: 392 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 451
Query: 321 MTHKGFLP------------GFVTGFSPSH---------------VTYNAI--IYGLC-L 350
M+ G P G + F+ TYN + IYG
Sbjct: 452 MSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGF 511
Query: 351 LGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
L R EE L+ E PD V++ + I + R K Y +EV E MI
Sbjct: 512 LERIEELFVELK---EKNFRPDVVTWTSRIGAYSR----KKLYVKCLEVFEEMI 558
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 120/306 (39%), Gaps = 15/306 (4%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T TYN ++ Y + + + M KPN+ ++ A+V +G
Sbjct: 286 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 345
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRL 202
+ + L PD Y +L+ + G+P A ++ S M G P A+YN ++ R
Sbjct: 346 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 405
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
DA VF M ++P + ++ L+S + K + D+ K + EM G+ PD
Sbjct: 406 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKAR--DVTKCEAIVKEMSENGVEPDTFV 463
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
++ + ++ + EM + + TY L+N Y G + L E+
Sbjct: 464 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 523
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
K F P VT S +Y C L V M + G +PD + V+L
Sbjct: 524 EKNFRPDVVTWTSRIGAYSRKKLYVKC--------LEVFEEMIDSGCAPDGGT-AKVLLS 574
Query: 383 FCRIRE 388
C E
Sbjct: 575 ACSSEE 580
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 121/308 (39%), Gaps = 31/308 (10%)
Query: 25 LRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVV 84
+R+ PN+ +TA+ N + A E+ + E G+E +
Sbjct: 312 MRSHQCKPNICT--YTALVNAFAREGLCEKAEEIFEQLQEDGLEPD-------------- 355
Query: 85 DETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXX 144
YNAL+ +Y A I M G +P+ S+N +V G
Sbjct: 356 --VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 413
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRL 204
M + +AP +++ L+ + K ++ EM ++G P N + L L
Sbjct: 414 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM---LNL 470
Query: 205 EDAVGVFRGM----TERDLSP---DVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
+G F M E + P D+ TYN LI+ + K LE+ E+ E+ K
Sbjct: 471 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGK--AGFLERIEELFVELKEKNFR 528
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
PD T+ I ++ + ++F EM+ G +P+ T L++A E Q + +
Sbjct: 529 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSV 588
Query: 318 QDEMTHKG 325
M HKG
Sbjct: 589 LRTM-HKG 595
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 144/356 (40%), Gaps = 37/356 (10%)
Query: 109 ILRC---MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIH 165
IL C + + +P++I FN ++ K + + + P E TY LI
Sbjct: 139 ILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIK 198
Query: 166 LFCDKGHPGKARKVLSEMIDSGFSPS---VATYNRLI-----RRLRLEDAVGVFRGMTER 217
+C G +A VL EM + SP V YN I R+ E+A+ VF+ M
Sbjct: 199 AYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD 258
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
P TYN +I+ + K + + ++++ EM P+ TY L+ +
Sbjct: 259 RCKPTTETYNLMINLYGKASKSYM--SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCE 316
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPS 337
+A ++F ++ G+ P+ Y LM +Y G A + M H G P
Sbjct: 317 KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH--------MGCEPD 368
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKV 397
+YN ++ G +A V M +G++P S+ ++ + + R+ K +
Sbjct: 369 RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 428
Query: 398 EVDEN-----------MISWLGIWGLFEDTRKSLMQ---GLSNED--TFSSLMNDY 437
E+ EN M++ G G F K L + G D T++ L+N Y
Sbjct: 429 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIY 484
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 141/354 (39%), Gaps = 47/354 (13%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS---FNAVVQGLCG-KGRMXXXXXX 144
TY L+ AYC ++ A +L M + P I +NA ++GL KG
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----R 200
M + P TY +I+L+ + K+ EM P++ TY L+ R
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 311
Query: 201 RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
E A +F + E L PDV YN L+ + + P A E+ + M H G PD
Sbjct: 312 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP--YGAAEIFSLMQHMGCEPDR 369
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
+Y ++ S+A +F EM R G++P +++ L++AY +K + E
Sbjct: 370 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 429
Query: 321 MTHKGFLP------------GFVTGFSPSH---------------VTYNAI--IYGLC-L 350
M+ G P G + F+ TYN + IYG
Sbjct: 430 MSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGF 489
Query: 351 LGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
L R EE L+ E PD V++ + I + R K Y +EV E MI
Sbjct: 490 LERIEELFVELK---EKNFRPDVVTWTSRIGAYSR----KKLYVKCLEVFEEMI 536
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 120/306 (39%), Gaps = 15/306 (4%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T TYN ++ Y + + + M KPN+ ++ A+V +G
Sbjct: 264 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 323
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRL 202
+ + L PD Y +L+ + G+P A ++ S M G P A+YN ++ R
Sbjct: 324 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 383
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
DA VF M ++P + ++ L+S + K + D+ K + EM G+ PD
Sbjct: 384 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKAR--DVTKCEAIVKEMSENGVEPDTFV 441
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
++ + ++ + EM + + TY L+N Y G + L E+
Sbjct: 442 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 501
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
K F P VT S +Y C L V M + G +PD + V+L
Sbjct: 502 EKNFRPDVVTWTSRIGAYSRKKLYVKC--------LEVFEEMIDSGCAPDGGT-AKVLLS 552
Query: 383 FCRIRE 388
C E
Sbjct: 553 ACSSEE 558
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 121/308 (39%), Gaps = 31/308 (10%)
Query: 25 LRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVV 84
+R+ PN+ +TA+ N + A E+ + E G+E +
Sbjct: 290 MRSHQCKPNICT--YTALVNAFAREGLCEKAEEIFEQLQEDGLEPD-------------- 333
Query: 85 DETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXX 144
YNAL+ +Y A I M G +P+ S+N +V G
Sbjct: 334 --VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRL 204
M + +AP +++ L+ + K ++ EM ++G P N + L L
Sbjct: 392 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM---LNL 448
Query: 205 EDAVGVFRGM----TERDLSP---DVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
+G F M E + P D+ TYN LI+ + K LE+ E+ E+ K
Sbjct: 449 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGK--AGFLERIEELFVELKEKNFR 506
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
PD T+ I ++ + ++F EM+ G +P+ T L++A E Q + +
Sbjct: 507 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSV 566
Query: 318 QDEMTHKG 325
M HKG
Sbjct: 567 LRTM-HKG 573
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 136/325 (41%), Gaps = 18/325 (5%)
Query: 52 VGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILR 111
V E+L+ E+ + +R R + E +N L+ A C V E +LR
Sbjct: 199 VDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLR 258
Query: 112 CMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKG 171
M R +KP+ +FN + G C M + P+ TY + I FC G
Sbjct: 259 RMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG 317
Query: 172 HPGKARKVLSEMIDSG---FSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVV 224
+A + MI G +P+ T+ +I L + E+ + M PDV
Sbjct: 318 MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVS 377
Query: 225 TYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFR 284
TY +I C ++ D +A++ EM +KG PD TY +R LC ++ EA L+
Sbjct: 378 TYKDVIEGMCMAEKVD--EAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYG 435
Query: 285 EMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAI 344
M+ +P+ +TY L++ + AF+ EM + + TY A+
Sbjct: 436 RMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDV--------ETYCAM 487
Query: 345 IYGLCLLGRAEEALGVLRGMPEIGL 369
I GL RA+EA +L + GL
Sbjct: 488 INGLFDCHRAKEACFLLEEVVNKGL 512
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 120/302 (39%), Gaps = 30/302 (9%)
Query: 103 VDEAMGILRCMTERGL----------------KPNLISFNAVVQGLCGKGRMXXXXXXXX 146
VD + ILR ER L +P + +FN ++ LC G +
Sbjct: 199 VDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLR 258
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M + + PD T+ L +C P KA K+L EMI++G P TY I
Sbjct: 259 RMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG 317
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD-LEKAFEMKAEMVHKGILPDAD 261
+++A +F M + + T T L + D E+ FE+ M+ G LPD
Sbjct: 318 MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVS 377
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
TY+ +I +C+ +++ EAY EM G P+ TY + + +A L M
Sbjct: 378 TYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRM 437
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+ +PS TYN +I + + A M + D +YC +I
Sbjct: 438 VE--------SRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN 489
Query: 382 GF 383
G
Sbjct: 490 GL 491
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 137/325 (42%), Gaps = 22/325 (6%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+ + YN+++ Y + EA +++ M E G+ PN +S++ ++ +
Sbjct: 256 ITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEAL 315
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M + + A D T +I ++ +A ++ + P+V +YN ++R
Sbjct: 316 SVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVY 375
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
+A+ +FR M +D+ +VVTYNT+I + K E EKA + EM +GI P
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEH--EKATNLVQEMQSRGIEP 433
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
+A TY +I +L A LF+++ GV + Y ++ AY G A L
Sbjct: 434 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
E+ P ++ I L GR EEA V R E G D +
Sbjct: 494 HELK------------LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGC 541
Query: 379 VILGFCRIREPGKAYELKVEVDENM 403
+I + R + Y +EV E M
Sbjct: 542 MINLYSR----NQRYVNVIEVFEKM 562
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 127/307 (41%), Gaps = 53/307 (17%)
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
E P++ ++N V++ + + M Q+ LAPD TY++LI F +G
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 175 KARKVLSEMIDSGFSPSVATYNRLI---RRL-RLEDAVGVFRGMTERDLSPDVVTYNTLI 230
A L +M S + Y+ LI RRL A+ +F + ++PD+V YN++I
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM---- 286
+ + K K +A + EM G+LP+ +Y L+ + EA +F EM
Sbjct: 268 NVYGKAKL--FREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 287 --------------------------LRWG-----VSPNNETYTGLMNAYRIEGQFSKAF 315
L W + PN +Y ++ Y F +A
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAI--IYGLCLLGRAEEALGVLRGMPEIGLSPDA 373
HL M K + VTYN + IYG + E+A +++ M G+ P+A
Sbjct: 386 HLFRLMQRK--------DIEQNVVTYNTMIKIYGKTM--EHEKATNLVQEMQSRGIEPNA 435
Query: 374 VSYCTVI 380
++Y T+I
Sbjct: 436 ITYSTII 442
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 148/323 (45%), Gaps = 30/323 (9%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ---GLCGKGRMXXXXXXX 145
TY+ L+ ++ + D A+ L+ M + + +L+ ++ +++ LC +
Sbjct: 192 TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSK---AISIF 248
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL----IRR 201
+ + + PD Y S+I+++ +AR ++ EM ++G P+ +Y+ L +
Sbjct: 249 SRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVEN 308
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL---KEPDLEKAFEMKAEMVHKGILP 258
+ +A+ VF M E + + D+ T N +I + +L KE D + F +M I P
Sbjct: 309 HKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEAD--RLFWSLRKM---DIEP 363
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
+ +Y ++R + EA LFR M R + N TY ++ Y + KA +L
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
EM + G P+ +TY+ II G+ + A + + + G+ D V Y T
Sbjct: 424 QEMQSR--------GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 475
Query: 379 VILGFCRIREPGKA----YELKV 397
+I+ + R+ G A +ELK+
Sbjct: 476 MIVAYERVGLMGHAKRLLHELKL 498
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 121/302 (40%), Gaps = 78/302 (25%)
Query: 185 DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK----- 235
++ ++PSV YN ++R + + + A G+F M +R L+PD TY+TLI+ F K
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 236 -----LKEP-----------------------DLEKAFEMKAEMVHKGILPDADTYEPLI 267
L++ D KA + + + GI PD Y +I
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH---- 323
+ EA L +EM GV PN +Y+ L++ Y +F +A + EM
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 324 -----------------------KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAE---EA 357
+ F P+ V+YN I L + G AE EA
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTI---LRVYGEAELFGEA 384
Query: 358 LGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVE-----VDENMISW---LGI 409
+ + R M + + V+Y T+I + + E KA L E ++ N I++ + I
Sbjct: 385 IHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISI 444
Query: 410 WG 411
WG
Sbjct: 445 WG 446
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 119/292 (40%), Gaps = 20/292 (6%)
Query: 20 RLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIRE 79
RL LR PNV+ + + + E++ G A L + K +E N V
Sbjct: 351 RLFWSLRKMDIEPNVV--SYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVV------- 401
Query: 80 AEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
TYN ++ Y ++A +++ M RG++PN I+++ ++ G++
Sbjct: 402 ---------TYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 452
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI 199
+ + D+ Y ++I + G G A+++L E+ P L
Sbjct: 453 RAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILA 512
Query: 200 RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+ R E+A VFR E D+ + +I+ + + + E+ +M G PD
Sbjct: 513 KAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQR--YVNVIEVFEKMRTAGYFPD 570
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
++ ++ Q+ +A ++REM G +E + +++ Y + F
Sbjct: 571 SNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDF 622
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 139/346 (40%), Gaps = 54/346 (15%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS----------GRRIREAE 81
P+++ + ++ N+ ++K A L+K E GV N+VS + EA
Sbjct: 258 PDLV--AYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEAL 315
Query: 82 QVVDET---------TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
V E TT N ++ Y + V EA + + + ++PN++S+N +++
Sbjct: 316 SVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVY 375
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
M +KD+ + TY ++I ++ KA ++ EM G P+
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNA 435
Query: 193 ATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCK------------- 235
TY+ +I + +L+ A +F+ + + D V Y T+I + +
Sbjct: 436 ITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHE 495
Query: 236 LKEPD----------------LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEA 279
LK PD E+A + + G + D + +I QR
Sbjct: 496 LKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNV 555
Query: 280 YDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
++F +M G P++ ++NAY + +F KA + EM +G
Sbjct: 556 IEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 18/296 (6%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
V +T N+L+ A + ++ A + + + +KP+ +FN ++ G C +
Sbjct: 235 VKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDAR 293
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M + PD TYTS + +C +G + ++L EM ++G +P+V TY ++ L
Sbjct: 294 AMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSL 353
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
++ +A+GV+ M E PD Y++LI K + A E+ +M ++G+
Sbjct: 354 GKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGR--FKDAAEIFEDMTNQGVRR 411
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLR---WGVSPNNETYTGLMNAYRIEGQFSKAF 315
D Y +I R A L + M SPN ETY L+ + +
Sbjct: 412 DVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLG 471
Query: 316 HLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
L M S TY +I GLC+ G+ EEA G+ P
Sbjct: 472 ILLHHMVK--------NDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 9/225 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ TY + V AYC + +L M E G PN++++ V+ L ++
Sbjct: 307 DVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVY 366
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RR 201
M + PD + Y+SLIH+ G A ++ +M + G V YN +I
Sbjct: 367 EKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHH 426
Query: 202 LRLEDAVGVFRGMTERD---LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
R E A+ + + M + + SP+V TY L+ C K+ L + MV +
Sbjct: 427 SRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGI--LLHHMVKNDVSI 484
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMN 303
D TY LIR LC+ ++ EA F E +R G+ P + T L++
Sbjct: 485 DVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVD 529
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Query: 191 SVATYNRLIRRL----RLEDAVGVFRGMTER-DLSPDVVTYNTLISKFCKLKEPDLEKAF 245
++ T ++++RRL + AV F M + + D + N+L+ +KE +E A
Sbjct: 202 TLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDAL--VKENSIEHAH 259
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY 305
E+ ++ I PDA T+ LI C ++ +A + M +P+ TYT + AY
Sbjct: 260 EVFLKLF-DTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAY 318
Query: 306 RIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMP 365
EG F + + +EM G +P+ VTY +++ L + EALGV M
Sbjct: 319 CKEGDFRRVNEMLEEMRE--------NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMK 370
Query: 366 EIGLSPDAVSYCTVI 380
E G PDA Y ++I
Sbjct: 371 EDGCVPDAKFYSSLI 385
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 225 TYNTLISKFCKLKEPDLEKAFEMKAEMV--HKGILPDADTYEPLIRTLCLQQRLSEAYDL 282
TYN ++ K + DL +E+ EM + L DT ++R L + ++A D
Sbjct: 168 TYNAMVDVLGKCRNFDL--MWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDA 225
Query: 283 FREMLR-WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTY 341
F EM + +GV + LM+A E A H+ FL F T P T+
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHA--------HEVFLKLFDT-IKPDARTF 276
Query: 342 NAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
N +I+G C + ++A ++ M +PD V+Y + + +C+ + + E+ E+ E
Sbjct: 277 NILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRE 336
Query: 402 N 402
N
Sbjct: 337 N 337
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 165/397 (41%), Gaps = 45/397 (11%)
Query: 77 IREAEQVVDETT-----TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQG 131
I +A +V D T++A++ AY + R E + R M + G+ P+ F ++QG
Sbjct: 131 IADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQG 190
Query: 132 LCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPS 191
G + + + ++ R S++ ++ G A K M +
Sbjct: 191 CANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----D 246
Query: 192 VATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM 247
V +N ++ + + E+AV + + M + +SP +VT+N LI + +L + D A ++
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD--AAMDL 304
Query: 248 KAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRI 307
+M GI D T+ +I L +A D+FR+M GV PN T ++A
Sbjct: 305 MQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSC 364
Query: 308 EGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHV-----------------------TYNAI 344
++ + GF+ + G S + T+N++
Sbjct: 365 LKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSM 424
Query: 345 IYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL------KVE 398
I G C G +A + M + L P+ +++ T+I G+ + + G+A +L +
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGK 484
Query: 399 VDENMISW-LGIWGLFEDTRKSLMQGLSNEDTFSSLM 434
V N +W L I G ++ +K L + FS M
Sbjct: 485 VQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFM 521
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 40/330 (12%)
Query: 75 RRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCG 134
RR+RE + + +N+++LAYC + + +EA+ +++ M + G+ P L+++N ++ G
Sbjct: 240 RRMRERDVI-----AWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 135 KGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT 194
G+ M + D T+T++I G +A + +M +G P+ T
Sbjct: 295 LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Query: 195 YN---------RLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL-KEPDLEKA 244
++I + ++ V G + DV+ N+L+ + K K D K
Sbjct: 355 IMSAVSACSCLKVINQGSEVHSIAVKMGFID-----DVLVGNSLVDMYSKCGKLEDARKV 409
Query: 245 FEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNA 304
F+ D T+ +I C +AY+LF M + PN T+ +++
Sbjct: 410 FDSVKN-------KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 305 YRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGM 364
Y G +A L M G + + T+N II G G+ +EAL + R M
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKV-------QRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Query: 365 PEIGLSPDAVSY------CTVILGFCRIRE 388
P++V+ C +LG +RE
Sbjct: 516 QFSRFMPNSVTILSLLPACANLLGAKMVRE 545
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 159/435 (36%), Gaps = 81/435 (18%)
Query: 19 LRLSTCLRNRLSPPNVIIRGFTAVGNLQSESK--------KVGGAFELLKAGTEKGVESN 70
L +S+CLR N I+ + G L +K V +L A + G
Sbjct: 210 LGMSSCLR----VSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEE 265
Query: 71 SVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
+V + E E + T+N L+ Y + D AM +++ M G+ ++ ++ A++
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMIS 325
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
GL G M + P+ T S + + +V S + GF
Sbjct: 326 GLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID 385
Query: 191 SVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFE 246
V N L+ +LEDA VF + +D V T+N++I+ +C+ KA+E
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD----VYTWNSMITGYCQAGY--CGKAYE 439
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG-VSPNNETYTGLMNAY 305
+ M + P+ T+ +I EA DLF+ M + G V N T+ ++ Y
Sbjct: 440 LFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGY 499
Query: 306 RIEG------------QFSK-------------------------------------AFH 316
G QFS+ A H
Sbjct: 500 IQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIH 559
Query: 317 -----LQDEMTHKGFLPGFVTGF----SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEI 367
L D G + T F + +T+N++I G L G AL + M
Sbjct: 560 AVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQ 619
Query: 368 GLSPDAVSYCTVILG 382
G++P+ + ++IL
Sbjct: 620 GITPNRGTLSSIILA 634
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 119/331 (35%), Gaps = 63/331 (19%)
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGM 214
PD T L+ ++ G ARKV M + A R R + +FR M
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 215 TERDLSPDVVTY-----------------------------------NTLISKFCKLKEP 239
+ + PD + N++++ + K E
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 232
Query: 240 DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT 299
D F + D + ++ C + EA +L +EM + G+SP T+
Sbjct: 233 DFATKFFRRMRE------RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 300 GLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALG 359
L+ Y G+ A L +M G + T+ A+I GL G +AL
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKME--------TFGITADVFTWTAMISGLIHNGMRYQALD 338
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELK-----------VEVDENMISWLG 408
+ R M G+ P+AV+ + + ++ + E+ V V +++
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398
Query: 409 IWGLFEDTRKSLMQGLSNED--TFSSLMNDY 437
G ED RK + + N+D T++S++ Y
Sbjct: 399 KCGKLEDARK-VFDSVKNKDVYTWNSMITGY 428
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 167/379 (44%), Gaps = 49/379 (12%)
Query: 35 IIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDE-----TTT 89
+I G+ +G+++ + T + S + +++ AE + E +
Sbjct: 83 VITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS 142
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
+N ++ Y R+D+A+ + M ER N++S+N++V+ L +GR+ M
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMP 198
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVG 209
++D+ ++T+++ G +AR++ M + A + R+++A
Sbjct: 199 RRDVV----SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQ 254
Query: 210 VFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRT 269
+F+ M ERD + ++NT+I+ F + +E + KA + M K ++ ++ +I
Sbjct: 255 LFQVMPERDFA----SWNTMITGFIRNRE--MNKACGLFDRMPEKNVI----SWTTMITG 304
Query: 270 LCLQQRLSEAYDLFREMLRWG-VSPNNETYTGLMNAYR-----IEGQ-----FSKAFHLQ 318
+ EA ++F +MLR G V PN TY +++A +EGQ SK+ H +
Sbjct: 305 YVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQK 364
Query: 319 DEMTHKGFL-------------PGFVTGFSPSH--VTYNAIIYGLCLLGRAEEALGVLRG 363
+E+ L F G +++N++I G +EA+ +
Sbjct: 365 NEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQ 424
Query: 364 MPEIGLSPDAVSYCTVILG 382
M + G P AV+Y ++
Sbjct: 425 MRKHGFKPSAVTYLNLLFA 443
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 101/261 (38%), Gaps = 18/261 (6%)
Query: 76 RIREAEQVVD-----ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
++ EA ++ D ++NA++ Y + R+DEA + + M ER + S+N ++
Sbjct: 217 KVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMIT 272
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI-DSGFS 189
G M M +K++ ++T++I + + +A V S+M+ D
Sbjct: 273 GFIRNREMNKACGLFDRMPEKNVI----SWTTMITGYVENKENEEALNVFSKMLRDGSVK 328
Query: 190 PSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKA 249
P+V TY ++ D G+ G L V I L
Sbjct: 329 PNVGTYVSILS--ACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR 386
Query: 250 EMVHKGILPDAD--TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRI 307
+M G++ D ++ +I EA +++ +M + G P+ TY L+ A
Sbjct: 387 KMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSH 446
Query: 308 EGQFSKAFHLQDEMTHKGFLP 328
G K ++ LP
Sbjct: 447 AGLVEKGMEFFKDLVRDESLP 467
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 143/351 (40%), Gaps = 50/351 (14%)
Query: 94 VLAYCCDER-VDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
+L CC V EA ++ M G+ ++ ++ +V G G M Q
Sbjct: 218 ILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIG 277
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAV 208
+P+ TYTSLI F D G +A VLS++ G +P + N +I R R E+A
Sbjct: 278 CSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEAR 337
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL--------------------------- 241
VF + +R L PD T+ +++S C + DL
Sbjct: 338 KVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKI 397
Query: 242 ---EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETY 298
A ++ + M +K D TY + LC A +++ +++ + +
Sbjct: 398 GYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFH 457
Query: 299 TGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEAL 358
+ ++++ G+++ A HL F + + V+Y I GL R EEA
Sbjct: 458 SAIIDSLIELGKYNTAVHL--------FKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAY 509
Query: 359 GVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL-------KVEVDEN 402
+ M E G+ P+ +Y T+I G C+ +E K ++ VE+D N
Sbjct: 510 SLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPN 560
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 121/282 (42%), Gaps = 20/282 (7%)
Query: 121 NLISFNAVVQGLC---GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
N SF+ + C G+G + M + P+ + ++ L C G +A
Sbjct: 173 NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAF 232
Query: 178 KVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
+V+ MI SG S SV ++ L+ R + AV +F M + SP++VTY +LI F
Sbjct: 233 QVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGF 292
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
L D +AF + +++ +G+ PD +I T R EA +F + + + P
Sbjct: 293 VDLGMVD--EAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVP 350
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
+ T+ ++++ + G+F L +TH G T F VT N + +G
Sbjct: 351 DQYTFASILSSLCLSGKFD----LVPRITH-----GIGTDFDL--VTGNLLSNCFSKIGY 399
Query: 354 AEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
AL VL M + D +Y + CR P A ++
Sbjct: 400 NSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKM 441
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 145/354 (40%), Gaps = 50/354 (14%)
Query: 109 ILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFC 168
+L+ M G PN F +++ C G + M ++ ++ L+ F
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 169 DKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVV 224
G P KA + ++MI G SP++ TY LI+ +++A V + L+PD+V
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 225 TYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFR 284
N +I + +L E+A ++ + + ++PD T+ ++ +LCL S +DL
Sbjct: 319 LCNLMIHTYTRLGR--FEEARKVFTSLEKRKLVPDQYTFASILSSLCL----SGKFDLVP 372
Query: 285 EMLRWGVSPNNETYTG--LMNAYRIEGQFSKAFHLQDEMTHKGF----------LPGFVT 332
+ G+ + + TG L N + G S A + M++K F L
Sbjct: 373 RITH-GIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR 431
Query: 333 GFSPSHVT-----------------YNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVS 375
G +P ++AII L LG+ A+ + + D VS
Sbjct: 432 GGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVS 491
Query: 376 YCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFEDTR--KSLMQGLSNE 427
Y I G R + +AY L ++ E G++ + R ++++ GL E
Sbjct: 492 YTVAIKGLVRAKRIEEAYSLCCDMKEG--------GIYPNRRTYRTIISGLCKE 537
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 25/293 (8%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
TY +L+ + VDEA +L + GL P+++ N ++ GR
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTS 342
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL---IRRLRL 204
+ ++ L PD+ T+ S++ C G ++ + G + T N L ++
Sbjct: 343 LEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGY 399
Query: 205 ED-AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
A+ V M+ +D + D TY +S C+ P A +M ++ + DA +
Sbjct: 400 NSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAP--RAAIKMYKIIIKEKKHLDAHFH 457
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT----GLMNAYRIEGQFSKAFHLQD 319
+I +L + + A LF+ + + +YT GL+ A RIE +S +++
Sbjct: 458 SAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKE 517
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
G P+ TY II GLC E+ +LR + G+ D
Sbjct: 518 ------------GGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 119/298 (39%), Gaps = 49/298 (16%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
L+K + G+ + + ++E + + N ++ Y R +EA + + +R
Sbjct: 288 LIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRK 347
Query: 118 LKPNLISFNAVVQGLCGKGRM--------------------------------XXXXXXX 145
L P+ +F +++ LC G+
Sbjct: 348 LVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVL 407
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI------DSGFSPSVATYNRLI 199
M+ KD A D TYT + C G P A K+ +I D+ F ++ + LI
Sbjct: 408 SIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAII--DSLI 465
Query: 200 RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+ AV +F+ DVV+Y I + K +E+A+ + +M GI P+
Sbjct: 466 ELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKR--IEEAYSLCCDMKEGGIYPN 523
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV--SPNN--ETYTGLMNAYRIEGQFSK 313
TY +I LC ++ + + RE ++ GV PN + Y+ L++ YR G FS+
Sbjct: 524 RRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYS-LLSRYR--GDFSE 578
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 141/345 (40%), Gaps = 24/345 (6%)
Query: 39 FTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTT--YNALVLA 96
F GN+ SE G + A E+G S + R+ Q V++ T YN ++ A
Sbjct: 463 FHVAGNMSSE-----GYSANIDAYGERGYLSEA---ERVFICCQEVNKRTVIEYNVMIKA 514
Query: 97 YCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPD 156
Y + ++A + M G+ P+ ++N +VQ L M + D
Sbjct: 515 YGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSD 574
Query: 157 ERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFR 212
Y ++I F G A +V EM++ P V Y LI ++ A+
Sbjct: 575 CIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVE 634
Query: 213 GMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK-AEMVHKGILPDADTYEPLIRTLC 271
M E + + V YN+LI + K+ D +A K + +K PD T +I
Sbjct: 635 AMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYS 694
Query: 272 LQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFV 331
+ + +A +F M + G N T+ ++ Y+ G+F +A + +M L
Sbjct: 695 ERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKIL---- 749
Query: 332 TGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
++YN+++ L GR +EA+ + M G+ PD ++
Sbjct: 750 ----TDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTF 790
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 128/327 (39%), Gaps = 31/327 (9%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
TYN ++ Y ++ EA + M E G+ P ++FN ++ G++ M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----RLRL 204
+ APD RTY LI L +A EM D G P +Y L+ R +
Sbjct: 360 -KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKL----KEPDLEKAFEMKAEMVHKGILPDA 260
E+A G+ M + ++ D T + L + + K K F + M +G +
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANI 478
Query: 261 DTYEPLIRTLCLQQRLSEAYDLF---REMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
D Y + LSEA +F +E+ + V Y ++ AY I KA L
Sbjct: 479 DAYGE-------RGYLSEAERVFICCQEVNKRTVIE----YNVMIKAYGISKSCEKACEL 527
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
+ M G +P TYN ++ L + L M E G D + YC
Sbjct: 528 FESM--------MSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYC 579
Query: 378 TVILGFCRIREPGKAYELKVEVDENMI 404
VI F ++ + A E+ E+ E I
Sbjct: 580 AVISSFVKLGQLNMAEEVYKEMVEYNI 606
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 125/301 (41%), Gaps = 25/301 (8%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
Y+A + AY + EA + C E K +I +N +++ M
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFESMM 532
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFS----PSVATYNRLIRRLRLE 205
+ PD+ TY +L+ + P K R L +M ++G+ P A + ++ +L
Sbjct: 533 SYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLN 592
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
A V++ M E ++ PDVV Y LI+ F ++++A M GI ++ Y
Sbjct: 593 MAEEVYKEMVEYNIEPDVVVYGVLINAFADT--GNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 266 LIRTLCLQQRLSEAYDLFREMLRW---GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
LI+ L EA ++R++L+ P+ T ++N Y KA + D M
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK 710
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLL---GRAEEALGVLRGMPEIGLSPDAVSYCTV 379
+G F LC+ GR EEA + + M E+ + D +SY +V
Sbjct: 711 QRGEANEFTFAMM------------LCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSV 758
Query: 380 I 380
+
Sbjct: 759 L 759
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 134/338 (39%), Gaps = 50/338 (14%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+T TYN L+ + + ++ A + M + GLKP+ +S+ ++ + +
Sbjct: 366 DTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLI 425
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARK------VLSEMIDSGFSP--------- 190
M+ ++ DE T ++L ++ + K+ V M G+S
Sbjct: 426 AEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERG 485
Query: 191 ------------------SVATYNRLIRRLRL----EDAVGVFRGMTERDLSPDVVTYNT 228
+V YN +I+ + E A +F M ++PD TYNT
Sbjct: 486 YLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNT 545
Query: 229 LISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
L+ P + + K M G + D Y +I + +L+ A ++++EM+
Sbjct: 546 LVQILASADMPHKGRCYLEK--MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVE 603
Query: 289 WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGL 348
+ + P+ Y L+NA+ G +A + M G +PG + V YN++I
Sbjct: 604 YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG-IPG-------NSVIYNSLIKLY 655
Query: 349 CLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
+G +EA + R + + S + Y V C I
Sbjct: 656 TKVGYLDEAEAIYRKLLQ---SCNKTQYPDVYTSNCMI 690
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 22/246 (8%)
Query: 171 GHPGKARKVLS---EMIDSGFSPSVATYNRLIRR-----LRLEDAVGVFRGMTERDLSPD 222
G K R V S EMI G P +TY LI L++ A+ M++ + PD
Sbjct: 198 GKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVH-ALCWLGKMSKIGMQPD 256
Query: 223 VVTYNTLISKFCKLKE----PDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE 278
VT ++ + K +E + K + + + TY +I T ++ E
Sbjct: 257 EVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKE 316
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSH 338
A + F+ ML G+ P T+ +++ Y GQ + L M +P
Sbjct: 317 ASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK---------LHCAPDT 367
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVE 398
TYN +I E A + M + GL PD VSY T++ F +A L E
Sbjct: 368 RTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAE 427
Query: 399 VDENMI 404
+D++ +
Sbjct: 428 MDDDNV 433
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 23/219 (10%)
Query: 66 GVESNSVSGRRIREAEQVVDETTTYN---------ALVLAYCCDERVDEAMGILRCMTER 116
V S+ V ++ AE+V E YN L+ A+ V +AM + M E
Sbjct: 580 AVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEA 639
Query: 117 GLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQ---KDLAPDERTYTSLIHLFCDKGHP 173
G+ N + +N++++ G + + Q K PD T +I+L+ ++
Sbjct: 640 GIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMV 699
Query: 174 GKARKVLSEMIDSG------FSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYN 227
KA + M G F+ + Y + R E+A + + M E + D ++YN
Sbjct: 700 RKAEAIFDSMKQRGEANEFTFAMMLCMYKK---NGRFEEATQIAKQMREMKILTDPLSYN 756
Query: 228 TLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
+++ F + ++A E EMV GI PD T++ L
Sbjct: 757 SVLGLFAL--DGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 145/357 (40%), Gaps = 33/357 (9%)
Query: 7 SMLLTRPNPMKLLRLSTCLRNRLSPPNVIIR-GFTAVGNLQSESKKVGGAFELLKAGTEK 65
S+L + +P ++L + C L+P I R F+A +E K LL E
Sbjct: 52 SLLKSEKDPDRILEI--CRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIEN 109
Query: 66 GVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISF 125
+ S E +A+VL Y +D ++ + R + + + + S
Sbjct: 110 RPDLKS--------------ERFAAHAIVL-YAQANMLDHSLRVFRDLEKFEISRTVKSL 154
Query: 126 NAVVQG-LCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
NA++ L K + PD TY +I +FC+ G + +++EM
Sbjct: 155 NALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEME 214
Query: 185 DSGFSPSVATYNRLIRRLRLEDA---VG-VFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
G P+ +++ +I ED VG V M +R ++ V TYN I CK K+
Sbjct: 215 RKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSK 274
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
KA + M+ G+ P+ TY LI C + EA LF+ M+ G P++E Y
Sbjct: 275 EAKA--LLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT 332
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEA 357
L+ G F A L E K ++P F +++ GL + EEA
Sbjct: 333 LIYYLCKGGDFETALSLCKESMEKNWVPSF--------SIMKSLVNGLAKDSKVEEA 381
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 7/241 (2%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTER-GLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
+ NAL+ A + EA + M + G++P+L ++N +++ C G
Sbjct: 153 SLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAE 212
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN----RLIRRLR 203
M +K + P+ ++ +I F + + KVL+ M D G + V+TYN L +R +
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
++A + GM + P+ VTY+ LI FC E D E+A ++ MV++G PD++ Y
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN--EDDFEEAKKLFKIMVNRGCKPDSECY 330
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
LI LC A L +E + P+ L+N + + +A L ++
Sbjct: 331 FTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Query: 324 K 324
K
Sbjct: 391 K 391
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 11/182 (6%)
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK-GILPDADT 262
L+ ++ VFR + + ++S V + N L+ F L D ++A + EM GI PD +T
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALL--FACLVAKDYKEAKRVYIEMPKMYGIEPDLET 189
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y +I+ C S +Y + EM R G+ PN+ ++ +++ + E + + + M
Sbjct: 190 YNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMK 249
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
+G G T YN I LC +++EA +L GM G+ P+ V+Y +I G
Sbjct: 250 DRGVNIGVST--------YNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 383 FC 384
FC
Sbjct: 302 FC 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
++++ ++ + +++ DE +L M +RG+ + ++N +Q LC + +
Sbjct: 222 SSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLD 281
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M + P+ TY+ LIH FC++ +A+K+ M++ G P Y LI L
Sbjct: 282 GMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGG 341
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
E A+ + + E++ P +L++ K+ +E+A E+ ++ K
Sbjct: 342 DFETALSLCKESMEKNWVPSFSIMKSLVNGLA--KDSKVEEAKELIGQVKEK 391
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 16/222 (7%)
Query: 80 AEQVVDE---------TTTYNALVLAYCCDERVDEAMGILRCMTER-GLKPNLISFNAVV 129
A++V DE ++NAL+ A ++ D GI + + + ++P++ S+N ++
Sbjct: 125 AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLI 184
Query: 130 QGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFS 189
+GLCGKG + K L PD T+ L+H KG + ++ + M++
Sbjct: 185 KGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVK 244
Query: 190 PSVATYNRLIRRLRLEDA----VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF 245
+ +YN + L +E+ V +F + +L PDV T+ +I F + E L++A
Sbjct: 245 RDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF--VSEGKLDEAI 302
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREML 287
E+ G P + L+ +C L AY+L +E+
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIF 344
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ +YN L+ C EA+ ++ + +GLKP+ I+FN ++ KG+
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M +K++ D R+Y + + + + + ++ + P V T+ +I+
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+L++A+ ++ + + P +N+L+ CK DLE A+E+ E+ K +L D
Sbjct: 296 GKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKA--GDLESAYELCKEIFAKRLLVDEA 353
Query: 262 TYEPLIRTLCLQQRLSEAYDL 282
+ ++ L + EA ++
Sbjct: 354 VLQEVVDALVKGSKQDEAEEI 374
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 120/293 (40%), Gaps = 16/293 (5%)
Query: 112 CMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKG 171
C E + N+ + V+ L + N+ E +I+L+ G
Sbjct: 62 CQAE-WFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVG 120
Query: 172 HPGKARKVLSEMIDSGFSPSVATYNRL----IRRLRLEDAVGVFRGMTER-DLSPDVVTY 226
A+KV EM + + ++N L + + + G+F+ + + + PDV +Y
Sbjct: 121 MFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASY 180
Query: 227 NTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM 286
NTLI C + +A + E+ +KG+ PD T+ L+ + + E ++ M
Sbjct: 181 NTLIKGLCG--KGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARM 238
Query: 287 LRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIY 346
+ V + +Y + +E + + L D++ KG P T+ A+I
Sbjct: 239 VEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKL--KG------NELKPDVFTFTAMIK 290
Query: 347 GLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
G G+ +EA+ + + + G P + +++ C+ + AYEL E+
Sbjct: 291 GFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAF--EMKAEMVHKGILPDAD 261
E+A VF M ER+ +++N L++ K+ DL + E+ ++ I PD
Sbjct: 122 FENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL---SIEPDVA 178
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+Y LI+ LC + +EA L E+ G+ P++ T+ L++ +G+F + + M
Sbjct: 179 SYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARM 238
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
K +YNA + GL + ++EE + + + L PD ++ +I
Sbjct: 239 VEK--------NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIK 290
Query: 382 GFCRIREPGKAYELKVEVDEN 402
GF + +A E+++N
Sbjct: 291 GFVSEGKLDEAITWYKEIEKN 311
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 9/258 (3%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
V+ + TT+N LV Y ++ L M +G+KPN S AV LC G +
Sbjct: 940 VLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKAL 999
Query: 143 XXXXXMNQKDLAPDERTY-TSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M K T ++ KG KA L+ + +G Y+ +I++
Sbjct: 1000 DLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMA--PNYDNIIKK 1057
Query: 202 L----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
L L+ AV + M + P +Y+++I+ L+ L+KA + EMV G+
Sbjct: 1058 LSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGL--LRYNQLDKAMDFHTEMVELGLS 1115
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
P T+ L+ C ++ E+ L + M+ G SP+ E + +++ +R+E KA +
Sbjct: 1116 PSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEM 1175
Query: 318 QDEMTHKGFLPGFVTGFS 335
+ M G+ F T +S
Sbjct: 1176 MEMMQKCGYEVDFETHWS 1193
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 152/396 (38%), Gaps = 67/396 (16%)
Query: 79 EAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNL---------------- 122
E E + E YN L+ C +++ A IL M ++ P+L
Sbjct: 731 EGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKA 790
Query: 123 -ISFN------------AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCD 169
+FN A+++GL G+M M L+ + Y + +C
Sbjct: 791 GTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCK 850
Query: 170 KGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE----DAVGVFRGMTERDLSP-DVV 224
+ K +VL M+ SV +Y +R++ LE A+ + + + +P V+
Sbjct: 851 GNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVI 910
Query: 225 TYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFR 284
YN LI F + + + ++ EM +G+LPD T+ L+ S +
Sbjct: 911 IYNMLI--FYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLS 968
Query: 285 EMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG--------------- 329
M+ G+ PNN + + ++ G KA L M KG+ G
Sbjct: 969 AMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISK 1028
Query: 330 --------FVTGFSPSHV---TYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
F+T + + + Y+ II L G + A+ +L M + P + SY +
Sbjct: 1029 GEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDS 1088
Query: 379 VILGFCRIREPGKAYELKVEVDE-----NMISWLGI 409
VI G R + KA + E+ E ++ +W G+
Sbjct: 1089 VINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGL 1124
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 56/354 (15%)
Query: 73 SGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+G AEQ+ D + + AL+ ++ +A LR M GL +N + QG
Sbjct: 790 AGTAFNLAEQI-DSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGY 848
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFC-----------------DKGHPG- 174
C M +K++ ++Y + C + +PG
Sbjct: 849 CKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGG 908
Query: 175 ------------------KARKVLSEMIDSGFSPSVATYNRLIR----RLRLEDAVGVFR 212
+ KVL EM G P T+N L+ ++
Sbjct: 909 VIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLS 968
Query: 213 GMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI-LPDADTYEPLIRTLC 271
M + + P+ + + S C D++KA ++ M KG L + ++ TL
Sbjct: 969 AMISKGMKPNNRSLRAVTSSLCD--NGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLI 1026
Query: 272 LQQRLSEAYDLFREMLRWGV-SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGF 330
+ + +A D + R G+ +PN Y ++ G A HL + M +PG
Sbjct: 1027 SKGEIPKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPG- 1082
Query: 331 VTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
+Y+++I GL + ++A+ M E+GLSP ++ ++ FC
Sbjct: 1083 -------SSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFC 1129
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 113/306 (36%), Gaps = 42/306 (13%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
YN L+ + E +L M RG+ P+ +FN +V G M
Sbjct: 912 YNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMI 971
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVG 209
K + P+ R+ ++ CD G KA + M G++ + I
Sbjct: 972 SKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKI---------- 1021
Query: 210 VFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRT 269
TLISK ++ KA + + G++ A Y+ +I+
Sbjct: 1022 ----------------VETLISK------GEIPKAEDFLTRVTRNGMM--APNYDNIIKK 1057
Query: 270 LCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG 329
L + L A L ML+ P + +Y ++N Q KA EM
Sbjct: 1058 LSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVE------ 1111
Query: 330 FVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREP 389
G SPS T++ +++ C + E+ +++ M +G SP + TVI F +
Sbjct: 1112 --LGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNT 1169
Query: 390 GKAYEL 395
KA E+
Sbjct: 1170 VKASEM 1175
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 119/292 (40%), Gaps = 33/292 (11%)
Query: 124 SFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM 183
+ N +VQ C KG M Q D TYTSLI FC K V
Sbjct: 601 TLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAA 660
Query: 184 IDSGFSPSVAT----YNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP 239
+ + P + +N L+R+ +E+ V +F + ++Y S+ C++
Sbjct: 661 QNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERV--------FISYPLSQSEACRIFVE 712
Query: 240 DLEK-AFEMKAEMVHK-----GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
L F A V K G + + + Y LI+ LC +++ S A+ + EML P
Sbjct: 713 KLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIP 772
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
+ + L+ + AF+L +++ S+V Y A+I GL L G+
Sbjct: 773 SLGSCLMLIPRLCRANKAGTAFNLAEQI-------------DSSYVHY-ALIKGLSLAGK 818
Query: 354 AEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE-LKVEVDENMI 404
+A LR M GLS Y + G+C+ K E L + V +N+I
Sbjct: 819 MLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNII 870
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 14/261 (5%)
Query: 124 SFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM 183
++N V+Q L ++ + D +TY +L+ LF +KG P KA ++ M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 184 IDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP 239
+ +TY +I L RL+ A +F+ M ER L P +++L+ K
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR- 363
Query: 240 DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT 299
L+ + ++ EM G P A + LI + +L A L+ EM + G PN YT
Sbjct: 364 -LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYT 422
Query: 300 GLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALG 359
++ ++ G+ A + +M GFLP + TY+ ++ G+ + A+
Sbjct: 423 MIIESHAKSGKLEVAMTVFKDMEKAGFLP--------TPSTYSCLLEMHAGSGQVDSAMK 474
Query: 360 VLRGMPEIGLSPDAVSYCTVI 380
+ M GL P SY +++
Sbjct: 475 IYNSMTNAGLRPGLSSYISLL 495
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 16/258 (6%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
QV+ L +A+CC ++ E+ G K + ++N ++ KG
Sbjct: 248 QVIQYLAKAEKLEVAFCCFKKAQES----------GCKIDTQTYNNLMMLFLNKGLPYKA 297
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M + D D TY +I G A K+ +M + PS + ++ L+
Sbjct: 298 FEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDS 357
Query: 202 L----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
+ RL+ ++ V+ M P + +LI + K + L+ A + EM G
Sbjct: 358 MGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGK--LDTALRLWDEMKKSGFR 415
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
P+ Y +I + +L A +F++M + G P TY+ L+ + GQ A +
Sbjct: 416 PNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 475
Query: 318 QDEMTHKGFLPGFVTGFS 335
+ MT+ G PG + S
Sbjct: 476 YNSMTNAGLRPGLSSYIS 493
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 6/209 (2%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
+TY ++ + R+D A + + M ER L+P+ F+++V + GR+
Sbjct: 314 STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYME 373
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLR 203
M P + SLI + G A ++ EM SGF P+ Y +I + +
Sbjct: 374 MQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
LE A+ VF+ M + P TY+ L+ + D A ++ M + G+ P +Y
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVD--SAMKIYNSMTNAGLRPGLSSY 491
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
L+ L ++ + A + EM G S
Sbjct: 492 ISLLTLLANKRLVDVAGKILLEMKAMGYS 520
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 183/436 (41%), Gaps = 61/436 (13%)
Query: 14 NPMKLLRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFE--LLKAGTE------K 65
+P+ L+L C+ + PN F +S++ K G +LK G +
Sbjct: 114 DPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHT 173
Query: 66 GVESNSVSGRRIREAEQVVDET-----TTYNALVLAYCCDERVDEAMGILRCMTERGLKP 120
+ S V R+ +A +V D++ +Y AL+ Y ++ A + + +
Sbjct: 174 SLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK---- 229
Query: 121 NLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVL 180
+++S+NA++ G G M + ++ PDE T +++ G R+V
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 181 SEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL 236
+ D GF ++ N LI LE A G+F ER DV+++NTLI + +
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF----ERLPYKDVISWNTLIGGYTHM 345
Query: 237 KEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW------G 290
++A + EM+ G P+ T ++ L L A D+ R + + G
Sbjct: 346 NL--YKEALLLFQEMLRSGETPNDVT---MLSILPACAHLG-AIDIGRWIHVYIDKRLKG 399
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCL 350
V+ + T L++ Y G A + + + HK ++NA+I+G +
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL------------SSWNAMIFGFAM 447
Query: 351 LGRAEEALGVLRGMPEIGLSPDAVSYCTVI----------LGFCRIREPGKAYEL--KVE 398
GRA+ + + M +IG+ PD +++ ++ LG R + Y++ K+E
Sbjct: 448 HGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLE 507
Query: 399 VDENMISWLGIWGLFE 414
MI LG GLF+
Sbjct: 508 HYGCMIDLLGHSGLFK 523
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 128/302 (42%), Gaps = 40/302 (13%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
+N + + A+ + CM GL PN +F V++ C K +
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS-CAKSKAFKEGQQIHGHV 160
Query: 150 QK---DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----RL 202
K DL D +TSLI ++ G A KV D V +Y LI+ R
Sbjct: 161 LKLGCDL--DLYVHTSLISMYVQNGRLEDAHKVF----DKSPHRDVVSYTALIKGYASRG 214
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
+E+A +F + + DVV++N +IS + + + ++A E+ +M+ + PD T
Sbjct: 215 YIENAQKLFDEIPVK----DVVSWNAMISGYA--ETGNYKEALELFKDMMKTNVRPDEST 268
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRW----GVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
++ + C Q S + +L R++ W G N + L++ Y G+ A L
Sbjct: 269 MVTVV-SACAQ---SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
+ + +K +++N +I G + +EAL + + M G +P+ V+ +
Sbjct: 325 ERLPYKDV------------ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 379 VI 380
++
Sbjct: 373 IL 374
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 135/306 (44%), Gaps = 23/306 (7%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC-GKGR-MXXXXXXXX 146
T+ +++ Y + A+ + M + GL P+ +F ++ LC KGR +
Sbjct: 715 TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFR 774
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---- 202
M + PD + C+ G+ A+ L + GF +VA Y+ IR L
Sbjct: 775 EMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVA-YSIYIRALCRIG 833
Query: 203 RLEDAV---GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
+LE+A+ F G ER L D TY +++ L+ DL+KA + M G P
Sbjct: 834 KLEEALSELASFEG--ERSL-LDQYTYGSIVHGL--LQRGDLQKALDKVNSMKEIGTKPG 888
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
Y LI +++L + + ++M P+ TYT ++ Y G+ +A++
Sbjct: 889 VHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFR 948
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
M +G P F T Y+ I LC ++E+AL +L M + G++P +++ TV
Sbjct: 949 NMEERGTSPDFKT--------YSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTV 1000
Query: 380 ILGFCR 385
G R
Sbjct: 1001 FYGLNR 1006
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 10/268 (3%)
Query: 61 AGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKP 120
A +EK S++ +R E + E + L+ ++C ++ EA+ ++R + + +
Sbjct: 305 AKSEKVDVVQSIADDMVRICE--ISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCL 362
Query: 121 NLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVL 180
+ F +V+GLC RM M ++ L D Y +I + + KA +
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIVDIMKRRKL-DDSNVYGIIISGYLRQNDVSKALEQF 421
Query: 181 SEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL 236
+ SG P V+TY +++ L + E +F M E + PD V +++ L
Sbjct: 422 EVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAG--HL 479
Query: 237 KEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNE 296
+ + +A+++ + M KGI P +Y ++ LC R E +F +M + ++
Sbjct: 480 GQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDD 539
Query: 297 TYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
++ ++++ G+ K HL E+ +
Sbjct: 540 IFSWVISSMEKNGEKEK-IHLIKEIQKR 566
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 104/258 (40%), Gaps = 17/258 (6%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKG--HPGKARKVLSEMIDSGFSPS---VATY-NRLIRR 201
M L P T+ LI + C+K + +A + EMI SGF P V Y L
Sbjct: 739 MKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEV 798
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+DA + + P V Y+ I C++ + LE+A A + L D
Sbjct: 799 GNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGK--LEEALSELASFEGERSLLDQY 855
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
TY ++ L + L +A D M G P YT L+ + E Q K +M
Sbjct: 856 TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM 915
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+ PS VTY A+I G LG+ EEA R M E G SPD +Y I
Sbjct: 916 EGESC--------EPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFIN 967
Query: 382 GFCRIREPGKAYELKVEV 399
C+ + A +L E+
Sbjct: 968 CLCQACKSEDALKLLSEM 985
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 122/286 (42%), Gaps = 49/286 (17%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----R 203
M + D RT+T LI ++ GK V +M SGF YN +IR L R
Sbjct: 215 MEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGR 274
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLIS-------------------KFCKLKEPD---- 240
+ A+ ++ M E+ ++ + TY L+ + C++ E D
Sbjct: 275 GDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY 334
Query: 241 ----------LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
+++A E+ E+ +K + DA +E L++ LC R+ +A ++ M R
Sbjct: 335 LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK 394
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCL 350
+ +N Y +++ Y + SKA Q E+ K +G P TY I+ L
Sbjct: 395 LDDSN-VYGIIISGYLRQNDVSKALE-QFEVIKK-------SGRPPRVSTYTEIMQHLFK 445
Query: 351 LGRAEEALGVLRGMPEIGLSPDAVSYCTVI---LGFCRIREPGKAY 393
L + E+ + M E G+ PD+V+ V+ LG R+ E K +
Sbjct: 446 LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVF 491
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 147/347 (42%), Gaps = 33/347 (9%)
Query: 36 IRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVL 95
IR +T + ++ ++KK+G + + + G E ++ T YN ++
Sbjct: 224 IRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDA----------------TAYNIMIR 267
Query: 96 AYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAP 155
+ C R D A+ + M E+G+ L ++ ++ + ++ M +
Sbjct: 268 SLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEIS 327
Query: 156 DERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVF 211
+ + L+ FC G +A +++ E+ + + L++ L R+ DA+ +
Sbjct: 328 EHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV 387
Query: 212 RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLC 271
M R L D Y +IS + L++ D+ KA E + G P TY +++ L
Sbjct: 388 DIMKRRKLD-DSNVYGIIISGY--LRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLF 444
Query: 272 LQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFV 331
++ + +LF EM+ G+ P++ T ++ + + + ++A+ + M K
Sbjct: 445 KLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEK------- 497
Query: 332 TGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGM--PEIGLSPDAVSY 376
G P+ +Y+ + LC R +E + + M +I + D S+
Sbjct: 498 -GIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSW 543
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 35 IIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALV 94
I+ G G+LQ KV E+ GT+ GV Y +L+
Sbjct: 860 IVHGLLQRGDLQKALDKVNSMKEI---GTKPGVH--------------------VYTSLI 896
Query: 95 LAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLA 154
+ + ++++++ + + M +P+++++ A++ G G++ M ++ +
Sbjct: 897 VYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTS 956
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE 205
PD +TY+ I+ C A K+LSEM+D G +PS + + L E
Sbjct: 957 PDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNRE 1007
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 131/326 (40%), Gaps = 21/326 (6%)
Query: 70 NSVSGRRIREAEQVVDETTTYNALVLAY------CCDERVDEAMGILRCMTERGLKPNLI 123
+S + + +R ++V N ++A C R +A IL + KP+ +
Sbjct: 200 SSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFM 259
Query: 124 SFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM 183
++ + + G + + +AP Y + I +A++V +
Sbjct: 260 AYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVI 319
Query: 184 IDSGFSPSVATYNRLIRRLRLED---AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
+ F + LI + D AV M P + T + L C+ + D
Sbjct: 320 VSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSD 379
Query: 241 -LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT 299
L KA+E+ + KG + +Y +I LC R+ E+Y +EM + G++P+ Y
Sbjct: 380 HLIKAYEL---LSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYN 436
Query: 300 GLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALG 359
L+ A A L DEM FV G + TYN +I L G AEE+L
Sbjct: 437 ALIEACCKAEMIRPAKKLWDEM--------FVEGCKMNLTTYNVLIRKLSEEGEAEESLR 488
Query: 360 VLRGMPEIGLSPDAVSYCTVILGFCR 385
+ M E G+ PD Y ++I G C+
Sbjct: 489 LFDKMLERGIEPDETIYMSLIEGLCK 514
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 11/204 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T + L C ++ D + ++ +G L S++ ++ LC GR+ M
Sbjct: 364 TLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEM 423
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
++ LAPD Y +LI C A+K+ EM G ++ TYN LIR+L
Sbjct: 424 KKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEA 483
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK---AEMVHKGILPDAD 261
E+++ +F M ER + PD Y +LI C KE +E A E+ E HK +
Sbjct: 484 EESLRLFDKMLERGIEPDETIYMSLIEGLC--KETKIEAAMEVFRKCMERDHKTV--TRR 539
Query: 262 TYEPLIRTLCLQQRLSEAYDLFRE 285
+ LC EA L RE
Sbjct: 540 VLSEFVLNLCSNGHSGEASQLLRE 563
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 30/285 (10%)
Query: 25 LRNRLSPPN-----VIIRGFTAVGNLQ------SESKKVGGAFELLKAGTEKGVESNSVS 73
LRN P+ VI F GNL + +K+G A ++ + + +S
Sbjct: 249 LRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVA---PRSSDYRAFILDLIS 305
Query: 74 GRRIREAEQVVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS 124
+R+ EA++V + + +AL+ + + D A+ L M G P + +
Sbjct: 306 AKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDP-DSAVEFLVYMVSTGKLPAIRT 364
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
+ + + LC + ++ K + ++Y+ +I C G ++ L EM
Sbjct: 365 LSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMK 424
Query: 185 DSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD 240
G +P V+ YN LI + + A ++ M ++ TYN LI K + E +
Sbjct: 425 KEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE--EGE 482
Query: 241 LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFRE 285
E++ + +M+ +GI PD Y LI LC + ++ A ++FR+
Sbjct: 483 AEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 110/278 (39%), Gaps = 15/278 (5%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
Y + A+ + E +L+ + G+ P + A + L R+ +
Sbjct: 260 AYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVI 319
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDA- 207
D +LI P A + L M+ +G P++ T ++L + L D
Sbjct: 320 VSGKFPMDNDILDALIG-SVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKS 378
Query: 208 ---VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ + ++ + ++ +Y+ +IS CK + +++ EM +G+ PD Y
Sbjct: 379 DHLIKAYELLSSKGYFSELQSYSLMISFLCKAGR--VRESYTALQEMKKEGLAPDVSLYN 436
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
LI C + + A L+ EM G N TY L+ EG+ ++ L D+M +
Sbjct: 437 ALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLER 496
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
G P Y ++I GLC + E A+ V R
Sbjct: 497 --------GIEPDETIYMSLIEGLCKETKIEAAMEVFR 526
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 37/197 (18%)
Query: 81 EQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
E + + + YNAL+ A C E + A + M G K NL ++N +++ L +G
Sbjct: 426 EGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEE 485
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFC----------------DKGHPGKARKVLSEMI 184
M ++ + PDE Y SLI C ++ H R+VLSE +
Sbjct: 486 SLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFV 545
Query: 185 ----DSGFSPSVATYNRLIRRLR-----------LEDA----VGVFRGMTERDLSPDVV- 224
+G S + R L + DA +G+ +++SP +V
Sbjct: 546 LNLCSNGHSGEASQLLREREHLEHTGAHVVLLKCVADAKEVEIGIRHMQWIKEVSPSLVH 605
Query: 225 -TYNTLISKFCKLKEPD 240
+ L++ FC +PD
Sbjct: 606 TISSDLLASFCSSSDPD 622
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----- 202
M+Q+ L + TYT+LI G A+++ EM+ G P + TYN L+ L
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 203 --------RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
++ED +F ++ + + P+VVTY T+IS FCK + E+A+ + +M
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCK--KGFKEEAYTLFRKMKED 124
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
G LPD+ TY LIR + + +L +EM + + TY GL+ +G+ K
Sbjct: 125 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 183
Query: 315 F 315
F
Sbjct: 184 F 184
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 178 KVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
++ EM G + TY LI+ L + A +F+ M + PD++TYN L+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 234 CK-------LKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM 286
CK L +E +++ + KG+ P+ TY +I C + EAY LFR+M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 287 LRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
G P++ TY L+ A+ +G + + L EM
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY 305
E+ EM +G++ + TY LI+ L A ++F+EM+ GV P+ TY L++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 306 RIEGQFSKAFHL-QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGM 364
G+ KA + E F + G P+ VTY +I G C G EEA + R M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 365 PEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEV 399
E G PD+ +Y T+I R + + EL E+
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 77 IREAEQ--VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCG 134
RE Q +V T TY L+ D A I + M G+ P+++++N ++ GLC
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK 63
Query: 135 KGRMXXXXXXXXXMNQKDL---------APDERTYTSLIHLFCDKGHPGKARKVLSEMID 185
G++ + DL P+ TYT++I FC KG +A + +M +
Sbjct: 64 NGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKE 123
Query: 186 SGFSPSVATYNRLIR 200
G P TYN LIR
Sbjct: 124 DGPLPDSGTYNTLIR 138
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 281 DLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVT 340
+LFREM + G+ N TYT L+ G A + EM G P +T
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGV--------PPDIMT 53
Query: 341 YNAIIYGLCLLGRAEEAL---------GVLRGMPEIGLSPDAVSYCTVILGFCRIREPGK 391
YN ++ GLC G+ E+AL + + G+ P+ V+Y T+I GFC+ +
Sbjct: 54 YNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEE 113
Query: 392 AYELKVEVDEN 402
AY L ++ E+
Sbjct: 114 AYTLFRKMKED 124
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 80 AEQVVDETTTYNALVLAYCCDERVDEAM---------GILRCMTERGLKPNLISFNAVVQ 130
++ V + TYN L+ C + ++++A+ + ++ +G+KPN++++ ++
Sbjct: 44 SDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMIS 103
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
G C KG M + PD TY +LI G + +++ EM F+
Sbjct: 104 GFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAG 163
Query: 191 SVATY 195
+TY
Sbjct: 164 DASTY 168
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 15/236 (6%)
Query: 157 ERTYTSLIHLFCD-KGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL---RLEDAV-GVF 211
E + +L+ ++ + G +A ++L M D G PS ++N ++ L +L D + +F
Sbjct: 131 EEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIF 190
Query: 212 RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLC 271
+ + D N LI C+ +LE A ++ E + P+ T+ PLIR C
Sbjct: 191 VSAPKLGVEIDACCLNILIKGLCE--SGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFC 248
Query: 272 LQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFV 331
+ + EA+ L M + + P+ T+ L++ R +G+ + L + M V
Sbjct: 249 NKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMK--------V 300
Query: 332 TGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIR 387
G P+ TY ++YGL R EA ++ M G+ P +SY ++LG C +
Sbjct: 301 KGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETK 356
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
+ ++N ++ + DE I + G++ + N +++GLC G +
Sbjct: 167 SKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLD 226
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRL 202
Q+ P+ T++ LI FC+KG +A K+L M P T+N LI ++
Sbjct: 227 EFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKG 286
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
R+E+ + + M + P+ TY ++ K+ +LE A EM ++M+ G+ P +
Sbjct: 287 RVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLD-KKRNLE-AKEMMSQMISWGMRPSFLS 344
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
Y+ ++ LC + + E + R+M+ G P
Sbjct: 345 YKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNA 92
N++I+G GNL++ A +LL ++ N T++
Sbjct: 206 NILIKGLCESGNLEA-------ALQLLDEFPQQKSRPN----------------VMTFSP 242
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKD 152
L+ +C + +EA +L M + ++P+ I+FN ++ GL KGR+ M K
Sbjct: 243 LIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKG 302
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAV---- 208
P+ TY +++ DK +A++++S+MI G PS +Y +++ L +V
Sbjct: 303 CEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMD 362
Query: 209 GVFRGMTERDLSPDVVTYNTLIS 231
V R M P + + ++
Sbjct: 363 WVLRQMVNHGFVPKTLMWWKVVQ 385
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 20/238 (8%)
Query: 156 DERTYTSLIHLFCDKGHPGKARKVLSEMID------SGFSPSVATYNRLIRRL----RLE 205
D +Y IH F G A + EM + S F P + TYN LI L + +
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
DA+ V+ + PD TY LI CK ++ A + EM + G +PD Y
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYR--MDDAMRIYGEMQYNGFVPDTIVYNC 364
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
L+ ++++EA LF +M++ GV + TY L++ G+ F L ++ KG
Sbjct: 365 LLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKG 424
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
FV +T++ + LC G+ E A+ ++ M G S D V+ ++++GF
Sbjct: 425 ---QFVDA-----ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGF 474
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 6/147 (4%)
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGM 214
TY S++ F KG+ AR VL +M ++ + +ATYN +I+ L R + A V +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 215 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 274
T++ D+V YNTLI+ K L++A ++ M GI PD +Y +I
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATR--LDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAG 749
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGL 301
+L EAY + ML G PN+ T T L
Sbjct: 750 KLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 93/241 (38%), Gaps = 50/241 (20%)
Query: 188 FSPSVATYNRLIRRLRLEDAVGVFRGMTER-----DLSPDVVTYNTLISKF-CKLKEPDL 241
+ P N L+ LR D F+ + E+ D +YN I F C DL
Sbjct: 208 YLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGC---WGDL 264
Query: 242 EKAFEMKAEMVHKGIL------PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
+ A + EM + + PD TY LI LCL + +A ++ E+ G P+N
Sbjct: 265 DAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN 324
Query: 296 ETY----TGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT------------------- 332
TY G +YR++ A + EM + GF+P +
Sbjct: 325 STYRILIQGCCKSYRMD----DAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQ 380
Query: 333 --------GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G S TYN +I GL GRAE + + + G DA+++ V L C
Sbjct: 381 LFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLC 440
Query: 385 R 385
R
Sbjct: 441 R 441
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 6/143 (4%)
Query: 194 TYNRL----IRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKA 249
TYN + +++ + A GV M E + D+ TYN +I K+ DL A +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASA--VLD 689
Query: 250 EMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEG 309
+ +G D Y LI L RL EA LF M G++P+ +Y ++ G
Sbjct: 690 RLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAG 749
Query: 310 QFSKAFHLQDEMTHKGFLPGFVT 332
+ +A+ M G LP VT
Sbjct: 750 KLKEAYKYLKAMLDAGCLPNHVT 772
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 106/266 (39%), Gaps = 28/266 (10%)
Query: 159 TYTSLIHLFCDKGHPGKARKVLSEMIDSGF----SPSVATYNRLIRRLRLEDAVGVFRGM 214
Y+ + C G G+ +L M + G + + + LIR + E A+GV M
Sbjct: 94 AYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYM 153
Query: 215 TERD--LSPDVVTYNTLISKFCKLKEPDLEKAFEMK-------------AEMVHKGILPD 259
E L+P V Y++++ K E L + K ++ LP
Sbjct: 154 EELGDCLNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPG 211
Query: 260 ADTYEPLI---RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
L+ R ++ ++ + M R+ + +Y ++ + G A
Sbjct: 212 TVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKF--DTWSYNICIHGFGCWGDLDAALS 269
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
L EM + + G + F P TYN++I+ LCL G+A++AL V + G PD +Y
Sbjct: 270 LFKEMKERSSVYG--SSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTY 327
Query: 377 CTVILGFCRIREPGKAYELKVEVDEN 402
+I G C+ A + E+ N
Sbjct: 328 RILIQGCCKSYRMDDAMRIYGEMQYN 353
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 83 VVDETT-TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
V D T+ TYN+++ ++ A G+L M E ++ ++N ++QGL GR
Sbjct: 625 VTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLA 684
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI-- 199
+ ++ D Y +LI+ +A ++ M +G +P V +YN +I
Sbjct: 685 SAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEV 744
Query: 200 --RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV 252
+ +L++A + M + P+ VT +T++ K ++EKA KA V
Sbjct: 745 NSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTILDYLGK----EMEKARFKKASFV 794
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 16/297 (5%)
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
+++ AY +++A G+ E+G P ++ + +V L +G+ +K
Sbjct: 709 SMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEK 768
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDA 207
++ D Y +LI + G A ++ M SG S+ TYN +I R L+L+ A
Sbjct: 769 NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKA 828
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ +F L D Y +I + K + +A + +EM KGI P +Y ++
Sbjct: 829 IEIFSNARRSGLYLDEKIYTNMIMHYGK--GGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Query: 268 RTLCLQQRLSEAYD-LFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
+ +C RL D L + M R G + TY L+ Y QF++A + KG
Sbjct: 887 K-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKG- 944
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
+P SH +++++ L G EEA M E G+SPD+ T++ G+
Sbjct: 945 IP-------LSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGY 994
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 16/231 (6%)
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVAT----YNRLIRRLRLEDAVGV 210
P + S+I + G A + E + G P T N L R + +A +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 211 FRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTL 270
R E+++ D V YNTLI L+ L+ A E+ M G+ TY +I
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAM--LEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVY 819
Query: 271 CLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGF 330
+L +A ++F R G+ + + YT ++ Y G+ S+A L EM KG PG
Sbjct: 820 GRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPG- 878
Query: 331 VTGFSPSHVTYNAIIYGLCLLGR-AEEALGVLRGMPEIGLSPDAVSYCTVI 380
+PS YN ++ +C R E +L+ M G D +Y T+I
Sbjct: 879 ----TPS---YNMMV-KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLI 921
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 30/271 (11%)
Query: 188 FSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEK 243
+ PSV Y ++R +++ A F M E PD V T++ + +
Sbjct: 184 YRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAML 243
Query: 244 AFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMN 303
F + + IL Y ++ +L + + DL+ EM+ GV PN TYT +++
Sbjct: 244 TFYKAVQ--ERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVS 301
Query: 304 AYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRG 363
+Y +G +A EM GF+P VTY+++I G E+A+G+
Sbjct: 302 SYAKQGFKEEALKAFGEMKSLGFVP--------EEVTYSSVISLSVKAGDWEKAIGLYED 353
Query: 364 MPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDEN-----------MISWLGIWGL 412
M G+ P + T++ + + KA L +++ N +I G GL
Sbjct: 354 MRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGL 413
Query: 413 FEDTRKSL-----MQGLSNEDTFSSLMNDYL 438
F D + + L++E T+ ++ +L
Sbjct: 414 FHDAQSMFEETERLNLLADEKTYLAMSQVHL 444
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 149/376 (39%), Gaps = 35/376 (9%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYN 91
P+V++ +T V L + K+ A E E G E ++V+
Sbjct: 186 PSVVV--YTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVAC----------------G 227
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
++ Y R + + + ER + + +N ++ L K M ++
Sbjct: 228 TMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEE 287
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDA 207
+ P+E TYT ++ + +G +A K EM GF P TY+ +I + E A
Sbjct: 288 GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKA 347
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+G++ M + + P T T++S + K + + KA + A+M I D +I
Sbjct: 348 IGLYEDMRSQGIVPSNYTCATMLSLYYKTE--NYPKALSLFADMERNKIPADEVIRGLII 405
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
R +A +F E R + + +TY + + G KA + + M + +
Sbjct: 406 RIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRD-I 464
Query: 328 PGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIR 387
P + Y I C AEEA R + + GL PDA S ++ + R+
Sbjct: 465 PLSRFAYIVMLQCYAKIQNVDC----AEEA---FRALSKTGL-PDASSCNDMLNLYTRLN 516
Query: 388 --EPGKAYELKVEVDE 401
E K + ++ VD+
Sbjct: 517 LGEKAKGFIKQIMVDQ 532
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 119/292 (40%), Gaps = 29/292 (9%)
Query: 55 AFELLKAGTEKGVES---------NSVSGR-RIREAEQVVD---------ETTTYNALVL 95
A+ L EKG + N+++ R + REAE + +T YN L+
Sbjct: 723 AYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIK 782
Query: 96 AYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG-RMXXXXXXXXXMNQKDLA 154
A ++ A I M G+ ++ ++N ++ + G+G ++ + L
Sbjct: 783 AMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMI-SVYGRGLQLDKAIEIFSNARRSGLY 841
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR---RLRLEDAVG-V 210
DE+ YT++I + G +A + SEM G P +YN +++ RL V +
Sbjct: 842 LDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDEL 901
Query: 211 FRGMTERDLSPDVVTYNTLISKFCKLKE-PDLEKAFEMKAEMVHKGILPDADTYEPLIRT 269
+ M D+ TY TLI + + + + EK + E KGI + L+
Sbjct: 902 LQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKE---KGIPLSHSHFSSLLSA 958
Query: 270 LCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
L + EA + +M G+SP++ ++ Y G K ++M
Sbjct: 959 LVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKM 1010
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGH 172
M +RGL P + +N++V L + +N++ L PD TY S+I C+ G
Sbjct: 320 MKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGK 379
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISK 232
AR VL+ MI SP+V T++ + + E + V M DL P T+ ++ K
Sbjct: 380 LDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGK 439
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
K K+P E A ++ AEM I+ + Y I+ L L +A +++ EM G
Sbjct: 440 LFKGKQP--ENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFV 497
Query: 293 PNNETYTGLMNAYRIEG-QFSKAFHLQDEMTHKGF 326
N L+ +++G + SK +LQ + +G+
Sbjct: 498 -GNPMLQKLLEEQKVKGVRKSKRMNLQKVGSQEGY 531
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 11/243 (4%)
Query: 90 YNALVLAYC-CDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+N ++ +C V EA I R M + PN S++ ++ G + M
Sbjct: 261 FNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEM 320
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
++ LAP Y SL+++ + +A K++ ++ + G P TYN +IR L +L
Sbjct: 321 KKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKL 380
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ A V M +LSP V T++ L+ + EK E+ +M + P +T+
Sbjct: 381 DVARNVLATMISENLSPTVDTFHAF------LEAVNFEKTLEVLGQMKISDLGPTEETFL 434
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
++ L ++ A ++ EM R+ + N Y + G KA + EM K
Sbjct: 435 LILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSK 494
Query: 325 GFL 327
GF+
Sbjct: 495 GFV 497
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 17/187 (9%)
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP-DADTYEP 265
A+ F M + +P + L+ C+ +EKA E + K + P D + +
Sbjct: 208 AIRTFDIMDKFKHTPYDEAFQGLLCALCR--HGHIEKAEEFM--LASKKLFPVDVEGFNV 263
Query: 266 LIRTLC-LQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
++ C + ++EA ++REM + ++PN ++Y+ +++ + G + L DEM +
Sbjct: 264 ILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKR 323
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
G PG YN+++Y L +EA+ +++ + E GL PD+V+Y ++I C
Sbjct: 324 GLAPGIEV--------YNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLC 375
Query: 385 RIREPGK 391
E GK
Sbjct: 376 ---EAGK 379
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 214 MTERDLSP-DVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCL 272
+ + L P DV +N +++ +C + D+ +A + EM + I P+ D+Y +I
Sbjct: 248 LASKKLFPVDVEGFNVILNGWCNI-WTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSK 306
Query: 273 QQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT 332
L ++ L+ EM + G++P E Y L+ E F +A L ++ +
Sbjct: 307 VGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEE-------- 358
Query: 333 GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
G P VTYN++I LC G+ + A VL M LSP ++
Sbjct: 359 GLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTF 402
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 134/315 (42%), Gaps = 47/315 (14%)
Query: 93 LVLAYCCDERV-DEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
+VL C + DEA+ +LR E + + +++N V++ KG + M+
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVF 211
L PD TYTS+I+ +C+ G +++DA +
Sbjct: 195 GLYPDVITYTSMINGYCNAG-------------------------------KIDDAWRLA 223
Query: 212 RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG----ILPDADTYEPLI 267
+ M++ D + VTY+ ++ C K D+E+A E+ AEM + I P+A TY +I
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVC--KSGDMERALELLAEMEKEDGGGLISPNAVTYTLVI 281
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAF-HLQDEMTHKGF 326
+ C ++R+ EA + M G PN T L+ + KA L D++ G
Sbjct: 282 QAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG- 340
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
G S S +A + L + R EEA + R M G+ PD ++ V C +
Sbjct: 341 ------GVSLSECFSSATV-SLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLL 393
Query: 387 REPGKAYELKVEVDE 401
+ L E+++
Sbjct: 394 ERYLDCFLLYQEIEK 408
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 133/291 (45%), Gaps = 15/291 (5%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
V +T YN ++ + ++ A +++ M GL P++I++ +++ G C G++
Sbjct: 160 NVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDA 219
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM--IDSG--FSPSVATYNR 197
M++ D + TY+ ++ C G +A ++L+EM D G SP+ TY
Sbjct: 220 WRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTL 279
Query: 198 LIR----RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH 253
+I+ + R+E+A+ V M R P+ VT LI + + D++ ++ ++V
Sbjct: 280 VIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLE-NDEDVKALSKLIDKLVK 338
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK 313
G + ++ + +L +R EA +FR ML GV P+ + + + ++
Sbjct: 339 LGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLD 398
Query: 314 AFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGM 364
F L E+ K V S + + ++ GLC G + EA + + M
Sbjct: 399 CFLLYQEIEKKD-----VKSTIDSDI-HAVLLLGLCQQGNSWEAAKLAKSM 443
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 141/333 (42%), Gaps = 36/333 (10%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCM----TERGLKPNLISFNAVVQGLCGKGRMXXXXXX 144
+Y L+ +C + +++EA +L M +++G +++ + ++ LC G +
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPG--KARKVLSEMIDSGFSPSVATYNRLIRRL 202
+ +K L +R Y + + G + +++L+E + G P + +Y+ + L
Sbjct: 249 LGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFC---KLKEPDLEKAFEMKAEMVHKG 255
+L + V M + P Y + C KLKE + EM+
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA----VSVINKEMMQGH 364
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW-GVSPNNETYTGLMNAYRIEGQFSKA 314
LP Y LI+ LC + EA ++M + N ETY L++ +GQF +A
Sbjct: 365 CLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEA 424
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ +EM K PG TY+ +I GLC + R EA+ L M + P++
Sbjct: 425 SQVMEEMLIKSHFPGV--------ETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESS 476
Query: 375 SYCTVI--LGFCRIREPGKAYELKVEVDENMIS 405
+ + + FC I VE+ E++IS
Sbjct: 477 VWKALAESVCFCAID--------VVEILEHLIS 501
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 16/273 (5%)
Query: 122 LISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLS 181
+ + N +++ LC R MN + PD +Y L+ FC +G +A +L
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 182 EMI----DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
M G + Y L+ L ++DA+ + + + L Y+ + +
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH 271
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
+ +E+ + E + +G +P D+Y + L + +L E ++ M G P
Sbjct: 272 WESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEP 331
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
Y + A G+ +A + ++ +G P+ YN +I GLC G+
Sbjct: 332 TPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCL-------PTVGVYNVLIKGLCDDGK 384
Query: 354 AEEALGVLRGMP-EIGLSPDAVSYCTVILGFCR 385
+ EA+G L+ M ++ + +Y T++ G CR
Sbjct: 385 SMEAVGYLKKMSKQVSCVANEETYQTLVDGLCR 417
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 136/341 (39%), Gaps = 21/341 (6%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
+V T N L+ C R D A + + M +G P+ S+ +++G C +G++
Sbjct: 147 EVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEA 206
Query: 142 XXXXXXM----NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNR 197
M +QK D Y L+ CD G A ++L +++ G Y+
Sbjct: 207 THLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHH 266
Query: 198 LIRRLRLEDAVG---VFRGMTE---RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM 251
+ + G V R +TE R P + +Y+ + + +E L + E+ M
Sbjct: 267 IEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL--FEEGKLVEGEEVLLAM 324
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLF-REMLRWGVSPNNETYTGLMNAYRIEGQ 310
KG P Y ++ LC +L EA + +EM++ P Y L+ +G+
Sbjct: 325 RSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGK 384
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
+A +M+ + + TY ++ GLC G+ EA V+ M
Sbjct: 385 SMEAVGYLKKMSKQ-------VSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHF 437
Query: 371 PDAVSYCTVILGFCRI-REPGKAYELKVEVDENMISWLGIW 410
P +Y +I G C + R L+ V ++M+ +W
Sbjct: 438 PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVW 478
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 182 EMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
E DS F+ + T++R RLEDA+ +F+ + E + ++++TL+ + +KE +L
Sbjct: 78 ECKDSVFASVIRTFSR---AGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEM--VKESEL 132
Query: 242 EKAFEMKAEMVHKGILPDADT-YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
E A + + + + T L++ LC R A +F+EM G P+ ++Y
Sbjct: 133 EAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRI 192
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
LM + +EG+ +A HL M F G V Y ++ LC G ++A+ +
Sbjct: 193 LMKGFCLEGKLEEATHLLYSM----FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 361 LRGMPEIGLSPDAVSY 376
L + GL Y
Sbjct: 249 LGKILRKGLKAPKRCY 264
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 141/333 (42%), Gaps = 36/333 (10%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCM----TERGLKPNLISFNAVVQGLCGKGRMXXXXXX 144
+Y L+ +C + +++EA +L M +++G +++ + ++ LC G +
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPG--KARKVLSEMIDSGFSPSVATYNRLIRRL 202
+ +K L +R Y + + G + +++L+E + G P + +Y+ + L
Sbjct: 249 LGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFC---KLKEPDLEKAFEMKAEMVHKG 255
+L + V M + P Y + C KLKE + EM+
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA----VSVINKEMMQGH 364
Query: 256 ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW-GVSPNNETYTGLMNAYRIEGQFSKA 314
LP Y LI+ LC + EA ++M + N ETY L++ +GQF +A
Sbjct: 365 CLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEA 424
Query: 315 FHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAV 374
+ +EM K PG TY+ +I GLC + R EA+ L M + P++
Sbjct: 425 SQVMEEMLIKSHFPGV--------ETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESS 476
Query: 375 SYCTVI--LGFCRIREPGKAYELKVEVDENMIS 405
+ + + FC I VE+ E++IS
Sbjct: 477 VWKALAESVCFCAID--------VVEILEHLIS 501
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 16/273 (5%)
Query: 122 LISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLS 181
+ + N +++ LC R MN + PD +Y L+ FC +G +A +L
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 182 EMI----DSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
M G + Y L+ L ++DA+ + + + L Y+ + +
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH 271
Query: 234 CKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
+ +E+ + E + +G +P D+Y + L + +L E ++ M G P
Sbjct: 272 WESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEP 331
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGR 353
Y + A G+ +A + ++ +G P+ YN +I GLC G+
Sbjct: 332 TPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCL-------PTVGVYNVLIKGLCDDGK 384
Query: 354 AEEALGVLRGMP-EIGLSPDAVSYCTVILGFCR 385
+ EA+G L+ M ++ + +Y T++ G CR
Sbjct: 385 SMEAVGYLKKMSKQVSCVANEETYQTLVDGLCR 417
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 136/341 (39%), Gaps = 21/341 (6%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
+V T N L+ C R D A + + M +G P+ S+ +++G C +G++
Sbjct: 147 EVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEA 206
Query: 142 XXXXXXM----NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNR 197
M +QK D Y L+ CD G A ++L +++ G Y+
Sbjct: 207 THLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHH 266
Query: 198 LIRRLRLEDAVG---VFRGMTE---RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM 251
+ + G V R +TE R P + +Y+ + + +E L + E+ M
Sbjct: 267 IEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL--FEEGKLVEGEEVLLAM 324
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLF-REMLRWGVSPNNETYTGLMNAYRIEGQ 310
KG P Y ++ LC +L EA + +EM++ P Y L+ +G+
Sbjct: 325 RSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGK 384
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
+A +M+ + + TY ++ GLC G+ EA V+ M
Sbjct: 385 SMEAVGYLKKMSKQ-------VSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHF 437
Query: 371 PDAVSYCTVILGFCRI-REPGKAYELKVEVDENMISWLGIW 410
P +Y +I G C + R L+ V ++M+ +W
Sbjct: 438 PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVW 478
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 182 EMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
E DS F+ + T++R RLEDA+ +F+ + E + ++++TL+ + +KE +L
Sbjct: 78 ECKDSVFASVIRTFSR---AGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEM--VKESEL 132
Query: 242 EKAFEMKAEMVHKGILPDADT-YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
E A + + + + T L++ LC R A +F+EM G P+ ++Y
Sbjct: 133 EAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRI 192
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
LM + +EG+ +A HL M F G V Y ++ LC G ++A+ +
Sbjct: 193 LMKGFCLEGKLEEATHLLYSM----FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 361 LRGMPEIGLSPDAVSY 376
L + GL Y
Sbjct: 249 LGKILRKGLKAPKRCY 264
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 7/244 (2%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTER-GLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
TT+N++++++ + + I R M E G PN+ S+N +++ C +G M
Sbjct: 245 ATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVW 304
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RR 201
M + + D Y ++I C KA+++ +M G + TY L+ +
Sbjct: 305 EEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKA 364
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD--LEKAFEMKAEMVHKGILPD 259
++ + V+R M + D +T L+ C ++ +E A +K + P
Sbjct: 365 GDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPS 424
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
+ YE L++ LC ++ A ++ EM+ G P+ ETY ++ Y I G + L
Sbjct: 425 RNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAI 484
Query: 320 EMTH 323
EM
Sbjct: 485 EMAE 488
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 142/333 (42%), Gaps = 31/333 (9%)
Query: 93 LVLAYCCDER-VDEAMGILRCMTERGLKPNLISFNAVV------QGLCGKGRMXXXXXXX 145
L++ C D + +D A+ ++R + RG+ + + NA++ +G +M
Sbjct: 167 LLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGL 226
Query: 146 XXMNQKD-------LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS-GFSPSVATYNR 197
++ + + P+ T+ S++ F +G ++ EM + G SP+V +YN
Sbjct: 227 DDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNV 286
Query: 198 LIR----RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH 253
L+ R + +A V+ M R + D+V YNT+I C E + KA E+ +M
Sbjct: 287 LMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFE--VVKAKELFRDMGL 344
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY---RIEGQ 310
KGI TYE L+ C + ++REM R G + T L+ R +
Sbjct: 345 KGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQR 404
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
+A + + + F PS Y ++ LC G+ + AL + M G
Sbjct: 405 VVEAADIVKDAVREAM-------FYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFK 457
Query: 371 PDAVSYCTVILGFCRIREPGKAYELKVEVDENM 403
P +Y I G+ + + + L +E+ E++
Sbjct: 458 PSQETYRAFIDGYGIVGDEETSALLAIEMAESL 490
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 29/210 (13%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
L++A +G+ S + + VV + YN ++ C + V +A + R M +G
Sbjct: 287 LMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKG 346
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKAR 177
++ +++ +V G C G + M +K D T +L+ CD
Sbjct: 347 IECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCD-------- 398
Query: 178 KVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLK 237
+R +R+ +E A V + E P Y L+ + C +
Sbjct: 399 ------------------DRDGQRV-VEAADIVKDAVREAMFYPSRNCYELLVKRLC--E 437
Query: 238 EPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
+ +++A ++AEMV KG P +TY I
Sbjct: 438 DGKMDRALNIQAEMVGKGFKPSQETYRAFI 467
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 66/116 (56%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T TYN+++ +C +RVD+A +L M +G P++++F+ ++ G C R+
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M+++ + + TYT+LIH FC G A+ +L+EMI G +P T++ ++ L
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 221 PDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAY 280
P +TYN++I FCK + ++ A M M KG PD T+ LI C +R+
Sbjct: 8 PTTITYNSMIDGFCK--QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 281 DLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVT 340
++F EM R G+ N TYT L++ + G A L +EM G +P ++T
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM--------ISCGVAPDYIT 117
Query: 341 YNAIIYGLCLLGRAEEALGVLRGMPE 366
++ ++ GLC +A +L + +
Sbjct: 118 FHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 251 MVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQ 310
M+ I P TY +I C Q R+ +A + M G SP+ T++ L+N Y +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
+ EM +G + + VTY +I+G C +G + A +L M G++
Sbjct: 61 VDNGMEIFCEMHRRGIVA--------NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
Query: 371 PDAVSYCTVILGFCRIREPGKAYEL 395
PD +++ ++ G C +E KA+ +
Sbjct: 113 PDYITFHCMLAGLCSKKELRKAFAI 137
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 33/176 (18%)
Query: 113 MTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGH 172
M + P I++N+++ G C + R+ M K +PD T+++LI+ +C
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYC---- 56
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISK 232
KA++V ++ + +F M R + + VTY TLI
Sbjct: 57 --KAKRV-------------------------DNGMEIFCEMHRRGIVANTVTYTTLIHG 89
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
FC++ DL+ A ++ EM+ G+ PD T+ ++ LC ++ L +A+ + ++ +
Sbjct: 90 FCQV--GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 76 RIREAEQVVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
R+ +A++++D + T++ L+ YC +RVD M I M RG+ N +++
Sbjct: 25 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 84
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM 183
++ G C G + M +APD T+ ++ C K KA +L ++
Sbjct: 85 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 336 PSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
P+ +TYN++I G C R ++A +L M G SPD V++ T+I G+C+ + E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 396 KVEV 399
E+
Sbjct: 68 FCEM 71
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 12/263 (4%)
Query: 75 RRIREAEQVVD--------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
R ++EA + + + T N L+L + V M +RG KPN +++
Sbjct: 190 REMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYG 249
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
+ G C K M++ D + T+LIH + KAR++ E+
Sbjct: 250 IRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKR 309
Query: 187 GFSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
G +P YN L+ L + A+ V + M E+ + PD VT++++ K KE
Sbjct: 310 GLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFN 369
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
E +M + ++P T L++ C ++ DL++ ML G P+ L
Sbjct: 370 GVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLT 429
Query: 303 NAYRIEGQFSKAFHLQDEMTHKG 325
A + + AF + +G
Sbjct: 430 TALCARRRANDAFECSWQTVERG 452
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 26/248 (10%)
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVL-------SEMIDSGFSPSVATYNRLIRRL----R 203
P+ ++ S+ L C G + L E+ F V +N L+R
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFG--VDEFNILLRAFCTERE 191
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM-KAEMVHKGILPDADT 262
+++A +F + R +PDV T N L+ F KE A E+ EMV +G P++ T
Sbjct: 192 MKEARSIFEKLHSR-FNPDVKTMNILLLGF---KEAGDVTATELFYHEMVKRGFKPNSVT 247
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
Y I C ++ EA LF +M R + T L++ + KA L DE++
Sbjct: 248 YGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEIS 307
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
+G +P YNA++ L G A+ V++ M E G+ PD+V++ ++ +G
Sbjct: 308 KRGL--------TPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIG 359
Query: 383 FCRIREPG 390
+ +E G
Sbjct: 360 MMKSKEFG 367
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 17/210 (8%)
Query: 197 RLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLK-----EPDLEKAFEMKAEM 251
++ R+R D +D P+++++ ++ CK+ E LE +M+ E+
Sbjct: 111 HILARMRYFDQAWALMAEVRKDY-PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEI 169
Query: 252 VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
K D + L+R C ++ + EA +F E L +P+ +T L+ ++ G
Sbjct: 170 FRKKF--GVDEFNILLRAFCTEREMKEARSIF-EKLHSRFNPDVKTMNILLLGFKEAGDV 226
Query: 312 SKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSP 371
+ EM +GF P+ VTY I G C EAL + M +
Sbjct: 227 TATELFYHEMVKRGF--------KPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDI 278
Query: 372 DAVSYCTVILGFCRIREPGKAYELKVEVDE 401
T+I G R KA +L E+ +
Sbjct: 279 TVQILTTLIHGSGVARNKIKARQLFDEISK 308
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 18/276 (6%)
Query: 72 VSGRRIREAEQVVDETTTYN---------ALVLAYCCDERVDEAMGILRCMTERGLKPNL 122
V+ +R+ E++++E Y ++ Y + A + M R K ++
Sbjct: 85 VAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSV 144
Query: 123 ISFNAVVQGLCGKGRMXXXXXXXXXMNQK-DLAPDERTYTSLIHLFCDKGHPGKARKVLS 181
+SFNA++ + + K + PD +Y +LI C+K +A +L
Sbjct: 145 LSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLD 204
Query: 182 EMIDSGFSPSVATYNRLIR----RLRLEDAVGVFRGMTERDLSPDVVTYNT-LISKFCKL 236
E+ + G P + T+N L+ + + E ++ M E++++ D+ TYN L+ +
Sbjct: 205 EIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEA 264
Query: 237 KEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNE 296
K +L F E+ G+ PD ++ +IR + ++ EA ++E+++ G P+
Sbjct: 265 KSKELVNLF---GELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKA 321
Query: 297 TYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT 332
T+ L+ A G F A L E K +L G T
Sbjct: 322 TFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTT 357
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ +YN L+ A C + + EA+ +L + +GLKP++++FN ++ KG+
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----R 201
M +K++A D RTY + + ++ + + E+ SG P V ++N +IR
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
++++A ++ + + PD T+ L+ C K D E A E+ E K L
Sbjct: 299 GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMC--KAGDFESAIELFKETFSKRYLVGQT 356
Query: 262 TYEPLIRTLCLQQRLSEAYDLFR 284
T + L+ L + EA ++ +
Sbjct: 357 TLQQLVDELVKGSKREEAEEIVK 379
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 123/289 (42%), Gaps = 16/289 (5%)
Query: 112 CMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKG 171
C +ER + N+ ++ V+ L R+ + E +I L+ G
Sbjct: 65 CESER-FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAG 123
Query: 172 HPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTER-----DLSPDVVTY 226
A+KV EM + SV ++N L+ RL V + + PD+V+Y
Sbjct: 124 MFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSY 183
Query: 227 NTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREM 286
NTLI C+ + L +A + E+ +KG+ PD T+ L+ + L+ + +++ +M
Sbjct: 184 NTLIKALCE--KDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKM 241
Query: 287 LRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIY 346
+ V+ + TY + E + + +L E+ +G P ++NA+I
Sbjct: 242 VEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELK--------ASGLKPDVFSFNAMIR 293
Query: 347 GLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
G G+ +EA + + + G PD ++ ++ C+ + A EL
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIEL 342
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 12/154 (7%)
Query: 49 SKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMG 108
S + G FEL + K VE N V + TYNA +L + + E +
Sbjct: 224 SSYLKGQFELGEEIWAKMVEKN------------VAIDIRTYNARLLGLANEAKSKELVN 271
Query: 109 ILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFC 168
+ + GLKP++ SFNA+++G +G+M + + PD+ T+ L+ C
Sbjct: 272 LFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMC 331
Query: 169 DKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
G A ++ E + T +L+ L
Sbjct: 332 KAGDFESAIELFKETFSKRYLVGQTTLQQLVDEL 365
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 7/219 (3%)
Query: 114 TERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHP 173
++ G+ + +SFN ++ C G + M + L PD TYT+LI
Sbjct: 169 SKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERC 228
Query: 174 GKARKVLSEMIDSGFSPSVATYNR----LIRRLRLEDAVGVFRGMTERDLSPDVVTYNTL 229
+ + M+ G P++ T+N L+ R R DA + M + + PD +TYN +
Sbjct: 229 VIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMV 288
Query: 230 ISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW 289
I F + PD+ A + M KG P+ Y+ +I LC AY + ++ +R
Sbjct: 289 IKGFFLARFPDM--AERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRK 346
Query: 290 GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
PN +T L+ +GQ +A + E+ H+ P
Sbjct: 347 KWYPNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPP 384
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 128/313 (40%), Gaps = 53/313 (16%)
Query: 114 TERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHP 173
T R + N +F V L G GR+ +QK L P R ++ + G
Sbjct: 63 TNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLE--HQKTL-PQGRREGFIVRIIMLYGKA 119
Query: 174 GKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
G ++ L D+ F+ D G R + + + V+++N
Sbjct: 120 GMTKQAL----DTFFN---------------MDLYGCKRSVKSFNAALQVLSFN------ 154
Query: 234 CKLKEPDLEKAFEMKAEMVHK-GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
PDL +E + K GI DA ++ I++ C L AY REM + G++
Sbjct: 155 -----PDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLT 209
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
P+ TYT L++A + L + M KG P+ T+N I L
Sbjct: 210 PDVVTYTTLISALYKHERCVIGNGLWNLMVLKGC--------KPNLTTFNVRIQFLVNRR 261
Query: 353 RAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREP-----------GKAYELKVEVDE 401
RA +A +L MP++ + PD+++Y VI GF R P GK Y+ +++ +
Sbjct: 262 RAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQ 321
Query: 402 NMISWLGIWGLFE 414
MI +L G F+
Sbjct: 322 TMIHYLCKAGNFD 334
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 7/204 (3%)
Query: 59 LKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGL 118
+K+ E G+ + R E + + TY L+ A ER G+ M +G
Sbjct: 184 IKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGC 243
Query: 119 KPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARK 178
KPNL +FN +Q L + R M + + PD TY +I F P A +
Sbjct: 244 KPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAER 303
Query: 179 VLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFC 234
V + M G+ P++ Y +I L + A + + + P++ T L+
Sbjct: 304 VYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLV 363
Query: 235 KLKEPDLEKAFEMKAEMVHKGILP 258
K + D K+ E+VH+ + P
Sbjct: 364 KKGQLDQAKSI---MELVHRRVPP 384
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 95/245 (38%), Gaps = 7/245 (2%)
Query: 93 LVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK- 151
+++ Y +A+ M G K ++ SFNA +Q L + K
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKY 171
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDA 207
+ D ++ I FC+ G A + EM SG +P V TY LI L R
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
G++ M + P++ T+N I + A ++ M + PD+ TY +I
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRA--WDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
+ L + A ++ M G PN + Y +++ G F A+ + + K +
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 328 PGFVT 332
P T
Sbjct: 350 PNLDT 354
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 149/367 (40%), Gaps = 58/367 (15%)
Query: 68 ESNSVSGRRI-------REAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKP 120
ES +SG+ + + E++ T+ +L++A D R +A G+ + E G K
Sbjct: 165 ESPGISGKNLIRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKE 224
Query: 121 -----NLISFNAVVQGLCGK-GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
NL N ++ L GK G+ + P+ +TY + C +
Sbjct: 225 SCGVLNLEILNELI-ALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMD 283
Query: 175 KARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFR--GMTERDLSPDVVTYNT 228
A V +M+ SG +I + + E+A V+ E+ L P V T
Sbjct: 284 WACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--T 341
Query: 229 LISKFCKLKEPDLEKAFEM----KAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFR 284
LI+ CK + + A EM E +GI P +D +I +LC + + +A L
Sbjct: 342 LITALCK-NDGTITFAQEMLGDLSGEARRRGIKPFSD----VIHSLCRMRNVKDAKALLL 396
Query: 285 EMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG------FVTGFSP-- 336
+M+ G +P N + +++A G +A + M +G P ++G++
Sbjct: 397 DMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGG 456
Query: 337 -------------------SHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
S VTY+A+I G C + +EAL +L M G+ P+A Y
Sbjct: 457 MMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYN 516
Query: 378 TVILGFC 384
+I FC
Sbjct: 517 KLIQSFC 523
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 116 RGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGK 175
RG+KP F+ V+ LC + M K AP + ++H G +
Sbjct: 370 RGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDE 425
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A++VL M G P V TY +I +++A + ++ VTY+ LI
Sbjct: 426 AKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIR 485
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ-RLSEAYDLFREMLRWG 290
+CK++E D +A ++ EM G+ P+AD Y LI++ CL+ +A LF EM + G
Sbjct: 486 GYCKIEEYD--EALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKG 543
Query: 291 VSPNNETYTGLMNAYR 306
+ N GL+ A +
Sbjct: 544 LHL-NAISQGLIRAVK 558
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
+N +V A +DEA +L+ M RGLKP++ ++ ++ G G M
Sbjct: 408 AVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAE 467
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI-----RRL 202
+K TY +LI +C +A K+L+EM G P+ YN+LI + L
Sbjct: 468 AKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKAL 527
Query: 203 RLEDAVGVFRGMTERDLSPDVVT 225
E A +F M ++ L + ++
Sbjct: 528 DWEKAEVLFEEMKQKGLHLNAIS 550
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 120/295 (40%), Gaps = 48/295 (16%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ +++A++ +Y + DEA+ + R M +KPN ++ +V+QG G
Sbjct: 365 DVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIH 424
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE 205
+ D+ + T T++I ++ G FSP++ + RL +
Sbjct: 425 CYAIKADIESELETATAVISMYAKCGR---------------FSPALKAFERLPIK---- 465
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
D V +N L + ++ D KAF++ M G+ PD+ T
Sbjct: 466 ----------------DAVAFNALAQGYTQI--GDANKAFDVYKNMKLHGVCPDSRTMVG 507
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+++T + ++ ++++ G L+N + + A L D+
Sbjct: 508 MLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDK----- 562
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
GF S V++N ++ G L G+AEEA+ R M P+AV++ ++
Sbjct: 563 ------CGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIV 611
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 120/315 (38%), Gaps = 33/315 (10%)
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIH--LFCDKGH 172
ER + ++FNA+ QG G M + PD RT ++ FC
Sbjct: 460 ERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYA 519
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTER-DLSPDVVTYNTLIS 231
G V ++I GF + LI DA+ + ++ V++N +++
Sbjct: 520 RGSC--VYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMN 577
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
+ L E+A +M + P+A T+ ++R L + +++ G
Sbjct: 578 GY--LLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGF 635
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
L++ Y G + E+++K V++N ++
Sbjct: 636 CSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYI------------VSWNTMLSAYAAH 683
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR-----------IREPGKAYELKVEVD 400
G A A+ + M E L PD+VS+ +V L CR E G+ ++++ EV+
Sbjct: 684 GLASCAVSLFLSMQENELKPDSVSFLSV-LSACRHAGLVEEGKRIFEEMGERHKIEAEVE 742
Query: 401 EN--MISWLGIWGLF 413
M+ LG GLF
Sbjct: 743 HYACMVDLLGKAGLF 757
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 103/247 (41%), Gaps = 6/247 (2%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
++ +YN ++ + V+E +L+ M E G P+ +S++ +++GL GR+
Sbjct: 254 DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIF 313
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
+ K PD Y ++I F ++ + M+D P++ TY++L+ L
Sbjct: 314 DNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG 373
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
++ DA+ +F M R + P + + C P K+ G
Sbjct: 374 RKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSR--KAGCRISES 431
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
Y+ L++ L + +++ EM G + E Y +++ I G A + +E
Sbjct: 432 AYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEA 491
Query: 322 THKGFLP 328
KGF P
Sbjct: 492 MRKGFCP 498
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 116/289 (40%), Gaps = 32/289 (11%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS--------GR--RIREAEQ 82
N++I G++ +G ++ K +LK E G + +S GR RI ++ +
Sbjct: 259 NIMISGWSKLGEVEEMEK-------VLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVE 311
Query: 83 VVD---------ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLC 133
+ D + YNA++ + DE+M R M + +PNL +++ +V GL
Sbjct: 312 IFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLI 371
Query: 134 GKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVA 193
++ M + + P TS + C G P A + + +G S +
Sbjct: 372 KGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISES 431
Query: 194 TYNRLIRRLRLEDAVG----VFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKA 249
Y L++RL G V+ M E DV Y ++ C + LE A +
Sbjct: 432 AYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGH--LENAVLVME 489
Query: 250 EMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETY 298
E + KG P+ Y L L + AY LF ++ + + N ++
Sbjct: 490 EAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 125/339 (36%), Gaps = 71/339 (20%)
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
E G+ ++ S++ +++ L + M + + PD T + F +
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVR 203
Query: 175 KARKVLSEMIDSGFSPSVATYNRLIR----RLRLEDAVGVFRGMTERDLSPDVVTYNTLI 230
+A ++ E G S ++N L+R R + A VF + ++ D +YN +I
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA-KKGNIPFDSCSYNIMI 262
Query: 231 SKFCKLKE-PDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLF------ 283
S + KL E ++EK + EMV G PD +Y LI L R++++ ++F
Sbjct: 263 SGWSKLGEVEEMEKVLK---EMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK 319
Query: 284 -----------------------------REMLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
R ML PN ETY+ L++ + S A
Sbjct: 320 GNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDA 379
Query: 315 FHLQDEMTHKGFLP--GFVTGF-------SPSHV------------------TYNAIIYG 347
+ +EM +G LP G VT F P H Y ++
Sbjct: 380 LEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKR 439
Query: 348 LCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
L G+ L V M E G D Y ++ G C I
Sbjct: 440 LSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCII 478
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 15/206 (7%)
Query: 187 GFSPSVATYNRLIR----RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
G + V +Y+ ++R R + V +GM ++PD+ + F ++ +
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY--VR 203
Query: 243 KAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM 302
+A E+ E G+ +++ L+R LC + +S A +F + + ++ +Y ++
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK-KGNIPFDSCSYNIMI 262
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
+ + G+ + + EM +GF P ++Y+ +I GL GR +++ +
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVE--------SGFGPDCLSYSHLIEGLGRTGRINDSVEIFD 314
Query: 363 GMPEIGLSPDAVSYCTVILGFCRIRE 388
+ G PDA Y +I F R+
Sbjct: 315 NIKHKGNVPDANVYNAMICNFISARD 340
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 144/333 (43%), Gaps = 15/333 (4%)
Query: 94 VLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDL 153
+L + ++EA R +P + + N V+ + + +NQ +
Sbjct: 102 ILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGI 161
Query: 154 APDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG-FSPSVATYNRLIRRL----RLEDAV 208
AP+ TY + + D P A + ID+ +PS+AT+ L++ L LE A+
Sbjct: 162 APNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAM 221
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK--GILPDADTYEPL 266
+ M + D V Y+ L+ C +K D + ++ E+ K G + D Y L
Sbjct: 222 EIKEDMAVKGFVVDPVVYSYLMMG-C-VKNSDADGVLKLYQELKEKLGGFVDDGVVYGQL 279
Query: 267 IRTLCLQQRLSEAYDLFREML--RWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
++ +++ EA + + E + V + Y ++ A G+F +A L D + +
Sbjct: 280 MKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKE 339
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P + + T+N ++ G C G+ EEA+ V R M + SPD +S+ ++ C
Sbjct: 340 HNPP---RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLC 396
Query: 385 RIREPGKAYELKVEVDE-NMISWLGIWGLFEDT 416
+A +L E++E N+ +GL DT
Sbjct: 397 DNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDT 429
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 12/220 (5%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTE-----RGLKPNLISFNAVVQG 131
+ E +V YN ++ A + + DEA+ + + + R L NL +FN +V G
Sbjct: 300 VGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNG 359
Query: 132 LCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPS 191
C G+ M +PD ++ +L++ CD +A K+ EM + P
Sbjct: 360 YCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPD 419
Query: 192 VATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM 247
TY L+ + ++++ ++ M E +L P++ YN L + K + D K+F
Sbjct: 420 EYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSF-- 477
Query: 248 KAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREML 287
+M+ + D + Y+ ++R L RL E + EML
Sbjct: 478 -FDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEML 516
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 144/355 (40%), Gaps = 47/355 (13%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
T+ LV ++ +++AM I M +G + + ++ ++ G
Sbjct: 202 ATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQE 261
Query: 148 MNQK--DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI--DSGFSPSVATYNRLIRRL- 202
+ +K D Y L+ + K +A + E + +S S YN ++ L
Sbjct: 262 LKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALS 321
Query: 203 ---RLEDAVGVFRGMTE-----RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK 254
+ ++A+ +F + + R L+ ++ T+N +++ +C + E+A E+ +M
Sbjct: 322 ENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGK--FEEAMEVFRQMGDF 379
Query: 255 GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK- 313
PD ++ L+ LC + L+EA L+ EM V P+ TY LM+ EG+ +
Sbjct: 380 KCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEG 439
Query: 314 -AFH-----------------LQDEMTHKG-------FLPGFVTGFSPSHVTYNAIIYGL 348
A++ LQD++ G F V+ Y I+ L
Sbjct: 440 AAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDEAYKFIMRAL 499
Query: 349 CLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCR--IREPGKAYELKVEVDE 401
GR +E L ++ M L D V + F + +R+ G+ +L+ ++E
Sbjct: 500 SEAGRLDEMLKIVDEM----LDDDTVRVSEELQEFVKEELRKGGREGDLEKLMEE 550
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 22/300 (7%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTE-RGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
Y +L+ Y E +D+A L M KP++ +F ++ C GR M
Sbjct: 182 YTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEM 241
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFS-PSVATYNRLI------RR 201
+ + TY ++I + G + VL++MI+ G S P V T N +I R
Sbjct: 242 SYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRN 301
Query: 202 LR-LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
+R +E F+ M + PD+ T+N LI F K +K + M +
Sbjct: 302 MRKMESWYSRFQLM---GVQPDITTFNILILSFGKAGM--YKKMCSVMDFMEKRFFSLTT 356
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
TY +I T R+ + D+FR+M GV PN+ TY L+NAY G K + +
Sbjct: 357 VTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQ 416
Query: 321 MTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
+ + + T F +N II G + M E PD +++ T+I
Sbjct: 417 IVNSDVV--LDTPF------FNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMI 468
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 108/270 (40%), Gaps = 47/270 (17%)
Query: 155 PDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGV 210
P +TYT L + + P +A + M+ G P++ Y LI + L+ A
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 211 FRGMTE-RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK--------------------- 248
M D PDV T+ LIS CKL DL K+ ++
Sbjct: 202 LEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYG 261
Query: 249 ------------AEMVHKG-ILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNN 295
A+M+ G LPD T +I + + + + + GV P+
Sbjct: 262 KAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDI 321
Query: 296 ETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAE 355
T+ L+ ++ G + K + D M K F FS + VTYN +I GR E
Sbjct: 322 TTFNILILSFGKAGMYKKMCSVMDFM-EKRF-------FSLTTVTYNIVIETFGKAGRIE 373
Query: 356 EALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
+ V R M G+ P++++YC+++ + +
Sbjct: 374 KMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 130/322 (40%), Gaps = 22/322 (6%)
Query: 89 TYNAL--VLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
TY L VL C ++ D+A + M GLKP + + +++ + GK +
Sbjct: 146 TYTKLFKVLGNC--KQPDQASLLFEVMLSEGLKPTIDVYTSLI-SVYGKSELLDKAFSTL 202
Query: 147 XMNQK--DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----R 200
+ D PD T+T LI C G + ++ EM G S TYN +I +
Sbjct: 203 EYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGK 262
Query: 201 RLRLEDAVGVFRGMTER-DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
E+ V M E D PDV T N++I + + +++ + +++ G+ PD
Sbjct: 263 AGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLM--GVQPD 320
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
T+ LI + + + M + S TY ++ + G+ K +
Sbjct: 321 ITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFR 380
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
+M ++G P+ +TY +++ G + VLR + + D + +
Sbjct: 381 KMKYQGV--------KPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCI 432
Query: 380 ILGFCRIREPGKAYELKVEVDE 401
I + + + EL ++++E
Sbjct: 433 INAYGQAGDLATMKELYIQMEE 454
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 17/218 (7%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFE----LLKAGTEKGVESNSVSGRRIREAEQ------ 82
N II G+ G + + E L T + + +GR +R+ E
Sbjct: 254 NTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQ 313
Query: 83 ---VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
V + TT+N L+L++ + ++ M +R +++N V++ GR+
Sbjct: 314 LMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIE 373
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI 199
M + + P+ TY SL++ + G K VL ++++S +N +I
Sbjct: 374 KMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCII 433
Query: 200 RRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKF 233
L ++ M ER PD +T+ T+I +
Sbjct: 434 NAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 471
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 128/322 (39%), Gaps = 44/322 (13%)
Query: 12 RPNPMKLLRLSTCLRNRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNS 71
+P+ + +C R P + F + + E V A + G V+
Sbjct: 207 KPDNATFTTIISCARQN-GVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMAL 265
Query: 72 VSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQG 131
R R + +D T++ L+ Y D + I M G+KPNL+ +N ++
Sbjct: 266 SLYDRARTEKWRID-AVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDS 324
Query: 132 LCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPS 191
+ G+ + P +A+ + ++I +GF+P+
Sbjct: 325 M-GRAK----------------------------------RPWQAKIIYKDLITNGFTPN 349
Query: 192 VATYNRLIR---RLRL-EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEM 247
+TY L+R R R +DA+ ++R M E+ LS V+ YNTL+S + D +AFE+
Sbjct: 350 WSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVD--EAFEI 407
Query: 248 KAEMVH-KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
+M + + PD+ T+ LI R+SEA +M G P T ++ Y
Sbjct: 408 FQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYG 467
Query: 307 IEGQFSKAFHLQDEMTHKGFLP 328
Q D++ G P
Sbjct: 468 KAKQVDDVVRTFDQVLELGITP 489
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 120/307 (39%), Gaps = 13/307 (4%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
E YN + + + ++++ + M ERG+KP+ +F ++ G
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL--- 202
M+ PD T ++I + G+ A + + T++ LIR
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 203 -RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+ + ++ M + P++V YN LI + K P +A + +++ G P+
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRP--WQAKIIYKDLITNGFTPNWS 351
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
TY L+R + +A ++REM G+S Y L++ +AF + +M
Sbjct: 352 TYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
+ P T++++I GR EA L M E G P +VI
Sbjct: 412 KN-------CETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQ 464
Query: 382 GFCRIRE 388
+ + ++
Sbjct: 465 CYGKAKQ 471
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 18/227 (7%)
Query: 175 KARKVLSEMIDSGFSPSVATYNRLIRRLRL----EDAVGVFRGMTERDLSPDVVTYNTLI 230
K+ K+ EM++ G P AT+ +I R + AV F M+ PD VT +I
Sbjct: 193 KSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMI 252
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWG 290
+ + D+ + +A I DA T+ LIR + +++ EM G
Sbjct: 253 DAYGRAGNVDMALSLYDRARTEKWRI--DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAII--YGL 348
V PN Y L+++ G+ + + Q ++ +K + GF+P+ TY A++ YG
Sbjct: 311 VKPNLVIYNRLIDSM---GRAKRPW--QAKIIYKDLI---TNGFTPNWSTYAALVRAYGR 362
Query: 349 CLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYEL 395
G ++AL + R M E GLS + Y T++ R +A+E+
Sbjct: 363 ARYG--DDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEI 407
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 30/209 (14%)
Query: 201 RLRLEDAVGVFRGMTERDLSP--------------DVVTYNTLISKFCKLKEPDLEKAFE 246
+L +DAV MT + +P +V+ YN + F K K DLEK+ +
Sbjct: 139 KLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSK--DLEKSEK 196
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQR--LSEAYDLFREMLRWGVSPNNETYTGLMNA 304
+ EM+ +GI PD T+ +I C +Q A + F +M +G P+N T +++A
Sbjct: 197 LFDEMLERGIKPDNATFTTIIS--CARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDA 254
Query: 305 YRIEGQFSKAFHLQDEM-THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRG 363
Y G A L D T K + VT++ +I + G + L +
Sbjct: 255 YGRAGNVDMALSLYDRARTEKWRIDA---------VTFSTLIRIYGVSGNYDGCLNIYEE 305
Query: 364 MPEIGLSPDAVSYCTVILGFCRIREPGKA 392
M +G+ P+ V Y +I R + P +A
Sbjct: 306 MKALGVKPNLVIYNRLIDSMGRAKRPWQA 334
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 47/246 (19%)
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
A++ A +E+ D A+ I + M ++G+KPNL++ N ++ L G++ +
Sbjct: 289 AMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSL 348
Query: 152 DLAPDERTYTSLI-------------HLF----------------------CDK-GHPGK 175
PDE T+ +L+ LF C K G+ K
Sbjct: 349 GHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEK 408
Query: 176 ARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
A K+L EM SG + S ++YN +I + + + A+ V+ M +RD P+ TY +L+
Sbjct: 409 AVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV- 467
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
+ C + + + E + K + PD Y I +CL++ A +L+ +M G+
Sbjct: 468 RSC------IWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGL 521
Query: 292 SPNNET 297
P+ +T
Sbjct: 522 EPDGKT 527
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
++ + TY+A++ Y +V+E + + G KP+ I+F+ + + G
Sbjct: 252 LMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIR 311
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR-- 200
M D+ P+ Y +L+ G PG AR + +EM+++G +P+ T L++
Sbjct: 312 YVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIY 371
Query: 201 -RLRL-EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLK-EPDLEKAFEMKAEMVHKGIL 257
+ R DA+ ++ M + D + YNTL++ + E + E+ F E V
Sbjct: 372 GKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQ--CR 429
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
PD +Y ++ + +A +LF EML+ GV N
Sbjct: 430 PDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN 466
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 100/262 (38%), Gaps = 54/262 (20%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL-RLED 206
M + L PDE TY++++ ++ G + + + +G+ P ++ L + D
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD 306
Query: 207 AVG---VFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
G V + M D+ P+VV YNTL+ + +P L
Sbjct: 307 YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGL---------------------- 344
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
A LF EML G++PN +T T L+ Y A L +EM
Sbjct: 345 ---------------ARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKA 389
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPE-IGLSPDAVSYCTVILG 382
K + F + YN ++ +G EEA + M E + PD SY ++
Sbjct: 390 KKWPMDF--------ILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAML-- 439
Query: 383 FCRIREPGKAYELKVEVDENMI 404
I G E +E+ E M+
Sbjct: 440 --NIYGSGGKAEKAMELFEEML 459
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 15/249 (6%)
Query: 86 ETTTYNALVLAYCCDERVD---EAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+ TY+ ++ C +R + +A+ M + GL P+ ++++A++ G++
Sbjct: 220 DNITYSTII---TCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVL 276
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
PD ++ L +F + G R VL EM P+V YN L+ +
Sbjct: 277 SLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAM 336
Query: 203 RLEDAVGV----FRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
G+ F M E L+P+ T L+ + K + A ++ EM K
Sbjct: 337 GRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWA--RDALQLWEEMKAKKWPM 394
Query: 259 DADTYEPLIRTLCLQQRLSE-AYDLFREMLR-WGVSPNNETYTGLMNAYRIEGQFSKAFH 316
D Y L+ +C L E A LF +M P+N +YT ++N Y G+ KA
Sbjct: 395 DFILYNTLL-NMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAME 453
Query: 317 LQDEMTHKG 325
L +EM G
Sbjct: 454 LFEEMLKAG 462
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 246 EMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAY 305
EM EMV G+ D TY +I ++A + F M + G+ P+ TY+ +++ Y
Sbjct: 207 EMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVY 266
Query: 306 RIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMP 365
G+ + L + TG+ P + ++ + G + VL+ M
Sbjct: 267 SKSGKVEEVLSLYER--------AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMK 318
Query: 366 EIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE 401
+ + P+ V Y T++ R +PG A L E+ E
Sbjct: 319 SMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLE 354
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 16/187 (8%)
Query: 153 LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAV 208
+ PD TY +I + C+ G + +++EM P+ A++ +I + + ++
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 209 GVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL-----PDADTY 263
V R M E + V TYN +I CK K K+ E KA + G++ P++ TY
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRK-----KSAEAKA--LIDGVMSCRMRPNSVTY 290
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
LI C ++ L EA +LF M+ G P++E Y L++ G F A L E
Sbjct: 291 SLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESME 350
Query: 324 KGFLPGF 330
K ++P F
Sbjct: 351 KNWVPSF 357
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 133/323 (41%), Gaps = 30/323 (9%)
Query: 7 SMLLTRPNPMKLLRLSTCLRNRLSPPNVIIR--------------GFTAVGNL------- 45
S+L + NP ++L + C LSP + R F AV L
Sbjct: 47 SLLKSENNPDRILEI--CRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQN 104
Query: 46 QSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDE 105
Q + K A + + S+ R E ++ + NAL+ A + E
Sbjct: 105 QPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKE 164
Query: 106 AMGILRCMTER-GLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLI 164
A + M + G++P+L ++N +++ LC G M +K + P ++ +I
Sbjct: 165 ANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMI 224
Query: 165 HLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLS 220
F + + RKV+ M + G VATYN +I +R + +A + G+ +
Sbjct: 225 DGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMR 284
Query: 221 PDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAY 280
P+ VTY+ LI FC E +L++A + MV G PD++ Y LI LC A
Sbjct: 285 PNSVTYSLLIHGFC--SEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETAL 342
Query: 281 DLFREMLRWGVSPNNETYTGLMN 303
L RE + P+ L+N
Sbjct: 343 ILCRESMEKNWVPSFSVMKWLVN 365
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 18/234 (7%)
Query: 187 GFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPD-L 241
G P + TYNR+IR L + + M + + P ++ +I F K ++ D +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 242 EKAFEMKAEM-VHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTG 300
K M E VH G+ TY +I+ LC +++ +EA L ++ + PN+ TY+
Sbjct: 237 RKVMRMMDEFGVHVGVA----TYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSL 292
Query: 301 LMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGV 360
L++ + E +A +L + M G+ P Y +I+ LC G E AL +
Sbjct: 293 LIHGFCSEENLDEAMNLFEVMV--------CNGYKPDSECYFTLIHCLCKGGDFETALIL 344
Query: 361 LRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMISWLGIWGLFE 414
R E P ++ G + +A EL V E + +W E
Sbjct: 345 CRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVE 398
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 124/310 (40%), Gaps = 27/310 (8%)
Query: 47 SESKKVGGAFELLKAGTEKGVESN-------------------SVSGRRIREAEQVVDET 87
++S KV FE+ + GVE+N + I ++ V +
Sbjct: 513 AKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDR 572
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERG--LKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+NAL+ A VD A +L M + P+ IS A+++ C G++
Sbjct: 573 VVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVY 632
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RR 201
+++ + YT ++ G A + +M + +P ++ LI
Sbjct: 633 QMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 202 LRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
L++A G+ + + + ++Y++L+ C K D +KA E+ ++ + P
Sbjct: 693 KMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAK--DWKKALELYEKIKSIKLRPTIS 750
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
T LI LC +L +A + E+ G+ PN TY+ LM A + F +F L +
Sbjct: 751 TMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQA 810
Query: 322 THKGFLPGFV 331
G P +
Sbjct: 811 KGDGVSPNLI 820
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 133/314 (42%), Gaps = 51/314 (16%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
+T+N L+ + ++ A G+LR + E G
Sbjct: 468 STFNMLMSVCASSQDIEGARGVLRLVQESG------------------------------ 497
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLR 203
+ D + YT+LI G +V +M +SG ++ T+ LI R +
Sbjct: 498 -----MTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQ 552
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG--ILPDAD 261
+ A G + + +++ PD V +N LIS C + +++AF++ AEM + I PD
Sbjct: 553 VAKAFGAYGILRSKNVKPDRVVFNALISA-CG-QSGAVDRAFDVLAEMKAETHPIDPDHI 610
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+ L++ C ++ A ++++ + ++G+ E YT +N+ G + A + +M
Sbjct: 611 SIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDM 670
Query: 322 THKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVIL 381
K +P V ++A+I +EA G+L+ G+ +SY +++
Sbjct: 671 KEK--------DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMG 722
Query: 382 GFCRIREPGKAYEL 395
C ++ KA EL
Sbjct: 723 ACCNAKDWKKALEL 736
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 131/316 (41%), Gaps = 21/316 (6%)
Query: 75 RRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCG 134
R ++E+ D Y L+ + +VD + M+ G++ NL +F A++ G
Sbjct: 491 RLVQESGMTAD-CKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCAR 549
Query: 135 KGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM------IDSGF 188
G++ + K++ PD + +LI G +A VL+EM ID
Sbjct: 550 AGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDH 609
Query: 189 SPSVATYNRLIRRLRLEDAVGVFRGMTERDL--SPDVVTYNTLISKFCKLKEPDLEKAFE 246
A ++E A V++ + + + +P+V T+ C K D + A
Sbjct: 610 ISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVY---TIAVNSCS-KSGDWDFACS 665
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
+ +M K + PD + LI + L EA+ + ++ G+ +Y+ LM A
Sbjct: 666 IYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACC 725
Query: 307 IEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPE 366
+ KA L +++ P+ T NA+I LC + +A+ L +
Sbjct: 726 NAKDWKKALELYEKIKS--------IKLRPTISTMNALITALCEGNQLPKAMEYLDEIKT 777
Query: 367 IGLSPDAVSYCTVILG 382
+GL P+ ++Y ++L
Sbjct: 778 LGLKPNTITYSMLMLA 793
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 102/264 (38%), Gaps = 50/264 (18%)
Query: 186 SGFSPSVA-TYNRLIRRLRLEDAVGVFRGMTERD-------------------------- 218
+G SP + YNRL+R R++D + + + +RD
Sbjct: 397 NGRSPETSDAYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAF 456
Query: 219 ------LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCL 272
L+P + T+N L+S C + D+E A + + G+ D Y LI +
Sbjct: 457 RFTKLILNPTMSTFNMLMS-VCASSQ-DIEGARGVLRLVQESGMTADCKLYTTLISSCAK 514
Query: 273 QQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT 332
++ +++F +M GV N T+ L++ GQ +KAF + K
Sbjct: 515 SGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSK-------- 566
Query: 333 GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIG--LSPDAVSYCTVILGFCRIREPG 390
P V +NA+I G + A VL M + PD +S ++ C +
Sbjct: 567 NVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVE 626
Query: 391 KAYELKVEVDENMISWLGIWGLFE 414
+A E+ MI GI G E
Sbjct: 627 RAKEVY-----QMIHKYGIRGTPE 645
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 7/207 (3%)
Query: 82 QVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXX 141
+++ + +Y L+ +YC ++A+ I+R M +G++ I+F ++ L KG +
Sbjct: 169 KIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVA 228
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI-- 199
M +K D Y I + K P + ++++ EM G P +YN L+
Sbjct: 229 DNLWNEMVKKGCELDNAAYNVRI-MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTA 287
Query: 200 --RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
R L++A V+ G+ + +P+ T+ TLI C + + A K+ +HK +
Sbjct: 288 YCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHK--I 345
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFR 284
PD +T + L+ L ++ +A L R
Sbjct: 346 PDFNTLKHLVVGLVENKKRDDAKGLIR 372
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 156 DERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVF 211
+E Y++LI + A + +M G S ++N L+ + +F
Sbjct: 101 EEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLF 160
Query: 212 RGMTER--DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRT 269
+ +R + PD ++Y LI +C P EKA E+ +M KG+ + ++ +
Sbjct: 161 DEIPQRYNKIIPDKISYGILIKSYCDSGTP--EKAIEIMRQMQGKGMEVTTIAFTTILSS 218
Query: 270 LCLQQRLSEAYDLFREMLRWGVSPNNETYT-GLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
L + L A +L+ EM++ G +N Y +M+A + + K L +EM+
Sbjct: 219 LYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVK--ELIEEMSS----- 271
Query: 329 GFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC--RI 386
G P ++YN ++ C G +EA V G+ +P+A ++ T+I C R+
Sbjct: 272 ---MGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRL 328
Query: 387 REPGKA------YELKVEVDENMISWLGIWGLFEDTRKSLMQGL 424
E G A Y K+ D N + L + GL E+ ++ +GL
Sbjct: 329 YEQGYAIFKKSVYMHKIP-DFNTLKHL-VVGLVENKKRDDAKGL 370
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 116/285 (40%), Gaps = 17/285 (5%)
Query: 84 VDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX 143
+ E Y+ L+ +Y + AM M + G + +SFNA++
Sbjct: 99 IKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQ 158
Query: 144 XXXXMNQK--DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
+ Q+ + PD+ +Y LI +CD G P KA +++ +M G + + ++
Sbjct: 159 LFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS 218
Query: 202 L----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
L LE A ++ M ++ D YN I ++ E+ E+ EM G+
Sbjct: 219 LYKKGELEVADNLWNEMVKKGCELDNAAYNVRI---MSAQKESPERVKELIEEMSSMGLK 275
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
PD +Y L+ C + L EA ++ + +PN T+ L+ + + + +
Sbjct: 276 PDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAI 335
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
+ + +P F T ++ GL + ++A G++R
Sbjct: 336 FKKSVYMHKIPDF--------NTLKHLVVGLVENKKRDDAKGLIR 372
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 26/252 (10%)
Query: 156 DERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMT 215
D +SLI ++ G G ARKV S++ + A + + ++A+ + + M
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMK 210
Query: 216 ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQR 275
+ PDV+T+N LIS F ++ EK E+ M G PD ++ +I L +
Sbjct: 211 LLGIKPDVITWNALISGFSHMRNE--EKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQ 268
Query: 276 LSEAYDLFREMLRWGVSPNNETYTGLMN-----AYRIEGQFSKAFHLQDEMTHKGFLP-- 328
+A+D F++ML G+ PN+ T L+ AY G+ + + + GF+
Sbjct: 269 NEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSA 328
Query: 329 --------GFVTGF--------SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
GF++ + VT+N++I+ G A++A+ + M G D
Sbjct: 329 LLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLD 388
Query: 373 AVSYCTVILGFC 384
+++ T IL C
Sbjct: 389 HLTF-TAILTAC 399
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 18/231 (7%)
Query: 119 KPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARK 178
+ +L+ FNA++ G + M + PD T+ +LI F + K +
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 179 VLSEMIDSGFSPSVATYNR----LIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFC 234
+L M G+ P V ++ L+ + E A F+ M L P+ T TL+
Sbjct: 240 ILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 235 KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
L ++ E+ V G+ L+ +SEA LFR+ +
Sbjct: 300 TLAY--MKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPK----KT 353
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAII 345
T+ ++ Y G KA L D+M TG H+T+ AI+
Sbjct: 354 TVTFNSMIFCYANHGLADKAVELFDQME--------ATGEKLDHLTFTAIL 396
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 130/322 (40%), Gaps = 19/322 (5%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T++ LV +C ++DEA LR + +V LC K +
Sbjct: 251 AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLD 310
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKG---HPGKARKVLSEMIDSGFSPSVATYNRLIRRLR 203
+ +R Y I G +P + +S + G V YN ++ +L
Sbjct: 311 EIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPL--EGCELEVFRYNSMVFQLL 368
Query: 204 LEDAV-GVFRGMTE---RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPD 259
E+ + GV+ +TE R +SP+ T N + FCK D +A E+ G P
Sbjct: 369 KENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVD--EALELYRSRSEIGFAPT 426
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
A +Y LI TLC + + +AYD+ + + G +T++ L NA +G+ A L
Sbjct: 427 AMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVI 486
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTV 379
+ LP + G II LC +G+ E+AL + + G+ + ++
Sbjct: 487 AAAERDLLPKRIAGCK--------IISALCDVGKVEDALMINELFNKSGVDTSFKMFTSL 538
Query: 380 ILGFCRIREPGKAYELKVEVDE 401
I G + A +L + + E
Sbjct: 539 IYGSITLMRGDIAAKLIIRMQE 560
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 127/372 (34%), Gaps = 82/372 (22%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
E YN++V + +D IL M RG+ PN + NA + C G +
Sbjct: 356 EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELY 415
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE 205
++ AP +Y LIH C +A VL ID G T++ L L +
Sbjct: 416 RSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWK 475
Query: 206 DAVGVFRGMT----ERDLSPDVVTYNTLISKFCKL-------------KEPDLEKAFEMK 248
+ R + ERDL P + +IS C + + ++ +F+M
Sbjct: 476 GKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMF 535
Query: 249 AEMVH--------------------KGILPDADTYEPLIRTLC----------------- 271
+++ KG P Y +I+ +C
Sbjct: 536 TSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQ 595
Query: 272 --LQQRLSEAYDLFRE-----------------MLRWGVSPNNETYTGLMNAYRIEGQFS 312
L + +AY+LF E M R G++P + ++ +Y + +
Sbjct: 596 LSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIA 655
Query: 313 KAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
A H ++ +G Y +I GLC + ++A+ L M GL P
Sbjct: 656 DALHFFHDLREQG---------KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPS 706
Query: 373 AVSYCTVILGFC 384
Y I C
Sbjct: 707 IECYEVNIQKLC 718
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 126/298 (42%), Gaps = 24/298 (8%)
Query: 73 SGRRIREAEQVVDETT---------TYNALVLAYCCDERVDEAMGILRCMTE-RGLKPNL 122
S R+ +EA +++DE YN + A ++ L+ ++ G + +
Sbjct: 298 SKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEV 357
Query: 123 ISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSE 182
+N++V L + + M + ++P+++T + + FC G +A ++
Sbjct: 358 FRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRS 417
Query: 183 MIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE 238
+ GF+P+ +YN LI L +E A V +G +R T++TL + C +
Sbjct: 418 RSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGK 477
Query: 239 PDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETY 298
PD+ + E+ + +LP +I LC ++ +A + + GV + + +
Sbjct: 478 PDMAR--ELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMF 535
Query: 299 TGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEE 356
T L+ + ++ ++ K + G++P+ Y +I +C + E+
Sbjct: 536 TSLI--------YGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEK 585
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 138/380 (36%), Gaps = 72/380 (18%)
Query: 55 AFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMT 114
F+LLK GV + ++ +R V T NA + +C VDEA+ + R +
Sbjct: 364 VFQLLKENNLDGV-YDILTEMMVR---GVSPNKKTMNAALCFFCKAGFVDEALELYRSRS 419
Query: 115 ERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPG 174
E G P +S+N ++ LC + + +T+++L + C KG P
Sbjct: 420 EIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPD 479
Query: 175 KARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLI 230
AR+++ + P ++I L ++EDA+ + + + + +LI
Sbjct: 480 MARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLI 539
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLC------------------- 271
L D+ A ++ M KG P Y +I+ +C
Sbjct: 540 YGSITLMRGDI--AAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLS 597
Query: 272 LQQRLSEAYDLFRE-----------------MLRWGVSPNNETYTGLMNAYRIEGQFSKA 314
L + +AY+LF E M R G++P + ++ +Y + + A
Sbjct: 598 LWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADA 657
Query: 315 FHLQDEMTHKG---------FLPGFVT-----------------GFSPSHVTYNAIIYGL 348
H ++ +G + G G PS Y I L
Sbjct: 658 LHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKL 717
Query: 349 CLLGRAEEALGVLRGMPEIG 368
C + +EA+G++ + G
Sbjct: 718 CNEEKYDEAVGLVNEFRKSG 737
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 11/226 (4%)
Query: 87 TTTYNALVL-AYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
T N L+L +Y +E++ +A+ + E+G K + ++ GLC ++
Sbjct: 637 TVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFL 695
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE 205
M + L P Y I C++ +A +++E SG + N L+
Sbjct: 696 EEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAM-- 753
Query: 206 DAVGVFRGMTE----RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+ GV+ T D P++ + LI F D+E + E++ K D
Sbjct: 754 KSKGVYEAWTRMRNIEDKIPEMKSLGELIGLFSG--RIDMEVELKRLDEVIEKCYPLDMY 811
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRI 307
TY L+R + + Q +AY++ + R G PN T L A RI
Sbjct: 812 TYNMLLRMIVMNQ-AEDAYEMVERIARRGYVPNERTDMILERANRI 856
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 26/230 (11%)
Query: 156 DERTYTSLIHLFCDKGHPGKARKVLSEMIDSG---FSPSVATY------------NRLIR 200
+E Y S+I F G +A + M+ S P++ TY N I
Sbjct: 206 NENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYIN 265
Query: 201 RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFC-KLKEPDLEKAFEMKAEMVHKGILPD 259
+ +E +FR M + + PDV N L+ + L D + F + V P+
Sbjct: 266 HVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMS--VVYDCEPN 323
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
+ TY+ LI LC Q R A +L EM G PN ++Y L+NA+ + G+ A
Sbjct: 324 SFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLW 383
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGL 369
EM G + F ++Y ++ C G+ +EA +L + E L
Sbjct: 384 EMIENGRVVDF--------ISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 18/193 (9%)
Query: 203 RLEDAVGVFRGM-TERDLS--PDVVTYNTLISKF------CKLKEPDLEKAFEMKAEMVH 253
+L AV +FR M T ++L P + TY+ L + +E + +MV
Sbjct: 222 KLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVD 281
Query: 254 KGILPDADTYEPLIRTLCLQQRLSEAYDLFREM-LRWGVSPNNETYTGLMNAYRIEGQFS 312
GI PD L++ L +++A +F +M + + PN+ TY L++ +G+
Sbjct: 282 SGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTI 341
Query: 313 KAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
A L EM KGF+P +YN+++ L G ++A+ L M E G D
Sbjct: 342 NARELLSEMKGKGFVPN--------GKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVD 393
Query: 373 AVSYCTVILGFCR 385
+SY T++ CR
Sbjct: 394 FISYRTLVDESCR 406
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 106/243 (43%), Gaps = 37/243 (15%)
Query: 90 YNALVLAYCCDERVDEAMGILRCM-TERGL--KPNLISFNAVVQGLCGKGRMXXXXXXXX 146
YN+++ + ++ A+ I R M T + L +P + +++ + + L G+G
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRG---------- 259
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----RL 202
+Y + +++ R + +M+DSG P V N L++ L
Sbjct: 260 ----------NNSYINHVYM-------ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSL 302
Query: 203 RLEDAVGVFRGMTE-RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+ DA+ +F M+ D P+ TY+ LI C + A E+ +EM KG +P+
Sbjct: 303 HVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCA--QGRTINARELLSEMKGKGFVPNGK 360
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+Y L+ L + +A EM+ G + +Y L++ +G++ +A L + +
Sbjct: 361 SYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEML 420
Query: 322 THK 324
K
Sbjct: 421 REK 423
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 91 NALVLAYCCDERVDEAMGILRCMTE-RGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
N LV Y V++A+ I M+ +PN +++ ++ GLC +GR M
Sbjct: 292 NCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMK 351
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVG 209
K P+ ++Y SL++ F G A K L EMI++G R++
Sbjct: 352 GKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG---------RVV---------- 392
Query: 210 VFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRT 269
D ++Y TL+ + C+ + D EM+ + L D D+Y+ L+
Sbjct: 393 ------------DFISYRTLVDESCRKGKYDEATRL---LEMLREKQLVDRDSYDKLVNV 437
Query: 270 L 270
L
Sbjct: 438 L 438
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 103/248 (41%), Gaps = 22/248 (8%)
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RL 204
N L D+ + T ++ C+KGH A K++ + F P + LI +L
Sbjct: 203 NDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIF-PDENICDLLISGWCIAEKL 261
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKL--------KEPDLEKAFEMKAEMVHKGI 256
++A + M+ YN ++ CKL +P++EK EM +G+
Sbjct: 262 DEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVL---LEMEFRGV 318
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
+ +T+ LI LC +R EA LF M WG P+ ETY L+ + + +
Sbjct: 319 PRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDE 378
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
+ D+M G+ G + Y + LC + R E A+ V + M G P +Y
Sbjct: 379 MIDKMKSAGY------GELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTY 432
Query: 377 CTVILGFC 384
++ C
Sbjct: 433 DLLMGKMC 440
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 98/259 (37%), Gaps = 50/259 (19%)
Query: 80 AEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
A ++ + + L+ +C E++DEA + M+ G + ++N ++ +C
Sbjct: 238 ANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCK----- 292
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGK----ARKVLSEMIDSGFSPSVATY 195
C K P K KVL EM G + T+
Sbjct: 293 ---------------------------LCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETF 325
Query: 196 NRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKF---CKLKEPDLEKAFEMK 248
N LI L R E+A+ +F M E PD TY LI ++ E D EM
Sbjct: 326 NVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGD-----EMI 380
Query: 249 AEMVHKGI--LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
+M G L + Y ++ LC +RL A +F+ M G P +TY LM
Sbjct: 381 DKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMC 440
Query: 307 IEGQFSKAFHLQDEMTHKG 325
Q ++A L E KG
Sbjct: 441 ANNQLTRANGLYKEAAKKG 459
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 15/190 (7%)
Query: 87 TTTYNALVLAYC--CDER-----VDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
T YN ++ C C ++ E +L M RG+ N +FN ++ LC R
Sbjct: 280 TKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTE 339
Query: 140 XXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP--SVATYNR 197
M + PD TY LI G+ +++ +M +G+ + Y
Sbjct: 340 EAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYG 399
Query: 198 LIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH 253
++ L RLE A+ VF+ M P + TY+ L+ K C + L +A + E
Sbjct: 400 FLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQ--LTRANGLYKEAAK 457
Query: 254 KGILPDADTY 263
KGI Y
Sbjct: 458 KGIAVSPKEY 467
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 11/242 (4%)
Query: 90 YNALVLAYCCDERV--DEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
YN ++ CC + DE G M G PN ++FN V+ + GK ++
Sbjct: 667 YNCVI--NCCARALPLDELSGTFEEMIRYGFTPNTVTFN-VLLDVYGKAKLFKKVNELFL 723
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLR 203
+ ++ D +Y ++I + + M GFS S+ YN L+ + +
Sbjct: 724 LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQ 783
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
+E + + M + PD TYN +I+ + + + +++ ++ E+ G+ PD +Y
Sbjct: 784 MEKFRSILKRMKKSTSGPDHYTYNIMINIYGE--QGWIDEVADVLKELKESGLGPDLCSY 841
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
LI+ + + EA L +EM + P+ TYT L+ A R +F +A M
Sbjct: 842 NTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQ 901
Query: 324 KG 325
G
Sbjct: 902 MG 903
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 127/326 (38%), Gaps = 31/326 (9%)
Query: 78 REAEQVVDETTTYN---------------ALVLAYCCDERVDEAMGILRCMTERGLKPNL 122
+E+ Q+ D YN ++ Y EA + + G+ +
Sbjct: 534 KESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDR 593
Query: 123 ISFNAVVQGLCGKGRMXXXXXXXXXMN-QKDLAPDERTYTSLIHLFCDKGHPGKARKVLS 181
I F+ VV+ G + M+ QKD+ PD + ++ ++ K + +
Sbjct: 594 IGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYY 653
Query: 182 EMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLK 237
+ SG + YN +I R L L++ G F M +P+ VT+N L+ + K K
Sbjct: 654 RIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAK 713
Query: 238 EPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNET 297
+K E+ G++ D +Y +I + + + M G S + E
Sbjct: 714 L--FKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEA 770
Query: 298 YTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEA 357
Y L++AY + Q K + M + P H TYN +I G +E
Sbjct: 771 YNTLLDAYGKDKQMEKFRSILKRMKK--------STSGPDHYTYNIMINIYGEQGWIDEV 822
Query: 358 LGVLRGMPEIGLSPDAVSYCTVILGF 383
VL+ + E GL PD SY T+I +
Sbjct: 823 ADVLKELKESGLGPDLCSYNTLIKAY 848
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
VVD +YN ++ AY ++ ++ M G +L ++N ++ +M
Sbjct: 730 VVD-VISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFR 788
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M + PD TY +I+++ ++G + VL E+ +SG P + +YN LI+
Sbjct: 789 SILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAY 848
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
+E+AVG+ + M R++ PD VTY L++
Sbjct: 849 GIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVT 881
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 133/309 (43%), Gaps = 18/309 (5%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTE-RGLKPNLISFNAVVQGLCGKGRMXXX 141
VV + ++ +V Y ++EA +L M E + + P++ F +++
Sbjct: 589 VVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKL 648
Query: 142 XXXXXXMNQKDLAPDERTYTSLIHLFCDKGHP-GKARKVLSEMIDSGFSPSVATYNRLIR 200
+ + + ++ Y +I+ C + P + EMI GF+P+ T+N L+
Sbjct: 649 QHLYYRIRKSGIHWNQEMYNCVINC-CARALPLDELSGTFEEMIRYGFTPNTVTFNVLLD 707
Query: 201 ---RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKE-PDLEKAFEMKAEMVHKGI 256
+ +L V + +R DV++YNT+I+ + K K+ ++ A + M G
Sbjct: 708 VYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIK---NMQFDGF 764
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
+ Y L+ +++ + + + M + P++ TY ++N Y +G +
Sbjct: 765 SVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAD 824
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
+ E+ +G P +YN +I + G EEA+G+++ M + PD V+Y
Sbjct: 825 VLKELKE--------SGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTY 876
Query: 377 CTVILGFCR 385
++ R
Sbjct: 877 TNLVTALRR 885
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 156/395 (39%), Gaps = 60/395 (15%)
Query: 39 FTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQV--VD----------- 85
FT + NLQ++ GA + ++ T G + +S+ G ++ E+V +D
Sbjct: 423 FTLI-NLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFH 481
Query: 86 -----ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
T++++LV+AY VD+ +G+LR R ++ ++ G++
Sbjct: 482 NHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTD 541
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS-------GFSPSVA 193
+ D + +++I ++ G +A K+ + S GFS V
Sbjct: 542 AVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVR 601
Query: 194 TYNRLIRRLRLEDAVGVFRGMTE-RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMV 252
Y ++ LE+A V M E +D+ PDV + ++ + K DL+ + +
Sbjct: 602 MY---VKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKC---DLQDKLQHLYYRI 655
Query: 253 HK-GILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQF 311
K GI + + Y +I L E F EM+R+G +PN T+ L++ Y F
Sbjct: 656 RKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLF 715
Query: 312 SKAFHL---------QDEMTHKGFLPGF-----------------VTGFSPSHVTYNAII 345
K L D +++ + + GFS S YN ++
Sbjct: 716 KKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLL 775
Query: 346 YGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
+ E+ +L+ M + PD +Y +I
Sbjct: 776 DAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMI 810
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 134/351 (38%), Gaps = 42/351 (11%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+N ++ A V A M E G++PN+ + ++ GL K
Sbjct: 212 VFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATI-GMLMGLYQKNWNVEEAEFAFSH 270
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY----NRLIRRLRL 204
+K E Y+S+I ++ KA +V+ M + + N ++ ++
Sbjct: 271 MRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKM 330
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
E A + M SP+++ YNTLI+ + K+ + +E A + + + G+ PD +Y
Sbjct: 331 ELAESILVSMEAAGFSPNIIAYNTLITGYGKIFK--MEAAQGLFHRLCNIGLEPDETSYR 388
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
+I EA ++E+ R G PN+ L+N G A ++MT
Sbjct: 389 SMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGI 448
Query: 325 G---------------------FLPGFVTGFSPSHV-----TYNAIIYGLCLLGRAEEAL 358
G +P + G +H+ ++++++ G ++ L
Sbjct: 449 GCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCL 508
Query: 359 GVLRGMPEIGLSPDAVSYCTVILGFCRIREPG------KAYELKVEVDENM 403
G+LR E A L C +E G K Y K+E DE +
Sbjct: 509 GLLR---EKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEI 556
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 14/209 (6%)
Query: 87 TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
T T+N L+ Y ++ + + L + +R ++IS+N ++
Sbjct: 699 TVTFNVLLDVYG-KAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIK 757
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----RL 202
M + Y +L+ + K R +L M S P TYN +I +
Sbjct: 758 NMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 817
Query: 203 RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADT 262
+++ V + + E L PD+ +YNTLI + +E+A + EM + I+PD T
Sbjct: 818 WIDEVADVLKELKESGLGPDLCSYNTLIKAYGI--GGMVEEAVGLVKEMRGRNIIPDKVT 875
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
Y L+ L D F E ++W +
Sbjct: 876 YTNLVTAL-------RRNDEFLEAIKWSL 897
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 159/417 (38%), Gaps = 62/417 (14%)
Query: 35 IIRGFTAVGNLQSESKKVGGAFE---LLKAGTEKGVESNSVSGRRIREAEQVVDETT--- 88
I++ + V L + G AF+ L E G S RI A V DE +
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRD 176
Query: 89 --TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK-GRMXXXXXXX 145
T+N ++ YC VDEA + M + + P+ + +V CG+ G M
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSA-CGRTGNMRYNRAIY 235
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE 205
+ + D+ D T+L+ ++ G AR+ +M S A + + RL+
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLD 295
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKF-----------------CKLKEPDLEKAFEMK 248
DA +F ++DL V + T+IS + C +PD+ F +
Sbjct: 296 DAQVIFDQTEKKDL----VCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLS----------------EAYDLFREMLRWGVS 292
+ + GIL A I L+ LS D+F +M R V
Sbjct: 352 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 411
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
+++ ++NA + G+ S A L M + P+ VT+ ++YG G
Sbjct: 412 ----SWSSMINALSMHGEASDALSLFARMKQE--------NVEPNEVTFVGVLYGCSHSG 459
Query: 353 RAEEALGVLRGMP-EIGLSPDAVSYCTVILGFCRIREPGKAYEL--KVEVDENMISW 406
EE + M E ++P Y ++ F R +A E+ + V N++ W
Sbjct: 460 LVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIW 516
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 17/271 (6%)
Query: 124 SFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEM 183
+F+ V + L G+ +++ D T T++I C +GH +A V+
Sbjct: 140 TFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHH 199
Query: 184 IDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL--- 236
D ++ Y L+ + +++A V + M ++PD+ +N+L++ C+
Sbjct: 200 KDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVN 259
Query: 237 KEPD--LEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
+ P + +A + EM I P + +Y L+ L +R+ E+ + +M R G P+
Sbjct: 260 RNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPD 319
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRA 354
+Y ++ + G+F K + DEM + GF P Y +I LC + R
Sbjct: 320 TGSYYFVVRVLYLTGRFGKGNQIVDEMIER--------GFRPERKFYYDLIGVLCGVERV 371
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVILGFCR 385
AL + M + Y +I C+
Sbjct: 372 NFALQLFEKMKRSSVGGYGQVYDLLIPKLCK 402
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 93/240 (38%), Gaps = 34/240 (14%)
Query: 85 DETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXX 144
+E + Y +L+ + V EA +++ M G+ P+L FN+++ LC +
Sbjct: 206 NELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERN-------- 257
Query: 145 XXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----R 200
N L P+ A ++ EM P+ +YN L+ R
Sbjct: 258 -VNRNPSGLVPE-------------------ALNIMLEMRSYKIQPTSMSYNILLSCLGR 297
Query: 201 RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
R+ ++ + M PD +Y ++ K ++ EM+ +G P+
Sbjct: 298 TRRVRESCQILEQMKRSGCDPDTGSYYFVVRVL--YLTGRFGKGNQIVDEMIERGFRPER 355
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
Y LI LC +R++ A LF +M R V + Y L+ G F K L +E
Sbjct: 356 KFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEE 415
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 24/183 (13%)
Query: 75 RRIREAEQVVDETTT---------YNALVLAYCCDER---------VDEAMGILRCMTER 116
R ++EA +V+ + + +N+L+ C ER V EA+ I+ M
Sbjct: 222 RNVKEARRVIQDMKSAGITPDLFCFNSLLTCLC--ERNVNRNPSGLVPEALNIMLEMRSY 279
Query: 117 GLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKA 176
++P +S+N ++ L R+ M + PD +Y ++ + G GK
Sbjct: 280 KIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKG 339
Query: 177 RKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISK 232
+++ EMI+ GF P Y LI L R+ A+ +F M + Y+ LI K
Sbjct: 340 NQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPK 399
Query: 233 FCK 235
CK
Sbjct: 400 LCK 402
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 127/327 (38%), Gaps = 30/327 (9%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+YN +V AY D ++ I R + + +P+ +S+N ++ G M
Sbjct: 76 SYNVIVKAYAKDSKIH----IARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM 131
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR----L 204
+ D T + LI CD+ K S + GF + N + L
Sbjct: 132 RKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFS--VSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+AV VF GM E D V++N++I + + KE KA + EM+ KG D T
Sbjct: 190 REAVSVFYGMDEL---RDEVSWNSMIVAYGQHKEG--AKALALYKEMIFKGFKIDMFTLA 244
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
++ L L ++++ G N+ +GL++ Y G + +
Sbjct: 245 SVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV---- 300
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGR-AEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
F SP V +N +I G + +EEA+ R M IG PD S+ V
Sbjct: 301 -----FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355
Query: 384 CRIREPGKAYE-----LKVEVDENMIS 405
+ P + + +K + N IS
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRIS 382
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 138/317 (43%), Gaps = 37/317 (11%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLK-PNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
+N LV Y + ++ + M +G P+ SF V++ + +
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR-LRLEDA 207
+ L T+LI ++ G ARKV EM P++ +N +I R D
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM----HQPNLVAWNAVITACFRGNDV 188
Query: 208 VGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLI 267
G R + ++ L + ++N +++ + +K +LE A + +EM H+ D ++ +I
Sbjct: 189 AGA-REIFDKMLVRNHTSWNVMLAGY--IKAGELESAKRIFSEMPHR----DDVSWSTMI 241
Query: 268 RTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEG--QFSKAFH--------- 316
+ +E++ FRE+ R G+SPN + TG+++A G +F K H
Sbjct: 242 VGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYS 301
Query: 317 --------LQDEMTHKGFLPGFVTGFSPSH-----VTYNAIIYGLCLLGRAEEALGVLRG 363
L D + G +P F V++ ++I GL + G+ EEA+ +
Sbjct: 302 WIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNE 361
Query: 364 MPEIGLSPDAVSYCTVI 380
M G++PD +S+ +++
Sbjct: 362 MTAYGVTPDGISFISLL 378
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
A+ M E + P V+ Y TLI + + +L+KA EM EM KG LP+ TY +
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGY--VVSGELDKAKEMFREMTVKGQLPNVFTYNSM 765
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
IR LC+ EA L +EM G +PN Y+ L+ R G+ S+A + EM KG
Sbjct: 766 IRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGH 825
Query: 327 LPGFVT 332
V+
Sbjct: 826 YVHLVS 831
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSH 338
A M G+ P+ YT L++ Y + G+ KA + EMT KG LP T
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFT------ 761
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVE 398
YN++I GLC+ G EA +L+ M G +P+ V Y T++ G+ +R+ GK E +
Sbjct: 762 --YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV-GY--LRKAGKLSEARKV 816
Query: 399 VDE 401
+ E
Sbjct: 817 IKE 819
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 90 YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMN 149
Y L+ Y +D+A + R MT +G PN+ ++N++++GLC G M
Sbjct: 727 YTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 786
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG 187
+ P+ Y++L+ G +ARKV+ EM+ G
Sbjct: 787 SRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 173 PGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNT 228
P A L+ M + G PSV Y LI L+ A +FR MT + P+V TYN+
Sbjct: 705 PLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 764
Query: 229 LISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLR 288
+I C E +A + EM +G P+ Y L+ L +LSEA + +EM++
Sbjct: 765 MIRGLCMAGE--FREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVK 822
Query: 289 WG 290
G
Sbjct: 823 KG 824
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----R 203
M + + P YT+LI + G KA+++ EM G P+V TYN +IR L
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 774
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKG 255
+A + + M R +P+ V Y+TL+ K L +A ++ EMV KG
Sbjct: 775 FREACWLLKEMESRGCNPNFVVYSTLVGYL--RKAGKLSEARKVIKEMVKKG 824
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 106/258 (41%), Gaps = 20/258 (7%)
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR-----RLRL 204
Q+ + Y ++I ++ E+I SV YN +IR +
Sbjct: 101 QRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLF 160
Query: 205 EDAVGVFRGMTERDLS-PDVVTYNTLI----SKFCKLK--EPDLEKAFEMKAEMVHKGIL 257
A V+ M D S PD+ TY L+ +F KL L + +M G++
Sbjct: 161 NRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVI 220
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL 317
PD +I+ + EA +F+EM +G PN TY+ L+ +G+ +
Sbjct: 221 PDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGF 280
Query: 318 QDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYC 377
EM KG + P+ Y +I L + R +EA+ V+ M LSPD ++Y
Sbjct: 281 YKEMQVKGMV--------PNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYN 332
Query: 378 TVILGFCRIREPGKAYEL 395
TV+ CR +A E+
Sbjct: 333 TVLTELCRGGRGSEALEM 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
V+ +T N ++ AY VDEA+ + + M G +PN +++ +V+G+C KGR+
Sbjct: 219 VIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGL 278
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
M K + P+ Y LI + +A +V+ +M+ + SP + TYN ++ L
Sbjct: 279 GFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTEL 338
Query: 203 ----RLEDAVGVFRGMTERDLSPDVVTYNTLISK 232
R +A+ + +RD Y TL+ +
Sbjct: 339 CRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDE 372
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----R 203
M + PD +I + +A +V EM G P+ TY+ L++ + R
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLK-EPDLEKAFEMKAEMVHKGILPDADT 262
+ +G ++ M + + P+ Y LI C L E L++A E+ +M+ + PD T
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLI---CSLSMERRLDEAVEVVYDMLANSLSPDMLT 330
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMN 303
Y ++ LC R SEA ++ E + Y LM+
Sbjct: 331 YNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 10/260 (3%)
Query: 76 RIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
+++ E+ TYN L+ A+ +VD+ + + + + P++ +FN V+
Sbjct: 197 KMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKN 256
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
G + M + PD T+ LI + K K + ++ S P++ T+
Sbjct: 257 GMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTF 316
Query: 196 NRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLI--SKFCKLKEPDLEKAFEMKA 249
N +I + ++ A VF+ M + + P +TY +I +C + +A E+
Sbjct: 317 NSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC----GSVSRAREIFE 372
Query: 250 EMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEG 309
E+ + A T ++ C EA LF + V P+ TY L AY
Sbjct: 373 EVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKAD 432
Query: 310 QFSKAFHLQDEMTHKGFLPG 329
+ L +M G +P
Sbjct: 433 MKEQVQILMKKMEKDGIVPN 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 21/246 (8%)
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR-RLRLED-- 206
Q+ PD Y+ LI + KG A + SEM +SG P + YN LI L D
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKA 185
Query: 207 -AVGVFRGMTER-----DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
A+ RG ++ P+VVTYN L+ F + + D A +M + PD
Sbjct: 186 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM--SPVSPDV 243
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
T+ ++ + E + M P+ T+ L+++Y + +F K E
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM-----E 298
Query: 321 MTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY-CTV 379
T K + + P+ T+N++I ++A V + M ++ P ++Y C +
Sbjct: 299 QTFKSLMR---SKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
Query: 380 IL-GFC 384
++ G+C
Sbjct: 356 MMYGYC 361
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 21/249 (8%)
Query: 76 RIREAEQVVD-----ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
++REA + + + T+N L+ AY E +D +L ++PN +S A+++
Sbjct: 165 KLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIK 224
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
G + + +L ++ TSLI L+ G ARKV EM
Sbjct: 225 SCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQR---- 280
Query: 191 SVATYNRLIRRLRL----EDAVGVFRGMTERDLSPDVVTYNTLIS--KFCKLKEPDLEKA 244
V+ YN +IR L + ++ + +++ + + L PD T+ IS L + L+
Sbjct: 281 DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIF 340
Query: 245 FEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNA 304
MKA GI P + Y L+ L RL EA + ++M V PN + + +
Sbjct: 341 NSMKAVY---GIEPKVEHYGCLVDLLGRSGRLEEAEECIKKM---PVKPNATLWRSFLGS 394
Query: 305 YRIEGQFSK 313
+ G F +
Sbjct: 395 SQTHGDFER 403
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 10/260 (3%)
Query: 76 RIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGK 135
+++ E+ TYN L+ A+ +VD+ + + + + P++ +FN V+
Sbjct: 197 KMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKN 256
Query: 136 GRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATY 195
G + M + PD T+ LI + K K + ++ S P++ T+
Sbjct: 257 GMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTF 316
Query: 196 NRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLI--SKFCKLKEPDLEKAFEMKA 249
N +I + ++ A VF+ M + + P +TY +I +C + +A E+
Sbjct: 317 NSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC----GSVSRAREIFE 372
Query: 250 EMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEG 309
E+ + A T ++ C EA LF + V P+ TY L AY
Sbjct: 373 EVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKAD 432
Query: 310 QFSKAFHLQDEMTHKGFLPG 329
+ L +M G +P
Sbjct: 433 MKEQVQILMKKMEKDGIVPN 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 21/246 (8%)
Query: 150 QKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR-RLRLED-- 206
Q+ PD Y+ LI + KG A + SEM +SG P + YN LI L D
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKA 185
Query: 207 -AVGVFRGMTER-----DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
A+ RG ++ P+VVTYN L+ F + + D A +M + PD
Sbjct: 186 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM--SPVSPDV 243
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
T+ ++ + E + M P+ T+ L+++Y + +F K E
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM-----E 298
Query: 321 MTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY-CTV 379
T K + + P+ T+N++I ++A V + M ++ P ++Y C +
Sbjct: 299 QTFKSLMR---SKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
Query: 380 IL-GFC 384
++ G+C
Sbjct: 356 MMYGYC 361
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 122/283 (43%), Gaps = 25/283 (8%)
Query: 88 TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
T + L+ +Y D AM + M + G ++SFNA++
Sbjct: 103 TFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDE 162
Query: 148 MNQK--DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLR-- 203
Q+ ++ PD+ +Y LI +CD G P KA +++ +M G ++ + ++ L
Sbjct: 163 FPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKN 222
Query: 204 --LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDAD 261
+++A ++ M + D YN + K + P E+ E+ EM G+ PD
Sbjct: 223 GLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAK-ESP--ERVKELMEEMSSVGLKPDTV 279
Query: 262 TYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL--QD 319
+Y L+ C++ +SEA ++ + + PN T+ L+ I G + + + +
Sbjct: 280 SYNYLMTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLCINGLYDQGLTVFKKS 335
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLR 362
+ HK +P F T H+T GL R E+A GV R
Sbjct: 336 AIVHK--IPDFKTC---KHLT-----EGLVKNNRMEDARGVAR 368
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+ + +Y L+ +YC + ++AM I+R M +G++ +I+F ++ L G +
Sbjct: 170 ITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAE 229
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR-- 200
M K D Y + + K P + ++++ EM G P +YN L+
Sbjct: 230 SLWIEMVNKGCDLDNTVYNVRL-MNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAY 288
Query: 201 --RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
+ + +A V+ G+ + P+ T+ TLI C D K+ +VHK +P
Sbjct: 289 CVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHK--IP 342
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFR 284
D T + L L R+ +A + R
Sbjct: 343 DFKTCKHLTEGLVKNNRMEDARGVAR 368
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 28/202 (13%)
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISK--FCKLKE--PDLEKAFEMKAEMVHKGILPD 259
+ A+ +F M + VV++N L++ L E P L F + + I PD
Sbjct: 118 FDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQR----YNNITPD 173
Query: 260 ADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQD 319
+Y LI++ C + +A ++ R+M GV +T ++ + G +A L
Sbjct: 174 KISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWI 233
Query: 320 EMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEA----LGVLRGMPEIGLSPDAVS 375
EM +KG + +Y + L+ A+E+ ++ M +GL PD VS
Sbjct: 234 EMVNKG-------------CDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVS 280
Query: 376 YCTVILGFC---RIREPGKAYE 394
Y ++ +C + E K YE
Sbjct: 281 YNYLMTAYCVKGMMSEAKKVYE 302
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 151/354 (42%), Gaps = 52/354 (14%)
Query: 87 TTTYNALVLAYC---CDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXX 143
+T +AL+ Y CD +A + + M E+ +++++ +++ GLC G+
Sbjct: 408 STIESALLTLYSKCGCDP---DAYLVFKSMEEK----DMVAWGSLISGLCKNGKFKEALK 460
Query: 144 XXXXMNQKD--LAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M D L PD TS+ + +V MI +G +V + LI
Sbjct: 461 VFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDL 520
Query: 202 LRL----EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGIL 257
E A+ VF M+ ++ V +N++IS + + P+L + ++ M+ +GI
Sbjct: 521 YSKCGLPEMALKVFTSMSTENM----VAWNSMISCYSRNNLPEL--SIDLFNLMLSQGIF 574
Query: 258 PDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSK-AFH 316
PD+ + ++ + L + L LR G+ + L++ Y ++ FSK A +
Sbjct: 575 PDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMY-VKCGFSKYAEN 633
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
+ +M HK S +T+N +IYG G AL + M + G SPD V++
Sbjct: 634 IFKKMQHK------------SLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTF 681
Query: 377 CTVI-----LGFCRIREPGKAYEL---------KVEVDENMISWLGIWGLFEDT 416
++I GF + E +E +E NM+ LG GL E+
Sbjct: 682 LSLISACNHSGF--VEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEA 733
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 109/266 (40%), Gaps = 22/266 (8%)
Query: 119 KPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARK 178
+ +++S+N ++ G G M DL PD T +S++ +F + K ++
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 179 VLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFC 234
+ +I G V + L+ + R+ED+ VF + R D +++N+L++ +
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR----DGISWNSLVAGY- 318
Query: 235 KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
++ +A + +MV + P A + +I L L +LR G N
Sbjct: 319 -VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRA 354
+ L++ Y G A + D M V++ AII G L G
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMN------------VLDEVSWTAIIMGHALHGHG 425
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVI 380
EA+ + M G+ P+ V++ V+
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVL 451
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 51/302 (16%)
Query: 123 ISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSE 182
+S+ +++ G G + ++ KD T+T +I +A +LS+
Sbjct: 401 VSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV----TWTVMISGLVQNELFAEAASLLSD 456
Query: 183 MIDSGFSPSVATYNRLIR------RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKL 236
M+ G P +TY+ L+ L + T PD++ N+L+S + K
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKC 516
Query: 237 KEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNE 296
+E A+E+ A+MV K D ++ +I L +A +LF+EML G PN+
Sbjct: 517 GA--IEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSV 570
Query: 297 TYTGLMNAYRIEGQFSKAFHLQDEMTHK-GFLPG----------------------FVTG 333
T+ G+++A G ++ L M PG F++
Sbjct: 571 TFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISA 630
Query: 334 --FSPSHVTYNAIIYGLCLL--------GRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
F+P H Y A++ GLC L G AE A L + + +P V+ C V G
Sbjct: 631 LPFTPDHTVYGALL-GLCGLNWRDKDAEGIAERAAMRLLELDPVN-APGHVALCNVYAGL 688
Query: 384 CR 385
R
Sbjct: 689 GR 690
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 50/342 (14%)
Query: 77 IREAEQVVDE-----TTTYNALVLAYCCDERVDEAMGILRCMTER--GLKPN---LISFN 126
+REA ++ E ++ A++ + +E EA+ + M + + PN LIS
Sbjct: 247 VREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLA 306
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQ--KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI 184
GL + R ++ + + D R SL+H++ G A+ +L+E
Sbjct: 307 YACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF 366
Query: 185 DSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLS-PDVVTYNTLISKFCKLKEPDLEK 243
D NR ++ LE A +F ER S D V++ ++I + L+ D+ +
Sbjct: 367 D--LQSCNIIINRYLKNGDLERAETLF----ERVKSLHDKVSWTSMIDGY--LEAGDVSR 418
Query: 244 AFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMN 303
AF + ++ K D T+ +I L + +EA L +M+R G+ P N TY+ L++
Sbjct: 419 AFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
Query: 304 AYRIEGQFSKAFH-----------------LQDEMTHKGFLPG--------FVTGFSPSH 338
+ + H LQ+ + G F
Sbjct: 475 SAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDT 534
Query: 339 VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
V++N++I GL G A++AL + + M + G P++V++ V+
Sbjct: 535 VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVL 576
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 39/254 (15%)
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDVVTYNTLIS 231
AR +L ++ G V + L+ + L++A +F M ER+ +VT N +++
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERN----IVTCNAMLT 116
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
+ K + + +A+ + EM + ++ ++ LC R +A +LF EM V
Sbjct: 117 GYVKCRR--MNEAWTLFREMPKNVV-----SWTVMLTALCDDGRSEDAVELFDEMPERNV 169
Query: 292 SPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLL 351
N TGL+ G KA + D M + V++NA+I G
Sbjct: 170 VSWNTLVTGLIR----NGDMEKAKQVFDAMPSRDV------------VSWNAMIKGYIEN 213
Query: 352 GRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE-NMISWLGIW 410
EEA + M E + V++ +++ G+CR + +AY L E+ E N++SW +
Sbjct: 214 DGMEEAKLLFGDMSE----KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMI 269
Query: 411 GLF---EDTRKSLM 421
F E R++LM
Sbjct: 270 SGFAWNELYREALM 283
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 80 AEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMX 139
A+ V +T ++N++++ D+A+ + + M + G KPN ++F V+ G +
Sbjct: 527 AKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLIT 586
Query: 140 XXXXXXXXMNQK-DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRL 198
M + + P Y S+I L G +A + +S + F+P Y L
Sbjct: 587 RGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL---PFTPDHTVYGAL 643
Query: 199 I----RRLRLEDAVGVFRGMTERDLSPDVVT---YNTLISKFCKLKEPDLEKAFEMKAEM 251
+ R +DA G+ R L D V + L + + L D+EK EM+ EM
Sbjct: 644 LGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEK--EMRKEM 701
Query: 252 VHKGI 256
KG+
Sbjct: 702 GIKGV 706
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Query: 173 PGKARKVLSEMIDSGFS-PSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
P +++ +M GF+ +V ++ L + R +A+ +F + +++ PDVV + ++
Sbjct: 181 PKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVE 240
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRL-SEAYDLFREMLRWG 290
+ + ++ ++ M+ G+ P+A TY LI+ L + +A EM+ G
Sbjct: 241 AYANAGQ--AKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNG 298
Query: 291 VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP 328
+SPN TYT + A+ EG+ A L EM KGF+P
Sbjct: 299 MSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVP 336
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Query: 128 VVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG 187
+ L GR + K+ PD +T+++ + + G + KV M+ SG
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 188 FSPSVATYNRLIRRLRLE-----DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLE 242
SP+ TY+ LI+ L + DA M +SP+ TY + F ++E E
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAF--VREGKEE 320
Query: 243 KAFEMKAEMVHKGILPD 259
A E+ EM KG +PD
Sbjct: 321 SARELLQEMKGKGFVPD 337
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 12/163 (7%)
Query: 210 VFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRT 269
+F M + + V +SK + E A E+ +++ K +PD + ++
Sbjct: 187 IFHKMRTEGFTNEAVKMFDALSKDGRTHE-----ALELFSQIKDKNRMPDVVAHTAIVEA 241
Query: 270 LCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG 329
+ E +F ML GVSPN TY+ L+ +G+ K K L
Sbjct: 242 YANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKD-------AKKYLLEM 294
Query: 330 FVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
G SP+ TY A+ G+ E A +L+ M G PD
Sbjct: 295 MGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
+ + A+V AY + E + + M G+ PN +++ +++GL G+
Sbjct: 231 DVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKY 290
Query: 146 -XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
M ++P+ TYT++ F +G AR++L EM GF P
Sbjct: 291 LLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVP 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 266 LIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG 325
+ L R EA +LF ++ P+ +T ++ AY GQ + T K
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKE--------TLKV 254
Query: 326 FLPGFVTGFSPSHVTYNAIIYGLCLLGRA-EEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
F+ +G SP+ TY+ +I GL G+ ++A L M G+SP+A +Y V F
Sbjct: 255 FMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFV 314
Query: 385 RIREPGKAYEL 395
R + A EL
Sbjct: 315 REGKEESAREL 325
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 131/310 (42%), Gaps = 38/310 (12%)
Query: 47 SESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETT-----TYNALVLAYCCDE 101
+E++K + + G+ + S S +EA Q+ DE + ++N LV Y +
Sbjct: 34 NEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNR 93
Query: 102 RVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYT 161
+ EA + M ER N++S+ A+V+G +G + M +++ E ++T
Sbjct: 94 MIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLFWRMPERN----EVSWT 145
Query: 162 SLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSP 221
+ D G KARK+ M S L R R+++A +F M ER+
Sbjct: 146 VMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN--- 202
Query: 222 DVVTYNTLISKFCKLKEPDL-EKAFEMKAEMVH------------KGILPDADTY----- 263
VVT+ T+I+ + + D+ K FE+ E G + DA+ +
Sbjct: 203 -VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP 261
Query: 264 -EPLIRTLCLQQRLSEAYDL--FREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDE 320
+P+I + E ++ R + +N T+ G++ AY +G +A L +
Sbjct: 262 MKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQ 321
Query: 321 MTHKGFLPGF 330
M +G P F
Sbjct: 322 MQKQGVRPSF 331
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 123/314 (39%), Gaps = 38/314 (12%)
Query: 96 AYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCG--KGRMXXXXXXXXXMNQKDL 153
A E V A + R +T P+ FN +++ +C + M ++ +
Sbjct: 57 ASASKEVVSYATSVFRFITN----PSTFCFNTIIR-ICTLHEPSSLSSKRFFVEMRRRSV 111
Query: 154 APDERTYTSLIHLFCDK--GHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVF 211
PD T+ + K G + + + + G + T N LIR L +
Sbjct: 112 PPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSA 171
Query: 212 RGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLC 271
+ + + DVVTYN LI K +E + +A E+ M L D ++ LI
Sbjct: 172 LQLFDENPQRDVVTYNVLIDGLVKARE--IVRARELFDSMP----LRDLVSWNSLISGYA 225
Query: 272 LQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKG-FLPGF 330
EA LF EM+ G+ P+N ++A G + K + D K F+ F
Sbjct: 226 QMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSF 285
Query: 331 VT----------GFSPSHV------------TYNAIIYGLCLLGRAEEALGVLRGMPEIG 368
+ GF + + T+NA+I GL + G E + R M G
Sbjct: 286 LATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSG 345
Query: 369 LSPDAVSYCTVILG 382
+ PD V++ +V++G
Sbjct: 346 IKPDGVTFISVLVG 359
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 18/266 (6%)
Query: 76 RIREAEQV---------VDETTTYNALVLAYCCDERVDEAM-GILRCMTERGLKPNLISF 125
RI EA +V V T NAL+L + E + IL G++ +F
Sbjct: 123 RIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTF 182
Query: 126 NAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKV--LSEM 183
++ LC G + M+Q + D R Y+ L+ C + L ++
Sbjct: 183 GILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDL 242
Query: 184 IDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP 239
+ FSP + Y ++R L R ++ V V M + PD+V Y ++ + +
Sbjct: 243 RKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGV--IADE 300
Query: 240 DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT 299
D KA ++ E++ G+ PD TY I LC Q + A + M + G PN TY
Sbjct: 301 DYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYN 360
Query: 300 GLMNAYRIEGQFSKAFHLQDEMTHKG 325
L+ A G S+A L EM G
Sbjct: 361 ILIKALVKAGDLSRAKTLWKEMETNG 386
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 27/238 (11%)
Query: 207 AVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPL 266
A + R M++ + D Y+ L+S CK K+ ++ P Y +
Sbjct: 198 ATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVV 257
Query: 267 IRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGF 326
+R L R E + +M V P+ YT ++ + + KA L DE+
Sbjct: 258 MRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELL---- 313
Query: 327 LPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRI 386
+ G +P TYN I GLC E AL ++ M ++G P+ V+Y +I +
Sbjct: 314 ----LLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKA 369
Query: 387 REPGKAYELKVEVDENMISWLGIWGLFEDTRKSLMQGLSNEDTFSSLMNDYLAQDESV 444
+ +A L E++ N ++ N TF +++ Y+ DE V
Sbjct: 370 GDLSRAKTLWKEMETNGVN-------------------RNSHTFDIMISAYIEVDEVV 408
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 20/266 (7%)
Query: 119 KPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARK 178
+P + +NA+++G M ++PD T+ L+ H R
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 179 VLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFC 234
V +++ GF V N LI + RL A VF G+ + + +V++ ++S +
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT--IVSWTAIVSAYA 198
Query: 235 KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
+ EP +A E+ ++M + PD ++ Q L + + +++ G+
Sbjct: 199 QNGEP--MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 295 NETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRA 354
+ L Y GQ + A L D+M SP+ + +NA+I G G A
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMK------------SPNLILWNAMISGYAKNGYA 304
Query: 355 EEALGVLRGMPEIGLSPDAVSYCTVI 380
EA+ + M + PD +S + I
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAI 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 90/247 (36%), Gaps = 47/247 (19%)
Query: 120 PNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKV 179
PNLI +NA++ G G M KD+ PD + TS I G +AR +
Sbjct: 286 PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
Query: 180 LSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEP 239
+ S + V + LI +V R + +R L DVV ++ +I +
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYG----- 400
Query: 240 DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYT 299
L R EA L+R M R GV PN+ T+
Sbjct: 401 --------------------------------LHGRAREAISLYRAMERGGVHPNDVTFL 428
Query: 300 GLMNAYRIEGQFSKAFHLQDEMT-HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEAL 358
GL+ A G + + + M HK +P Y +I L G ++A
Sbjct: 429 GLLMACNHSGMVREGWWFFNRMADHK---------INPQQQHYACVIDLLGRAGHLDQAY 479
Query: 359 GVLRGMP 365
V++ MP
Sbjct: 480 EVIKCMP 486
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 103/261 (39%), Gaps = 14/261 (5%)
Query: 122 LISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLS 181
++S+ A+V G M + D+ PD S+++ F + R + +
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 182 EMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
++ G L V + + ++ SP+++ +N +IS + K
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK--NGYA 304
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGL 301
+A +M EM++K + PD + I L +A ++ + R + + L
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 302 MNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVL 361
++ + G A + D + V ++A+I G L GRA EA+ +
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDV------------VVWSAMIVGYGLHGRAREAISLY 412
Query: 362 RGMPEIGLSPDAVSYCTVILG 382
R M G+ P+ V++ +++
Sbjct: 413 RAMERGGVHPNDVTFLGLLMA 433
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 27/242 (11%)
Query: 174 GKARK------VLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRG-----------MTE 216
GKA+K + +++D G P+ +Y ++ + + RG M +
Sbjct: 392 GKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMED 451
Query: 217 RDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRL 276
+ L P +N ++ K E A ++ MV G P +Y L+ L +
Sbjct: 452 KGLKPQRRHWNAVLVACSKASETT--AAIQIFKAMVDNGEKPTVISYGALLSALEKGKLY 509
Query: 277 SEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSP 336
EA+ ++ M++ G+ PN YT + + + +F+ L EM K G P
Sbjct: 510 DEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASK--------GIEP 561
Query: 337 SHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELK 396
S VT+NA+I G G + A M + P+ ++Y +I +P AYEL
Sbjct: 562 SVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELH 621
Query: 397 VE 398
V+
Sbjct: 622 VK 623
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 16/264 (6%)
Query: 75 RRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLIS-------FNA 127
+RIRE + + N L+ ++ A+ I + + G +PN +S FN
Sbjct: 370 KRIRERFSEIS-LSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNI 428
Query: 128 VVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSG 187
++ +G M K L P R + +++ A ++ M+D+G
Sbjct: 429 LLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNG 488
Query: 188 FSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEK 243
P+V +Y L+ L ++A V+ M + + P++ Y T+ S ++ +L
Sbjct: 489 EKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLD 548
Query: 244 AFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE-AYDLFREMLRWGVSPNNETYTGLM 302
+ EM KGI P T+ +I + C + LS AY+ F M V PN TY L+
Sbjct: 549 T--LLKEMASKGIEPSVVTFNAVI-SGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLI 605
Query: 303 NAYRIEGQFSKAFHLQDEMTHKGF 326
A + + A+ L + ++G
Sbjct: 606 EALANDAKPRLAYELHVKAQNEGL 629
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 8/217 (3%)
Query: 58 LLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERG 117
LL A +++G+ V E + + + +NA+++A A+ I + M + G
Sbjct: 429 LLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNG 488
Query: 118 LKPNLISFNAVVQGLCGKGRMXXXX-XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKA 176
KP +IS+ A++ L KG++ M + + P+ YT++ + +
Sbjct: 489 EKPTVISYGALLSAL-EKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLL 547
Query: 177 RKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGV----FRGMTERDLSPDVVTYNTLISK 232
+L EM G PSV T+N +I GV F M ++ P+ +TY LI
Sbjct: 548 DTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEA 607
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRT 269
+P L A+E+ + ++G+ + Y+ ++++
Sbjct: 608 LANDAKPRL--AYELHVKAQNEGLKLSSKPYDAVVKS 642
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 19/271 (7%)
Query: 45 LQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVD 104
L ++KK A E+ + ++G E N++S E VV + +N L+ A
Sbjct: 390 LMGKAKKWWAALEIYEDLLDEGPEPNNLS------YELVV---SHFNILLSAASKRGIWR 440
Query: 105 EAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLI 164
+ +L M ++GLKP +NAV+ M P +Y +L+
Sbjct: 441 WGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALL 500
Query: 165 HLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI------RRLRLEDAVGVFRGMTERD 218
+A +V + MI G P++ Y + ++ L D + + M +
Sbjct: 501 SALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTL--LKEMASKG 558
Query: 219 LSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSE 278
+ P VVT+N +IS + + A+E M + + P+ TYE LI L +
Sbjct: 559 IEPSVVTFNAVISGCARNGLSGV--AYEWFHRMKSENVEPNEITYEMLIEALANDAKPRL 616
Query: 279 AYDLFREMLRWGVSPNNETYTGLMNAYRIEG 309
AY+L + G+ +++ Y ++ + G
Sbjct: 617 AYELHVKAQNEGLKLSSKPYDAVVKSAETYG 647
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Query: 163 LIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTER- 217
+I F + K +L EM + P V TYN ++ R + + +GV M E
Sbjct: 183 IIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDC 242
Query: 218 DLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLS 277
+S +++TYNT+++ K D+ + EMV GI PD +Y +I +L +
Sbjct: 243 SVSVNIITYNTVLNGMRKACRFDM--CLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVK 300
Query: 278 EAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFL 327
E+ LF EM + + P+ Y L++ + G F A L DE+ + L
Sbjct: 301 ESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTSSL 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 91 NALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQ 150
N ++ A+ ++D+ + IL+ M E KP++I++N+V+ L G + M +
Sbjct: 181 NRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKE 240
Query: 151 K-DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLE 205
++ + TY ++++ + +EM+ G P + +Y +I L ++
Sbjct: 241 DCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVK 300
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEM 251
+++ +F M +R + P V Y LI C K D + A ++ E+
Sbjct: 301 ESLRLFDEMKQRQIRPSVYVYRALID--CLKKSGDFQSALQLSDEL 344
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 117/288 (40%), Gaps = 23/288 (7%)
Query: 33 NVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNS------VSGRRIREAEQVVDE 86
N +I G+ G+L+ S K +GV + + + +++ AE + +
Sbjct: 190 NAMISGYIECGDLEKAS-------HFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKD 242
Query: 87 TT------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
T T+NA++ Y + R ++ + + R M E G++PN ++ + G +
Sbjct: 243 MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL 302
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
+++ L D TSLI ++C G G A K+ M A + +
Sbjct: 303 GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQ 362
Query: 201 RLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDA 260
+ A+ +FR M + + PD +T+ ++ ++ A+ ++ + + P
Sbjct: 363 HGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY-FESMVRDYKVEPQP 421
Query: 261 DTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIE 308
D Y ++ L +L EA L R M P+ + L+ A R+
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKLIRSM---PFRPHAAVFGTLLGACRVH 466
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 30/312 (9%)
Query: 76 RIREAEQVVDE-----TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
R+ EA Q+ DE T +YN ++ Y + ++A M + + S+N ++
Sbjct: 108 RMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMIT 163
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
G +G M M +K+ E ++ ++I + + G KA G
Sbjct: 164 GYARRGEMEKARELFYSMMEKN----EVSWNAMISGYIECGDLEKASHFFKVAPVRGVVA 219
Query: 191 SVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAE 250
A ++ ++E A +F+ MT ++ ++VT+N +IS + + P E ++
Sbjct: 220 WTAMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRP--EDGLKLFRA 274
Query: 251 MVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQ 310
M+ +GI P++ + L + + + + + + T L++ Y G+
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGE 334
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
A+ L + M K V +NA+I G G A++AL + R M + +
Sbjct: 335 LGDAWKLFEVMKKKDV------------VAWNAMISGYAQHGNADKALCLFREMIDNKIR 382
Query: 371 PDAVSYCTVILG 382
PD +++ V+L
Sbjct: 383 PDWITFVAVLLA 394
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 165/388 (42%), Gaps = 46/388 (11%)
Query: 32 PNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKG-VESNS-----VSGRRIREAEQVVD 85
PN +I ++ G L V A +L + +E+ V NS V +R+A ++ D
Sbjct: 155 PNALIDCYSRCGGL-----GVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFD 209
Query: 86 ET-----TTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXX 140
E ++N ++ Y + +A + M ER N +S++ +V G G M
Sbjct: 210 EMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEM 265
Query: 141 XXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR 200
M A + T+T +I + +KG +A +++ +M+ SG A ++
Sbjct: 266 ARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 201 RLR----LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
L + + + +L + N L+ + K +L+KAF++ ++ K +
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG--NLKKAFDVFNDIPKKDL 381
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFH 316
+ ++ ++ L + EA +LF M R G+ P+ T+ ++ + G
Sbjct: 382 V----SWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAG------- 430
Query: 317 LQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSY 376
L DE + V P Y ++ L +GR +EA+ V++ MP + P+ V +
Sbjct: 431 LIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP---MEPNVVIW 487
Query: 377 CTVILGFCRIREPGKAYELKVEVDENMI 404
+LG CR+ ++ EV +N++
Sbjct: 488 -GALLGACRMH---NEVDIAKEVLDNLV 511
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 29/238 (12%)
Query: 172 HPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLIS 231
H R+ L E D +P + + L R+ L AV VF + E P+V N+LI
Sbjct: 39 HAQIIRRNLHE--DLHIAPKLISALSLCRQTNL--AVRVFNQVQE----PNVHLCNSLIR 90
Query: 232 KFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGV 291
+ +P +AF + +EM G+ D TY L++ Q L + + + G+
Sbjct: 91 AHAQNSQP--YQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGL 148
Query: 292 SPNNETYTGLMNAYRIEGQFS--KAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLC 349
S + L++ Y G A L ++M+ + V++N+++ GL
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER------------DTVSWNSMLGGLV 196
Query: 350 LLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDE-NMISW 406
G +A + MP+ D +S+ T++ G+ R RE KA+EL ++ E N +SW
Sbjct: 197 KAGELRDARRLFDEMPQ----RDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSW 250
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 128/304 (42%), Gaps = 37/304 (12%)
Query: 88 TTYNALVLAYC-CDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXX 146
++N L+ Y C E M + R + + N +S+ ++ G G +
Sbjct: 233 ASWNILIGGYVNCRE-----MKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFR 287
Query: 147 XMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMI--DSGFSP------SVATYNRL 198
M++KD + Y ++I + G P A K+ ++M+ +S P SV + N
Sbjct: 288 LMSKKD----KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQ 343
Query: 199 IRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILP 258
+ V + +TE + D + +LI + +K D KAF+M + + K
Sbjct: 344 LGNTSFGTWVESY--ITEHGIKIDDLLSTSLIDLY--MKGGDFAKAFKMFSNLNKK---- 395
Query: 259 DADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQ 318
D +Y +I + +EA LF M+ + PN T+TGL++AY G + +
Sbjct: 396 DTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCF 455
Query: 319 DEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCT 378
+ M P S H Y ++ L GR EEA +++ MP + P+A +
Sbjct: 456 NSMKDHNLEP------SADH--YGIMVDMLGRAGRLEEAYELIKSMP---MQPNAGVWGA 504
Query: 379 VILG 382
++L
Sbjct: 505 LLLA 508
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 25/269 (9%)
Query: 119 KP-NLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLA-PDERTYTSLIHLFCDKGHPGKA 176
KP N+ +N +++G G M L PD TY LI
Sbjct: 81 KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140
Query: 177 RKVLSEMIDSGFSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDVVTYNTLISK 232
+ S +I SGF + N L+ + A VF M E+DL V +N++I+
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL----VAWNSVING 196
Query: 233 FCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVS 292
F + +P E+A + EM KGI PD T L+ L+ + M++ G++
Sbjct: 197 FAENGKP--EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 293 PNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLG 352
N + L++ Y G+ +A L DEM K + V++ ++I GL + G
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK------------NSVSWTSLIVGLAVNG 302
Query: 353 RAEEALGVLRGMPEI-GLSPDAVSYCTVI 380
+EA+ + + M GL P +++ ++
Sbjct: 303 FGKEAIELFKYMESTEGLLPCEITFVGIL 331
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 116/297 (39%), Gaps = 25/297 (8%)
Query: 161 TSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLS 220
SL+HL+ + G A KV +M + + N + E+A+ ++ M + +
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 221 PDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAY 280
PD T +L+S K+ L K + M+ G+ + + L+ R+ EA
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGK--RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 281 DLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVT 340
LF EM V N+ ++T L+ + G +A L M G P +T
Sbjct: 278 TLFDEM----VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES-------TEGLLPCEIT 326
Query: 341 YNAIIYGLCLLGRAEEALGVLRGM-PEIGLSPDAVSYCTVILGFCRIREPGKAYEL--KV 397
+ I+Y G +E R M E + P + ++ R + KAYE +
Sbjct: 327 FVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386
Query: 398 EVDENMISWLGIWG---------LFEDTRKSLMQGLSNEDTFSSLMNDYLAQDESVS 445
+ N++ W + G L E R ++Q N L+++ A ++ S
Sbjct: 387 PMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 113/291 (38%), Gaps = 24/291 (8%)
Query: 99 CDERVDEAMG--ILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPD 156
C D MG + + + E+ L + NA+V GRM M ++D+
Sbjct: 228 CGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVI-- 285
Query: 157 ERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIR----RLRLEDAVGVFR 212
T+T +I+ + + G A ++ M G P+ T L+ L++ D +
Sbjct: 286 --TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHG 343
Query: 213 GMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCL 272
+ + D++ +LIS + K K DL A H G + +I
Sbjct: 344 WAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTG------PWSAIIAGCVQ 397
Query: 273 QQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVT 332
+ +S+A LF+ M R V PN T L+ AY +A ++ +T GF+
Sbjct: 398 NELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDA 457
Query: 333 GFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGF 383
HV Y C G E A + G+ E S D V + +I G+
Sbjct: 458 ATGLVHV------YSKC--GTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 126/317 (39%), Gaps = 36/317 (11%)
Query: 27 NRLSPPNVIIRGFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVS------------- 73
+R+ +VI +T + N +E V A EL + +GV N+V+
Sbjct: 277 DRMERRDVIT--WTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALK 334
Query: 74 --------GRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISF 125
G +R+ QV + +L+ Y +RVD + ++ P +
Sbjct: 335 VNDGKCLHGWAVRQ--QVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----W 388
Query: 126 NAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMID 185
+A++ G + M ++D+ P+ T SL+ + +A + +
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK 448
Query: 186 SGFSPSVATYNRLIRRLR----LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDL 241
+GF S+ L+ LE A +F G+ E+ S DVV + LIS + D
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM--HGDG 506
Query: 242 EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREML-RWGVSPNNETYTG 300
A ++ EMV G+ P+ T+ + + E LFR ML + + YT
Sbjct: 507 HNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTC 566
Query: 301 LMNAYRIEGQFSKAFHL 317
+++ G+ +A++L
Sbjct: 567 IVDLLGRAGRLDEAYNL 583
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 109 ILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFC 168
I + M E GL PN + A++ GLC G + M K P+ YT+++ FC
Sbjct: 121 IFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 169 DKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVV 224
A+++ +M ++G +P+ +Y L++ L L+DAV M E SP+V
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 225 TYNTLISKFCKLK 237
T+ L+ C++K
Sbjct: 238 TFVELVDALCRVK 250
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
A++ C D V EAM + M ++G P ++ + AVV+ C ++ M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
+AP+ +Y L+ + A SEM++SG SP+V T+ L+ L
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDAL 246
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
ED+ +F+ M E L P+ V ++ CK + +++A ++ M KG +P+ Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCK--DGLVQEAMKLFGLMRDKGTIPEVVIYT 170
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
++ C ++ +A +FR+M G++PN +Y L+ A EM
Sbjct: 171 AVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLE- 229
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
+G SP+ T+ ++ LC + E+A + + + G +
Sbjct: 230 -------SGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+ E Y A+V A+C ++++A I R M G+ PN S+ +VQGL +
Sbjct: 162 TIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAV 221
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M + +P+ T+ L+ C +A+ + + GF+ +V + +
Sbjct: 222 AFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 280
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 109 ILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFC 168
I + M E GL PN + A++ GLC G + M K P+ YT+++ FC
Sbjct: 121 IFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 169 DKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRGMTERDLSPDVV 224
A+++ +M ++G +P+ +Y L++ L L+DAV M E SP+V
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 225 TYNTLISKFCKLK 237
T+ L+ C++K
Sbjct: 238 TFVELVDALCRVK 250
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
A++ C D V EAM + M ++G P ++ + AVV+ C ++ M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL 202
+AP+ +Y L+ + A SEM++SG SP+V T+ L+ L
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDAL 246
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
ED+ +F+ M E L P+ V ++ CK + +++A ++ M KG +P+ Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCK--DGLVQEAMKLFGLMRDKGTIPEVVIYT 170
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
++ C ++ +A +FR+M G++PN +Y L+ A EM
Sbjct: 171 AVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLE- 229
Query: 325 GFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
+G SP+ T+ ++ LC + E+A + + + G +
Sbjct: 230 -------SGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%)
Query: 83 VVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXX 142
+ E Y A+V A+C ++++A I R M G+ PN S+ +VQGL +
Sbjct: 162 TIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAV 221
Query: 143 XXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRR 201
M + +P+ T+ L+ C +A+ + + GF+ +V + +
Sbjct: 222 AFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 280
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 38/254 (14%)
Query: 80 AEQVVDETTTYN--ALVLAYCCDERVDEAMGILRCM-TERGLKPNLISFNAVVQGLCGKG 136
E +D T Y+ +V CC+ + A ++ M +G+K N+++F +++ +
Sbjct: 201 VESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRW 260
Query: 137 RMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYN 196
M ++ + D +Y LI F G +A +++ M D
Sbjct: 261 DFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHD----------- 309
Query: 197 RLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI 256
++LR+E + YN +++ + + +EK E+ +EM +G+
Sbjct: 310 ---KKLRVESYL-----------------YNLIMNGYSRFGL--VEKVIELYSEMSSRGV 347
Query: 257 LPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLM-NAYRIEGQFSKAF 315
P+ DTY L+ LC ++ EA E+ + E Y+ L YR+ G K+
Sbjct: 348 TPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRV-GMIDKSL 406
Query: 316 HLQDEMTHKGFLPG 329
+ EM GF+PG
Sbjct: 407 EVVAEMIRDGFIPG 420
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 34/252 (13%)
Query: 125 FNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLF----CDKGHPGKARKVL 180
FN+++ G+ M ++ DE+T T +HL CD+ AR
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCT--LHLLNLKRCDQMEL--ARDFF 197
Query: 181 SEMIDSGFSP----------SVATYNRLIRRLR-LEDAVGVFRGMTERDLSPDVVTYNTL 229
S M++SG +V N I R R L + +G+ +G + ++VT+ ++
Sbjct: 198 SLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKG-----VKANIVTFKSM 252
Query: 230 ISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRW 289
I C +K D E+ + M + ++ D D+Y+ LI ++ EA L M
Sbjct: 253 IG--CCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDK 310
Query: 290 GVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLC 349
+ + Y +MN Y G K L EM+ +G +P+ TY ++ GLC
Sbjct: 311 KLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGV--------TPNKDTYWVLMNGLC 362
Query: 350 LLGRAEEALGVL 361
G+ EA+ L
Sbjct: 363 KAGKVCEAMSFL 374
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 33/283 (11%)
Query: 92 ALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQK 151
+V Y R+ +A + M+ER N++ +N +++G C G + M+++
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSER----NVVVWNLMIRGFCDSGDVERGLHLFKQMSER 197
Query: 152 DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVF 211
+ ++ S+I G +A ++ EMID GF P AT ++ L + ++GV
Sbjct: 198 SIV----SWNSMISSLSKCGRDREALELFCEMIDQGFDPDEAT---VVTVLPISASLGVL 250
Query: 212 -------RGMTERDLSPDVVTY-NTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
L D +T N L+ +C K DLE A + +M + ++ ++
Sbjct: 251 DTGKWIHSTAESSGLFKDFITVGNALVDFYC--KSGDLEAATAIFRKMQRRNVV----SW 304
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWG-VSPNNETYTGLMNAYRIEGQFSKAFHLQDEMT 322
LI + + DLF M+ G V+PN T+ G++ GQ + L M
Sbjct: 305 NTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMM 364
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMP 365
+ F H Y A++ + GR EA L+ MP
Sbjct: 365 ER-----FKLEARTEH--YGAMVDLMSRSGRITEAFKFLKNMP 400
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 21/180 (11%)
Query: 220 SPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEA 279
+P+V+ +N +I K L P LE + + M +GI D TY PL+++ L
Sbjct: 64 NPNVLVFNAMI-KCYSLVGPPLE-SLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFG 121
Query: 280 YDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPG--FVTGFSPS 337
+ E++R G + G++ Y G+ A + DEM+ + + + GF S
Sbjct: 122 KCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDS 181
Query: 338 H-----------------VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
V++N++I L GR EAL + M + G PD + TV+
Sbjct: 182 GDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 16/247 (6%)
Query: 89 TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXM 148
T+ ++ + + + M G N+ + N V+ LC K ++
Sbjct: 148 TFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLC-KEKLVEEAKFVFIK 206
Query: 149 NQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNR----LIRRLRL 204
++ + PDE TY ++I FCD G +A K+ + M+D GF + + L+++ +
Sbjct: 207 LKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQF 266
Query: 205 EDAVGVFRGM-TERDLSPDVVTYNTLISKFCKLKEPDL-EKAFEMKAEMVHKGILPDADT 262
++A VF M ++R D Y +I CK D+ K F+ EM +G+ D T
Sbjct: 267 DEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFD---EMRERGVYVDNLT 323
Query: 263 YEPLIRTLCLQQRLSEAYDLFREMLRWGV-SPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+ LI L +++R+ EAY L GV +P+ Y GL+ + S+A + +M
Sbjct: 324 WASLIYGLLVKRRVVEAYGLVE-----GVENPDISIYHGLIKGLVKIKRASEATEVFRKM 378
Query: 322 THKGFLP 328
+G P
Sbjct: 379 IQRGCEP 385
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 7/195 (3%)
Query: 77 IREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKG 136
I+ E + + TY ++ +C + EA + M + G ++ + +++ L K
Sbjct: 205 IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKN 264
Query: 137 RMXXXXXXXXXMNQK---DLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVA 193
+ M K DL D Y +I C G ARKV EM + G
Sbjct: 265 QFDEASKVFYVMVSKRGGDL--DGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNL 322
Query: 194 TYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVH 253
T+ LI L ++ V G+ E +PD+ Y+ LI K+K +A E+ +M+
Sbjct: 323 TWASLIYGLLVKRRVVEAYGLVEGVENPDISIYHGLIKGLVKIKRAS--EATEVFRKMIQ 380
Query: 254 KGILPDADTYEPLIR 268
+G P TY L++
Sbjct: 381 RGCEPIMHTYLMLLQ 395
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 121/315 (38%), Gaps = 49/315 (15%)
Query: 77 IREAEQVVDETT------TYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
++ AE V+DE + Y+ L+ + + +++ IL+ M++ G+ P++++ A+V
Sbjct: 368 LKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVH 427
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP 190
G + L PDE+ Y ++I + + G P +++ E
Sbjct: 428 MYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKE-------- 479
Query: 191 SVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAE 250
M ++L Y L+ + ++ + + +
Sbjct: 480 -----------------------MQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQ 516
Query: 251 MVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQ 310
G L + Y + ++ +A F EM + G P+++ L+ AY+ E
Sbjct: 517 YASDGPL-SFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENS 575
Query: 311 FSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLS 370
KA L ++ G G +TY ++ + LG EEA +L + ++G +
Sbjct: 576 LDKALRLLLQLEKDGIEIGV--------ITYTVLVDWMANLGLIEEAEQLLVKISQLGEA 627
Query: 371 PD---AVSYCTVILG 382
P VS C + G
Sbjct: 628 PPFELQVSLCCMYSG 642
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 22/237 (9%)
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----R 203
+ Q + P+ T++S + P ++VL + G + + + N +I R
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 204 LEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTY 263
+EDA F ++E++L V+YNT + C + + E+AF++ +E+ + + A T+
Sbjct: 424 MEDAQRAFESLSEKNL----VSYNTFLDGTC--RNLNFEQAFKLLSEITERELGVSAFTF 477
Query: 264 EPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTH 323
L+ + + + + ++++ G+S N L++ Y G A + + M +
Sbjct: 478 ASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN 537
Query: 324 KGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVI 380
+ +++ ++I G G A L M E G+ P+ V+Y ++
Sbjct: 538 RNV------------ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAIL 582
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 119/289 (41%), Gaps = 35/289 (12%)
Query: 38 GFTAVGNLQSESKKVGGAFELLKAGTEKGVESNSVSGRRIREAEQVVDETTTYNALVLAY 97
F A GNL +VG ++L ++G+ SNS + N+++ +
Sbjct: 379 AFKACGNLSD--PRVGK--QVLGQAFKRGLASNS----------------SVANSVISMF 418
Query: 98 CCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDE 157
+R+++A ++E+ NL+S+N + G C + +++L
Sbjct: 419 VKSDRMEDAQRAFESLSEK----NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 158 RTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRL----RLEDAVGVFRG 213
T+ SL+ + G K ++ S+++ G S + N LI ++ A VF
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 214 MTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQ 273
M R +V+++ ++I+ F K + E +M+ +G+ P+ TY ++
Sbjct: 535 MENR----NVISWTSMITGFA--KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
Query: 274 QRLSEAYDLFREMLR-WGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEM 321
+SE + F M + P E Y +++ G + AF + M
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM 637
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 41/312 (13%)
Query: 105 EAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLI 164
+A + M ER NL+S+ +V+ G G+ M Q+DL PD+ + S+I
Sbjct: 120 DAREVFDFMPER----NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSII 175
Query: 165 HLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLI----RRLRLEDAVGVFRGMTERDLS 220
G +++ +++I S + N LI R ++ DA VF G+ +DL
Sbjct: 176 KACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDL- 234
Query: 221 PDVVTYNTLISKFCKLKEPDLEKAFEMKA-----EMVHKGIL-PDADTYEPLIRTLCLQQ 274
++++++I+ F +L FE +A EM+ G+ P+ + ++
Sbjct: 235 ---ISWSSIIAGFSQL-------GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLL 284
Query: 275 RLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGF 334
R + ++ ++ N L + Y G + A + D++
Sbjct: 285 RPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIER----------- 333
Query: 335 SPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYE 394
P ++N II GL G A+EA+ V M G PDA+S +++ C +P A
Sbjct: 334 -PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL---CAQTKP-MALS 388
Query: 395 LKVEVDENMISW 406
+++ +I W
Sbjct: 389 QGMQIHSYIIKW 400
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 121/312 (38%), Gaps = 38/312 (12%)
Query: 119 KPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHP---GK 175
+P+ S+N ++ GL G M PD SL L C + P +
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDA---ISLRSLLCAQTKPMALSQ 389
Query: 176 ARKVLSEMIDSGFSPSVATYNRLIRRLRL-EDAVGVFRGMTERDLSPDVVTYNTLISKFC 234
++ S +I GF + N L+ D F + + D V++NT+++
Sbjct: 390 GMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACL 449
Query: 235 KLKEP-DLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSP 293
+ ++P ++ + F++ M+ PD T L+R L + L+ G++P
Sbjct: 450 QHEQPVEMLRLFKL---MLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAP 506
Query: 294 NNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLP-----------GF------------ 330
GL++ Y G +A + D M ++ + GF
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK 566
Query: 331 VTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGM-PEIGLSPDAVSYCTVILGFCRIREP 389
G P+HVT+ ++ +G EE L + M E G+SP +C+ ++ +
Sbjct: 567 SAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTK-EHCSCVVDL--LARA 623
Query: 390 GKAYELKVEVDE 401
G+ E + +DE
Sbjct: 624 GRLNEAERFIDE 635
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 131/307 (42%), Gaps = 26/307 (8%)
Query: 77 IREAEQVVDETTT-----YNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQG 131
I +A++V D T +N L+ AY EA+ + M G+ PN+I++N ++
Sbjct: 426 IVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILS 485
Query: 132 LCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPS 191
L G++ M + P+ ++T++++ G +A L +M +SG P+
Sbjct: 486 LLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Query: 192 VATYNRLIRRLRLEDAVGVFR---GMTERDL--SPDVVTYNTLISKFCKLKEPDLEKAFE 246
+ + ++ + R G R+L S V +L+ + K D+ KA +
Sbjct: 546 AFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKC--GDINKAEK 603
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
+ ++ LP ++ +I L L EA L+R + G+ P+N T T +++A
Sbjct: 604 VFGSKLYSE-LPLSNA---MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACN 659
Query: 307 IEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPE 366
G ++A + ++ K P Y ++ L G E+AL ++ MP
Sbjct: 660 HAGDINQAIEIFTDIVSK-------RSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP- 711
Query: 367 IGLSPDA 373
PDA
Sbjct: 712 --FKPDA 716
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 155/382 (40%), Gaps = 44/382 (11%)
Query: 25 LRNRLSPPNVIIRGF-TAVGNLQSESKKVGGAFELLKAGTEKGVESNS----VSGR--RI 77
L N + P N ++ A G L+ G ++K+G E V S + G+ +
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVL 224
Query: 78 REAEQVVDE-----TTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGL 132
+A +V DE +NAL++ Y + + +EA+ + M ++G++P ++ + +
Sbjct: 225 DDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284
Query: 133 CGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSV 192
G + + D TSL++ +C G A V M F V
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM----FEKDV 340
Query: 193 ATYNRLI----RRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
T+N +I ++ +EDA+ + + M L D VT TL+S + + L K E++
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGK--EVQ 398
Query: 249 AEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLF-----REMLRWGVSPNNETYTGLMN 303
+ D ++ + +A +F ++++ W L+
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNT---------LLA 449
Query: 304 AYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRG 363
AY G +A L F + G P+ +T+N II L G+ +EA +
Sbjct: 450 AYAESGLSGEALRL--------FYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQ 501
Query: 364 MPEIGLSPDAVSYCTVILGFCR 385
M G+ P+ +S+ T++ G +
Sbjct: 502 MQSSGIIPNLISWTTMMNGMVQ 523
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 133/348 (38%), Gaps = 44/348 (12%)
Query: 86 ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXX 145
++ ++ A++ + EA+ R M +GLK + F +V+ G G +
Sbjct: 234 DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIH 293
Query: 146 XXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLE 205
+ + + ++LI ++C A+ V M A + R E
Sbjct: 294 ACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE 353
Query: 206 DAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEP 265
+AV +F M + PD T IS + LE+ + + + G++
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSS--LEEGSQFHGKAITSGLIHYVTVSNS 411
Query: 266 LIRTLCLQQRLSEAYDLFREM-LRWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHK 324
L+ + ++ LF EM +R VS +T +++AY G+ + L D+M
Sbjct: 412 LVTLYGKCGDIDDSTRLFNEMNVRDAVS-----WTAMVSAYAQFGRAVETIQLFDKMVQH 466
Query: 325 GFLPGFVT----------------------------GFSPSHVTYNAIIYGLCLLGRAEE 356
G P VT G PS Y+ +I GR EE
Sbjct: 467 GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
Query: 357 ALGVLRGMPEIGLSPDAVSYCTVILGFCRIR---EPGK-AYELKVEVD 400
A+ + GMP PDA+ + T +L CR + E GK A E +E+D
Sbjct: 527 AMRFINGMP---FPPDAIGW-TTLLSACRNKGNLEIGKWAAESLIELD 570
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 141/354 (39%), Gaps = 65/354 (18%)
Query: 76 RIREAEQVVD-----ETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQ 130
R+ +A +V D + T +AL+ AY ++E + IL M G++ N++S+N ++
Sbjct: 166 RMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILS 225
Query: 131 GLCGKGRMXXXXXXXXXMNQKDLAPDERTYTS---------------LIHLFCDKGHPGK 175
G G ++ PD+ T +S LIH + K K
Sbjct: 226 GFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLK 285
Query: 176 ARKVLSEMID-SGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFC 234
+ V+S MID G S V L + + +A GV ++ N L+ K
Sbjct: 286 DKCVISAMIDMYGKSGHVYGIISLFNQFEMMEA-GVCNAYITG------LSRNGLVDKAL 338
Query: 235 KLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPN 294
++ E E+ E+ + ++ +I + EA +LFREM GV PN
Sbjct: 339 EMFELFKEQTMEL-----------NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Query: 295 NETYTGLMNAY---------RIEGQFSKAFHLQDEMTHKGF-------------LPGFVT 332
+ T ++ A R F+ HL D + H G L V
Sbjct: 388 HVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV-HVGSALIDMYAKCGRINLSQIVF 446
Query: 333 GFSPSH--VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFC 384
P+ V +N+++ G + G+A+E + + + L PD +S+ T +L C
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISF-TSLLSAC 499
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 119/282 (42%), Gaps = 22/282 (7%)
Query: 56 FELLKAGTEK----GVESNSVSGRRIREAEQVVDETTTYNAL----VLAYCCDERVD-EA 106
FE+++AG G+ N + + + E ++T N + ++A C D EA
Sbjct: 313 FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEA 372
Query: 107 MGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHL 166
+ + R M G+KPN ++ +++ + + L + ++LI +
Sbjct: 373 LELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDM 432
Query: 167 FCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTY 226
+ G ++ V + M + N + ++ + +F + L PD +++
Sbjct: 433 YAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISF 492
Query: 227 NTLISKFCKLKEPDL-EKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFRE 285
+L+S ++ D K F+M +E GI P + Y ++ L +L EAYDL +E
Sbjct: 493 TSLLSACGQVGLTDEGWKYFKMMSE--EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 286 MLRWGVSPNNETYTGLMNAYRIEGQFS-------KAFHLQDE 320
M P++ + L+N+ R++ K FHL+ E
Sbjct: 551 M---PFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE 589
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 25/243 (10%)
Query: 156 DERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMT 215
D S+ H++ G G ARKV M D A R+ LE+ V + M
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 216 ERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQR 275
+ ++V++N ++S F + ++A M ++ H G PD T ++ ++ +
Sbjct: 210 SSGIEANIVSWNGILSGFN--RSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEM 267
Query: 276 LSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKAFHL--QDEMTHKGFLPGFVTG 333
L+ + +++ G+ + + +++ Y G L Q EM G ++TG
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327
Query: 334 FSPSH---------------------VTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPD 372
S + V++ +II G G+ EAL + R M G+ P+
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Query: 373 AVS 375
V+
Sbjct: 388 HVT 390
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 135/357 (37%), Gaps = 62/357 (17%)
Query: 90 YNALVLAYCCD-ERVDEAMGILRCMTERG-LKPNLISFNAVVQGLCGKGRMXXXXXXXXX 147
+N L+ A D R +EA + R M ERG P+ +F V++
Sbjct: 117 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 176
Query: 148 MNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSPSVATYNRLIRRLRLEDA 207
+ + D LIHL+ G ARKV EM + + + L+R + A
Sbjct: 177 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSA 236
Query: 208 VGVFRGMT-------------------------------------ERDLSPDVVTYNTLI 230
+ +FR M + D++ DV+ N+LI
Sbjct: 237 LQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLI 296
Query: 231 SKFCKLKEPDLEKAFEMKAEMVHKGILP-DADTYEPLIRTLCLQQRLSEAYDLFREML-- 287
+CK + AE V +G+ D ++ +I R EA + F M+
Sbjct: 297 EMYCKCGSLRM-------AEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 349
Query: 288 RWGVSPNNETYTGLMNAYRIEGQFSKAFHLQDEMTHKGFLPGFVTGFSPSHVTYNAIIYG 347
R V PN+ T+ GL+ A G +K D M + P+ Y I+
Sbjct: 350 RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCI-------EPALEHYGCIVDL 402
Query: 348 LCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKVEVDENMI 404
+ G EA+ ++ MP + PDAV + +++ C+ G + EL E+ N+I
Sbjct: 403 IARAGYITEAIDMVMSMP---MKPDAVIWRSLLDACCK---KGASVELSEEIARNII 453
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 135/313 (43%), Gaps = 37/313 (11%)
Query: 91 NALVLAYCCDERVDEAMGILRCMTERGLKPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQ 150
NALV AY +D A+ I R M R ++IS+ ++V+G +G + M
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQMPV 330
Query: 151 KDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFSP------SVATYNRLIRRLRL 204
+D ++T +I + G ++ ++ EM +G P SV T + L +
Sbjct: 331 RD----RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 205 EDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYE 264
+ + + + + + DVV N LI + K EKA ++ +M + D T+
Sbjct: 387 GEWIKTY--IDKNKIKNDVVVGNALIDMYFKCGCS--EKAQKVFHDMDQR----DKFTWT 438
Query: 265 PLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYRIEGQFSKA--FHLQDEMT 322
++ L + EA +F +M + P++ TY G+++A G +A F +
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 323 HKGFLPGFVTGFSPSHVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILG 382
H+ PS V Y ++ L G +EA +LR MP ++P+++ + +LG
Sbjct: 499 HR---------IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP---MNPNSIVW-GALLG 545
Query: 383 FCRIREPGKAYEL 395
R+ EL
Sbjct: 546 ASRLHNDEPMAEL 558
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 128/307 (41%), Gaps = 24/307 (7%)
Query: 119 KPNLISFNAVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIH-LFCDKGHPGKAR 177
+P+++ +N +++G M ++ + PD T+ L++ L D G +
Sbjct: 96 EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGK 155
Query: 178 KVLSEMIDSGFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLK 237
K+ ++ G ++ N L++ L + + RG+ +R DV ++N +IS + ++K
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 215
Query: 238 EPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREML-RWGVSPNNE 296
E E++ E+ EM + P + T L+ + C + + + E + P+
Sbjct: 216 E--YEESIELLVEMERNLVSPTSVTL-LLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 297 TYTGLMNAYRIEGQFSKAFHL------QDEMTHKGFLPGFV---------TGFSP----S 337
L+NAY G+ A + +D ++ + G+V T F
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 338 HVTYNAIIYGLCLLGRAEEALGVLRGMPEIGLSPDAVSYCTVILGFCRIREPGKAYELKV 397
+++ +I G G E+L + R M G+ PD + +V+ + +K
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 398 EVDENMI 404
+D+N I
Sbjct: 393 YIDKNKI 399
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 100/242 (41%), Gaps = 4/242 (1%)
Query: 67 VESNSVSGRRIREAEQVVDETTTYNALVLAYCCDERVDEAMGILRCMTERGLKPNLISFN 126
VE ++ R + V + ++ ++ Y +E++ I R M G+ P+ +
Sbjct: 313 VERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMV 372
Query: 127 AVVQGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDS 186
+V+ G + +++ + D +LI ++ G KA+KV +M
Sbjct: 373 SVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Query: 187 GFSPSVATYNRLIRRLRLEDAVGVFRGMTERDLSPDVVTYNTLISKFCKLKEPDLEKAFE 246
A L + ++A+ VF M + + PD +TY ++S D + F
Sbjct: 433 DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFF 492
Query: 247 MKAEMVHKGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNETYTGLMNAYR 306
K H+ I P Y ++ L + EAY++ R+M ++PN+ + L+ A R
Sbjct: 493 AKMRSDHR-IEPSLVHYGCMVDMLGRAGLVKEAYEILRKM---PMNPNSIVWGALLGASR 548
Query: 307 IE 308
+
Sbjct: 549 LH 550
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 112/266 (42%), Gaps = 17/266 (6%)
Query: 77 IREAEQVVDETTT-----YNALVLAYCCD--ERVDEAMGILRCMTERGLKPNLISFNAVV 129
+++A++V DE+T+ +NAL+ +R + + M E G+ N+ S + V
Sbjct: 162 VKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVF 221
Query: 130 QGLCGKGRMXXXXXXXXXMNQKDLAPDERTYTSLIHLFCDKGHPGKARKVLSEMIDSGFS 189
+ G + + L TSL+ ++ G G AR+V E+++
Sbjct: 222 KSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIV 281
Query: 190 PSVATYNRLIRRLRLEDAVGVFRGM-TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMK 248
A L R +A+G+FR M +E + P+ V T++ +K L K E+
Sbjct: 282 VWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGK--EVH 339
Query: 249 AEMVH-KGILPDADTYEPLIRTLCLQQRLSEAYDLFREMLRWGVSPNNE-TYTGLMNAYR 306
A ++ K + + LI C ++ +F +G N ++T LM+ Y
Sbjct: 340 AHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVF-----YGSKQRNAISWTALMSGYA 394
Query: 307 IEGQFSKAFHLQDEMTHKGFLPGFVT 332
G+F +A M +GF P VT
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVT 420