Miyakogusa Predicted Gene

Lj3g3v3087260.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3087260.1 tr|G7JRH9|G7JRH9_MEDTR Sentrin-specific protease
OS=Medicago truncatula GN=MTR_4g061080 PE=4 SV=1,79.15,0,Cysteine
proteinases,NULL; Peptidase_C48,Peptidase C48, SUMO/Sentrin/Ubl1;
SENTRIN/SUMO-SPECIFIC PRO,CUFF.45295.1
         (236 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60190.1 | Symbols:  | Cysteine proteinases superfamily prote...   259   8e-70

>AT5G60190.1 | Symbols:  | Cysteine proteinases superfamily protein
           | chr5:24235319-24235999 FORWARD LENGTH=226
          Length = 226

 Score =  259 bits (663), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 125/233 (53%), Positives = 164/233 (70%), Gaps = 7/233 (3%)

Query: 1   MGKSQADEMILSYNDVVLRRSDLDILSGPYYLNDRIIEFYFSYLPSCHPSQDILLVPPCI 60
           MG +  D+ ILSY DVVLRRSDLDIL+GP +LNDR+IEFY S+L + H S  I L+PP I
Sbjct: 1   MGNTSDDDKILSYEDVVLRRSDLDILNGPIFLNDRVIEFYLSFLSTVHSSTTISLIPPSI 60

Query: 61  AFWILQCPVAEALKDLLEPLHLSDKTLVLFPINDNDNVNTAEGGSHWSLLAYYRDTNLFV 120
           AFWI  CP  E LKD ++PL+L DK L++ P+NDN NV  AEGG HWSLL YY++ N FV
Sbjct: 61  AFWISNCPDTEYLKDFMKPLNLRDKDLLILPVNDNSNVEVAEGGLHWSLLVYYKEANTFV 120

Query: 121 HHDSFRGLNAAPSKKLYKTVVGYMGLSQSGSRASFLECTDSPKQANGYDCGLYVTAIARV 180
           HHDS+ G+N   +K+L+K V  ++    S   AS+ ECTD+P+Q NGYDCG+++ A ARV
Sbjct: 121 HHDSYMGVNRWSAKQLFKAVSPFV----SNGDASYKECTDTPQQKNGYDCGVFLLATARV 176

Query: 181 ICDWHVNNKDKNTDKSDLWFSAVREQVTQSAVASMRSEILALIRDLMARHLDQ 233
           IC+W  +   KN D  +LWF+ V+E V    V  +R EILALI+ LM+  + +
Sbjct: 177 ICEWFSSGGMKNRD--ELWFANVKETVPD-LVNHLREEILALIKKLMSESVSK 226