Miyakogusa Predicted Gene

Lj3g3v3086010.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3086010.3 Non Chatacterized Hit- tr|I3S0K3|I3S0K3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.75,0,seg,NULL;
Root_cap,Root cap; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.45307.3
         (393 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60520.1 | Symbols:  | Late embryogenesis abundant (LEA) prot...   417   e-117
AT5G60530.1 | Symbols:  | late embryogenesis abundant protein-re...   407   e-114
AT4G27400.1 | Symbols:  | Late embryogenesis abundant (LEA) prot...   249   3e-66
AT5G54370.1 | Symbols:  | Late embryogenesis abundant (LEA) prot...   241   7e-64
AT1G54890.1 | Symbols:  | Late embryogenesis abundant (LEA) prot...   240   1e-63
AT3G19430.1 | Symbols:  | late embryogenesis abundant protein-re...   222   3e-58

>AT5G60520.1 | Symbols:  | Late embryogenesis abundant (LEA)
           protein-related | chr5:24331787-24332947 REVERSE
           LENGTH=338
          Length = 338

 Score =  417 bits (1073), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 189/298 (63%), Positives = 228/298 (76%)

Query: 85  ASEYEVLSALPSGQERAFCKAKNTCQFKTLSCPAECQXXXXXXXXXXXGCFIDCSSKCEA 144
           ++ Y VL  L SGQER  C A+ +C  K L+CP EC             CFIDCSSKCE 
Sbjct: 35  STNYNVLYPLGSGQERVQCLARGSCNQKILTCPKECPERKPKMNKKKKACFIDCSSKCEV 94

Query: 145 TCKFRKSKCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEG 204
           TCK+RK+ C+GYG+LCYDPRFVGGDGVMFYFHG K GNFAI SD+  QINAHFIGTRP G
Sbjct: 95  TCKWRKANCNGYGSLCYDPRFVGGDGVMFYFHGNKDGNFAIVSDENLQINAHFIGTRPAG 154

Query: 205 RTRDYTWVQALSVMFDTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANG 264
           RTRD+TWVQA SVMFD+H LVIAA +V+ WDD+VDSL+V+W+GEE+ VPT+GEAEWR + 
Sbjct: 155 RTRDFTWVQAFSVMFDSHNLVIAAKKVASWDDSVDSLVVRWNGEEVEVPTEGEAEWRIDL 214

Query: 265 XXXXXXXXXXXXXXXXRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRF 324
                           RVTVSG++++DI+VRPIG++E++VH YQLP DDAFAHLETQF+F
Sbjct: 215 DEREVIVERTDERNNVRVTVSGIVQIDIQVRPIGKEEDRVHKYQLPKDDAFAHLETQFKF 274

Query: 325 KKHTDSIEGILGQTYRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRFERPSG 382
              +D +EG+LG+TYRPGYVSPVK GVPMPMMGGEDKYQTP+L+S  C  CRF+  +G
Sbjct: 275 FNLSDLVEGVLGKTYRPGYVSPVKTGVPMPMMGGEDKYQTPSLFSPLCNVCRFQGKTG 332


>AT5G60530.1 | Symbols:  | late embryogenesis abundant
           protein-related / LEA protein-related |
           chr5:24334197-24335685 REVERSE LENGTH=439
          Length = 439

 Score =  407 bits (1047), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 182/304 (59%), Positives = 231/304 (75%), Gaps = 1/304 (0%)

Query: 85  ASEYEVLSALPSGQERAFCKAKNTCQFKTLSCPAECQXXXXXXXXXXXGCFIDCSSKCEA 144
           A+ Y +LS LP+GQE+A C+ + +C +KTL CP EC            GCFIDC++KCEA
Sbjct: 135 AARYRILSPLPTGQEQAMCQGRGSCYYKTLVCPGECPKRKPTKNKNTKGCFIDCTNKCEA 194

Query: 145 TCKFRKSKCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEG 204
           TCK+RK+ C+GYG+LCYDPRFVGGDGVMFYFHG+KGGNFAI SD+  QINAHFIGTRP G
Sbjct: 195 TCKWRKTNCNGYGSLCYDPRFVGGDGVMFYFHGSKGGNFAIVSDNNLQINAHFIGTRPVG 254

Query: 205 RTRDYTWVQALSVMFDTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRA-N 263
           RTRD+TWVQAL+VMF+ H LVI ANRV++WD+  D+  +++DGE I++P D ++EWR  +
Sbjct: 255 RTRDFTWVQALNVMFENHKLVITANRVNQWDETSDAFTIRYDGELITLPEDEQSEWREIS 314

Query: 264 GXXXXXXXXXXXXXXXXRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFR 323
           G                RV VS L++MDIRVRPIG++EN+VHNYQLP DDAFAHLETQF+
Sbjct: 315 GQKKDIIIERTDERNSVRVLVSDLVQMDIRVRPIGKEENRVHNYQLPQDDAFAHLETQFK 374

Query: 324 FKKHTDSIEGILGQTYRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRFERPSGS 383
           F   ++ +EG+LG+TYRP YVS  K GVPMP++GGEDKYQTP+L+S TC+ CRF+    S
Sbjct: 375 FLDLSELVEGVLGKTYRPDYVSSAKTGVPMPVLGGEDKYQTPSLFSPTCRLCRFKPQEES 434

Query: 384 ASTE 387
            S +
Sbjct: 435 LSAD 438


>AT4G27400.1 | Symbols:  | Late embryogenesis abundant (LEA)
           protein-related | chr4:13705341-13706637 FORWARD
           LENGTH=341
          Length = 341

 Score =  249 bits (635), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 115/290 (39%), Positives = 169/290 (58%), Gaps = 4/290 (1%)

Query: 97  GQERAFCKAKNTCQFKTLSCPAECQXXXXXXXXXXXGCFIDC-SSKCEATCKFRKSKCDG 155
           GQ      A   CQ + + CP EC             C++DC    CEA C+  K  C+ 
Sbjct: 27  GQTYCGGNATPRCQLRYIDCPEECPTEMFPNSQNKI-CWVDCFKPLCEAVCRAVKPNCES 85

Query: 156 YGALCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEGRTRDYTWVQAL 215
           YG++C DPRF+GGDG++FYFHG    +F+I SD +FQINA F G RP GRTRD+TW+QAL
Sbjct: 86  YGSICLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPAGRTRDFTWIQAL 145

Query: 216 SVMFDTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANGXXXXXXXXXXX 275
             +F++H   +   +V+ WD N+D L    DG+++ +P +  + W ++            
Sbjct: 146 GFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLSTWYSSDKDIKIERLTEK 205

Query: 276 XXXXXRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRFKKHTDSIEGIL 335
                 VT+    E+ + V P+ ++++++HNY+LP DD FAH E QF+F   +  ++GIL
Sbjct: 206 NSVI--VTIKDKAEIMVNVVPVTKEDDRIHNYKLPVDDCFAHFEVQFKFINLSPKVDGIL 263

Query: 336 GQTYRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRFERPSGSAS 385
           G+TYRP + +P K GV MP++GGED ++T +L S  CK C F      AS
Sbjct: 264 GRTYRPDFKNPAKPGVVMPVVGGEDSFRTSSLLSHVCKTCLFSEDPAVAS 313


>AT5G54370.1 | Symbols:  | Late embryogenesis abundant (LEA)
           protein-related | chr5:22075334-22076567 FORWARD
           LENGTH=337
          Length = 337

 Score =  241 bits (615), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 108/270 (40%), Positives = 162/270 (60%), Gaps = 4/270 (1%)

Query: 109 CQFKTLSCPAECQXXXXXXXXXXXGCFIDCS-SKCEATCKFRKSKCDGYGALCYDPRFVG 167
           C  K + CP EC             C+ DC    C++ C+ RK  C+  G+ CYDPRF+G
Sbjct: 36  CYRKYIRCPEECPSKTAMNSKNKV-CYADCDRPTCKSQCRMRKPNCNRPGSACYDPRFIG 94

Query: 168 GDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEGRTRDYTWVQALSVMFDTHTLVIA 227
           GDG++FYFHG     F++ SD + QIN  FIG RP GR RD+TW+QAL  +F+++   + 
Sbjct: 95  GDGIVFYFHGKSNEEFSLVSDSDLQINGRFIGHRPAGRARDFTWIQALGFLFNSNKFSLE 154

Query: 228 ANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANGXXXXXXXXXXXXXXXXRVTVSGL 287
           A + + WD+ +D L   +DG+++SVP +  + W +                   VT+   
Sbjct: 155 AAKTASWDNEIDHLKFSYDGQDLSVPEETLSTWYSPNKDIKIERVSMRNSVI--VTIKDK 212

Query: 288 LEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRFKKHTDSIEGILGQTYRPGYVSPV 347
            E+ I V P+ ++++++H+Y++PSDD FAHLE QFRF   +  ++GILG+TYRP + +P 
Sbjct: 213 AEIMINVVPVTKEDDRIHSYKVPSDDCFAHLEVQFRFFNLSPKVDGILGRTYRPDFQNPA 272

Query: 348 KRGVPMPMMGGEDKYQTPTLYSTTCKHCRF 377
           K GV MP++GGED ++T +L S  CK C F
Sbjct: 273 KPGVAMPVVGGEDSFKTSSLLSNDCKTCIF 302


>AT1G54890.1 | Symbols:  | Late embryogenesis abundant (LEA)
           protein-related | chr1:20463107-20464407 FORWARD
           LENGTH=347
          Length = 347

 Score =  240 bits (613), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 121/304 (39%), Positives = 181/304 (59%), Gaps = 8/304 (2%)

Query: 90  VLSALPSGQERAFC-KAKNTCQFKTLSCPAECQXXXXXXXXXXXGCFIDC-SSKCEATCK 147
           V+  L +  E   C + K+ C  K  +CP +C             C IDC +  C+ATC+
Sbjct: 22  VVVQLEAALETKTCFQRKSPCFLKKQTCPKQCPSFSPPNGSTK-ACVIDCFNPICKATCR 80

Query: 148 FRKSKCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEGRTR 207
            RK  C+G G+ C DPRF+GGDG++FYFHG +  +FA+ SD +FQ+NA FIG RP GR R
Sbjct: 81  NRKPNCNGKGSACLDPRFIGGDGIVFYFHGKRDEHFALISDVDFQVNARFIGLRPNGRAR 140

Query: 208 DYTWVQALSVMF--DTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANGX 265
           D+TW+Q+L ++F  ++ T  + A +  KWD  VD L + ++G+EIS+P    + W +   
Sbjct: 141 DFTWIQSLGLIFGPNSKTFSLEATKAEKWDHQVDHLRLSYEGKEISLPKGDTSVW-SPPL 199

Query: 266 XXXXXXXXXXXXXXXRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRFK 325
                           VT+  + E+ I V P+ ++++ +H Y +P DD FAHLE QFRF 
Sbjct: 200 GDYIKIERTSDINSVLVTLQDIAEIWINVVPVTKEDDIIHKYGIPEDDCFAHLEVQFRFL 259

Query: 326 KHTDSIEGILGQTYRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRFERPSGSAS 385
           K + ++EG+LG+TY+  + +P K GV MP++GGEDKY+T +L  T+C  C +    GS S
Sbjct: 260 KLSSNVEGVLGRTYKEDFKNPAKPGVAMPVVGGEDKYRTASLLETSCNACVYS--GGSRS 317

Query: 386 TEGI 389
            + I
Sbjct: 318 LDKI 321


>AT3G19430.1 | Symbols:  | late embryogenesis abundant
           protein-related / LEA protein-related |
           chr3:6736382-6738330 REVERSE LENGTH=559
          Length = 559

 Score =  222 bits (566), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 113/285 (39%), Positives = 164/285 (57%), Gaps = 19/285 (6%)

Query: 96  SGQERAFCKAKNT-CQFKTLSCPAECQXXXXXXXXXXXGCFIDCSSKCEATCKFRKSKCD 154
           +G +R  CK + + C     +CPA+C             C +DC + C+  C      CD
Sbjct: 258 AGAKRVRCKKQRSPCYGVEYTCPADCPRS----------CQVDCVT-CKPVCN-----CD 301

Query: 155 GYGALCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEGRTRDYTWVQA 214
             G++C DPRF+GGDG+ FYFHG K  NF + SD    INAHFIG R  G  RD+TWVQ+
Sbjct: 302 KPGSVCQDPRFIGGDGLTFYFHGKKDSNFCLISDPNLHINAHFIGKRRAGMARDFTWVQS 361

Query: 215 LSVMFDTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANGXX--XXXXXX 272
           ++++F TH L + A + + WDD+VD + V +DG  IS+P    A W ++           
Sbjct: 362 IAILFGTHRLYVGALKTATWDDSVDRIAVSFDGNVISLPQLDGARWTSSPGVYPEVSVKR 421

Query: 273 XXXXXXXXRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRFKKHTDSIE 332
                    V V GLL++  RV PI  +++++H Y +  DD  AHL+  F+F+  +D+++
Sbjct: 422 VNTDTNNLEVEVEGLLKITARVVPITMEDSRIHGYDVKEDDCLAHLDLGFKFQDLSDNVD 481

Query: 333 GILGQTYRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRF 377
           G+LGQTYR  YVS VK GV MP+MGG+ ++QT  L++  C   RF
Sbjct: 482 GVLGQTYRSNYVSRVKIGVHMPVMGGDREFQTTGLFAPDCSAARF 526