Miyakogusa Predicted Gene
- Lj3g3v3085640.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3085640.1 Non Chatacterized Hit- tr|J3KWI1|J3KWI1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G1,26.92,4e-18,PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; no description,Tetratricopeptide-like
,CUFF.45281.1
(619 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 395 e-110
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 192 5e-49
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 2e-48
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 6e-47
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 9e-47
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 4e-46
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 4e-46
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 4e-46
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 182 6e-46
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 7e-46
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 8e-46
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 2e-45
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 6e-45
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 177 3e-44
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 6e-44
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 6e-44
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 7e-44
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 1e-43
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 1e-43
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 2e-43
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 172 7e-43
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 170 2e-42
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 170 2e-42
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 3e-42
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 4e-42
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 9e-42
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 1e-41
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 1e-41
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 6e-41
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 7e-41
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 9e-40
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 2e-39
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 2e-39
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 8e-39
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 8e-39
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 1e-38
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 2e-38
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 3e-38
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 4e-37
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 6e-37
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 6e-37
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 7e-37
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 1e-36
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 151 2e-36
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 6e-36
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 7e-36
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 147 2e-35
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 147 2e-35
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 7e-35
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 1e-34
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 2e-34
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 142 8e-34
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 9e-33
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 6e-32
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 6e-32
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 8e-32
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 8e-32
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 135 9e-32
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 1e-31
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 2e-30
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 130 3e-30
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 4e-30
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 127 2e-29
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 126 4e-29
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 5e-29
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 5e-29
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 124 1e-28
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 1e-28
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 122 9e-28
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 2e-27
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 120 2e-27
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 9e-27
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 117 3e-26
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 4e-26
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 4e-26
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 5e-25
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 113 5e-25
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 112 1e-24
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 5e-24
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 9e-24
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 106 4e-23
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 96 9e-20
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 94 3e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 92 1e-18
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 91 2e-18
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 91 2e-18
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 90 6e-18
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 88 2e-17
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 87 4e-17
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 87 4e-17
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 86 1e-16
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 80 3e-15
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 74 2e-13
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 74 3e-13
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 74 3e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 74 4e-13
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 73 5e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 73 8e-13
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 72 2e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-12
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 72 2e-12
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 72 2e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 71 2e-12
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 71 2e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 71 2e-12
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 70 4e-12
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 69 1e-11
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 68 2e-11
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 68 2e-11
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 67 3e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 67 3e-11
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 67 3e-11
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 67 4e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 5e-11
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 66 7e-11
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 66 8e-11
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 65 2e-10
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 63 8e-10
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 9e-10
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 62 9e-10
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 62 1e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 61 2e-09
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 60 3e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 57 3e-08
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 57 4e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 56 6e-08
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 55 1e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 55 1e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 54 4e-07
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 54 4e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 54 5e-07
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 52 1e-06
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 52 2e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/585 (38%), Positives = 341/585 (58%), Gaps = 31/585 (5%)
Query: 46 TYNKLVLACCRDGR-VEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAE 100
+YN ++ A R R + A + + M ES + TY LI FC G D A +F +
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M G P+V TYN ++ YC+ ++ + +LR + +G EPNLIS+N ++ G C +G+
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
M+E +L EMN++G +LD+ TY +LI +C +G +A M AEM+ G+ P TY
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
LI S+C ++ A + +M RGL P+ +TYT L+ + + ++A+ + EM G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
F P S VTYNA+I+G C+ + E+A+ +L M E GLSPD VSYSTV+ GFCR
Sbjct: 411 FSP--------SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 341 IRELGKAYKLKVEMDKK-----SISWLGLWGLY----------DDIDKSVMQGLSHED-T 384
++ +A ++K EM +K +I++ L + D ++ + GL ++ T
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 385 FSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFI 444
++ L++ Y EG LEKA L E+ LP V YSV +N LNK++R EAK LL
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 445 SHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDG 504
+ P+ + Y TLIENCSN EFKSVV L+KGF M+G+M +A + + ML N+KPDG
Sbjct: 583 YEESV--PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDG 640
Query: 505 AVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQN 564
YN++I HCR G++ KAY +Y EMV GF H +V+AL++AL + N+++ VI +
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVH 700
Query: 565 TLRSCNLNDSELLQVLNEIDVREGQTEYLRGELAERAMDGLLLDG 609
LRSC L+++E +VL EI+ REG + + LAE A DG L +G
Sbjct: 701 VLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNG 745
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 204/409 (49%), Gaps = 55/409 (13%)
Query: 2 KLLRVLFKTFLRNRVPPPDVMIRGFA-------AAWTETEKTNWKGLA-DETTYNKLVLA 53
KLLR + L + +V+I G ++ TE N +G + DE TYN L+
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE-MNRRGYSLDEVTYNTLIKG 319
Query: 54 CCRDGRVEEAL----GILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPS 109
C++G +AL +LR TYTSLIH C G ++A + +M G P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 110 VATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
TY +V + + EA +LR + + GF P+++++NAL+ G C GKME+A +L+
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 170 EMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQ 229
+M +KGL+ D +Y++++ FC V++A +K EMV KGI PD TY LI C Q+
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 230 TLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT-- 287
EA DL++EMLR GL PD TYT L++AY ++ KA L +EM+ KG LPD VT
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 288 ----GIS---------------------TSHVTYN---------------AIIHGLCLLD 307
G++ S VTY+ ++I G C+
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDK 356
EA ++ M PD +Y+ +I G CR ++ KAY L EM K
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 206/492 (41%), Gaps = 81/492 (16%)
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNA--- 150
+K E D +S S + ++ +V +Y R +AL I+ GF P ++S+NA
Sbjct: 119 VFKSLQETYDLCYSTS-SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLD 177
Query: 151 ---------------------------------LVQGFCGKGKMEEAEELLQEMNQKGLA 177
L++GFC G ++ A L +M KG
Sbjct: 178 ATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL 237
Query: 178 LDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDL 237
+ TY +LI +C K++ F++ M KG+ P+ +Y +I LC + + E +
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 238 FQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYN 297
EM RRG S D TY L+ Y + F +A + EM+ G P S +TY
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP--------SVITYT 349
Query: 298 AIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
++IH +C A+E L M GL P+ +Y+T++ GF + + +AY++ EM+
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 358 SISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVD 417
S SV+ T++ L++ + G +E A + ++ P
Sbjct: 410 GFS------------PSVV-------TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 418 VHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVK 477
V YS L+ + + EA LR + ++E + + L++
Sbjct: 451 VSYSTVLSGFCRSYDVDEA------------LR-----VKREMVEKGIKPDTITYSSLIQ 493
Query: 478 GFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP 537
GF + K+A ++ ML PD Y LI +C G++ KA ++ EMV G P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 538 HMFSVLALIEAL 549
+ + LI L
Sbjct: 554 DVVTYSVLINGL 565
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 146/595 (24%), Positives = 269/595 (45%), Gaps = 88/595 (14%)
Query: 38 WKGLADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTS------------- 80
W D +T+N L+ A CR ++ A+ +L M DE T+T+
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 81 ----------------------LIHLFCDQGQCDKAYKVFAEMIDT-GFSPSVATYNAIV 117
++H FC +G+ + A EM + GF P T+N +V
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 118 LAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLA 177
C+ + A+ I+ +++ G++P++ ++N+++ G C G+++EA E+L +M + +
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 178 LDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDL 237
+ TY +LI C + +VE+A E+ + KGILPD T+ LI LCL + A +L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 238 FQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYN 297
F+EM +G PD TY L+ + + + +A ++ +M ++G + S +TYN
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM--------ELSGCARSVITYN 474
Query: 298 AIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
+I G C ++ EA EI M G+S ++V+Y+T+I G C+ R + A +L
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL------- 527
Query: 358 SISWLGLWGLYDDIDKSVMQGLSHED-TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPV 416
+D+ +M+G + T+++L++ + G ++KA + + + P
Sbjct: 528 -------------MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 417 DVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLV 476
V Y ++ L K R+ E LL I + N + + + V +
Sbjct: 575 IVTYGTLISGLCKAGRV-EVASKLLRSIQMKGI-------------NLTPHAYNPV---I 617
Query: 477 KGFGMRGLMKKAARAHDRMLEGNYKPDGAV-YNLLIFDHCRCGN-VHKAYDMYMEMVHYG 534
+G + +A MLE N P AV Y ++ C G + +A D +E++ G
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKG 677
Query: 535 FAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLNEIDVREGQ 589
F P S+ L E L + + ++ ++ ++ E+ V + +R+ Q
Sbjct: 678 FVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQ 732
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 163/332 (49%), Gaps = 13/332 (3%)
Query: 34 EKTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQ 88
E +N G D+ T+N LV C+ G V+ A+ I+ M + D TY S+I C
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 89 GQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISF 148
G+ +A +V +MI SP+ TYN ++ C++ + EA + R L +G P++ +F
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 149 NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH 208
N+L+QG C A EL +EM KG D+ TY LI C+KGK+++A M +M
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSK 268
G TY LI C EA ++F EM G+S ++ TY L+ +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 269 AFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDA 328
A L D+MI +G PD TYN+++ C ++A +I++ M G PD
Sbjct: 524 AAQLMDQMIMEGQKPD--------KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 329 VSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
V+Y T+I G C+ + A KL + K I+
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 222/494 (44%), Gaps = 45/494 (9%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
+ D + Y +++L D A+M G P V+T+N ++ A CR + R A+
Sbjct: 151 KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+L + G P+ +F ++QG+ +G ++ A + ++M + G + + + ++H FC
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 192 NKGKVEKAFEMKAEMVHK-GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDN 250
+G+VE A EM ++ G PD T+ L+ LC + A ++ ML+ G PD
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 251 KTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAE 310
TY ++S + +A + D+MI + P+ VTYN +I LC ++ E
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN--------TVTYNTLISTLCKENQVE 382
Query: 311 EALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDD 370
EA E+ R + G+ PD +++++I G C R A +L EM K G D
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK--------GCEPD 434
Query: 371 IDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKK 430
E T++ L+ ++G L++A + +++ + Y+ ++ K
Sbjct: 435 -----------EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 431 ARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAAR 490
+ EA+ H R + Y+TLI+ GL K ++ AA+
Sbjct: 484 NKTREAEEIFDEMEVHGVSR--NSVTYNTLID-----------GLCKS----RRVEDAAQ 526
Query: 491 AHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
D+M+ KPD YN L+ CR G++ KA D+ M G P + + LI LC
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 551 CVRRYNKMSWVIQN 564
R S ++++
Sbjct: 587 KAGRVEVASKLLRS 600
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/554 (25%), Positives = 248/554 (44%), Gaps = 51/554 (9%)
Query: 48 NKLVLACCRDGRVEEALGILRGMAESDE--NTYT--SLIHLFCDQGQCDKAYKVFAEMID 103
N L+ + R G VE A G+ + ++ S N YT +++ C G+ +K +++ +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEE 163
G P + TYN ++ AY EA ++ + +GF P + ++N ++ G C GK E
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 164 AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIG 223
A+E+ EM + GL+ D TY SL+ C KG V + ++ ++M + ++PD + ++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 224 SLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
L +A F + GL PDN YT L+ Y + S A +L++EM+ +G
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 284 DFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRE 343
D VTYN I+HGLC EA ++ M E L PD+ + + +I G C++
Sbjct: 444 DV--------VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 344 LGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYL 403
L A +L +M +K I D+ T++ L+ + G ++ A
Sbjct: 496 LQNAMELFQKMKEKRIRL--------DV-----------VTYNTLLDGFGKVGDIDTAKE 536
Query: 404 LEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN 463
+ ++ + LP + YS+ +N L K + EA F ++D +I
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEA-----------------FRVWDEMISK 579
Query: 464 CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKA 523
++KG+ G ++M+ + PD YN LI+ R N+ KA
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Query: 524 YDMY--MEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTL-RSCNLNDSELLQVL 580
+ + ME G P +F+ +++ C + + V++ + R N + S ++
Sbjct: 640 FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699
Query: 581 NEIDVREGQTEYLR 594
N ++ TE R
Sbjct: 700 NGFVSQDNLTEAFR 713
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 240/536 (44%), Gaps = 56/536 (10%)
Query: 29 AWTETEKTNWKGLA-DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIH 83
AW ++ + G+ + T N +V A C+DG++E+ L + E D TY +LI
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
+ +G ++A+++ M GFSP V TYN ++ C+ ++ A + ++ G P
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
+ ++ +L+ C KG + E E++ +M + + D ++S++ LF G ++KA
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQ 263
+ G++PD Y LI C + +S A +L EML++G + D TY ++ +
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 264 AQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIG 323
+A L +EM + PD T +I G C L + A+E+ + M E
Sbjct: 459 KMLGEADKLFNEMTERALFPD--------SYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 324 LSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED 383
+ D V+Y+T++ GF ++ ++ A ++ +M K I L
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI-------------------LPTPI 551
Query: 384 TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWF 443
++S L++ ++GHL +A+ + E+ + P + + + + ++ + L
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 444 ISHVCLRMPTFIIYDTLIENCSNNEFKS-VVGLVK---------------------GFGM 481
IS + P I Y+TLI E S GLVK GF
Sbjct: 612 ISEGFV--PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 482 RGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP 537
+ MK+A +M+E PD + Y +I N+ +A+ ++ EM+ GF+P
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 219/483 (45%), Gaps = 47/483 (9%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVF 98
D TYN L+ A G +EEA ++ M + TY ++I+ C G+ ++A +VF
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
AEM+ +G SP TY ++++ C+ E + + R P+L+ F++++ F
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G +++A + + GL D+ YT LI +C KG + A ++ EM+ +G D TY
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
++ LC ++ L EA LF EM R L PD+ T T L+ + A L +M
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
K D VT YN ++ G + + A EI M + P +SYS ++
Sbjct: 509 KRIRLDVVT--------YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLW-----------GLYDD----IDKSVMQGLSHE- 382
C L +A+++ EM K+I + G D ++K + +G +
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 383 DTFSNLMSDYLAEGHLEKAYLLEREIN--YFDYLPVDVHYSVFLNVLNKKARITEAKHHL 440
+++ L+ ++ E ++ KA+ L +++ +P Y+ L+ ++ ++ EA+
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE--- 677
Query: 441 LWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNY 500
++ +IE N + + ++ GF + + +A R HD ML+ +
Sbjct: 678 --------------VVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Query: 501 KPD 503
PD
Sbjct: 724 SPD 726
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 6/215 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKVF 98
D TYN L+ + G ++ A I M + +Y+ L++ C +G +A++V+
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EMI P+V N+++ YCR + L +I GF P+ IS+N L+ GF +
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 159 GKMEEAEELLQEMN--QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
M +A L+++M Q GL D TY S++H FC + ++++A + +M+ +G+ PD
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS 693
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
TY +I Q L+EAF + EML+RG SPD+K
Sbjct: 694 TYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 228/484 (47%), Gaps = 40/484 (8%)
Query: 16 VPPPDVMIRGF--------AAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGIL 67
+ P +IRGF AA E + + + D TYN ++ C+ G + AL +L
Sbjct: 137 IIPCTTLIRGFCRLGKTRKAAKILEILEGSG-AVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 68 RGMAES-DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRF 126
M+ S D TY +++ CD G+ +A +V M+ P V TY ++ A CRD
Sbjct: 196 DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255
Query: 127 REALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSL 186
A+ +L + +RG P+++++N LV G C +G+++EA + L +M G + T+ +
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 187 IHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL 246
+ C+ G+ A ++ A+M+ KG P T+ LI LC + L A D+ ++M + G
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 247 SPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLL 306
P++ +Y L+ + + + +A + M+ +G PD VTYN ++ LC
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI--------VTYNTMLTALCKD 427
Query: 307 DRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWG 366
+ E+A+EIL + G SP ++Y+TVI G + + GKA KL EM K +
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP----- 482
Query: 367 LYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNV 426
D I T+S+L+ EG +++A E P V ++ +
Sbjct: 483 --DTI------------TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 427 LNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCS-NNEFKSVVGLVKGFGMRGLM 485
L K + A L++ I+ C P Y LIE + K + L+ +GLM
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGC--KPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Query: 486 KKAA 489
KK++
Sbjct: 587 KKSS 590
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 223/498 (44%), Gaps = 51/498 (10%)
Query: 56 RDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVA 111
R G +EE L M D T+LI FC G+ KA K+ + +G P V
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 112 TYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM 171
TYN ++ YC+ AL +L P+++++N +++ C GK+++A E+L M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 172 NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTL 231
Q+ D TYT LI C V A ++ EM +G PD TY L+ +C + L
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 232 SEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIST 291
EA +M G P+ T+ ++ + ++ A L +M+ KGF P
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP-------- 342
Query: 292 SHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLK 351
S VT+N +I+ LC A++IL MP+ G P+++SY+ ++ GFC+ +++ +A
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA---- 398
Query: 352 VEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYF 411
+E ++ +S G Y DI T++ +++ +G +E A + +++
Sbjct: 399 IEYLERMVS----RGCYPDI-----------VTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 412 DYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKS 471
PV + Y+ ++ L K + +A LL + L+ P I Y +
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKA-IKLLDEMRAKDLK-PDTITYSS------------ 489
Query: 472 VVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMV 531
LV G G + +A + +P+ +N ++ C+ +A D + M+
Sbjct: 490 ---LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546
Query: 532 HYGFAPHMFSVLALIEAL 549
+ G P+ S LIE L
Sbjct: 547 NRGCKPNETSYTILIEGL 564
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 214/491 (43%), Gaps = 47/491 (9%)
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+++ F+ N + R E L ++ G P++I L++GFC GK
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+A ++L+ + G D TY +I +C G++ A + M + PD TY +
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTI 210
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
+ SLC L +A ++ ML+R PD TYT L+ A + A L DEM +G
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
PD VTYN +++G+C R +EA++ L MP G P+ ++++ ++ C
Sbjct: 271 TPDV--------VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 342 RELGKAYKLKVEMDKKS-----------ISWL---GLWGLYDDIDKSVMQGLSHEDTFS- 386
A KL +M +K I++L GL G DI + + Q ++ S
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 387 -NLMSDYLAEGHLEKAY-LLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFI 444
L+ + E +++A LER ++ Y P V Y+ L L K ++ +A L
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 445 SHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDG 504
S C P I Y+T+I+ G G KA + D M + KPD
Sbjct: 442 SKGC--SPVLITYNTVID---------------GLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 505 AVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNK-MSWVIQ 563
Y+ L+ R G V +A + E G P+ + +++ LC R+ ++ + +++
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 564 NTLRSCNLNDS 574
R C N++
Sbjct: 545 MINRGCKPNET 555
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 238/507 (46%), Gaps = 49/507 (9%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYNK+V C+ G VEEA + + E+ D TYTSLI +C + D A+KVF EM
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G + Y ++ C +R EA+ + + + P + ++ L++ CG +
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
EA L++EM + G+ + TYT LI C++ K EKA E+ +M+ KG++P+ TY L
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I C + + +A D+ + M R LSP+ +TY L+ Y ++ KA + ++M+ +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKV 458
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
LPD VTYN++I G C + A +L M + GL PD +Y+++I C+
Sbjct: 459 LPDV--------VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
+ + +A L +++K ++ VM ++ L+ Y G +++A
Sbjct: 511 KRVEEACDLFDSLEQKGVN-----------PNVVM--------YTALIDGYCKAGKVDEA 551
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLI 461
+L+ ++ + LP + ++ ++ L ++ EA L V + + + DT+
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT---LLEEKMVKIGLQPTVSTDTI- 607
Query: 462 ENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVH 521
L+ G A +ML KPD Y I +CR G +
Sbjct: 608 -------------LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 522 KAYDMYMEMVHYGFAPHMFSVLALIEA 548
A DM +M G +P +F+ +LI+
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKG 681
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 148/294 (50%), Gaps = 13/294 (4%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN+L+ C+ V +A+G+L M E D TY SLI C G D AY++ + M
Sbjct: 430 TYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
D G P TY +++ + C+ KR EA + L ++G PN++ + AL+ G+C GK+
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+EA +L++M K + T+ +LIH C GK+++A ++ +MV G+ P T L
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I L A+ FQ+ML G PD TYT + Y + + A + +M G
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
PD TY+++I G L + A ++L+ M + G P ++ ++I
Sbjct: 669 SPDL--------FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 163/366 (44%), Gaps = 50/366 (13%)
Query: 39 KGLADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKA 94
K L D TYN L+ CR G + A +L M + D+ TYTS+I C + ++A
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
+F + G +P+V Y A++ YC+ + EA +L ++ + PN ++FNAL+ G
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
C GK++EA L ++M + GL T T LIH G + A+ +M+ G PD
Sbjct: 577 LCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
A TY I + C + L +A D+ +M G+SPD TY+ L+ Y Q + AF +
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 275 EMIHKGFLP----------------------------------DFVT-----------GI 289
M G P +F T +
Sbjct: 697 RMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSV 756
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEI-GLSPDAVSYSTVIFGFCRIRELGKAY 348
+ + +Y +I G+C + A ++ M G+SP + ++ ++ C++++ +A
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816
Query: 349 KLKVEM 354
K+ +M
Sbjct: 817 KVVDDM 822
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 168/410 (40%), Gaps = 59/410 (14%)
Query: 182 TYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP--LIGSLCLQQTLSEAFDLFQ 239
+Y SL+ L N G V F+++ M+ D+ G + LC + E F+L
Sbjct: 125 SYASLLTLLINNGYVGVVFKIRLLMIK-----SCDSVGDALYVLDLCRKMNKDERFEL-- 177
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
Y ++ Y F L DEM + ++ + + TYN +
Sbjct: 178 ------------KYKLIIGCYNTLLNSLARFGLVDEM-KQVYMEMLEDKVCPNIYTYNKM 224
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMD---- 355
++G C L EEA + + + E GL PD +Y+++I G+C+ ++L A+K+ EM
Sbjct: 225 VNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGC 284
Query: 356 -KKSISWLGL---WGLYDDIDKSVMQGLSHED--------TFSNLMSDYLAEGHLEKAYL 403
+ +++ L + ID+++ + +D T++ L+ +A
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 404 LEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN 463
L +E+ P Y+V ++ L + + +A+ L + MP I Y+ LI
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL--MPNVITYNALING 402
Query: 464 -CSNNEFKSVVGLVKGFGMRGL------------------MKKAARAHDRMLEGNYKPDG 504
C + V +V+ R L + KA ++MLE PD
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDV 462
Query: 505 AVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRR 554
YN LI CR GN AY + M G P ++ ++I++LC +R
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 124/284 (43%), Gaps = 31/284 (10%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKV 97
D TY + CR+GR+ +A ++ M E+ D TY+SLI + D GQ + A+ V
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 98 FAEMIDTGFSPSVATYNAIV-----LAYCRDK-------------RFREALGILRCLIER 139
M DTG PS T+ +++ + Y + K F + +L ++E
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 140 GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQ-KGLALDDKTYTSLIHLFCNKGKVEK 198
PN S+ L+ G C G + AE++ M + +G++ + + +L+ C K +
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 199 AFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
A ++ +M+ G LP ++ LI L + +FQ +L+ G D + ++
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Query: 259 AYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
Q +AF+ ++ K G S TY+ +I G
Sbjct: 875 GVGKQG-LVEAFYELFNVMEKN-------GCKFSSQTYSLLIEG 910
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/520 (26%), Positives = 242/520 (46%), Gaps = 51/520 (9%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D T++ LV C +GRV EA+ ++ M E D T ++LI+ C +G+ +A +
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M++ GF P TY ++ C+ AL + R + ER + +++ ++ ++ C
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G ++A L EM KG+ D TY+SLI CN GK + +M EM+ + I+PD T+
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI + L EA +L+ EM+ RG++PD TY L+ + + +A + D M+
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
KG PD VTY+ +I+ C R ++ + + R + GL P+ ++Y+T++ GF
Sbjct: 379 KGCEPDI--------VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHL 398
C+ +L A +L EM + + SV+ T+ L+ G L
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVP------------PSVV-------TYGILLDGLCDNGEL 471
Query: 399 EKAY-LLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIY 457
KA + E+ L + + Y++ ++ + +++ +A L +S ++ P + Y
Sbjct: 472 NKALEIFEKMQKSRMTLGIGI-YNIIIHGMCNASKVDDA-WSLFCSLSDKGVK-PDVVTY 528
Query: 458 DTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRC 517
+ +I G +G + +A +M E PD YN+LI H
Sbjct: 529 NVMI---------------GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 573
Query: 518 GNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNK 557
+ + ++ EM GF+ ++ +I+ L RR +K
Sbjct: 574 SGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLDK 612
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/560 (23%), Positives = 244/560 (43%), Gaps = 65/560 (11%)
Query: 7 LFKTFLRNRVPPPDVMIRGFAAAWTETEKTNW-----KGLA------DETTYNKLVLACC 55
LF++ +++R P + +A T++ + KG+ D T ++ C
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 56 RDGRVEEALGILRGMA-----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSV 110
R ++ A +L G A E D T+++L++ FC +G+ +A + M++ P +
Sbjct: 117 RKKKLLFAFSVL-GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 175
Query: 111 ATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQE 170
T + ++ C R EAL ++ ++E GF+P+ +++ ++ C G A +L ++
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 171 MNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQT 230
M ++ + Y+ +I C G + A + EM KGI D TY LIG LC
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 231 LSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIS 290
+ + +EM+ R + PD T++ L+ + + + +A L +EMI +G PD
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD------ 349
Query: 291 TSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
+TYN++I G C + EA ++ M G PD V+YS +I +C+ + + +L
Sbjct: 350 --TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 351 KVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINY 410
E+ K + + + T++ L+ + G L A L +E+
Sbjct: 408 FREISSKGL-------------------IPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 411 FDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFI-IYDTLIEN-CSNNE 468
P V Y + L+ L + +A L F RM I IY+ +I C+ ++
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKA---LEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Query: 469 FKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYM 528
L +G+ KPD YN++I C+ G++ +A ++
Sbjct: 506 VDDAWSLFCSLSDKGV----------------KPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 529 EMVHYGFAPHMFSVLALIEA 548
+M G P F+ LI A
Sbjct: 550 KMKEDGCTPDDFTYNILIRA 569
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 138/255 (54%), Gaps = 7/255 (2%)
Query: 39 KGLADET-TYNKLVLACCRDGRVEEA-----LGILRGMAESDENTYTSLIHLFCDQGQCD 92
+G+A +T TYN L+ C++ + EA L + +G E D TY+ LI+ +C + D
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG-CEPDIVTYSILINSYCKAKRVD 402
Query: 93 KAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALV 152
++F E+ G P+ TYN +VL +C+ + A + + ++ RG P+++++ L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 153 QGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL 212
G C G++ +A E+ ++M + + L Y +IH CN KV+ A+ + + KG+
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 213 PDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHL 272
PD TY +IG LC + +LSEA LF++M G +PD+ TY L+ A+ + + L
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582
Query: 273 QDEMIHKGFLPDFVT 287
+EM GF D T
Sbjct: 583 IEEMKVCGFSADSST 597
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 200/480 (41%), Gaps = 46/480 (9%)
Query: 90 QCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFN 149
+ + A +F MI + P+ +N + A R K++ LG + + G E ++ +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 150 ALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK 209
++ +C K K+ A +L + G D T+++L++ FC +G+V +A + MV
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 210 GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKA 269
PD T LI LCL+ +SEA L M+ G PD TY +++ + A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 270 FHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAV 329
L +M + I S V Y+ +I LC ++AL + M G+ D V
Sbjct: 230 LDLFRKMEER--------NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281
Query: 330 SYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLM 389
+YS++I G C + K+ EM ++I + TFS L+
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNI-------------------IPDVVTFSALI 322
Query: 390 SDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCL 449
++ EG L +A L E+ P + Y+ ++ K+ + EA +S C
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC- 381
Query: 450 RMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYN 508
P + Y LI + C + L + +GL+ P+ YN
Sbjct: 382 -EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI----------------PNTITYN 424
Query: 509 LLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRS 568
L+ C+ G ++ A +++ EMV G P + + L++ LC NK + + +S
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 5/192 (2%)
Query: 39 KGLADET-TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDK 93
KGL T TYN LVL C+ G++ A + + M TY L+ CD G+ +K
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A ++F +M + + + YN I+ C + +A + L ++G +P+++++N ++
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
G C KG + EA+ L ++M + G DD TY LI + + E+ EM G
Sbjct: 534 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSA 593
Query: 214 DADTYGPLIGSL 225
D+ T +I L
Sbjct: 594 DSSTIKMVIDML 605
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAE 100
TY L+ C +G + +AL I M +S Y +IH C+ + D A+ +F
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
+ D G P V TYN ++ C+ EA + R + E G P+ ++N L++ G
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
+ + EL++EM G + D T +I + ++ +++K+F
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDMLSDR-RLDKSF 614
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 240/512 (46%), Gaps = 50/512 (9%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVF 98
D T++ L+ C +GRV EAL ++ M E T +L++ C G+ A +
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M++TGF P+ TY ++ C+ + A+ +LR + ER + + + ++ ++ G C
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G ++ A L EM KG D YT+LI FC G+ + ++ +M+ + I PD +
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI + L EA +L +EM++RG+SPD TYT L+ + + Q KA H+ D M+
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
KG P+ T+N +I+G C + ++ LE+ R M G+ D V+Y+T+I GF
Sbjct: 381 KGCGPNI--------RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHL 398
C + +L A +L EM + + DI ++ L+ G
Sbjct: 433 CELGKLEVAKELFQEMVSRRVR--------PDI-----------VSYKILLDGLCDNGEP 473
Query: 399 EKAYLLEREINYFDYLPVDVH-YSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIY 457
EKA + +I + +D+ Y++ ++ + +++ +A W ++
Sbjct: 474 EKALEIFEKIEK-SKMELDIGIYNIIIHGMCNASKVDDA-----WD------------LF 515
Query: 458 DTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRC 517
+L + K+ ++ G +G + +A +M E + P+G YN+LI H
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 518 GNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
G+ K+ + E+ GF+ +V +++ L
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 215/489 (43%), Gaps = 41/489 (8%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
++ L + Q D + +M G + ++ T + ++ CR ++ A + +I
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
+ G+EP+ ++F+ L+ G C +G++ EA EL+ M + G T +L++ C GKV
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
A + MV G P+ TYGP++ +C + A +L ++M R + D Y+ ++
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
AF+L +EM KGF D + Y +I G C R ++ ++LR
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADI--------IIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS--WLGLWGLYD------ 369
M + ++PD V++S +I F + +L +A +L EM ++ IS + L D
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 370 DIDKS-------VMQGLSHE-DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYS 421
+DK+ V +G TF+ L++ Y ++ L R+++ + V Y+
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 422 VFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGM 481
+ + ++ AK +S P + Y L++ +N
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRV--RPDIVSYKILLDGLCDN-------------- 470
Query: 482 RGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFS 541
G +KA +++ + + D +YN++I C V A+D++ + G P + +
Sbjct: 471 -GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 542 VLALIEALC 550
+I LC
Sbjct: 530 YNIMIGGLC 538
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 144/357 (40%), Gaps = 46/357 (12%)
Query: 195 KVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYT 254
K + A ++ EM P + L + + DL ++M +G++ + T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 255 GLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALE 314
+++ + S AF ++I G+ PD VT++ +I+GLCL R EALE
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPD--------TVTFSTLINGLCLEGRVSEALE 163
Query: 315 ILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKS 374
++ M E+G P ++ + ++ G C ++ A L ID+
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL--------------------IDRM 203
Query: 375 VMQGLS-HEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARI 433
V G +E T+ ++ G A L R++ V YS+ ++ L K +
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 434 TEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHD 493
A + L+ + IIY TLI +GF G A+
Sbjct: 264 DNAFN--LFNEMEIKGFKADIIIYTTLI---------------RGFCYAGRWDDGAKLLR 306
Query: 494 RMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
M++ PD ++ LI + G + +A +++ EM+ G +P + +LI+ C
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 144/564 (25%), Positives = 251/564 (44%), Gaps = 50/564 (8%)
Query: 44 ETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFA 99
E + LV + G++EEAL +++ + + + Y +LI C + +A +F
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFD 391
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
M G P+ TY+ ++ +CR + AL L +++ G + ++ +N+L+ G C G
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ AE + EM K L TYTSL+ +C+KGK+ KA + EM KGI P T+
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
L+ L + +A LF EM + P+ TY ++ Y + SKAF EM K
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
G +PD +Y +IHGLCL +A EA + G+ + + + Y+ ++ GFC
Sbjct: 572 GIVPD--------TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 340 RIRELGKAYKLKVEMDKKSISW-LGLWGLYDD-----IDKSVM---------QGLSHEDT 384
R +L +A + EM ++ + L +G+ D D+ + +GL +D
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683
Query: 385 FSNLMSDYLAE-GHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWF 443
M D ++ G ++A+ + + +P +V Y+ +N L K + EA+ +L
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE--VLCS 741
Query: 444 ISHVCLRMPTFIIYDTLIENCSNNE-------------FKSVVG-------LVKGFGMRG 483
+P + Y ++ + E K ++ L++GF +G
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQG 801
Query: 484 LMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVL 543
+++A+ RM+ PD Y +I + CR +V KA +++ M G P +
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 544 ALIEALCCVRRYNKMSWVIQNTLR 567
LI C K + + LR
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLR 885
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 158/575 (27%), Positives = 246/575 (42%), Gaps = 77/575 (13%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
YN L+ C+ +V EA+GI + +A + D TY +L++ C + + ++ EM+
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
FSPS A +++V + + EAL +++ +++ G PNL +NAL+ C K
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
EAE L M + GL +D TY+ LI +FC +GK++ A EMV G+ Y LI
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
C +S A EM+ + L P TYT LM Y + + +KA L EM KG
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 283 PDFVT---------------------------GISTSHVTYNAIIHGLCLLDRAEEALEI 315
P T + + VTYN +I G C +A E
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDK--------KSISWLGLWGL 367
L+ M E G+ PD SY +I G C G+A + KV +D I + GL
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLT---GQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 368 YDDIDK-----SVMQGLSHEDTFSNLMS-DYLAEGHLEKA-----YLLEREINYFDYLPV 416
+ K SV Q + +L+ L +G L+ + L +E++ P
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 417 DVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN------------- 463
DV Y+ ++ +K EA I+ C+ P + Y +I
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV--PNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 464 CSNNEFKSVVGLVKGFG------MRGL--MKKAARAHDRMLEGNYKPDGAVYNLLIFDHC 515
CS + S V +G +G M+KA H+ +L+G + A YN+LI C
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG-LLANTATYNMLIRGFC 798
Query: 516 RCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
R G + +A ++ M+ G +P + +I LC
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 143/555 (25%), Positives = 239/555 (43%), Gaps = 94/555 (16%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
YN L+ + C+ + EA + M + ++ TY+ LI +FC +G+ D A EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+DTG SV YN+++ +C+ A G + +I + EP ++++ +L+ G+C KGK+
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+A L EM KG+A T+T+L+ G + A ++ EM + P+ TY +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I C + +S+AF+ +EM +G+ PD +Y L+ L Q S+A D + HKG
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL-HKG- 606
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
+ + Y ++HG C + EEAL + + M + G+ D V Y +I G +
Sbjct: 607 ------NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 342 RELGKAYKLKVEM----------------DKKSISW-----LGLWGLYDDIDKSVMQG-L 379
++ + L EM D KS + G+W D + +G +
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW------DLMINEGCV 714
Query: 380 SHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNK---------- 429
+E T++ +++ G + +A +L ++ +P V Y FL++L K
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774
Query: 430 -------------------------KARITEAKHHLLWFISHVCLRMPTFIIYDTLI-EN 463
+ RI EA + I P I Y T+I E
Sbjct: 775 LHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV--SPDCITYTTMINEL 832
Query: 464 CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKA 523
C N+ +KKA + M E +PD YN LI C G + KA
Sbjct: 833 CRRND----------------VKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876
Query: 524 YDMYMEMVHYGFAPH 538
++ EM+ G P+
Sbjct: 877 TELRNEMLRQGLIPN 891
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 140/596 (23%), Positives = 250/596 (41%), Gaps = 65/596 (10%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D YT +I C+ +A ++ A M TG ++ YN ++ C+ ++ EA+GI
Sbjct: 226 DVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIK 285
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ L + +P+++++ LV G C + E E++ EM + + +SL+ +
Sbjct: 286 KDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKR 345
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
GK+E+A + +V G+ P+ Y LI SLC + EA LF M + GL P++ TY
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
+ L+ + + + A EM+ TG+ S YN++I+G C A
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVD--------TGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI-----------SWL 362
+ M L P V+Y++++ G+C ++ KA +L EM K I S L
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 363 GLWGLYDDIDK-----SVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVD 417
GL D K + + T++ ++ Y EG + KA+ +E+ +P
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 418 VHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLV 476
Y ++ L + +EAK + C I Y L+ C + + + +
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNC--ELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 477 KGFGMRG----------LMKKAARAHDRML---------EGNYKPDGAVYNLLIFDHCRC 517
+ RG L+ + + DR L + KPD +Y +I +
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 518 GNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC----------CVRRYNKMSWVIQNTLR 567
G+ +A+ ++ M++ G P+ + A+I LC + +S V
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 568 SCNLNDSELLQVLNEIDVREG---QTEYLRGELAERAMDGLLLDG--RKGSYASAS 618
C L+ + E+D+++ L+G LA A +L+ G R+G AS
Sbjct: 756 GCFLD----ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 169/366 (46%), Gaps = 49/366 (13%)
Query: 34 EKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQG 89
E W + TYN ++ C +G + +A L+ M E D +Y LIH C G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 90 QCDKAYKVFAEMIDTGFSP-SVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISF 148
Q +A KVF + + G + Y ++ +CR+ + EAL + + +++RG + +L+ +
Sbjct: 592 QASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Query: 149 NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH 208
L+ G + LL+EM+ +GL DD YTS+I G ++AF + M++
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEM--------------------------- 241
+G +P+ TY +I LC ++EA L +M
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Query: 242 --------LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSH 293
+ +GL + TY L+ + Q + +A L MI G PD +T
Sbjct: 771 KAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT------ 824
Query: 294 VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVE 353
Y +I+ LC + ++A+E+ M E G+ PD V+Y+T+I G C E+GKA +L+ E
Sbjct: 825 --YTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 354 MDKKSI 359
M ++ +
Sbjct: 883 MLRQGL 888
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 156/360 (43%), Gaps = 82/360 (22%)
Query: 14 NRVPPPDVMIRGF------AAAWTETEKTNWKGLADET-TYNKLVLACCRDGRVEEAL-- 64
NRV +VMI G+ + A+ ++ KG+ +T +Y L+ C G+ EA
Sbjct: 541 NRVTY-NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 65 --GILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI-------------------- 102
G+ +G E +E YT L+H FC +G+ ++A V EM+
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 103 ---------------DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS 147
D G P Y +++ A + F+EA GI +I G PN ++
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 148 FNALVQGFCGKGKMEEAEELLQEM-------NQ--------------------------- 173
+ A++ G C G + EAE L +M NQ
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 174 -KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLS 232
KGL + TY LI FC +G++E+A E+ M+ G+ PD TY +I LC + +
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 233 EAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTS 292
+A +L+ M +G+ PD Y L+ + + KA L++EM+ +G +P+ T +T+
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTT 899
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 128/583 (21%), Positives = 228/583 (39%), Gaps = 113/583 (19%)
Query: 125 RFREALGILRCLIERGFEPNLISFNALVQGFCGKG-----------------KMEEAEEL 167
RF LG+ RGF+ + SF L+ K + +
Sbjct: 89 RFFNFLGL-----HRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNV 143
Query: 168 LQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK-GILPDADTYGPLIGSLC 226
L +K ++ LI + +V + M+ K +LP+ T L+ L
Sbjct: 144 LFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLV 203
Query: 227 LQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFV 286
+ A +LF +M+ G+ PD YTG++ + S+A + M
Sbjct: 204 KFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM--------EA 255
Query: 287 TGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGK 346
TG + V YN +I GLC + EA+ I + + L PD V+Y T+++G C+++E
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 347 AYKLKVEM-------DKKSISWLGLWGL---------YDDIDKSVMQGLSHEDTFSNLMS 390
++ EM + ++S L + GL + + + V G+S N +
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSL-VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Query: 391 DYLAEGH-LEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHL--------- 440
D L +G +A LL + P DV YS+ +++ ++ ++ A L
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 441 ----------------------LWFISHVCLRM--PTFIIYDTLIEN-CSNNEFK----- 470
F++ + + PT + Y +L+ CS +
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 471 --------------SVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCR 516
+ L+ G GL++ A + + M E N KP+ YN++I +C
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 517 CGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLR-SCNLNDSE 575
G++ KA++ EM G P +S LI LC + ++ + + +C LN+
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 576 LLQVLNEIDVREGQTE---YLRGELAERAMD------GLLLDG 609
+L+ REG+ E + E+ +R +D G+L+DG
Sbjct: 615 YTGLLHGF-CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 145/568 (25%), Positives = 243/568 (42%), Gaps = 88/568 (15%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TY +V C G ++ A I++ M S + YT+LI F + A +V EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ G +P + YN++++ + KR EA L ++E G +PN ++ A + G+ +
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
A++ ++EM + G+ + T LI+ +C KGKV +A MV +GIL DA TY L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
+ L + +A ++F+EM +G++PD +Y L++ + KA + DEM+ +G
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
P+ + YN ++ G C E+A E+L M GL P+AV+Y T+I G+C+
Sbjct: 659 TPNV--------IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 342 RELGKAYKLKVEMDKKS------------------------------------------- 358
+L +A++L EM K
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFN 770
Query: 359 --ISWLGLWG---LYDDIDKSVMQGL-----SHEDTFSNLMSDYLA-EGHLEKAYLLERE 407
I+W+ +G L ++ +M G D N+M DYL EG+LE A L +
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 408 INYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNN 467
+ + +P + Y+ LN +K R R F ++D I
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGR-----------------RAEMFPVFDEAIAAGIEP 873
Query: 468 EFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNL-----LIFDHCRCGNVHK 522
+ ++ F G+ KA D+M N DG ++ L+ + G +
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 523 AYDMYMEMVHYGFAPHMFSVLALIEALC 550
A + MV + P +V+ LI C
Sbjct: 934 AEKVMENMVRLQYIPDSATVIELINESC 961
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 143/608 (23%), Positives = 247/608 (40%), Gaps = 87/608 (14%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENT----YTSLIHLFCDQGQCDKAYKVF 98
D TY+ L+ + + A G++ M N Y I + +G +KA +F
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
MI +G P Y +++ YCR+K R+ +L + +R + ++ +V+G C
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G ++ A +++EM G + YT+LI F + A + EM +GI PD Y
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI L + + EA EM+ GL P+ TY +S Y ++F+ A EM
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 279 KGFLPDFV---------------------------TGISTSHVTYNAIIHGLCLLDRAEE 311
G LP+ V GI TY +++GL D+ ++
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDI 371
A EI R M G++PD SY +I GF ++ + KA +
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI--------------------F 650
Query: 372 DKSVMQGLSHEDTFSN-LMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKK 430
D+ V +GL+ N L+ + G +EKA L E++ P V Y ++ K
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 431 ARITEAKHHLLWFISHVCLR--MPTFIIYDTLIENC----------------------SN 466
+ EA + L+ +P +Y TL++ C S
Sbjct: 711 GDLAEA----FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASST 766
Query: 467 NEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNY----KPDGAVYNLLIFDHCRCGNVHK 522
F +++ V FG L +R+++G++ KP+ YN++I C+ GN+
Sbjct: 767 APFNALINWVFKFGKTEL---KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 523 AYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLNE 582
A +++ +M + P + + +L+ + R +M V + + D + V+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 583 IDVREGQT 590
++EG T
Sbjct: 884 AFLKEGMT 891
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/603 (23%), Positives = 241/603 (39%), Gaps = 68/603 (11%)
Query: 43 DETTYNKLVLACCRDGRVEEALGIL--------------RGMAESDEN-----------T 77
D TY+ L++A CR G V+ +L G + E+ T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
Y LI C + + A + EM G S TY+ ++ + + A G++ ++
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
G ++ + +G ME+A+ L M GL + Y SLI +C + V
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
+ +E+ EM + I+ TYG ++ +C L A+++ +EM+ G P+ YT L+
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
+ ++F A + EM +G PD YN++I GL R +EA L
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDI--------FCYNSLIIGLSKAKRMDEARSFLV 511
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDK-----KSISWLGLWGLYDDID 372
M E GL P+A +Y I G+ E A K EM + + GL Y
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 373 KS----------VMQG-LSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYS 421
K V QG L T++ LM+ ++ A + RE+ P Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 422 VFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGM 481
V +N +K + +A + P IIY+ L+ GF
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGL--TPNVIIYNMLL---------------GGFCR 674
Query: 482 RGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFS 541
G ++KA D M P+ Y +I +C+ G++ +A+ ++ EM G P F
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 542 VLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLNEIDVREGQTEYLRGELAERA 601
L++ C + + + + C + + ++N + + G+TE L+ E+ R
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWV-FKFGKTE-LKTEVLNRL 792
Query: 602 MDG 604
MDG
Sbjct: 793 MDG 795
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 143/663 (21%), Positives = 255/663 (38%), Gaps = 96/663 (14%)
Query: 6 VLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALG 65
V+ RV P ++ F W +++K + L +++ L L C G E+AL
Sbjct: 64 VVLSVLRSKRVDDPSKLLSFFN--WVDSQKVTEQKL---DSFSFLALDLCNFGSFEKALS 118
Query: 66 ILRGMAESD---ENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCR 122
++ M E + ++S++ +C + + G S + + Y
Sbjct: 119 VVERMIERNWPVAEVWSSIV-------RCSQEF--------VGKSDDGVLFGILFDGYIA 163
Query: 123 DKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKT 182
EA+ + + P L L+ +++ ++ + M ++ + D KT
Sbjct: 164 KGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKT 223
Query: 183 YTSLIHLFCNKGKVE---------------------KAFEMKAEMVHKGILPDADTYGPL 221
Y LI C G V+ A ++K M+ KG++P TY L
Sbjct: 224 YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVL 283
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I LC + L +A L EM G+S DN TY+ L+ A L EM+
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH-- 341
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRA---EEALEILRGMPEIGLSPDAVSYSTVIFGF 338
GI+ Y+ I C++ + E+A + GM GL P A +Y+++I G+
Sbjct: 342 ------GINIKPYMYDCCI---CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392
Query: 339 CRIRELGKAYKLKVEMDKKSI---------------SWLGLWGLYDDIDKSVMQGL-SHE 382
CR + + + Y+L VEM K++I S L G Y+ + + + G +
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 383 DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLW 442
++ L+ +L A + +E+ P Y+ + L+K R+ EA+ L+
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 443 FISHVCLRMPTFIIYDTLIEN-CSNNEFKSV-------------------VGLVKGFGMR 482
+ + P Y I +EF S GL+ + +
Sbjct: 513 MVENGL--KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 483 GLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSV 542
G + +A A+ M++ D Y +L+ + V A +++ EM G AP +FS
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 543 LALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLNEIDVREGQTEYLRGELAERAM 602
LI + K S + + + + +L R G+ E + L E ++
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 603 DGL 605
GL
Sbjct: 691 KGL 693
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 36 TNWKGLADETT-YNKLVLACCRDGRVEEALGILRGM--------AESDENTYTSLIHLFC 86
TN KG A T +N L+ + G+ E +L + + ++ TY +I C
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 87 DQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLI 146
+G + A ++F +M + P+V TY +++ Y + R E + I G EP+ I
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI 876
Query: 147 SFNALVQGFCGKGKMEEAEELLQEMNQK-----GLALDDKTYTSLIHLFCNKGKVEKAFE 201
++ ++ F +G +A L+ +M K G L T +L+ F G++E A +
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Query: 202 MKAEMVHKGILPDADTYGPLIGSLCLQQT 230
+ MV +PD+ T LI C+
Sbjct: 937 VMENMVRLQYIPDSATVIELINESCISSN 965
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/542 (25%), Positives = 240/542 (44%), Gaps = 65/542 (11%)
Query: 69 GMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFRE 128
G+ S ++ L L D + A VF E + G +VA+YN ++ C+ R +E
Sbjct: 205 GLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKE 264
Query: 129 ALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
A +L + +G+ P++IS++ +V G+C G++++ +L++ M +KGL + Y S+I
Sbjct: 265 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 189 LFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
L C K+ +A E +EM+ +GILPD Y LI C + + A F EM R ++P
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT--------------------- 287
D TYT ++S + +A L EM KG PD VT
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 288 ------GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
G S + VTY +I GLC + A E+L M +IGL P+ +Y++++ G C+
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
+ +A KL E + ++ + T++ LM Y G ++KA
Sbjct: 505 GNIEEAVKLVGEFEAAGLN-------------------ADTVTYTTLMDAYCKSGEMDKA 545
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLI 461
+ +E+ P V ++V +N + + + L W ++ P +++L+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI--APNATTFNSLV 603
Query: 462 EN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNV 520
+ C N K+ + K RG+ PDG Y L+ HC+ N+
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGV----------------GPDGKTYENLVKGHCKARNM 647
Query: 521 HKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVL 580
+A+ ++ EM GF+ + + LI+ +++ + V R D E+
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707
Query: 581 NE 582
++
Sbjct: 708 SD 709
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 166/364 (45%), Gaps = 32/364 (8%)
Query: 29 AWTETEKTNWKGLADET-TYNKLV-LAC--CRDGRVEEALG-ILRGMAESDENTYTSLIH 83
W E KGL + Y ++ L C C+ EEA ++R D YT+LI
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
FC +G A K F EM +P V TY AI+ +C+ EA + + +G EP
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
+ ++F L+ G+C G M++A + M Q G + + TYT+LI C +G ++ A E+
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQ 263
EM G+ P+ TY ++ LC + EA L E GL+ D TYT LM AY
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 264 AQFSKAFHLQDEMIHKGFLPDFVT---------------------------GISTSHVTY 296
+ KA + EM+ KG P VT GI+ + T+
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 297 NAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDK 356
N+++ C+ + + A I + M G+ PD +Y ++ G C+ R + +A+ L EM
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 357 KSIS 360
K S
Sbjct: 660 KGFS 663
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 176/364 (48%), Gaps = 13/364 (3%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY ++ C+ G + EA + M E D T+T LI+ +C G A++V
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
MI G SP+V TY ++ C++ A +L + + G +PN+ ++N++V G C
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G +EEA +L+ E GL D TYT+L+ +C G+++KA E+ EM+ KG+ P T+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
L+ CL L + L ML +G++P+ T+ L+ Y ++ A + +M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
+G PD TY ++ G C +EA + + M G S +YS +I GF
Sbjct: 625 RGVGPD--------GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Query: 339 CRIRELGKAYKLKVEMDKKSISW-LGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGH 397
+ ++ +A ++ +M ++ ++ ++ + D + + D ++ +YL +
Sbjct: 677 LKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736
Query: 398 LEKA 401
L A
Sbjct: 737 LRGA 740
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/542 (25%), Positives = 240/542 (44%), Gaps = 65/542 (11%)
Query: 69 GMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFRE 128
G+ S ++ L L D + A VF E + G +VA+YN ++ C+ R +E
Sbjct: 205 GLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKE 264
Query: 129 ALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
A +L + +G+ P++IS++ +V G+C G++++ +L++ M +KGL + Y S+I
Sbjct: 265 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 189 LFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
L C K+ +A E +EM+ +GILPD Y LI C + + A F EM R ++P
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT--------------------- 287
D TYT ++S + +A L EM KG PD VT
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 288 ------GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
G S + VTY +I GLC + A E+L M +IGL P+ +Y++++ G C+
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
+ +A KL E + ++ + T++ LM Y G ++KA
Sbjct: 505 GNIEEAVKLVGEFEAAGLN-------------------ADTVTYTTLMDAYCKSGEMDKA 545
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLI 461
+ +E+ P V ++V +N + + + L W ++ P +++L+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI--APNATTFNSLV 603
Query: 462 EN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNV 520
+ C N K+ + K RG+ PDG Y L+ HC+ N+
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGV----------------GPDGKTYENLVKGHCKARNM 647
Query: 521 HKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVL 580
+A+ ++ EM GF+ + + LI+ +++ + V R D E+
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707
Query: 581 NE 582
++
Sbjct: 708 SD 709
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 166/364 (45%), Gaps = 32/364 (8%)
Query: 29 AWTETEKTNWKGLADET-TYNKLV-LAC--CRDGRVEEALG-ILRGMAESDENTYTSLIH 83
W E KGL + Y ++ L C C+ EEA ++R D YT+LI
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
FC +G A K F EM +P V TY AI+ +C+ EA + + +G EP
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
+ ++F L+ G+C G M++A + M Q G + + TYT+LI C +G ++ A E+
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQ 263
EM G+ P+ TY ++ LC + EA L E GL+ D TYT LM AY
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 264 AQFSKAFHLQDEMIHKGFLPDFVT---------------------------GISTSHVTY 296
+ KA + EM+ KG P VT GI+ + T+
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 297 NAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDK 356
N+++ C+ + + A I + M G+ PD +Y ++ G C+ R + +A+ L EM
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 357 KSIS 360
K S
Sbjct: 660 KGFS 663
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 176/364 (48%), Gaps = 13/364 (3%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY ++ C+ G + EA + M E D T+T LI+ +C G A++V
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
MI G SP+V TY ++ C++ A +L + + G +PN+ ++N++V G C
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G +EEA +L+ E GL D TYT+L+ +C G+++KA E+ EM+ KG+ P T+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
L+ CL L + L ML +G++P+ T+ L+ Y ++ A + +M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
+G PD TY ++ G C +EA + + M G S +YS +I GF
Sbjct: 625 RGVGPD--------GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Query: 339 CRIRELGKAYKLKVEMDKKSISW-LGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGH 397
+ ++ +A ++ +M ++ ++ ++ + D + + D ++ +YL +
Sbjct: 677 LKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736
Query: 398 LEKA 401
L A
Sbjct: 737 LRGA 740
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 151/579 (26%), Positives = 262/579 (45%), Gaps = 69/579 (11%)
Query: 7 LFKTFLRNRVPPPDVMIRGFAAAWTETEKTNW----------KGLADET-TYNKLV---L 52
LF+ +R+R P V F +A T++ N G+A T N ++
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 53 ACCRDGRVEEALG-ILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVA 111
CC+ LG +++ E D T+ +LI +G+ +A + M++ G P V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 112 TYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM 171
TYN+IV CR AL +LR + ER + ++ +++ ++ C G ++ A L +EM
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 172 NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTL 231
KG+ TY SL+ C GK + +MV + I+P+ T+ L+ + L
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 232 SEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIST 291
EA +L++EM+ RG+SP+ TY LM Y +Q + S+A ++ D M+ PD
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI------ 368
Query: 292 SHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLK 351
VT+ ++I G C++ R ++ +++ R + + GL +AV+YS ++ GFC + GK KL
Sbjct: 369 --VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC---QSGK-IKLA 422
Query: 352 VEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYF 411
E+ ++ +S G+ D+ T+ L+ G LEKA + ++
Sbjct: 423 EELFQEMVS----HGVLPDV-----------MTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 412 DYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRM-PTFIIYDTLIENCSNNEFK 470
V Y+ + + K ++ +A + F S C + P + Y +I
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWN---LFCSLPCKGVKPNVMTYTVMIS-------- 516
Query: 471 SVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEM 530
G +G + +A +M E P+ YN LI H R G++ + + EM
Sbjct: 517 -------GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Query: 531 VHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSC 569
GF+ S+ +I+ L +S + + TLR C
Sbjct: 570 KSCGFSADASSIKMVIDML--------LSAMKRLTLRYC 600
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 162/403 (40%), Gaps = 68/403 (16%)
Query: 195 KVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYT 254
K + A + EM+ LP + ++ + + D +++ G++ + T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 255 GLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT--------------------------- 287
+++ + + A+ + +++ G+ PD T
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 288 GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA 347
G VTYN+I++G+C AL++LR M E + D +YST+I CR + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 348 YKLKVEMDKKSISW--------------LGLWG-----LYDDIDKSVMQGLSHEDTFSNL 388
L EM+ K I G W L D + + ++ + TF+ L
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI---TFNVL 304
Query: 389 MSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVC 448
+ ++ EG L++A L +E+ P + Y+ ++ + R++EA + L + + C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 449 LRMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVY 507
P + + +LI+ C + + + RGL+ A Y
Sbjct: 365 --SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA----------------VTY 406
Query: 508 NLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
++L+ C+ G + A +++ EMV +G P + + L++ LC
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 182/343 (53%), Gaps = 25/343 (7%)
Query: 15 RVPPPDV-----MIRGF--------AAAWTETEKTNWKGLADETTYNKLVLACCRDGRVE 61
R+P P++ +I GF A A T++ + D TYN L+ ++G V
Sbjct: 347 RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 62 EALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIV 117
AL +L M + + +YT L+ FC G+ D+AY V EM G P+ +N ++
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 118 LAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLA 177
A+C++ R EA+ I R + +G +P++ +FN+L+ G C +++ A LL++M +G+
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 178 LDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDL 237
+ TY +LI+ F +G++++A ++ EMV +G D TY LI LC + +A L
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 238 FQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYN 297
F++MLR G +P N + L++ +A Q EM+ +G PD VT+N
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI--------VTFN 638
Query: 298 AIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
++I+GLC R E+ L + R + G+ PD V+++T++ C+
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 233/511 (45%), Gaps = 55/511 (10%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
T+ ++ A C ++ AL +LR M + + Y +LIH + ++A ++ EM
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G P T+N ++L C+ R EA ++ ++ RGF P+ I++ L+ G C G++
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK-GILPDADTYGP 220
+ A++L + + + + + +LIH F G+++ A + ++MV GI+PD TY
Sbjct: 339 DAAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
LI + + A ++ +M +G P+ +YT L+ + + +A+++ +EM G
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
P+ V +N +I C R EA+EI R MP G PD +++++I G C
Sbjct: 455 LKPN--------TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 341 IRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEK 400
+ E+ A LW L D I + V +++ T++ L++ +L G +++
Sbjct: 507 VDEIKHA----------------LWLLRDMISEGV---VANTVTYNTLINAFLRRGEIKE 547
Query: 401 AYLLEREINYFDYLPVD-VHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
A L E+ F P+D + Y+ + L + + +A+ +++
Sbjct: 548 ARKLVNEM-VFQGSPLDEITYNSLIKGLCRAGEVDKARS-----------------LFEK 589
Query: 460 LIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGN 519
++ + S L+ G G++++A M+ PD +N LI CR G
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 520 VHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
+ M+ ++ G P + L+ LC
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 201/418 (48%), Gaps = 44/418 (10%)
Query: 21 VMIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTS 80
++IRGFA D+ TY L+ C+ GRV+ A + + + + + +
Sbjct: 313 MLIRGFAP--------------DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRCLIER 139
LIH F G+ D A V ++M+ + G P V TYN+++ Y ++ AL +L + +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 140 GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKA 199
G +PN+ S+ LV GFC GK++EA +L EM+ GL + + LI FC + ++ +A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 200 FEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
E+ EM KG PD T+ LI LC + A L ++M+ G+ + TY L++A
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 260 YRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM 319
+ + + +A L +EM+ +G D +TYN++I GLC ++A + M
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLD--------EITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 320 PEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGL 379
G +P +S + +I G CR + +A + + EM V++G
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM--------------------VLRGS 630
Query: 380 SHED-TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
+ + TF++L++ G +E + R++ P V ++ ++ L K + +A
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 219/501 (43%), Gaps = 61/501 (12%)
Query: 75 ENTYTSLIHLFCDQGQCDKAYKVFAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGIL 133
E+ + S++ + G + ++ EM + P+ +YN ++ + A +
Sbjct: 146 ESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF 205
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
++ R P L +F +++ FC +++ A LL++M + G + Y +LIH
Sbjct: 206 YDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKC 265
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
+V +A ++ EM G +PDA+T+ +I LC ++EA + ML RG +PD+ TY
Sbjct: 266 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Query: 254 TGLMSAY----RLQAQFSKAFHLQ-------DEMIH-----------KGFLPDFVT--GI 289
LM+ R+ A + + + +IH K L D VT GI
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
TYN++I+G ALE+L M G P+ SY+ ++ GFC++ ++ +AY
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 350 LKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREIN 409
+ EM + + F+ L+S + E + +A + RE+
Sbjct: 446 VLNEMSADGLK-------------------PNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 410 YFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEF 469
P DV+ F ++++ + E KH LW + + + ++ +T+ N
Sbjct: 487 RKGCKP-DVY--TFNSLISGLCEVDEIKHA-LWLLRDM---ISEGVVANTVTYNT----- 534
Query: 470 KSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYME 529
L+ F RG +K+A + + M+ D YN LI CR G V KA ++ +
Sbjct: 535 -----LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 530 MVHYGFAPHMFSVLALIEALC 550
M+ G AP S LI LC
Sbjct: 590 MLRDGHAPSNISCNILINGLC 610
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 28 AAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIH 83
A W + + +A+ TYN L+ A R G ++EA ++ M + DE TY SLI
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
C G+ DKA +F +M+ G +PS + N ++ CR EA+ + ++ RG P
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
++++FN+L+ G C G++E+ + +++ +G+ D T+ +L+ C G V A +
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTL 231
E + G +P+ T+ L+ S+ Q+TL
Sbjct: 693 DEGIEDGFVPNHRTWSILLQSIIPQETL 720
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 4/230 (1%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D T+N L+ C ++ AL +LR M ++ TY +LI+ F +G+ +A K+
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM+ G TYN+++ CR +A + ++ G P+ IS N L+ G C
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G +EEA E +EM +G D T+ SLI+ C G++E M ++ +GI PD T+
Sbjct: 613 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSK 268
L+ LC + +A L E + G P+++T++ L+ + Q +
Sbjct: 673 NTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/494 (20%), Positives = 203/494 (41%), Gaps = 57/494 (11%)
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
+ G+ + + L+ G+ + + LL +M +G+ + + S++ + G
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 198 KAFEMKAEMVHK-GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+ + EM + P +Y ++ L A ++F +ML R + P T+ +
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
M A+ + A L +M G +P+ V Y +IH L +R EAL++L
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPN--------SVIYQTLIHSLSKCNRVNEALQLL 275
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVM 376
M +G PDA +++ VI G C+ + +A K+ +++ ++
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM--------------------VNRMLI 315
Query: 377 QGLSHED-TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITE 435
+G + +D T+ LM+ G ++ A +++ Y P V ++ ++ R+ +
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 436 AKHHLLWFISHVCLRMPTFIIYDTLI---------------------ENCSNNEFKSVVG 474
AK L ++ + +P Y++LI + C N + +
Sbjct: 372 AKAVLSDMVTSYGI-VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI- 429
Query: 475 LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYG 534
LV GF G + +A + M KP+ +N LI C+ + +A +++ EM G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 535 FAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLNEIDVREGQTEYLR 594
P +++ +LI LC V W++++ + + ++ L +R G+ + R
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 595 GELAERAMDGLLLD 608
+ E G LD
Sbjct: 550 KLVNEMVFQGSPLD 563
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 235/510 (46%), Gaps = 55/510 (10%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TY+ L+ CR ++ AL +L M E D T SL++ FC + A + +M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
++ G+ P T+N ++ R R EA+ ++ ++ +G +P+L+++ +V G C +G +
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+ A LL++M Q + Y ++I CN V A + EM +KGI P+ TY L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I LC S+A L +M+ R ++P+ T++ L+ A+ + + +A L DEMI +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
PD TY+++I+G C+ DR +EA + M P+ V+Y+T+I GFC+
Sbjct: 358 DPDI--------FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
+ + + +L EM ++ GL G + T++ L+ + + A
Sbjct: 410 KRVDEGMELFREMSQR-----GLVG--------------NTVTYTTLIHGFFQARECDNA 450
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRM-PTFIIYDTL 460
++ +++ LP + YS+ L+ L ++ A L+ F +M P Y+ +
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA---LVVFEYLQRSKMEPDIYTYNIM 507
Query: 461 IEN--------------CS------NNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNY 500
IE CS + ++ GF +GL ++A M E
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 501 KPDGAVYNLLIFDHCRCGNVHKAYDMYMEM 530
PD YN LI H R G+ + ++ EM
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 187/386 (48%), Gaps = 31/386 (8%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILR----GMAESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY +V C+ G ++ AL +L+ G E Y ++I C+ + A +F
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM + G P+V TYN+++ C R+ +A +L +IER PN+++F+AL+ F +
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+ EAE+L EM ++ + D TY+SLI+ FC ++++A M M+ K P+ TY
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C + + E +LF+EM +RGL + TYT L+ + + A + +M+
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
G LPD +TY+ ++ GLC + E AL + + + PD +Y+ +I G
Sbjct: 460 DGVLPDI--------MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHL 398
C+ ++ + L + K + + T++ +MS + +G
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVK-------------------PNVVTYTTMMSGFCRKGLK 552
Query: 399 EKAYLLEREINYFDYLPVDVHYSVFL 424
E+A L RE+ LP Y+ +
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLI 578
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/524 (23%), Positives = 241/524 (45%), Gaps = 45/524 (8%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAESDENT----YTSLIHLFCDQGQCDKAYKVFAEMI 102
Y K+ + D ++++A+ + M +S ++ L+ + D + +M
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+ G S ++ TY+ ++ +CR + AL +L +++ G+EP++++ N+L+ GFC ++
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
+A L+ +M + G D T+ +LIH + +A + MV KG PD TYG ++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
LC + + A L ++M + + P Y ++ A + A +L EM +KG
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
P+ VTYN++I LC R +A +L M E ++P+ V++S +I F +
Sbjct: 289 PNV--------VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340
Query: 343 ELGKAYKLKVEMDKKSI--------SWLGLWGLYDDID--KSVMQGLSHEDTFSNLMS-D 391
+L +A KL EM K+SI S + + ++D +D K + + + +D F N+++ +
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 392 YLAEG-----HLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISH 446
L +G +++ L RE++ + V Y+ ++ + A+ +S
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 447 VCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAV 506
L P + Y L++ NN G ++ A + + +PD
Sbjct: 461 GVL--PDIMTYSILLDGLCNN---------------GKVETALVVFEYLQRSKMEPDIYT 503
Query: 507 YNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
YN++I C+ G V +D++ + G P++ + ++ C
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 212/506 (41%), Gaps = 46/506 (9%)
Query: 88 QGQCDKAYKVFA--EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNL 145
+G+C A F+ FS Y I + D + +A+ + +++ P++
Sbjct: 22 KGKCGTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSI 81
Query: 146 ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE 205
+ F+ L+ K + L ++M G++ + TY+ LI+ FC + ++ A + A+
Sbjct: 82 VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAK 141
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQ 265
M+ G PD T L+ C +S+A L +M+ G PD+ T+ L+ +
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 266 FSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLS 325
S+A L D M+ KG PD VT Y +++GLC + AL +L+ M + +
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVT--------YGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 326 PDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTF 385
P V Y+T+I C + + A L EMD K I + Y+ + + + D
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT--YNSLIRCLCNYGRWSDA- 310
Query: 386 SNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFIS 445
S L+SD ++ER+IN P V +S ++ K+ ++ EA+
Sbjct: 311 SRLLSD-----------MIERKIN-----PNVVTFSALIDAFVKEGKLVEAEK------- 347
Query: 446 HVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGA 505
+YD +I+ + + + L+ GF M + +A + M+ + P+
Sbjct: 348 ----------LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 506 VYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNT 565
YN LI C+ V + +++ EM G + + LI R + V +
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 566 LRSCNLNDSELLQVLNEIDVREGQTE 591
+ L D +L + G+ E
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVE 483
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 39/282 (13%)
Query: 45 TTYNKLVLACCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
T++ L+ A ++G++ EA + ++ + D TY+SLI+ FC + D+A +F
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF----- 155
MI P+V TYN ++ +C+ KR E + + R + +RG N +++ L+ GF
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 156 ------------------------------CGKGKMEEAEELLQEMNQKGLALDDKTYTS 185
C GK+E A + + + + + D TY
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 186 LIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
+I C GKVE +++ + KG+ P+ TY ++ C + EA LF+EM G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
PD+ TY L+ A+ + + L EM F+ D T
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 40/230 (17%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAE 100
TYN L+ C+ RV+E + + R M++ + TYT+LIH F +CD A VF +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL---------------IE------- 138
M+ G P + TY+ ++ C + + AL + L IE
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 139 -------------RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTS 185
+G +PN++++ ++ GFC KG EEA+ L +EM ++G D TY +
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 186 LIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAF 235
LI G + E+ EM + DA T G L+ ++ L ++F
Sbjct: 577 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKSF 625
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 148/574 (25%), Positives = 260/574 (45%), Gaps = 56/574 (9%)
Query: 7 LFKTFLRNRVPPPDVMIRGFAAAWTETEK-----------TNWKGLADETTYNKLVLACC 55
LF +++R P V +A + K N + D +YN L+ C
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126
Query: 56 RDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVA 111
R ++ AL +L M E D T +SL++ +C + +A + +M + P+
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 112 TYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM 171
T+N ++ + EA+ ++ ++ RG +P+L ++ +V G C +G ++ A LL++M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 172 NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTL 231
+ + D YT++I CN V A + EM +KGI P+ TY LI LC
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 232 SEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIST 291
S+A L +M+ R ++P+ T++ L+ A+ + + +A L DEMI + PD
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI------ 360
Query: 292 SHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLK 351
TY+++I+G C+ DR +EA + M P+ V+Y+T+I GFC+ + + + +L
Sbjct: 361 --FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 352 VEMDKK-----SISWLGL-WGLYDDID---------KSVMQGLSHE-DTFSNLMSDYLAE 395
EM ++ ++++ L GL+ D K V G+ + T+S L+
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 396 GHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFI 455
G LEKA ++ + P Y++ + + K ++ E L +S ++ P I
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV-EDGWDLFCSLSLKGVK-PNVI 536
Query: 456 IYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHC 515
IY T+I GF +GL ++A M E P+ YN LI
Sbjct: 537 IYTTMIS---------------GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 516 RCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
R G+ + ++ EM GF ++ +I L
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/572 (23%), Positives = 249/572 (43%), Gaps = 72/572 (12%)
Query: 7 LFKTFLRNRVPPPDVMIRGF---AAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEA 63
L K F + R P +RG AA++ EK + L D ++++A
Sbjct: 19 LAKRFAQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDL--------------KLDDA 64
Query: 64 LGILRGMAESDE----NTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLA 119
+ + M +S + L+ + D + M + S + +YN ++
Sbjct: 65 VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINC 124
Query: 120 YCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD 179
+CR + AL +L +++ G+EP++++ ++L+ G+C ++ EA L+ +M +
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQ 239
T+ +LIH K +A + MV +G PD TYG ++ LC + + A L +
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
+M + + D YT ++ A + A +L EM +KG P+ VTYN++
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV--------VTYNSL 296
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
I LC R +A +L M E ++P+ V++S +I F + +L +A KL EM K+S
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS- 355
Query: 360 SWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA-YLLEREINYFDYLPVDV 418
ID + T+S+L++ + L++A ++ E I+ D P V
Sbjct: 356 -----------IDPDIF-------TYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVV 396
Query: 419 HYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIE--------NCSNNEFK 470
Y+ + K R+ E L +S L T + Y+TLI+ + + FK
Sbjct: 397 TYNTLIKGFCKAKRVEEG-MELFREMSQRGLVGNT-VTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 471 SVVG------------LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCG 518
+V L+ G G ++KA + + + +PD YN++I C+ G
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 519 NVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
V +D++ + G P++ +I C
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 158/395 (40%), Gaps = 44/395 (11%)
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
K+++A +L EM Q + L+ K + + M + I D +Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
LI C + L A + +M++ G PD T + L++ Y + S+A L D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM--- 176
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
FV + VT+N +IHGL L ++A EA+ ++ M G PD +Y TV+ G C
Sbjct: 177 -----FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 340 RIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLE 399
+ ++ A L +M+K I + ++ ++ ++
Sbjct: 232 KRGDIDLALSLLKKMEKGKIE-------------------ADVVIYTTIIDALCNYKNVN 272
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
A L E++ P V Y+ + L R ++A L
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL-----------------SD 315
Query: 460 LIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGN 519
+IE N + L+ F G + +A + +D M++ + PD Y+ LI C
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 520 VHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRR 554
+ +A M+ M+ P++ + LI+ C +R
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 144/346 (41%), Gaps = 49/346 (14%)
Query: 262 LQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPE 321
L + A L EM+ LP S V +N ++ + +++ + + + M
Sbjct: 57 LDLKLDDAVDLFGEMVQSRPLP--------SIVEFNKLLSAIAKMNKFDLVISLGERMQN 108
Query: 322 IGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSH 381
+ +S D SY+ +I FCR +L A + +M K G DI
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK--------LGYEPDIV--------- 151
Query: 382 EDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLL 441
T S+L++ Y + +A L ++ +Y P V ++ ++ L + +EA +
Sbjct: 152 --TLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALID 209
Query: 442 WFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYK 501
++ C P Y T+ V G RG + A +M +G +
Sbjct: 210 RMVARGC--QPDLFTYGTV---------------VNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 502 PDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWV 561
D +Y +I C NV+ A +++ EM + G P++ + +LI LC R++ S +
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 562 IQNTL-RSCNLNDSELLQVLNEIDVREG---QTEYLRGELAERAMD 603
+ + + R N N +++ V+EG + E L E+ +R++D
Sbjct: 313 LSDMIERKINPNVVTFSALIDAF-VKEGKLVEAEKLYDEMIKRSID 357
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/527 (23%), Positives = 228/527 (43%), Gaps = 84/527 (15%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN + C+ G ++ A+ ++ + E D TY +LI+ C + +A +M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
++ G P TYN ++ YC+ + A I+ + GF P+ ++ +L+ G C +G+
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
A L E KG+ + Y +LI N+G + +A ++ EM KG++P+ T+ L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
+ LC +S+A L + M+ +G PD T+ L+ Y Q + A + D M+ G
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
PD TYN++++GLC + E+ +E + M E G +P+ +++ ++ CR
Sbjct: 493 DPDV--------YTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
R+L +A L EM KS++ + TF L+ + G L+ A
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAV-------------------TFGTLIDGFCKNGDLDGA 585
Query: 402 YLLEREI-NYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTL 460
Y L R++ + Y++ ++ +K +T A+ ++ +
Sbjct: 586 YTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEK-----------------LFQEM 628
Query: 461 IENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNV 520
++ C PDG Y L++ C+ GNV
Sbjct: 629 VDRCLG-----------------------------------PDGYTYRLMVDGFCKTGNV 653
Query: 521 HKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLR 567
+ Y +EM+ GF P + ++ +I LC R + + +I ++
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 157/318 (49%), Gaps = 12/318 (3%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TYN L+ C++ + +EA L M E D TY +LI +C G A ++
Sbjct: 285 DVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIV 344
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+ + GF P TY +++ C + AL + + +G +PN+I +N L++G +
Sbjct: 345 GDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQ 404
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G + EA +L EM++KGL + +T+ L++ C G V A + M+ KG PD T+
Sbjct: 405 GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI Q + A ++ ML G+ PD TY L++ ++F M+
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
KG P+ T+N ++ LC + +EAL +L M ++PDAV++ T+I GF
Sbjct: 525 KGCAPNL--------FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 339 CRIRELGKAYKLKVEMDK 356
C+ +L AY L +M++
Sbjct: 577 CKNGDLDGAYTLFRKMEE 594
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 230/507 (45%), Gaps = 51/507 (10%)
Query: 56 RDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVA 111
R G+V+EA+ + M E +Y +++ + D G D+A+KV+ M D G +P V
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 112 TYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM 171
++ + ++C+ R AL +L + +G E N++++ +V GF + E EL +M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 172 NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTL 231
G++L T+ L+ + C KG V++ ++ +++ +G+LP+ TY I LC + L
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 232 SEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIST 291
A + ++ +G PD TY L+ ++F +A +M+++G PD
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD------- 320
Query: 292 SHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLK 351
TYN +I G C + A I+ G PD +Y ++I G C E +A L
Sbjct: 321 -SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 352 VEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYF 411
E K I + LY+ ++++GLS+ +G + +A L E++
Sbjct: 380 NEALGKGIKPNVI--LYN----TLIKGLSN-------------QGMILEAAQLANEMSEK 420
Query: 412 DYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKS 471
+P +++ +N L K +++A + IS P ++ LI
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG--YFPDIFTFNILIH--------- 469
Query: 472 VVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMV 531
G+ + M+ A D ML+ PD YN L+ C+ + Y MV
Sbjct: 470 ------GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 532 HYGFAPHMFSVLALIEALCCVRRYNKM 558
G AP++F+ L+E+LC RY K+
Sbjct: 524 EKGCAPNLFTFNILLESLC---RYRKL 547
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 192/456 (42%), Gaps = 63/456 (13%)
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK-GLALDDKTYTSLIHLFCNKGKV 196
E GF+ L ++ ++++ GK E EE+L +M + G + + Y + + KGKV
Sbjct: 33 EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKV 92
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
++A + M P +Y ++ L +A ++ M RG++PD ++T
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKG---------------------------FLPDFVTGI 289
M ++ ++ A L + M +G F +G+
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
S T+N ++ LC +E ++L + + G+ P+ +Y+ I G C+ EL A +
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 350 LK---VEMDKKS--ISWLGL-WGLYDD---------IDKSVMQGLSHED-TFSNLMSDYL 393
+ +E K I++ L +GL + + K V +GL + T++ L++ Y
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 394 AEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRM-P 452
G ++ A + + + ++P Y ++ L + E L F + + P
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG---ETNRALALFNEALGKGIKP 389
Query: 453 TFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIF 512
I+Y+TLI+ SN +G++ +AA+ + M E P+ +N+L+
Sbjct: 390 NVILYNTLIKGLSN---------------QGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 513 DHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
C+ G V A + M+ G+ P +F+ LI
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 223/481 (46%), Gaps = 48/481 (9%)
Query: 70 MAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREA 129
+ S+ + Y LI ++ +G + ++F M GF+PSV T NAI+ + +
Sbjct: 158 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217
Query: 130 LGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHL 189
L+ +++R P++ +FN L+ C +G E++ L+Q+M + G A TY +++H
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 190 FCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPD 249
+C KG+ + A E+ M KG+ D TY LI LC +++ + L ++M +R + P+
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 250 NKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRA 309
TY L++ + + + A L +EM+ G P+ HVT+NA+I G
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN--------HVTFNALIDGHISEGNF 389
Query: 310 EEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRE--LGKAYKLKVEMDKKSISWLGLWGL 367
+EAL++ M GL+P VSY ++ G C+ E L + + ++++ + + + G+
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449
Query: 368 YDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVL 427
D + K+ G L++A +L E++ P V YS +N
Sbjct: 450 IDGLCKN---------------------GFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
Query: 428 NKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKK 487
K R AK ++ I V L P IIY TLI NC G +K+
Sbjct: 489 CKVGRFKTAK-EIVCRIYRVGLS-PNGIIYSTLIYNCCR---------------MGCLKE 531
Query: 488 AARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIE 547
A R ++ M+ + D +N+L+ C+ G V +A + M G P+ S LI
Sbjct: 532 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Query: 548 A 548
Sbjct: 592 G 592
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/565 (24%), Positives = 248/565 (43%), Gaps = 48/565 (8%)
Query: 26 FAAAWTETEKTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTS 80
F AA + KG+ AD TYN L+ CR R+ + +LR M + +E TY +
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
LI+ F ++G+ A ++ EM+ G SP+ T+NA++ + + F+EAL + + +G
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
P+ +S+ L+ G C + + A M + G+ + TYT +I C G +++A
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
+ EM GI PD TY LI C A ++ + R GLSP+ Y+ L+
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
+A + + MI +G D H T+N ++ LC + EA E +R M
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRD--------HFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 321 EIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDK--------------KSISWLGLWG 366
G+ P+ VS+ +I G+ E KA+ + EM K K + G
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 367 LYDDIDKSVMQGLSHEDT--FSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFL 424
+ KS+ + DT ++ L++ G+L KA L E+ LP Y+ +
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 425 NVLNKK---------ARITEAKHHLLWF-ISHVCLRMPTF--------IIYDTLIENCSN 466
+ L +K A+ EA+ ++L + + C F I + ++N +
Sbjct: 696 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 755
Query: 467 N-EFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYD 525
+ + ++ G+ G ++K M N P+ YN+L+ + + +V ++
Sbjct: 756 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 815
Query: 526 MYMEMVHYGFAPHMFSVLALIEALC 550
+Y ++ G P + +L+ +C
Sbjct: 816 LYRSIILNGILPDKLTCHSLVLGIC 840
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 141/563 (25%), Positives = 235/563 (41%), Gaps = 81/563 (14%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D T+N LV + C+ G+V EA +R M + ++ LI+ + + G+ KA+ VF
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM G P+ TY +++ C+ REA L+ L + + +N L+ C
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE--------------------- 197
G + +A L EM Q+ + D TYTSLI C KGK
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 726
Query: 198 ---------KAFEMKA------EMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
KA + KA +M + G PD T +I + + DL EM
Sbjct: 727 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
+ P+ TY L+ Y + S +F L +I G LPD +T ++++ G
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD--------KLTCHSLVLG 838
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY-------KLKVEMD 355
+C + E L+IL+ G+ D +++ +I C E+ A+ L + +D
Sbjct: 839 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898
Query: 356 KKSI-SWLGLWGLYDDIDKSVM-------QGLSHED-TFSNLMSDYLAEGHLEKAYLLER 406
K + + + + +S M QG+S E + L++ G ++ A++++
Sbjct: 899 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 958
Query: 407 EINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSN 466
E+ P +V S + L K + EA LL F+ + L +PT + TL+ C
Sbjct: 959 EMIAHKICPPNVAESAMVRALAKCGKADEATL-LLRFMLKMKL-VPTIASFTTLMHLCCK 1016
Query: 467 NEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDM 526
N +++ +R +M K D YN+LI C G++ A+++
Sbjct: 1017 NG-----NVIEALELRVVMSNCG----------LKLDLVSYNVLITGLCAKGDMALAFEL 1061
Query: 527 YMEMVHYGFAPHMFSVLALIEAL 549
Y EM GF + + ALI L
Sbjct: 1062 YEEMKGDGFLANATTYKALIRGL 1084
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/547 (22%), Positives = 234/547 (42%), Gaps = 55/547 (10%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
Y+ L+ CCR G ++EA+ I M D T+ L+ C G+ +A + M
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
G P+ +++ ++ Y +A + + + G P ++ +L++G C G +
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
EAE+ L+ ++ A+D Y +L+ C G + KA + EMV + ILPD+ TY LI
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 223 GSLCLQQTLSEAFDLFQEMLRRG-LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
LC + A +E RG + P+ YT + Q+ + +++M + G
Sbjct: 696 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 755
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
PD VT NA+I G + + E+ ++L M P+ +Y+ ++ G+ +
Sbjct: 756 TPDIVT--------TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 807
Query: 342 RELGKAYKLKVEM-------DKKSISWLGLWGLYDD---------IDKSVMQGLSHED-T 384
+++ ++ L + DK + L L G+ + + + +G+ + T
Sbjct: 808 KDVSTSFLLYRSIILNGILPDKLTCHSLVL-GICESNMLEIGLKILKAFICRGVEVDRYT 866
Query: 385 FSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHL---- 440
F+ L+S A G + A+ L + + ++VLN+ R E++ L
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926
Query: 441 -----------LWFISHVCLRM----PTFIIYDTLIEN--CSNNEFKSVVGLVKGFGMRG 483
+ I+ +C R+ F++ + +I + C N +S +V+ G
Sbjct: 927 KQGISPESRKYIGLINGLC-RVGDIKTAFVVKEEMIAHKICPPNVAES--AMVRALAKCG 983
Query: 484 LMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVL 543
+A ML+ P A + L+ C+ GNV +A ++ + M + G + S
Sbjct: 984 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043
Query: 544 ALIEALC 550
LI LC
Sbjct: 1044 VLITGLC 1050
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 229/567 (40%), Gaps = 95/567 (16%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TY ++ C++G ++EA+ +L M+ + D TY++LI+ FC G+ A ++ +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G SP+ Y+ ++ CR +EA+ I +I G + +FN LV C GK+
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
EAEE ++ M G+ + ++ LI+ + N G+ KAF + EM G P TYG L
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
+ LC L EA + + + D Y L++A +KA L EM+ +
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL-------RG---------------- 318
LPD TY ++I GLC + + + IL RG
Sbjct: 685 LPD--------SYTYTSLISGLC--RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 734
Query: 319 ---------------MPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLG 363
M +G +PD V+ + +I G+ R+ ++ K L EM ++
Sbjct: 735 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN----- 789
Query: 364 LWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVH-YSV 422
G + T++ L+ Y + ++LL R I LP + +S+
Sbjct: 790 --------------GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835
Query: 423 FLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGM 481
L + K + V + TF + LI C+N E LVK
Sbjct: 836 VLGICESNMLEIGLKILKAFICRGVEVDRYTF---NMLISKCCANGEINWAFDLVKVMTS 892
Query: 482 RG--LMKKAARAHDRMLEGNYK-----------------PDGAVYNLLIFDHCRCGNVHK 522
G L K A +L N++ P+ Y LI CR G++
Sbjct: 893 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 523 AYDMYMEMVHYGFAPHMFSVLALIEAL 549
A+ + EM+ + P + A++ AL
Sbjct: 953 AFVVKEEMIAHKICPPNVAESAMVRAL 979
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 176/410 (42%), Gaps = 33/410 (8%)
Query: 13 RNRVPPPDVMIRGF------AAAWT-----ETEKTNWKGLADETTYNKLVLACCRDGRVE 61
R V P VM F A W + N D T N ++ R G++E
Sbjct: 717 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776
Query: 62 EALGILRGMAESDE----NTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIV 117
+ +L M + TY L+H + + ++ ++ +I G P T +++V
Sbjct: 777 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836
Query: 118 LAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLA 177
L C L IL+ I RG E + +FN L+ C G++ A +L++ M G++
Sbjct: 837 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 896
Query: 178 LDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDL 237
LD T +++ + + +++ + EM +GI P++ Y LI LC + AF +
Sbjct: 897 LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 956
Query: 238 FQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYN 297
+EM+ + P N + ++ A + +A L M+ +P + +
Sbjct: 957 KEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS--------FT 1008
Query: 298 AIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
++H C EALE+ M GL D VSY+ +I G C ++ A++L EM K
Sbjct: 1009 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM--K 1066
Query: 358 SISWLGLWGLYDDIDKSVMQG-LSHEDTFSN---LMSDYLAEGHLEKAYL 403
+L Y K++++G L+ E FS ++ D LA G + L
Sbjct: 1067 GDGFLANATTY----KALIRGLLARETAFSGADIILKDLLARGFITSMSL 1112
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 238/509 (46%), Gaps = 52/509 (10%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN ++ CR ++ AL IL M + T SL++ FC + +A + +M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
++ G+ P T+ +V + + EA+ ++ ++ +G +P+L+++ A++ G C +G+
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+ A LL +M + + D Y+++I C V+ A + EM +KGI PD TY L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I LC S+A L +ML R ++P+ T+ L+ A+ + + +A L DEMI +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
P+ VT YN++I+G C+ DR +EA +I M PD V+Y+T+I GFC+
Sbjct: 342 DPNIVT--------YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
+++ +L +M ++ GL G + T++ L+ + + A
Sbjct: 394 KKVVDGMELFRDMSRR-----GLVG--------------NTVTYTTLIHGFFQASDCDNA 434
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRM-PTFIIYDTL 460
++ +++ P + Y+ L+ L K ++ +A ++ F +M P Y+ +
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA---MVVFEYLQKSKMEPDIYTYNIM 491
Query: 461 IEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGN 519
E C + + L ++G+ KPD YN +I C+ G
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGV----------------KPDVIAYNTMISGFCKKGL 535
Query: 520 VHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
+AY ++++M G P + LI A
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 229/511 (44%), Gaps = 76/511 (14%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TY +I+ C + Q A + +M+ G+ PS+ T N+++ +C R EA+ ++ +
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK- 195
+E G++P+ ++F LV G K EA L++ M KG D TY ++I+ C +G+
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 196 ----------------------------------VEKAFEMKAEMVHKGILPDADTYGPL 221
V+ A + EM +KGI PD TY L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I LC S+A L +ML R ++P+ T+ L+ A+ + + +A L DEMI +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
P+ VTYN++I+G C+ DR +EA +I M PD V+Y+T+I GFC+
Sbjct: 342 DPNI--------VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 342 RELGKAYKLKVEMDKK-----SISWLGLW-GLYDDID--------KSVMQGLSHED--TF 385
+++ +L +M ++ ++++ L G + D K ++ H + T+
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 386 SNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFIS 445
+ L+ G LEKA ++ + P Y++ + K ++ E L +S
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV-EDGWDLFCSLS 512
Query: 446 HVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGA 505
++ P I Y+T+I GF +GL ++A +M E PD
Sbjct: 513 LKGVK-PDVIAYNTMIS---------------GFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 506 VYNLLIFDHCRCGNVHKAYDMYMEMVHYGFA 536
YN LI H R G+ + ++ EM FA
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMRSCRFA 587
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 194/409 (47%), Gaps = 50/409 (12%)
Query: 43 DETTYNKLVLACCRDGRVEEALGIL----RGMAESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY ++ C+ G + AL +L +G E+D Y+++I C D A +F
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM + G P V TY++++ C R+ +A +L ++ER PN+++FN+L+ F +
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+ EAE+L EM Q+ + + TY SLI+ FC ++++A ++ MV K LPD TY
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C + + + +LF++M RRGL + TYT L+ + + A + +M+
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 279 KGFLPDFVT---------------------------GISTSHVTYNAIIHGLCLLDRAEE 311
G P+ +T + TYN + G+C + E+
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYD-- 369
++ + G+ PD ++Y+T+I GFC+ +AY L ++M K L G Y+
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM--KEDGPLPDSGTYNTL 561
Query: 370 ------DIDKSVMQGLSHE---------DTFSNLMSDYLAEGHLEKAYL 403
D DK+ L E + L++D L +G L+K +L
Sbjct: 562 IRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFL 610
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 205/483 (42%), Gaps = 41/483 (8%)
Query: 125 RFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYT 184
+ EA+ + +++ P+++ F+ L+ K + ++M G++ + TY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 185 SLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRR 244
+I+ C + ++ A + +M+ G P T L+ C +SEA L +M+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 245 GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLC 304
G PD T+T L+ + S+A L + M+ KG PD VT Y A+I+GLC
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT--------YGAVINGLC 216
Query: 305 LLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI----- 359
+ AL +L M + + D V YSTVI C+ R + A L EMD K I
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 360 ------SWLGLWGLYDDIDKSVMQGLSHED-----TFSNLMSDYLAEGHLEKAYLLEREI 408
S L +G + D + + L + TF++L+ + EG L +A L E+
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 409 NYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNE 468
P V Y+ +N R+ EA+ +S CL P + Y+TLI N
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL--PDVVTYNTLI-----NG 389
Query: 469 FKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYM 528
F +V G L + +R R L GN Y LI + + A ++
Sbjct: 390 FCKAKKVVDGME---LFRDMSR---RGLVGN----TVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 529 EMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLNEIDVREG 588
+MV G P++ + L++ LC + K V + +S D +++E + G
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 589 QTE 591
+ E
Sbjct: 500 KVE 502
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 5/234 (2%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYK 96
L D TYN L+ C+ +V + + + R M+ + TYT+LIH F CD A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
VF +M+ G P++ TYN ++ C++ + +A+ + L + EP++ ++N + +G C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
GK+E+ +L ++ KG+ D Y ++I FC KG E+A+ + +M G LPD+
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAF 270
TY LI + + + +L +EM + D TY GL++ + K F
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKGF 609
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/554 (25%), Positives = 254/554 (45%), Gaps = 60/554 (10%)
Query: 5 RVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADET-TYNKLVLACCRDGRVEEA 63
R L F N++ ++ F + EK G++ TYN L+ CR ++ A
Sbjct: 5 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 64
Query: 64 LGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLA 119
L +L M E T +SL++ +C + A + +M++ G+ P T+ ++
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 120 YCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD 179
+ EA+ ++ +++RG +PNL+++ +V G C +G ++ A LL +M + D
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQ 239
+ ++I C V+ A + EM KGI P+ TY LI LC S+A L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
+M+ + ++P+ T+ L+ A+ + +F +A L D+MI + PD TYN++
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI--------FTYNSL 296
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
I+G C+ DR ++A ++ M PD +Y+T+I GFC+ + + +L EM
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM----- 351
Query: 360 SWLGLWGLYDDID-KSVMQGLSH-------EDTFSNLMSDYLAEGHLEKAYL-------- 403
S GL G D + +++QGL H + F ++SD + + + L
Sbjct: 352 SHRGLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 404 -LEREINYFDYL-----PVDVH-YSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFII 456
LE+ + FDY+ +D++ Y+ + + K ++ + L +S ++ P +
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG-WDLFCSLSLKGVK-PNVVT 467
Query: 457 YDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCR 516
Y+T+I G + L+++A +M E PD YN LI H R
Sbjct: 468 YNTMIS---------------GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Query: 517 CGNVHKAYDMYMEM 530
G+ + ++ EM
Sbjct: 513 DGDKAASAELIREM 526
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 225/512 (43%), Gaps = 44/512 (8%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TY LI+ FC + Q A + +M+ G+ PS+ T ++++ YC KR +A+ ++ +
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+E G+ P+ I+F L+ G K EA L+ M Q+G + TY +++ C +G +
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+ AF + +M I D + +I SLC + + +A +LF+EM +G+ P+ TY+ L
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
+S ++S A L +MI K P+ VT+NA+I + EA ++
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNL--------VTFNALIDAFVKEGKFVEAEKLH 278
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVM 376
M + + PD +Y+++I GFC L KA K+ ++ + D+
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKA--------KQMFEFMVSKDCFPDL----- 325
Query: 377 QGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
DT++ L+ + +E L RE+++ + V Y+ + L A
Sbjct: 326 ------DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 437 KHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRML 496
+ +S P + Y L++ NN G ++KA D M
Sbjct: 380 QKVFKQMVSDGV--PPDIMTYSILLDGLCNN---------------GKLEKALEVFDYMQ 422
Query: 497 EGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYN 556
+ K D +Y +I C+ G V +D++ + G P++ + +I LC R
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 557 KMSWVIQNTLRSCNLNDSELLQVLNEIDVREG 588
+ +++ L DS L +R+G
Sbjct: 483 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 39/282 (13%)
Query: 45 TTYNKLVLACCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
T+N L+ A ++G+ EA + ++ + D TY SLI+ FC + DKA ++F
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKR-------FRE------------------------- 128
M+ P + TYN ++ +C+ KR FRE
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 129 ---ALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTS 185
A + + ++ G P++++++ L+ G C GK+E+A E+ M + + LD YT+
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 186 LIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
+I C GKV+ +++ + KG+ P+ TY +I LC ++ L EA+ L ++M G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
PD+ TY L+ A+ + + L EM F+ D T
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 537
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D TYN L+ C+ RVE+ + R M+ D TYT+LI G CD A KVF
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL---------------RCLIE----- 138
+M+ G P + TY+ ++ C + + +AL + +IE
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 139 ---------------RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTY 183
+G +PN++++N ++ G C K ++EA LL++M + G D TY
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAF 235
+LI G + E+ EM + DA T G L+ ++ L ++F
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSF 554
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 162/392 (41%), Gaps = 70/392 (17%)
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQ 265
MV LP + L+ ++ + L ++M R G+S + TY L++ + ++Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 266 FSKAFHLQDEMIHKGFLPDFVT---------------------------GISTSHVTYNA 298
S A L +M+ G+ P VT G +T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 299 IIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS 358
+IHGL L ++A EA+ ++ M + G P+ V+Y V+ G C+ ++ A+ L +M+
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 359 I--------SWLGLWGLYDDIDKSV-------MQGL-SHEDTFSNLMSDYLAEGHLEKAY 402
I + + Y +D ++ +G+ + T+S+L+S + G A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 403 -----LLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIY 457
++E++IN P V ++ ++ K+ + EA+ ++
Sbjct: 241 QLLSDMIEKKIN-----PNLVTFNALIDAFVKEGKFVEAEK-----------------LH 278
Query: 458 DTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRC 517
D +I+ + + + L+ GF M + KA + + M+ + PD YN LI C+
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 518 GNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
V +++ EM H G + LI+ L
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 225/506 (44%), Gaps = 66/506 (13%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TY+ LI+ FC + Q A V +M+ G+ P++ T ++++ YC KR EA+ ++ +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
G++PN ++FN L+ G K EA L+ M KG D TY +++ C +G
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+ AF + +M + P Y +I LC + + +A +LF+EM +G+ P+ TY+ L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT---------------------------GI 289
+S ++S A L +MI + PD T I
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
S VTY+++I+G C+ DR +EA ++ M PD V+Y+T+I GFC+ + + + +
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 350 LKVEMDKKSISW------LGLWGLYDDIDKSVMQGLSHE----------DTFSNLMSDYL 393
+ EM ++ + + + GL+ D + Q + E T++ L+
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 394 AEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLW-FISHVCLR-- 450
G LEKA ++ + P Y++ + + K ++ + W ++ L+
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG-----WDLFCNLSLKGV 532
Query: 451 MPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLL 510
P + Y+T+I GF +G ++A M E P+ YN L
Sbjct: 533 KPDVVAYNTMIS---------------GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Query: 511 IFDHCRCGNVHKAYDMYMEMVHYGFA 536
I R G+ + ++ EM GFA
Sbjct: 578 IRARLRDGDREASAELIKEMRSCGFA 603
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 188/409 (45%), Gaps = 50/409 (12%)
Query: 43 DETTYNKLVLACCRDGRVEEALGIL----RGMAESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY +V C+ G + A +L +G E Y ++I C D A +F
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM G P+V TY++++ C R+ +A +L +IER P++ +F+AL+ F +
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+ EAE+L EM ++ + TY+SLI+ FC ++++A +M MV K PD TY
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C + + E ++F+EM +RGL + TY L+ A + EM+
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 279 KGFLPDFVT---------------------------GISTSHVTYNAIIHGLCLLDRAEE 311
G P+ +T + + TYN +I G+C + E+
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDI 371
++ + G+ PD V+Y+T+I GFCR +A L EM K L G Y+ +
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM--KEDGTLPNSGCYNTL 577
Query: 372 DKSVMQ-----------------GLSHEDTFSNLMSDYLAEGHLEKAYL 403
++ ++ G + + + L+++ L +G L+K++L
Sbjct: 578 IRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFL 626
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 153/309 (49%), Gaps = 12/309 (3%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
+ T+N L+ + EA+ ++ M + D TY +++ C +G D A+ +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+M P V YN I+ C+ K +AL + + + +G PN++++++L+ C
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G+ +A LL +M ++ + D T+++LI F +GK+ +A ++ EMV + I P TY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C+ L EA +F+ M+ + PD TY L+ + + + + EM
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
+G + + VTYN +I GL + A EI + M G+ P+ ++Y+T++ G
Sbjct: 425 RGLVGN--------TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 339 CRIRELGKA 347
C+ +L KA
Sbjct: 477 CKNGKLEKA 485
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 165/395 (41%), Gaps = 44/395 (11%)
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
K+++A L EM + ++ L+ K + + +M + GI + TY
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
LI C + L A + +M++ G P+ T + L++ Y + S+A L D+M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM--- 177
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
FVTG + VT+N +IHGL L ++A EA+ ++ M G PD V+Y V+ G C
Sbjct: 178 -----FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 340 RIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLE 399
+ + A+ L +M++ + L I +++ GL H++
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVL------IYNTIIDGLCKYK-------------HMD 273
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
A L +E+ P V YS ++ L R ++A L
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL-----------------SD 316
Query: 460 LIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGN 519
+IE N + + L+ F G + +A + +D M++ + P Y+ LI C
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 520 VHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRR 554
+ +A M+ MV P + + LI+ C +R
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 230/501 (45%), Gaps = 54/501 (10%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D T + L+ C R+ +A+ ++ M E D T+T+LIH + +A +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+M+ G P + TY +V C+ AL +L+ + + E +++ +N ++ G C
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
M++A L EM+ KG+ D TY+SLI CN G+ A + ++M+ + I P+ T+
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 331
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI + + L EA L+ EM++R + PD TY+ L++ + + + +A H+ + MI
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 391
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
K P+ VTY+ +I G C R EE +E+ R M + GL + V+Y+T+I GF
Sbjct: 392 KDCFPNV--------VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHL 398
+ R+ A +M K + +G + +++ T++ L+ G L
Sbjct: 444 FQARDCDNA-----QMVFKQMVSVG-------VHPNIL-------TYNILLDGLCKNGKL 484
Query: 399 EKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLW-FISHVCLR--MPTFI 455
KA ++ + P Y++ + + K ++ + W ++ L+ P I
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG-----WELFCNLSLKGVSPNVI 539
Query: 456 IYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHC 515
Y+T+I GF +G ++A +M E P+ YN LI
Sbjct: 540 AYNTMIS---------------GFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Query: 516 RCGNVHKAYDMYMEMVHYGFA 536
R G+ + ++ EM GFA
Sbjct: 585 RDGDREASAELIKEMRSCGFA 605
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 193/444 (43%), Gaps = 46/444 (10%)
Query: 143 PNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEM 202
P+++ FN L+ K E L ++M G++ D TY+ I+ FC + ++ A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 203 KAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRL 262
A+M+ G PD T L+ C + +S+A L +M+ G PD T+T L+ L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 263 QAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEI 322
+ S+A L D+M+ +G PD VTY +++GLC + AL +L+ M +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDL--------VTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 323 GLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS-----------ISWLGLWGLYDDI 371
+ D V Y+T+I G C+ + + A L EMD K IS L +G + D
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 372 DKSVMQGLSHE-----DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNV 426
+ + + + TFS L+ ++ EG L +A L E+ P YS +N
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 427 LNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLM 485
R+ EAKH IS C P + Y TLI+ C + + L + RGL+
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCF--PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 486 -------------------KKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDM 526
A +M+ P+ YN+L+ C+ G + KA +
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 527 YMEMVHYGFAPHMFSVLALIEALC 550
+ + P +++ +IE +C
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMC 514
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 5/230 (2%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAE 100
TY+ L+ C+ RVEE + + R M++ + TYT+LIH F CD A VF +
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M+ G P++ TYN ++ C++ + +A+ + L EP++ ++N +++G C GK
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+E+ EL ++ KG++ + Y ++I FC KG E+A + +M G LP++ TY
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAF 270
LI + + +L +EM G + D T GL++ + K+F
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 627
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 39/282 (13%)
Query: 45 TTYNKLVLACCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
T++ L+ A ++G++ EA + ++ + D TY+SLI+ FC + D+A +F
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGF------------------- 141
MI P+V TY+ ++ +C+ KR E + + R + +RG
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 142 ----------------EPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTS 185
PN++++N L+ G C GK+ +A + + + + + D TY
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 186 LIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
+I C GKVE +E+ + KG+ P+ Y +I C + + EA L ++M G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
P++ TY L+ A + L EM GF D T
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 227/484 (46%), Gaps = 59/484 (12%)
Query: 58 GRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIV 117
G+ E LGI +D T+ +I+ FC Q A + +M+ G+ P T ++V
Sbjct: 108 GKKMEVLGI-----RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLV 162
Query: 118 LAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLA 177
+CR R +A+ ++ ++E G++P+++++NA++ C ++ +A + +E+ +KG+
Sbjct: 163 NGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR 222
Query: 178 LDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDL 237
+ TYT+L++ CN + A + ++M+ K I P+ TY L+ + + EA +L
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Query: 238 FQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYN 297
F+EM+R + PD TY+ L++ L + +A + D M+ KG L D V+YN
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV--------VSYN 334
Query: 298 AIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
+I+G C R E+ +++ R M + GL + V+Y+T+I GF + ++ KA + +MD
Sbjct: 335 TLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD-- 392
Query: 358 SISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVD 417
+G+ DI T++ L+ G LEKA ++ ++ +
Sbjct: 393 ------FFGISPDI-----------WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435
Query: 418 VHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLV 476
V Y+ + + K ++ EA L +S L+ P + Y T++ C+ V L
Sbjct: 436 VTYTTVIRGMCKTGKVEEA-WSLFCSLSLKGLK-PDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 477 KGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFA 536
GLMK D G++ + ++ +M+ G+A
Sbjct: 494 TKMKQEGLMKNDCTLSD------------------------GDITLSAELIKKMLSCGYA 529
Query: 537 PHMF 540
P +
Sbjct: 530 PSLL 533
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 203/429 (47%), Gaps = 32/429 (7%)
Query: 14 NRVPPPDVMIRGFAAAWTETEKTNWKGLADET-TYNKLVLACCRDGRVEEALGILRGMA- 71
NR+ V ++ + + +K G+ ++ T+N ++ C +V AL IL M
Sbjct: 89 NRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK 148
Query: 72 ---ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFRE 128
E D T SL++ FC + + A + +M++ G+ P + YNAI+ + C+ KR +
Sbjct: 149 LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 208
Query: 129 ALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
A + + +G PN++++ ALV G C + +A LL +M +K + + TY++L+
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 189 LFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
F GKV +A E+ EMV I PD TY LI LCL + EA +F M+ +G
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDR 308
D +Y L++ F KA ++D M K F G+ ++ VTYN +I G
Sbjct: 329 DVVSYNTLING------FCKAKRVEDGM--KLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 309 AEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLY 368
++A E M G+SPD +Y+ ++ G C EL KA + +M K+ +
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM--------- 431
Query: 369 DDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLN 428
D+D T++ ++ G +E+A+ L ++ P V Y+ ++ L
Sbjct: 432 -DLDIV---------TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 429 KKARITEAK 437
K + E +
Sbjct: 482 TKGLLHEVE 490
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 212/476 (44%), Gaps = 67/476 (14%)
Query: 92 DKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
+ A +F++M+ + PS+ +N ++ A + K++ + + + + G +L +FN +
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
+ FC ++ A +L +M + G D T SL++ FC + +V A + +MV G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
PD Y +I SLC + +++AFD F+E+ R+G+ P+ TYT L++ +++S A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 272 LQDEMIHKGFLPDFVT---------------------------GISTSHVTYNAIIHGLC 304
L +MI K P+ +T I VTY+++I+GLC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 305 LLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGL 364
L DR +EA ++ M G D VSY+T+I GFC+ + + KL EM ++ +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL----- 361
Query: 365 WGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFL 424
+S+ T++ L+ + G ++KA ++++F P Y++ L
Sbjct: 362 --------------VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 425 NVLNKKARITEAKHHLLWFISHVCLRMPTFII-YDTLIEN-CSNNEFKSVVGLVKGFGMR 482
L + +A L+ F M I+ Y T+I C + + L ++
Sbjct: 408 GGLCDNGELEKA---LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 483 GLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPH 538
GL KPD Y ++ C G +H+ +Y +M G +
Sbjct: 465 GL----------------KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 12/212 (5%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYK 96
LAD +YN L+ C+ RVE+ + + R M++ S+ TY +LI F G DKA +
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
F++M G SP + TYN ++ C + +AL I + +R + +++++ +++G C
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
GK+EEA L ++ KGL D TYT+++ C KG + + + +M +G++ +
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
T G + L +L ++ML G +P
Sbjct: 507 TLSD--GDITLSA------ELIKKMLSCGYAP 530
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%)
Query: 471 SVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEM 530
++ LV GF R + A D+M+E YKPD YN +I C+ V+ A+D + E+
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 531 VHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLR 567
G P++ + AL+ LC R++ + ++ + ++
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 239/512 (46%), Gaps = 59/512 (11%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN L+ CR ++ AL +L M E T +SL++ +C + A + +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
++ G+ P T+ ++ + EA+ ++ +++RG +PNL+++ +V G C +G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+ A LL +M + D + ++I C V+ A + EM KGI P+ TY L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I LC S+A L +M+ + ++P+ T+ L+ A+ + +F +A L D+MI +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
PD TYN++++G C+ DR ++A ++ M PD V+Y+T+I GFC+
Sbjct: 362 DPDI--------FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDID-KSVMQGLSH-------EDTFSNLMSDYL 393
+ + +L EM + GL G D + +++QGL H + F ++SD +
Sbjct: 414 KRVEDGTELFREMSHR-----GLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 394 AEGHLEKAYL---------LEREINYFDYL-----PVDVH-YSVFLNVLNKKARITEAKH 438
+ + L LE+ + FDY+ +D++ Y+ + + K ++ +
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG-W 525
Query: 439 HLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEG 498
L +S ++ P + Y+T+I G + L+++A +M E
Sbjct: 526 DLFCSLSLKGVK-PNVVTYNTMIS---------------GLCSKRLLQEAYALLKKMKED 569
Query: 499 NYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEM 530
P+ YN LI H R G+ + ++ EM
Sbjct: 570 GPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 189/450 (42%), Gaps = 54/450 (12%)
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
FS Y I+ D + +A+G+ +++ P+++ FN L+ K +
Sbjct: 45 AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV 104
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
L ++M + + TY LI+ FC + ++ A + +M+ G P T L+
Sbjct: 105 ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
C + +S+A L +M+ G PD T+T L+ L + S+A L D M+ +G P+
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL 344
VTY +++GLC + AL +L M + D V ++T+I C+ R +
Sbjct: 225 L--------VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 345 GKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAY-- 402
A L EM+ K I + T+S+L+S + G A
Sbjct: 277 DDALNLFKEMETKGIR-------------------PNVVTYSSLISCLCSYGRWSDASQL 317
Query: 403 ---LLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
++E++IN P V ++ ++ K+ + EA+ +YD
Sbjct: 318 LSDMIEKKIN-----PNLVTFNALIDAFVKEGKFVEAEK-----------------LYDD 355
Query: 460 LIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGN 519
+I+ + + + LV GF M + KA + + M+ + PD YN LI C+
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 520 VHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
V +++ EM H G + LI+ L
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 39/282 (13%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
T+N L+ A ++G+ EA + M + D TY SL++ FC + DKA ++F
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKR-------FRE------------------------- 128
M+ P V TYN ++ +C+ KR FRE
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 129 ---ALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTS 185
A + + ++ G P++++++ L+ G C GK+E+A E+ M + + LD YT+
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 186 LIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
+I C GKV+ +++ + KG+ P+ TY +I LC ++ L EA+ L ++M G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
P++ TY L+ A+ + + L EM F+ D T
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D TYN L+ C+ RVE+ + R M+ D TYT+LI G CD A KVF
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL---------------RCLIE----- 138
+M+ G P + TY+ ++ C + + +AL + +IE
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 139 ---------------RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTY 183
+G +PN++++N ++ G C K ++EA LL++M + G + TY
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAF 235
+LI G + E+ EM + DA T G L+ ++ L ++F
Sbjct: 579 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSF 629
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 195/407 (47%), Gaps = 46/407 (11%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
+E TY ++ C+ G+ A+ +LR M E D Y+ +I C G D A+ +F
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM GF + TYN ++ +C R+ + +LR +I+R PN+++F+ L+ F +
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE 346
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+ EA++LL+EM Q+G+A + TY SLI FC + ++E+A +M M+ KG PD T+
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C + + +LF+EM RG+ + TY L+ + + A L EM+
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 279 KGFLPDFVT----------------------GISTSHV-----TYNAIIHGLCLLDRAEE 311
+ PD V+ I S + Y IIHG+C + ++
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM-------DKKSISWLGL 364
A ++ +P G+ DA +Y+ +I CR L KA L +M D+ + + L
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 365 WGLYDD--------IDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYL 403
L DD I++ G + + ++ + L+ G L+K++L
Sbjct: 587 AHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFL 633
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/521 (25%), Positives = 237/521 (45%), Gaps = 68/521 (13%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVF 98
D +N L+ C + RV EAL ++ M E T +L++ C G+ A +
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M++TGF P+ TY ++ C+ + A+ +LR + ER + + + ++ ++ G C
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G ++ A L EM KG D TY +LI FCN G+ + ++ +M+ + I P+ T+
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI S + L EA L +EM++RG++P+ TY L+ + + + +A + D MI
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
KG PD +T+N +I+G C +R ++ LE+ R M G+ + V+Y+T++ GF
Sbjct: 397 KGCDPDI--------MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLWGLYDDID--KSVMQGLSHEDTFSNLMSDYLAEG 396
C+ +L A KL EM + + DI K ++ GL + + G
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVR--------PDIVSYKILLDGLCDNGELEKALEIF---G 497
Query: 397 HLEKAYLLEREINYFDYL--------PVDVHYSVFLNVLNKKARITEAKHHLLWFISHVC 448
+EK+ +E +I + + VD + +F ++ K ++ ++++ IS +C
Sbjct: 498 KIEKSK-MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM--ISELC 554
Query: 449 LRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYN 508
+ D+L KA +M E + PD YN
Sbjct: 555 RK-------DSL-------------------------SKADILFRKMTEEGHAPDELTYN 582
Query: 509 LLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+LI H + A ++ EM GF + +V +I L
Sbjct: 583 ILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/557 (22%), Positives = 251/557 (45%), Gaps = 59/557 (10%)
Query: 7 LFKTFLRNRVPPPDVMIRGFAAAWTETEK----------TNWKGLADETTYNKLVLAC-C 55
LF+ +++R P + +A +T++ KG+A +++ C C
Sbjct: 75 LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134
Query: 56 RDGRVEEALG----ILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVA 111
R ++ A I++ E D + +L++ C + + +A ++ M++ G P++
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 112 TYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM 171
T N +V C + + +A+ ++ ++E GF+PN +++ ++ C G+ A ELL++M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 172 NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTL 231
++ + LD Y+ +I C G ++ AF + EM KG D TY LIG C
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 232 SEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIST 291
+ L ++M++R +SP+ T++ L+ ++ + + +A L EM+ +G P+
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN------- 367
Query: 292 SHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLK 351
+TYN++I G C +R EEA++++ M G PD ++++ +I G+C+ + +L
Sbjct: 368 -TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 352 VEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYF 411
EM + + +++ T++ L+ + G LE A L +E+
Sbjct: 427 REMSLRGV-------------------IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 412 DYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKS 471
P V Y + L+ L + +A + I + + I + C+ ++
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELEKA-LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 472 VVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMV 531
L ++G+ K D YN++I + CR ++ KA ++ +M
Sbjct: 527 AWDLFCSLPLKGV----------------KLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 532 HYGFAPHMFSVLALIEA 548
G AP + LI A
Sbjct: 571 EEGHAPDELTYNILIRA 587
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 192/443 (43%), Gaps = 49/443 (11%)
Query: 128 EALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
+A+ + R +I+ P +I FN L + E L ++M KG+A T + +I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 188 HLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
+ FC K+ AF +++ G PD + L+ LCL+ +SEA +L M+ G
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 248 PDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLD 307
P T L++ L + S A L D M+ GF P+ VTY +++ +C
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN--------EVTYGPVLNVMCKSG 242
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS-----ISWL 362
+ A+E+LR M E + DAV YS +I G C+ L A+ L EM+ K I++
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 363 GLWG--------------LYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREI 408
L G L D I + + + TFS L+ ++ EG L +A L +E+
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV---TFSVLIDSFVKEGKLREADQLLKEM 359
Query: 409 NYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNN 467
P + Y+ ++ K+ R+ EA + IS C P + ++ LI C N
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC--DPDIMTFNILINGYCKAN 417
Query: 468 EFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMY 527
+ L + +RG++ + YN L+ C+ G + A ++
Sbjct: 418 RIDDGLELFREMSLRGVI----------------ANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 528 MEMVHYGFAPHMFSVLALIEALC 550
EMV P + S L++ LC
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLC 484
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 153/312 (49%), Gaps = 15/312 (4%)
Query: 2 KLLRVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNW------KGLADET-TYNKLVLAC 54
KLLR + K + V V+I F E +G+A T TYN L+
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 55 CRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSV 110
C++ R+EEA+ ++ M + D T+ LI+ +C + D ++F EM G +
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 111 ATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQE 170
TYN +V +C+ + A + + ++ R P+++S+ L+ G C G++E+A E+ +
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 171 MNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQT 230
+ + + LD Y +IH CN KV+ A+++ + KG+ DA Y +I LC + +
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 231 LSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIS 290
LS+A LF++M G +PD TY L+ A+ + A L +EM GF D +S
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPAD----VS 614
Query: 291 TSHVTYNAIIHG 302
T + N + G
Sbjct: 615 TVKMVINMLSSG 626
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 222/512 (43%), Gaps = 45/512 (8%)
Query: 59 RVEEALGILRGMAESDE-NTYTSLIHLFCDQGQCDKAYKVFA---EMIDTGFSPSVATYN 114
+ ++A+ + R M +S T LF + + V A +M G + S+ T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 115 AIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK 174
++ +CR ++ A + +++ G+EP+ + FN L+ G C + ++ EA EL+ M +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEA 234
G T +L++ C GKV A + MV G P+ TYGP++ +C + A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 235 FDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHV 294
+L ++M R + D Y+ ++ AF+L +EM KGF D +T
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT------- 300
Query: 295 TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
YN +I G C R ++ ++LR M + +SP+ V++S +I F + +L +A +L EM
Sbjct: 301 -YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 355 DKKSIS--WLGLWGLYDD-------------IDKSVMQGLSHED-TFSNLMSDYLAEGHL 398
++ I+ + L D +D + +G + TF+ L++ Y +
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 399 EKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYD 458
+ L RE++ + V Y+ + + ++ AK +S P + Y
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV--RPDIVSYK 477
Query: 459 TLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCG 518
L++ +N G ++KA ++ + + D +Y ++I C
Sbjct: 478 ILLDGLCDN---------------GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 519 NVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
V A+D++ + G + +I LC
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 214/483 (44%), Gaps = 48/483 (9%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
YN L+ + G + +A+ I M +TY +LI +C GQ D A ++ EM
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ GF+ + ++ +++ C F AL + ++ R P L+ G C GK
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+A EL + KG +D +T +L+H C GK+++AF ++ E++ +G + D +Y L
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I C ++ L EAF EM++RGL PDN TY+ L+ + +A D+ G
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
LPD TY+ +I G C +R EE E M + P+ V Y+ +I +CR
Sbjct: 607 LPDV--------YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
L A +L+ +M K IS + T+++L+ +E+A
Sbjct: 659 GRLSMALELREDMKHKGIS-------------------PNSATYTSLIKGMSIISRVEEA 699
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLI 461
LL E+ P HY+ ++ K ++ + + CL + +
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE----------CL------LREMHS 743
Query: 462 ENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVH 521
+N N+ V ++ G+ G + +A+R + M E PD Y I+ + + G V
Sbjct: 744 KNVHPNKITYTV-MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVL 802
Query: 522 KAY 524
+A+
Sbjct: 803 EAF 805
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 229/516 (44%), Gaps = 51/516 (9%)
Query: 39 KGLA-DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDK 93
KG++ D + + A C+ G+VEEA+ + M E+ + T+ ++I G+ D+
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A+ +M++ G P++ TY+ +V R KR +A +L+ + ++GF PN+I +N L+
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
F G + +A E+ M KGL+L TY +LI +C G+ + A + EM+ G
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
+ ++ +I LC A EML R +SP T L+S + SKA L
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
+ ++KGF+ D T NA++HGLC + +EA I + + G D VSY+T
Sbjct: 494 FQFLNKGFVVDTRTS--------NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 334 VIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED-TFSNLMSDY 392
+I G C ++L +A+ +D+ V +GL ++ T+S L+
Sbjct: 546 LISGCCGKKKLDEAFMF--------------------LDEMVKRGLKPDNYTYSILICGL 585
Query: 393 LAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMP 452
+E+A + LP YSV ++ K R E + +S P
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV--QP 643
Query: 453 TFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIF 512
++Y+ LI + + G + A + M P+ A Y LI
Sbjct: 644 NTVVYNHLI---------------RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 513 DHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
V +A ++ EM G P++F ALI+
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 233/520 (44%), Gaps = 48/520 (9%)
Query: 39 KGL-ADETTYNKLVLACCRDGRVE---EALGILRGMAESDENTYTSLIHLFCDQGQCDKA 94
KG+ +TT N L+ + R + EA ++ D +T+ I+ FC G+ ++A
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
K+F++M + G +P+V T+N ++ R+ EA ++ERG EP LI+++ LV+G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
++ +A +L+EM +KG + Y +LI F G + KA E+K MV KG+
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
+ TY LI C A L +EML G + + ++T ++ F A
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
EM+ + P G+ T+ +I GLC + +ALE+ G D + + +
Sbjct: 460 EMLLRNMSPG--GGLLTT------LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 335 IFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLA 394
+ G C +L +A++++ E+ LG + D + +++ L+S
Sbjct: 512 LHGLCEAGKLDEAFRIQKEI-------LGRGCVMDRV------------SYNTLISGCCG 552
Query: 395 EGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTF 454
+ L++A++ E+ P + YS+ + L ++ EA W +P
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ--FWDDCKRNGMLPDV 610
Query: 455 IIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDH 514
Y +I+ C E ++ D M+ N +P+ VYN LI +
Sbjct: 611 YTYSVMIDGCCKAE---------------RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 515 CRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRR 554
CR G + A ++ +M H G +P+ + +LI+ + + R
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 12/313 (3%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYK 96
+ D T N L+ C G+++EA I + + D +Y +LI C + + D+A+
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
EM+ G P TY+ ++ + EA+ G P++ +++ ++ G C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+ EE +E EM K + + Y LI +C G++ A E++ +M HKGI P++
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
TY LI + + + EA LF+EM GL P+ YT L+ Y Q K L EM
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
K P+ +TY +I G EA +L M E G+ PD+++Y I+
Sbjct: 742 HSKNVHPN--------KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 337 GFCRIRELGKAYK 349
G+ + + +A+K
Sbjct: 794 GYLKQGGVLEAFK 806
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 4/237 (1%)
Query: 43 DETTYNKLVLACCRDGRVEEALGIL----RGMAESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY+ L+ +VEEA+ R D TY+ +I C + ++ + F
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM+ P+ YN ++ AYCR R AL + + +G PN ++ +L++G
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
++EEA+ L +EM +GL + YT+LI + G++ K + EM K + P+ TY
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
+IG ++EA L EM +G+ PD+ TY + Y Q +AF DE
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 4/174 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
+ YN L+ A CR GR+ AL + M + TYTSLI + ++A +F
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM G P+V Y A++ Y + + + +LR + + PN I++ ++ G+
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL 212
G + EA LL EM +KG+ D TY I+ + +G V +AF+ E + I+
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAII 817
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 214/483 (44%), Gaps = 48/483 (9%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
YN L+ + G + +A+ I M +TY +LI +C GQ D A ++ EM
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ GF+ + ++ +++ C F AL + ++ R P L+ G C GK
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+A EL + KG +D +T +L+H C GK+++AF ++ E++ +G + D +Y L
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I C ++ L EAF EM++RGL PDN TY+ L+ + +A D+ G
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
LPD TY+ +I G C +R EE E M + P+ V Y+ +I +CR
Sbjct: 607 LPDV--------YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
L A +L+ +M K IS + T+++L+ +E+A
Sbjct: 659 GRLSMALELREDMKHKGIS-------------------PNSATYTSLIKGMSIISRVEEA 699
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLI 461
LL E+ P HY+ ++ K ++ + + CL + +
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE----------CL------LREMHS 743
Query: 462 ENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVH 521
+N N+ V ++ G+ G + +A+R + M E PD Y I+ + + G V
Sbjct: 744 KNVHPNKITYTV-MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVL 802
Query: 522 KAY 524
+A+
Sbjct: 803 EAF 805
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 229/516 (44%), Gaps = 51/516 (9%)
Query: 39 KGLA-DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDK 93
KG++ D + + A C+ G+VEEA+ + M E+ + T+ ++I G+ D+
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A+ +M++ G P++ TY+ +V R KR +A +L+ + ++GF PN+I +N L+
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
F G + +A E+ M KGL+L TY +LI +C G+ + A + EM+ G
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
+ ++ +I LC A EML R +SP T L+S + SKA L
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
+ ++KGF+ D T NA++HGLC + +EA I + + G D VSY+T
Sbjct: 494 FQFLNKGFVVDTRTS--------NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 334 VIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED-TFSNLMSDY 392
+I G C ++L +A+ +D+ V +GL ++ T+S L+
Sbjct: 546 LISGCCGKKKLDEAFMF--------------------LDEMVKRGLKPDNYTYSILICGL 585
Query: 393 LAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMP 452
+E+A + LP YSV ++ K R E + +S P
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV--QP 643
Query: 453 TFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIF 512
++Y+ LI + + G + A + M P+ A Y LI
Sbjct: 644 NTVVYNHLI---------------RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 513 DHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
V +A ++ EM G P++F ALI+
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 233/520 (44%), Gaps = 48/520 (9%)
Query: 39 KGL-ADETTYNKLVLACCRDGRVE---EALGILRGMAESDENTYTSLIHLFCDQGQCDKA 94
KG+ +TT N L+ + R + EA ++ D +T+ I+ FC G+ ++A
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
K+F++M + G +P+V T+N ++ R+ EA ++ERG EP LI+++ LV+G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
++ +A +L+EM +KG + Y +LI F G + KA E+K MV KG+
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
+ TY LI C A L +EML G + + ++T ++ F A
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
EM+ + P G+ T+ +I GLC + +ALE+ G D + + +
Sbjct: 460 EMLLRNMSPG--GGLLTT------LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 335 IFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLA 394
+ G C +L +A++++ E+ LG + D + +++ L+S
Sbjct: 512 LHGLCEAGKLDEAFRIQKEI-------LGRGCVMDRV------------SYNTLISGCCG 552
Query: 395 EGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTF 454
+ L++A++ E+ P + YS+ + L ++ EA W +P
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ--FWDDCKRNGMLPDV 610
Query: 455 IIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDH 514
Y +I+ C E ++ D M+ N +P+ VYN LI +
Sbjct: 611 YTYSVMIDGCCKAE---------------RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 515 CRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRR 554
CR G + A ++ +M H G +P+ + +LI+ + + R
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 12/313 (3%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYK 96
+ D T N L+ C G+++EA I + + D +Y +LI C + + D+A+
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
EM+ G P TY+ ++ + EA+ G P++ +++ ++ G C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+ EE +E EM K + + Y LI +C G++ A E++ +M HKGI P++
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
TY LI + + + EA LF+EM GL P+ YT L+ Y Q K L EM
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
K P+ +TY +I G EA +L M E G+ PD+++Y I+
Sbjct: 742 HSKNVHPN--------KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 337 GFCRIRELGKAYK 349
G+ + + +A+K
Sbjct: 794 GYLKQGGVLEAFK 806
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 4/237 (1%)
Query: 43 DETTYNKLVLACCRDGRVEEALGIL----RGMAESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY+ L+ +VEEA+ R D TY+ +I C + ++ + F
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM+ P+ YN ++ AYCR R AL + + +G PN ++ +L++G
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
++EEA+ L +EM +GL + YT+LI + G++ K + EM K + P+ TY
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
+IG ++EA L EM +G+ PD+ TY + Y Q +AF DE
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 4/174 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
+ YN L+ A CR GR+ AL + M + TYTSLI + ++A +F
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM G P+V Y A++ Y + + + +LR + + PN I++ ++ G+
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL 212
G + EA LL EM +KG+ D TY I+ + +G V +AF+ E + I+
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAII 817
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/519 (25%), Positives = 223/519 (42%), Gaps = 47/519 (9%)
Query: 58 GRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATY 113
G +EEA+ M + L+H F G+ D + F +MI G P+V TY
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 114 NAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQ 173
N ++ C++ A G+ + RG P+ +++N+++ GF G++++ +EM
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 174 KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSE 233
D TY +LI+ FC GK+ E EM G+ P+ +Y L+ + C + + +
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 234 AFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSH 293
A + +M R GL P+ TYT L+ A S AF L +EM+ G+ +
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ--------VGVEWNV 437
Query: 294 VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVE 353
VTY A+I GLC +R +EA E+ M G+ P+ SY+ +I GF + + + +A +L E
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 354 MDKKSIS------WLGLWGLYD----DIDKSVMQGL------SHEDTFSNLMSDYLAEGH 397
+ + I +WGL + K VM + ++ ++ LM Y G+
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 398 LEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIY 457
+ L E+ D V + V ++ L K +++A + + L+ I
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 617
Query: 458 DTLIENCSNNEFKSVVGLVKGFGMRGLMK-------------------KAARAHDRMLEG 498
+ C +N+ ++ L + +GL+ +A D+M E
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 677
Query: 499 NYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP 537
K D Y L++ C + KA EM+ G P
Sbjct: 678 GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 170/435 (39%), Gaps = 80/435 (18%)
Query: 143 PNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEM 202
P F+AL G +EEA + +M + + ++ L+H F GK +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 203 KAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRL 262
+M+ G P TY +I +C + + A LF+EM RGL PD TY ++ +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 263 QAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEI 322
+ +EM PD +TYNA+I+ C + LE R M
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDV--------ITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 323 GLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHE 382
GL P+ VSYST++ FC+ + +A K V+M + +GL + +E
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR-----VGL--------------VPNE 402
Query: 383 DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLW 442
T+++L+ G+L A+ L E+ L V V ++V
Sbjct: 403 YTYTSLIDANCKIGNLSDAFRLGNEM-----LQVGVEWNV-------------------- 437
Query: 443 FISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKP 502
+ Y LI+ + E MK+A +M P
Sbjct: 438 ------------VTYTALIDGLCDAE---------------RMKEAEELFGKMDTAGVIP 470
Query: 503 DGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVI 562
+ A YN LI + N+ +A ++ E+ G P + I LC + + + + V+
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI-EAAKVV 529
Query: 563 QNTLRSCNLNDSELL 577
N ++ C + + L+
Sbjct: 530 MNEMKECGIKANSLI 544
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 197/408 (48%), Gaps = 48/408 (11%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
+ TY ++ C+ G+ A+ +LR M E D Y+ +I C G D A+ +F
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM G + ++ TYN ++ +C R+ + +LR +I+R PN+++F+ L+ F +
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 346
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+ EAEEL +EM +G+A D TYTSLI FC + ++KA +M MV KG P+ T+
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C + + +LF++M RG+ D TY L+ + + + A L EM+
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 279 KGFLPDFVT----------------------GISTSHV-----TYNAIIHGLCLLDRAEE 311
+ P+ VT I S + YN IIHG+C + ++
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWG----- 366
A ++ +P G+ P +Y+ +I G C+ L +A L +M++ + G W
Sbjct: 527 AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG-WTYNILI 585
Query: 367 ---LYD-DIDKSVMQ-------GLSHEDTFSNLMSDYLAEGHLEKAYL 403
L D D KSV G S + + ++ D L++G L+K++L
Sbjct: 586 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFL 633
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/586 (23%), Positives = 264/586 (45%), Gaps = 80/586 (13%)
Query: 7 LFKTFLRNRVPPPDVMIRGFAAAWTETEKTNW----------KGLADETTYNKLVLAC-C 55
LF+ + +R P + +A +T++ + KG+A +++ C C
Sbjct: 75 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134
Query: 56 RDGRV---EEALG-ILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVA 111
R ++ A+G I++ E + T+++LI+ C +G+ +A ++ M++ G P +
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194
Query: 112 TYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM 171
T N +V C + EA+ ++ ++E G +PN +++ ++ C G+ A ELL++M
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 172 NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTL 231
++ + LD Y+ +I C G ++ AF + EM KGI + TY LIG C
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 232 SEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT---- 287
+ L ++M++R ++P+ T++ L+ ++ + + +A L EMIH+G PD +T
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 288 -----------------------GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGL 324
G + T+N +I+G C +R ++ LE+ R M G+
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 325 SPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDT 384
D V+Y+T+I GFC + +L A +L EM + + + T
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP-------------------PNIVT 475
Query: 385 FSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVH-YSVFLNVLNKKARITEAKHHLLWF 443
+ L+ G EKA + +I + +D+ Y++ ++ + +++ +A W
Sbjct: 476 YKILLDGLCDNGESEKALEIFEKIEK-SKMELDIGIYNIIIHGMCNASKVDDA-----WD 529
Query: 444 ISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPD 503
++ +L K+ ++ G +G + +A +M E + PD
Sbjct: 530 ------------LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Query: 504 GAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
G YN+LI H G+ K+ + E+ GF+ ++ +I+ L
Sbjct: 578 GWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 235/520 (45%), Gaps = 57/520 (10%)
Query: 57 DGRVEEALGILRGMAESDE----NTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVAT 112
D + ++A+ + R M S ++ L Q D + +M G + ++ T
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 113 YNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMN 172
+ ++ +CR ++ A + +I+ G+EPN I+F+ L+ G C +G++ EA EL+ M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 173 QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLS 232
+ G D T +L++ C GK +A + +MV G P+A TYGP++ +C +
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 233 EAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTS 292
A +L ++M R + D Y+ ++ AF+L +EM K GI+T+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK--------GITTN 297
Query: 293 HVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKV 352
+TYN +I G C R ++ ++LR M + ++P+ V++S +I F + +L +A +L
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 353 EMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFD 412
EM + I+ D I T+++L+ + E HL+KA + +
Sbjct: 358 EMIHRGIA-------PDTI------------TYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 413 YLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR--MPTFIIYDTLIE-------- 462
P +++ +N K RI + L + LR + + Y+TLI+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDG----LELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 463 NCSNNEFKSVVG------------LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLL 510
N + F+ +V L+ G G +KA +++ + + D +YN++
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 511 IFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
I C V A+D++ + G P + + +I LC
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 204/467 (43%), Gaps = 49/467 (10%)
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEE 163
+ FS +Y + + D + +A+ + R +I P +I F+ L + +
Sbjct: 47 SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106
Query: 164 AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIG 223
L ++M KG+A + T + +I+ FC K+ AF +++ G P+ T+ LI
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN 166
Query: 224 SLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
LCL+ +SEA +L M+ G PD T L++ L + ++A L D+M+ G P
Sbjct: 167 GLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP 226
Query: 284 DFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRE 343
+ VTY +++ +C + A+E+LR M E + DAV YS +I G C+
Sbjct: 227 N--------AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 344 LGKAYKLKVEMDKKSISW--------------LGLWG-----LYDDIDKSVMQGLSHEDT 384
L A+ L EM+ K I+ G W L D I + + + T
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV---T 335
Query: 385 FSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFI 444
FS L+ ++ EG L +A L +E+ + P + Y+ ++ K+ + +A + +
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 445 SHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPD 503
S C P ++ LI C N + L + +RG++ D
Sbjct: 396 SKGC--DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV----------------AD 437
Query: 504 GAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
YN LI C G ++ A +++ EMV P++ + L++ LC
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 166/318 (52%), Gaps = 12/318 (3%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
Y L+ CC+ G +E+A + M + ++E TYT LI+ G + ++++ +M
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+ G P++ TYN ++ C+D R ++A + + ERG N++++N L+ G C + K+
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
EA +++ +M G+ + TY +LI FC GK+ KA + ++ +G+ P TY L+
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
C + S A + +EM RG+ P TYT L+ + KA L+ M G +
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
PD H TY+ +IHG C+ + EA + + M E P+ V Y+T+I G+C+
Sbjct: 441 PDV-------H-TYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 343 ELGKAYKLKVEMDKKSIS 360
+A KL EM++K ++
Sbjct: 493 SSYRALKLLKEMEEKELA 510
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 217/504 (43%), Gaps = 81/504 (16%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPS---------------------------- 109
Y +I+ + + + F EM+D GF P
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 110 ------VATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEE 163
V ++ ++ C ++ +L L E GF PN++ + L+ G C KG++E+
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 164 AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIG 223
A++L EM + GL +++TYT LI+ G ++ FEM +M G+ P+ TY ++
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 224 SLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
LC +AF +F EM RG+S + TY L+ + + ++A + D+M G P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 284 DFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRE 343
+ +TYN +I G C + + +AL + R + GLSP V+Y+ ++ GFCR +
Sbjct: 337 NL--------ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 344 LGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYL 403
A K+ EM+++ I + T++ L+ + ++EKA
Sbjct: 389 TSGAAKMVKEMEERGIK-------------------PSKVTYTILIDTFARSDNMEKAIQ 429
Query: 404 LEREINYFDYLPVDVH-YSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIE 462
L + +P DVH YSV ++ K ++ EA + C P +IY+T+I
Sbjct: 430 LRLSMEELGLVP-DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC--EPNEVIYNTMI- 485
Query: 463 NCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHK 522
G+ G +A + M E P+ A Y +I C+ +
Sbjct: 486 --------------LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 523 AYDMYMEMVHYGFAPHMFSVLALI 546
A + +M+ G P S+L+LI
Sbjct: 532 AERLVEKMIDSGIDPST-SILSLI 554
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 147/287 (51%), Gaps = 12/287 (4%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN ++ C+DGR ++A + M E + TY +LI C + + ++A KV +M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G +P++ TYN ++ +C + +AL + R L RG P+L+++N LV GFC KG
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
A ++++EM ++G+ TYT LI F +EKA +++ M G++PD TY L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I C++ ++EA LF+ M+ + P+ Y ++ Y + +A L EM K
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDA 328
P+ +Y +I LC +++EA ++ M + G+ P
Sbjct: 510 APNV--------ASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/532 (23%), Positives = 230/532 (43%), Gaps = 79/532 (14%)
Query: 64 LGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRD 123
L ++ G S T +SL+H + +++ Y I+ +Y +
Sbjct: 63 LQVISGKIHSQFFTSSSLLHYLTESETSKTKFRL---------------YEVIINSYVQS 107
Query: 124 KRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTY 183
+ ++ +++ GF P FN L+ G + E N+ + LD ++
Sbjct: 108 QSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSF 166
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
LI C G++EK+F++ E+ G P+ Y LI C + + +A DLF EM +
Sbjct: 167 GILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK 226
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT---------------- 287
GL + +TYT L++ + F + ++M G P+ T
Sbjct: 227 LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKD 286
Query: 288 -----------GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
G+S + VTYN +I GLC + EA +++ M G++P+ ++Y+T+I
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 337 GFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEG 396
GFC + +LGKA L ++ + +S S++ T++ L+S + +G
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLS------------PSLV-------TYNILVSGFCRKG 387
Query: 397 HLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFII 456
A + +E+ P V Y++ ++ + + +A L + + L +P
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA-IQLRLSMEELGL-VPDVHT 445
Query: 457 YDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCR 516
Y LI GF ++G M +A+R M+E N +P+ +YN +I +C+
Sbjct: 446 YSVLIH---------------GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490
Query: 517 CGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRS 568
G+ ++A + EM AP++ S +IE LC R+ + +++ + S
Sbjct: 491 EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 209/427 (48%), Gaps = 33/427 (7%)
Query: 40 GLADETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAY 95
G D YN L+ C+ R+++A +L M D + TY +I C +G+ D A
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
KV +++ P+V TY ++ A + EAL ++ ++ RG +P++ ++N +++G
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
C +G ++ A E+++ + KG D +Y L+ N+GK E+ ++ +M + P+
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
TY LI +LC + EA +L + M +GL+PD +Y L++A+ + + A +
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
MI G LPD V YN ++ LC +A++ALEI + E+G SP++ SY+T+
Sbjct: 394 MISDGCLPDI--------VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 336 FGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAE 395
+ +A + +EM I D D E T+++++S E
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGI----------DPD---------EITYNSMISCLCRE 486
Query: 396 GHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFI 455
G +++A+ L ++ ++ P V Y++ L K RI +A + L + + C P
Sbjct: 487 GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC--RPNET 544
Query: 456 IYDTLIE 462
Y LIE
Sbjct: 545 TYTVLIE 551
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 209/496 (42%), Gaps = 64/496 (12%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
+ H C G ++ + M+ G++P V ++ + + +A+ ++ ++E+
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKF 153
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
+P++ ++NAL+ GFC ++++A +L M K + D TY +I C++GK++ A
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
++ +++ P TY LI + L+ + EA L EML RGL PD TY ++
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVT---------------------------GISTSH 293
+ +AF + + KG PD ++ +
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 294 VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVE 353
VTY+ +I LC + EEA+ +L+ M E GL+PDA SY +I FCR L A +E
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA----IE 389
Query: 354 MDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDY 413
+ IS G DI ++ +++ G ++A + ++
Sbjct: 390 FLETMIS----DGCLPDIVN-----------YNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 414 LPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVV 473
P Y+ + L A H +L +S+ P I Y+++I +C E
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI--DPDEITYNSMI-SCLCRE----- 486
Query: 474 GLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHY 533
G++ +A M + P YN+++ C+ + A ++ MV
Sbjct: 487 ---------GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 534 GFAPHMFSVLALIEAL 549
G P+ + LIE +
Sbjct: 538 GCRPNETTYTVLIEGI 553
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 129/270 (47%), Gaps = 11/270 (4%)
Query: 20 DVMIRGF--AAAWTETEKTNWKGLADE-----TTYNKLVLACCRDGRVEEALGILRGMAE 72
++++R W E EK K +++ TY+ L+ CRDG++EEA+ +L+ M E
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 73 ----SDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFRE 128
D +Y LI FC +G+ D A + MI G P + YN ++ C++ + +
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 129 ALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
AL I L E G PN S+N + G A ++ EM G+ D+ TY S+I
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481
Query: 189 LFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
C +G V++AFE+ +M P TY ++ C + +A ++ + M+ G P
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
+ TYT L+ ++A L ++++
Sbjct: 542 NETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 194/505 (38%), Gaps = 72/505 (14%)
Query: 169 QEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQ 228
++ + + L D + H C G ++ + MV KG PD LI
Sbjct: 78 RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137
Query: 229 QTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT- 287
+ + +A + E+L + PD Y L++ + + A + D M K F PD VT
Sbjct: 138 RNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 288 --------------------------GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPE 321
+ +TY +I L +EAL+++ M
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 322 IGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS-----ISWLGLW------GLYDD 370
GL PD +Y+T+I G C+ + +A+++ ++ K IS+ L G +++
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 371 IDKSVMQGLSHE-----DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLN 425
+K + + S + T+S L++ +G +E+A L + + P Y +
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 426 VLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGL 484
++ R+ A L IS CL P + Y+T++ C N + + + G G
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCL--PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 485 MKKAARAHD-------------------RMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYD 525
++ + M+ PD YN +I CR G V +A++
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494
Query: 526 MYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTL-RSCNLNDSELLQVLNEID 584
+ ++M F P + + ++ C R V+++ + C N++ ++ I
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI- 553
Query: 585 VREGQTEYLRGELAERAMDGLLLDG 609
G Y R E E A D + +D
Sbjct: 554 ---GFAGY-RAEAMELANDLVRIDA 574
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 214/488 (43%), Gaps = 64/488 (13%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TY+ I+ FC + Q A + +M+ G+ PS+ T N+++ +C R EA+ ++ +
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+E G++P+ ++F LV G K EA L++ M KG D TY ++I+ C +G+
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+ A + +M I D Y +I LC + + +AFDLF +M +G+ PD TY L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFV-----------------------TGISTSH 293
+S ++S A L +M+ K PD V + + H
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 294 -----VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
V YN +I G C R EE +E+ R M + GL + V+Y+T+I GF + R+ A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 349 KLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREI 408
+ +M + D + +M T++ L+ G++E A ++ +
Sbjct: 412 MVFKQM------------VSDGVHPDIM-------TYNILLDGLCNNGNVETALVVFEYM 452
Query: 409 NYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNE 468
D V Y+ + L K ++ E L +S ++ P + Y T++
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKV-EDGWDLFCSLSLKGVK-PNVVTYTTMMS------ 504
Query: 469 FKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYM 528
GF +GL ++A M E P+ YN LI R G+ + ++
Sbjct: 505 ---------GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIK 555
Query: 529 EMVHYGFA 536
EM GFA
Sbjct: 556 EMRSCGFA 563
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 217/508 (42%), Gaps = 84/508 (16%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TY+ + CR ++ AL IL M + T SL++ FC + +A + +M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
++ G+ P T+ +V + + EA+ ++ ++ +G +P+L+++ A++ G C +G+
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+ A LL +M + + D Y ++I C ++ AF++ +M KGI PD TY PL
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH-KG 280
I LC S+A L +ML + ++PD + L+ A+ + + +A L DEM+ K
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
PD V YN +I G C R EE +E+ R M + GL + V+Y+T+I GF +
Sbjct: 352 CFPDVVA--------YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 341 IRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEK 400
R+ A + +M + D + +M T++ L+ G++E
Sbjct: 404 ARDCDNAQMVFKQM------------VSDGVHPDIM-------TYNILLDGLCNNGNVET 444
Query: 401 AYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTL 460
A ++ + D V Y+ + L K ++ + W
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG-----W------------------ 481
Query: 461 IENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNV 520
L ++G+ KP+ Y ++ CR G
Sbjct: 482 -------------DLFCSLSLKGV----------------KPNVVTYTTMMSGFCRKGLK 512
Query: 521 HKAYDMYMEMVHYGFAPHMFSVLALIEA 548
+A +++EM G P+ + LI A
Sbjct: 513 EEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 193/461 (41%), Gaps = 72/461 (15%)
Query: 122 RDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDK 181
+D + +A+G+ +++ P+++ F+ L+ K + L ++M G++ +
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 182 TYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEM 241
TY+ I+ FC + ++ A + +M+ G P T L+ C +SEA L +M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 242 LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIH 301
+ G PD T+T L+ + S+A L + M+ KG PD VT Y A+I+
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT--------YGAVIN 223
Query: 302 GLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI-- 359
GLC + AL +L M + + D V Y+T+I G C+ + + A+ L +M+ K I
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 360 ---------SWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINY 410
S L +G + D S L+SD +LE+ IN
Sbjct: 284 DVFTYNPLISCLCNYGRWSDA--------------SRLLSD-----------MLEKNIN- 317
Query: 411 FDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFI-SHVCLRMPTFIIYDTLIEN-CSNNE 468
P V ++ ++ K+ ++ EA+ + S C P + Y+TLI+ C
Sbjct: 318 ----PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF--PDVVAYNTLIKGFCKYKR 371
Query: 469 FKSVVGLVKGFGMRGLM-------------------KKAARAHDRMLEGNYKPDGAVYNL 509
+ + + + RGL+ A +M+ PD YN+
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 510 LIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
L+ C GNV A ++ M + + +IEALC
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 5/232 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D YN L+ C+ RVEE + + R M++ + TYT+LIH F CD A VF
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+M+ G P + TYN ++ C + AL + + +R + +++++ +++ C
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+E+ +L ++ KG+ + TYT+++ FC KG E+A + EM G LP++ TY
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAF 270
LI + + + +L +EM G + D T+ GL++ + K+F
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKSF 585
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 41/294 (13%)
Query: 35 KTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGMAESDENT----YTSLIHLFCDQG 89
K KG+ D TYN L+ C GR +A +L M E + N + +LI F +G
Sbjct: 275 KMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Query: 90 QCDKAYKVFAEMIDTGFS-PSVATYNAIVLAYCRDKRFREALGILRCLIERGF------- 141
+ +A K++ EM+ + P V YN ++ +C+ KR E + + R + +RG
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 394
Query: 142 ----------------------------EPNLISFNALVQGFCGKGKMEEAEELLQEMNQ 173
P+++++N L+ G C G +E A + + M +
Sbjct: 395 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK 454
Query: 174 KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSE 233
+ + LD TYT++I C GKVE +++ + KG+ P+ TY ++ C + E
Sbjct: 455 RDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 514
Query: 234 AFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
A LF EM G P++ TY L+ A + + L EM GF D T
Sbjct: 515 ADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAST 568
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 38/299 (12%)
Query: 292 SHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLK 351
S V ++ ++ + +++ + + + M +G+S + +YS I FCR +L A +
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 352 VEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYF 411
+M K LG +G S++ G H + S +A L ++
Sbjct: 134 GKMMK-----LG-YGPSIVTLNSLLNGFCHGNRIS-------------EAVALVDQMVEM 174
Query: 412 DYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKS 471
Y P V ++ ++ L + + +EA + + C P + Y +I
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC--QPDLVTYGAVIN--------- 223
Query: 472 VVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMV 531
GL K RG A ++M +G + D +YN +I C+ ++ A+D++ +M
Sbjct: 224 --GLCK----RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 532 HYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLN-DSELLQVLNEIDVREGQ 589
G P +F+ LI LC R++ S ++ + L N+N D L + V+EG+
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-NINPDLVFFNALIDAFVKEGK 335
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 170/324 (52%), Gaps = 15/324 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D T+ L+ C R+EEA+ ++ M E D YT++I C G + A +F
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+M + G P V Y ++V C R+R+A +LR + +R +P++I+FNAL+ F +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK +AEEL EM + +A + TYTSLI+ FC +G V++A +M M KG PD Y
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C + + +A +F EM ++GL+ + TYT L+ + + + A + M+
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEI---GLSPDAVSYSTVI 335
+G P+ TYN ++H LC + ++AL I M + G++P+ +Y+ ++
Sbjct: 381 RGVPPNI--------RTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 336 FGFCRIRELGKAYKLKVEMDKKSI 359
G C +L KA + +M K+ +
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKREM 456
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 152/306 (49%), Gaps = 12/306 (3%)
Query: 59 RVEEALGILRGMAESDENT----YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYN 114
+ EAL + M ES +T L+++ + D + + G S + T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 115 AIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK 174
++ +C+ + A L +++ GFEP++++F +L+ GFC +MEEA ++ +M +
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEA 234
G+ D YT++I C G V A + +M + GI PD Y L+ LC +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 235 FDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHV 294
L + M +R + PD T+ L+ A+ + +F A L +EMI P+
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI--------F 283
Query: 295 TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
TY ++I+G C+ +EA ++ M G PD V+Y+++I GFC+ +++ A K+ EM
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 355 DKKSIS 360
+K ++
Sbjct: 344 SQKGLT 349
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 167/350 (47%), Gaps = 27/350 (7%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D T L++ FC Q A +M+ GF P + T+ +++ +C R EA+ ++
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
++E G +P+++ + ++ C G + A L +M G+ D YTSL++ CN
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
G+ A + M + I PD T+ LI + + +A +L+ EM+R ++P+ TY
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
T L++ + ++ +A + M KG PD V Y ++I+G C + ++A+
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDV--------VAYTSLINGFCKCKKVDDAM 337
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS-----------WL 362
+I M + GL+ + ++Y+T+I GF ++ + A ++ M + + L
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 363 GLWG-------LYDDIDKSVMQGLSHED-TFSNLMSDYLAEGHLEKAYLL 404
G +++D+ K M G++ T++ L+ G LEKA ++
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMV 447
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 202/473 (42%), Gaps = 61/473 (12%)
Query: 88 QGQCDKAYKVFAEMIDTGF-SPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLI 146
+G KA F+ ++D F + Y I+ +F EAL + ++E P++I
Sbjct: 15 KGNSGKALS-FSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSII 73
Query: 147 SFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEM 206
F L+ K + L + G++ D T L++ FC + A +M
Sbjct: 74 DFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM 133
Query: 207 VHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF 266
+ G PD T+ LI CL + EA + +M+ G+ PD YT ++ +
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193
Query: 267 SKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSP 326
+ A L D+M + G PD V Y ++++GLC R +A +LRGM + + P
Sbjct: 194 NYALSLFDQMENYGIRPDV--------VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 327 DAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFS 386
D ++++ +I F + + A +L EM + SI+ + T++
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA-------------------PNIFTYT 286
Query: 387 NLMSDYLAEGHLEKA----YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLW 442
+L++ + EG +++A YL+E + P V Y+ +N K ++ +A + +
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETK----GCFPDVVAYTSLINGFCKCKKVDDA-MKIFY 341
Query: 443 FISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKP 502
+S L T I Y TLI+ GFG G A M+ P
Sbjct: 342 EMSQKGLTGNT-ITYTTLIQ---------------GFGQVGKPNVAQEVFSHMVSRGVPP 385
Query: 503 DGAVYNLLIFDHCRC--GNVHKAYDMYMEMVHY---GFAPHMFSVLALIEALC 550
+ YN+L+ HC C G V KA ++ +M G AP++++ L+ LC
Sbjct: 386 NIRTYNVLL--HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 113/214 (52%), Gaps = 7/214 (3%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYK 96
D Y L+ C+ +V++A+ I M++ + TYT+LI F G+ + A +
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER---GFEPNLISFNALVQ 153
VF+ M+ G P++ TYN ++ C + + ++AL I + +R G PN+ ++N L+
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
G C GK+E+A + ++M ++ + + TYT +I C GKV+ A + + KG+ P
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
+ TY +I L + EA LF++M G+S
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 7/221 (3%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TY L+ C +G V+EA + M D YTSLI+ FC + D A K+F EM
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G + + TY ++ + + + A + ++ RG PN+ ++N L+ C GK+
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 162 EEAEELLQEMNQK---GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
++A + ++M ++ G+A + TY L+H C GK+EKA + +M + + TY
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
+I +C + A +LF + +G+ P+ TYT ++S
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/540 (24%), Positives = 246/540 (45%), Gaps = 53/540 (9%)
Query: 5 RVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADET-TYNKLVLACCRDGRVEEA 63
R L F N++ ++ F + EK G++ TYN L+ CR ++ A
Sbjct: 80 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 139
Query: 64 LGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLA 119
L +L M E T +SL++ +C + A + +M++ G+ P T+ ++
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 120 YCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD 179
+ EA+ ++ +++RG +PNL+++ +V G C +G ++ A LL +M + +
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQ 239
Y+++I C + A + EM +KG+ P+ TY LI LC + S+A L
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
+M+ R ++P+ T+ L+ A+ + + +A L DEMI + PD T Y+++
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT--------YSSL 371
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
I+G C+ DR +EA + M P+ V+Y+T+I GFC+ + + + +L EM ++
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR-- 429
Query: 360 SWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVH 419
GL G + T++ L+ + + A ++ +++ P +
Sbjct: 430 ---GLVG--------------NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 420 YSVFLNVLNKKARITEAKHHLLWFISHVCLRM-PTFIIYDTLIEN-CSNNEFKSVVGLVK 477
Y+ L+ L K ++ +A ++ F +M PT Y+ +IE C + + L
Sbjct: 473 YNTLLDGLCKNGKLEKA---MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 478 GFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP 537
++G+ KPD +YN +I CR G +A ++ +M G P
Sbjct: 530 SLSLKGV----------------KPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 236/517 (45%), Gaps = 55/517 (10%)
Query: 59 RVEEALGILRGMAESDENT----YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYN 114
++++A+G+ GM +S + L+ + D + +M G S ++ TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 115 AIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK 174
++ +CR + AL +L +++ G+EP++++ ++L+ G+C ++ +A L+ +M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEA 234
G D T+T+LIH K +A + MV +G P+ TYG ++ LC + + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 235 FDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHV 294
F+L +M + + Y+ ++ + A +L EM +KG P+ +
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV--------I 296
Query: 295 TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
TY+++I LC +R +A +L M E ++P+ V+++ +I F + +L +A KL EM
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 355 DKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA-YLLEREINYFDY 413
K+S ID + T+S+L++ + L++A ++ E I+ D
Sbjct: 357 IKRS------------IDPDIF-------TYSSLINGFCMHDRLDEAKHMFELMISK-DC 396
Query: 414 LPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLI------ENCSNN 467
P V Y+ +N K RI E L +S L T + Y TLI +C N
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGV-ELFREMSQRGLVGNT-VTYTTLIHGFFQARDCDNA 454
Query: 468 E--FKSVVG------------LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFD 513
+ FK +V L+ G G ++KA + + +P YN++I
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 514
Query: 514 HCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
C+ G V +D++ + G P + +I C
Sbjct: 515 MCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 143/300 (47%), Gaps = 12/300 (4%)
Query: 33 TEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQ 88
TE N + TY+ L+ C R +A +L M E N T+ +LI F +
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 89 GQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISF 148
G+ +A K++ EMI P + TY++++ +C R EA + +I + PN++++
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 149 NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH 208
N L+ GFC +++E EL +EM+Q+GL + TYT+LIH F + A + +MV
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSK 268
G+ P+ TY L+ LC L +A +F+ + R + P TY ++ +
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 269 AFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDA 328
+ L + KG PD + YN +I G C EEA + R M E G PD+
Sbjct: 524 GWDLFCSLSLKGVKPDV--------IIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 198/485 (40%), Gaps = 52/485 (10%)
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
FS Y I+ + +A+G+ +++ P++ FN L+ K +
Sbjct: 45 AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
L ++M + G++ + TY LI+ FC + ++ A + +M+ G P T L+
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
C + +S+A L +M+ G PD T+T L+ L + S+A L D M+ +G P+
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL 344
VTY +++GLC + A +L M + + V YSTVI C+ R
Sbjct: 225 L--------VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 345 GKAYKLKVEMDKKS-----ISWLGL---------WG-----LYDDIDKSVMQGLSHEDTF 385
A L EM+ K I++ L W L D I++ + + TF
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV---TF 333
Query: 386 SNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFIS 445
+ L+ ++ EG L +A L E+ P YS +N R+ EAKH IS
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 446 HVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLM------------------- 485
C P + Y+TLI C V L + RGL+
Sbjct: 394 KDCF--PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 486 KKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLAL 545
A +M+ P+ YN L+ C+ G + KA ++ + P +++ +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 546 IEALC 550
IE +C
Sbjct: 512 IEGMC 516
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 4/177 (2%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAE 100
TYN L+ C+ R++E + + R M++ + TYT+LIH F CD A VF +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M+ G P++ TYN ++ C++ + +A+ + L EP + ++N +++G C GK
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+E+ +L ++ KG+ D Y ++I FC KG E+A + +M G LPD+ T
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 39/247 (15%)
Query: 45 TTYNKLVLACCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
T+N L+ A ++G++ EA + ++ + D TY+SLI+ FC + D+A +F
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGF------------------- 141
MI P+V TYN ++ +C+ KR E + + R + +RG
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 142 ----------------EPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTS 185
PN++++N L+ G C GK+E+A + + + + + TY
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 186 LIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
+I C GKVE +++ + KG+ PD Y +I C + EA LF++M G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 246 LSPDNKT 252
PD+ T
Sbjct: 571 PLPDSGT 577
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 156/375 (41%), Gaps = 44/375 (11%)
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
+ L+ K + + +M GI + TY LI C + +S A L +M+
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
+ G P T + L++ Y + S A L D+M+ G+ PD +T+ +IHG
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD--------TITFTTLIHG 199
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWL 362
L L ++A EA+ ++ M + G P+ V+Y V+ G C+ ++ A+ L +M+ I
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
Query: 363 GLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSV 422
+ +Y + S+ + HED NL ++ +G P + YS
Sbjct: 260 VV--IYSTVIDSLCK-YRHEDDALNLFTEMENKG----------------VRPNVITYSS 300
Query: 423 FLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMR 482
++ L R ++A L +IE N + L+ F
Sbjct: 301 LISCLCNYERWSDASRLL-----------------SDMIERKINPNVVTFNALIDAFVKE 343
Query: 483 GLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSV 542
G + +A + +D M++ + PD Y+ LI C + +A M+ M+ P++ +
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 543 LALIEALCCVRRYNK 557
LI C +R ++
Sbjct: 404 NTLINGFCKAKRIDE 418
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 193/411 (46%), Gaps = 51/411 (12%)
Query: 39 KGL-ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDK 93
KGL D TY +V C+ G + AL +L M E+ D Y+++I C G
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A +F+EM++ G +P+V TYN ++ +C R+ +A +LR +IER P++++FNAL+
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
+GK+ EAE+L EM + + D TY S+I+ FC + + A M M P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----P 430
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
D T+ +I C + + E L +E+ RRGL + TY L+ + + A L
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 274 DEMIHKGFLPDFVT---------------------------GISTSHVTYNAIIHGLCLL 306
EMI G PD +T I V YN IIHG+C
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 307 DRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA----YKLKV---EMDKKSI 359
+ +EA ++ +P G+ PD +Y+ +I GFC + A +K+K E D +
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 360 SWLGLWGL-YDDIDKSV-------MQGLSHEDTFSNLMSDYLAEGHLEKAY 402
+ L L +IDKS+ G S + +++D + +G L+K++
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSF 661
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/517 (24%), Positives = 237/517 (45%), Gaps = 63/517 (12%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
D T+N L+ C + R+ EAL + M E T + +A +F +M+
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVE------TGFL----------EAVALFDQMV 218
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+ G +P V T+N ++ C + R EA ++ ++ +G +++++ +V G C G +
Sbjct: 219 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 278
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
A LL +M + + D Y+++I C G A + +EM+ KGI P+ TY +I
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
C S+A L ++M+ R ++PD T+ L+SA + + +A L DEM+H+
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
PD VTYN++I+G C +R ++A + M ++ SPD V+++T+I +CR +
Sbjct: 399 PD--------TVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAK 446
Query: 343 ELGKAYKLKVEMDKKSI-----SWLGLWGLYDDIDK-SVMQGL-----SHEDTFSNLMSD 391
+ + +L E+ ++ + ++ L + ++D + Q L SH + +
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 392 YLAEGHLEKAYLLEREINYFDYLPVD------VHYSVFLNVLNKKARITEAKHHLLWFIS 445
L G E LE + F+ + + V Y++ ++ + K +++ EA
Sbjct: 507 ILLYGFCENEK-LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 446 HVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGA 505
H P Y+ +I GF + + A +M + ++PD +
Sbjct: 566 HGV--EPDVQTYNVMI---------------SGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 506 VYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSV 542
YN LI + G + K+ ++ EM GF+ F++
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/522 (23%), Positives = 221/522 (42%), Gaps = 67/522 (12%)
Query: 48 NKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMID 103
NK++ R R + A+ + R M + ++ LI FCD + + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEE 163
GF P V T+N ++ C + R EAL + ++E GF E
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL--------------------E 209
Query: 164 AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIG 223
A L +M + GL T+ +LI+ C +G+V +A + +MV KG+ D TYG ++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 224 SLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
+C A +L +M + PD Y+ ++ S A +L EM+ KG P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 284 DFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRE 343
+ T YN +I G C R +A +LR M E ++PD ++++ +I + +
Sbjct: 330 NVFT--------YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 344 LGKAYKLKVEMDKK-----SISWLGL-WGL-----YDDIDKSVMQGLSHED--TFSNLMS 390
L +A KL EM + ++++ + +G +DD K + ++ D TF+ ++
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA-KHMFDLMASPDVVTFNTIID 440
Query: 391 DYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISH-VCL 449
Y +++ L REI+ + Y+ ++ + + A+ ISH VC
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC- 499
Query: 450 RMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYN 508
P I + L+ C N + + + L + M + D YN
Sbjct: 500 --PDTITCNILLYGFCENEKLEEALELFEVIQMSKI----------------DLDTVAYN 541
Query: 509 LLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
++I C+ V +A+D++ + +G P + + +I C
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 195/476 (40%), Gaps = 67/476 (14%)
Query: 92 DKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
D A F M+ + + N ++ + R R A+ + R + R N+ SFN L
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL 147
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
++ FC K+ + ++ + G D T+ +L+H C + ++ +A + MV G
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
L EA LF +M+ GL+P T+ L++ L+ + +A
Sbjct: 208 L--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
L ++M+ KG D VTY I++G+C + + AL +L M E + PD V Y
Sbjct: 248 LVNKMVGKGLHIDV--------VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 332 STVIFGFCRIRELGKAYKLKVEMDKKSIS--------------WLGLWGLYDDIDKSVMQ 377
S +I C+ A L EM +K I+ G W + + +++
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 378 GLSHED--TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITE 435
+ D TF+ L+S + EG L +A L E+ + P V Y+ + K R +
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 436 AKHHLLWFISHVCLRMPTFIIYDTLIE-NCSNNEFKSVVGLVKGFGMRGLMKKAARAHDR 494
AKH S P + ++T+I+ C + L++ RGL+
Sbjct: 420 AKHMFDLMAS------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV--------- 464
Query: 495 MLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
+ YN LI C N++ A D++ EM+ +G P + L+ C
Sbjct: 465 -------ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 131/325 (40%), Gaps = 50/325 (15%)
Query: 294 VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL-------GK 346
V N +I ++R + A+ + R M + + S++ +I FC +L GK
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 347 AYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMS--DYLAE-GHLEKAYL 403
KL + D + + L + GL ED S ++ Y+ E G LE L
Sbjct: 167 LTKLGFQPDVVTFNTL-------------LHGLCLEDRISEALALFGYMVETGFLEAVAL 213
Query: 404 LEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFIS---HVCLRMPTFIIYDTL 460
++ + PV + ++ +N L + R+ EA + + H+ + Y T+
Sbjct: 214 FDQMVE-IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI-----DVVTYGTI 267
Query: 461 IENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNV 520
V G G K A +M E + KPD +Y+ +I C+ G+
Sbjct: 268 ---------------VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHH 312
Query: 521 HKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVL 580
A ++ EM+ G AP++F+ +I+ C R++ ++++ + D L
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 581 NEIDVREG---QTEYLRGELAERAM 602
V+EG + E L E+ R +
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCI 397
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/542 (24%), Positives = 240/542 (44%), Gaps = 88/542 (16%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
+NKL+ A + + E + + M D TY+ I+ FC + Q A V A+M+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
G+ P + T ++++ YC KR +A+ ++ ++E G++P+ +F L+ G K
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK--------------------------- 195
EA L+ +M Q+G D TY ++++ C +G
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 196 --------VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
VE A ++ EM KGI P+ TY LI LC S+A L ML + ++
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 248 PDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLD 307
P+ T+ L+ A+ + + +A L +EMI + PD +TYN +I+G C+ +
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD--------TITYNLLINGFCMHN 377
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGL 367
R +EA ++ + M P+ +Y+T+I GFC+ + + +L EM ++ GL G
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR-----GLVG- 431
Query: 368 YDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDV-HYSVFLNV 426
+ T++ ++ + G + A ++ +++ + +P D+ YS+ L+
Sbjct: 432 -------------NTVTYTTIIQGFFQAGDCDSAQMVFKQM-VSNRVPTDIMTYSILLHG 477
Query: 427 LNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMK 486
L ++ A + ++ + + F IY+T+IE G+ K
Sbjct: 478 LCSYGKLDTA-LVIFKYLQKSEMELNIF-IYNTMIE-----------GMCKA-------G 517
Query: 487 KAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALI 546
K A D + KPD YN +I C + +A D++ +M G P+ + LI
Sbjct: 518 KVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 547 EA 548
A
Sbjct: 578 RA 579
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/516 (24%), Positives = 240/516 (46%), Gaps = 52/516 (10%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY+ + CR ++ AL +L M E D T +SL++ +C + A +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+M++ G+ P T+ ++ + EA+ ++ +++RG +P+L+++ +V G C +
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G ++ A LL +M + + + ++I C VE A ++ EM KGI P+ TY
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI LC S+A L ML + ++P+ T+ L+ A+ + + +A L +EMI
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
+ PD +TYN +I+G C+ +R +EA ++ + M P+ +Y+T+I GF
Sbjct: 357 RSIDPD--------TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHL 398
C+ + + +L EM ++ GL G + T++ ++ + G
Sbjct: 409 CKCKRVEDGVELFREMSQR-----GLVG--------------NTVTYTTIIQGFFQAGDC 449
Query: 399 EKAYLLEREINYFDYLPVDV-HYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIY 457
+ A ++ +++ + +P D+ YS+ L+ L ++ A + ++ + + FI Y
Sbjct: 450 DSAQMVFKQM-VSNRVPTDIMTYSILLHGLCSYGKLDTA-LVIFKYLQKSEMELNIFI-Y 506
Query: 458 DTLIEN--------------CSNNEFKSVVG---LVKGFGMRGLMKKAARAHDRMLEGNY 500
+T+IE CS + VV ++ G + L+++A +M E
Sbjct: 507 NTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 501 KPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFA 536
P+ YN LI + R + + ++ EM GF
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFV 602
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 190/444 (42%), Gaps = 46/444 (10%)
Query: 143 PNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEM 202
P+++ FN L+ K E L ++M G++ D TY+ I+ FC + ++ A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 203 KAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRL 262
A+M+ G PD T L+ C + +S+A L +M+ G PD T+T L+ L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 263 QAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEI 322
+ S+A L D+M+ +G PD VTY +++GLC + AL +L M
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDL--------VTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 323 GLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS-----------ISWLGLWGLYDDI 371
+ + V ++T+I C+ R + A L EM+ K I+ L +G + D
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 372 DKSVMQGLSHED-----TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNV 426
+ + L + TF+ L+ + EG L +A L E+ P + Y++ +N
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 427 LNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIE---NCSNNE----------FKSVV 473
R+ EAK + +S CL P Y+TLI C E + +V
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCL--PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 474 G-------LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDM 526
G +++GF G A +M+ D Y++L+ C G + A +
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 527 YMEMVHYGFAPHMFSVLALIEALC 550
+ + ++F +IE +C
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMC 514
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 182/450 (40%), Gaps = 58/450 (12%)
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
G P+V ++ + + C ++ F A G R ++ R ++I K+++A
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREIL-RNRLSDII-------------KVDDA 67
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
+L +M + + L+ K E + +M GI D TY I
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
C + LS A + +M++ G PD T + L++ Y + S A L D+M+ G+ PD
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL 344
T+ +IHGL L ++A EA+ ++ M + G PD V+Y TV+ G C+ ++
Sbjct: 188 --------TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 345 GKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLL 404
A L +M+ I ++ F+ ++ H+E A L
Sbjct: 240 DLALNLLNKMEAARIK-------------------ANVVIFNTIIDSLCKYRHVEVAVDL 280
Query: 405 EREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENC 464
E+ P V Y+ +N L R ++A L ++E
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL-----------------SNMLEKK 323
Query: 465 SNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAY 524
N + L+ F G + +A + H+ M++ + PD YNLLI C + +A
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 525 DMYMEMVHYGFAPHMFSVLALIEALCCVRR 554
M+ MV P++ + LI C +R
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 36/279 (12%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAE 100
T+N L+ A ++G++ EA + M + D TY LI+ FC + D+A ++F
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M+ P++ TYN ++ +C+ KR + + + R + +RG N +++ ++QGF G
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEM-----KAEM--------- 206
+ A+ + ++M + D TY+ L+H C+ GK++ A + K+EM
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 207 ------------------VHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
I PD TY +I LC ++ L EA DLF++M G P
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
++ TY L+ A + + L EM GF+ D T
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 160/409 (39%), Gaps = 67/409 (16%)
Query: 210 GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKA 269
G P ++ L GS C +++ + A ++E+LR LS K A
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKV--------------DDA 67
Query: 270 FHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAV 329
L +M+ P S V +N ++ + +++ E + + M +G+S D
Sbjct: 68 VDLFGDMVKSRPFP--------SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 330 SYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLM 389
+YS I FCR +L A + +M K G DI T S+L+
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMK--------LGYEPDIV-----------TLSSLL 160
Query: 390 SDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCL 449
+ Y + A L ++ Y P ++ ++ L + +EA + + C
Sbjct: 161 NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC- 219
Query: 450 RMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNL 509
P + Y T+ V G RG + A ++M K + ++N
Sbjct: 220 -QPDLVTYGTV---------------VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 510 LIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSC 569
+I C+ +V A D++ EM G P++ + +LI LC R++ S ++ N L
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 570 NLNDSELLQVLNEIDVREG---QTEYLRGELAERAMD------GLLLDG 609
+ L + +EG + E L E+ +R++D LL++G
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 5 RVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEAL 64
+++FK + NRVP D+M TY+ L+ C G+++ AL
Sbjct: 453 QMVFKQMVSNRVPT-DIM-----------------------TYSILLHGLCSYGKLDTAL 488
Query: 65 GILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAY 120
I + + +S+ Y ++I C G+ +A+ +F + P V TYN ++
Sbjct: 489 VIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGL 545
Query: 121 CRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDD 180
C + +EA + R + E G PN ++N L++ + EL++EM G D
Sbjct: 546 CSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA 605
Query: 181 KTYTSLIHLFCNKGKVEKAF 200
T SL+ + G+++K+F
Sbjct: 606 ST-ISLVTNMLHDGRLDKSF 624
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/553 (24%), Positives = 243/553 (43%), Gaps = 50/553 (9%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D Y S++ + C + +V M G + ++ ++++Y R + R+AL +L
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ G EPNL+ N + F ++E+A L+ M G+ + TY +I +C+
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRR-GLSPDNKT 252
+VE+A E+ +M KG LPD +Y ++G LC ++ + E DL ++M + GL PD T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 253 YTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEA 312
Y L+ +A + KGF D + Y+AI+H LC R EA
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRID--------KLGYSAIVHALCKEGRMSEA 437
Query: 313 LEILRGMPEIG-LSPDAVSYSTVIFGFCRIRELGKAYKLKVEM-----DKKSISWLGLWG 366
+++ M G PD V+Y+ V+ GFCR+ E+ KA KL M ++S+ L
Sbjct: 438 KDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLN 497
Query: 367 LYDDIDKSV----MQGLSHED-------TFSNLMSDYLAEGHLEKAYLLEREINYFDYLP 415
KS+ M +S E T+S +M EG L +A + RE+ + P
Sbjct: 498 GMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP 557
Query: 416 VDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVG 474
V ++ L L + R EA+ + ++ C + + T+I C N+E + +
Sbjct: 558 GPVEINLLLQSLCRDGRTHEARKFMEECLNKGC--AINVVNFTTVIHGFCQNDELDAALS 615
Query: 475 -------------------LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHC 515
LV G +G + +A +ML P Y +I +C
Sbjct: 616 VLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYC 675
Query: 516 RCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSE 575
+ G V + +M+ +++ +IE LC + + + ++ LR+ + +D++
Sbjct: 676 QMGKVDDLVAILEKMISRQKCRTIYN--QVIEKLCVLGKLEEADTLLGKVLRTASRSDAK 733
Query: 576 LLQVLNEIDVREG 588
L E +++G
Sbjct: 734 TCYALMEGYLKKG 746
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 228/518 (44%), Gaps = 61/518 (11%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAE 100
TYN ++ C RVEEA+ +L M D+ +Y +++ C + + + + +
Sbjct: 313 VTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKK 372
Query: 101 MI-DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
M + G P TYN ++ + EAL L+ E+GF + + ++A+V C +G
Sbjct: 373 MAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEG 432
Query: 160 KMEEAEELLQEMNQKGLALDD-KTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
+M EA++L+ EM KG D TYT++++ FC G+V+KA ++ M G P+ +Y
Sbjct: 433 RMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSY 492
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
L+ +C EA ++ SP++ TY+ +M R + + S+A + EM+
Sbjct: 493 TALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVL 552
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
KGF P V N ++ LC R EA + + G + + V+++TVI GF
Sbjct: 553 KGFFP--------GPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 604
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED--TFSNLMSDYLAEG 396
C+ EL A + +M +L I+K H D T++ L+ +G
Sbjct: 605 CQNDELDAALSVLDDM------YL--------INK-------HADVFTYTTLVDTLGKKG 643
Query: 397 HLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFII 456
+ +A L +++ + P V Y ++ + ++ + L+ + + R I
Sbjct: 644 RIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDD----LVAILEKMISRQKCRTI 699
Query: 457 YDTLIE--------------------NCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRML 496
Y+ +IE S ++ K+ L++G+ +G+ A + RM
Sbjct: 700 YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMF 759
Query: 497 EGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYG 534
N PD + L G V +A + + +V G
Sbjct: 760 NRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 165/352 (46%), Gaps = 19/352 (5%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYK 96
+ D+ TYN L+ + +EAL L+ E D+ Y++++H C +G+ +A
Sbjct: 380 VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKD 439
Query: 97 VFAEMIDTGF-SPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
+ EM+ G P V TY A+V +CR +A +L+ + G +PN +S+ AL+ G
Sbjct: 440 LINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
C GK EA E++ + + + TY+ ++H +GK+ +A ++ EMV KG P
Sbjct: 500 CRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGP 559
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
L+ SLC EA +E L +G + + +T ++ + + A + D+
Sbjct: 560 VEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDD 619
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
M ++ TY ++ L R EA E+++ M G+ P V+Y TVI
Sbjct: 620 M--------YLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671
Query: 336 FGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKS--VMQGLSHEDTF 385
+C ++GK L V + +K IS +Y+ + + V+ L DT
Sbjct: 672 HRYC---QMGKVDDL-VAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTL 719
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 170/386 (44%), Gaps = 61/386 (15%)
Query: 43 DETTYNKLVLACCRDGRVEEALGIL-----RGMAESDENTYTSLIHLFCDQGQCDKAYKV 97
D+ Y+ +V A C++GR+ EA ++ +G D TYT++++ FC G+ DKA K+
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 476
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCR----------------------------------- 122
M G P+ +Y A++ CR
Sbjct: 477 LQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 536
Query: 123 DKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKT 182
+ + EA ++R ++ +GF P + N L+Q C G+ EA + ++E KG A++
Sbjct: 537 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
+T++IH FC +++ A + +M D TY L+ +L + ++EA +L ++ML
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
+G+ P TY ++ Y + + ++MI + YN +I
Sbjct: 657 HKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR----------QKCRTIYNQVIEK 706
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL-----------K 351
LC+L + EEA +L + DA + ++ G+ + AYK+
Sbjct: 707 LCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPD 766
Query: 352 VEMDKKSISWLGLWGLYDDIDKSVMQ 377
V+M +K L L G D+ DK +++
Sbjct: 767 VKMCEKLSKRLVLKGKVDEADKLMLR 792
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 108/218 (49%), Gaps = 8/218 (3%)
Query: 39 KGLA-DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDK 93
KG A + + ++ C++ ++ AL +L M +D TYT+L+ +G+ +
Sbjct: 588 KGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAE 647
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A ++ +M+ G P+ TY ++ YC+ + + + IL +I R + +N +++
Sbjct: 648 ATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVIE 705
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
C GK+EEA+ LL ++ + D KT +L+ + KG A+++ M ++ ++P
Sbjct: 706 KLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIP 765
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG-LSPDN 250
D L L L+ + EA L ++ RG +SP +
Sbjct: 766 DVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQS 803
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 161/333 (48%), Gaps = 28/333 (8%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D T + L+ C+ RV +A+ ++ M E D Y ++I C G + A ++F
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M G TYN++V C R+ +A ++R ++ R PN+I+F A++ F +
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 257
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK EA +L +EM ++ + D TY SLI+ C G+V++A +M MV KG LPD TY
Sbjct: 258 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C + + E LF+EM +RGL D TY ++ Y + A + M
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377
Query: 279 KGFLPDFV------------------------TGISTSHVTYNAIIHGLCLLDRAEEALE 314
+ + + + I TYN +IHG+C + E+A +
Sbjct: 378 RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437
Query: 315 ILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA 347
+ R + GL PD VSY+T+I GFCR R+ K+
Sbjct: 438 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 183/372 (49%), Gaps = 25/372 (6%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D +Y +I+ C + A V +M+ G+ P V T ++++ +C+ R +A+ ++
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ E GF P+++ +N ++ G C G + +A EL M + G+ D TY SL+ C
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
G+ A + +MV + I+P+ T+ +I + SEA L++EM RR + PD TY
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
L++ + + +A + D M+ KG LPD VTYN +I+G C R +E
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV--------VTYNTLINGFCKSKRVDEGT 334
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK------SISWLGL--- 364
++ R M + GL D ++Y+T+I G+ + A ++ MD + SI GL
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMN 394
Query: 365 WG------LYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDV 418
W L++++ KS ++ T++ ++ G++E A+ L R ++ P V
Sbjct: 395 WRVEKALVLFENMQKSEIE--LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 419 HYSVFLNVLNKK 430
Y+ ++ +K
Sbjct: 453 SYTTMISGFCRK 464
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 205/451 (45%), Gaps = 57/451 (12%)
Query: 92 DKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
D +F M G + +YN ++ CR RF AL ++ +++ G+EP++++ ++L
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
+ GFC ++ +A +L+ +M + G D Y ++I C G V A E+ M G+
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
DA TY L+ LC S+A L ++M+ R + P+ T+T ++ + + +FS+A
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
L +EM + PD T YN++I+GLC+ R +EA ++L M G PD V+Y
Sbjct: 266 LYEEMTRRCVDPDVFT--------YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317
Query: 332 STVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSD 391
+T+I GFC+ + + + KL EM ++ GL G D I T++ ++
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQR-----GLVG--DTI------------TYNTIIQG 358
Query: 392 YLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWF----ISHV 447
Y G + A + + D P YS+ L L R+ +A L+ F S +
Sbjct: 359 YFQAGRPDAA---QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA---LVLFENMQKSEI 412
Query: 448 CLRMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAV 506
L + T Y+ +I C + L + +GL KPD
Sbjct: 413 ELDITT---YNIVIHGMCKIGNVEDAWDLFRSLSCKGL----------------KPDVVS 453
Query: 507 YNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP 537
Y +I CR K+ +Y +M G P
Sbjct: 454 YTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 152/321 (47%), Gaps = 15/321 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D +YN ++ CR R AL ++ M E D T +SLI+ FC + A +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
++M + GF P V YN I+ C+ +A+ + + G + +++N+LV G C
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G+ +A L+++M + + + T+T++I +F +GK +A ++ EM + + PD TY
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI LC+ + EA + M+ +G PD TY L++ + + + L EM
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
+G + D +TYN II G R + A EI M P+ +YS +++G
Sbjct: 343 RGLVGD--------TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGL 391
Query: 339 CRIRELGKAYKLKVEMDKKSI 359
C + KA L M K I
Sbjct: 392 CMNWRVEKALVLFENMQKSEI 412
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 15/289 (5%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKV 97
AD TYN LV C GR +A ++R M D T+T++I +F +G+ +A K+
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
+ EM P V TYN+++ C R EA +L ++ +G P+++++N L+ GFC
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+++E +L +EM Q+GL D TY ++I + G+ + A E+ + M + P+ T
Sbjct: 327 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRT 383
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
Y L+ LC+ + +A LF+ M + + D TY ++ A+ L +
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSP 326
KG PD V+Y +I G C + +++ + R M E GL P
Sbjct: 444 CKGLKPDV--------VSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 197/488 (40%), Gaps = 101/488 (20%)
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+F +MI + PS+ ++ ++ + K + + + + G +L S+N ++ C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+ A ++ +M + G D T +SLI+ FC +V A ++ ++M G PD
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
Y +I C +++A +LF M R G+ D TY L++ ++S A L +M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 277 IHKGFLPDFVTGISTSHV---------------------------TYNAIIHGLCLLDRA 309
+ + +P+ +T + V TYN++I+GLC+ R
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 310 EEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYD 369
+EA ++L M G PD V+Y+T+I GFC+ + + + KL EM ++ GL G D
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR-----GLVG--D 348
Query: 370 DIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNK 429
I T++ ++ Y G + A + + D P YS+ L L
Sbjct: 349 TI------------TYNTIIQGYFQAGRPDAA---QEIFSRMDSRPNIRTYSILLYGLCM 393
Query: 430 KARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAA 489
R+ +A L EN +E +
Sbjct: 394 NWRVEKAL---------------------VLFENMQKSEIEL------------------ 414
Query: 490 RAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
D YN++I C+ GNV A+D++ + G P + S +I
Sbjct: 415 -------------DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 550 CCVRRYNK 557
C R+++K
Sbjct: 462 CRKRQWDK 469
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 95/177 (53%), Gaps = 7/177 (3%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYK 96
L D TYN L+ C+ RV+E + R MA+ D TY ++I + G+ D A +
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+F+ M P++ TY+ ++ C + R +AL + + + E ++ ++N ++ G C
Sbjct: 371 IFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
G +E+A +L + ++ KGL D +YT++I FC K + +K+ + +M G+LP
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 236/522 (45%), Gaps = 63/522 (12%)
Query: 1 MKLLRVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADE----------TTYNKL 50
+ LLR + + L V + +IRGF E EK LA+E T+ L
Sbjct: 162 VSLLREMRRNSLMPDVFSYNTVIRGFCEG-KELEKA--LELANEMKGSGCSWSLVTWGIL 218
Query: 51 VLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGF 106
+ A C+ G+++EA+G L+ M E+D YTSLI FCD G+ D+ +F E+++ G
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 107 SPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEE 166
SP TYN ++ +C+ + +EA I +IERG PN+ ++ L+ G CG GK +EA +
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 167 LLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLC 226
LL M +K + TY +I+ C G V A E+ M + PD TY L+G LC
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 227 LQQTLSEAFDLFQEMLRRG--LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
+ L EA L ML+ PD +Y L+ + + +A + D ++ K D
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL 344
VT N +++ +A+E+ + + + + ++ +Y+ +I GFC+ L
Sbjct: 459 --------RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGML 510
Query: 345 GKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLL 404
A L +M ++ SV ++ L+S EG L++A+ L
Sbjct: 511 NVAKGLLCKMR------------VSELQPSVFD-------YNCLLSSLCKEGSLDQAWRL 551
Query: 405 EREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENC 464
E+ + P V +++ ++ K I A LL +S L P Y LI
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA-ESLLVGMSRAGLS-PDLFTYSKLI--- 606
Query: 465 SNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAV 506
N F + G + +A D+M++ ++PD +
Sbjct: 607 --NRFLKL----------GYLDEAISFFDKMVDSGFEPDAHI 636
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 226/502 (45%), Gaps = 44/502 (8%)
Query: 63 ALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCR 122
AL + RG A + N + L+ C +C KA + EM P V +YN ++ +C
Sbjct: 131 ALMLKRGFAFNVYN-HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189
Query: 123 DKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKT 182
K +AL + + G +L+++ L+ FC GKM+EA L+EM GL D
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
YTSLI FC+ G++++ + E++ +G P A TY LI C L EA ++F+ M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
RG+ P+ TYTGL+ + +A L + MI K P+ VTYN II+
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN--------AVTYNIIINK 361
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS---- 358
LC +A+EI+ M + PD ++Y+ ++ G C +L +A KL M K S
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 359 ---ISWLGLW-GLYD--------DIDKSVMQGLSHED--TFSNLMSDYLAEGHLEKAYLL 404
IS+ L GL DI +++ L D T + L++ L G + KA L
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 405 EREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENC 464
++I+ + Y+ ++ K + AK L V P+ Y NC
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM--RVSELQPSVFDY-----NC 534
Query: 465 SNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAY 524
L+ G + +A R + M N PD +N++I + G++ A
Sbjct: 535 ----------LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 525 DMYMEMVHYGFAPHMFSVLALI 546
+ + M G +P +F+ LI
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLI 606
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 4/246 (1%)
Query: 43 DETTYNKLVLACCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQGQCDKAYKVF 98
D +YN L+ C++ R+ +AL I + + D T L++ G +KA +++
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
++ D+ + TY A++ +C+ A G+L + +P++ +N L+ C +
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G +++A L +EM + D ++ +I G ++ A + M G+ PD TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI L EA F +M+ G PD ++ Q + K L +++
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Query: 279 KGFLPD 284
K + D
Sbjct: 663 KDIVLD 668
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 13/216 (6%)
Query: 38 WKGLADET------TYNKLVLACCRDGRVEEALGILRGMAESDENT----YTSLIHLFCD 87
WK ++D TY ++ C+ G + A G+L M S+ Y L+ C
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 88 QGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS 147
+G D+A+++F EM P V ++N ++ + + A +L + G P+L +
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
++ L+ F G ++EA +M G D S++ ++G+ +K E+ ++V
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
K I+ D + ++ +C S DL + +LR
Sbjct: 662 DKDIVLDKELTCTVMDYMC---NSSANMDLAKRLLR 694
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/542 (24%), Positives = 247/542 (45%), Gaps = 67/542 (12%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
D T+N L+ C + R+ EAL + M E T + +A +F +M+
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVE------TGFL----------EAVALFDQMV 218
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+ G +P V T+N ++ C + R EA ++ ++ +G +++++ +V G C G +
Sbjct: 219 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 278
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
A LL +M + + D Y+++I C G A + +EM+ KGI P+ TY +I
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
C S+A L ++M+ R ++PD T+ L+SA + + +A L DEM+H+
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
PD VTYN++I+G C +R ++A + M ++ SPD V+++T+I +CR +
Sbjct: 399 PD--------TVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAK 446
Query: 343 ELGKAYKLKVEMDKKSI-----SWLGLWGLYDDIDK-SVMQGL-----SHEDTFSNLMSD 391
+ + +L E+ ++ + ++ L + ++D + Q L SH + +
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 392 YLAEGHLEKAYLLEREINYFDYLPVD------VHYSVFLNVLNKKARITEAKHHLLWFIS 445
L G E LE + F+ + + V Y++ ++ + K +++ EA
Sbjct: 507 ILLYGFCENEK-LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 446 HVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGA 505
H P Y+ +I GF + + A +M + ++PD +
Sbjct: 566 HGV--EPDVQTYNVMI---------------SGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 506 VYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNT 565
YN LI + G + K+ ++ EM GF+ F++ E +C V +I+N
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD----EEIIENY 664
Query: 566 LR 567
LR
Sbjct: 665 LR 666
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 160/333 (48%), Gaps = 36/333 (10%)
Query: 39 KGL-ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDK 93
KGL D TY +V C+ G + AL +L M E+ D Y+++I C G
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A +F+EM++ G +P+V TYN ++ +C R+ +A +LR +IER P++++FNAL+
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
+GK+ EAE+L EM + + D TY S+I+ FC + + A M M P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----P 430
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
D T+ +I C + + E L +E+ RRGL + TY L+ + + A L
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 274 DEMIHKGFLPDFVT---------------------------GISTSHVTYNAIIHGLCLL 306
EMI G PD +T I V YN IIHG+C
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 307 DRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
+ +EA ++ +P G+ PD +Y+ +I GFC
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/522 (23%), Positives = 221/522 (42%), Gaps = 67/522 (12%)
Query: 48 NKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMID 103
NK++ R R + A+ + R M + ++ LI FCD + + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEE 163
GF P V T+N ++ C + R EAL + ++E GF E
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL--------------------E 209
Query: 164 AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIG 223
A L +M + GL T+ +LI+ C +G+V +A + +MV KG+ D TYG ++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 224 SLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
+C A +L +M + PD Y+ ++ S A +L EM+ KG P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 284 DFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRE 343
+ T YN +I G C R +A +LR M E ++PD ++++ +I + +
Sbjct: 330 NVFT--------YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 344 LGKAYKLKVEMDKK-----SISWLGL-WGL-----YDDIDKSVMQGLSHED--TFSNLMS 390
L +A KL EM + ++++ + +G +DD K + ++ D TF+ ++
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA-KHMFDLMASPDVVTFNTIID 440
Query: 391 DYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISH-VCL 449
Y +++ L REI+ + Y+ ++ + + A+ ISH VC
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC- 499
Query: 450 RMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYN 508
P I + L+ C N + + + L + M + D YN
Sbjct: 500 --PDTITCNILLYGFCENEKLEEALELFEVIQMSKI----------------DLDTVAYN 541
Query: 509 LLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
++I C+ V +A+D++ + +G P + + +I C
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 195/476 (40%), Gaps = 67/476 (14%)
Query: 92 DKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
D A F M+ + + N ++ + R R A+ + R + R N+ SFN L
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL 147
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
++ FC K+ + ++ + G D T+ +L+H C + ++ +A + MV G
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
L EA LF +M+ GL+P T+ L++ L+ + +A
Sbjct: 208 L--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
L ++M+ KG D VTY I++G+C + + AL +L M E + PD V Y
Sbjct: 248 LVNKMVGKGLHIDV--------VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 332 STVIFGFCRIRELGKAYKLKVEMDKKSIS--------------WLGLWGLYDDIDKSVMQ 377
S +I C+ A L EM +K I+ G W + + +++
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 378 GLSHED--TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITE 435
+ D TF+ L+S + EG L +A L E+ + P V Y+ + K R +
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 436 AKHHLLWFISHVCLRMPTFIIYDTLIE-NCSNNEFKSVVGLVKGFGMRGLMKKAARAHDR 494
AKH S P + ++T+I+ C + L++ RGL+
Sbjct: 420 AKHMFDLMAS------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV--------- 464
Query: 495 MLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
+ YN LI C N++ A D++ EM+ +G P + L+ C
Sbjct: 465 -------ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 1 MKLLRVLFKTFLRNRVPPPDVMIRGF-------AAAWTETEKTNWKGLADETTYNKLVLA 53
M+LLR + + L + +I GF AA E + D T N L+
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 54 CCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPS 109
C + ++EEAL + + S D Y +IH C + D+A+ +F + G P
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 110 VATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
V TYN ++ +C +A + + + G EP+ ++N L++G G+++++ EL+
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 170 EMNQKGLALDDKTYTSLIHLFC 191
EM G + D T + C
Sbjct: 632 EMRSNGFSGDAFTIKMAEEIIC 653
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 131/322 (40%), Gaps = 44/322 (13%)
Query: 294 VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL-------GK 346
V N +I ++R + A+ + R M + + S++ +I FC +L GK
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 347 AYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMS--DYLAE-GHLEKAYL 403
KL + D + + L + GL ED S ++ Y+ E G LE L
Sbjct: 167 LTKLGFQPDVVTFNTL-------------LHGLCLEDRISEALALFGYMVETGFLEAVAL 213
Query: 404 LEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN 463
++ + PV + ++ +N L + R+ EA + + ++
Sbjct: 214 FDQMVE-IGLTPVVITFNTLINGLCLEGRVLEAA-----------------ALVNKMVGK 255
Query: 464 CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKA 523
+ + + +V G G K A +M E + KPD +Y+ +I C+ G+ A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 524 YDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLNEI 583
++ EM+ G AP++F+ +I+ C R++ ++++ + D L
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 584 DVREG---QTEYLRGELAERAM 602
V+EG + E L E+ R +
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCI 397
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 216/455 (47%), Gaps = 53/455 (11%)
Query: 62 EALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYC 121
E LGI D ++T LIH FC + A + +M+ GF PS+ T +++ +C
Sbjct: 106 ENLGI-----SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 122 RDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDK 181
+ RF+EA+ ++ + GF PN++ +N ++ G C + A E+ M +KG+ D
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220
Query: 182 TYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEM 241
TY +LI N G+ A + +MV + I P+ + LI + + L EA +L++EM
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 242 LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIH 301
+RR + P+ TY L++ + + A ++ D M+ KG PD VTYN +I
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV--------VTYNTLIT 332
Query: 302 GLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISW 361
G C R E+ +++ M GL DA +Y+T+I G+C+ +L A K+
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV----------- 381
Query: 362 LGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLA-EGHLEKAYLLEREINYFDYLPVD-VH 419
++ V G+S + N++ D L G +EKA ++ ++ + + VD +
Sbjct: 382 ---------FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE-MDVDIIT 431
Query: 420 YSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGF 479
Y++ + L + ++ EA W CL + +L + + + ++ G
Sbjct: 432 YNIIIQGLCRTDKLKEA-----W-----CL-------FRSLTRKGVKPDAIAYITMISGL 474
Query: 480 GMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDH 514
+GL ++A + RM E + P +Y+ + DH
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 149/298 (50%), Gaps = 12/298 (4%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
YN ++ C++ + AL + M + +D TY +LI + G+ A ++ +M+
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
P+V + A++ + ++ EA + + +I R PN+ ++N+L+ GFC G +
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
+A+ + M KG D TY +LI FC +VE ++ EM ++G++ DA TY LI
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
C L+ A +F M+ G+SPD TY L+ + KA + +++
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
D +TYN II GLC D+ +EA + R + G+ PDA++Y T+I G CR
Sbjct: 427 VDI--------ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 145/298 (48%), Gaps = 13/298 (4%)
Query: 39 KGL-ADETTYNKLVLACCRDGRVEEALGILRGMAES--DENT--YTSLIHLFCDQGQCDK 93
KG+ AD TYN L+ GR +A +LR M + D N +T+LI F +G +
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A ++ EMI P+V TYN+++ +C +A + ++ +G P+++++N L+
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
GFC ++E+ +L EM +GL D TY +LIH +C GK+ A ++ MV G+ P
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
D TY L+ LC + +A + +++ + + D TY ++ + +A+ L
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
+ KG PD + Y +I GLC EA ++ R M E G P Y
Sbjct: 453 RSLTRKGVKPD--------AIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 165/392 (42%), Gaps = 46/392 (11%)
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
K ++A L EM Q +T ++ + K + + +M + GI D ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
LI C LS A L +M++ G P T L++ + +F +A L D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
GF+P+ V YN +I+GLC ALE+ M + G+ DAV+Y+T+I G
Sbjct: 179 GFVPNVVI--------YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 340 RIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLE 399
A +L +M K+ I D +V+ F+ L+ ++ EG+L
Sbjct: 231 NSGRWTDAARLLRDMVKRKI------------DPNVI-------FFTALIDTFVKEGNLL 271
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
+A L +E+ +P Y+ +N + +AK+ +S C P + Y+T
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF--PDVVTYNT 329
Query: 460 LIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCG 518
LI C + + + L +GL+ D YN LI +C+ G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVG----------------DAFTYNTLIHGYCQAG 373
Query: 519 NVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
++ A ++ MV G +P + + L++ LC
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC 405
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 180/462 (38%), Gaps = 85/462 (18%)
Query: 125 RFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYT 184
+F +A + +++ P+++ F ++ K + L +M G++ D ++T
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 185 SLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRR 244
LIH FC ++ A + +M+ G P T G L+ C EA L
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLV------ 172
Query: 245 GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLC 304
D M GF+P+ V YN +I+GLC
Sbjct: 173 -----------------------------DSMDGFGFVPNVV--------IYNTVINGLC 195
Query: 305 LLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGL 364
ALE+ M + G+ DAV+Y+T+I G A +L +M K+
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK------ 249
Query: 365 WGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFL 424
ID +V+ + DTF + EG+L +A L +E+ +P Y+ +
Sbjct: 250 ------IDPNVIFFTALIDTF-------VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 425 NVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNE------------FKS 471
N + +AK+ +S C P + Y+TLI C + ++
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCF--PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 472 VVG-------LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAY 524
+VG L+ G+ G + A + +RM++ PD YN+L+ C G + KA
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 525 DMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTL 566
M ++ + + +I+ LC + K +W + +L
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKL-KEAWCLFRSL 455
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 140/556 (25%), Positives = 243/556 (43%), Gaps = 43/556 (7%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
+E T+ LV C+ G ++ L +L M ++ Y +++ FC +G+ D + K+
Sbjct: 181 NEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMV 240
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGF----EPNLISFNALVQG 154
+M + G P + T+N+ + A C++ + +A I + + PN I++N +++G
Sbjct: 241 EKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKG 300
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
FC G +E+A+ L + + + ++Y + GK +A + +M KGI P
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPS 360
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
+Y L+ LC LS+A + M R G+ PD TY L+ Y + A L
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ 420
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
EM+ LP+ T N ++H L + R EA E+LR M E G D V+ + +
Sbjct: 421 EMMRNNCLPN--------AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 335 IFGFCRIRELGKAYKLKVEMDKKSISWLG-----LWGLYDD--IDKSVMQGLSHEDTFSN 387
+ G C EL KA ++ M + LG GL DD I+ + + L T+S
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI---TYST 529
Query: 388 LMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHV 447
L++ G +A L E+ P V Y++F++ K+ +I+ A
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA----------- 578
Query: 448 CLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVY 507
F + + + + ++ L+ G G++ + + D M E P+ Y
Sbjct: 579 ------FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 508 NLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLR 567
N I C V A ++ EM+ AP++FS LIEA C V ++ V + +
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS 692
Query: 568 SCNLNDSELLQVLNEI 583
C + + NE+
Sbjct: 693 ICGQKEGLYSLMFNEL 708
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/568 (23%), Positives = 245/568 (43%), Gaps = 80/568 (14%)
Query: 33 TEKTNWKGLA-DETTYNKLVLACCRDGRVEEALGILR--------GMAESDENTYTSLIH 83
EK +GL D T+N + A C++G+V +A I G+ + TY ++
Sbjct: 240 VEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLK 299
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
FC G + A +F + + S+ +YN + R +F EA +L+ + ++G P
Sbjct: 300 GFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP 359
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
++ S+N L+ G C G + +A+ ++ M + G+ D TY L+H +C+ GKV+ A +
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQ 263
EM+ LP+A T L+ SL +SEA +L ++M +G D T ++
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGS 479
Query: 264 AQFSKAFHL-----------------------QDEMIHKGFLPDFVTGISTSHVTYNAII 300
+ KA + D +I LPD +TY+ ++
Sbjct: 480 GELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL--------ITYSTLL 531
Query: 301 HGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS-- 358
+GLC R EA + M L PD+V+Y+ I FC+ ++ A+++ +M+KK
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCH 591
Query: 359 ---------ISWLG----LWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLE 405
I LG ++ ++ +D+ +G+S N YL EG EK +E
Sbjct: 592 KSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG--EK---VE 646
Query: 406 REINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFI----IYDTLI 461
N D + + ++ NV + K + I C ++P F +++T +
Sbjct: 647 DATNLLDEM---MQKNIAPNVFSFK-----------YLIEAFC-KVPDFDMAQEVFETAV 691
Query: 462 ENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVH 521
C E + + G + KA + +L+ ++ +Y L+ C+ +
Sbjct: 692 SICGQKEGLYSL-MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELE 750
Query: 522 KAYDMYMEMVHYGFAPHMFSVLALIEAL 549
A + +M+ G+ +++ +I+ L
Sbjct: 751 VASGILHKMIDRGYGFDPAALMPVIDGL 778
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/519 (22%), Positives = 216/519 (41%), Gaps = 76/519 (14%)
Query: 80 SLIHLFCDQGQCDKAYKVFAEMIDTGF---SPSVATYNAIVLAYCRDKRFREALGILRCL 136
S++ +F DKA+ F +++ + F PSV YN ++ + +++R + + +
Sbjct: 80 SVVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDM 138
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+ G P +FN L++ C ++ A EL EM +KG ++ T+ L+ +C G
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+K E+ M G+LP+ Y ++ S C + ++ + ++M GL PD T+
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSR 258
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLC---LLDRAE--- 310
+SA + + A + +M L +++ + +TYN ++ G C LL+ A+
Sbjct: 259 ISALCKEGKVLDASRIFSDM----ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314
Query: 311 -----------------------------EALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
EA +L+ M + G+ P SY+ ++ G C++
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKL 374
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
L A + M + + + T+ L+ Y + G ++ A
Sbjct: 375 GMLSDAKTIVGLMKRNGVCPDAV-------------------TYGCLLHGYCSVGKVDAA 415
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTF---IIYD 458
L +E+ + LP ++ L+ L K RI+EA+ LL ++ + T II D
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE-ELLRKMNEKGYGLDTVTCNIIVD 474
Query: 459 TLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAH-------DRMLEGNYKPDGAVYNLLI 511
L C + E + +VKG + G + D ++E N PD Y+ L+
Sbjct: 475 GL---CGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 512 FDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
C+ G +A +++ EM+ P + I C
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC 570
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 100/275 (36%), Gaps = 73/275 (26%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYK 96
L D TY+ L+ C+ GR EA + M + D Y IH FC QG+ A++
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 97 VFA-----------------------------------EMIDTGFSPSVATYNAIVLAYC 121
V EM + G SP++ TYN + C
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 122 RDKRFREALGILRCLIERGFEPNLISFNALVQGFC------------------------- 156
++ +A +L ++++ PN+ SF L++ FC
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL 700
Query: 157 ---------GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
G++ +A ELL+ + +G L Y L+ C K ++E A + +M+
Sbjct: 701 YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMI 760
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
+G D P+I L EA +M+
Sbjct: 761 DRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 211/439 (48%), Gaps = 51/439 (11%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
+ +Y+ L+ C GR+EEA G+ M E TYT LI CD+G DKA+ +F
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EMI G P+V TY ++ CRD + EA G+ R +++ P++I++NAL+ G+C
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G++ A ELL M ++ + +T+ L+ C GK KA + M+ G+ PD +Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI LC + ++ A+ L M + PD T+T +++A+ Q + A M+
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 279 KGFLPDFVTG---------------------------ISTSHVTYNAIIHGLCLLDRAEE 311
KG D VTG I T+ + N I+ L + +E
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS------------I 359
L +L + ++GL P V+Y+T++ G R ++ ++++ +E+ K S I
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI-LELMKLSGCLPNVYPYTIII 623
Query: 360 SWLGLWGLYDDIDK--SVMQ--GLS-HEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYL 414
+ L +G ++ +K S MQ G+S + T++ ++ Y+ G L++A R + Y
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYE 683
Query: 415 PVDVHYSVFLN--VLNKKA 431
D YS L VL++K
Sbjct: 684 LNDRIYSSLLQGFVLSQKG 702
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 224/508 (44%), Gaps = 51/508 (10%)
Query: 47 YNKLVLACCRDGRVEEA----LGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
Y +V A C++G E A IL+ D + TSL+ FC A KVF M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 103 -DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ +P+ +Y+ ++ C R EA G+ + E+G +P+ ++ L++ C +G +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
++A L EM +G + TYT LI C GK+E+A + +MV I P TY L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I C + AF+L M +R P+ +T+ LM + KA HL M+ G
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
PD V+YN +I GLC A ++L M + PD ++++ +I FC+
Sbjct: 438 SPDI--------VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK- 488
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLS-HEDTFSNLMSDYLAEGHLEK 400
GKA D S ++LGL + +G+S E T + L+ G
Sbjct: 489 --QGKA-------DVAS-AFLGLM---------LRKGISLDEVTGTTLIDGVCKVGKTRD 529
Query: 401 AYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTL 460
A + + L +V L++L+K ++ E + +L I+ + L +P+ + Y TL
Sbjct: 530 ALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE-ELAMLGKINKLGL-VPSVVTYTTL 587
Query: 461 IENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNV 520
++ GL++ + G + R + M P+ Y ++I C+ G V
Sbjct: 588 VD-----------GLIRSGDITG----SFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 521 HKAYDMYMEMVHYGFAPHMFSVLALIEA 548
+A + M G +P+ + +++
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 135/334 (40%), Gaps = 45/334 (13%)
Query: 218 YGPLIGSLCLQQTLSEAFDLF-QEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
Y ++ +LC + +EA ++F ++L+ G D+ T L+ F + +L+D +
Sbjct: 198 YRTIVNALC-KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG------FCRGLNLRDAL 250
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
+ VT S V+Y+ +IHGLC + R EEA + M E G P +Y+ +I
Sbjct: 251 KVFDVMSKEVTCAPNS-VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 337 GFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEG 396
C + KA+ L EM + + T++ L+ +G
Sbjct: 310 ALCDRGLIDKAFNLFDEMIPRGCK-------------------PNVHTYTVLIDGLCRDG 350
Query: 397 HLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFII 456
+E+A + R++ P + Y+ +N K R+ A L C P
Sbjct: 351 KIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC--KPNVRT 408
Query: 457 YDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCR 516
++ L+E G G KA RML+ PD YN+LI CR
Sbjct: 409 FNELME---------------GLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 517 CGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
G+++ AY + M + P + A+I A C
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 135/336 (40%), Gaps = 67/336 (19%)
Query: 39 KGLA-DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDK 93
KG++ DE T L+ C+ G+ +AL IL + + + ++ ++ + + +
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
+ ++ G PSV TY +V R + IL + G PN+ + ++
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIIN 624
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKG--- 210
G C G++EEAE+LL M G++ + TYT ++ + N GK+++A E MV +G
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 211 ------------------------------------------ILPDADTYGPLIGSLCL- 227
++ + G I LC+
Sbjct: 685 NDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF 744
Query: 228 -------QQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
+ E+ DL Q +L RG+ + K +M +Y + + +K L ++ G
Sbjct: 745 LVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSG 803
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
F+P F ++ +I GL AE A E++
Sbjct: 804 FVPSF--------KSFCLVIQGLKKEGDAERARELV 831
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 110/279 (39%), Gaps = 35/279 (12%)
Query: 288 GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA 347
G + Y I++ LC E A + + +IG D+ ++++ GFCR L A
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDA 249
Query: 348 YKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLERE 407
K+ +D + K V + ++S L+ G LE+A+ L+ +
Sbjct: 250 LKV-----------------FDVMSKEVTCA-PNSVSYSILIHGLCEVGRLEEAFGLKDQ 291
Query: 408 INYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNN 467
+ P Y+V + L + I +A F ++D +I
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKA-----------------FNLFDEMIPRGCKP 334
Query: 468 EFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMY 527
+ L+ G G +++A +M++ P YN LI +C+ G V A+++
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL 394
Query: 528 MEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTL 566
M P++ + L+E LC V + K +++ L
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 35/265 (13%)
Query: 286 VTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELG 345
V G ++ Y++++ L LD A R M G + Y T++ C+
Sbjct: 153 VFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK----- 207
Query: 346 KAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLE 405
Y EM I +G + L I S++ G + + + ++
Sbjct: 208 NGYTEAAEMFMSKILKIG-FVLDSHIGTSLLLGFCRGLNLRDALKVF---------DVMS 257
Query: 406 REINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCS 465
+E+ P V YS+ ++ L + R+ EA F + D + E
Sbjct: 258 KEVT---CAPNSVSYSILIHGLCEVGRLEEA-----------------FGLKDQMGEKGC 297
Query: 466 NNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYD 525
++ L+K RGL+ KA D M+ KP+ Y +LI CR G + +A
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 526 MYMEMVHYGFAPHMFSVLALIEALC 550
+ +MV P + + ALI C
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYC 382
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 191/413 (46%), Gaps = 56/413 (13%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
+ D ++Y +V+ C RDG+++EA L GM
Sbjct: 214 VPDSSSYKLMVIGCFRDGKIQEADRWLTGM------------------------------ 243
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
I GF P AT I+ A C + A+ R +I+ GF+PNLI+F +L+ G C KG
Sbjct: 244 -IQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL-PDADTYG 219
+++A E+L+EM + G + T+T+LI C +G EKAF + ++V P+ TY
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
+IG C + L+ A LF M +GL P+ TYT L++ + F +A+ L + M +
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
GF+P+ TYNA I LC RA EA E+L GL D V+Y+ +I C
Sbjct: 423 GFMPNI--------YTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474
Query: 340 RIRELGKAYKLKVEMDKKSIS--------WLGLWGLYDDIDKS-------VMQGL-SHED 383
+ ++ +A M+K + + + +S V GL ++
Sbjct: 475 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 534
Query: 384 TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
T+++++S Y EG ++ A + +P Y ++ L KK+ + EA
Sbjct: 535 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 156/331 (47%), Gaps = 15/331 (4%)
Query: 32 ETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDE-----NTYTSLIHLFC 86
E + WK + T+ L+ C+ G E+A + + SD +TYTS+I +C
Sbjct: 312 EMVRNGWK--PNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC 369
Query: 87 DQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLI 146
+ + ++A +F+ M + G P+V TY ++ +C+ F A ++ + + GF PN+
Sbjct: 370 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY 429
Query: 147 SFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEM 206
++NA + C K + EA ELL + GL D TYT LI C + + +A M
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM 489
Query: 207 VHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF 266
G D LI + C Q+ + E+ LFQ ++ GL P +TYT ++S Y +
Sbjct: 490 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI 549
Query: 267 SKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSP 326
A M G +PD TY ++I GLC +EA ++ M + GLSP
Sbjct: 550 DLALKYFHNMKRHGCVPD--------SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Query: 327 DAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
V+ T+ + +C+ + A L +DKK
Sbjct: 602 PEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 196/447 (43%), Gaps = 50/447 (11%)
Query: 125 RFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYT 184
R EA+G++ + +G P+ I+ N +++ G +E AE + EM+ +G+ D +Y
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221
Query: 185 SLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRR 244
++ GK+++A M+ +G +PD T ++ +LC ++ A F++M+
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281
Query: 245 GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLC 304
G P+ +T L+ + +AF + +EM+ G+ P+ T+ A+I GLC
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV--------YTHTALIDGLC 333
Query: 305 LLDRAEEALEI-LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLG 363
E+A + L+ + P+ +Y+++I G+C+ +L +A L M ++
Sbjct: 334 KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ------ 387
Query: 364 LWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVF 423
GL+ ++ +T++ L++ + G +AY L + ++P Y+
Sbjct: 388 --GLFPNV-----------NTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 434
Query: 424 LNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLI-ENCSNNEFKSVVG-------- 474
++ L KK+R EA L S C + Y LI E C N+ +
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFS--CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 475 -----------LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKA 523
L+ F + MK++ R ++ P Y +I +C+ G++ A
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 524 YDMYMEMVHYGFAPHMFSVLALIEALC 550
+ M +G P F+ +LI LC
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSLISGLC 579
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 36/250 (14%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN + + C+ R EA +L E+D TYT LI C Q ++A F M
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM 489
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
TGF + N ++ A+CR K+ +E+ + + ++ G P ++ +++ +C +G +
Sbjct: 490 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI 549
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA------ 215
+ A + M + G D TY SLI C K V++A ++ M+ +G+ P
Sbjct: 550 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609
Query: 216 --------------------------DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPD 249
T L+ LC ++ + A FQ++L + S D
Sbjct: 610 AYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSAD 669
Query: 250 NKTYTGLMSA 259
T +A
Sbjct: 670 RVTLAAFTTA 679
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 150/287 (52%), Gaps = 8/287 (2%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D ++T LIH FC + A V +M+ G+ PS+ T+ +++ +C R +A ++
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+++ G+EPN++ +N L+ G C G++ A ELL EM +KGL D TY +L+ C
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
G+ A M +M+ + I PD T+ LI Q L EA +L++EM++ + P+N TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
+++ + + A D M KG P+ VTYN +I G C +E +
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNV--------VTYNTLISGFCKFRMVDEGM 336
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
++ + M G + D +Y+T+I G+C++ +L A + M + ++
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT 383
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 48/307 (15%)
Query: 39 KGL-ADETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDK 93
KGL AD TYN L+ C GR +A +LR M + N T+T+LI +F QG D+
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A +++ EMI + P+ TYN+I+ C R +A + +G PN++++N L+
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
GFC ++E +L Q M+ +G D TY +LIH +C GK+ A ++ MV + + P
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
D T+ L+ LC+ + A F +M +++ Y G+
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDM------RESEKYIGI----------------- 421
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
V YN +IHGLC D+ E+A E+ +P G+ PDA +Y+
Sbjct: 422 --------------------VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 334 VIFGFCR 340
+I G C+
Sbjct: 462 MILGLCK 468
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 196/443 (44%), Gaps = 60/443 (13%)
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
G S + ++ ++ +CR R AL +L +++ G+EP++++F +L+ GFC ++ +A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
L+ M + G + Y +LI C G++ A E+ EM KG+ D TY L+
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
LC S+A + ++M++R ++PD T+T L+ + Q +A L EMI P+
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL 344
+VTYN+II+GLC+ R +A + M G P+ V+Y+T+I GFC+ R +
Sbjct: 281 --------NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV 332
Query: 345 GKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA--- 401
+ KL M + G DI T++ L+ Y G L A
Sbjct: 333 DEGMKLFQRMSCE--------GFNADI-----------FTYNTLIHGYCQVGKLRVALDI 373
Query: 402 --YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
+++ R + P + + + L+ L I A + +D
Sbjct: 374 FCWMVSRRVT-----PDIITHCILLHGLCVNGEIESA-----------------LVKFDD 411
Query: 460 LIENCSNNEFKSVVG---LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCR 516
+ E + ++ +V ++ G ++KA R+ KPD Y ++I C+
Sbjct: 412 MRE---SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 517 CGNVHKAYDMYMEMVHYGFAPHM 539
G +A ++ M G M
Sbjct: 469 NGPRREADELIRRMKEEGIICQM 491
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/504 (22%), Positives = 205/504 (40%), Gaps = 60/504 (11%)
Query: 66 ILRGMAESDENTYTSLIHL-FCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDK 124
I+ G+A S + +++ G +A+ + E + TGF S+
Sbjct: 5 IVTGIATSTAKGFRRVVNPNLLGGGAAARAFSDYREKLRTGFLHSI-------------- 50
Query: 125 RFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYT 184
RF +A + ++ P+++ F L+ + E Q+M G++ D ++T
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 185 SLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRR 244
LIH FC ++ A + +M+ G P T+G L+ CL + +AF L M++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 245 GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLC 304
G P+ Y L+ + + A L +EM KG D VTYN ++ GLC
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV--------VTYNTLLTGLC 222
Query: 305 LLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS------ 358
R +A +LR M + ++PD V+++ +I F + L +A +L EM + S
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 359 -----ISWLGLWG-LYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFD 412
I+ L + G LYD K ++ + F N+++ K +++ + F
Sbjct: 283 TYNSIINGLCMHGRLYD--AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 413 YLPVD------VHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSN 466
+ + Y+ ++ + ++ A W +S + +I +C
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR--------VTPDIITHCI- 391
Query: 467 NEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDM 526
L+ G + G ++ A D M E YN++I C+ V KA+++
Sbjct: 392 --------LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWEL 443
Query: 527 YMEMVHYGFAPHMFSVLALIEALC 550
+ + G P + +I LC
Sbjct: 444 FCRLPVEGVKPDARTYTIMILGLC 467
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 153/363 (42%), Gaps = 44/363 (12%)
Query: 190 FCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPD 249
F + + E AF + EMVH LP + L+ + + Q+M G+S D
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 250 NKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRA 309
++T L+ + ++ S A + +M+ G+ P S VT+ +++HG CL++R
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEP--------SIVTFGSLLHGFCLVNRI 157
Query: 310 EEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYD 369
+A ++ M + G P+ V Y+T+I G C+ EL A +L EM+KK GL
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK--------GLGA 209
Query: 370 DIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNK 429
D+ T++ L++ G A + R++ P V ++ ++V K
Sbjct: 210 DVV-----------TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 430 KARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAA 489
+ + EA+ +Y +I++ + + ++ G M G + A
Sbjct: 259 QGNLDEAQE-----------------LYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 490 RAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+ D M P+ YN LI C+ V + ++ M GF +F+ LI
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Query: 550 CCV 552
C V
Sbjct: 362 CQV 364
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 39/209 (18%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
+ TYN ++ C GR+ +A MA + TY +LI FC D+ K+F
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS----------- 147
M GF+ + TYN ++ YC+ + R AL I ++ R P++I+
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 148 ------------------------FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTY 183
+N ++ G C K+E+A EL + +G+ D +TY
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGIL 212
T +I C G +A E+ M +GI+
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGII 488
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 157/314 (50%), Gaps = 15/314 (4%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
TYN LV GR+E A I+ M + D TY ++ C++G +A +V E
Sbjct: 261 VTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLRE 317
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M + G P +YN ++ + A ++++G P ++N L+ G + K
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK 377
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+E AE L++E+ +KG+ LD TY LI+ +C G +KAF + EM+ GI P TY
Sbjct: 378 IEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTS 437
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
LI LC + EA +LF++++ +G+ PD LM + +AF L EM
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
PD VTYN ++ GLC + EEA E++ M G+ PD +SY+T+I G+ +
Sbjct: 498 INPD--------DVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 549
Query: 341 IRELGKAYKLKVEM 354
+ A+ ++ EM
Sbjct: 550 KGDTKHAFMVRDEM 563
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 223/485 (45%), Gaps = 44/485 (9%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
L+ C D+A + F M + GF P T N I+ R R A +
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME 220
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
+ N+ +FN ++ C +GK+++A+ L M G+ TY +L+ F +G++E A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
+ +EM KG PD TY P++ +C + SE + +EM GL PD+ +Y L+
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGC 337
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
AF +DEM+ +G +P F TYN +IHGL + ++ E A ++R +
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTF--------YTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 321 EIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI-----SWLGLWGLY------- 368
E G+ D+V+Y+ +I G+C+ + KA+ L EM I ++ L +
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Query: 369 --DDI-DKSVMQGLSHEDTFSN-LMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFL 424
D++ +K V +G+ + N LM + A G++++A+ L +E++ P DV Y+ +
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 425 NVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGL 484
L + + EA+ L+ + ++ P I Y+TLI G+ +G
Sbjct: 510 RGLCGEGKFEEAR-ELMGEMKRRGIK-PDHISYNTLI---------------SGYSKKGD 552
Query: 485 MKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLA 544
K A D ML + P YN L+ + A ++ EM G P+ S +
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCS 612
Query: 545 LIEAL 549
+IEA+
Sbjct: 613 VIEAM 617
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 207/459 (45%), Gaps = 67/459 (14%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
++ LV CC+ V+EA+ M E T ++ L + + A+ +A+M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+V T+N ++ C++ + ++A G L + G +P ++++N LVQGF +G++E
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK--------------------------- 195
A ++ EM KG D +TY ++ CN+G+
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 196 -----VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDN 250
+E AF + EMV +G++P TY LI L ++ + A L +E+ +G+ D+
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 251 KTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAE 310
TY L++ Y KAF L DEM+ G P + TY ++I+ LC ++
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQP--------TQFTYTSLIYVLCRKNKTR 449
Query: 311 EALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDD 370
EA E+ + G+ PD V +T++ G C I + +A+ L EMD SI+ DD
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINP-------DD 502
Query: 371 IDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKK 430
+ T++ LM EG E+A L E+ P + Y+ ++ +KK
Sbjct: 503 V------------TYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 431 ARITEAKHHLLWFISHVCLRM-PTFIIYDTLIENCSNNE 468
+ KH + + L PT + Y+ L++ S N+
Sbjct: 551 G---DTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 149/300 (49%), Gaps = 14/300 (4%)
Query: 41 LADETTYNKLVLACCRDGRVEEALG-----ILRGMAESDENTYTSLIHLFCDQGQCDKAY 95
+ D +YN L+ C +G +E A + +GM + TY +LIH + + + A
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFY-TYNTLIHGLFMENKIEAAE 382
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
+ E+ + G TYN ++ YC+ ++A + ++ G +P ++ +L+
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
C K K EA+EL +++ KG+ D +L+ C G +++AF + EM I PD
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
TY L+ LC + EA +L EM RRG+ PD+ +Y L+S Y + AF ++DE
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDE 562
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
M+ GF P +TYNA++ GL E A E+LR M G+ P+ S+ +VI
Sbjct: 563 MLSLGFNPTL--------LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 130/254 (51%), Gaps = 15/254 (5%)
Query: 11 FLRNRVPPPDVMIRGFAAAWTETEKTNWKGLA-DETTYNKLVLACCRDGRVEEALGILRG 69
F+ N++ +++IR + KG+ D TYN L+ C+ G ++A +
Sbjct: 373 FMENKIEAAEILIR----------EIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDE 422
Query: 70 MA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKR 125
M + + TYTSLI++ C + + +A ++F +++ G P + N ++ +C
Sbjct: 423 MMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGN 482
Query: 126 FREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTS 185
A +L+ + P+ +++N L++G CG+GK EEA EL+ EM ++G+ D +Y +
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 186 LIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
LI + KG + AF ++ EM+ G P TY L+ L Q A +L +EM G
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602
Query: 246 LSPDNKTYTGLMSA 259
+ P++ ++ ++ A
Sbjct: 603 IVPNDSSFCSVIEA 616
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 189/447 (42%), Gaps = 63/447 (14%)
Query: 146 ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE 205
I F+ LV+ C ++EA E M +KG +T ++ L ++E A+ A+
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQ 265
M I + T+ +I LC + L +A M G+ P TY L+ + L+ +
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 266 FSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLS 325
A + EM KGF PD TYN I+ +C RA E+LR M EIGL
Sbjct: 276 IEGARLIISEMKSKGFQPDM--------QTYNPILSWMCNEGRAS---EVLREMKEIGLV 324
Query: 326 PDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED-- 383
PD+VSY+ +I G +L A+ + EM K+ + + + Y+ +++ GL E+
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGM--VPTFYTYN----TLIHGLFMENKI 378
Query: 384 --------------------TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVF 423
T++ L++ Y G +KA+ L E+ P Y+
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438
Query: 424 LNVLNKKARITEAKHHLLWFISHVCLRM-PTFIIYDTLIE-NCSNNEFKSVVGLVKGFG- 480
+ VL +K + EA F V M P ++ +TL++ +C+ L+K
Sbjct: 439 IYVLCRKNKTREADE---LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDM 495
Query: 481 -------------MRGLMKKAARAHDRMLEGN-----YKPDGAVYNLLIFDHCRCGNVHK 522
MRGL + R L G KPD YN LI + + G+
Sbjct: 496 MSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKH 555
Query: 523 AYDMYMEMVHYGFAPHMFSVLALIEAL 549
A+ + EM+ GF P + + AL++ L
Sbjct: 556 AFMVRDEMLSLGFNPTLLTYNALLKGL 582
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 5/164 (3%)
Query: 34 EKTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQ 88
EK KG+ D N L+ C G ++ A +L+ M D+ TY L+ C +
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 89 GQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISF 148
G+ ++A ++ EM G P +YN ++ Y + + A + ++ GF P L+++
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 149 NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCN 192
NAL++G + E AEELL+EM +G+ +D ++ S+I N
Sbjct: 576 NALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 143/554 (25%), Positives = 248/554 (44%), Gaps = 62/554 (11%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAE 100
TYN L+ G VE +LR M+E + TYTSLI +C +G ++A VF
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
+ + Y ++ YCR + R+A+ + +IE G N N+L+ G+C G+
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+ EAE++ MN L D TY +L+ +C G V++A ++ +M K ++P TY
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
L+ + L++ ML+RG++ D + + L+ A F++A L + ++ +G
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
L D +T N +I GLC +++ EA EIL + P +Y + G+ +
Sbjct: 502 LLTD--------TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYK 553
Query: 341 IRELGKAYKLKVEMDKKSI---------------SWLGLWGLYDDIDKSVMQGLSHE-DT 384
+ L +A+ +K M++K I + L + D + + +GL+ T
Sbjct: 554 VGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVAT 613
Query: 385 FSNLMSDYLAEGHLEKAY-----LLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHH 439
+ L++ + G ++KAY ++E+ I L V++ S N L + +I EA
Sbjct: 614 YGALITGWCNIGMIDKAYATCFEMIEKGIT----LNVNI-CSKIANSLFRLDKIDEA-CL 667
Query: 440 LLWFISHVCLRMP--------------TFIIYDTLIENCSNNEFKSVV---GLVKGFGMR 482
LL I L +P T + + E+ N+ K ++ +V +
Sbjct: 668 LLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIA 727
Query: 483 GLMKKAARAHDRML------EGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFA 536
GL K R L + PD Y +LI G+++KA+ + EM G
Sbjct: 728 GLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGII 787
Query: 537 PHMFSVLALIEALC 550
P++ + ALI+ LC
Sbjct: 788 PNIVTYNALIKGLC 801
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 193/470 (41%), Gaps = 57/470 (12%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDT--GFSPSVATYNAIVLAYCRDKRFREALG 131
D T + +++ +C G DKA VFA+ ++ G +V TYN+++ Y
Sbjct: 224 DVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTR 282
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+LR + ERG N++++ +L++G+C KG MEEAE + + + +K L D Y L+ +C
Sbjct: 283 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 342
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
G++ A + M+ G+ + LI C L EA +F M L PD+
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
TY L+ Y +A L D+M K +P + +TYN ++ G + +
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP--------TVMTYNILLKGYSRIGAFHD 454
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDI 371
L + + M + G++ D +S ST++ ++ + +A KL W
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL----------W---------- 494
Query: 372 DKSVMQGLSHEDTFSNLMSDYLAE-GHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKK 430
+ + +GL + N+M L + + +A + +N F P Y + K
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554
Query: 431 ARITEAKHHLLWFISHVCLR---MPTFIIYDTLIENC-SNNEFKSVVGLVKGFGMRGLMK 486
+ EA + + R PT +Y+TLI V LV RGL
Sbjct: 555 GNLKEA-----FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGL-- 607
Query: 487 KAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFA 536
P A Y LI C G + KAY EM+ G
Sbjct: 608 --------------TPTVATYGALITGWCNIGMIDKAYATCFEMIEKGIT 643
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/509 (22%), Positives = 216/509 (42%), Gaps = 54/509 (10%)
Query: 37 NWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCD 92
+W D TYN LV CR G V+EAL + M + + TY L+ + G
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 93 KAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALV 152
++ M+ G + + + ++ A + F EA+ + ++ RG + I+ N ++
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 153 QGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL 212
G C K+ EA+E+L +N +TY +L H + G +++AF +K M KGI
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Query: 213 PDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHL 272
P + Y LI + L++ DL E+ RGL+P TY L++ + KA+
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 273 QDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYS 332
EMI K GI+ + + I + L LD+ +EA +L+ + V +
Sbjct: 634 CFEMIEK--------GITLNVNICSKIANSLFRLDKIDEACLLLQKI---------VDFD 676
Query: 333 TVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGL--SHEDTFSNLMS 390
++ G+ ++E ++ + + L + + ++ S + L + ++ ++
Sbjct: 677 LLLPGYQSLKEF---------LEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIA 727
Query: 391 DYLAEGHLEKAYLLEREINYFD-YLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCL 449
G LE A L ++ D ++P + Y++ ++ I +A + L
Sbjct: 728 GLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA----FTLRDEMAL 783
Query: 450 R--MPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVY 507
+ +P + Y+ LI KG G + +A R ++ + P+ Y
Sbjct: 784 KGIIPNIVTYNALI---------------KGLCKLGNVDRAQRLLHKLPQKGITPNAITY 828
Query: 508 NLLIFDHCRCGNVHKAYDMYMEMVHYGFA 536
N LI + GNV +A + +M+ G
Sbjct: 829 NTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 205/488 (42%), Gaps = 53/488 (10%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
+ ++ ++ ++G A VF M + G PS+ + N+++ R AL + +
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK-GLALDDKTYTSLIHLFCNKGK 195
I P++ + + +V +C G +++A +E GL L+ TY SLI+ + G
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
VE + M +G+ + TY LI C + + EA +F+ + + L D Y
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
LM Y Q A + D MI G+ T+ N++I+G C + EA +I
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIE--------IGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM-DKKSISWLGLWGLYDDIDKS 374
M + L PD +Y+T++ G+CR + +A KL +M K+ + + + +
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI------- 441
Query: 375 VMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARIT 434
+++G S F +++S + +L+R +N ++ S L L K
Sbjct: 442 LLKGYSRIGAFHDVLSLW--------KMMLKRGVN-----ADEISCSTLLEALFKLGDFN 488
Query: 435 EAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDR 494
EA LW +V R ++ DT+ N + GL K M+K A +
Sbjct: 489 EAMK--LW--ENVLAR---GLLTDTITLNVM------ISGLCK-------MEKVNEAKEI 528
Query: 495 MLEGNY---KPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCC 551
+ N KP Y L + + GN+ +A+ + M G P + LI
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 552 VRRYNKMS 559
R NK++
Sbjct: 589 YRHLNKVA 596
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 70 MAESDENT------------YTSLIHLFCDQGQCDKAYKVFAEMIDTG-FSPSVATYNAI 116
+AES EN+ Y I C G+ + A K+F++++ + F P TY +
Sbjct: 702 IAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTIL 761
Query: 117 VLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGL 176
+ +A + + +G PN++++NAL++G C G ++ A+ LL ++ QKG+
Sbjct: 762 IHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGI 821
Query: 177 ALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ TY +LI G V +A +K +M+ KG++ +D G
Sbjct: 822 TPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQG 864
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 113/520 (21%), Positives = 201/520 (38%), Gaps = 94/520 (18%)
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
+VF E FSP+V ++ I+ Y + AL + + G P+L+S N+L+
Sbjct: 146 RVFKEF---SFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE---------- 205
KG+ A + +M ++ D T + +++ +C G V+KA E
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 206 --------------------------MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQ 239
M +G+ + TY LI C + + EA +F+
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
+ + L D Y LM Y Q A + D MI G+ T+ N++
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE--------IGVRTNTTICNSL 372
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
I+G C + EA +I M + L PD +Y+T++ G+CR + +A KL +M +K +
Sbjct: 373 INGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Query: 360 ---------------------SWLGLWGLYDDIDKSVMQGLSHED-TFSNLMSDYLAEGH 397
L LW + + +G++ ++ + S L+ G
Sbjct: 433 VPTVMTYNILLKGYSRIGAFHDVLSLWKMM------LKRGVNADEISCSTLLEALFKLGD 486
Query: 398 LEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIY 457
+A L + L + +V ++ L K ++ EAK I+
Sbjct: 487 FNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKE----------------ILD 530
Query: 458 DTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRC 517
+ I C ++ L G+ G +K+A + M P +YN LI +
Sbjct: 531 NVNIFRCK-PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKY 589
Query: 518 GNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNK 557
+++K D+ +E+ G P + + ALI C + +K
Sbjct: 590 RHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDK 629
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 206/480 (42%), Gaps = 51/480 (10%)
Query: 30 WTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLF 85
W E ++ N + E TYN L+ ++G++EEA M S ++ LI +
Sbjct: 261 WLEMKRRNIE--FSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGY 318
Query: 86 CDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNL 145
C QG D A+ V EM++ G P+ +TYN + A C R +A R L+ P++
Sbjct: 319 CKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDV 374
Query: 146 ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE 205
+S+N L+ G+ GK EA L ++ + TY +LI C G +E A +K E
Sbjct: 375 VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEE 434
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQ 265
M + I PD TY L+ LS A +++ EMLR+G+ PD YT
Sbjct: 435 MTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGD 494
Query: 266 FSKAFHLQDEMIHKG-FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGL 324
KAF L +EM+ PD YN I GLC + +A+E R + +GL
Sbjct: 495 SDKAFRLHEEMVATDHHAPDL--------TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 325 SPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDT 384
PD V+Y+TVI G+ + A L EM +K LY + T
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR--------LYPSV-----------IT 587
Query: 385 FSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFI 444
+ L+ + G LE+A+ E+ P + ++ L + K I EA +L
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 647
Query: 445 SHVCLRMPTFIIYDTLI-ENCSNNEFKSVVGLVK----------GFGMRGLMKKAARAHD 493
P Y LI +NC +++ VV L K G+ R L K + H+
Sbjct: 648 EEGI--PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 705
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 183/391 (46%), Gaps = 34/391 (8%)
Query: 26 FAAAWTETEKTNWKGLADET-TYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHL 84
F AW T++ G+ T TYN + A C GR+++A +L MA D +Y +L+H
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHG 383
Query: 85 FCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPN 144
+ G+ +A +F ++ PS+ TYN ++ C A + + + P+
Sbjct: 384 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD 443
Query: 145 LISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKA 204
+I++ LV+GF G + A E+ EM +KG+ D YT+ G +KAF +
Sbjct: 444 VITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 503
Query: 205 EMV---HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYR 261
EMV H PD Y I LC L +A + +++ R GL PD+ TYT ++ Y
Sbjct: 504 EMVATDHHA--PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 561
Query: 262 LQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPE 321
QF A +L DEM+ K P S +TY +I+G R E+A + M +
Sbjct: 562 ENGQFKMARNLYDEMLRKRLYP--------SVITYFVLIYGHAKAGRLEQAFQYSTEMKK 613
Query: 322 IGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI------------------SWLG 363
G+ P+ ++++ +++G C+ + +AY+ +M+++ I W
Sbjct: 614 RGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEE 673
Query: 364 LWGLYDD-IDKSV-MQGLSHEDTFSNLMSDY 392
+ LY + +DK + G +H F +L D+
Sbjct: 674 VVKLYKEMLDKEIEPDGYTHRALFKHLEKDH 704
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 212/495 (42%), Gaps = 46/495 (9%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
++ + D +KA V+ MI+ G P+V T+N ++ + + I + R
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
E + +++N L+ GF GKMEEA +M + G A+ ++ LI +C +G + A+
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
+ EM++ GI P TY I +LC + +A +L M +PD +Y LM Y
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGY 384
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
+F +A L D++ P S VTYN +I GLC E A + M
Sbjct: 385 IKMGKFVEASLLFDDLRAGDIHP--------SIVTYNTLIDGLCESGNLEGAQRLKEEMT 436
Query: 321 EIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGL--------YDDID 372
+ PD ++Y+T++ GF + L A ++ EM +K I G D D
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 496
Query: 373 KSV-----MQGLSHED---TFSNLMSDYLAE-GHLEKAYLLEREINYFDYLPVDVHYSVF 423
K+ M H T N+ D L + G+L KA +R+I +P V Y+
Sbjct: 497 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556
Query: 424 LNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRG 483
+ + + A++ +YD ++ + L+ G G
Sbjct: 557 IRGYLENGQFKMARN-----------------LYDEMLRKRLYPSVITYFVLIYGHAKAG 599
Query: 484 LMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVL 543
+++A + M + +P+ +N L++ C+ GN+ +AY +M G P+ +S
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659
Query: 544 ALIEALCCVRRYNKM 558
LI C ++ ++
Sbjct: 660 MLISKNCDFEKWEEV 674
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 208/504 (41%), Gaps = 86/504 (17%)
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKR-FREALGILRCLIERGFE 142
++ + +K F +MI GF PSV N IVL RD R +A + +IE G
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCN-IVLKVLRDSRMMNKASAVYETMIEHGIM 235
Query: 143 PNLISFNA-----------------------------------LVQGFCGKGKMEEAEEL 167
P +I+FN L+ GF GKMEEA
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
Query: 168 LQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCL 227
+M + G A+ ++ LI +C +G + A+ + EM++ GI P TY I +LC
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 228 QQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
+ +A +L M +PD +Y LM Y +F +A L D++ P
Sbjct: 356 FGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHP---- 407
Query: 288 GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA 347
S VTYN +I GLC E A + M + PD ++Y+T++ GF + L A
Sbjct: 408 ----SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 463
Query: 348 YKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLERE 407
++ EM +K I G Y ++V + L G +KA+ L E
Sbjct: 464 TEVYDEMLRKGIKPDG----YAYTTRAVGE---------------LRLGDSDKAFRLHEE 504
Query: 408 INYFDYLPVDVH-YSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSN 466
+ D+ D+ Y+V ++ L K + +A I V L +P + Y T+I
Sbjct: 505 MVATDHHAPDLTIYNVRIDGLCKVGNLVKAI-EFQRKIFRVGL-VPDHVTYTTVI----- 557
Query: 467 NEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDM 526
+G+ G K A +D ML P Y +LI+ H + G + +A+
Sbjct: 558 ----------RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQY 607
Query: 527 YMEMVHYGFAPHMFSVLALIEALC 550
EM G P++ + AL+ +C
Sbjct: 608 STEMKKRGVRPNVMTHNALLYGMC 631
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 163/314 (51%), Gaps = 8/314 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
D T+ L+ C +GRV +AL ++ M E Y ++I+ C G + A + ++M
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKME 68
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+T V YNAI+ C+D A + + ++G P++I+++ ++ FC G+
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT 128
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
+AE+LL++M ++ + D T+++LI+ +GKV +A E+ +M+ +GI P TY +I
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
C Q L++A + M + SPD T++ L++ Y + + EM +
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR--- 245
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
GI + VTY +IHG C + + A ++L M G++P+ +++ +++ C +
Sbjct: 246 -----GIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Query: 343 ELGKAYKLKVEMDK 356
EL KA+ + ++ K
Sbjct: 301 ELRKAFAILEDLQK 314
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 132/259 (50%), Gaps = 12/259 (4%)
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M++TG P V T+ ++ C + R +AL ++ ++E G +P + ++ G C G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
E A LL +M + + Y ++I C G A + EM KGI PD TY
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
+I S C ++A L ++M+ R ++PD T++ L++A + + S+A + +M+ +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
P + +TYN++I G C DR +A +L M SPD V++ST+I G+C+
Sbjct: 177 IFP--------TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228
Query: 341 IRELGKAYKLKVEMDKKSI 359
+ + ++ EM ++ I
Sbjct: 229 AKRVDNGMEIFCEMHRRGI 247
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 156/343 (45%), Gaps = 34/343 (9%)
Query: 136 LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
++E G P++++F L+ G C +G++ +A L+ M ++G + Y ++I+ C G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGD 56
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
E A + ++M I Y +I LC A +LF EM +G+ PD TY+G
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
++ ++ +++ A L +MI + PD VT ++A+I+ L + EA EI
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVT--------FSALINALVKEGKVSEAEEI 168
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSV 375
M G+ P ++Y+++I GFC+ L A ++ M KS S V
Sbjct: 169 YGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCS------------PDV 216
Query: 376 MQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITE 435
+ TFS L++ Y ++ + E++ + V Y+ ++ + +
Sbjct: 217 V-------TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA 269
Query: 436 AKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLVK 477
A+ L IS P +I + +++ + CS E + +++
Sbjct: 270 AQDLLNVMISSGV--APNYITFQSMLASLCSKKELRKAFAILE 310
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 128/320 (40%), Gaps = 64/320 (20%)
Query: 241 MLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAII 300
M+ G PD T+T LM+ + + +A L D M+ +G P Y II
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP------------YGTII 48
Query: 301 HGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
+GLC + E AL +L M E + V Y+ +I C+ A L EM K
Sbjct: 49 NGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK--- 105
Query: 361 WLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAY-----LLEREINYFDYLP 415
G++ D+ T+S ++ + G A ++ER+IN P
Sbjct: 106 -----GIFPDVI-----------TYSGMIDSFCRSGRWTDAEQLLRDMIERQIN-----P 144
Query: 416 VDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR---MPTFIIYDTLIENCSNNEFKSV 472
V +S +N L K+ +++EA+ I LR PT I Y+++I+
Sbjct: 145 DVVTFSALINALVKEGKVSEAEE-----IYGDMLRRGIFPTTITYNSMID---------- 189
Query: 473 VGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVH 532
GF + + A R D M + PD ++ LI +C+ V +++ EM
Sbjct: 190 -----GFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 533 YGFAPHMFSVLALIEALCCV 552
G + + LI C V
Sbjct: 245 RGIVANTVTYTTLIHGFCQV 264
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 182/375 (48%), Gaps = 32/375 (8%)
Query: 66 ILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCR--- 122
++R + + T+ +I+ C G+ +KA V +M G SP+V +YN ++ YC+
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 123 DKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKT 182
+ + +A +L+ ++E PNL +FN L+ GF + + ++ +EM + + + +
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
Y SLI+ CN GK+ +A M+ +MV G+ P+ TY LI C L EA D+F +
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
+G P + Y L+ AY + F L++EM +G +PD TYN +I G
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV--------GTYNCLIAG 445
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWL 362
LC E A ++ + GL PD V++ ++ G+CR E KA L EM K +
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 363 GLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDV-HYS 421
L T++ +M Y EG+L+ A + ++ L ++V Y+
Sbjct: 505 HL-------------------TYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545
Query: 422 VFLNVLNKKARITEA 436
V L ++K ++ +A
Sbjct: 546 VLLQGYSQKGKLEDA 560
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 196/403 (48%), Gaps = 34/403 (8%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYK---VF 98
T+N ++ A C+ G++ +A ++ M + +Y +LI +C G K YK V
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM++ SP++ T+N ++ + +D ++ + + ++++ +PN+IS+N+L+ G C
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+ EA + +M G+ + TY +LI+ FC +++A +M + +G +P Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI + C + + F L +EM R G+ PD TY L++ A L D++
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
KG LPD VT++ ++ G C + +A +L+ M ++GL P ++Y+ V+ G+
Sbjct: 465 KG-LPDL--------VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHL 398
C+ L A ++ +M+K+ + + +++ L+ Y +G L
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVA------------------SYNVLLQGYSQKGKL 557
Query: 399 EKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLL 441
E A +L E+ +P + Y + + + + + + HL
Sbjct: 558 EDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLF 600
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/532 (22%), Positives = 231/532 (43%), Gaps = 70/532 (13%)
Query: 41 LADETTYNKL---VLACCRDGRVEEALGILRGMAESDENTYTSLIH-----LFCDQGQCD 92
LA+ Y+K+ + R+G + I ++ D S+I + + + +
Sbjct: 111 LANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFE 170
Query: 93 KAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALV 152
++ F G+ S + +++A ++ R + + + +I R +PN+ +FN ++
Sbjct: 171 LGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVI 230
Query: 153 QGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCN---KGKVEKAFEMKAEMVHK 209
C GKM +A +++++M G + + +Y +LI +C GK+ KA + EMV
Sbjct: 231 NALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEN 290
Query: 210 GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKA 269
+ P+ T+ LI L + +F+EML + + P+ +Y L++ + S+A
Sbjct: 291 DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEA 350
Query: 270 FHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAV 329
++D+M+ G P+ +TYNA+I+G C D +EAL++ + G P
Sbjct: 351 ISMRDKMVSAGVQPNL--------ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 330 SYSTVIFGFCRIRELGKAYKLKVEMDKKSI-SWLGLW-----GLYDD---------IDKS 374
Y+ +I +C++ ++ + LK EM+++ I +G + GL + D+
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 375 VMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARIT 434
+GL TF LM Y +G KA +L +E++ P + Y++ + K+ +
Sbjct: 463 TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 435 EAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDR 494
A + LRM Y+ L++ G+ +G ++ A +
Sbjct: 523 AATNMRTQMEKERRLRM-NVASYNVLLQ---------------GYSQKGKLEDANMLLNE 566
Query: 495 MLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP----HMFSV 542
MLE P+ Y ++ EMV GF P H+F+V
Sbjct: 567 MLEKGLVPNRITYEIV----------------KEEMVDQGFVPDIEGHLFNV 602
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 148/355 (41%), Gaps = 52/355 (14%)
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
LM A + + + ++ EMI + P+ T +N +I+ LC + +A ++
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFT--------FNVVINALCKTGKMNKARDV 245
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSV 375
+ M G SP+ VSY+T+I G+C++ GK YK L + ++ V
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAV-------------LKEMVENDV 292
Query: 376 MQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITE 435
L+ TF+ L+ + + +L + + +E+ D P + Y+ +N L +I+E
Sbjct: 293 SPNLT---TFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISE 349
Query: 436 AKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVV---GLVKGFGMRGLMKKAARA 491
A +S P I Y+ LI C N+ K + G VKG G
Sbjct: 350 AISMRDKMVSAGV--QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV--------- 398
Query: 492 HDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCC 551
P +YN+LI +C+ G + + + EM G P + + LI LC
Sbjct: 399 ----------PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC- 447
Query: 552 VRRYN-KMSWVIQNTLRSCNLNDSELLQVLNEIDVREGQTEYLRGELAERAMDGL 605
R N + + + + L S L D +L E R+G++ L E + GL
Sbjct: 448 -RNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 223/515 (43%), Gaps = 39/515 (7%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
++N L+ C G + EAL + M E D TY L F G A++V +M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPN-LISFNALVQGFCGKGK 160
+D G SP V TY ++ C+ L +L+ ++ RGFE N +I + ++ G C G+
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 378
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
++EA L +M GL+ D Y+ +IH C GK + A + EM K ILP++ T+G
Sbjct: 379 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 438
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
L+ LC + L EA L ++ G + D Y ++ Y +A L +I
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE-- 496
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
TGI+ S T+N++I+G C EA +IL + GL+P VSY+T++ +
Sbjct: 497 ------TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 341 IRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEK 400
+L+ EM + I + Y I K + +G HE+ + L E EK
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNV--TYSVIFKGLCRGWKHENC-----NHVLRERIFEK 603
Query: 401 AYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTL 460
R++ P + Y+ + L + ++ A F+ + +
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA-----------------FVFLEIM 646
Query: 461 IENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNV 520
+ + L+ + G ++KA + E N Y LI HC G+
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDP 706
Query: 521 HKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRY 555
A ++ +++H GF + A+I LC RR+
Sbjct: 707 EMAVKLFHQLLHRGFNVSIRDYSAVINRLC--RRH 739
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 228/511 (44%), Gaps = 58/511 (11%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEM 101
++ L+ R V+++L IL+ M + + N +Y S+++ F + DK + V+ E+
Sbjct: 126 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEI 182
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
D + TY+ +V CR ++ +A+ LR + P+++SFN+++ G+C G +
Sbjct: 183 KD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+ A+ + + GL ++ LI+ C G + +A E+ ++M G+ PD+ TY L
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
L +S A+++ ++ML +GLSPD TYT L+ L +M+ +GF
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
+ S + + ++ GLC R +EAL + M GLSPD V+YS VI G C++
Sbjct: 359 ELN-------SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDI-DKSVMQGLSHEDTFSNLMSDYLAEGH-LE 399
+ A LW LYD++ DK + L + T L+ +G LE
Sbjct: 412 GKFDMA----------------LW-LYDEMCDKRI---LPNSRTHGALLLGLCQKGMLLE 451
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
LL+ I+ + L + V Y++ ++ K I EA ++
Sbjct: 452 ARSLLDSLISSGETLDI-VLYNIVIDGYAKSGCIEEALE-----------------LFKV 493
Query: 460 LIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGN 519
+IE + L+ G+ + +A + D + P Y L+ + CGN
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 520 VHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
++ EM G P + + + LC
Sbjct: 554 TKSIDELRREMKAEGIPPTNVTYSVIFKGLC 584
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 162/353 (45%), Gaps = 32/353 (9%)
Query: 20 DVMIRGF------AAAWTETEKTNWKGLA-DETTYNKLVLACCRDGRVEEALGIL----- 67
+++ +GF + AW KGL+ D TY L+ C+ G ++ L +L
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 68 RGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFR 127
RG + + ++ C G+ D+A +F +M G SP + Y+ ++ C+ +F
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 128 EALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
AL + + ++ PN + AL+ G C KG + EA LL + G LD Y +I
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 188 HLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
+ G +E+A E+ ++ GI P T+ LI C Q ++EA + + GL+
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Query: 248 PDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLC--- 304
P +YT LM AY L+ EM +G P ++VTY+ I GLC
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP--------TNVTYSVIFKGLCRGW 587
Query: 305 --------LLDRA-EEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
L +R E+ + LR M G+ PD ++Y+T+I CR++ L A+
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 150/333 (45%), Gaps = 32/333 (9%)
Query: 28 AAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENT----YTSLIH 83
A W E + + L + T+ L+L C+ G + EA +L + S E Y +I
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 476
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
+ G ++A ++F +I+TG +PSVAT+N+++ YC+ + EA IL + G P
Sbjct: 477 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAP 536
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI--------HLFCNKGK 195
+++S+ L+ + G + +EL +EM +G+ + TY+ + H CN
Sbjct: 537 SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL 596
Query: 196 VEKAFEMKAE----MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
E+ FE + M +GI PD TY +I LC + LS AF + M R L +
Sbjct: 597 RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 656
Query: 252 TYTGLMSAYRLQAQFSKA----FHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLD 307
TY L+ + + KA + LQ++ +S S Y +I C+
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQ------------NVSLSKFAYTTLIKAHCVKG 704
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
E A+++ + G + YS VI CR
Sbjct: 705 DPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 223/515 (43%), Gaps = 39/515 (7%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
++N L+ C G + EAL + M E D TY L F G A++V +M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPN-LISFNALVQGFCGKGK 160
+D G SP V TY ++ C+ L +L+ ++ RGFE N +I + ++ G C G+
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 378
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
++EA L +M GL+ D Y+ +IH C GK + A + EM K ILP++ T+G
Sbjct: 379 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 438
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
L+ LC + L EA L ++ G + D Y ++ Y +A L +I
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE-- 496
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
TGI+ S T+N++I+G C EA +IL + GL+P VSY+T++ +
Sbjct: 497 ------TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 341 IRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEK 400
+L+ EM + I + Y I K + +G HE+ + L E EK
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNV--TYSVIFKGLCRGWKHENC-----NHVLRERIFEK 603
Query: 401 AYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTL 460
R++ P + Y+ + L + ++ A F+ + +
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA-----------------FVFLEIM 646
Query: 461 IENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNV 520
+ + L+ + G ++KA + E N Y LI HC G+
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDP 706
Query: 521 HKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRY 555
A ++ +++H GF + A+I LC RR+
Sbjct: 707 EMAVKLFHQLLHRGFNVSIRDYSAVINRLC--RRH 739
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 228/511 (44%), Gaps = 58/511 (11%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEM 101
++ L+ R V+++L IL+ M + + N +Y S+++ F + DK + V+ E+
Sbjct: 126 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEI 182
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
D + TY+ +V CR ++ +A+ LR + P+++SFN+++ G+C G +
Sbjct: 183 KD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+ A+ + + GL ++ LI+ C G + +A E+ ++M G+ PD+ TY L
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
L +S A+++ ++ML +GLSPD TYT L+ L +M+ +GF
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
+ S + + ++ GLC R +EAL + M GLSPD V+YS VI G C++
Sbjct: 359 ELN-------SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDI-DKSVMQGLSHEDTFSNLMSDYLAEGH-LE 399
+ A LW LYD++ DK + L + T L+ +G LE
Sbjct: 412 GKFDMA----------------LW-LYDEMCDKRI---LPNSRTHGALLLGLCQKGMLLE 451
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
LL+ I+ + L + V Y++ ++ K I EA ++
Sbjct: 452 ARSLLDSLISSGETLDI-VLYNIVIDGYAKSGCIEEALE-----------------LFKV 493
Query: 460 LIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGN 519
+IE + L+ G+ + +A + D + P Y L+ + CGN
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 520 VHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
++ EM G P + + + LC
Sbjct: 554 TKSIDELRREMKAEGIPPTNVTYSVIFKGLC 584
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 162/353 (45%), Gaps = 32/353 (9%)
Query: 20 DVMIRGF------AAAWTETEKTNWKGLA-DETTYNKLVLACCRDGRVEEALGIL----- 67
+++ +GF + AW KGL+ D TY L+ C+ G ++ L +L
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 68 RGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFR 127
RG + + ++ C G+ D+A +F +M G SP + Y+ ++ C+ +F
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 128 EALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
AL + + ++ PN + AL+ G C KG + EA LL + G LD Y +I
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 188 HLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
+ G +E+A E+ ++ GI P T+ LI C Q ++EA + + GL+
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Query: 248 PDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLC--- 304
P +YT LM AY L+ EM +G P ++VTY+ I GLC
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP--------TNVTYSVIFKGLCRGW 587
Query: 305 --------LLDRA-EEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
L +R E+ + LR M G+ PD ++Y+T+I CR++ L A+
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 150/333 (45%), Gaps = 32/333 (9%)
Query: 28 AAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENT----YTSLIH 83
A W E + + L + T+ L+L C+ G + EA +L + S E Y +I
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 476
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
+ G ++A ++F +I+TG +PSVAT+N+++ YC+ + EA IL + G P
Sbjct: 477 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAP 536
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI--------HLFCNKGK 195
+++S+ L+ + G + +EL +EM +G+ + TY+ + H CN
Sbjct: 537 SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL 596
Query: 196 VEKAFEMKAE----MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
E+ FE + M +GI PD TY +I LC + LS AF + M R L +
Sbjct: 597 RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 656
Query: 252 TYTGLMSAYRLQAQFSKA----FHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLD 307
TY L+ + + KA + LQ++ +S S Y +I C+
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQ------------NVSLSKFAYTTLIKAHCVKG 704
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
E A+++ + G + YS VI CR
Sbjct: 705 DPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 164/323 (50%), Gaps = 14/323 (4%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKV 97
D TYN L+ C G EA ++ M ++++ T+ + C + + + +
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK 402
Query: 98 FAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
E++D GFSP + TY+ ++ AY + AL ++R + ++G + N I+ N ++ C
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+ K++EA LL +++G +D+ TY +LI F + KVEKA EM EM I P
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVS 522
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
T+ LIG LC A + F E+ GL PD+ T+ ++ Y + + KAF +E
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNES 582
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
I F PD + T N +++GLC E+AL + E D V+Y+T+I
Sbjct: 583 IKHSFKPD--------NYTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDTVTYNTMIS 633
Query: 337 GFCRIRELGKAYKLKVEMDKKSI 359
FC+ ++L +AY L EM++K +
Sbjct: 634 AFCKDKKLKEAYDLLSEMEEKGL 656
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 210/459 (45%), Gaps = 46/459 (10%)
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL-RCLIERGFEPNLISFNALV 152
A +VF +M+ G S +V T+N +V YC + + +ALG+L R + E P+ +++N ++
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 153 QGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL 212
+ KG++ + +ELL +M + GL + TY +L++ +C G +++AF++ M +L
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 213 PDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHL 272
PD TY LI LC ++ E +L M L PD TY L+ +A L
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 273 QDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEI-GLSPDAVSY 331
++M + G+ + VT+N + LC ++ E ++ + ++ G SPD V+Y
Sbjct: 368 MEQMEND--------GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419
Query: 332 STVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSD 391
T+I + ++ +L A ++ EM +K I + T + ++
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI-------------------TLNTILDA 460
Query: 392 YLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRM 451
E L++A+ L + ++ +V Y + ++ ++ +A +W
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE--MWDEMKKVKIT 518
Query: 452 PTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLI 511
PT +++LI G G + A D + E PD + +N +I
Sbjct: 519 PTVSTFNSLI---------------GGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 512 FDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
+C+ G V KA++ Y E + + F P ++ L+ LC
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 216/510 (42%), Gaps = 51/510 (10%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE-----SDENTYTSLIHLFCDQGQCDKAYKVFAE 100
T+N LV C +G++E+ALG+L M D TY +++ +G+ ++ +
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLD 265
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M G P+ TYN +V YC+ +EA I+ + + P+L ++N L+ G C G
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
M E EL+ M L D TY +LI G +A ++ +M + G+ + T+
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385
Query: 221 LIGSLCLQQTLSEAFDLFQEMLR-RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
+ LC ++ +E++ G SPD TY L+ AY S A + EM K
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
G I + +T N I+ LC + +EA +L + G D V+Y T+I GF
Sbjct: 446 G--------IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF 497
Query: 340 RIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLE 399
R ++ KA ++ EM K I+ TF++L+ G E
Sbjct: 498 REEKVEKALEMWDEMKKVKIT-------------------PTVSTFNSLIGGLCHHGKTE 538
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
A E+ LP D ++ + K+ R+ +A F Y+
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA-----------------FEFYNE 581
Query: 460 LIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGN 519
I++ + + L+ G G+ +KA + ++E + D YN +I C+
Sbjct: 582 SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDTVTYNTMISAFCKDKK 640
Query: 520 VHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+ +AYD+ EM G P F+ + I L
Sbjct: 641 LKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 207/455 (45%), Gaps = 36/455 (7%)
Query: 36 TNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQC 91
+ +K D TYN ++ A + GR+ + +L M ++ + TY +L++ +C G
Sbjct: 232 SEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSL 291
Query: 92 DKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
+A+++ M T P + TYN ++ C RE L ++ + +P+++++N L
Sbjct: 292 KEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL 351
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH-KG 210
+ G G EA +L+++M G+ + T+ + C + K E E+V G
Sbjct: 352 IDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG 411
Query: 211 ILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAF 270
PD TY LI + LS A ++ +EM ++G+ + T ++ A + + +A
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471
Query: 271 HLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVS 330
+L + +GF+ D VTY +I G ++ E+ALE+ M ++ ++P +
Sbjct: 472 NLLNSAHKRGFIVD--------EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVST 523
Query: 331 YSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMS 390
++++I G C + K E+ + L GL D + TF++++
Sbjct: 524 FNSLIGGLC--------HHGKTELAMEKFDELAESGLLPD-----------DSTFNSIIL 564
Query: 391 DYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR 450
Y EG +EKA+ E + P + ++ LN L K+ +A L +F + + R
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA---LNFFNTLIEER 621
Query: 451 MPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGL 484
+ Y+T+I C + + K L+ +GL
Sbjct: 622 EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 21/293 (7%)
Query: 39 KGLADET-TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDK 93
KG+ T T N ++ A C++ +++EA +L + DE TY +LI F + + +K
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A +++ EM +P+V+T+N+++ C + A+ L E G P+ +FN+++
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
G+C +G++E+A E E + D+ T L++ C +G EKA ++ + +
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV- 623
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY----------RLQ 263
D TY +I + C + L EA+DL EM +GL PD TY +S L
Sbjct: 624 DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Query: 264 AQFSKAF-----HLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
+FS F LQ E + ++T + Y+ +I LC R +E
Sbjct: 684 KKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 30 WTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLF 85
W E +K K +T+N L+ C G+ E A+ +AES D++T+ S+I +
Sbjct: 509 WDEMKKV--KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGY 566
Query: 86 CDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNL 145
C +G+ +KA++ + E I F P T N ++ C++ +AL LIE E +
Sbjct: 567 CKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDT 625
Query: 146 ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEM 202
+++N ++ FC K++EA +LL EM +KGL D TY S I L GK+ + E+
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 131/558 (23%), Positives = 246/558 (44%), Gaps = 58/558 (10%)
Query: 34 EKTNWKGLA-DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQ 88
EK G+A D TYN L+ C R +EA + M + D+ TY +L+ ++
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 89 GQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISF 148
+ +A KV EM+ GFSPS+ TYN+++ AY RD EA+ + + E+G +P++ ++
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 149 NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH 208
L+ GF GK+E A + +EM G + T+ + I ++ N+GK + ++ E+
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSK 268
G+ PD T+ L+ SE +F+EM R G P+ +T+ L+SAY F +
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 269 AFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDA 328
A + M+ G PD TYN ++ L E++ ++L M + P+
Sbjct: 508 AMTVYRRMLDAGVTPDL--------STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 329 VSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLW-----------GLYDDIDKSVMQ 377
++Y +++ + +E+G + L E+ I + L + +++ +
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 378 ----GLSHE-DTFSNLMSDYLAEGHLEKA-----YLLEREINYFDYLPVDVHYSVFLNVL 427
G S + T ++++S Y + KA Y+ ER + P Y+ + +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER-----GFTPSMATYNSLMYMH 674
Query: 428 NKKARITEAKHHLLWFISHVCLRMPTFIIYDTLI-ENCSNNEFKSVVGLVKGFGMRGLMK 486
++ A +++ L ++ P I Y+T+I C N M+
Sbjct: 675 SRSADFGKSEEILREILAKGI--KPDIISYNTVIYAYCRNTR----------------MR 716
Query: 487 KAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALI 546
A+R M PD YN I + +A + M+ +G P+ + +++
Sbjct: 717 DASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Query: 547 EALCCVRRYNKMSWVIQN 564
+ C + R ++ +++
Sbjct: 777 DGYCKLNRKDEAKLFVED 794
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/552 (23%), Positives = 228/552 (41%), Gaps = 92/552 (16%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQC-DKAYKV 97
D +Y L+ A GR EA+ + + M E TY ++++F G +K +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 98 FAEMIDTGFSPSV-----------------------------------ATYNAIVLAYCR 122
+M G +P TYNA++ Y +
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 123 DKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKT 182
R +EA+ +L ++ GF P+++++N+L+ + G ++EA EL +M +KG D T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
YT+L+ F GKVE A + EM + G P+ T+ I + +E +F E+
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
GLSPD T+ L++ + S+ + EM GF+P+ T+N +I
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE--------RETFNTLISA 498
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWL 362
E+A+ + R M + G++PD +Y+TV+ R ++ K+ EM+
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK-- 556
Query: 363 GLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSV 422
+E T+ +L+ AY +EI L +V+ V
Sbjct: 557 -----------------PNELTYCSLL----------HAYANGKEIGLMHSLAEEVYSGV 589
Query: 423 FLNVLNKKARITEAKHHLLWFISHVCLR---MPTF-IIYDTLIENCSNNEFKSVVGLVKG 478
E + LL + VC + +P + L E + + ++ +V
Sbjct: 590 I-----------EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 479 FGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPH 538
+G R ++ KA D M E + P A YN L++ H R + K+ ++ E++ G P
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 539 MFSVLALIEALC 550
+ S +I A C
Sbjct: 699 IISYNTVIYAYC 710
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/490 (23%), Positives = 212/490 (43%), Gaps = 56/490 (11%)
Query: 69 GMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRD----K 124
G++ + SLI D GQ D V +E+ + F + ++ +LA+ + K
Sbjct: 94 GLSPQGQQVLRSLIEPNFDSGQLDS---VLSELFEP-FKDKPESTSSELLAFLKGLGFHK 149
Query: 125 RFREALGILRCLIERGFEPNLI--SFNALVQGFCGK-GKMEEAEELLQEMNQKGLALDDK 181
+F AL +++ +++ S A++ GK G++ A + + + G +LD
Sbjct: 150 KFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVY 209
Query: 182 TYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQT-LSEAFDLFQE 240
+YTSLI F N G+ +A + +M G P TY ++ T ++ L ++
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 241 MLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAII 300
M G++PD TY L++ + + +A + +EM GF S VTYNA++
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGF--------SYDKVTYNALL 321
Query: 301 HGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
R +EA+++L M G SP V+Y+++I + R L +A +LK +M +K
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK--- 378
Query: 361 WLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHY 420
G D+ T++ L+S + G +E A + E+ P +
Sbjct: 379 -----GTKPDVF-----------TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 421 SVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFG 480
+ F+ + + + TE ++ +VC P + ++TL+ FG
Sbjct: 423 NAFIKMYGNRGKFTEMMK--IFDEINVCGLSPDIVTWNTLL---------------AVFG 465
Query: 481 MRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMF 540
G+ + + M + P+ +N LI + RCG+ +A +Y M+ G P +
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 541 SVLALIEALC 550
+ ++ AL
Sbjct: 526 TYNTVLAALA 535
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 75/130 (57%), Gaps = 4/130 (3%)
Query: 46 TYNKLVLACCRD---GRVEEAL-GILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN L+ R G+ EE L IL + D +Y ++I+ +C + A ++F+EM
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
++G P V TYN + +Y D F EA+G++R +I+ G PN ++N++V G+C +
Sbjct: 726 RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRK 785
Query: 162 EEAEELLQEM 171
+EA+ ++++
Sbjct: 786 DEAKLFVEDL 795
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 142/585 (24%), Positives = 242/585 (41%), Gaps = 82/585 (14%)
Query: 47 YNKLVLACCRDGRVEEALGI-----LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
YN ++ C+ G +E A + L+G + E T+ ++I+ FC +G + ++ +E+
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLE-TFGTMINGFCKEGDFVASDRLLSEV 301
Query: 102 IDTGF-----------------------------------SPSVATYNAIVLAYCRDKRF 126
+ G P VATYN ++ C++ +
Sbjct: 302 KERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKK 361
Query: 127 REALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSL 186
A+G L ++G PN +S+ L+Q +C + + A +LL +M ++G D TY L
Sbjct: 362 EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGIL 421
Query: 187 IHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL 246
IH G ++ A MK +++ +G+ PDA Y L+ LC A LF EML R +
Sbjct: 422 IHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
Query: 247 SPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLL 306
PD Y L+ + F +A K F G+ V +NA+I G C
Sbjct: 482 LPDAYVYATLIDGFIRSGDFDEA--------RKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 307 DRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWG 366
+EAL + M E L PD +YST+I G+ + +++ A K+ M+K
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK------ 587
Query: 367 LYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNV 426
+ T+++L++ + +G + A +E+ D +P V Y+ +
Sbjct: 588 -------------PNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 427 LNKKARITE-AKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLM 485
L K++ E A ++ +++ C+ P + ++ L++ V+ G G
Sbjct: 635 LAKESSTLEKAVYYWELMMTNKCV--PNEVTFNCLLQGFVKKTSGKVLAEPDG-SNHGQS 691
Query: 486 KKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLAL 545
+ RM + A YN + C G V A +MV GF+P S A+
Sbjct: 692 SLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAI 751
Query: 546 IEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLNEIDVREGQT 590
+ C V N W + CNL + L E+ VR Q
Sbjct: 752 LHGFCVVG--NSKQW---RNMDFCNLGEKGL-----EVAVRYSQV 786
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 223/513 (43%), Gaps = 49/513 (9%)
Query: 60 VEEALGILRGMAESDENTYTSL---IHLFCDQGQCDKAYKVFAEMIDTGFS-PSVATYNA 115
+E+ LG LR E+ + T+ +L +H + + G KA +++ +++ S P V N+
Sbjct: 118 IEDVLGNLRN--ENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNS 175
Query: 116 IVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKG 175
++ + +R +A + + +RG + S LV+G C +GK+E +L++ KG
Sbjct: 176 LLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKG 235
Query: 176 LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAF 235
+ Y ++I +C G +E A+ + E+ KG +P +T+G +I C + +
Sbjct: 236 CIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASD 295
Query: 236 DLFQEMLRRGLSPDNKTYTGLMSA-YRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHV 294
L E+ RGL ++ A YR + A + +I PD
Sbjct: 296 RLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDV--------A 346
Query: 295 TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
TYN +I+ LC + E A+ L + GL P+ +SY+ +I +C+ +E A KL ++M
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 355 DKKS-----------ISWLGLWGLYDDI----DKSVMQGLSHEDTFSN-LMSDYLAEGHL 398
++ I L + G DD K + +G+S + N LMS G
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 399 EKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYD 458
A LL E+ + LP Y+ ++ + EA+ L + + D
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF-------SLSVEKGVKVD 519
Query: 459 TLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCG 518
+ N ++KGF G++ +A +RM E + PD Y+ +I + +
Sbjct: 520 VVHHN----------AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Query: 519 NVHKAYDMYMEMVHYGFAPHMFSVLALIEALCC 551
++ A ++ M P++ + +LI CC
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC 602
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 143/313 (45%), Gaps = 14/313 (4%)
Query: 34 EKTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQ 88
++ + KGL + +Y L+ A C+ + A +L MAE D TY LIH
Sbjct: 369 DEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVS 428
Query: 89 GQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISF 148
G D A + ++ID G SP A YN ++ C+ RF A + +++R P+ +
Sbjct: 429 GHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVY 488
Query: 149 NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH 208
L+ GF G +EA ++ +KG+ +D + ++I FC G +++A M
Sbjct: 489 ATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSK 268
+ ++PD TY +I QQ ++ A +F+ M + P+ TYT L++ + Q F
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKM 608
Query: 269 AFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRA-EEALEILRGMPEIGLSPD 327
A EM + +P+ VTY +I L E+A+ M P+
Sbjct: 609 AEETFKEMQLRDLVPNV--------VTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPN 660
Query: 328 AVSYSTVIFGFCR 340
V+++ ++ GF +
Sbjct: 661 EVTFNCLLQGFVK 673
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 175/450 (38%), Gaps = 51/450 (11%)
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH-KGILPDADTYGPL 221
E E++L + + + L + + ++H + G + KA E+ +V +PD L
Sbjct: 117 EIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSL 176
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
+ L + L +A ++ EM RG S DN + L+ + + L + KG
Sbjct: 177 LSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGC 236
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
+P+ V YN II G C L E A + + + G P ++ T+I GFC+
Sbjct: 237 IPNIVF--------YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKE 288
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
+ + +L E+ ++ + + +W L + ID G Y +
Sbjct: 289 GDFVASDRLLSEVKERGLR-VSVWFLNNIIDAKYRHG-------------YKVDPAESIG 334
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR--MPTFIIYDT 459
+++ D P Y++ +N L K+ + K + F+ + +P + Y
Sbjct: 335 WIIAN-----DCKPDVATYNILINRLCKEGK----KEVAVGFLDEASKKGLIPNNLSYAP 385
Query: 460 LIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCG 518
LI+ C + E+ L+ RG KPD Y +LI G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGC----------------KPDIVTYGILIHGLVVSG 429
Query: 519 NVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQ 578
++ A +M ++++ G +P L+ LC R+ + L L D+ +
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 579 VLNEIDVREGQTEYLRGELAERAMDGLLLD 608
L + +R G + R + G+ +D
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 133/343 (38%), Gaps = 46/343 (13%)
Query: 229 QTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTG 288
+ +E D+ + + ++ + ++ AY SKA + D ++ L D V
Sbjct: 113 RIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVE---LYDSVPD 169
Query: 289 ISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
+ + N+++ L R +A ++ M + G S D S ++ G C
Sbjct: 170 V----IACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCN-------- 217
Query: 349 KLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSN-LMSDYLAEGHLEKAYLLERE 407
+ KVE+ +K I G WG +G F N ++ Y G +E AYL+ +E
Sbjct: 218 EGKVEVGRKLIE--GRWG----------KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKE 265
Query: 408 INYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNN 467
+ ++P + +N K+ A LL + LR+ + + NN
Sbjct: 266 LKLKGFMPTLETFGTMINGFCKEGDFV-ASDRLLSEVKERGLRVSVWFL---------NN 315
Query: 468 EFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMY 527
++ G A + ++ + KPD A YN+LI C+ G A
Sbjct: 316 -------IIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFL 368
Query: 528 MEMVHYGFAPHMFSVLALIEALCCVRRYNKMS-WVIQNTLRSC 569
E G P+ S LI+A C + Y+ S ++Q R C
Sbjct: 369 DEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/540 (25%), Positives = 227/540 (42%), Gaps = 99/540 (18%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D YN A + G+VEEA+ + R M D YT+LI C QG+C A+ +
Sbjct: 395 DRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM 454
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM TG +P + YN + + +EA L+ + RG +P ++ N +++G
Sbjct: 455 IEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDA 514
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEM---------------- 202
G++++AE + + K D S++ FC G ++ AFE
Sbjct: 515 GELDKAEAFYESLEHKSREND----ASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTL 570
Query: 203 ------------KAE-----MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
KA+ M G+ P+ YG LIG+ C + +A + F+ ++ +
Sbjct: 571 FTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKK 630
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCL 305
+ PD TYT +++ Y + +A+ L ++M + PD VTY+ +++
Sbjct: 631 IVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDV--------VTYSVLLN---- 678
Query: 306 LDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLW 365
++ L++ R M + PD V Y+ +I +C + +L K Y L +M ++ I
Sbjct: 679 ---SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREI------ 729
Query: 366 GLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLN 425
+ D + +V+ E S RE+ FD P +Y+V ++
Sbjct: 730 -VPDVVTYTVLLKNKPERNLS-------------------REMKAFDVKPDVFYYTVLID 769
Query: 426 VLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLM 485
K + EAK I+D +IE+ + + L+ G +
Sbjct: 770 WQCKIGDLGEAKR-----------------IFDQMIESGVDPDAAPYTALIACCCKMGYL 812
Query: 486 KKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLAL 545
K+A DRM+E KPD Y LI CR G V KA + EM+ G P S+ A+
Sbjct: 813 KEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 229/545 (42%), Gaps = 78/545 (14%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
Y ++ C + + + A V +M G P V Y+AI+ + ++ +A+ + +
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+++ N + ++++Q +C G EA +L +E + ++LD Y GKV
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
E+A E+ EM KGI PD Y LIG CLQ S+AFDL EM G +PD Y L
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLC---LLDRAE--- 310
+AF M ++G P ++VT+N +I GL LD+AE
Sbjct: 473 AGGLATNGLAQEAFETLKMMENRGVKP--------TYVTHNMVIEGLIDAGELDKAEAFY 524
Query: 311 EALE---------ILRGMPEIGL--------------SPDAVSYSTVIFGFCRIRE---- 343
E+LE +++G G P +V Y T+ C ++
Sbjct: 525 ESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSV-YFTLFTSLCAEKDYISK 583
Query: 344 ----LGKAYKLKVEMDKKSISWL-GLWGLYDDIDKS--------VMQGLSHEDTFSNLMS 390
L + +KL VE +K L G W +++ K+ + + T++ +++
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 391 DYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR 450
Y ++AY L ++ D P V YSV LN + + K + F
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPE----LDMKREMEAFDV----- 694
Query: 451 MPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLM-----------KKAARAHDRMLEG 498
+P + Y +I C N+ K V L K R ++ K R R ++
Sbjct: 695 IPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKA 754
Query: 499 -NYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNK 557
+ KPD Y +LI C+ G++ +A ++ +M+ G P ALI A CC Y K
Sbjct: 755 FDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALI-ACCCKMGYLK 813
Query: 558 MSWVI 562
+ +I
Sbjct: 814 EAKMI 818
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 133/582 (22%), Positives = 231/582 (39%), Gaps = 109/582 (18%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
Y K+V C + R+E+A ++ M + D Y+++I KA VF +M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ + ++I+ YC+ F EA + + E + + +N GK+
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
EEA EL +EM KG+A D YT+LI C +GK AF++ EM G PD Y L
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK-- 279
G L EAF+ + M RG+ P T+ ++ + KA + + HK
Sbjct: 473 AGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSR 532
Query: 280 --------GF-------------------LP---------------DFVT---------- 287
GF LP D+++
Sbjct: 533 ENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMW 592
Query: 288 --GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELG 345
G+ Y +I C ++ +A E + + PD +Y+ +I +CR+ E
Sbjct: 593 KLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 346 KAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLE 405
+AY L +M ++ D+ V+ T+S L++ ++ L+ ++
Sbjct: 653 QAYALFEDMKRR------------DVKPDVV-------TYSVLLN---SDPELD----MK 686
Query: 406 REINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRM-PTFIIYDTLIENC 464
RE+ FD +P V+Y++ ++N+ + + K F + P + Y L++N
Sbjct: 687 REMEAFDVIPDVVYYTI---MINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNK 743
Query: 465 SNNEFKSVVGLVKGFGMR----------------GLMKKAARAHDRMLEGNYKPDGAVYN 508
+++ +K F ++ G + +A R D+M+E PD A Y
Sbjct: 744 PE---RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYT 800
Query: 509 LLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
LI C+ G + +A ++ M+ G P + ALI C
Sbjct: 801 ALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCC 842
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 149/345 (43%), Gaps = 42/345 (12%)
Query: 8 FKTFLRNRVP-PPDVMIRGFAAAWTETEKTN---------WK-GLADETT-YNKLVLACC 55
F+ F+R P P V F + E + + WK G+ E + Y KL+ A C
Sbjct: 552 FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWC 611
Query: 56 RDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVA 111
R V +A + D TYT +I+ +C + +AY +F +M P V
Sbjct: 612 RVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVV 671
Query: 112 TYNAIVLA--YCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
TY+ ++ + KR EA ++ P+++ + ++ +C +++ L +
Sbjct: 672 TYSVLLNSDPELDMKREMEAFDVI---------PDVVYYTIMINRYCHLNDLKKVYALFK 722
Query: 170 EMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQ 229
+M ++ + D TYT L+ NK + + EMKA V PD Y LI C
Sbjct: 723 DMKRREIVPDVVTYTVLLK---NKPERNLSREMKAFDVK----PDVFYYTVLIDWQCKIG 775
Query: 230 TLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGI 289
L EA +F +M+ G+ PD YT L++ +A + D MI G PD V
Sbjct: 776 DLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVP-- 833
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
Y A+I G C +A+++++ M E G+ P S S V
Sbjct: 834 ------YTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 194/475 (40%), Gaps = 100/475 (21%)
Query: 146 ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE 205
I++ +V+G C + ++E+AE ++ +M + G+ D Y+++I + KA ++ +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQ-------------------------- 239
M+ K + ++ C SEA+DLF+
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 240 ---------EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIS 290
EM +G++PD YT L+ LQ + S AF L EM G PD
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDI----- 466
Query: 291 TSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
V YN + GL A+EA E L+ M G+ P V+++ VI G EL KA
Sbjct: 467 ---VIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAF 523
Query: 351 KVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINY 410
++ KS + D S+++G + A G L+ A+ ER I
Sbjct: 524 YESLEHKS----------RENDASMVKG-------------FCAAGCLDHAF--ERFIRL 558
Query: 411 FDYLPVDVHYSVFLNVLNKKARITEAKHHL--LWFISHVCLRMPTFIIYDTLIEN-CSNN 467
LP V++++F ++ +K I++A+ L +W + P +Y LI C N
Sbjct: 559 EFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGV----EPEKSMYGKLIGAWCRVN 614
Query: 468 EFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMY 527
++KA + ++ PD Y ++I +CR +AY ++
Sbjct: 615 N----------------VRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALF 658
Query: 528 MEMVHYGFAPHM--FSVLALIEALCCVRRYNKMSWVIQNTL-------RSCNLND 573
+M P + +SVL + ++R + VI + + R C+LND
Sbjct: 659 EDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLND 713
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
YT LI C G +A ++F +MI++G P A Y A++ C+ +EA I +I
Sbjct: 764 YTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMI 823
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
E G +P+++ + AL+ G C G + +A +L++EM +KG+ K S +H
Sbjct: 824 ESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK-PTKASLSAVH 873
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 158/302 (52%), Gaps = 12/302 (3%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY +V C+ G + AL +L M E++ Y+++I C D A +F
Sbjct: 217 DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM + G P+V TY++++ C R+ +A +L +IER PNL++F+AL+ F K
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+ +AE+L +EM ++ + + TY+SLI+ FC ++ +A +M M+ K LP+ TY
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C + + + +LF+EM +RGL + TYT L+ + A + +M+
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 456
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
G P+ +TYN ++ GLC + +A+ + + + PD +Y+ +I G
Sbjct: 457 VGVHPNI--------LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Query: 339 CR 340
C+
Sbjct: 509 CK 510
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 195/395 (49%), Gaps = 31/395 (7%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN L+ CR R+ AL +L M E D T SL++ FC + A + +M
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
++ G+ P T+ ++ + EA+ ++ +++RG +P+L+++ A+V G C +G
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+ A LL +M + + Y+++I C + A + EM +KG+ P+ TY L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I LC S+A L +M+ R ++P+ T++ L+ A+ + + KA L +EMI +
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
P+ TY+++I+G C+LDR EA ++L M P+ V+Y+T+I GFC+
Sbjct: 355 DPNI--------FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
+ + K +L EM ++ GL G + T++ L+ + + A
Sbjct: 407 KRVDKGMELFREMSQR-----GLVG--------------NTVTYTTLIHGFFQARDCDNA 447
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
++ +++ P + Y++ L+ L K ++ +A
Sbjct: 448 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/537 (24%), Positives = 241/537 (44%), Gaps = 51/537 (9%)
Query: 21 VMIRGFAAAWTET-EKTNWKGLADETTYN--KLVLACCRDGRVEEALGILRGMAESDENT 77
+++RG AA + + + + +T+Y+ +++ D +++A+G+ MA+S
Sbjct: 17 LVVRGNAATFPLSFSFCRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFP 76
Query: 78 ----YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
++ L+ + D +M G S ++ TYN ++ +CR R AL +L
Sbjct: 77 SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALL 136
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+++ G+EP++++ N+L+ GFC ++ +A L+ +M + G D T+T+LIH
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
K +A + MV +G PD TYG ++ LC + A +L +M + + Y
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
+ ++ + A +L EM +KG P+ +TY+++I LC R +A
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNV--------ITYSSLISCLCNYGRWSDAS 308
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDK 373
+L M E ++P+ V++S +I F + +L KA KL EM K+S ID
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS------------IDP 356
Query: 374 SVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARI 433
++ T+S+L++ + L +A + + D LP V Y+ +N K R+
Sbjct: 357 NIF-------TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Query: 434 TEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHD 493
+ L +S L T + Y TLI GF A
Sbjct: 410 DKG-MELFREMSQRGLVGNT-VTYTTLIH---------------GFFQARDCDNAQMVFK 452
Query: 494 RMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
+M+ P+ YN+L+ C+ G + KA ++ + P +++ +IE +C
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYK 96
L + TYN L+ C+ RV++ + + R M++ + TYT+LIH F CD A
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 449
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
VF +M+ G P++ TYN ++ C++ + +A+ + L EP++ ++N +++G C
Sbjct: 450 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Query: 157 GKGK 160
GK
Sbjct: 510 KAGK 513
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 146/376 (38%), Gaps = 81/376 (21%)
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
NK + +F K E++ GI + TY LI C LS A L +M++ G PD
Sbjct: 92 NKFDLVISFGEKMEIL--GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIV 149
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
T L++ + + S A L D+M+ G+ PD VT+ +IHGL L ++A E
Sbjct: 150 TLNSLLNGFCHGNRISDAVALVDQMVEMGYKPD--------TVTFTTLIHGLFLHNKASE 201
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDI 371
A+ ++ M + G PD V+Y V+ G C+ + A L +M+ I + +Y +
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV--IYSTV 259
Query: 372 DKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKA 431
S+ + HED NL F + NK
Sbjct: 260 IDSLCK-YRHEDDALNL----------------------------------FTEMENKGV 284
Query: 432 RITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARA 491
R P I Y +LI N G A+R
Sbjct: 285 R-------------------PNVITYSSLISCLCN---------------YGRWSDASRL 310
Query: 492 HDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCC 551
M+E P+ ++ LI + G + KA +Y EM+ P++F+ +LI C
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Query: 552 VRRYNKMSWVIQNTLR 567
+ R + +++ +R
Sbjct: 371 LDRLGEAKQMLELMIR 386
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TY+ L+ C R+ EA +L M D TY +LI+ FC + DK ++F EM
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G + TY ++ + + + A + + ++ G PN++++N L+ G C GK+
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
+A + + + + + D TY +I C GK
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 163/327 (49%), Gaps = 19/327 (5%)
Query: 39 KGLA-DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDK 93
KGL +E YN ++ CR G + A + M + D Y LI FC+ G+ +
Sbjct: 383 KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A K +M G SPSV TYN ++ Y R F + IL+ + + G PN++S+ L+
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
C K+ EA+ + ++M +G++ + Y LI C+KGK+E AF EM+ KGI
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
+ TY LI L + LSEA DL E+ R+GL PD TY L+S Y + L
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL-RGMPEIGLSPDAVSYS 332
+EM G P TY+ +I LC +E +E+ R E+ L PD + Y+
Sbjct: 623 EEMKRSGIKPTL--------KTYHLLI-SLC----TKEGIELTERLFGEMSLKPDLLVYN 669
Query: 333 TVIFGFCRIRELGKAYKLKVEMDKKSI 359
V+ + ++ KA+ L+ +M +KSI
Sbjct: 670 GVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/532 (25%), Positives = 230/532 (43%), Gaps = 53/532 (9%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN L+ C+ G E++ + M E T+ +L+ G + A V EM
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
D GF P T++ + Y +++ ALG+ ++ G + N + + L+ C +GK+
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK-GILPDADTYGP 220
E+AEE+L KGL ++ Y ++I +C KG + A MK E + K G+ PD Y
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAMEKQGMKPDHLAYNC 429
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
LI C + A +M +G+SP +TY L+ Y + +F K F + EM G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
+P+ V+ Y +I+ LC + EA + R M + G+SP Y+ +I G C
Sbjct: 490 TMPNVVS--------YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCS 541
Query: 341 IRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQG-LSHED---------------- 383
++ A++ EM KK I L L ID M G LS +
Sbjct: 542 KGKIEDAFRFSKEMLKKGIE-LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600
Query: 384 TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWF 443
T+++L+S Y G++++ L E+ P Y + +++ K+ E L
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG--IELTERLFGE 658
Query: 444 ISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPD 503
+S P ++Y+ G++ + + G M+KA +M+E + D
Sbjct: 659 MSL----KPDLLVYN---------------GVLHCYAVHGDMEKAFNLQKQMIEKSIGLD 699
Query: 504 GAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRY 555
YN LI + G + + + EM P + +++ C V+ Y
Sbjct: 700 KTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDY 751
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 161/323 (49%), Gaps = 12/323 (3%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAES--DENTYTS--LIHLFCDQGQCDKAYK 96
+ D T++ L + + E ALG+ +S N YT L++ C +G+ +KA +
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+ + G P+ YN ++ YCR A + + ++G +P+ +++N L++ FC
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
G+ME AE+ + +M KG++ +TY LI + K + +K F++ EM G +P+
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
+YG LI LC L EA + ++M RG+SP + Y L+ + + AF EM
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
+ K GI + VTYN +I GL + + EA ++L + GL PD +Y+++I
Sbjct: 556 LKK--------GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 337 GFCRIRELGKAYKLKVEMDKKSI 359
G+ + + L EM + I
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGI 630
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 151/342 (44%), Gaps = 36/342 (10%)
Query: 29 AWTETEKTNWKGLADET-TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIH 83
A E K KG++ TYN L+ R ++ IL+ M ++ + +Y +LI+
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
C + +A V +M D G SP V YN ++ C + +A + ++++G E
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
NL+++N L+ G GK+ EAE+LL E+++KGL D TY SLI + G V++ +
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQ 263
EM GI P TY LI SLC ++ + LF EM L PD Y G++ Y +
Sbjct: 623 EEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVH 678
Query: 264 AQFSKAFHLQDEMIHKGFLPDFVT---------------------------GISTSHVTY 296
KAF+LQ +MI K D T + TY
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
Query: 297 NAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
N I+ G C + A R M E G D + ++ G
Sbjct: 739 NIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 210/511 (41%), Gaps = 58/511 (11%)
Query: 64 LGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRD 123
L IL + Y I K ++F M PSV YN ++ C+
Sbjct: 168 LNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKG 227
Query: 124 KRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTY 183
KR +A + ++ R P+LI++N L+ G+C G E++ ++ + M + T+
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
+L+ G VE A + EM G +PDA T+ L + A +++ +
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGL 303
G+ + T + L++A + + KA + + KG +P+ V YN +I G
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN--------EVIYNTMIDGY 399
Query: 304 CLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLG 363
C A + M + G+ PD ++Y+ +I FC + E+ A K
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK-------------- 445
Query: 364 LWGLYDDIDKSVMQGLSHE-DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSV 422
+++K ++G+S +T++ L+ Y + +K + + +E+ +P V Y
Sbjct: 446 ------EVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGT 499
Query: 423 FLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNN--------------- 467
+N L K +++ EA ++ P IY+ LI+ C +
Sbjct: 500 LINCLCKGSKLLEA--QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 468 ---EFKSVV--GLVKGFGMRGLMKKAARAHDRMLE---GNYKPDGAVYNLLIFDHCRCGN 519
E V L+ G M G K + A D +LE KPD YN LI + GN
Sbjct: 558 KGIELNLVTYNTLIDGLSMTG---KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 520 VHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
V + +Y EM G P + + LI +LC
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLI-SLC 644
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 16/277 (5%)
Query: 47 YNKLVLACCRDGRVEEAL----GILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
YN L+ CC G++E+A +L+ E + TY +LI G+ +A + E+
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
G P V TYN+++ Y + + + + G +P L +++ L+ C K +E
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIE 650
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
E L EM+ L D Y ++H + G +EKAF ++ +M+ K I D TY LI
Sbjct: 651 LTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
L E L EM R + P+ TY ++ + + A+ EM KGFL
Sbjct: 708 LGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM 319
D G N ++ GL R++EA ++ M
Sbjct: 768 LDVCIG--------NELVSGLKEEWRSKEAEIVISEM 796
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 14/226 (6%)
Query: 45 TTYNKLVLACCRDGRVEEA----LGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
TYN L+ G++ EA L I R + D TY SLI + G + ++ E
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGIL-RCLIERGFEPNLISFNALVQGFCGKG 159
M +G P++ TY+ ++++ C +E + + R E +P+L+ +N ++ + G
Sbjct: 625 MKRSGIKPTLKTYH-LLISLCT----KEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHG 679
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
ME+A L ++M +K + LD TY SLI GK+ + + EM + + P+ADTY
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPD----NKTYTGLMSAYR 261
++ C + A+ ++EM +G D N+ +GL +R
Sbjct: 740 IIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWR 785
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 114/561 (20%), Positives = 195/561 (34%), Gaps = 162/561 (28%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFC--------------- 86
DE N VL + R+E A G+L + SD + S LF
Sbjct: 55 GDEKLRNLRVL--LQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSY 112
Query: 87 --------DQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
+ +A +F + + G PS + ++ + K+FR + + ++E
Sbjct: 113 LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 172
Query: 139 RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK 198
F P+ + +Q + L D V K
Sbjct: 173 SDFRPSKFMYGKAIQA--------------------AVKLSD---------------VGK 197
Query: 199 AFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
E+ M H I P Y LI LC + +++A LF
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLF-------------------- 237
Query: 259 AYRLQAQFSKAFHLQDEMIHKGFLPDFVT---------------------------GIST 291
DEM+ + LP +T I
Sbjct: 238 ---------------DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 292 SHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLK 351
S +T+N ++ GL E+A +L+ M ++G PDA ++S + G+
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS----------- 331
Query: 352 VEMDKKSISWLGLWGLYDDIDKSVMQGLS-HEDTFSNLMSDYLAEGHLEKA-YLLEREIN 409
++K+ + LG++ + +V G+ + T S L++ EG +EKA +L RE+
Sbjct: 332 ---NEKAEAALGVY------ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMA 382
Query: 410 YFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEF 469
+P +V Y+ ++ +K + A+ + + D L NC
Sbjct: 383 K-GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ-------GMKPDHLAYNC----- 429
Query: 470 KSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYME 529
L++ F G M+ A + ++M P YN+LI + R K +D+ E
Sbjct: 430 -----LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 530 MVHYGFAPHMFSVLALIEALC 550
M G P++ S LI LC
Sbjct: 485 MEDNGTMPNVVSYGTLINCLC 505
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 7/212 (3%)
Query: 39 KGL-ADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLF---CDQGQCDKA 94
KGL D TYN L+ G V+ + + M S HL C + +
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELT 652
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
++F EM P + YN ++ Y +A + + +IE+ + ++N+L+ G
Sbjct: 653 ERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILG 709
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
GK+ E L+ EMN + + + TY ++ C A+ EM KG L D
Sbjct: 710 QLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL 246
L+ L + EA + EM R L
Sbjct: 770 VCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 163/320 (50%), Gaps = 17/320 (5%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
TY LV A C+ G+V+E ++R + E D Y++ IH + G A E
Sbjct: 208 VTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRE 267
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M++ G + V +Y+ ++ ++ EALG+L +I+ G EPNLI++ A+++G C GK
Sbjct: 268 MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+EEA L + G+ +D+ Y +LI C KG + +AF M +M +GI P TY
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
+I LC+ +SEA + + +G+ D TY+ L+ +Y I +
Sbjct: 388 VINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLE-----IRRR 437
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
FL I V N ++ L+ EA + R MPE+ L+PD +Y+T+I G+C+
Sbjct: 438 FLE---AKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCK 494
Query: 341 IRELGKAYKLKVEMDKKSIS 360
++ +A ++ E+ K S+S
Sbjct: 495 TGQIEEALEMFNELRKSSVS 514
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 209/457 (45%), Gaps = 48/457 (10%)
Query: 20 DVMIRGFAAAWTETEK---------TNWKGLADETTYNKLVLACCRDGRVEEALGILRGM 70
D +I GF+ + K N T+ L+ G ++ A+ +L M
Sbjct: 101 DSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMM 160
Query: 71 AESDEN------TYTSLIHLFCDQGQCDKAYKVFAEMIDTG-FSPSVATYNAIVLAYCRD 123
+ N +++I FC G+ + A F +D+G P++ TY +V A C+
Sbjct: 161 TNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQL 220
Query: 124 KRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTY 183
+ E ++R L + GFE + + ++ + G+ G + +A +EM +KG+ D +Y
Sbjct: 221 GKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSY 280
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
+ LI +G VE+A + +M+ +G+ P+ TY +I LC L EAF LF +L
Sbjct: 281 SILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILS 340
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGL 303
G+ D Y L+ + ++AF + +M +G P S +TYN +I+GL
Sbjct: 341 VGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQP--------SILTYNTVINGL 392
Query: 304 CLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL-------KVEMD- 355
C+ R EA E+ +G+ +G D ++YST++ + +++ + ++ K+ MD
Sbjct: 393 CMAGRVSEADEVSKGV--VG---DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDL 447
Query: 356 ------KKSISWLGLWGLYDDIDKSV--MQGLSHEDTFSNLMSDYLAEGHLEKAYLLERE 407
K+ +G +G D + +++ M T++ ++ Y G +E+A + E
Sbjct: 448 VMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE 507
Query: 408 INYFDYLPVDVHYSVFLNVLNKKARITEAKHHL--LW 442
+ + V Y+ ++ L KK + A L LW
Sbjct: 508 LRK-SSVSAAVCYNRIIDALCKKGMLDTATEVLIELW 543
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 147/623 (23%), Positives = 252/623 (40%), Gaps = 110/623 (17%)
Query: 46 TYNKLVLACCRDGRVEEAL----GILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TY ++ C+ G++EEA IL E DE Y +LI C +G ++A+ + +M
Sbjct: 314 TYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM 373
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREA------------------------------LG 131
G PS+ TYN ++ C R EA L
Sbjct: 374 EQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLE 433
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
I R +E +L+ N L++ F G EA+ L + M + L D TY ++I +C
Sbjct: 434 IRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYC 493
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
G++E+A EM E+ K + A Y +I +LC + L A ++ E+ +GL D
Sbjct: 494 KTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIH 552
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIS--TSHV---TYNAIIHGLCLL 306
T L+ + KG L V G+ S V N I LC
Sbjct: 553 TSRTLLHSIHANGG------------DKGIL-GLVYGLEQLNSDVCLGMLNDAILLLCKR 599
Query: 307 DRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC--RIRELGKAYKLKVEMDKKSISWLGL 364
E A+E+ M GL+ V++ + I +R L AY L V + ++S +
Sbjct: 600 GSFEAAIEVYMIMRRKGLT---VTFPSTILKTLVDNLRSL-DAYLLVVNAGETTLSSM-- 653
Query: 365 WGLYDDIDKSVM-QGLSHED----------------------TFSNLMSDYLAEGHLEKA 401
D ID +++ GL E T+++L++ +G L +A
Sbjct: 654 ----DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEA 709
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLI 461
L + +P +V Y + ++ L K+ +A+ L +S + P IIY++++
Sbjct: 710 LRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLV--PNIIIYNSIV 767
Query: 462 ENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVH 521
+ G+ G + A R R + G PD + +I +C+ G++
Sbjct: 768 D---------------GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDME 812
Query: 522 KAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLN 581
+A ++ E + F L LI+ C R + +++ L S +++++N
Sbjct: 813 EALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVS-----ESVVKLIN 867
Query: 582 EIDVREGQTEYLRGELAERAMDG 604
+D ++E +RG L E G
Sbjct: 868 RVDAELAESESIRGFLVELCEQG 890
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 154/355 (43%), Gaps = 45/355 (12%)
Query: 43 DETTYNKLVLACCRDGRVEEALGI---LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFA 99
D TY ++ C+ G++EEAL + LR + S Y +I C +G D A +V
Sbjct: 481 DTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLI 540
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
E+ + G + T ++ + + + LG++ L + + L N + C +G
Sbjct: 541 ELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRG 600
Query: 160 KMEEAEELLQEMNQKGL----------------------------------ALDDKTYTS 185
E A E+ M +KGL ++D YT
Sbjct: 601 SFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTI 660
Query: 186 LIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
+I+ C +G + KA + + +G+ + TY LI LC Q L EA LF + G
Sbjct: 661 IINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIG 720
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCL 305
L P TY L+ + F A L D M+ KG +P+ + YN+I+ G C
Sbjct: 721 LVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIII--------YNSIVDGYCK 772
Query: 306 LDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
L + E+A+ ++ ++PDA + S++I G+C+ ++ +A + E K+IS
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 6/205 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGIL-----RGMAESDENTYTSLIHLFCDQGQCDKAYKV 97
D Y ++ C++G + +AL + RG+ + TY SLI+ C QG +A ++
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVT-LNTITYNSLINGLCQQGCLVEALRL 712
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
F + + G PS TY ++ C++ F +A +L ++ +G PN+I +N++V G+C
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
G+ E+A ++ + D T +S+I +C KG +E+A + E K I D
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEML 242
+ LI C + + EA L +EML
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREML 857
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 112/250 (44%), Gaps = 3/250 (1%)
Query: 70 MAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREA 129
++ D YT +I+ C +G KA + + G + + TYN+++ C+ EA
Sbjct: 650 LSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEA 709
Query: 130 LGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHL 189
L + L G P+ +++ L+ C +G +AE+LL M KGL + Y S++
Sbjct: 710 LRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDG 769
Query: 190 FCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPD 249
+C G+ E A + + + + PDA T +I C + + EA +F E + +S D
Sbjct: 770 YCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Query: 250 NKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI---IHGLCLL 306
+ L+ + + + +A L EM+ + + + +I + LC
Sbjct: 830 FFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQ 889
Query: 307 DRAEEALEIL 316
R +A++IL
Sbjct: 890 GRVPQAIKIL 899
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 178/442 (40%), Gaps = 48/442 (10%)
Query: 125 RFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYT 184
R L L+ L++ GF P L S + ++ K + +++ K + ++ + Y+
Sbjct: 6 RTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYS 65
Query: 185 SLIHLFCNKGKVEKAFEMKAEMVHKG-ILPDADTYGPLI-GSLCLQQTLSEAFDLFQEML 242
+ F N + E A + + K I P LI G + S+ + ++ L
Sbjct: 66 IVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCL 125
Query: 243 RR-GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIH 301
R G P + T+ L+ + + + A + + M +K F + +A+I
Sbjct: 126 RNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPF------DNFVCSAVIS 179
Query: 302 GLCLLDRAEEALEILRGMPEIG-LSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
G C + + E AL + G L P+ V+Y+T++ C +LGK +++
Sbjct: 180 GFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALC---QLGKVDEVR--------- 227
Query: 361 WLGLWGLYDDIDKSVMQGLSHEDTF-SNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVH 419
D + + +G + F SN + Y G L A + +RE+ V
Sbjct: 228 --------DLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVS 279
Query: 420 YSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGF 479
YS+ ++ L+K+ + EA L I P I Y +I +G
Sbjct: 280 YSILIDGLSKEGNVEEALGLLGKMIKEGV--EPNLITYTAII---------------RGL 322
Query: 480 GMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHM 539
G +++A +R+L + D +Y LI CR GN+++A+ M +M G P +
Sbjct: 323 CKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSI 382
Query: 540 FSVLALIEALCCVRRYNKMSWV 561
+ +I LC R ++ V
Sbjct: 383 LTYNTVINGLCMAGRVSEADEV 404
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 107/535 (20%), Positives = 190/535 (35%), Gaps = 148/535 (27%)
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
++ +GFSP++ + + + R ++F L L + N ++ + F +
Sbjct: 17 LLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNR 76
Query: 161 MEEAEELL--------------------------QEMNQKGLAL------------DDKT 182
E+AE+ + ++ KGL + T
Sbjct: 77 YEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLT 136
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGI------------------------------- 211
+ SLI+ F KG+++ A E+ M +K +
Sbjct: 137 FCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFES 196
Query: 212 -------LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQA 264
+P+ TY L+ +LC + E DL + + G D Y+ + Y
Sbjct: 197 AVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGG 256
Query: 265 QFSKAFHLQDEMIHKGFLPDFVT---------------------------GISTSHVTYN 297
A EM+ KG D V+ G+ + +TY
Sbjct: 257 ALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYT 316
Query: 298 AIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
AII GLC + + EEA + + +G+ D Y T+I G CR L +A+ + +M+++
Sbjct: 317 AIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQR 376
Query: 358 SISWLGLWGLYDDIDKSVMQG-LSHEDTFSN-LMSDYLAEGHLEKAYLLEREINYFDYLP 415
I + I+ M G +S D S ++ D + L +Y+ + I+
Sbjct: 377 GIQP-SILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNID------ 429
Query: 416 VDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGL 475
VL + R EAK I D ++ N L
Sbjct: 430 ---------AVLEIRRRFLEAK-----------------IPMDLVMCNI----------L 453
Query: 476 VKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEM 530
+K F + G +A + M E + PD A Y +I +C+ G + +A +M+ E+
Sbjct: 454 LKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/564 (24%), Positives = 227/564 (40%), Gaps = 93/564 (16%)
Query: 41 LADETTYNKLVLACCRD---GRVEEALGILRGMAE---SDENTYTSLIHLFCDQGQCDKA 94
L + TY+ L+ C GR + L ++ M E + SL+H +C G A
Sbjct: 334 LPNVVTYSTLLCGCLNKKQLGRCKRVLNMM--MMEGCYPSPKIFNSLVHAYCTSGDHSYA 391
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDK------------------------------ 124
YK+ +M+ G P YN ++ + C DK
Sbjct: 392 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451
Query: 125 -----------RFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQ 173
++ +A ++R +I +GF P+ +++ ++ C KME A L +EM +
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 174 KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSE 233
GL D TYT ++ FC G +E+A + EM G P+ TY LI + + +S
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571
Query: 234 AFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD----FVTGI 289
A +LF+ ML G P+ TY+ L+ + Q KA + + M +PD F
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 290 STSH----VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELG 345
S VTY A++ G C R EEA ++L M G P+ + Y +I G C++ +L
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 346 KAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLE 405
+A ++K EM + LY T+S+L+ Y + A +
Sbjct: 692 EAQEVKTEMSEHGFP----ATLY---------------TYSSLIDRYFKVKRQDLASKVL 732
Query: 406 REINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCS 465
++ P V Y+ ++ L K + EA + C P + Y +I+
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC--QPNVVTYTAMID--- 787
Query: 466 NNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYD 525
GFGM G ++ +RM P+ Y +LI C+ G + A++
Sbjct: 788 ------------GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHN 835
Query: 526 MYMEMVHYGFAPHMFSVLALIEAL 549
+ EM + H +IE
Sbjct: 836 LLEEMKQTHWPTHTAGYRKVIEGF 859
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 160/351 (45%), Gaps = 35/351 (9%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
TY L+ C+ RVEEA +L M+ E ++ Y +LI C G+ D+A +V E
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M + GF ++ TY++++ Y + KR A +L ++E PN++ + ++ G C GK
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+EA +L+Q M +KG + TYT++I F GK+E E+ M KG+ P+ TY
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
LI C L A +L +EM + Y ++ + +F ++ L DE+
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDD 877
Query: 281 FLP-----------------------------DFVTGISTSHVTYNAIIHGLCLLDRAEE 311
P F + TYN++I LCL ++ E
Sbjct: 878 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVET 937
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWL 362
A ++ M + G+ P+ S+ ++I G R ++ +A L + I W+
Sbjct: 938 AFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQWI 988
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 218/498 (43%), Gaps = 59/498 (11%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYK 96
+AD TY +V + C+ G +E+A M E + TYT+LIH + + A +
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI----------------ERG 140
+F M+ G P++ TY+A++ +C+ + +A I + +
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
PN++++ AL+ GFC ++EEA +LL M+ +G + Y +LI C GK+++A
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
E+K EM G TY LI + A + +ML +P+ YT ++
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
+ +A+ L M KG P+ VTY A+I G ++ + E LE+L M
Sbjct: 755 CKVGKTDEAYKLMQMMEEKGCQPNV--------VTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 321 EIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLS 380
G++P+ V+Y +I C+ L A+ L EM + W + + V++G +
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH------WPTHTAGYRKVIEGFN 860
Query: 381 HEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHL 440
E +E LL+ EI D P Y + ++ L K R+ A
Sbjct: 861 KE--------------FIESLGLLD-EIGQDDTAPFLSVYRLLIDNLIKAQRLEMA---- 901
Query: 441 LWFISHVCLRMPTFI----IYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRM 495
L + V T + Y++LIE+ C N+ ++ L +G++ + ++ +
Sbjct: 902 LRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE-MQSFCSL 960
Query: 496 LEGNYKPDGAVYNLLIFD 513
++G ++ LL+ D
Sbjct: 961 IKGLFRNSKISEALLLLD 978
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 197/470 (41%), Gaps = 52/470 (11%)
Query: 21 VMIRGFAAAWTETEKTNWKGLADET-------TYNKLVLACCRDGRVEEALGILRGMAE- 72
+M+ F A + W E TY L+ A + +V A + M
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 73 ---SDENTYTSLIHLFCDQGQCDKAYKVFAEMI----------------DTGFSPSVATY 113
+ TY++LI C GQ +KA ++F M D P+V TY
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642
Query: 114 NAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQ 173
A++ +C+ R EA +L + G EPN I ++AL+ G C GK++EA+E+ EM++
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 174 KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSE 233
G TY+SLI + + + A ++ ++M+ P+ Y +I LC E
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 234 AFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSH 293
A+ L Q M +G P+ TYT ++ + + + L + M KG P++
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY-------- 814
Query: 294 VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR--------IRELG 345
VTY +I C + A +L M + Y VI GF + + E+G
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 874
Query: 346 K--------AYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGH 397
+ Y+L ++ K+ L +++ + + T+++L+
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 398 LEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHV 447
+E A+ L E+ +P + + L + ++I+EA LL FISH+
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA-LLLLDFISHM 983
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 135/568 (23%), Positives = 232/568 (40%), Gaps = 77/568 (13%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAE 100
+TYN L+ A + R++ A I R M+ + D T + C G+ +A
Sbjct: 236 STYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALT---- 291
Query: 101 MIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
+++T F P Y ++ C F EA+ L + PN+++++ L+ G K
Sbjct: 292 LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKK 351
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
++ + +L M +G K + SL+H +C G A+++ +MV G +P Y
Sbjct: 352 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 411
Query: 220 PLIGSLCLQQT------LSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
LIGS+C + L A + EML G+ + + ++ KAF +
Sbjct: 412 ILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVI 471
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
EMI +GF+PD TS TY+ +++ LC + E A + M GL D +Y+
Sbjct: 472 REMIGQGFIPD------TS--TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 334 VIFGFCRIRELGKAYKLKVEMDK-----KSISWLGLWGLYDDIDKS----------VMQG 378
++ FC+ + +A K EM + +++ L Y K + +G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 379 -LSHEDTFSNLMSDYLAEGHLEKA-YLLEREINYFDYLPVD---------------VHYS 421
L + T+S L+ + G +EKA + ER D VD V Y
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 422 VFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENC----------------S 465
L+ K R+ EA+ L C P I+YD LI+ S
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGC--EPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 466 NNEFKSVV----GLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVH 521
+ F + + L+ + A++ +MLE + P+ +Y +I C+ G
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761
Query: 522 KAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+AY + M G P++ + A+I+
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 130/601 (21%), Positives = 224/601 (37%), Gaps = 98/601 (16%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLF----CDQGQCDKAYKVFAEM 101
YN LV RD + L+ + + D+ + +++ C G A + +
Sbjct: 167 VYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRL 226
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
D F PS +TYN ++ A+ + R A I R + + + C GK
Sbjct: 227 KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW 286
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
EA L++ N D YT LI C E+A + M LP+ TY L
Sbjct: 287 REALTLVETEN---FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL 343
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
+ ++ L + M+ G P K + L+ AY S A+ L +M+ G
Sbjct: 344 LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403
Query: 282 LPDFVT---------------------------------GISTSHVTYNAIIHGLCLLDR 308
+P +V G+ + + ++ LC +
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463
Query: 309 AEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLY 368
E+A ++R M G PD +YS V+ C ++ A+ L EM + GL
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR--------GGLV 515
Query: 369 DDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLN 428
D+ T++ ++ + G +E+A E+ P V Y+ ++
Sbjct: 516 ADV-----------YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 429 KKARITEAKHHLLWFISHVCLRMPTFIIYDTLIE-NCS---------------------- 465
K +++ A +S CL P + Y LI+ +C
Sbjct: 565 KAKKVSYANELFETMLSEGCL--PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Query: 466 ----------NNEFKSVV---GLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIF 512
N+E +VV L+ GF +++A + D M +P+ VY+ LI
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Query: 513 DHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLR-SCNL 571
C+ G + +A ++ EM +GF +++ +LI+ V+R + S V+ L SC
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 742
Query: 572 N 572
N
Sbjct: 743 N 743
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/478 (19%), Positives = 173/478 (36%), Gaps = 58/478 (12%)
Query: 140 GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKA 199
G++ +NALV + EE LQ++ + + L+ C G A
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIA 219
Query: 200 FEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
E + P TY LI + L A + +EM L D T +
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279
Query: 260 YRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM 319
++ +A L + + F+PD V Y +I GLC EEA++ L M
Sbjct: 280 LCKVGKWREALTLVET---ENFVPD--------TVFYTKLISGLCEASLFEEAMDFLNRM 328
Query: 320 PEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGL 379
P+ V+YST++ G ++LG+ K+ ++ + + G Y
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRC--------KRVLNMMMMEGCY----------- 369
Query: 380 SHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFL-------NVLNKKAR 432
F++L+ Y G AY L +++ ++P V Y++ + + LN
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429
Query: 433 ITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGL-------- 484
K + + V L + + CS +++ +++ +G
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCL--CSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 485 -----------MKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHY 533
M+ A + M G D Y +++ C+ G + +A + EM
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 534 GFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLNEIDVREGQTE 591
G P++ + ALI A ++ + + + + L L + L + + GQ E
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 160/308 (51%), Gaps = 12/308 (3%)
Query: 47 YNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
+++L++A + + E + + R + D ++T+LI FC + A +M+
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
GF PS+ T+ ++V +C RF EA+ ++ ++ G+EPN++ +N ++ C KG++
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
A ++L+ M + G+ D TY SLI + G + + ++M+ GI PD T+ LI
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
+ L EA + EM++R ++P+ TY L++ + +A + + ++ KGF
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
P+ VTYN +I+G C R ++ ++IL M G+ D +Y+T+ G+C+
Sbjct: 322 PN--------AVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 343 ELGKAYKL 350
+ A K+
Sbjct: 374 KFSAAEKV 381
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 158/316 (50%), Gaps = 14/316 (4%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
YN ++ + C G+V AL +L+ M + D TY SLI G + ++ ++M+
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
G SP V T++A++ Y ++ + EA +I+R PN++++N+L+ G C G ++
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
EA+++L + KG + TY +LI+ +C +V+ ++ M G+ D TY L
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAF-HLQDEMIHKGF 281
C S A + M+ G+ PD T+ L+ + KA L+D K
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKT- 425
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
V GI +TYN II GLC D+ E+A + + G+SPD ++Y T++ G R
Sbjct: 426 ----VVGI----ITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477
Query: 342 RELGKAYKLKVEMDKK 357
R +A++L +M K+
Sbjct: 478 RLWREAHELYRKMQKE 493
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 121/246 (49%), Gaps = 5/246 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVF 98
D T++ L+ ++G++ EA M + N TY SLI+ C G D+A KV
Sbjct: 253 DVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVL 312
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
++ GF P+ TYN ++ YC+ KR + + IL + G + + ++N L QG+C
Sbjct: 313 NVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQA 372
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK AE++L M G+ D T+ L+ C+ GK+ KA ++ + TY
Sbjct: 373 GKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
+I LC + +A+ LF + +G+SPD TY +M R + + +A L +M
Sbjct: 433 NIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQK 492
Query: 279 K-GFLP 283
+ G +P
Sbjct: 493 EDGLMP 498
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 139/295 (47%), Gaps = 27/295 (9%)
Query: 92 DKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
+ A +F +M ++ PS+ ++ +++A + ++ + + R L G +L SF L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
+ FC ++ A L +M + G T+ SL++ FC+ + +A + ++V G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
P+ Y +I SLC + ++ A D+ + M + G+ PD TY L++ + +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 272 LQDEMIHKGFLPDFVT---------------------------GISTSHVTYNAIIHGLC 304
+ +M+ G PD +T ++ + VTYN++I+GLC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 305 LLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
+ +EA ++L + G P+AV+Y+T+I G+C+ + + K+ M + +
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 13/289 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TYN L+ G + IL M D T+++LI ++ +GQ +A K +
Sbjct: 218 DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQY 277
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EMI +P++ TYN+++ C EA +L L+ +GF PN +++N L+ G+C
Sbjct: 278 NEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKA 337
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
++++ ++L M++ G+ D TY +L +C GK A ++ MV G+ PD T+
Sbjct: 338 KRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
L+ LC + +A +++ + +KT G+++ + KA ++D
Sbjct: 398 NILLDGLCDHGKIGKALVRLEDLQK------SKTVVGIITYNIIIKGLCKADKVEDAWYL 451
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM-PEIGLSP 326
F + G+S +TY ++ GL EA E+ R M E GL P
Sbjct: 452 --FCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 171/434 (39%), Gaps = 95/434 (21%)
Query: 125 RFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYT 184
+F +AL + + E P+++ F+ L+ K E L + + G++ D ++T
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 185 SLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRR 244
+LI FC + LS A +M++
Sbjct: 119 TLIDCFCRCAR-----------------------------------LSLALSCLGKMMKL 143
Query: 245 GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLC 304
G P T+ L++ + +F +A L D+++ G+ P+ V YN II LC
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVI--------YNTIIDSLC 195
Query: 305 LLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGL 364
+ AL++L+ M ++G+ PD V+Y+++I + G
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLI---------------------TRLFHSGT 234
Query: 365 WGLYDDIDKSVMQ-GLSHE-DTFSNLMSDYLAEGHL---EKAY--LLEREINYFDYLPVD 417
WG+ I +M+ G+S + TFS L+ Y EG L +K Y +++R +N P
Sbjct: 235 WGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN-----PNI 289
Query: 418 VHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLV 476
V Y+ +N L + EAK L +S P + Y+TLI C
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF--PNAVTYNTLINGYCKAKRVDD----- 342
Query: 477 KGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFA 536
GM+ L + D D YN L +C+ G A + MV G
Sbjct: 343 ---GMKILCVMSRDGVD--------GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391
Query: 537 PHMFSVLALIEALC 550
P M++ L++ LC
Sbjct: 392 PDMYTFNILLDGLC 405
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 153/383 (39%), Gaps = 55/383 (14%)
Query: 195 KVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYT 254
K A + +M LP + L+ ++ LF+ + G+S D ++T
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 255 GLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALE 314
L+ + A+ S A +M+ GF P S VT+ ++++G C ++R EA+
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEP--------SIVTFGSLVNGFCHVNRFYEAMS 170
Query: 315 ILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDID-- 372
++ + +G P+ V Y+T+I C ++ A + M K G+ D+
Sbjct: 171 LVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKK--------MGIRPDVVTY 222
Query: 373 KSVMQGLSHEDTF---SNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNK 429
S++ L H T+ + ++SD + G P + +S ++V K
Sbjct: 223 NSLITRLFHSGTWGVSARILSDMMRMG----------------ISPDVITFSALIDVYGK 266
Query: 430 KARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAA 489
+ ++ EAK Y+ +I+ N + L+ G + GL+ +A
Sbjct: 267 EGQLLEAKKQ-----------------YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 490 RAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+ + ++ + P+ YN LI +C+ V + M G F+ L +
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 550 CCVRRYNKMSWVIQNTLRSCNLN 572
C +++ V+ + SC ++
Sbjct: 370 CQAGKFSAAEKVLGRMV-SCGVH 391
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 146/368 (39%), Gaps = 81/368 (22%)
Query: 219 GPLIGSLCLQQTLSEAFDL---FQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
G L+ +L L+ S AF ++E LR GL +F+ A L +
Sbjct: 25 GNLVTALSLRICNSRAFSGRSDYRERLRSGLH---------------SIKFNDALTLFCD 69
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
M LP S V ++ ++ + L++ E + + R + +G+S D S++T+I
Sbjct: 70 MAESHPLP--------SIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 336 FGFCRIREL-------GKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNL 388
FCR L GK KL E SI G S++ G H + F
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFE---PSIVTFG----------SLVNGFCHVNRFYEA 168
Query: 389 MSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVC 448
MS L +I Y P V Y+ ++ L +K ++ A +L + +
Sbjct: 169 MS-------------LVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALD-VLKHMKKMG 214
Query: 449 LRMPTFIIYDTLIENCSNN--------------------EFKSVVGLVKGFGMRGLMKKA 488
+R P + Y++LI ++ + + L+ +G G + +A
Sbjct: 215 IR-PDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 489 ARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
+ ++ M++ + P+ YN LI C G + +A + +V GF P+ + LI
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 549 LCCVRRYN 556
C +R +
Sbjct: 334 YCKAKRVD 341
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 166/348 (47%), Gaps = 47/348 (13%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEM 101
+N L+ C++G + +A + + + ++ +LI+ +C G D+ +++ +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGIL---------------------------- 133
+ P V TY+A++ A C++ + A G+
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 134 -------RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSL 186
+ ++ +G +P+++ +N LV GFC G + A ++ M ++GL D TYT+L
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 187 IHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL 246
I FC G VE A E++ EM GI D + L+ +C + + +A +EMLR G+
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 247 SPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLL 306
PD+ TYT +M A+ + F L EM G +P S VTYN +++GLC L
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP--------SVVTYNVLLNGLCKL 533
Query: 307 DRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
+ + A +L M IG+ PD ++Y+T++ G R K Y K E+
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI 581
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 175/391 (44%), Gaps = 48/391 (12%)
Query: 136 LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
+++ GF N+ FN L+ FC +G + +A+++ E+ ++ L ++ +LI+ +C G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
+++ F +K +M PD TY LI +LC + + A LF EM +RGL P++ +T
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
L+ + + +M+ KG PD V YN +++G C A I
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDI--------VLYNTLVNGFCKNGDLVAARNI 402
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSV 375
+ GM GL PD ++Y+T+I GFCR ++ A +++ EMD+ I ++D+
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI----------ELDRV- 451
Query: 376 MQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITE 435
FS L+ EG + A RE+ P DV Y++ ++ KK
Sbjct: 452 --------GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT 503
Query: 436 AKHHLLWFIS--HVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHD 493
L S HV P+ + Y+ L+ GL K G MK A D
Sbjct: 504 GFKLLKEMQSDGHV----PSVVTYNVLLN-----------GLCK----LGQMKNADMLLD 544
Query: 494 RMLEGNYKPDGAVYNLLIFDHCRCGNVHKAY 524
ML PD YN L+ H R N K Y
Sbjct: 545 AMLNIGVVPDDITYNTLLEGHHRHANSSKRY 575
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 157/323 (48%), Gaps = 25/323 (7%)
Query: 32 ETEKTNWKGLADETTYNKLVLACCRDGRVEEALGIL-----RGMAESDENTYTSLIHLFC 86
+ EK+ + D TY+ L+ A C++ +++ A G+ RG+ +D +T+LIH
Sbjct: 300 QMEKSRTR--PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV-IFTTLIHGHS 356
Query: 87 DQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLI 146
G+ D + + +M+ G P + YN +V +C++ A I+ +I RG P+ I
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 147 SFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEM 206
++ L+ GFC G +E A E+ +EM+Q G+ LD +++L+ C +G+V A EM
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 207 VHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF 266
+ GI PD TY ++ + C + F L +EM G P TY L++ Q
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 267 SKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSP 326
A L D M++ G +PD +TYN ++ G R + + PEIG+
Sbjct: 537 KNADMLLDAMLNIGVVPD--------DITYNTLLEG---HHRHANSSKRYIQKPEIGIVA 585
Query: 327 DAVSYSTVIFGFCRIRELGKAYK 349
D SY ++ + EL +A K
Sbjct: 586 DLASYKSI------VNELDRASK 602
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 42/284 (14%)
Query: 288 GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA 347
G + +N +++ C +A ++ + + L P VS++T+I G+C++ L +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 348 YKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED--TFSNLMSDYLAEGHLEKAYLLE 405
++LK +M+K + D T+S L++ E ++ A+ L
Sbjct: 295 FRLKHQMEKSR---------------------TRPDVFTYSALINALCKENKMDGAHGLF 333
Query: 406 REINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-C 464
E+ +P DV ++ ++ ++ I K +S P ++Y+TL+ C
Sbjct: 334 DEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGL--QPDIVLYNTLVNGFC 391
Query: 465 SNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAY 524
N + + +V G RGL +PD Y LI CR G+V A
Sbjct: 392 KNGDLVAARNIVDGMIRRGL----------------RPDKITYTTLIDGFCRGGDVETAL 435
Query: 525 DMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRS 568
++ EM G AL+ +C R ++ LR+
Sbjct: 436 EIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 11/298 (3%)
Query: 55 CRDGRVEEALGILRGMA-ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATY 113
C+ G+ EEA+ ++ + Y+S + C G +A +F E+ + G P Y
Sbjct: 352 CKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCY 411
Query: 114 NAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK-GKMEEAEELLQEMN 172
++ YC R +A L++ G P+L + L+ G C + G + +AE + + M
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI-GACSRFGSISDAESVFRNMK 470
Query: 173 QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLS 232
+GL LD TY +L+H + ++ K FE+ EM GI PD TY LI S+ ++ +
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 233 EAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTS 292
EA ++ E++RRG P +T ++ + + F +AF L M PD VT
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC---- 586
Query: 293 HVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
+A++HG C R E+A+ + + + GL PD V Y+T+I G+C + ++ KA +L
Sbjct: 587 ----SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 132/302 (43%), Gaps = 40/302 (13%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
I +C G DK +++ M G P + + + C+ +EA +L L G
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG 336
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELL-------------------------------- 168
+ +S ++++ GFC GK EEA +L+
Sbjct: 337 ISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIF 396
Query: 169 QEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQ 228
QE+ + GL D YT++I +CN G+ +KAF+ ++ G P T LIG+
Sbjct: 397 QEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF 456
Query: 229 QTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTG 288
++S+A +F+ M GL D TY LM Y Q +K F L DEM G PD
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV--- 513
Query: 289 ISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
TYN +IH + + +EA EI+ + G P ++++ VI GF + + +A+
Sbjct: 514 -----ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 349 KL 350
L
Sbjct: 569 IL 570
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 110/217 (50%), Gaps = 4/217 (1%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAE 100
TT L+ AC R G + +A + R M D TY +L+H + Q +K +++ E
Sbjct: 444 TTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDE 503
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M G SP VATYN ++ + EA I+ LI RGF P+ ++F ++ GF +G
Sbjct: 504 MRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD 563
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+EA L M + D T ++L+H +C ++EKA + +++ G+ PD Y
Sbjct: 564 FQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNT 623
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
LI C + +A +L M++RG+ P+ T+ L+
Sbjct: 624 LIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 12/267 (4%)
Query: 41 LADETTYNKLVLACCRDGRVEEAL----GILRGMAESDENTYTSLIHLFCDQGQCDKAYK 96
L D Y ++ C GR ++A +L+ T T LI G A
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
VF M G V TYN ++ Y + + + ++ + G P++ ++N L+
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+G ++EA E++ E+ ++G +T +I F +G ++AF + M + PD
Sbjct: 525 VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV 584
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
T L+ C Q + +A LF ++L GL PD Y L+ Y KA L M
Sbjct: 585 TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGL 303
+ +G LP+ T++A++ GL
Sbjct: 645 VQRGMLPN--------ESTHHALVLGL 663
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/478 (22%), Positives = 200/478 (41%), Gaps = 56/478 (11%)
Query: 112 TYNAIVLAYC-RDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQE 170
T +I++ C R+++ AL + + + G P+ +L++ +E A E ++
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 171 MNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQT 230
M +G L+ + I +C+ G +K +E+ M H GI PD + I LC
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 231 LSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL-PDFVTGI 289
L EA + ++ G+S D+ + + ++ + + +A L IH L P+
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL----IHSFRLRPNI---- 373
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
Y++ + +C A I + + E+GL PD V Y+T+I G+C + KA++
Sbjct: 374 ----FVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 350 LKVEMDKK--------SISWLGLWGLYDDID--KSVMQGLSHED------TFSNLMSDYL 393
+ K S +G + I +SV + + E T++NLM Y
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 394 AEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR--M 451
L K + L E+ P Y++ ++ + + I EA IS + R +
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANE----IISELIRRGFV 545
Query: 452 PTFIIYDTLIENCSNN--------------------EFKSVVGLVKGFGMRGLMKKAARA 491
P+ + + +I S + + L+ G+ M+KA
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 492 HDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+++L+ KPD +YN LI +C G++ KA ++ MV G P+ + AL+ L
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 39 KGLADET-TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDK 93
+G T + ++ + G +EA + MA+ D T ++L+H +C + +K
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A +F +++D G P V YN ++ YC +A ++ +++RG PN + +ALV
Sbjct: 602 AIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVL 661
Query: 154 GFCGK---GKMEEAEELLQEM 171
G GK A LL+E+
Sbjct: 662 GLEGKRFVNSETHASMLLEEI 682
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 11/298 (3%)
Query: 55 CRDGRVEEALGILRGMA-ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATY 113
C+ G+ EEA+ ++ + Y+S + C G +A +F E+ + G P Y
Sbjct: 352 CKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCY 411
Query: 114 NAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK-GKMEEAEELLQEMN 172
++ YC R +A L++ G P+L + L+ G C + G + +AE + + M
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI-GACSRFGSISDAESVFRNMK 470
Query: 173 QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLS 232
+GL LD TY +L+H + ++ K FE+ EM GI PD TY LI S+ ++ +
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 233 EAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTS 292
EA ++ E++RRG P +T ++ + + F +AF L M PD VT
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC---- 586
Query: 293 HVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
+A++HG C R E+A+ + + + GL PD V Y+T+I G+C + ++ KA +L
Sbjct: 587 ----SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 132/302 (43%), Gaps = 40/302 (13%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
I +C G DK +++ M G P + + + C+ +EA +L L G
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG 336
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELL-------------------------------- 168
+ +S ++++ GFC GK EEA +L+
Sbjct: 337 ISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIF 396
Query: 169 QEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQ 228
QE+ + GL D YT++I +CN G+ +KAF+ ++ G P T LIG+
Sbjct: 397 QEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF 456
Query: 229 QTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTG 288
++S+A +F+ M GL D TY LM Y Q +K F L DEM G PD
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV--- 513
Query: 289 ISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
TYN +IH + + +EA EI+ + G P ++++ VI GF + + +A+
Sbjct: 514 -----ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 349 KL 350
L
Sbjct: 569 IL 570
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 110/217 (50%), Gaps = 4/217 (1%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAE 100
TT L+ AC R G + +A + R M D TY +L+H + Q +K +++ E
Sbjct: 444 TTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDE 503
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M G SP VATYN ++ + EA I+ LI RGF P+ ++F ++ GF +G
Sbjct: 504 MRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD 563
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+EA L M + D T ++L+H +C ++EKA + +++ G+ PD Y
Sbjct: 564 FQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNT 623
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
LI C + +A +L M++RG+ P+ T+ L+
Sbjct: 624 LIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 12/267 (4%)
Query: 41 LADETTYNKLVLACCRDGRVEEAL----GILRGMAESDENTYTSLIHLFCDQGQCDKAYK 96
L D Y ++ C GR ++A +L+ T T LI G A
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
VF M G V TYN ++ Y + + + ++ + G P++ ++N L+
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+G ++EA E++ E+ ++G +T +I F +G ++AF + M + PD
Sbjct: 525 VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV 584
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
T L+ C Q + +A LF ++L GL PD Y L+ Y KA L M
Sbjct: 585 TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGL 303
+ +G LP+ T++A++ GL
Sbjct: 645 VQRGMLPN--------ESTHHALVLGL 663
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/478 (22%), Positives = 200/478 (41%), Gaps = 56/478 (11%)
Query: 112 TYNAIVLAYC-RDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQE 170
T +I++ C R+++ AL + + + G P+ +L++ +E A E ++
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 171 MNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQT 230
M +G L+ + I +C+ G +K +E+ M H GI PD + I LC
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 231 LSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL-PDFVTGI 289
L EA + ++ G+S D+ + + ++ + + +A L IH L P+
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL----IHSFRLRPNI---- 373
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
Y++ + +C A I + + E+GL PD V Y+T+I G+C + KA++
Sbjct: 374 ----FVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 350 LKVEMDKK--------SISWLGLWGLYDDID--KSVMQGLSHED------TFSNLMSDYL 393
+ K S +G + I +SV + + E T++NLM Y
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 394 AEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR--M 451
L K + L E+ P Y++ ++ + + I EA IS + R +
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANE----IISELIRRGFV 545
Query: 452 PTFIIYDTLIENCSNN--------------------EFKSVVGLVKGFGMRGLMKKAARA 491
P+ + + +I S + + L+ G+ M+KA
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 492 HDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+++L+ KPD +YN LI +C G++ KA ++ MV G P+ + AL+ L
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 39 KGLADET-TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDK 93
+G T + ++ + G +EA + MA+ D T ++L+H +C + +K
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A +F +++D G P V YN ++ YC +A ++ +++RG PN + +ALV
Sbjct: 602 AIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVL 661
Query: 154 GFCGK---GKMEEAEELLQEM 171
G GK A LL+E+
Sbjct: 662 GLEGKRFVNSETHASMLLEEI 682
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 149/310 (48%), Gaps = 27/310 (8%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
T L++ FC Q A +MI G PS+ T+ +++ +CR R +AL + +
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+ G++PN++ +N ++ G C +++ A +LL M + G+ D TY SLI C+ G+
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
A M + M + I PD T+ LI + + +SEA + ++EM+RR L PD TY+ L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT---------------------------GI 289
+ + ++ +A + M+ KG PD VT G+
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
+ VTY +I G C + A EI R M G+ P+ ++Y+ ++ G C ++ KA
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 350 LKVEMDKKSI 359
+ +M K +
Sbjct: 418 ILADMQKNGM 427
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 162/345 (46%), Gaps = 27/345 (7%)
Query: 92 DKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
D ++ +M G ++ T N ++ +CR + AL L +I+ G EP++++F +L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
+ GFC ++ +A + +M G + Y ++I C +V+ A ++ M GI
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
PD TY LI LC S+A + M +R + PD T+ L+ A + + S+A
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
+EMI + PD VTY+ +I+GLC+ R +EA E+ M G PD V+Y
Sbjct: 278 FYEEMIRRSLDPDI--------VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 332 STVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSD 391
S +I G+C+ +++ KL EM ++ + + + T++ L+
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGV-------------------VRNTVTYTILIQG 370
Query: 392 YLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
Y G L A + R + + P + Y+V L+ L +I +A
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 145/298 (48%), Gaps = 12/298 (4%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAE 100
YN ++ C+ +V+ AL +L M + D TY SLI C G+ A ++ +
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M P V T+NA++ A ++ R EA +I R +P++++++ L+ G C +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
++EAEE+ M KG D TY+ LI+ +C KVE ++ EM +G++ + TY
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
LI C L+ A ++F+ M+ G+ P+ TY L+ + KA + +M G
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
D VTYN II G+C +A +I + GL PD +Y+T++ G
Sbjct: 427 MDADI--------VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 146/282 (51%), Gaps = 16/282 (5%)
Query: 19 PDV-----MIRGFAAA--WTETEK-----TNWKGLADETTYNKLVLACCRDGRVEEALG- 65
PDV +I G ++ W++ + T + D T+N L+ AC ++GRV EA
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 66 ---ILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCR 122
++R + D TY+ LI+ C + D+A ++F M+ G P V TY+ ++ YC+
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 123 DKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKT 182
K+ + + + +RG N +++ L+QG+C GK+ AEE+ + M G+ + T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
Y L+H C+ GK+EKA + A+M G+ D TY +I +C +++A+D++ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
+GL PD TYT +M + +A L +M G LP+
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 138/289 (47%), Gaps = 12/289 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D TYN L+ C GR +A ++ M + D T+ +LI +G+ +A + +
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EMI P + TY+ ++ C R EA + ++ +G P++++++ L+ G+C
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
K+E +L EM+Q+G+ + TYT LI +C GK+ A E+ MV G+ P+ TY
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
L+ LC + +A + +M + G+ D TY ++ + + A+ + +
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNC 459
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPD 327
+G +PD TY ++ GL EA + R M E G+ P+
Sbjct: 460 QGLMPDI--------WTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 163/392 (41%), Gaps = 46/392 (11%)
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
K++++ +L M Q ++ L+ K + + +M GI + T
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
L+ C LS A +M++ G P T+ L++ + + A ++ D+M+
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
G+ P+ V YN II GLC + + AL++L M + G+ PD V+Y+++I G C
Sbjct: 181 GYKPNVVI--------YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 340 RIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLE 399
A ++ M K+ I Y D+ TF+ L+ + EG +
Sbjct: 233 SSGRWSDATRMVSCMTKREI--------YPDVF-----------TFNALIDACVKEGRVS 273
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
+A E+ P V YS+ + L +R+ EA+ + +S C P + Y
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF--PDVVTYSI 331
Query: 460 LIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCG 518
LI C + + + + L RG+++ Y +LI +CR G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTV----------------TYTILIQGYCRAG 375
Query: 519 NVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
++ A +++ MV G P++ + L+ LC
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 172/423 (40%), Gaps = 41/423 (9%)
Query: 143 PNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEM 202
P++ F+ L+ K + L ++M G+ + T L++ FC ++ A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 203 KAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRL 262
+M+ G P T+G L+ C + +A +F +M+ G P+ Y ++
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 263 QAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEI 322
Q A L + M G PD VTYN++I GLC R +A ++ M +
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDV--------VTYNSLISGLCSSGRWSDATRMVSCMTKR 250
Query: 323 GLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS------WLGLWGL--YDDIDKS 374
+ PD +++ +I + + +A + EM ++S+ L ++GL Y +D++
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Query: 375 -------VMQG-LSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNV 426
V +G T+S L++ Y +E L E++ + V Y++ +
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQG 370
Query: 427 LNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMK 486
+ ++ A+ + C P I Y+ L+ +N G ++
Sbjct: 371 YCRAGKLNVAEEIFRRMV--FCGVHPNIITYNVLLHGLCDN---------------GKIE 413
Query: 487 KAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALI 546
KA M + D YN++I C+ G V A+D+Y + G P +++ ++
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 547 EAL 549
L
Sbjct: 474 LGL 476
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 200/434 (46%), Gaps = 48/434 (11%)
Query: 39 KGLA-DETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDK 93
KGL+ DE + ++A + R++ L I R M +S + T ++ C +G+ +K
Sbjct: 183 KGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEK 242
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
+ K+ E G P TYN I+ AY + + F G+L+ + + G N +++ L++
Sbjct: 243 SKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLME 302
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
GKM +AE+L EM ++G+ D YTSLI C KG +++AF + E+ KG+ P
Sbjct: 303 LSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSP 362
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
+ TYG LI +C + A L EM +G++ + L+ Y + +A +
Sbjct: 363 SSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIY 422
Query: 274 DEMIHKGFLPDFVT---------------------------GISTSHVTYNAIIHGLCLL 306
D M KGF D T G+ S V+Y +I C
Sbjct: 423 DVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKE 482
Query: 307 DRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVE-----MDKKSISW 361
EEA + M G+ P+A++Y+ +I+ +C+ ++ +A KL+ MD S ++
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTY 542
Query: 362 LGLWG---LYDDIDKSV-------MQGLSHED-TFSNLMSDYLAEGHLEKAYLLEREINY 410
L + D++D+++ ++GL T++ ++S G ++A+ L E+
Sbjct: 543 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602
Query: 411 FDYLPVDVHYSVFL 424
Y + Y+ +
Sbjct: 603 KGYTIDNKVYTALI 616
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 211/486 (43%), Gaps = 43/486 (8%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
+ ++ D G ++ +VF M+ G S + ++A + +R L I R +++ G
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
+ + S +V+G C +G++E++++L++E + KG+ + TY ++I+ + +
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
+ M G++ + TY L+ +S+A LF EM RG+ D YT L+S
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
+ +AF L DE+ KG P S TY A+I G+C + A ++ M
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSP--------SSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 321 EIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI-----------SWLGLWGLYD 369
G++ V ++T+I G+CR + +A + M++K S YD
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 370 DIDK---SVMQGLSHEDT--FSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFL 424
+ + +M+G T ++NL+ Y EG++E+A L E++ P + Y+V +
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 425 NVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIE-NCSNNEFKSVVGLVKGFGMRG 483
K+ +I EA+ L P Y +LI C + + L G++G
Sbjct: 512 YAYCKQGKIKEARK--LRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569
Query: 484 LMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVL 543
L + Y ++I + G +A+ +Y EM G+
Sbjct: 570 L----------------DQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYT 613
Query: 544 ALIEAL 549
ALI ++
Sbjct: 614 ALIGSM 619
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 114/220 (51%), Gaps = 4/220 (1%)
Query: 44 ETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFA 99
+ +N L+ CR G V+EA I M + +D T ++ F + D+A +
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
M++ G S +Y ++ YC++ EA + + +G +PN I++N ++ +C +G
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
K++EA +L M G+ D TYTSLIH C V++A + +EM KG+ ++ TY
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
+I L EAF L+ EM R+G + DNK YT L+ +
Sbjct: 579 VMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 181/436 (41%), Gaps = 52/436 (11%)
Query: 119 AYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLAL 178
Y + F E L + ++++G + S + + +++ E+ + M G+ +
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKI 222
Query: 179 DDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLF 238
+ T ++ C +G+VEK+ ++ E KGI P+A TY +I + Q+ S +
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 239 QEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNA 298
+ M + G+ + TYT LM + S A L DEM +G D HV Y +
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV-------HV-YTS 334
Query: 299 IIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS 358
+I C + A + + E GLSP + +Y +I G C++ E+G A L EM K
Sbjct: 335 LISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG 394
Query: 359 ISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYL----LEREINYFDYL 414
++ + F+ L+ Y +G +++A + +E++ D
Sbjct: 395 VNITQV-------------------VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVF 435
Query: 415 PVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVG 474
+ S F N+ R EAK L + +++ T S
Sbjct: 436 TCNTIASCF----NRLKRYDEAKQWLFRMMEG-GVKLSTV----------------SYTN 474
Query: 475 LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYG 534
L+ + G +++A R M +P+ YN++I+ +C+ G + +A + M G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 535 FAPHMFSVLALIEALC 550
P ++ +LI C
Sbjct: 535 MDPDSYTYTSLIHGEC 550
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 4/188 (2%)
Query: 42 ADETTYNKLVLACCRDGRVEEA----LGILRGMAESDENTYTSLIHLFCDQGQCDKAYKV 97
AD T N + R R +EA ++ G + +YT+LI ++C +G ++A ++
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
F EM G P+ TYN ++ AYC+ + +EA + + G +P+ ++ +L+ G C
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
++EA L EM KGL + TYT +I GK ++AF + EM KG D
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Query: 218 YGPLIGSL 225
Y LIGS+
Sbjct: 612 YTALIGSM 619
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 151/295 (51%), Gaps = 13/295 (4%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
E D T+TSL++ +C + + A +F +++ GF P+V TY ++ C+++ A+
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+ + G PN++++NALV G C G+ +A LL++M ++ + + T+T+LI F
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
GK+ +A E+ M+ + PD TYG LI LC+ L EA +F M R G P+
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
YT L+ F K+ ++D M K F G+ + +TY +I G CL+ R +
Sbjct: 330 IYTTLIHG------FCKSKRVEDGM--KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA-----YKLKVEMDKKSISW 361
A E+ M PD +Y+ ++ G C ++ KA Y K EMD +++
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 216/487 (44%), Gaps = 53/487 (10%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAESDENT----YTSLIHLFCDQGQCDKAYKVFAE 100
++Y K++ + + +AL + M S +T L+ + + D +F +
Sbjct: 49 SSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M G P + T N ++ C + A L +++ GFEP+L++F +L+ G+C +
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+E+A L ++ G + TYT+LI C + A E+ +M G P+ TY
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
L+ LC +A L ++M++R + P+ T+T L+ A+ + +A L + MI
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
PD TY ++I+GLC+ +EA ++ M G P+ V Y+T+I GFC+
Sbjct: 289 VYPDV--------FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340
Query: 341 IRELGKAYKLKVEMDKK-----SISWLGLWGLY-----DDIDKSVMQGLSHE------DT 384
+ + K+ EM +K +I++ L Y D+ + V +S T
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400
Query: 385 FSNLMSDYLAEGHLEKAYLLEREINYFDYL---PVDVHYSVFLNVLNKKARITEAKHHLL 441
++ L+ G +EKA ++ F+Y+ +D++ + ++ ++ + +
Sbjct: 401 YNVLLDGLCCNGKVEKALMI------FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 442 WFISHVCLRM-PTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNY 500
F S M P I Y T+I GF RGL+ +A +M E +
Sbjct: 455 LFCSLFSKGMKPNVITYTTMIS---------------GFCRRGLIHEADSLFKKMKEDGF 499
Query: 501 KPDGAVY 507
P+ +VY
Sbjct: 500 LPNESVY 506
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 96/180 (53%), Gaps = 4/180 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
+E Y L+ C+ RVE+ + I M++ ++ TYT LI +C G+ D A +VF
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+M P + TYN ++ C + + +AL I + +R + N++++ ++QG C
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+E+A +L + KG+ + TYT++I FC +G + +A + +M G LP+ Y
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 186/446 (41%), Gaps = 52/446 (11%)
Query: 109 SVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELL 168
+ ++Y I+ + +F +AL + ++ P++I F L+ + + L
Sbjct: 47 AFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF 106
Query: 169 QEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQ 228
++M G+ T ++H C + +A +M+ G PD T+ L+ C
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 229 QTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTG 288
+ +A LF ++L G P+ TYT L+ + A L ++M G P+ VT
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT- 225
Query: 289 ISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
YNA++ GLC + R +A +LR M + + P+ ++++ +I F ++ +L +A
Sbjct: 226 -------YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 349 KLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA----YLL 404
+L M + S+ Y D+ T+ +L++ G L++A YL+
Sbjct: 279 ELYNVMIQMSV--------YPDVF-----------TYGSLINGLCMYGLLDEARQMFYLM 319
Query: 405 EREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENC 464
ER Y P +V Y+ ++ K R+ + I Y+ +
Sbjct: 320 ERNGCY----PNEVIYTTLIHGFCKSKRVEDGMK----------------IFYEMSQKGV 359
Query: 465 SNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAY 524
N V L++G+ + G A ++M PD YN+L+ C G V KA
Sbjct: 360 VANTITYTV-LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 525 DMYMEMVHYGFAPHMFSVLALIEALC 550
++ M ++ + +I+ +C
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMC 444
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 141/548 (25%), Positives = 238/548 (43%), Gaps = 55/548 (10%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D TY + + G +++A LR M E + +Y LIHL C +A +V+
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
MI GF PS+ TY+++++ + + +G+L+ + G +PN+ +F ++
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+ EA E+L+ M+ +G D TYT LI C K++ A E+ +M PD TY
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
L+ + L + EM + G PD T+T L+ A F +AF D M
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD 391
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
+G LP+ H TYN +I GL + R ++ALE+ M +G+ P A +Y I +
Sbjct: 392 QGILPNL-------H-TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 339 CRIRELGKAYKLKVEMDKKSISW------LGLWGLY----DDIDKSVMQGL------SHE 382
+ + A + +M K I+ L+ L D K + GL
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 383 DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLW 442
T++ +M Y G +++A L E+ P + + +N L K R+ EA +
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA-WKMFM 562
Query: 443 FISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKP 502
+ + L+ PT + Y+TL+ G G G +++A + M++ P
Sbjct: 563 RMKEMKLK-PTVVTYNTLL---------------AGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 503 DGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALI----------EALCCV 552
+ +N L C+ V A M +M+ G P +F+ +I EA+C
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 666
Query: 553 RRYNKMSW 560
+ K+ +
Sbjct: 667 HQMKKLVY 674
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 159/347 (45%), Gaps = 30/347 (8%)
Query: 5 RVLFKTFLRN-----RVPPPDVMIRGFAAA---------WTETEKTNWKGLADETTYNKL 50
R LF+ F ++ ++P +++I G A + + + T + D TYN L
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC--IPDVATYNFL 826
Query: 51 VLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAE-MIDTG 105
+ A + G+++E + + M+ E++ T+ +I G D A ++ + M D
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 106 FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
FSP+ TY ++ + R EA + +++ G PN +N L+ GF G+ + A
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSL 225
L + M ++G+ D KTY+ L+ C G+V++ E+ G+ PD Y +I L
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 226 CLQQTLSEAFDLFQEM-LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
L EA LF EM RG++PD TY L+ + +A + +E+ G P+
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
T+NA+I G L + E A + + M G SP+ +Y
Sbjct: 1067 V--------FTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/544 (21%), Positives = 220/544 (40%), Gaps = 72/544 (13%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYK 96
+ D TYN ++ + G ++EA+ +L M E+ D SLI+ + D+A+K
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+F M + P+V TYN ++ ++ + +EA+ + ++++G PN I+FN L C
Sbjct: 560 MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
++ A ++L +M G D TY ++I G+V++A +M K + PD
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFV 678
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRR-GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
T L+ + + +A+ + L P N + L+ + +A A +
Sbjct: 679 TLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSER 738
Query: 276 MIHKGFLPDFVT-----------------------------GISTSHVTYNAIIHGLCLL 306
++ G D + G+ TYN +I GL
Sbjct: 739 LVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEA 798
Query: 307 DRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWG 366
D E A ++ + G PD +Y+ ++ + + ++ + ++L EM
Sbjct: 799 DMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM------------ 846
Query: 367 LYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREI-NYFDYLPVDVHYSVFLN 425
S + ++ T + ++S + G+++ A L ++ + D+ P Y ++
Sbjct: 847 -------STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 426 VLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLM 485
L+K R+ EAK + + C P IY+ LI GFG G
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGC--RPNCAIYNILIN---------------GFGKAGEA 942
Query: 486 KKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLAL 545
A RM++ +PD Y++L+ C G V + + E+ G P + +
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 546 IEAL 549
I L
Sbjct: 1003 INGL 1006
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 13/277 (4%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TY LI + + A VF ++ TG P VATYN ++ AY + + E + + +
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQE-MNQKGLALDDKTYTSLIHLFCNKGK 195
E N I+ N ++ G G +++A +L + M+ + + TY LI G+
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
+ +A ++ M+ G P+ Y LI A LF+ M++ G+ PD KTY+
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
L+ + + + H E+ G PD V YN II+GL R EEAL +
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDV--------VCYNLIINGLGKSHRLEEALVL 1018
Query: 316 LRGMPEI-GLSPDAVSYSTVIFGF---CRIRELGKAY 348
M G++PD +Y+++I + E GK Y
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 125/573 (21%), Positives = 206/573 (35%), Gaps = 139/573 (24%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAE 100
TYN L+ ++G+++EA+ + GM + + T+ +L C + A K+ +
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREAL----------------------GILRC-LI 137
M+D G P V TYN I+ ++ + +EA+ G+++ LI
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLI 693
Query: 138 ERGF------------EPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD-DKTYT 184
E + +P + + L+ + ++ A + + G+ D D
Sbjct: 694 EDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILV 753
Query: 185 SLIHLFCNKGKVEKAFEMKAEMVHK-GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
+I C V A + + G+ P TY LIG L + A D+F ++
Sbjct: 754 PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 813
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM----------IHKGFLPDFVTG----- 288
G PD TY L+ AY + + F L EM H + V
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873
Query: 289 -------------ISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
S + TY +I GL R EA ++ GM + G P+ Y+ +I
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI 933
Query: 336 FGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAE 395
GF + E A L M K+ G+ D+ T+S L+
Sbjct: 934 NGFGKAGEADAACALFKRMVKE--------GVRPDLK-----------TYSVLVDCLCMV 974
Query: 396 GHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFI 455
G +++ +E+ P V Y++ +N L K R+ EA L+ F
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA---LVLF------------ 1019
Query: 456 IYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHC 515
NE K+ G+ PD YN LI +
Sbjct: 1020 -----------NEMKTSRGIT-------------------------PDLYTYNSLILNLG 1043
Query: 516 RCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
G V +A +Y E+ G P++F+ ALI
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 178/458 (38%), Gaps = 106/458 (23%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAE---SDENTYTSLIHLFCDQGQCDKAYKV 97
+ D TYN ++ ++G+V+EA+ M + D T +L+ + AYK+
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 98 FAEMI---------------------DTGFSPSVATYNAIVL-AYCRDK--------RF- 126
+ + G +V+ +V CRD R+
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS 759
Query: 127 --REALGILRCLIER-----GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD 179
+ R L E+ G +P L ++N L+ G +E A+++ ++ G D
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEM--------------VHKGIL------------- 212
TY L+ + GK+++ FE+ EM V G++
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 213 ---------PDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQ 263
P A TYGPLI L L EA LF+ ML G P+ Y L++ +
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 264 AQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIG 323
+ A L M+ +G PD TY+ ++ LC++ R +E L + + E G
Sbjct: 940 GEADAACALFKRMVKEGVRPDL--------KTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 324 LSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS------------ISWLGLWGL---- 367
L+PD V Y+ +I G + L +A L EM I LG+ G+
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 368 ---YDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAY 402
Y++I ++ ++ + TF+ L+ Y G E AY
Sbjct: 1052 GKIYNEIQRAGLE--PNVFTFNALIRGYSLSGKPEHAY 1087
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 120/553 (21%), Positives = 216/553 (39%), Gaps = 101/553 (18%)
Query: 46 TYNKLVLACCRDGRVEEALGIL----RGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
T N ++ A DG++EE + + + + D NTY ++ +G +A +M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ GF + +YN ++ + + EA+ + R +I GF P+L ++++L+ G + +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+ LL+EM GL + T+T I + GK+
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKI------------------------- 274
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
+EA+++ + M G PD TYT L+ A + A + ++M
Sbjct: 275 ----------NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 282 LPDFVTGIS---------------------------TSHVTYNAIIHGLCLLDRAEEALE 314
PD VT I+ VT+ ++ LC EA +
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 315 ILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLG-LWGLYDDIDK 373
L M + G+ P+ +Y+T+I G R+ L A +L M+ + + ++ D
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 374 SVMQGLSHEDTFSNLMSDYLAEG---------HLEKAYLLEREINYFDY-------LPVD 417
+S +TF + + +A L KA +RE Y +P
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG-RDREAKQIFYGLKDIGLVPDS 503
Query: 418 VHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVK 477
V Y++ + +K I EA L + + C P I+ ++LI N +K+
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGC--EPDVIVVNSLI----NTLYKA------ 551
Query: 478 GFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP 537
+ +A + RM E KP YN L+ + G + +A +++ MV G P
Sbjct: 552 -----DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 538 HMFSVLALIEALC 550
+ + L + LC
Sbjct: 607 NTITFNTLFDCLC 619
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
YN L+ + G + A + + M + D TY+ L+ C G+ D+ F E+
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCL-IERGFEPNLISFNALVQGFCGKGKM 161
++G +P V YN I+ + R EAL + + RG P+L ++N+L+ G +
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMV 1048
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
EEA ++ E+ + GL + T+ +LI + GK E A+ + MV G P+ TY L
Sbjct: 1049 EEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 20 DVMIRGFA------AAWTETEKTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGMAE 72
+++I GF AA ++ +G+ D TY+ LV C GRV+E L + + E
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Query: 73 SDENT----YTSLIHLFCDQGQCDKAYKVFAEM-IDTGFSPSVATYNAIVLAYCRDKRFR 127
S N Y +I+ + ++A +F EM G +P + TYN+++L
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 128 EALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSL 186
EA I + G EPN+ +FNAL++G+ GK E A + Q M G + + TY L
Sbjct: 1050 EAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 130/326 (39%), Gaps = 47/326 (14%)
Query: 229 QTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTG 288
+ ++ FDL Q +R + D TY + + ++ +A + +M GF+
Sbjct: 135 EEMAYVFDLMQ---KRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFV------ 185
Query: 289 ISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
+ +YN +IH L EA+E+ R M G P +YS+++ G + R++
Sbjct: 186 --LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243
Query: 349 KLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREI 408
L EM+ LGL + TF+ + G + +AY + + +
Sbjct: 244 GLLKEMET-----LGLK--------------PNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 409 NYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNE 468
+ P V Y+V ++ L ++ AK ++ P + Y TL++ S+N
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKE--VFEKMKTGRHKPDRVTYITLLDRFSDNR 342
Query: 469 FKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYM 528
+ VK F M + + PD + +L+ C+ GN +A+D
Sbjct: 343 ---DLDSVKQF------------WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 529 EMVHYGFAPHMFSVLALIEALCCVRR 554
M G P++ + LI L V R
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHR 413
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/542 (22%), Positives = 232/542 (42%), Gaps = 76/542 (14%)
Query: 90 QCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFN 149
Q + A ++ + ++D G +P+V T+ ++ +C+ A + + + +RG EP+LI+++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 150 ALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK 209
L+ G+ G + +L + KG+ LD ++S I ++ G + A + M+ +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 210 GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKA 269
GI P+ TY LI LC + EAF ++ ++L+RG+ P TY+ L+ +
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 270 FHLQDEMIHKGFLPDFVT---------------------------GISTSHVTYNAIIHG 302
F L ++MI G+ PD V I + V +N++I G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF------GFCRIRELGKAYKLKVEMDK 356
C L+R +EAL++ R M G+ PD +++TV+ FC+ + +L M +
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQR 565
Query: 357 KSIS-----------WLGLWGLYDDIDK---SVMQGLSHED--TFSNLMSDYLAEGHLEK 400
IS L +D K ++++G D T++ ++ Y + L++
Sbjct: 566 NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE 625
Query: 401 AYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHH-------------------LL 441
A + + + P V ++ ++VL K + A +
Sbjct: 626 AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 685
Query: 442 WFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYK 501
WF V + +F +++ + E + S ++ G RG + +A + ++
Sbjct: 686 WFSKSVDIE-GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 744
Query: 502 PDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWV 561
PD Y +LI +C+ G + +A +Y M+ G P AL E YN W+
Sbjct: 745 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSE-------YNPPKWL 797
Query: 562 IQ 563
+
Sbjct: 798 MS 799
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 199/446 (44%), Gaps = 35/446 (7%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D ++S I ++ G A V+ M+ G SP+V TY ++ C+D R EA G+
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+++RG EP+++++++L+ GFC G + L ++M + G D Y L+ +
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
G + A +M+ + I + + LI C EA +F+ M G+ PD T+
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
T +M ++ F K H++ + + F IS N +IH L R E+A
Sbjct: 535 TTVMRVSIMEDAFCK--HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 592
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK----LKV-EMDKKSISWLGLWGLY 368
+ + E + PD V+Y+T+I G+C +R L +A + LKV +++ L +
Sbjct: 593 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 652
Query: 369 ---DDIDKSV-MQGLSHED-------TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVD 417
+D+D ++ M + E T+ LM + +E ++ L E+ P
Sbjct: 653 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 712
Query: 418 VHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVK 477
V YS+ ++ L K+ R+ EA + I L P + Y LI +
Sbjct: 713 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL--PDVVAYAILI---------------R 755
Query: 478 GFGMRGLMKKAARAHDRMLEGNYKPD 503
G+ G + +AA ++ ML KPD
Sbjct: 756 GYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 146/332 (43%), Gaps = 30/332 (9%)
Query: 18 PPDVMIRGFAAAWTETE-------KTNWKGLADE-----TTYNKLVLACCRDGRVEEALG 65
PPDV+I G + + + K L +N L+ CR R +EAL
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 66 ILRGMA----ESDENTYTSLIHL------FCDQGQCDKAYKVFAEMIDTGFSPSVATYNA 115
+ R M + D T+T+++ + FC + ++F M S +A N
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577
Query: 116 IVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKG 175
++ + R +A LIE EP+++++N ++ G+C +++EAE + + +
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637
Query: 176 LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAF 235
+ T T LIH+ C ++ A M + M KG P+A TYG L+ + +F
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 236 DLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVT 295
LF+EM +G+SP +Y+ ++ + + +A ++ + I LPD V
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV--------VA 749
Query: 296 YNAIIHGLCLLDRAEEALEILRGMPEIGLSPD 327
Y +I G C + R EA + M G+ PD
Sbjct: 750 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 144/329 (43%), Gaps = 24/329 (7%)
Query: 45 TTYNKLVLACCRDGRVEEALG----ILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
TY L+ C+DGR+ EA G IL+ E TY+SLI FC G + ++ +
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
MI G+ P V Y +V + A+ ++ + N++ FN+L+ G+C +
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHL------FCNKGKVEKAFEMKAEMVHKGILPD 214
+EA ++ + M G+ D T+T+++ + FC K ++ M I D
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY---RLQAQFSKAFH 271
+I L + +A F ++ + PD TY ++ Y R + + F
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
L VT + VT +IH LC + + A+ + M E G P+AV+Y
Sbjct: 632 LLK-----------VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 680
Query: 332 STVIFGFCRIRELGKAYKLKVEMDKKSIS 360
++ F + ++ ++KL EM +K IS
Sbjct: 681 GCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 147/314 (46%), Gaps = 18/314 (5%)
Query: 50 LVLACCRDGRVEEALGILR-----GMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDT 104
L+ CCR G V++AL I G+ ++ Y L L + D F ++
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI-GSDRVDLIADHFDKLCRG 210
Query: 105 GFSPSVATYNAIVL--AYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
G PS + + VL +C+ + +AL R ++ERGF ++S N +++G ++E
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGE-VTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIE 268
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
A LL + G A + T+ +LI+ FC +G++++AF++ M +GI PD Y LI
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
L LF + L +G+ D ++ + Y + A + M+ +G
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG-- 386
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
IS + VTY +I GLC R EA + + + G+ P V+YS++I GFC+
Sbjct: 387 ------ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 343 ELGKAYKLKVEMDK 356
L + L +M K
Sbjct: 441 NLRSGFALYEDMIK 454
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 108/213 (50%), Gaps = 4/213 (1%)
Query: 42 ADETTYNKLVLACCRDGRVEEAL----GILRGMAESDENTYTSLIHLFCDQGQCDKAYKV 97
AD N ++ + R+E+A ++ G E D TY ++I +C + D+A ++
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
F + T F P+ T ++ C++ A+ + + E+G +PN +++ L+ F
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+E + +L +EM +KG++ +Y+ +I C +G+V++A + + + +LPD
Sbjct: 690 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 749
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDN 250
Y LI C L EA L++ MLR G+ PD+
Sbjct: 750 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 782
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 170/402 (42%), Gaps = 52/402 (12%)
Query: 177 ALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFD 236
+LD L+ C G V+KA E+ G++ D+ ++ SL + D
Sbjct: 143 SLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIAD 202
Query: 237 LFQEMLRRGLSPDNKTYTG-LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVT 295
F ++ R G+ P + G ++ A + + +KA ++ +GF GI V+
Sbjct: 203 HFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFR----VGI----VS 254
Query: 296 YNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMD 355
N ++ GL + D+ E A +L + + G +P+ V++ T+I GFC+ E+ +A+ L M+
Sbjct: 255 CNKVLKGLSV-DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313
Query: 356 KKSI--SWLGLWGLYDDIDKSVMQGLSHE--------------DTFSNLMSDYLAEGHLE 399
++ I + L D K+ M G+ H+ FS+ + Y+ G L
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR--MPTFIIY 457
A ++ + + P V Y++ + L + RI EA + R P+ + Y
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA----FGMYGQILKRGMEPSIVTY 429
Query: 458 DTLIEN-CSNNEFKS------------------VVG-LVKGFGMRGLMKKAARAHDRMLE 497
+LI+ C +S + G LV G +GLM A R +ML
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 498 GNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHM 539
+ + + V+N LI CR +A ++ M YG P +
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 205/461 (44%), Gaps = 60/461 (13%)
Query: 61 EEALGILRGMAESDENTYTSLIHLF---------CDQGQCDKAYKVFAEMIDTGFSPSVA 111
EEAL + DE+ T L ++F C QG+ D+A ++ ++M G P+V
Sbjct: 426 EEALKLF------DESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 112 TYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM 171
+YN ++L +CR K A + ++E+G +PN +++ L+ G + A E++ M
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 172 NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV-HKGILPDADTYGPLIGSLCLQQT 230
+ ++ Y ++I+ C G+ KA E+ A M+ K + +Y +I +
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599
Query: 231 LSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIS 290
+ A ++EM G+SP+ TYT LM+ + +A ++DEM +KG D
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI----- 654
Query: 291 TSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
Y A+I G C E A + + E GL+P Y+++I GF + + A L
Sbjct: 655 ---PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDL 711
Query: 351 KVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINY 410
+M K GL D+ T++ L+ L +G+L A L E+
Sbjct: 712 YKKMLKD--------GLRCDL-----------GTYTTLIDGLLKDGNLILASELYTEMQA 752
Query: 411 FDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFK 470
+P ++ Y+V +N L+KK + + + P +IY+ +I
Sbjct: 753 VGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV--TPNVLIYNAVI--------- 801
Query: 471 SVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLI 511
G G + +A R HD ML+ PDGA +++L+
Sbjct: 802 ------AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 158/327 (48%), Gaps = 14/327 (4%)
Query: 39 KGL-ADETTYNKLVLACCRDGRVEEALGILRGMAESDENT----YTSLIHLFCDQGQCDK 93
KGL + TY+ L+ C R+ + AL ++ M S+ Y ++I+ C GQ K
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 94 AYKVFAEMIDTG-FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALV 152
A ++ A MI+ S +YN+I+ + ++ A+ + G PN+I++ +L+
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 153 QGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL 212
G C +M++A E+ EM KG+ LD Y +LI FC + +E A + +E++ +G+
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 213 PDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHL 272
P Y LI + A DL+++ML+ GL D TYT L+ A L
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 273 QDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYS 332
EM G +PD + Y I++GL + + +++ M + ++P+ + Y+
Sbjct: 747 YTEMQAVGLVPD--------EIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798
Query: 333 TVIFGFCRIRELGKAYKLKVEMDKKSI 359
VI G R L +A++L EM K I
Sbjct: 799 AVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 129/541 (23%), Positives = 228/541 (42%), Gaps = 78/541 (14%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIH----LFCDQGQCDKAYKVFAEMI 102
+N L+ A +D + + A+ I+ M E D + ++ + +A ++++ M+
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
G T ++ A R+++ EAL +L IERG EP+ + ++ VQ C +
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285
Query: 163 EAEELLQEMNQKGLALDDK-TYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
A LL+EM +K L + + TYTS+I +G ++ A +K EM+ GI + L
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I C L A LF +M + G SP++ T++ L+ +R + KA +M G
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 282 LP---------------------------DFVTGISTSHVTYNAIIHGLCLLDRAEEALE 314
P F TG++ V N I+ LC + +EA E
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC-NTILSWLCKQGKTDEATE 464
Query: 315 ILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKS 374
+L M G+ P+ VSY+ V+ G CR + MD I + +
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQK----------NMDLARIVFSNI---------- 504
Query: 375 VMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVH---YSVFLNVLNKKA 431
+ +GL + +++ D H E+ L +N+ ++V+ Y +N L K
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNAL--EVVNHMTSSNIEVNGVVYQTIINGLCKVG 562
Query: 432 RITEAKHHLLWFI--SHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAA 489
+ ++A+ L I +C+ + + Y+++I+ GF G M A
Sbjct: 563 QTSKARELLANMIEEKRLCV---SCMSYNSIID---------------GFFKEGEMDSAV 604
Query: 490 RAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
A++ M P+ Y L+ C+ + +A +M EM + G + + ALI+
Sbjct: 605 AAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664
Query: 550 C 550
C
Sbjct: 665 C 665
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 140/298 (46%), Gaps = 13/298 (4%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAESDE-----NTYTSLIHLFCDQGQCDKAYKVFA 99
Y ++ C+ G+ +A +L M E +Y S+I F +G+ D A +
Sbjct: 549 VVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYE 608
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
EM G SP+V TY +++ C++ R +AL + + +G + ++ ++ AL+ GFC +
Sbjct: 609 EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
ME A L E+ ++GL Y SLI F N G + A ++ +M+ G+ D TY
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
LI L L A +L+ EM GL PD YT +++ + QF K + +EM
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
P+ + YNA+I G +EA + M + G+ PD ++ ++ G
Sbjct: 789 NVTPNVLI--------YNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 128/548 (23%), Positives = 225/548 (41%), Gaps = 86/548 (15%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE-----SDENTYTSLIHLFCDQGQCDKAYKV 97
D Y+ V ACC+ + A +LR M E + TYTS+I QG D A ++
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
EM+ G S +V +++ +C++ AL + + + G PN ++F+ L++ F
Sbjct: 327 KDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRK 386
Query: 158 KGKMEEAEELLQEMNQKGLA-------------------------LDDKTYTSLIHLF-- 190
G+ME+A E ++M GL D+ T L ++F
Sbjct: 387 NGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC 446
Query: 191 -------CNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
C +GK ++A E+ ++M +GI P+ +Y ++ C Q+ + A +F +L
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGL 303
+GL P+N TY+ L+ A + + M + I + V Y II+GL
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS--------SNIEVNGVVYQTIINGL 558
Query: 304 CLLDRAEEALEILRGM-PEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWL 362
C + + +A E+L M E L +SY+++I GF + E+ A EM IS
Sbjct: 559 CKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS-- 616
Query: 363 GLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVH-YS 421
+ T+++LM+ +++A + E+ + +D+ Y
Sbjct: 617 -----------------PNVITYTSLMNGLCKNNRMDQALEMRDEMKN-KGVKLDIPAYG 658
Query: 422 VFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGM 481
++ K++ + A ++ L+E N L+ GF
Sbjct: 659 ALIDGFCKRSNMESASA-----------------LFSELLEEGLNPSQPIYNSLISGFRN 701
Query: 482 RGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFS 541
G M A + +ML+ + D Y LI + GN+ A ++Y EM G P
Sbjct: 702 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEII 761
Query: 542 VLALIEAL 549
++ L
Sbjct: 762 YTVIVNGL 769
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 156/361 (43%), Gaps = 48/361 (13%)
Query: 40 GLADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAY 95
GLA+ N ++ C+ G+ +EA +L M + +Y +++ C Q D A
Sbjct: 439 GLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLAR 498
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
VF+ +++ G P+ TY+ ++ R+ + AL ++ + E N + + ++ G
Sbjct: 499 IVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGL 558
Query: 156 CGKGKMEEAEELL------------------------------------QEMNQKGLALD 179
C G+ +A ELL +EM G++ +
Sbjct: 559 CKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPN 618
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQ 239
TYTSL++ C ++++A EM+ EM +KG+ D YG LI C + + A LF
Sbjct: 619 VITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFS 678
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
E+L GL+P Y L+S +R A L +M+ G D TY +
Sbjct: 679 ELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDL--------GTYTTL 730
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
I GL A E+ M +GL PD + Y+ ++ G + + K K+ EM K ++
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 360 S 360
+
Sbjct: 791 T 791
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/552 (21%), Positives = 219/552 (39%), Gaps = 92/552 (16%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGIL-----RGMAESDENTYTSLIHLFCDQGQCDKAYK 96
D T L+ A R+ + EAL +L RG AE D Y+ + C A
Sbjct: 231 GDNVTTQLLMRASLREEKPAEALEVLSRAIERG-AEPDSLLYSLAVQACCKTLDLAMANS 289
Query: 97 VFAEMIDTGFS-PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
+ EM + PS TY +++LA + +A+ + ++ G N+++ +L+ G
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD- 214
C + A L +M ++G + + T++ LI F G++EKA E +M G+ P
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 215 -------------------------------ADTY--GPLIGSLCLQQTLSEAFDLFQEM 241
A+ + ++ LC Q EA +L +M
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM 469
Query: 242 LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIH 301
RG+ P+ +Y +M + Q A + ++ KG P+ + TY+ +I
Sbjct: 470 ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPN--------NYTYSILID 521
Query: 302 GLCLLDRAEE-ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL---KVEMDKK 357
G C + E+ ALE++ M + + V Y T+I G C++ + KA +L +E +
Sbjct: 522 G-CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL 580
Query: 358 SISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVD 417
+S + ++++++ + EG ++ A E+ P
Sbjct: 581 CVSCM---------------------SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 418 VHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVK 477
+ Y+ +N L K R+ +A + D + + + L+
Sbjct: 620 ITYTSLMNGLCKNNRMDQALE-----------------MRDEMKNKGVKLDIPAYGALID 662
Query: 478 GFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP 537
GF R M+ A+ +LE P +YN LI GN+ A D+Y +M+ G
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 722
Query: 538 HMFSVLALIEAL 549
+ + LI+ L
Sbjct: 723 DLGTYTTLIDGL 734
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY L+ +DG + A + M DE YT +++ +GQ K K+F
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
EM +P+V YNA++ + R+ EA + ++++G P+ +F+ LV G G
Sbjct: 783 EEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVG 841
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 157/321 (48%), Gaps = 12/321 (3%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENT----YTSLIHLFCDQGQCDKAYKVF 98
DE T+ L+ + GRV++A + M +SD T YTSLI F + G+ + +K++
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+MI+ SP + N + + + + + R F P+ S++ L+ G
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G E EL M ++G LD + Y +I FC GKV KA+++ EM KG P TY
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
G +I L L EA+ LF+E + + + Y+ L+ + + +A+ + +E++
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
KG P+ T+N+++ L + EAL + M E+ +P+ V+Y +I G
Sbjct: 686 KGLTPNL--------YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 339 CRIRELGKAYKLKVEMDKKSI 359
C++R+ KA+ EM K+ +
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGM 758
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/592 (23%), Positives = 245/592 (41%), Gaps = 93/592 (15%)
Query: 7 LFKTFLRNRVPPP----DVMIRGFAAA------WTETEKTNWKGLADETTYNKLVLACCR 56
+F+ +NR P + MI G+ +A ++ E+ KG +L C R
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLR 354
Query: 57 D-GRVEEALGILRGM---AESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVAT 112
G+V+EAL + M A + +TY LI + C G+ D A+++ M G P+V T
Sbjct: 355 KMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 113 YNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMN 172
N +V C+ ++ EA + + + P+ I+F +L+ G G++++A ++ ++M
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 173 QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKG---------------------- 210
+ YTSLI F N G+ E ++ +M+++
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 211 -------------ILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
+PDA +Y LI L +E ++LF M +G D + Y ++
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
+ + +KA+ L +EM KGF P + VTY ++I GL +DR +EA +
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEP--------TVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQ 377
+ + V YS++I GF ++ + +AY + E+ +K ++ LY
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT----PNLY--------- 693
Query: 378 GLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAK 437
T+++L+ + + +A + + + P V Y + +N L K + +A
Sbjct: 694 ------TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA- 746
Query: 438 HHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLE 497
+ W P+ I Y T+I GL K G + +A DR
Sbjct: 747 -FVFWQEMQKQGMKPSTISYTTMIS-----------GLAKA----GNIAEAGALFDRFKA 790
Query: 498 GNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
PD A YN +I A+ ++ E G H + + L++ L
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 137/565 (24%), Positives = 247/565 (43%), Gaps = 55/565 (9%)
Query: 21 VMIRGFA------AAWTETEKTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGMA-- 71
+IRGFA +A + ++ L AD YN + + + G+V+ A +
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN 267
Query: 72 --ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREA 129
+ DE TYTS+I + C + D+A ++F + P YN +++ Y +F EA
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 130 LGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHL 189
+L +G P++I++N ++ GK++EA ++ +EM +K A + TY LI +
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDM 386
Query: 190 FCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPD 249
C GK++ AFE++ M G+ P+ T ++ LC Q L EA +F+EM + +PD
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 250 NKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRA 309
T+ L+ + A+ + ++M+ + T+ + Y ++I R
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLD--------SDCRTNSIVYTSLIKNFFNHGRK 498
Query: 310 EEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM-------DKKSISWL 362
E+ +I + M SPD +T + + E K + E+ D +S S L
Sbjct: 499 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558
Query: 363 GLWGL---------YDDIDKSVMQGLSHEDTFSNLMSDYLAE-GHLEKAYLLEREINYFD 412
+ GL Y+ QG + N++ D + G + KAY L E+
Sbjct: 559 -IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 413 YLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSV 472
+ P V Y ++ L K R+ EA ++L+ + +IY +LI+
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEA--YMLFEEAKSKRIELNVVIYSSLID---------- 665
Query: 473 VGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVH 532
GFG G + +A + +++ P+ +N L+ + +++A + M
Sbjct: 666 -----GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 533 YGFAPHMFSVLALIEALCCVRRYNK 557
P+ + LI LC VR++NK
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNK 745
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 124/511 (24%), Positives = 222/511 (43%), Gaps = 55/511 (10%)
Query: 46 TYNKL--VLACCRD-GRVEEALGILR--GMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
+YN L V+A CR+ +++ LG + G S NT ++ + + Y V
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPS-VNTCIEMVLGCVKANKLREGYDVVQM 158
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M F P+ + Y ++ A+ L + + + E G+EP + F L++GF +G+
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
++ A LL EM L D Y I F GKV+ A++ E+ G+ PD TY
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
+IG LC L EA ++F+ + + P Y ++ Y +F +A+ L + KG
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
+P S + YN I+ L + + +EAL++ M + +P+ +Y+ +I CR
Sbjct: 339 SIP--------SVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCR 389
Query: 341 IRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGH-LE 399
+L A++L+ M K GL+ ++ ++V N+M D L + L+
Sbjct: 390 AGKLDTAFELRDSMQKA--------GLFPNV-RTV-----------NIMVDRLCKSQKLD 429
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
+A + E++Y P ++ + ++ L K R+ +A + +Y+
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA-----------------YKVYEK 472
Query: 460 LIE-NCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCG 518
+++ +C N L+K F G + + + M+ N PD + N + + G
Sbjct: 473 MLDSDCRTNSI-VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG 531
Query: 519 NVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
K M+ E+ F P S LI L
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 8/192 (4%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAES--DENTYT--SLIHLFCDQGQCDKAYKVFAEMI 102
Y+ L+ + GR++EA IL + + N YT SL+ + ++A F M
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+ +P+ TY ++ C+ ++F +A + + ++G +P+ IS+ ++ G G +
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
EA L G D Y ++I N + AF + E +G+ T L+
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Query: 223 GSL----CLQQT 230
+L CL+Q
Sbjct: 840 DTLHKNDCLEQA 851
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 29 AWTETEKTNWKGLADET-TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIH 83
A+ E+ KGL T+N L+ A + + EAL + M E ++ TY LI+
Sbjct: 676 AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILIN 735
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
C + +KA+ + EM G PS +Y ++ + EA + G P
Sbjct: 736 GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKA 199
+ +NA+++G + +A L +E ++GL + +KT L+ +E+A
Sbjct: 796 DSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 138/562 (24%), Positives = 241/562 (42%), Gaps = 85/562 (15%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
T+ ++ DG+V+ +L+ M E+ + S+I ++ G ++A ++F +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ G PSV YN ++ + R + + R + GFEPN+ ++N L++ C K+
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK----------------------- 198
+ A++LL EM+ KG D +YT++I C G V++
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLC 257
Query: 199 -------AFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
AFE+ EMV KGI P+ +Y LI LC + AF +ML+RG P+
Sbjct: 258 KEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
T + L+ L+ A L ++MI +GF G+ + V YN ++ G C +
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMI-RGF------GLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL-----------KVEMDKKSIS 360
A+ + M EIG SP+ +Y ++I GF + L A + V + +
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 361 WLGLWGLYDDIDKSVMQGLSHED------TFSNLMSDYLAEGHLEKAYLLEREINYFDYL 414
L + + + S+++ +S E+ TF+ + G L+ A + R++
Sbjct: 431 ALCRHSKFKEAE-SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 415 PVD-VHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTF--IIYDTLIENCSNNEFKS 471
P + V Y+ L+ L K RI EA + +R + Y+TL+ N
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEA----YGLTREIFMRGVEWSSSTYNTLLHGSCN----- 540
Query: 472 VVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMV 531
GL A + +M+ PD N++I +C+ G +A M +++V
Sbjct: 541 ----------AGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM-LDLV 589
Query: 532 HYG---FAPHMFSVLALIEALC 550
G + P + S +I LC
Sbjct: 590 SCGRRKWRPDVISYTNVIWGLC 611
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 162/334 (48%), Gaps = 17/334 (5%)
Query: 33 TEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDE---NTYTSLIHLFCDQG 89
E +N D +Y ++ + C G V+E R +AE E + Y +LI+ C +
Sbjct: 205 VEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----RELAERFEPVVSVYNALINGLCKEH 260
Query: 90 QCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFN 149
A+++ EM++ G SP+V +Y+ ++ C + A L +++RG PN+ + +
Sbjct: 261 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS 320
Query: 150 ALVQGFCGKGKMEEAEELLQEMNQK-GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH 208
+LV+G +G +A +L +M + GL + Y +L+ FC+ G + KA + + M
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSK 268
G P+ TYG LI + +L A ++ +ML G P+ YT ++ A ++F +
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440
Query: 269 AFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIG-LSPD 327
A L + M + P S T+NA I GLC R + A ++ R M + P+
Sbjct: 441 AESLIEIMSKENCAP--------SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPN 492
Query: 328 AVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISW 361
V+Y+ ++ G + + +AY L E+ + + W
Sbjct: 493 IVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 152/324 (46%), Gaps = 27/324 (8%)
Query: 22 MIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENT 77
MIRGF + YN LV C G + +A+ + M E + T
Sbjct: 342 MIRGFGLQ------------PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
Y SLI+ F +G D A ++ +M+ +G P+V Y +V A CR +F+EA ++ +
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDD-KTYTSLIHLFCNKGKV 196
+ P++ +FNA ++G C G+++ AE++ ++M Q+ + TY L+ ++
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
E+A+ + E+ +G+ + TY L+ C A L +M+ G SPD T +
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Query: 257 MSAYRLQAQFSKAFHLQDEMI--HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALE 314
+ AY Q + +A + D + + + PD ++ Y +I GLC + E+ +
Sbjct: 570 ILAYCKQGKAERAAQMLDLVSCGRRKWRPDVIS--------YTNVIWGLCRSNCREDGVI 621
Query: 315 ILRGMPEIGLSPDAVSYSTVIFGF 338
+L M G+ P ++S +I F
Sbjct: 622 LLERMISAGIVPSIATWSVLINCF 645
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 166/349 (47%), Gaps = 46/349 (13%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAE 100
+ YN L+ C++ + A ++R M E + +Y++LI++ C+ GQ + A+ +
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 101 MIDTGFSPSVATYNAIVLA-YCRDKRFREALGILRCLIERGF--EPNLISFNALVQGFCG 157
M+ G P++ T +++V + R F +AL + +I RGF +PN++++N LVQGFC
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTF-DALDLWNQMI-RGFGLQPNVVAYNTLVQGFCS 364
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
G + +A + M + G + + +TY SLI+ F +G ++ A + +M+ G P+
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYT----GLMSAYRLQAQFSKAFHLQ 273
Y ++ +LC EA L + M + +P T+ GL A RL +++ Q
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD--WAEKVFRQ 482
Query: 274 DEMIHKGFLPDFVT---------------------------GISTSHVTYNAIIHGLCLL 306
E H+ P+ VT G+ S TYN ++HG C
Sbjct: 483 MEQQHR-CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Query: 307 DRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMD 355
AL+++ M G SPD ++ + +I +C+ GKA + +D
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK---QGKAERAAQMLD 587
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 143/306 (46%), Gaps = 22/306 (7%)
Query: 46 TYNKLVLACCRDGRVEEALGI----LRGMA-ESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
T + LV C G +AL + +RG + + Y +L+ FC G KA VF+
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH 377
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M + G SP++ TY +++ + + A+ I ++ G PN++ + +V+ C K
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV---EKAFEMKAEMVHKGILPDADT 217
+EAE L++ M+++ A T+ + I C+ G++ EK F + E H+ P+ T
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR-QMEQQHR-CPPNIVT 495
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
Y L+ L + EA+ L +E+ RG+ + TY L+ A L +M+
Sbjct: 496 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMM 555
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIG---LSPDAVSYSTV 334
G PD +T N II C +AE A ++L + G PD +SY+ V
Sbjct: 556 VDGKSPD--------EITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISYTNV 606
Query: 335 IFGFCR 340
I+G CR
Sbjct: 607 IWGLCR 612
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 176/434 (40%), Gaps = 61/434 (14%)
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
F+ ++F +++ G+++ + LLQ+M +G + + S+I ++ G E+A
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
EM + G P Y ++ +L + + + ++++M R G P+ TY L+ A
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFV--TGISTSHV--------------------TYNA 298
+ A L EM +KG PD V T + +S YNA
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNA 251
Query: 299 IIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS 358
+I+GLC + A E++R M E G+SP+ +SYST+I C ++ A+ +M K+
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR- 310
Query: 359 ISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAY-LLEREINYFDYLPVD 417
G + +I T S+L+ G A L + I F P
Sbjct: 311 -------GCHPNI-----------YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNV 352
Query: 418 VHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIE-NCSNNEFKSVVGLV 476
V Y+ + I +A ++ + E CS N ++ L+
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVS-----------------VFSHMEEIGCSPN-IRTYGSLI 394
Query: 477 KGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFA 536
GF RG + A ++ML P+ VY ++ CR +A + M A
Sbjct: 395 NGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 537 PHMFSVLALIEALC 550
P + + A I+ LC
Sbjct: 455 PSVPTFNAFIKGLC 468
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 9/226 (3%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKVFAE 100
Y +V A CR + +EA ++ M++ + T+ + I CD G+ D A KVF +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 101 MIDTG-FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
M P++ TYN ++ + R EA G+ R + RG E + ++N L+ G C G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKG---ILPDAD 216
A +L+ +M G + D+ T +I +C +GK E+A +M ++V G PD
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM-LDLVSCGRRKWRPDVI 601
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRL 262
+Y +I LC + L + M+ G+ P T++ L++ + L
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFIL 647
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 150/320 (46%), Gaps = 12/320 (3%)
Query: 39 KGLADETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKA 94
K L D TY L+ C++ R++EA+ +L M Y LI C +G +
Sbjct: 217 KCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV 276
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
K+ M G P+ TYN ++ C + +A+ +L ++ PN +++ L+ G
Sbjct: 277 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLING 336
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
+ + +A LL M ++G L+ Y+ LI +GK E+A + +M KG P+
Sbjct: 337 LVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPN 396
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
Y L+ LC + +EA ++ M+ G P+ TY+ LM + +A +
Sbjct: 397 IVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWK 456
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
EM TG S + Y+ +I GLC + R +EA+ + M IG+ PD V+YS++
Sbjct: 457 EMDK--------TGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 335 IFGFCRIRELGKAYKLKVEM 354
I G C I + A KL EM
Sbjct: 509 IKGLCGIGSMDAALKLYHEM 528
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/481 (23%), Positives = 213/481 (44%), Gaps = 53/481 (11%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTG----FSPSVATYNAIVLAYCRDKRFREALGI 132
++ S++++ ++G + + + ++++ SP+ ++N ++ A C+ + A+ +
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 133 LRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCN 192
R + ER P+ ++ L+ G C + +++EA LL EM +G + Y LI C
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 193 KGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKT 252
KG + + ++ M KG +P+ TY LI LCL+ L +A L + M+ P++ T
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 253 YTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEA 312
Y L++ Q + + A L M +G+ + Y+ +I GL +AEEA
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGY--------HLNQHIYSVLISGLFKEGKAEEA 381
Query: 313 LEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDID 372
+ + R M E G P+ V YS ++ G CR + +A ++ ++
Sbjct: 382 MSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI--------------------LN 421
Query: 373 KSVMQG-LSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKA 431
+ + G L + T+S+LM + G E+A + +E++ YSV ++ L
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 432 RITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARA 491
R+ EA ++W P + Y ++I KG G M A +
Sbjct: 482 RVKEA--MMVWSKMLTIGIKPDTVAYSSII---------------KGLCGIGSMDAALKL 524
Query: 492 HDRML---EGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
+ ML E +PD YN+L+ C ++ +A D+ M+ G P + + +
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584
Query: 549 L 549
L
Sbjct: 585 L 585
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 150/311 (48%), Gaps = 15/311 (4%)
Query: 47 YNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
YN L+ C+ G + ++ M +E TY +LIH C +G+ DKA + M+
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+ P+ TY ++ + +R +A+ +L + ERG+ N ++ L+ G +GK E
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
EA L ++M +KG + Y+ L+ C +GK +A E+ M+ G LP+A TY L+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
EA +++EM + G S + Y+ L+ + +A + +M+ G
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM---PEIGLSPDAVSYSTVIFGFC 339
PD V Y++II GLC + + AL++ M E PD V+Y+ ++ G C
Sbjct: 500 PD--------TVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551
Query: 340 RIRELGKAYKL 350
+++ +A L
Sbjct: 552 MQKDISRAVDL 562
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 151/290 (52%), Gaps = 14/290 (4%)
Query: 58 GRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATY 113
G+ ++A+ + M E D ++ +++ + C + +KAY++F + FS TY
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTY 198
Query: 114 NAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQ 173
N I+ +C KR +AL +L+ ++ERG PNL ++N +++GF G++ A E EM +
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 174 KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSE 233
+ +D TYT+++H F G++++A + EM+ +G+LP TY +I LC + +
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318
Query: 234 AFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSH 293
A +F+EM+RRG P+ TY L+ +FS+ L M ++G P+F
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF-------- 370
Query: 294 VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG-FCRIR 342
TYN +I E+AL + M P+ +Y+ +I G F R R
Sbjct: 371 QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKR 420
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 20/287 (6%)
Query: 43 DETTYNKLVLACCRDGRVEEALGI---LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFA 99
D ++N ++ C+ RVE+A + LRG D TY +++ +C + KA +V
Sbjct: 160 DLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLK 219
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
EM++ G +P++ TYN ++ + R + R A + +R E +++++ +V GF G
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+++ A + EM ++G+ TY ++I + C K VE A M EMV +G P+ TY
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
LI L S +L Q M G P+ +TY ++ Y ++ KA L ++M
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSG 399
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE---------ALEILR 317
LP+ TYN +I G+ + R+E+ A EILR
Sbjct: 400 DCLPNL--------DTYNILISGMFVRKRSEDMVVAGNQAFAKEILR 438
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 120/250 (48%), Gaps = 9/250 (3%)
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEEL 167
PS T+ + Y + +A+ + + E G +L SFN ++ C ++E+A EL
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 168 LQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCL 227
+ + + ++D TY +++ +C + KA E+ EMV +GI P+ TY ++
Sbjct: 184 FRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 228 QQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
+ A++ F EM +R D TYT ++ + + + +A ++ DEMI +G LP
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLP---- 298
Query: 288 GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA 347
S TYNA+I LC D E A+ + M G P+ +Y+ +I G E +
Sbjct: 299 ----SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG 354
Query: 348 YKLKVEMDKK 357
+L M+ +
Sbjct: 355 EELMQRMENE 364
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 154/392 (39%), Gaps = 80/392 (20%)
Query: 167 LLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLC 226
L+ M + KT+ + + + GK +KA ++ M G D ++ ++ LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 227 LQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFV 286
+ + +A++LF+ + R
Sbjct: 173 KSKRVEKAYELFRALRGR------------------------------------------ 190
Query: 287 TGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGK 346
S VTYN I++G CL+ R +ALE+L+ M E G++P+ +Y+T++ GF R ++
Sbjct: 191 --FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 347 AYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLER 406
A++ +EM K+ D + V+ T++ ++ + G +++A +
Sbjct: 249 AWEFFLEMKKR------------DCEIDVV-------TYTTVVHGFGVAGEIKRARNVFD 289
Query: 407 EINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSN 466
E+ LP Y+ + VL KK + A ++++ ++
Sbjct: 290 EMIREGVLPSVATYNAMIQVLCKKDNVENA-----------------VVMFEEMVRRGYE 332
Query: 467 NEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDM 526
+ L++G G + RM +P+ YN++I + C V KA +
Sbjct: 333 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392
Query: 527 YMEMVHYGFAPHMFSVLALIEALCCVRRYNKM 558
+ +M P++ + LI + +R M
Sbjct: 393 FEKMGSGDCLPNLDTYNILISGMFVRKRSEDM 424
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 209/484 (43%), Gaps = 51/484 (10%)
Query: 60 VEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLA 119
V+ L I RG+ D + Y L QG K K+ EM G P+V Y +L
Sbjct: 185 VDYQLMISRGLV-PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILD 243
Query: 120 YCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD 179
CRD + EA + + + G PNL +++A++ G+C G + +A L +E+ L +
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQ 239
+ +L+ FC ++ A + MV G+ P+ Y LI C + EA L
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
EM LSPD TYT L++ ++ Q ++A L +M ++ P S TYN++
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP--------SSATYNSL 415
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
IHG C E+AL++ M G+ P+ +++ST+I G+C +R++ A L EM K
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK-- 473
Query: 360 SWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVH 419
G+ D+ T++ L+ + E ++++A L ++ P D
Sbjct: 474 ------GIVPDV-----------VTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516
Query: 420 YSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVG---LV 476
++ ++ K+ R++ A D EN + VG L+
Sbjct: 517 FACLVDGFWKEGRLSVA--------------------IDFYQENNQQRSCWNHVGFTCLI 556
Query: 477 KGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFA 536
+G G + +A+R M PD Y ++ H + + + +M+ G
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616
Query: 537 PHMF 540
P++
Sbjct: 617 PNLL 620
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 166/363 (45%), Gaps = 22/363 (6%)
Query: 13 RNRVPPPDVMIRGFAAAWTETEKTNWKGLADETT----------YNKLVLACCRDGRVEE 62
R VP + F + + + + L DE T Y +L CRD ++EE
Sbjct: 193 RGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEE 252
Query: 63 ALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVL 118
A + M + + TY+++I +C G +AY ++ E++ P+V + +V
Sbjct: 253 AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 119 AYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLAL 178
+C+ + A + +++ G +PNL +N L+ G C G M EA LL EM L+
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 179 DDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLF 238
D TYT LI+ C + +V +A + +M ++ I P + TY LI C + + +A DL
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 239 QEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNA 298
EM G+ P+ T++ L+ Y A L EM KG +PD VTY A
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDV--------VTYTA 484
Query: 299 IIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS 358
+I +EAL + M E G+ P+ +++ ++ GF + L A E +++
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Query: 359 ISW 361
W
Sbjct: 545 SCW 547
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 137/304 (45%), Gaps = 40/304 (13%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
YN L+ C+ G + EA+G+L M D TYT LI+ C + Q +A ++F +M
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ PS ATYN+++ YC++ +AL + + G EPN+I+F+ L+ G+C +
Sbjct: 401 KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+ A L EM KG+ D TYT+LI + +++A + ++M+ GI P+ T+ L
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACL 520
Query: 222 IGSLCLQQTLSEAFDLFQE-----------------------------------MLRRGL 246
+ + LS A D +QE M G+
Sbjct: 521 VDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGI 580
Query: 247 SPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD-FVTGISTSHVTYNAIIHGLCL 305
+PD +Y ++ + + + + LQ +MI G LP+ V + N + C
Sbjct: 581 TPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACF 640
Query: 306 LDRA 309
L +
Sbjct: 641 LTNS 644
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 194/478 (40%), Gaps = 55/478 (11%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
++ LI F + G ++A V EM SP +I+ R +RF + +
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
I RG P++ + L Q +G + E+LL EM G+ + YT I C K+
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
E+A +M M G+LP+ TY +I C + +A+ L++E+L L P+ + L
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
+ + + A L M+ G P+ YN +IHG C EA+ +L
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNL--------YVYNCLIHGHCKSGNMLEAVGLL 362
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVM 376
M + LSPD +Y+ +I G C ++ +A +L +M + I
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI----------------- 405
Query: 377 QGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFL----NVLNKKAR 432
T+++L+ Y E ++E+A L E+ P + +S + NV + KA
Sbjct: 406 --FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 433 ITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAH 492
+ L+F + +P + Y LI+ FK MK+A R +
Sbjct: 464 MG------LYFEMTIKGIVPDVVTYTALID----AHFK-----------EANMKEALRLY 502
Query: 493 DRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
MLE P+ + L+ + G + A D Y E + LIE LC
Sbjct: 503 SDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC 560
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 153/317 (48%), Gaps = 15/317 (4%)
Query: 40 GLADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAY 95
G+ D TYN ++ C+ G + AL +L M+ S D TY ++I D G ++A
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
+ + + + G P + TY +V CR A+ +L + G P+++++N+LV
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYN 289
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
C +G +EE ++Q + GL L+ TY +L+H C+ ++ E+ M P
Sbjct: 290 CRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTV 349
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
TY LI LC + LS A D F +ML + PD TY ++ A + A L
Sbjct: 350 ITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL-- 407
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
G L + T +TYN++I GL ++ALE+ M + G+ PD ++ ++I
Sbjct: 408 ----GLLKN--TCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI 461
Query: 336 FGFCR---IRELGKAYK 349
+GFCR + E G+ K
Sbjct: 462 YGFCRANLVEEAGQVLK 478
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 193/482 (40%), Gaps = 81/482 (16%)
Query: 70 MAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREA 129
+ E+DE T ++H C G+ A K+ M P + + +V R + +A
Sbjct: 99 ITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKA 158
Query: 130 LGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHL 189
+ ILR ++ G P+ I++N ++ C KG + A LL++M+ G D TY ++I
Sbjct: 159 MCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRC 218
Query: 190 FCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPD 249
+ G E+A + + G P TY L+ +C + A ++ ++M G PD
Sbjct: 219 MFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPD 278
Query: 250 NKTYTGLMSAYRLQAQFSK-AFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDR 308
TY L++ + + A +Q + H G+ + VTYN ++H LC +
Sbjct: 279 IVTYNSLVNYNCRRGNLEEVASVIQHILSH---------GLELNTVTYNTLLHSLCSHEY 329
Query: 309 AEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLY 368
+E EIL M + P ++Y+ +I G C+ R L +A +M
Sbjct: 330 WDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQM-------------- 375
Query: 369 DDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLN 428
LE+ L P V Y+ L ++
Sbjct: 376 -----------------------------LEQKCL-----------PDIVTYNTVLGAMS 395
Query: 429 KKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKA 488
K+ + +A LL + + C P I Y+++I+ G +GLMKKA
Sbjct: 396 KEGMVDDAI-ELLGLLKNTCCP-PGLITYNSVID---------------GLAKKGLMKKA 438
Query: 489 ARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
+ +ML+ PD LI+ CR V +A + E + G + +I+
Sbjct: 439 LELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQG 498
Query: 549 LC 550
LC
Sbjct: 499 LC 500
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 146/330 (44%), Gaps = 21/330 (6%)
Query: 10 TFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRG 69
T LR RV P G ++ TE DE T N+++ C +G++ +A ++
Sbjct: 79 TNLRARVKPMKQF--GLSSDGPITEN-------DEETNNEILHNLCSNGKLTDACKLVEV 129
Query: 70 MAESDENTY----TSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKR 125
MA ++ + ++L+ Q DKA + M+ +G P TYN I+ C+
Sbjct: 130 MARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGH 189
Query: 126 FREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTS 185
R AL +L + G P++I++N +++ G E+A ++ Q G TYT
Sbjct: 190 IRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTV 249
Query: 186 LIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
L+ L C +A E+ +M +G PD TY L+ C + L E + Q +L G
Sbjct: 250 LVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHG 309
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCL 305
L + TY L+ + + + + + M + P +TYN +I+GLC
Sbjct: 310 LELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTV--------ITYNILINGLCK 361
Query: 306 LDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
A++ M E PD V+Y+TV+
Sbjct: 362 ARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 12/275 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TYN LV CR G +EE +++ + E + TY +L+H C D+ ++
Sbjct: 278 DIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL 337
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M T + P+V TYN ++ C+ + A+ ++E+ P+++++N ++ +
Sbjct: 338 NIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKE 397
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G +++A ELL + TY S+I KG ++KA E+ +M+ GI PD T
Sbjct: 398 GMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITR 457
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C + EA + +E RG TY ++ + + A + + M+
Sbjct: 458 RSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLT 517
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
G PD Y AI+ G+ + EA+
Sbjct: 518 GGCKPD--------ETIYTAIVKGVEEMGMGSEAV 544
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 148/313 (47%), Gaps = 22/313 (7%)
Query: 64 LGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRD 123
+G++ + TY++ I FC G+ A K F M SP+V T+ ++ YC+
Sbjct: 152 MGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKA 211
Query: 124 KRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTY 183
A+ + + + N++++ AL+ GFC KG+M+ AEE+ M + + + Y
Sbjct: 212 GDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVY 271
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
T++I F +G + A + A+M+++G+ D YG +I LC L EA ++ ++M +
Sbjct: 272 TTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEK 331
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT------GIS------- 290
L PD +T +M+AY + A ++ ++I +GF PD V GI+
Sbjct: 332 SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391
Query: 291 ---------TSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
+ V Y +I LC E + + E GL PD Y++ I G C+
Sbjct: 392 AIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451
Query: 342 RELGKAYKLKVEM 354
L A+KLK M
Sbjct: 452 GNLVDAFKLKTRM 464
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 131/550 (23%), Positives = 232/550 (42%), Gaps = 84/550 (15%)
Query: 60 VEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNA 115
V EAL L + +S D T IH + + K A ++ G++P +++N+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 116 IVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKG 175
+V C+ + + A I+ + G EP++IS+N+L+ G C G + A +L+ +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 176 LAL---DDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLS 232
+ D ++ SL + F +++ F M+ K P+ TY I + C L
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 233 EAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTS 292
A F M R LSP+ T+T L+ Y A L EM +S +
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR--------VRMSLN 232
Query: 293 HVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK--- 349
VTY A+I G C + A E+ M E + P+++ Y+T+I GF + + A K
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 350 ------LKVEMDKKSISWLGLWG---------LYDDIDKSVMQGLSHEDTFSNLMSDYLA 394
+++++ + GL G + +D++KS + + F+ +M+ Y
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL--VPDMVIFTTMMNAYFK 350
Query: 395 EGHLEKAY-----LLER------------------------EINYFDYLPV-DVHYSVFL 424
G ++ A L+ER I YF DV Y+V +
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLI 410
Query: 425 NVLNKK----------ARITEA-----KHHLLWFISHVCLR---MPTFIIYDTLIENCSN 466
+ L K+ ++I+EA K +I+ +C + + F + +++
Sbjct: 411 DALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL 470
Query: 467 NEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDM 526
+ + L+ G +GLM +A + D ML PD AV++LLI + + GN+ A D+
Sbjct: 471 LDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDL 530
Query: 527 YMEMVHYGFA 536
++M G
Sbjct: 531 LLDMQRRGLV 540
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 13/252 (5%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKVF 98
D T Y ++ C +G+++EA I+ M +SD +T++++ + G+ A ++
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
++I+ GF P V + ++ ++ + EA I+ IE+ N + + L+ C +
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEA--IVYFCIEKA---NDVMYTVLIDALCKE 416
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G E E L ++++ GL D YTS I C +G + AF++K MV +G+L D Y
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAY 476
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI L + + EA +F EML G+SPD+ + L+ AY + + A L +M
Sbjct: 477 TTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQR 536
Query: 279 KGFLPDFVTGIS 290
+G VT +S
Sbjct: 537 RG----LVTAVS 544
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/571 (22%), Positives = 236/571 (41%), Gaps = 105/571 (18%)
Query: 90 QCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFN 149
Q + A ++ + ++D G +P+V T+ ++ +C+ A + + + +RG EP+LI+++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 150 ALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK 209
L+ G+ G + +L + KG+ LD ++S I ++ G + A + M+ +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 210 GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKA 269
GI P+ TY LI LC + EAF ++ ++L+RG+ P TY+ L+ +
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 270 FHLQDEMIHKGFLPDFVT---------------------------GISTSHVTYNAIIHG 302
F L ++MI G+ PD V I + V +N++I G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 303 LCLLDRAEEALEILRGM------PEI-----------------------------GLSPD 327
C L+R +EAL++ R M P++ GL PD
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 328 AVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS-----------WLGLWGLYDDIDK--- 373
A++Y T+I FC+ + +L M + IS L +D K
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 374 SVMQGLSHED--TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKA 431
++++G D T++ ++ Y + L++A + + + P V ++ ++VL K
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 685
Query: 432 RITEAKHH-------------------LLWFISHVCLRMPTFIIYDTLIENCSNNEFKSV 472
+ A + WF V + +F +++ + E + S
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE-GSFKLFEEMQEKGISPSIVSY 744
Query: 473 VGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVH 532
++ G RG + +A + ++ PD Y +LI +C+ G + +A +Y M+
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR 804
Query: 533 YGFAPHMFSVLALIEALCCVRRYNKMSWVIQ 563
G P AL E YN W++
Sbjct: 805 NGVKPDDLLQRALSE-------YNPPKWLMS 828
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/571 (21%), Positives = 235/571 (41%), Gaps = 87/571 (15%)
Query: 50 LVLACCRDGRVEEALGILR-----GMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDT 104
L+ CCR G V++AL I G+ ++ Y L L + D F ++
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI-GSDRVDLIADHFDKLCRG 210
Query: 105 GFSPSVATYNAIVL--AYCRDKRFREALGILRCLIERGFE-------------------- 142
G PS + + VL +C+ + +AL R ++ERGF
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGE-VTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEV 269
Query: 143 --------------PNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
PN+++F L+ GFC +G+M+ A +L + M Q+G+ D Y++LI
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 189 LFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
+ G + ++ ++ +HKG+ D + I L+ A +++ ML +G+SP
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDR 308
+ TYT L+ + +AF + +++ +G P S VTY+++I G C
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP--------SIVTYSSLIDGFCKCGN 441
Query: 309 AEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI--------S 360
+ M ++G PD V Y ++ G + + A + V+M +SI S
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 361 WLGLWGLYDDIDKSV-------MQGLSHE-DTFSNLMSDYLAEGHLEKAYLLEREINYFD 412
+ W + D+++ + G+ + TF+ +M + EG LE+A L +
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 413 YLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSV 472
P + Y ++ K + T ++D + N + +
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQ-----------------LFDLMQRNKISADIAVC 604
Query: 473 VGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVH 532
++ ++ A++ + ++EG +PD YN +I +C + +A ++ +
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 533 YGFAPHMFSVLALIEALCCVRRYNKMSWVIQ 563
F P+ ++ LI LC + N M I+
Sbjct: 665 TPFGPNTVTLTILIHVLC---KNNDMDGAIR 692
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 12/289 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
D T+ ++ +GR+EEAL + M E D Y +LI FC + ++F
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M S +A N ++ + R +A LIE EP+++++N ++ G+C
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
+++EAE + + + + T T LIH+ C ++ A M + M KG P+A TY
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
G L+ + +F LF+EM +G+SP +Y+ ++ + + +A ++ + I
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPD 327
LPD V Y +I G C + R EA + M G+ PD
Sbjct: 770 AKLLPDV--------VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 108/213 (50%), Gaps = 4/213 (1%)
Query: 42 ADETTYNKLVLACCRDGRVEEAL----GILRGMAESDENTYTSLIHLFCDQGQCDKAYKV 97
AD N ++ + R+E+A ++ G E D TY ++I +C + D+A ++
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
F + T F P+ T ++ C++ A+ + + E+G +PN +++ L+ F
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+E + +L +EM +KG++ +Y+ +I C +G+V++A + + + +LPD
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDN 250
Y LI C L EA L++ MLR G+ PD+
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 148/302 (49%), Gaps = 13/302 (4%)
Query: 44 ETTYNKLVLACCRDGRVEEALGILRGM-----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
E + + A CR +++ AL M + + Y ++++ + G DKA + +
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M P V T+N ++ YCR +F AL + R + E+G EPN++SFN L++GF
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+EE ++ EM + G + T L+ C +G+V+ A + ++++K +LP Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
G L+ LC + A ++ +E+ ++G +P T L+ R + KA ++M++
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
G LPD VT+N ++ LC D + +A + G PD +Y ++ GF
Sbjct: 397 AGILPD--------SVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Query: 339 CR 340
+
Sbjct: 449 TK 450
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 12/269 (4%)
Query: 39 KGLADETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKA 94
+ D T+N L+ CR + + AL + R M E + ++ +LI F G+ ++
Sbjct: 223 RAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEG 282
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
K+ EMI+ G S AT +V CR+ R +A G++ L+ + P+ + +LV+
Sbjct: 283 VKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEK 342
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
CG+ K A E+++E+ +KG T+L+ G+ EKA +M++ GILPD
Sbjct: 343 LCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPD 402
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
+ T+ L+ LC ++A L +G PD TY L+S + + + + L +
Sbjct: 403 SVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVN 462
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGL 303
EM+ K LPD TYN ++ GL
Sbjct: 463 EMLDKDMLPDI--------FTYNRLMDGL 483
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 143/328 (43%), Gaps = 32/328 (9%)
Query: 113 YNAIVLAYCRDKRFREAL---GILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
+ + + AYCR ++ AL ++ LI+ +PN+ +N +V G+ G M++A Q
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 170 EMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQ 229
M ++ D T+ LI+ +C K + A ++ EM KG P+ ++ LI
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 230 TLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGI 289
+ E + EM+ G T L+ + + A L ++++K LP
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLP------ 331
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
S Y +++ LC ++A A+E++ + + G +P ++ +T++ G +R+ G+ K
Sbjct: 332 --SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEG---LRKSGRTEK 386
Query: 350 LKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREIN 409
M+K + + L D + TF+ L+ D + H A L +
Sbjct: 387 ASGFMEKMMNAGI----LPDSV------------TFNLLLRDLCSSDHSTDANRLRLLAS 430
Query: 410 YFDYLPVDVHYSVFLNVLNKKARITEAK 437
Y P + Y V ++ K+ R E +
Sbjct: 431 SKGYEPDETTYHVLVSGFTKEGRRKEGE 458
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 115/308 (37%), Gaps = 54/308 (17%)
Query: 234 AFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSH 293
AFD + ++ P+ Y +++ Y KA M + PD T
Sbjct: 179 AFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCT------ 230
Query: 294 VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVE 353
+N +I+G C + + AL++ R M E G P+ VS++T+I GF ++ + K+ E
Sbjct: 231 --FNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYE 288
Query: 354 MDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLA-EGHLEKAYLLEREINYFD 412
M + G + ++ D L EG ++ A L ++
Sbjct: 289 M--------------------IELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKR 328
Query: 413 YLPVDVHYSVFLNVL---NKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEF 469
LP + Y + L NK R E LW P FI TL+E
Sbjct: 329 VLPSEFDYGSLVEKLCGENKAVRAMEMMEE-LWKKGQT----PCFIACTTLVE------- 376
Query: 470 KSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYME 529
G G +KA+ ++M+ PD +NLL+ D C + A + +
Sbjct: 377 --------GLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLL 428
Query: 530 MVHYGFAP 537
G+ P
Sbjct: 429 ASSKGYEP 436
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 187/408 (45%), Gaps = 44/408 (10%)
Query: 50 LVLACCRD-GRVE---EALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKVFAEM 101
++L+ CR GRV ++L + M + D + Y +++ + ++ Q + A+K + M
Sbjct: 88 ILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNM 147
Query: 102 IDTGFSPSVATYNAIVLAYCR-DKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
+ G P+VA+ N ++ A CR D L I + +RG +P+ ++ L+ G C G+
Sbjct: 148 REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGR 207
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
++EA++L EM +K A TYTSLI+ C V++A EM KGI P+ TY
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSS 267
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
L+ LC +A +LF+ M+ RG P+ TYT L++ + + +A L D M +G
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST------- 333
PD G+ Y +I G C + + EA L M G++P+ ++++
Sbjct: 328 LKPD--AGL------YGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNE 379
Query: 334 VIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYL 393
V+ G C +A+ L + M + IS +T +L+
Sbjct: 380 VVRGLC-ANYPSRAFTLYLSMRSRGIS-------------------VEVETLESLVKCLC 419
Query: 394 AEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLL 441
+G +KA L EI +P + + + K + EA LL
Sbjct: 420 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLL 467
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 126/252 (50%), Gaps = 12/252 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKVF 98
D TY L+ CR GR++EA + M E D TYTSLI+ C D+A +
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYL 250
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM G P+V TY++++ C+D R +A+ + ++ RG PN++++ L+ G C +
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD---- 214
K++EA ELL MN +GL D Y +I FC K +A EM+ GI P+
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Query: 215 ---ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
T ++ LC S AF L+ M RG+S + +T L+ + +F KA
Sbjct: 371 NIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQ 429
Query: 272 LQDEMIHKGFLP 283
L DE++ G +P
Sbjct: 430 LVDEIVTDGCIP 441
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 149/306 (48%), Gaps = 29/306 (9%)
Query: 46 TYNKLVLACCR-DGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
+ N L+ A CR DG V+ L I M + D TY +LI C G+ D+A K+F E
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M++ +P+V TY +++ C K EA+ L + +G EPN+ ++++L+ G C G+
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+A EL + M +G + TYT+LI C + K+++A E+ M +G+ PDA YG
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPD-----------NKTYTGLMSAYRLQAQFSKA 269
+I C EA + EM+ G++P+ N+ GL + Y S+A
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-----SRA 392
Query: 270 FHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAV 329
F L M + GIS T +++ LC ++A++++ + G P
Sbjct: 393 FTLYLSMRSR--------GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKG 444
Query: 330 SYSTVI 335
++ +I
Sbjct: 445 TWKLLI 450
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 168/421 (39%), Gaps = 78/421 (18%)
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
+ +VF +M D PS Y ++ + + A + + E G P + S N L++
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
C N G V+ ++ EM +G P
Sbjct: 165 ALCR----------------------------------NDGTVDAGLKIFLEMPKRGCDP 190
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
D+ TYG LI LC + EA LF EM+ + +P TYT L++ +A
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYL 250
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
+EM KG P+ T Y++++ GLC R+ +A+E+ M G P+ V+Y+T
Sbjct: 251 EEMKSKGIEPNVFT--------YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 334 VIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHE-DTFSNLMSDY 392
+I G C+ +++ +A +L +D+ +QGL + + ++S +
Sbjct: 303 LITGLCKEQKIQEAVEL--------------------LDRMNLQGLKPDAGLYGKVISGF 342
Query: 393 LAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMP 452
A +A E+ P + +++ + N+ R +C P
Sbjct: 343 CAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVR-------------GLCANYP 389
Query: 453 T--FIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLL 510
+ F +Y ++ + E +++ LVK +G +KA + D ++ P + LL
Sbjct: 390 SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Query: 511 I 511
I
Sbjct: 450 I 450
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 153/384 (39%), Gaps = 57/384 (14%)
Query: 233 EAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTS 292
++ +F +M P K Y +++ + Q + AF M G P +
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPP--------T 155
Query: 293 HVTYNAIIHGLCLLDRAEEA-LEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLK 351
+ N +I LC D +A L+I MP+ G PD+ +Y T+I G CR + +A KL
Sbjct: 156 VASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLF 215
Query: 352 VEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYF 411
EM +K D +V+ T+++L++ ++++A E+
Sbjct: 216 TEMVEK------------DCAPTVV-------TYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Query: 412 DYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFK 470
P YS ++ L K R +A ++ C P + Y TLI C + +
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGC--RPNMVTYTTLITGLCKEQKIQ 314
Query: 471 SVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEM 530
V L+ ++GL KPD +Y +I C +A + EM
Sbjct: 315 EAVELLDRMNLQGL----------------KPDAGLYGKVISGFCAISKFREAANFLDEM 358
Query: 531 VHYGFAP-------HMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLN-DSELLQVLNE 582
+ G P H+ + ++ LC Y ++ + ++RS ++ + E L+ L +
Sbjct: 359 ILGGITPNRLTWNIHVKTSNEVVRGLCA--NYPSRAFTLYLSMRSRGISVEVETLESLVK 416
Query: 583 IDVREGQTEYLRGELAERAMDGLL 606
++G+ + + E DG +
Sbjct: 417 CLCKKGEFQKAVQLVDEIVTDGCI 440
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 149/608 (24%), Positives = 254/608 (41%), Gaps = 94/608 (15%)
Query: 5 RVLFKTFLRNRVPPPDVMI-RGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEA 63
++L + LR R P V I R + E D ++ V A C+ + A
Sbjct: 243 QLLMRASLRERKPEEAVKIFRRVMSRGAE---------PDGLLFSLAVQAACKTPDLVMA 293
Query: 64 LGILRGM-----AESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVL 118
L +LR M + + TYTS+I F +G ++A +V EM+ G SV ++V
Sbjct: 294 LDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVN 353
Query: 119 AYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLAL 178
YC+ +AL + + E G P+ + F+ +V+ FC +ME+A E M +A
Sbjct: 354 GYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAP 413
Query: 179 DDKTYTSLIH----------------------------------LFCNKGKVEKAFEMKA 204
++I LFC +GKV+ A
Sbjct: 414 SSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLK 473
Query: 205 EMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQA 264
M KGI P+ Y ++ + C + + A +F EML +GL P+N TY+ L+ +
Sbjct: 474 MMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Query: 265 QFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM-PEIG 323
A+ + ++M F + V YN II+GLC + + +A E+L+ + E
Sbjct: 534 DEQNAWDVINQMNASNF--------EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKR 585
Query: 324 LSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDK--KSISWLGLWGLYDDIDKSVMQGLSH 381
S SY+++I GF ++ + A + EM + KS + + L + KS L+
Sbjct: 586 YSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLAL 645
Query: 382 EDT--------------FSNLMSDYLAEGHLEKAYLLEREINYFDYLP-VDVHYSV---F 423
E T + L+ + + ++ AY L E+ +P V V+ S+ F
Sbjct: 646 EMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF 705
Query: 424 LNVLNKKARITEAKHHLLWFISHVCLRMPTFI--------------IYDTLIE-NCSNNE 468
N+ A I K + IS T I +Y L++ +E
Sbjct: 706 RNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDE 765
Query: 469 FKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYM 528
+V LV G +G KA++ + M + + P+ +Y+ +I H R GN+++A+ ++
Sbjct: 766 ILHMV-LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHD 824
Query: 529 EMVHYGFA 536
EM+ G
Sbjct: 825 EMLEKGIV 832
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 185/430 (43%), Gaps = 47/430 (10%)
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
LFC QG+ D A M G P+V YN ++LA+CR K A I ++E+G EP
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
N +++ L+ GF + A +++ +MN ++ Y ++I+ C G+ KA EM
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 204 AEMV-HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRL 262
++ K +Y +I A + ++EM G SP+ T+T L++ +
Sbjct: 578 QNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCK 637
Query: 263 QAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEI 322
+ A + EM D Y A+I G C + + A + +PE+
Sbjct: 638 SNRMDLALEMTHEMKSMELKLDL--------PAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 323 GLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHE 382
GL P+ Y+++I GF R LGK MD D K V G+S +
Sbjct: 690 GLMPNVSVYNSLISGF---RNLGK-------MD----------AAIDLYKKMVNDGISCD 729
Query: 383 -DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLL 441
T++ ++ L +G++ A L E+ +P ++ + V +N L+KK + +A L
Sbjct: 730 LFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLE 789
Query: 442 WFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYK 501
P ++Y T+I G G + +A R HD MLE
Sbjct: 790 EMKKKDV--TPNVLLYSTVI---------------AGHHREGNLNEAFRLHDEMLEKGIV 832
Query: 502 PDGAVYNLLI 511
D V+NLL+
Sbjct: 833 HDDTVFNLLV 842
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 26/366 (7%)
Query: 1 MKLLRVLFKTFLRNRVPPPD----VMIRGF------AAAWTETEKTNWKGL-ADETTYNK 49
M L R +F L + P + ++I GF AW + N A+E YN
Sbjct: 500 MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNT 559
Query: 50 LVLACCRDGRVEEALGILRGMAESDE-----NTYTSLIHLFCDQGQCDKAYKVFAEMIDT 104
++ C+ G+ +A +L+ + + +Y S+I F G D A + + EM +
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSEN 619
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
G SP+V T+ +++ +C+ R AL + + + +L ++ AL+ GFC K M+ A
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA 679
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
L E+ + GL + Y SLI F N GK++ A ++ +MV+ GI D TY +I
Sbjct: 680 YTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
L ++ A DL+ E+L G+ PD + L++ + QF KA + +EM K P+
Sbjct: 740 LLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPN 799
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL 344
+ Y+ +I G EA + M E G+ D ++ ++ G R+ +
Sbjct: 800 V--------LLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG--RVEKP 849
Query: 345 GKAYKL 350
A K+
Sbjct: 850 PAASKI 855
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 130/578 (22%), Positives = 224/578 (38%), Gaps = 96/578 (16%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAESD--------ENTYTSLIHLFCDQGQCDKAYKVF 98
+N L+ A R+ R++ A+ M + N +SL+ D+A +++
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVR----SNLIDEAKEIY 227
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+M+ G + T ++ A R+++ EA+ I R ++ RG EP+ + F+ VQ C
Sbjct: 228 NKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKT 287
Query: 159 GKMEEAEELLQEMNQK-GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+ A +LL+EM K G+ +TYTS+I F +G +E+A + EMV GI
Sbjct: 288 PDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIA 347
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
L+ C L +A DLF M GL+PD ++ ++ + + KA M
Sbjct: 348 ATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK 407
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI---------------------- 315
I+ S V + +I G + E ALEI
Sbjct: 408 S--------VRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF 459
Query: 316 ------------LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLG 363
L+ M + G+ P+ V Y+ ++ CR++ + A + EM +K +
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLE--- 516
Query: 364 LWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVF 423
+ T+S L+ + + A+ + ++N ++ +V Y+
Sbjct: 517 ----------------PNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTI 560
Query: 424 LNVLNKKARITEAKHHLLWFI-----SHVCLRMPTFI--------------IYDTLIENC 464
+N L K + ++AK L I S C + I Y + EN
Sbjct: 561 INGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Query: 465 SNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAY 524
+ + L+ GF M A M K D Y LI C+ ++ AY
Sbjct: 621 KSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAY 680
Query: 525 DMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVI 562
++ E+ G P++ +LI R KM I
Sbjct: 681 TLFSELPELGLMPNVSVYNSLISGF---RNLGKMDAAI 715
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 198/435 (45%), Gaps = 25/435 (5%)
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
GF + +N ++ AY R+KR A+ +++R P + N ++ ++EA
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
+E+ +M G+A D+ T L+ + K E+A ++ ++ +G PD + + +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 225 LCLQQTLSEAFDLFQEML-RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
C L A DL +EM + G+ +TYT ++ A+ + +A + DEM+ GF
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV--GF-- 339
Query: 284 DFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRE 343
GI S + ++++G C + +AL++ M E GL+PD V +S ++ FC+ E
Sbjct: 340 ----GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNME 395
Query: 344 LGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHE---DTFSNLMSDYLAEGHL-E 399
+ KA + + M KS+ L + + ++ S E + F++ ++A G +
Sbjct: 396 MEKAIEFYMRM--KSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCN 453
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR---MPTFII 456
K +LL + VD S FL ++ +K + ++H ++ + I
Sbjct: 454 KIFLL-----FCKQGKVDAATS-FLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIF 507
Query: 457 YDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCR 516
+ L + N F + L+ GF + A ++M N++ + +YN +I C+
Sbjct: 508 SEMLEKGLEPNNFTYSI-LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCK 566
Query: 517 CGNVHKAYDMYMEMV 531
G KA +M ++
Sbjct: 567 VGQTSKAKEMLQNLI 581
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 146/284 (51%), Gaps = 10/284 (3%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
+ L+ F KA +V EM G P + ++ A C++ +EA + +
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR 229
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
E+ F PNL F +L+ G+C +GK+ EA+E+L +M + GL D +T+L+ + + GK+
Sbjct: 230 EK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLC-LQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
A+++ +M +G P+ + Y LI +LC ++ + EA +F EM R G D TYT L
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
+S + K + + D+M KG +P S VTY I+ ++ EE LE++
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMP--------SQVTYMQIMVAHEKKEQFEECLELI 400
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
M G PD + Y+ VI C++ E+ +A +L EM+ +S
Sbjct: 401 EKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLS 444
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 11/274 (4%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
+ L+ CR+G++ EA +L M E+ D +T+L+ + G+ AY + +M
Sbjct: 239 FTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR 298
Query: 103 DTGFSPSVATYNAIVLAYCR-DKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
GF P+V Y ++ A CR +KR EA+ + + G E +++++ AL+ GFC G +
Sbjct: 299 KRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMI 358
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
++ +L +M +KG+ TY ++ K + E+ E+ +M +G PD Y +
Sbjct: 359 DKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I C + EA L+ EM GLSP T+ +++ + Q +A + EM+ +G
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
+ + T ++++ L D+ E A ++
Sbjct: 479 FS------APQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 7/199 (3%)
Query: 47 YNKLVLACCR-DGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
Y L+ A CR + R++EA+ + M E+D TYT+LI FC G DK Y V +M
Sbjct: 309 YTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM 368
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G PS TY I++A+ + ++F E L ++ + RG P+L+ +N +++ C G++
Sbjct: 369 RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEV 428
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL--PDADTYG 219
+EA L EM GL+ T+ +I+ F ++G + +A EMV +GI P T
Sbjct: 429 KEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLK 488
Query: 220 PLIGSLCLQQTLSEAFDLF 238
L+ +L L A D++
Sbjct: 489 SLLNNLVRDDKLEMAKDVW 507
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 137/306 (44%), Gaps = 13/306 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFC-DQGQCDKAYKV 97
D + L+ G++ +A ++ M E + N YT LI C + + D+A +V
Sbjct: 270 DIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRV 329
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
F EM G + TY A++ +C+ + +L + ++G P+ +++ ++
Sbjct: 330 FVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEK 389
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
K + EE EL+++M ++G D Y +I L C G+V++A + EM G+ P DT
Sbjct: 390 KEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDT 449
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGL--SPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
+ +I Q L EA + F+EM+ RG+ +P T L++ + A +
Sbjct: 450 FVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSC 509
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
+ +K + + + IH L +EA M E+ L P +Y+ ++
Sbjct: 510 ISNK------TSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLM 563
Query: 336 FGFCRI 341
G ++
Sbjct: 564 KGLNKL 569
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 174/418 (41%), Gaps = 58/418 (13%)
Query: 167 LLQEMNQKGLAL-DDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSL 225
L++EM + L + + + L+ F + V+KA E+ EM G+ PD +G L+ +L
Sbjct: 153 LIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDAL 212
Query: 226 CLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDF 285
C ++ EA +F++M R P+ + +T L+ + + + +A + +M G PD
Sbjct: 213 CKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDI 271
Query: 286 VTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI-REL 344
V + ++ G + +A +++ M + G P+ Y+ +I CR + +
Sbjct: 272 --------VVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRM 323
Query: 345 GKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLL 404
+A ++ VEM++ +G DI T++ L+S + G ++K Y +
Sbjct: 324 DEAMRVFVEMER--------YGCEADI-----------VTYTALISGFCKWGMIDKGYSV 364
Query: 405 EREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENC 464
++ +P V Y + KK + E + C P +IY+ +I
Sbjct: 365 LDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC--HPDLLIYNVVIRLA 422
Query: 465 SNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAY 524
G +K+A R + M P + ++I G + +A
Sbjct: 423 CK---------------LGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEAC 467
Query: 525 DMYMEMVHYGF--APHMFSVLALIEALCCVRRYNKMS-----W-VIQNTLRSCNLNDS 574
+ + EMV G AP ++ +L+ L R +K+ W I N SC LN S
Sbjct: 468 NHFKEMVSRGIFSAPQYGTLKSLLNNLV---RDDKLEMAKDVWSCISNKTSSCELNVS 522
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 19/188 (10%)
Query: 363 GLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSV 422
+WGL +++ K+ + L + F LM + + ++KA + E+ + P + +
Sbjct: 149 AVWGLIEEMRKTNPE-LIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGC 207
Query: 423 FLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMR 482
L+ L K + EA +++ + E N + L+ G+
Sbjct: 208 LLDALCKNGSVKEASK-----------------VFEDMREKFPPN-LRYFTSLLYGWCRE 249
Query: 483 GLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSV 542
G + +A +M E +PD V+ L+ + G + AYD+ +M GF P++
Sbjct: 250 GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCY 309
Query: 543 LALIEALC 550
LI+ALC
Sbjct: 310 TVLIQALC 317
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 145/282 (51%), Gaps = 9/282 (3%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
Y +L+ G ++ +++ EM++ SP + T+N +V YC+ EA + LI
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
+ G +P+ ++ + + G C + +++ A ++ +EM Q G ++ +YT LI+ K++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
+A + +M P+ TY LI +LC SEA +LF++M G+ PD+ YT L+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
++ +A L + M+ G +P+ +TYNA+I G C +A+ +L
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNV--------ITYNALIKGFC-KKNVHKAMGLLS 353
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
M E L PD ++Y+T+I G C L AY+L M++ +
Sbjct: 354 KMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 130/285 (45%), Gaps = 13/285 (4%)
Query: 47 YNKLVLACCRDGRVEEA----LGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
YN L+ + R G VEE +L + D T+ +L++ +C G +A + +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
G P TY + + +CR K A + + + + G N +S+ L+ G K++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
EA LL +M + +TYT LI C G+ +A + +M GI PD Y LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
S C TL EA L + ML GL P+ TY L+ + + KA L +M+ + +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGF-CKKNVHKAMGLLSKMLEQNLV 361
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPD 327
PD +TYN +I G C + A +L M E GL P+
Sbjct: 362 PDL--------ITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 5/215 (2%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKV 97
D TY + CR V+ A + + M ++ +E +YT LI+ + + D+A +
Sbjct: 188 PDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSL 247
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
+M D P+V TY ++ A C + EA+ + + + E G +P+ + L+Q FC
Sbjct: 248 LVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCS 307
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
++EA LL+ M + GL + TY +LI FC K V KA + ++M+ + ++PD T
Sbjct: 308 GDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLIT 366
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKT 252
Y LI C L A+ L M GL P+ +T
Sbjct: 367 YNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 160/403 (39%), Gaps = 55/403 (13%)
Query: 140 GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKA 199
F+ N+ S+ +LV C + E ++ M + ++ D + + FC + +
Sbjct: 55 NFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALF---VVDFCRTMRKGDS 111
Query: 200 FEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
FE+K ++ K Y L+ SL + E L+ EML +SPD T+ L++
Sbjct: 112 FEIKYKLTPK-------CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNG 164
Query: 260 YRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM 319
Y +A +I G PD+ T Y + I G C + A ++ + M
Sbjct: 165 YCKLGYVVEAKQYVTWLIQAGCDPDYFT--------YTSFITGHCRRKEVDAAFKVFKEM 216
Query: 320 PEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGL 379
+ G + VSY+ +I+G +++ +A L V+M DD
Sbjct: 217 TQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMK-------------DD------NCC 257
Query: 380 SHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHH 439
+ T++ L+ G +A L ++++ P D Y+V + + EA
Sbjct: 258 PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGL 317
Query: 440 LLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGN 499
L + + MP I Y+ LI KGF + + KA +MLE N
Sbjct: 318 LEHMLENG--LMPNVITYNALI---------------KGFCKKNV-HKAMGLLSKMLEQN 359
Query: 500 YKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSV 542
PD YN LI C GN+ AY + M G P+ +V
Sbjct: 360 LVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRTV 402
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 167/403 (41%), Gaps = 102/403 (25%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
T+N ++ + GRV++ L I M E D TY+SLIH CD G DKA VF E+
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ S V TYN ++ +CR + +E+L + R ++E N++S+N L++G GK+
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKI 375
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+EA + + M KG A D TY IH C G V KA + E+ G D Y +
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPD----NKTYTGLMSAYRL--------------- 262
I LC ++ L EA +L +EM + G+ + N GL+ RL
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGC 495
Query: 263 ----------------QAQFSKAFHLQDEMIHKGFLPDFVT------------------- 287
+F +A EM+ G+ PD T
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 288 --------GISTSHVTYNAIIHGLCLLDRAEEALEILRGMP------------------- 320
G+ T + +N +IHGLC + + ++A+ ++ M
Sbjct: 556 LWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFF 615
Query: 321 ----------------EIGLSPDAVSYSTVIFGFCRIRELGKA 347
++GL PD +SY+T++ G C R + A
Sbjct: 616 KVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYA 658
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 239/538 (44%), Gaps = 55/538 (10%)
Query: 61 EEALGILRGM-----AESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNA 115
++AL + + M E +Y +L++ F + Q K +FA G +P++ TYN
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 116 IVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKG 175
++ C+ K F +A G L + + GF+P++ S++ ++ GK+++A EL EM+++G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 176 LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH-KGILPDADTYGPLIGSLCLQQTLSEA 234
+A D Y LI F + + A E+ ++ + P+ T+ +I L + +
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 235 FDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHV 294
+++ M + D TY+ L+ KA + +E+ + S V
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER--------KASIDVV 326
Query: 295 TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
TYN ++ G C + +E+LE+ R M E S + VSY+ +I G + E GK +
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKG---LLENGK-------I 375
Query: 355 DKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYL 414
D+ ++ W + DK+ T+ + G++ KA + +E+
Sbjct: 376 DEATMIWRLMPAKGYAADKT---------TYGIFIHGLCVNGYVNKALGVMQEVESSGG- 425
Query: 415 PVDVH-YSVFLNVLNKKARITEAKH-------HLLWFISHVCLRMPTFIIYDT------- 459
+DV+ Y+ ++ L KK R+ EA + H + SHVC + +I D+
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485
Query: 460 -LIENCSNNEFKSVVG---LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHC 515
L E N +VV L+ G G +A+ MLE +KPD Y++L+ C
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 516 RCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNT-LRSCNLN 572
R + A +++ + + G + LI LC V + + V+ N R+C N
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 119/519 (22%), Positives = 221/519 (42%), Gaps = 50/519 (9%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN L+ C+ E+A G L M + D +Y+++I+ G+ D A ++F EM
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM 210
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGIL-RCLIERGFEPNLISFNALVQGFCGKGK 160
+ G +P V YN ++ + ++K + A+ + R L + PN+ + N ++ G G+
Sbjct: 211 SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGR 270
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+++ ++ + M Q D TY+SLIH C+ G V+KA + E+ + D TY
Sbjct: 271 VDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNT 330
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
++G C + E+ +L++ M + S + +Y L+ + +A + M KG
Sbjct: 331 MLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
+ D TY IHGLC+ +AL +++ + G D +Y+++I C+
Sbjct: 390 YAAD--------KTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCK 441
Query: 341 IRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEK 400
+ L +A L EM K + L + +++ GL + + L +
Sbjct: 442 KKRLEEASNLVKEMSKHGVE------LNSHVCNALIGGL-------------IRDSRLGE 482
Query: 401 AYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTL 460
A RE+ P V Y++ + L K + EA F+ +
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA---------------SAFV--KEM 525
Query: 461 IENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNV 520
+EN + K+ L+ G + A + L+ + D ++N+LI C G +
Sbjct: 526 LENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKL 585
Query: 521 HKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMS 559
A + M H ++ + L+E V N+ +
Sbjct: 586 DDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT 624
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 136/298 (45%), Gaps = 12/298 (4%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKV 97
AD+TTY + C +G V +ALG+++ + S D Y S+I C + + ++A +
Sbjct: 392 ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL 451
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
EM G + NA++ RD R EA LR + + G P ++S+N L+ G C
Sbjct: 452 VKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCK 511
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
GK EA ++EM + G D KTY+ L+ C K++ A E+ + + G+ D
Sbjct: 512 AGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
+ LI LC L +A + M R + + TY LM + ++A + M
Sbjct: 572 HNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMY 631
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
G PD ++YN I+ GLC+ A+E G+ P +++ ++
Sbjct: 632 KMGLQPDI--------ISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 150/312 (48%), Gaps = 11/312 (3%)
Query: 39 KGLADETTYNKLVLACCRDGRVEEALGILRGMAESDEN---TYTSLIHLFCDQGQCDKAY 95
K D TYN ++ CR G+++E+L + R M + +Y LI + G+ D+A
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEAT 379
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
++ M G++ TY + C + +ALG+++ + G ++ ++ +++
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL 439
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
C K ++EEA L++EM++ G+ L+ +LI ++ +A EM G P
Sbjct: 440 CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTV 499
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
+Y LI LC EA +EML G PD KTY+ L+ + A L +
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
+ +G+ T + +N +IHGLC + + ++A+ ++ M + + V+Y+T++
Sbjct: 560 FLQ--------SGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 336 FGFCRIRELGKA 347
GF ++ + +A
Sbjct: 612 EGFFKVGDSNRA 623
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 4/216 (1%)
Query: 48 NKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEMID 103
N L+ RD R+ EA LR M ++ +Y LI C G+ +A EM++
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEE 163
G+ P + TY+ ++ CRD++ AL + ++ G E +++ N L+ G C GK+++
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 164 AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIG 223
A ++ M + + TY +L+ F G +A + M G+ PD +Y ++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 224 SLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
LC+ + +S A + F + G+ P T+ L+ A
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 15/204 (7%)
Query: 3 LLRVLFKTFLRNRVPPPDVMIRGFAAAWT---------ETEKTNWKGLADETTYNKLVLA 53
LR + K R V +++I G A E + WK D TY+ L+
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWK--PDLKTYSILLCG 543
Query: 54 CCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPS 109
CRD +++ AL + L+ E+D + LIH C G+ D A V A M + +
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 110 VATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
+ TYN ++ + + A I + + G +P++IS+N +++G C + A E
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663
Query: 170 EMNQKGLALDDKTYTSLIHLFCNK 193
+ G+ T+ L+ N+
Sbjct: 664 DARNHGIFPTVYTWNILVRAVVNR 687
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 155/321 (48%), Gaps = 15/321 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D +Y L+ R G+V +A+ I M S D +L+ C + D AY++
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMV 207
Query: 99 AEMIDTG-FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
AE I + S YNA++ +C+ R +A + + + G EP+L+++N L+ +
Sbjct: 208 AEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYD 267
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFE-MKAEMVHKGILPDAD 216
++ AE ++ EM + G+ LD +Y L+ C +K + M EM +G D
Sbjct: 268 NNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVV 326
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
+Y LI + C +A+ LF+EM ++G+ + TYT L+ A+ + S A L D+M
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM 386
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
G PD + Y I+ LC ++A + M E ++PDA+SY+++I
Sbjct: 387 TELGLSPD--------RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLIS 438
Query: 337 GFCRIRELGKAYKLKVEMDKK 357
G CR + +A KL +M K
Sbjct: 439 GLCRSGRVTEAIKLFEDMKGK 459
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 128/552 (23%), Positives = 232/552 (42%), Gaps = 53/552 (9%)
Query: 4 LRVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEA 63
+R+ +++ + N V MI + E ++++ + + YN+ + R+ R E A
Sbjct: 8 VRLAYRSRIANLVKSG--MIDNAVQVFDEMRHSSYRVFSFD--YNRFIGVLVRESRFELA 63
Query: 64 LGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLA 119
I M + TY+ I C + D + ++M GF P + +N +
Sbjct: 64 EAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDL 123
Query: 120 YCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD 179
CR+ + A+ C+++RG EP+++S+ L+ G GK+ +A E+ M + G++ D
Sbjct: 124 LCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEMVHKG-ILPDADTYGPLIGSLCLQQTLSEAFDLF 238
+K +L+ C+ KV+ A+EM AE + + Y LI C + +A L
Sbjct: 184 NKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALK 243
Query: 239 QEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNA 298
M + G PD TY L++ Y +A + EM+ +GI +YN
Sbjct: 244 SYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVR--------SGIQLDAYSYNQ 295
Query: 299 IIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS 358
++ C + ++ + E D VSYST+I FCR KAY+L EM +K
Sbjct: 296 LLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKG 355
Query: 359 ISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDV 418
+ VM + T+++L+ +L EG+ A L ++ P +
Sbjct: 356 M---------------VMNVV----TYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396
Query: 419 HYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKG 478
Y+ L+ L K + +A + +++ +IE+ + S L+ G
Sbjct: 397 FYTTILDHLCKSGNVDKA-----------------YGVFNDMIEHEITPDAISYNSLISG 439
Query: 479 FGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPH 538
G + +A + + M PD + +I R + AY ++ +M+ GF
Sbjct: 440 LCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Query: 539 MFSVLALIEALC 550
LI+A C
Sbjct: 500 RDVSDTLIKASC 511
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Query: 29 AWTETEKTNWKGLA-DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIH 83
A+ E+ KG+ + TY L+ A R+G A +L M E D YT+++
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
C G DKAY VF +MI+ +P +YN+++ CR R EA+ + + + P
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCN 192
+ ++F ++ G K+ A ++ +M KG LD +LI C+
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCS 512
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 8/241 (3%)
Query: 79 TSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
T+++ C G A +F EM + G P+V TYN ++ ++C R+ +A +LR +IE
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 139 RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK 198
+ P++++F+AL+ F + K+ EAEE+ +EM + + TY S+I FC + +V+
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 199 AFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
A M M KG PD T+ LI C + + ++F EM RRG+ + TYT L+
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193
Query: 259 AYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRG 318
+ A L +EMI G PD+ +T++ ++ GLC +A IL
Sbjct: 194 GFCQVGDLDAAQDLLNEMISCGVAPDY--------ITFHCMLAGLCSKKELRKAFAILED 245
Query: 319 M 319
+
Sbjct: 246 L 246
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 126/247 (51%), Gaps = 8/247 (3%)
Query: 110 VATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
V AIV C+D A + + E+G PN++++N ++ FC G+ +A++LL+
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 170 EMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQ 229
M +K + D T+++LI+ F + KV +A E+ EM+ I P TY +I C Q
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 230 TLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGI 289
+ +A + M +G SPD T++ L++ Y + + EM + GI
Sbjct: 130 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR--------GI 181
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
+ VTY +IHG C + + A ++L M G++PD +++ ++ G C +EL KA+
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFA 241
Query: 350 LKVEMDK 356
+ ++ K
Sbjct: 242 ILEDLQK 248
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 125/239 (52%), Gaps = 4/239 (1%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKV 97
AD +V C+DG A + M E + TY +I FC G+ A ++
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
MI+ +P + T++A++ A+ ++++ EA I + ++ P I++N+++ GFC
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+ ++++A+ +L M KG + D T+++LI+ +C +V+ E+ EM +GI+ + T
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 187
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
Y LI C L A DL EM+ G++PD T+ +++ + + KAF + +++
Sbjct: 188 YTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 8/189 (4%)
Query: 171 MNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQT 230
M Q + D T+++ C G A + EM KGI P+ TY +I S C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 231 LSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIS 290
S+A L + M+ + ++PD T++ L++A+ + + S+A + EM+ P
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFP------- 113
Query: 291 TSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
+ +TYN++I G C DR ++A +L M G SPD V++ST+I G+C+ + + ++
Sbjct: 114 -TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 172
Query: 351 KVEMDKKSI 359
EM ++ I
Sbjct: 173 FCEMHRRGI 181
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 15/182 (8%)
Query: 7 LFKTFLRNRVPPPDVMIRGFAAAWTETEKTN-----------WKGLADETTYNKLVLACC 55
L + + ++ P V A+ + K + W TYN ++ C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 56 RDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVA 111
+ RV++A +L MA D T+++LI+ +C + D ++F EM G +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 112 TYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM 171
TY ++ +C+ A +L +I G P+ I+F+ ++ G C K ++ +A +L+++
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Query: 172 NQ 173
+
Sbjct: 247 QK 248
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 111/282 (39%), Gaps = 40/282 (14%)
Query: 289 ISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
I V AI+ LC A + M E G+ P+ ++Y+ +I FC
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCH-------- 57
Query: 349 KLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED--TFSNLMSDYLAEGHLEKAYLLER 406
G W D + + +++ + D TFS L++ ++ E + +A + +
Sbjct: 58 -------------SGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYK 104
Query: 407 EINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSN 466
E+ + P + Y+ ++ K+ R+ +AK L S C P + + TLI
Sbjct: 105 EMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC--SPDVVTFSTLIN---- 158
Query: 467 NEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDM 526
G K + M+ H R + N Y LI C+ G++ A D+
Sbjct: 159 -------GYCKAKRVDNGMEIFCEMHRRGIVAN----TVTYTTLIHGFCQVGDLDAAQDL 207
Query: 527 YMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRS 568
EM+ G AP + ++ LC + K ++++ +S
Sbjct: 208 LNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 111/273 (40%), Gaps = 30/273 (10%)
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQ 265
M I D ++ LC A +LF EM +G+ P+ TY ++ ++ +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 266 FSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLS 325
+S A L MI K PD VT ++A+I+ + EA EI + M +
Sbjct: 61 WSDADQLLRHMIEKQINPDIVT--------FSALINAFVKERKVSEAEEIYKEMLRWSIF 112
Query: 326 PDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTF 385
P ++Y+++I GFC+ + A ++ M K G D+ TF
Sbjct: 113 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASK--------GCSPDV-----------VTF 153
Query: 386 SNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFIS 445
S L++ Y ++ + E++ + V Y+ ++ + + A+ L IS
Sbjct: 154 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS 213
Query: 446 HVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLVK 477
C P +I + ++ CS E + +++
Sbjct: 214 --CGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 149/303 (49%), Gaps = 19/303 (6%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAE---SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
+N L+ A C+ V +A + M + D TY+ L+ + + KA +VF EM
Sbjct: 204 VAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREM 263
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
ID G P + TY+ +V C+ R EALGI+R + +P ++ LV + + ++
Sbjct: 264 IDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRL 323
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
EEA + EM + G+ D + SLI FC +++ + + EM KG+ P++ + +
Sbjct: 324 EEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNII 383
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
+ L + EAFD+F++M+ + PD TYT ++ + + + A + M KG
Sbjct: 384 LRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGV 442
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
P S T++ +I+GLC ++A +L M E+G+ P V+ F R+
Sbjct: 443 FP--------SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT-------FGRL 487
Query: 342 REL 344
R+L
Sbjct: 488 RQL 490
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 156/356 (43%), Gaps = 29/356 (8%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
T+ ++ + + D+A F M P++ +N ++ A C+ K R+A + +
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+R F P+ +++ L++G+ + + +A E+ +EM G D TY+ ++ + C G+V
Sbjct: 230 RDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
++A + M P Y L+ + + L EA D F EM R G+ D + L
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
+ A+ + + + EM KG P+ + N I+ L +EA ++
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPN--------SKSCNIILRHLIERGEKDEAFDVF 400
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVM 376
R M ++ PDA +Y+ VI FC +E+ A K+ M KK G++ +
Sbjct: 401 RKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKK--------GVFPSM----- 446
Query: 377 QGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKAR 432
TFS L++ E +KA +L E+ P V + +L K+ R
Sbjct: 447 ------HTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 38/217 (17%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D TY+ +V C+ GRV+EALGI+R M S Y+ L+H + + + ++A F
Sbjct: 271 DIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTF 330
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALG-------------------ILRCLIER 139
EM +G VA +N+++ A+C+ R + ILR LIER
Sbjct: 331 LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIER 390
Query: 140 G---------------FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYT 184
G EP+ ++ +++ FC K +ME A+++ + M +KG+ T++
Sbjct: 391 GEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFS 450
Query: 185 SLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
LI+ C + +KA + EM+ GI P T+G L
Sbjct: 451 VLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 113/250 (45%), Gaps = 29/250 (11%)
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
+R +E ++ +++ +++ + + +L+ M +K + L+ +T+ ++ + KV+
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVD 185
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
+A M + P+ + L+ +LC + + +A ++F+ M R +PD+KTY+ L+
Sbjct: 186 EAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILL 244
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVT------------------GISTS------- 292
+ + KA + EMI G PD VT GI S
Sbjct: 245 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 304
Query: 293 --HVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
Y+ ++H +R EEA++ M G+ D ++++I FC+ + Y++
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 351 KVEMDKKSIS 360
EM K ++
Sbjct: 365 LKEMKSKGVT 374
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 32 ETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILR-----GMAESDENTYTSLIHLFC 86
E E++ K AD +N L+ A C+ R++ +L+ G+ + ++ L HL
Sbjct: 332 EMERSGMK--ADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLI- 388
Query: 87 DQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLI 146
++G+ D+A+ VF +MI P TY ++ +C K A + + + ++G P++
Sbjct: 389 ERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMH 447
Query: 147 SFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLF 190
+F+ L+ G C + ++A LL+EM + G+ T+ L L
Sbjct: 448 TFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLL 491
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 58 GRVEEALGILRGM---AESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYN 114
G +EA + R M E D +TYT +I +FC++ + + A KV+ M G PS+ T++
Sbjct: 391 GEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFS 450
Query: 115 AIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK 174
++ C ++ ++A +L +IE G P+ ++F L Q EE E++L+ +N+K
Sbjct: 451 VLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIK----EEREDVLKFLNEK 506
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 295 TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
T+ ++ + +EA+ M + L P+ V+++ ++ C+ + + KA ++ M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 355 DKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYL 414
+ T+S L+ + E +L KA + RE+
Sbjct: 230 RDRFTP--------------------DSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 269
Query: 415 PVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVG 474
P V YS+ +++L K R+ EA + +C PT IY L+
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC--KPTTFIYSVLVHT----------- 316
Query: 475 LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYG 534
+G +++A M K D AV+N LI C+ + Y + EM G
Sbjct: 317 ----YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKG 372
Query: 535 FAPH 538
P+
Sbjct: 373 VTPN 376
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 125/527 (23%), Positives = 233/527 (44%), Gaps = 67/527 (12%)
Query: 46 TYNKLVLACCRDGRVEEALGIL-RGMAES---DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
++ LV AC ++G + A ++ + AE + + + + + D+ +KV+ EM
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEM 209
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G+ +V T+N ++ ++C++ + EAL + +++ G PN++SFN ++ G C G M
Sbjct: 210 DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDM 269
Query: 162 EEAEELLQEMNQKG---LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
A +LL +M ++ + TY S+I+ FC G+++ A ++ +MV G+ + TY
Sbjct: 270 RFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTY 329
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
G L+ + + EA L EM +GL + Y ++ ++ A + +M
Sbjct: 330 GALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNS 389
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
K D T ++ GLC +EA+E R + E L D V ++T++ F
Sbjct: 390 KNMQID--------RFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHF 441
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED-TFSNLMSDYLAEGH 397
R ++L A ++ M ++QGLS + +F L+ YL EG
Sbjct: 442 VRDKKLACADQILGSM--------------------LVQGLSLDAISFGTLIDGYLKEGK 481
Query: 398 LEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIY 457
LE+A + + + V Y+ +N L+K+ A+ + + + + Y
Sbjct: 482 LERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVV------NAMEIKDIVTY 535
Query: 458 DTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDG------AVYNLLI 511
+TL+ N K+ G +++A D +L K DG +N++I
Sbjct: 536 NTLL----NESLKT-----------GNVEEA----DDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 512 FDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKM 558
C+ G+ KA ++ MV G P + LI + R K+
Sbjct: 577 NHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKV 623
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 144/298 (48%), Gaps = 19/298 (6%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAESDEN-------TYTSLIHLFCDQGQCDKAYKV 97
++N ++ C+ G + AL +L M N TY S+I+ FC G+ D A ++
Sbjct: 254 VSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERI 313
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
+M+ +G + TY A+V AY R EAL + + +G N + +N++V
Sbjct: 314 RGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFM 373
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+G +E A +L++MN K + +D T ++ C G V++A E + ++ K ++ D
Sbjct: 374 EGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVC 433
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
+ L+ + L+ A + ML +GLS D ++ L+ Y + + +A + D MI
Sbjct: 434 HNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMI 493
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
+++ V YN+I++GL A A ++ M EI D V+Y+T++
Sbjct: 494 K--------MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM-EI---KDIVTYNTLL 539
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 10/247 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D T +V CR+G V+EA+ R ++E D + +L+H F + A ++
Sbjct: 395 DRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQIL 454
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M+ G S ++ ++ Y ++ + AL I +I+ NL+ +N++V G +
Sbjct: 455 GSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKR 514
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD-- 216
G AE ++ M K D TY +L++ G VE+A ++ ++M +
Sbjct: 515 GMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLV 570
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
T+ +I LC + +A ++ + M+ RG+ PD+ TY L++++ K L D +
Sbjct: 571 TFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYL 630
Query: 277 IHKGFLP 283
I +G P
Sbjct: 631 ILQGVTP 637
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 170/365 (46%), Gaps = 34/365 (9%)
Query: 48 NKLVLACCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMID 103
N L+ + RVE+A+ + LR + +D T+ LI C G+ +KA ++ M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGF-EPNLISFNALVQGFCGKGKME 162
G P + TYN ++ +C+ +A + + + P+++++ +++ G+C GKM
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
EA LL +M + G+ + T+ L+ + G++ A E++ +M+ G PD T+ LI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
C +S+ F L++EM RG+ P+ TY+ L++A + + KA L ++ K +
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
P YN +I G C + EA I+ M + PD ++++ +I G C
Sbjct: 415 PQ--------PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Query: 343 ELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED-TFSNLMSDYLAEGHLEKA 401
+ +A + K V G S + T S+L+S L G ++A
Sbjct: 467 RMFEAVSI--------------------FHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Query: 402 YLLER 406
Y L +
Sbjct: 507 YHLNQ 511
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 192/474 (40%), Gaps = 82/474 (17%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TY L C G D A ++F M G SP+ +V ++ + A +L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
E E + N+L+ ++E+A +L E + D KT+ LI C GK
Sbjct: 165 FE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL-SPDNKTYTG 255
EKA E+ M G PD TY LI C L++A ++F+++ + SPD TYT
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
++S Y + +A L D+M+ G P ++VT+N ++ G A EI
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYP--------TNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSV 375
M G PD V+++++I G+CR+ ++ + ++L EM+
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN-------------------- 374
Query: 376 MQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITE 435
A G A+ YS+ +N L + R+ +
Sbjct: 375 ------------------ARGMFPNAFT----------------YSILINALCNENRLLK 400
Query: 436 AKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRM 495
A+ L S + P +Y+ +I+ GF G + +A + M
Sbjct: 401 ARELLGQLASKDIIPQP--FMYNPVID---------------GFCKAGKVNEANVIVEEM 443
Query: 496 LEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+ KPD + +LI HC G + +A ++ +MV G +P +V +L+ L
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 142/294 (48%), Gaps = 40/294 (13%)
Query: 34 EKTNWKGLADETTYNKLVLACCRDGRVEEAL---GILRGMA-ESDENTYTSLIHLFCDQG 89
E ++ D T+N L+ C G+ E+AL G++ G E D TY +LI FC
Sbjct: 196 EHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSN 255
Query: 90 QCDKAYKVFAEMIDTGF-SPSVATYNAIVLAYCRDKRFREA---------LGILRC---- 135
+ +KA ++F ++ SP V TY +++ YC+ + REA LGI
Sbjct: 256 ELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTF 315
Query: 136 ----------------------LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQ 173
+I G P++++F +L+ G+C G++ + L +EMN
Sbjct: 316 NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 174 KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSE 233
+G+ + TY+ LI+ CN+ ++ KA E+ ++ K I+P Y P+I C ++E
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE 435
Query: 234 AFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
A + +EM ++ PD T+T L+ + ++ + +A + +M+ G PD +T
Sbjct: 436 ANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 5/242 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY ++ C+ G++ EA +L M T+ L+ + G+ A ++
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+MI G P V T+ +++ YCR + + + + RG PN +++ L+ C +
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
++ +A ELL ++ K + Y +I FC GKV +A + EM K PD T+
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C++ + EA +F +M+ G SPD T + L+S +A+HL +++
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIAR 514
Query: 279 KG 280
KG
Sbjct: 515 KG 516
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 113/316 (35%), Gaps = 41/316 (12%)
Query: 274 DEMIHKGF----LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAV 329
D H GF F I S TYN + LC + A ++ M G+SP+
Sbjct: 80 DNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNR 139
Query: 330 SYSTVIFGFCRIRELGKAYKL---KVEMDKKSI---SWLGLWGLYDDIDKSV-------- 375
++ F +L A L E++ + S L D ++ ++
Sbjct: 140 LLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLR 199
Query: 376 MQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITE 435
Q + TF+ L+ G EKA L ++ F P V Y+ + K + +
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 436 AKHHLLWFIS-HVCLRMPTFIIYDTLIEN-CSNNEFKSVVG------------------- 474
A S VC P + Y ++I C + +
Sbjct: 260 ASEMFKDVKSGSVC--SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 475 LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYG 534
LV G+ G M A +M+ PD + LI +CR G V + + ++ EM G
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 535 FAPHMFSVLALIEALC 550
P+ F+ LI ALC
Sbjct: 378 MFPNAFTYSILINALC 393
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 170/365 (46%), Gaps = 34/365 (9%)
Query: 48 NKLVLACCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMID 103
N L+ + RVE+A+ + LR + +D T+ LI C G+ +KA ++ M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGF-EPNLISFNALVQGFCGKGKME 162
G P + TYN ++ +C+ +A + + + P+++++ +++ G+C GKM
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
EA LL +M + G+ + T+ L+ + G++ A E++ +M+ G PD T+ LI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
C +S+ F L++EM RG+ P+ TY+ L++A + + KA L ++ K +
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
P YN +I G C + EA I+ M + PD ++++ +I G C
Sbjct: 415 PQ--------PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Query: 343 ELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED-TFSNLMSDYLAEGHLEKA 401
+ +A + K V G S + T S+L+S L G ++A
Sbjct: 467 RMFEAVSI--------------------FHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Query: 402 YLLER 406
Y L +
Sbjct: 507 YHLNQ 511
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 192/474 (40%), Gaps = 82/474 (17%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TY L C G D A ++F M G SP+ +V ++ + A +L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
E E + N+L+ ++E+A +L E + D KT+ LI C GK
Sbjct: 165 FE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL-SPDNKTYTG 255
EKA E+ M G PD TY LI C L++A ++F+++ + SPD TYT
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
++S Y + +A L D+M+ G P ++VT+N ++ G A EI
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYP--------TNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSV 375
M G PD V+++++I G+CR+ ++ + ++L EM+
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN-------------------- 374
Query: 376 MQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITE 435
A G A+ YS+ +N L + R+ +
Sbjct: 375 ------------------ARGMFPNAFT----------------YSILINALCNENRLLK 400
Query: 436 AKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRM 495
A+ L S + P +Y+ +I+ GF G + +A + M
Sbjct: 401 ARELLGQLASKDIIPQP--FMYNPVID---------------GFCKAGKVNEANVIVEEM 443
Query: 496 LEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+ KPD + +LI HC G + +A ++ +MV G +P +V +L+ L
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 142/294 (48%), Gaps = 40/294 (13%)
Query: 34 EKTNWKGLADETTYNKLVLACCRDGRVEEAL---GILRGMA-ESDENTYTSLIHLFCDQG 89
E ++ D T+N L+ C G+ E+AL G++ G E D TY +LI FC
Sbjct: 196 EHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSN 255
Query: 90 QCDKAYKVFAEMIDTGF-SPSVATYNAIVLAYCRDKRFREA---------LGILRC---- 135
+ +KA ++F ++ SP V TY +++ YC+ + REA LGI
Sbjct: 256 ELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTF 315
Query: 136 ----------------------LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQ 173
+I G P++++F +L+ G+C G++ + L +EMN
Sbjct: 316 NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 174 KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSE 233
+G+ + TY+ LI+ CN+ ++ KA E+ ++ K I+P Y P+I C ++E
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE 435
Query: 234 AFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
A + +EM ++ PD T+T L+ + ++ + +A + +M+ G PD +T
Sbjct: 436 ANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 5/242 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY ++ C+ G++ EA +L M T+ L+ + G+ A ++
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+MI G P V T+ +++ YCR + + + + RG PN +++ L+ C +
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
++ +A ELL ++ K + Y +I FC GKV +A + EM K PD T+
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C++ + EA +F +M+ G SPD T + L+S +A+HL +++
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIAR 514
Query: 279 KG 280
KG
Sbjct: 515 KG 516
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 113/316 (35%), Gaps = 41/316 (12%)
Query: 274 DEMIHKGF----LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAV 329
D H GF F I S TYN + LC + A ++ M G+SP+
Sbjct: 80 DNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNR 139
Query: 330 SYSTVIFGFCRIRELGKAYKL---KVEMDKKSI---SWLGLWGLYDDIDKSV-------- 375
++ F +L A L E++ + S L D ++ ++
Sbjct: 140 LLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLR 199
Query: 376 MQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITE 435
Q + TF+ L+ G EKA L ++ F P V Y+ + K + +
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 436 AKHHLLWFIS-HVCLRMPTFIIYDTLIEN-CSNNEFKSVVG------------------- 474
A S VC P + Y ++I C + +
Sbjct: 260 ASEMFKDVKSGSVC--SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 475 LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYG 534
LV G+ G M A +M+ PD + LI +CR G V + + ++ EM G
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 535 FAPHMFSVLALIEALC 550
P+ F+ LI ALC
Sbjct: 378 MFPNAFTYSILINALC 393
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 157/331 (47%), Gaps = 14/331 (4%)
Query: 24 RGFAAAWTETEKTNWKGLA-DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTY 78
R W EK + KG+ + + LV + C +G EEAL I M + S+ Y
Sbjct: 323 RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVY 382
Query: 79 TSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
+L+ + ++ +F EM D G PS ATYN ++ AY R + +LR + +
Sbjct: 383 NTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMED 442
Query: 139 RGFEPNLISFNALVQGFCGKGKMEE-AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
G EPN+ S+ L+ + KM + A + M + GL +YT+LIH + G E
Sbjct: 443 LGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHE 502
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
KA+ EM +GI P +TY ++ + + ++++ MLR + TY L+
Sbjct: 503 KAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLL 562
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
+ Q + +A + E G P S +TYN +++ + + ++L+
Sbjct: 563 DGFAKQGLYIEARDVVSEFSKMGLQP--------SVMTYNMLMNAYARGGQDAKLPQLLK 614
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
M + L PD+++YST+I+ F R+R+ +A+
Sbjct: 615 EMAALNLKPDSITYSTMIYAFVRVRDFKRAF 645
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 158/369 (42%), Gaps = 26/369 (7%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRD--KRFREALG 131
D Y + I + D A++V+ M P T AI++ R + +E
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTC-AILITTLRKAGRSAKEVWE 330
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
I + E+G + + F LV+ FC +G EEA + EM +KG+ + Y +L+ +
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
+E+ + EM KG+ P A TY L+ + + L +EM GL P+ K
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
+YT L+SAY + S +M FL G+ S +Y A+IH + E+
Sbjct: 451 SYTCLISAYGRTKKMS-------DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEK 503
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK-----LKVEMDKKSISWLGL-- 364
A M + G+ P +Y++V+ F R + GK + L+ ++ I++ L
Sbjct: 504 AYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLD 563
Query: 365 ----WGLY----DDIDKSVMQGLSHED-TFSNLMSDYLAEGHLEKAYLLEREINYFDYLP 415
GLY D + + GL T++ LM+ Y G K L +E+ + P
Sbjct: 564 GFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKP 623
Query: 416 VDVHYSVFL 424
+ YS +
Sbjct: 624 DSITYSTMI 632
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%)
Query: 76 NTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRC 135
++YT+LIH + G +KAY F EM G PSV TY +++ A+ R + + I +
Sbjct: 486 HSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKL 545
Query: 136 LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
++ + I++N L+ GF +G EA +++ E ++ GL TY L++ + G+
Sbjct: 546 MLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQ 605
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
K ++ EM + PD+ TY +I + + AF + M++ G PD ++Y
Sbjct: 606 DAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEK 665
Query: 256 L 256
L
Sbjct: 666 L 666
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 180/452 (39%), Gaps = 44/452 (9%)
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK-AFEMKAEM 206
+NA + G + ++A E+ + M++ + D+ T LI G+ K +E+ +M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 207 VHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF 266
KG+ D +G L+ S C + EA + EM ++G+ + Y LM AY
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 267 SKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSP 326
+ L EM KG P S TYN ++ + + +LR M ++GL P
Sbjct: 396 EEVEGLFTEMRDKGLKP--------SAATYNILMDAYARRMQPDIVETLLREMEDLGLEP 447
Query: 327 DAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFS 386
+ SY+ +I + R +++ D + ++L + K ++ SH +++
Sbjct: 448 NVKSYTCLISAYGRTKKMS---------DMAADAFLRM-------KKVGLKPSSH--SYT 489
Query: 387 NLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISH 446
L+ Y G EKAY E+ P Y+ L+ + K +W +
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDT--GKLMEIWKLML 547
Query: 447 VCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAV 506
T I Y+TL++ GF +GL +A + +P
Sbjct: 548 REKIKGTRITYNTLLD---------------GFAKQGLYIEARDVVSEFSKMGLQPSVMT 592
Query: 507 YNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTL 566
YN+L+ + R G K + EM P + +I A VR + + + + +
Sbjct: 593 YNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMV 652
Query: 567 RSCNLNDSELLQVLNEIDVREGQTEYLRGELA 598
+S + D + L I + +T+ + + A
Sbjct: 653 KSGQVPDPRSYEKLRAILEDKAKTKNRKDKTA 684
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Query: 46 TYNKLVLACCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TY ++ A R G + + I LR + TY +L+ F QG +A V +E
Sbjct: 522 TYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEF 581
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G PSV TYN ++ AY R + + +L+ + +P+ I+++ ++ F
Sbjct: 582 SKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDF 641
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
+ A + M + G D ++Y L + +K K +
Sbjct: 642 KRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTK 677
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 169/361 (46%), Gaps = 27/361 (7%)
Query: 7 LFKTFLRNRVPPP----DVMIRGFAAAWTETEKTNWK--------GLADETTYNKLVLAC 54
+F+ R+ P + MI+G+ A +T+K K AD+ TY ++ AC
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKA-GQTQKAMEKLRDMETRGHEADKITYMTMIQAC 302
Query: 55 CRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSV 110
D + + + M E + ++ +I C +G+ ++ Y VF MI G P+V
Sbjct: 303 YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 111 ATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQE 170
A Y ++ Y + +A+ +L +I+ GF+P++++++ +V G C G++EEA +
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 422
Query: 171 MNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQT 230
GLA++ Y+SLI G+V++A + EM KG D+ Y LI + +
Sbjct: 423 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 231 LSEAFDLFQEM-LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGI 289
+ EA LF+ M G TYT L+S + + +A L D MI KG P
Sbjct: 483 VDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP------ 536
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
+ + A+ GLCL + A +IL + +G+ DA +I C+ + +A K
Sbjct: 537 --TAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACK 593
Query: 350 L 350
L
Sbjct: 594 L 594
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 149/319 (46%), Gaps = 17/319 (5%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLF---CDQGQCDKAY 95
D TYN ++ C+ G+ ++A+ LR M E+D+ TY ++I D G C Y
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
+ EM + G ++ ++ C++ + E + +I +G +PN+ + L+ G+
Sbjct: 316 Q---EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
G +E+A LL M +G D TY+ +++ C G+VE+A + G+ ++
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINS 432
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
Y LI L + EA LF+EM +G + D+ Y L+ A+ + +A L
Sbjct: 433 MFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR 492
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
M + G + TY ++ G+ R EEAL++ M + G++P A + +
Sbjct: 493 MEEE-------EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALS 545
Query: 336 FGFCRIRELGKAYKLKVEM 354
G C ++ +A K+ E+
Sbjct: 546 TGLCLSGKVARACKILDEL 564
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 139/315 (44%), Gaps = 43/315 (13%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
Y SL+ + D+ V +E+ F +V+ NA++ ++ + E L + R +
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
E G EP L ++N L+ G ++ AE + + M + D TY ++I +C G+ +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 198 KAFE-----------------------------------MKAEMVHKGILPDADTYGPLI 222
KA E + EM KGI + +I
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
G LC + L+E + +F+ M+R+G P+ YT L+ Y A L MI +GF
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
PD VTY+ +++GLC R EEAL+ GL+ +++ YS++I G +
Sbjct: 395 PDV--------VTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 446
Query: 343 ELGKAYKLKVEMDKK 357
+ +A +L EM +K
Sbjct: 447 RVDEAERLFEEMSEK 461
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 144/314 (45%), Gaps = 12/314 (3%)
Query: 48 NKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEMID 103
N L+ + + G VEE L + R M E+ TY L++ D A +VF M
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEE 163
P + TYN ++ YC+ + ++A+ LR + RG E + I++ ++Q
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 164 AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIG 223
L QEM++KG+ + ++ +I C +GK+ + + + M+ KG P+ Y LI
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 224 SLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
++ +A L M+ G PD TY+ +++ + +A F
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY--------FHT 422
Query: 284 DFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRE 343
G++ + + Y+++I GL R +EA + M E G + D+ Y+ +I F + R+
Sbjct: 423 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 344 LGKAYKLKVEMDKK 357
+ +A L M+++
Sbjct: 483 VDEAIALFKRMEEE 496
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILR-----GMAESDENTYTSLIHLFCDQGQCDKAYKV 97
D TY+ +V C++GRVEEAL G+A + Y+SLI G+ D+A ++
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLA-INSMFYSSLIDGLGKAGRVDEAERL 454
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL-RCLIERGFEPNLISFNALVQGFC 156
F EM + G + YNA++ A+ + ++ EA+ + R E G + + ++ L+ G
Sbjct: 455 FEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMF 514
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+ + EEA +L M KG+ + +L C GKV +A ++ E+ G++ DA
Sbjct: 515 KEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAA 574
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
+I +LC + EA L + RG + T +++A R + A L
Sbjct: 575 CED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSK 633
Query: 277 IHKGF 281
I G+
Sbjct: 634 IGIGY 638
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 151/376 (40%), Gaps = 45/376 (11%)
Query: 173 QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLS 232
QK + + Y SL+ + V++ + +E+ LI S +
Sbjct: 145 QKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVE 204
Query: 233 EAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL-PDFVTGIST 291
E ++++M G+ P TY LM+ + A F + E++ G + PD VT
Sbjct: 205 ELLWVWRKMKENGIEPTLYTYNFLMNGL-VSAMFVDSAERVFEVMESGRIKPDIVT---- 259
Query: 292 SHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLK 351
YN +I G C + ++A+E LR M G D ++Y T+I + G L
Sbjct: 260 ----YNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 352 VEMDKKSIS------WLGLWGL---------YDDIDKSVMQGL-SHEDTFSNLMSDYLAE 395
EMD+K I L + GL Y + + +G + ++ L+ Y
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 396 GHLEKAY-LLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTF 454
G +E A LL R I+ + P V YSV +N L K R+ EA + H C
Sbjct: 376 GSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYF-----HTCR----- 424
Query: 455 IIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDH 514
+D L N+ F S L+ G G G + +A R + M E D YN LI
Sbjct: 425 --FDGL---AINSMFYS--SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 515 CRCGNVHKAYDMYMEM 530
+ V +A ++ M
Sbjct: 478 TKHRKVDEAIALFKRM 493
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 142/283 (50%), Gaps = 9/283 (3%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
+ L+ F KA +V EM GF P + ++ A C+ ++A + +
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
R F NL F +L+ G+C GKM EA+ +L +MN+ G D YT+L+ + N GK+
Sbjct: 246 MR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
A+++ +M +G P+A+ Y LI +LC + EA +F EM R D TYT L+
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 364
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
S + + K + + D+MI KG +P S +TY I+ + EE LE++
Sbjct: 365 SGFCKWGKIDKCYIVLDDMIKKGLMP--------SELTYMHIMVAHEKKESFEECLELME 416
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
M +I PD Y+ VI C++ E+ +A +L EM++ +S
Sbjct: 417 KMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS 459
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 139/281 (49%), Gaps = 8/281 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA---ESDENTYTSLIHLFCDQGQCDKAYKVFA 99
DE + L+ A C+ G V++A + M + +TSL++ +C G+ +A V
Sbjct: 217 DEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLV 276
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
+M + GF P + Y ++ Y + +A +LR + RGFEPN + L+Q C
Sbjct: 277 QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+MEEA ++ EM + D TYT+L+ FC GK++K + + +M+ KG++P TY
Sbjct: 337 RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYM 396
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
++ + +++ E +L ++M + PD Y ++ + +A L +EM
Sbjct: 397 HIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL-RGM 319
G P G+ T + N + CLL+ ++ E++ RG+
Sbjct: 457 GLSP----GVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 144/332 (43%), Gaps = 35/332 (10%)
Query: 109 SVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS---FNALVQGFCGKGKMEEAE 165
S+ Y ++V + ++F G++ + R P LI F LVQ F +++A
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAI 203
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP-DADTYGPLIGS 224
E+L EM + G D+ + L+ C G V+ A ++ +M + P + + L+
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR--FPVNLRYFTSLLYG 261
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
C + EA + +M G PD YT L+S Y + + A+ L +M +GF P+
Sbjct: 262 WCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPN 321
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL 344
Y +I LC +DR EEA+++ M D V+Y+ ++ GFC+ ++
Sbjct: 322 --------ANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKI 373
Query: 345 GKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLL 404
K Y + +M KK + + E T+ ++M + + E+ L
Sbjct: 374 DKCYIVLDDMIKKGL-------------------MPSELTYMHIMVAHEKKESFEECLEL 414
Query: 405 EREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
++ +Y P Y+V + + K + EA
Sbjct: 415 MEKMRQIEYHPDIGIYNVVIRLACKLGEVKEA 446
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 99/256 (38%), Gaps = 77/256 (30%)
Query: 47 YNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
Y L+ A C+ R+EEA+ + M E+D TYT+L+ FC G+ DK Y V +MI
Sbjct: 325 YTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI 384
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREAL---------------GILRCLI---------- 137
G PS TY I++A+ + + F E L GI +I
Sbjct: 385 KKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVK 444
Query: 138 ----------ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGL----------- 176
E G P + +F ++ G +G + EA + +EM +GL
Sbjct: 445 EAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKL 504
Query: 177 ----ALDDK-----------------------TYTSLIHLFCNKGKVEKAFEMKAEMVHK 209
L DK ++T IH +KG ++A EM+
Sbjct: 505 LLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEM 564
Query: 210 GILPDADTYGPLIGSL 225
+P DT+ L+ L
Sbjct: 565 DFMPQPDTFAKLMKGL 580
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 44/250 (17%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
AD TY LV FC G+ DK Y V +M
Sbjct: 355 ADVVTYTALVSG-------------------------------FCKWGKIDKCYIVLDDM 383
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
I G PS TY I++A+ + + F E L ++ + + + P++ +N +++ C G++
Sbjct: 384 IKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEV 443
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP- 220
+EA L EM + GL+ T+ +I+ ++G + +A + EMV +G+ YG
Sbjct: 444 KEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF-SVSQYGTL 502
Query: 221 --LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD---- 274
L+ ++ + L A D++ + +G N L + A FSK + +
Sbjct: 503 KLLLNTVLKDKKLEMAKDVWSCITSKGACELN----VLSWTIWIHALFSKGYEKEACSYC 558
Query: 275 -EMIHKGFLP 283
EMI F+P
Sbjct: 559 IEMIEMDFMP 568
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 143/357 (40%), Gaps = 55/357 (15%)
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP---DNKTYTGLMSAYRLQAQFSKAFHL 272
+ Y ++ L + + L +EM R +P + + + L+ + KA +
Sbjct: 148 EVYKSMVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAIEV 205
Query: 273 QDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYS 332
DEM GF PD + ++ LC ++A ++ M + + ++
Sbjct: 206 LDEMPKFGFEPD--------EYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFT 256
Query: 333 TVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDY 392
++++G+CR+ ++ +A + V+M++ G DI ++NL+S Y
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQMNEA--------GFEPDIV-----------DYTNLLSGY 297
Query: 393 LAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMP 452
G + AY L R++ + P Y+V + L K R+ EA + + C
Sbjct: 298 ANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYEC--EA 355
Query: 453 TFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAAR------AHDR----------- 494
+ Y L+ C + ++ +GLM AH++
Sbjct: 356 DVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELM 415
Query: 495 --MLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
M + Y PD +YN++I C+ G V +A ++ EM G +P + + + +I L
Sbjct: 416 EKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 346 KAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLE 405
+ YK V++ K + +WGL +++ K Q L + F L+ + + ++KA +
Sbjct: 148 EVYKSMVKILSKMRQFGAVWGLIEEMRKENPQ-LIEPELFVVLVQRFASADMVKKAIEVL 206
Query: 406 REINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCS 465
E+ F + P + + L+ L K + +A + +R P + Y T
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAK----LFEDMRMRFPVNLRYFT------ 256
Query: 466 NNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYD 525
L+ G+ G M +A +M E ++PD Y L+ + G + AYD
Sbjct: 257 --------SLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYD 308
Query: 526 MYMEMVHYGFAPHMFSVLALIEALCCVRR 554
+ +M GF P+ LI+ALC V R
Sbjct: 309 LLRDMRRRGFEPNANCYTVLIQALCKVDR 337
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 8/283 (2%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
+S + SL F + A F +M D GF P+V + NA + + R AL
Sbjct: 165 DSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
R + PN + N ++ G+C GK+++ ELLQ+M + G D +Y +LI C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
KG + A ++K M G+ P+ T+ LI C L EA +F EM ++P+
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
TY L++ Y Q AF ++M+ GI +TYNA+I GLC + +
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMV--------CNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
A + ++ + + L P++ ++S +I G C + + ++L M
Sbjct: 397 AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 145/307 (47%), Gaps = 18/307 (5%)
Query: 58 GRVEEALGILRGM--AESDENTYT--SLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATY 113
GRV+ AL R M + N YT ++ +C G+ DK ++ +M GF + +Y
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 114 NAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQ 173
N ++ +C AL + + + G +PN+++FN L+ GFC K++EA ++ EM
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 174 KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSE 233
+A + TY +LI+ + +G E AF +MV GI D TY LI LC Q +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 234 AFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSH 293
A +E+ + L P++ T++ L+ ++ + F L MI G P+
Sbjct: 397 AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN--------E 448
Query: 294 VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGK---AYKL 350
T+N ++ C + + A ++LR M + D+ + V G ++ GK KL
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG---LKHQGKDQLVKKL 505
Query: 351 KVEMDKK 357
EM+ K
Sbjct: 506 LQEMEGK 512
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKV 97
A + +YN L+ C G + AL + M +S + T+ +LIH FC + +A KV
Sbjct: 271 ATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKV 330
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
F EM +P+ TYN ++ Y + A ++ G + +++++NAL+ G C
Sbjct: 331 FGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCK 390
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+ K +A + ++E++++ L + T+++LI C + ++ FE+ M+ G P+ T
Sbjct: 391 QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQT 450
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
+ L+ + C + A + +EM+RR + D++T + + + Q + L EM
Sbjct: 451 FNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Query: 278 HKGFLPD 284
K FL +
Sbjct: 511 GKKFLQE 517
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 199/500 (39%), Gaps = 102/500 (20%)
Query: 107 SPSVATYNAIVLAYCRDKRFREALGILR-CLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
S S+ T+ ++ ++++F+ A ILR L+ G + F+AL+ + E +
Sbjct: 112 SHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSY------RECD 165
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSL 225
+ + SL F + K A + +M G LP ++ + SL
Sbjct: 166 ST------------PRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSL 213
Query: 226 CLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDF 285
Q + A ++EM R +SP+ T +MS Y + K L +M GF
Sbjct: 214 LGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF---- 269
Query: 286 VTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELG 345
+ V+YN +I G C AL++ M + GL P+ V+++T+I GFCR +L
Sbjct: 270 ----RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
Query: 346 KAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLE 405
+A K+ EM +++ + T++ L++ Y +G E A+
Sbjct: 326 EASKVFGEMKAVNVA-------------------PNTVTYNTLINGYSQQGDHEMAFRFY 366
Query: 406 REINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCS 465
++ V N R + Y+ LI
Sbjct: 367 EDM-----------------VCNGIQR--------------------DILTYNALI---- 385
Query: 466 NNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYD 525
GL K + +KAA+ + + N P+ + ++ LI C N + ++
Sbjct: 386 -------FGLCK----QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 526 MYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTL-RSCNLNDSELLQVLNEID 584
+Y M+ G P+ + L+ A C ++ S V++ + RS L+ + QV N +
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLK 494
Query: 585 VREGQTEYLRGELAERAMDG 604
+G+ + ++ L E M+G
Sbjct: 495 -HQGKDQLVKKLLQE--MEG 511
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 19/230 (8%)
Query: 1 MKLLRVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKG-------LADETTYNKLVLA 53
+KL ++ K+ L+ V + +I GF A E + G + TYN L+
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 54 CCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPS 109
+ G E A M + D TY +LI C Q + KA + E+ P+
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 110 VATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
+T++A+++ C K + + +I G PN +FN LV FC + A ++L+
Sbjct: 413 SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Query: 170 EMNQKGLALDDKTYTSLIHLFCN----KGKVEKAFEMKAEMVHKGILPDA 215
EM ++ + LD +T +H CN +GK + ++ EM K L ++
Sbjct: 473 EMVRRSIPLDSRT----VHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 8/283 (2%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
+S + SL F + A F +M D GF P+V + NA + + R AL
Sbjct: 165 DSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
R + PN + N ++ G+C GK+++ ELLQ+M + G D +Y +LI C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
KG + A ++K M G+ P+ T+ LI C L EA +F EM ++P+
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
TY L++ Y Q AF ++M+ GI +TYNA+I GLC + +
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMV--------CNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
A + ++ + + L P++ ++S +I G C + + ++L M
Sbjct: 397 AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 145/307 (47%), Gaps = 18/307 (5%)
Query: 58 GRVEEALGILRGM--AESDENTYT--SLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATY 113
GRV+ AL R M + N YT ++ +C G+ DK ++ +M GF + +Y
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 114 NAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQ 173
N ++ +C AL + + + G +PN+++FN L+ GFC K++EA ++ EM
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 174 KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSE 233
+A + TY +LI+ + +G E AF +MV GI D TY LI LC Q +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 234 AFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSH 293
A +E+ + L P++ T++ L+ ++ + F L MI G P+
Sbjct: 397 AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN--------E 448
Query: 294 VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGK---AYKL 350
T+N ++ C + + A ++LR M + D+ + V G ++ GK KL
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG---LKHQGKDQLVKKL 505
Query: 351 KVEMDKK 357
EM+ K
Sbjct: 506 LQEMEGK 512
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKV 97
A + +YN L+ C G + AL + M +S + T+ +LIH FC + +A KV
Sbjct: 271 ATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKV 330
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
F EM +P+ TYN ++ Y + A ++ G + +++++NAL+ G C
Sbjct: 331 FGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCK 390
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+ K +A + ++E++++ L + T+++LI C + ++ FE+ M+ G P+ T
Sbjct: 391 QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQT 450
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
+ L+ + C + A + +EM+RR + D++T + + + Q + L EM
Sbjct: 451 FNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Query: 278 HKGFLPD 284
K FL +
Sbjct: 511 GKKFLQE 517
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 199/500 (39%), Gaps = 102/500 (20%)
Query: 107 SPSVATYNAIVLAYCRDKRFREALGILR-CLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
S S+ T+ ++ ++++F+ A ILR L+ G + F+AL+ + E +
Sbjct: 112 SHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSY------RECD 165
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSL 225
+ + SL F + K A + +M G LP ++ + SL
Sbjct: 166 ST------------PRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSL 213
Query: 226 CLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDF 285
Q + A ++EM R +SP+ T +MS Y + K L +M GF
Sbjct: 214 LGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF---- 269
Query: 286 VTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELG 345
+ V+YN +I G C AL++ M + GL P+ V+++T+I GFCR +L
Sbjct: 270 ----RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
Query: 346 KAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLE 405
+A K+ EM +++ + T++ L++ Y +G E A+
Sbjct: 326 EASKVFGEMKAVNVA-------------------PNTVTYNTLINGYSQQGDHEMAFRFY 366
Query: 406 REINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCS 465
++ V N R + Y+ LI
Sbjct: 367 EDM-----------------VCNGIQR--------------------DILTYNALI---- 385
Query: 466 NNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYD 525
GL K + +KAA+ + + N P+ + ++ LI C N + ++
Sbjct: 386 -------FGLCK----QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 526 MYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTL-RSCNLNDSELLQVLNEID 584
+Y M+ G P+ + L+ A C ++ S V++ + RS L+ + QV N +
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLK 494
Query: 585 VREGQTEYLRGELAERAMDG 604
+G+ + ++ L E M+G
Sbjct: 495 -HQGKDQLVKKLLQE--MEG 511
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 19/230 (8%)
Query: 1 MKLLRVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKG-------LADETTYNKLVLA 53
+KL ++ K+ L+ V + +I GF A E + G + TYN L+
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 54 CCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPS 109
+ G E A M + D TY +LI C Q + KA + E+ P+
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 110 VATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
+T++A+++ C K + + +I G PN +FN LV FC + A ++L+
Sbjct: 413 SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Query: 170 EMNQKGLALDDKTYTSLIHLFCN----KGKVEKAFEMKAEMVHKGILPDA 215
EM ++ + LD +T +H CN +GK + ++ EM K L ++
Sbjct: 473 EMVRRSIPLDSRT----VHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 15/318 (4%)
Query: 40 GLADET-TYNKLVLACCRDGRVEEALGILRGMAES-----DENTYTSLIHLFCDQGQCDK 93
GL T +N LV C++G + A ++ M S + TY++L+ + +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 94 AYKVFAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALV 152
A ++F +MI G SP T+N ++ +CR A IL + + G PN+ +++AL+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 153 QGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL 212
GFC GK++EA++ E+ + GL LD YT+L++ FC G+ ++A ++ EM
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 213 PDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHL 272
D TY ++ L + EA + + G+ + +Y +++A + KA
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 273 QDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYS 332
M +G P H T+N ++ LC E + +L G IGL P S+
Sbjct: 431 LSVMSERGIWPH--------HATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWG 482
Query: 333 TVIFGFCRIRELGKAYKL 350
V+ C+ R+L ++L
Sbjct: 483 AVVESICKERKLVHVFEL 500
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 117/239 (48%), Gaps = 4/239 (1%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVF 98
D T+N ++ CR G VE A IL M ++ N Y++L++ FC G+ +A + F
Sbjct: 267 DPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTF 326
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
E+ TG Y ++ +CR+ EA+ +L + + +++N +++G +
Sbjct: 327 DEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSE 386
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G+ EEA ++L + +G+ L+ +Y +++ C G++EKA + + M +GI P T+
Sbjct: 387 GRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATW 446
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
L+ LC + LR GL P K++ ++ + + + F L D ++
Sbjct: 447 NELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 201/460 (43%), Gaps = 60/460 (13%)
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG--FEPNLISFNALVQGFCGKG--- 159
GF+ + ATY+ ++ R K+F IL + F+ +L F L++ F
Sbjct: 84 GFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESL--FLNLMRHFSRSDLHD 141
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK-GILPDADTY 218
K+ E L+Q + + +L+ ++ ++L + G+V + ++ H G+ P+ +
Sbjct: 142 KVMEMFNLIQVIARVKPSLN--AISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIF 199
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLS-PDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
L+ C ++ AF + +EM R G+S P++ TY+ LM ++ +A L ++MI
Sbjct: 200 NILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMI 259
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
K GIS VT+N +I+G C E A +IL M + G +P+ +YS ++ G
Sbjct: 260 SK-------EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 338 FCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDT-FSNLMSDYLAEG 396
FC++ ++ +A + +D++ K+ GL + ++ LM+ + G
Sbjct: 313 FCKVGKIQEAKQ-----------------TFDEVKKT---GLKLDTVGYTTLMNCFCRNG 352
Query: 397 HLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHL-LWFISHVCLRMPTF- 454
++A L E+ + Y+V L L+ + R EA L W V L ++
Sbjct: 353 ETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYR 412
Query: 455 IIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDH 514
II + L C N E + V + RG+ P A +N L+
Sbjct: 413 IILNAL---CCNGELEKAVKFLSVMSERGIW----------------PHHATWNELVVRL 453
Query: 515 CRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRR 554
C G + + + G P S A++E++C R+
Sbjct: 454 CESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERK 493
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKV 97
AD TYN ++ +GR EEAL +L ++ +Y +++ C G+ +KA K
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
+ M + G P AT+N +V+ C + +L + G P S+ A+V+ C
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Query: 158 KGKMEEAEELLQEM 171
+ K+ ELL +
Sbjct: 491 ERKLVHVFELLDSL 504
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 151/312 (48%), Gaps = 13/312 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D TYN L+ C+ EAL + M S + TY S IH F +G+ +A ++F
Sbjct: 237 DIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF 296
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
E+ D + + TY ++ YCR EAL + + RGF P ++++N++++ C
Sbjct: 297 REIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCED 355
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G++ EA LL EM+ K + D+ T +LI+ +C + A ++K +M+ G+ D +Y
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSY 415
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C L A + M+ +G SP TY+ L+ + Q + + L +E
Sbjct: 416 KALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK 475
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
+G D Y +I +C L++ + A + M + GL D+V ++T+ + +
Sbjct: 476 RGLCADVAL--------YRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAY 527
Query: 339 CRIRELGKAYKL 350
R ++ +A L
Sbjct: 528 WRTGKVTEASAL 539
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 153/323 (47%), Gaps = 13/323 (4%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYK 96
+A+ YN LV AC + G E+A +L M E D TY +LI ++C + +A
Sbjct: 200 VANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALS 259
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
V M +G +P++ TYN+ + + R+ R REA + R I+ N +++ L+ G+C
Sbjct: 260 VQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR-EIKDDVTANHVTYTTLIDGYC 318
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
++EA L + M +G + TY S++ C G++ +A + EM K I PD
Sbjct: 319 RMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNI 378
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
T LI + C + + A + ++M+ GL D +Y L+ + + A M
Sbjct: 379 TCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSM 438
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
I KGF P + TY+ ++ G ++ +E ++L + GL D Y +I
Sbjct: 439 IEKGFSPGY--------ATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIR 490
Query: 337 GFCRIRELGKAYKLKVEMDKKSI 359
C++ ++ A L M+KK +
Sbjct: 491 RICKLEQVDYAKVLFESMEKKGL 513
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 142/289 (49%), Gaps = 12/289 (4%)
Query: 69 GMAESDENT---YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKR 125
G++E E+ ++ L+ + G + + VF ++ G P + ++ + + +
Sbjct: 124 GVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRL 183
Query: 126 FREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTS 185
I + +++ G N+ +N LV G E+AE+LL EM +KG+ D TY +
Sbjct: 184 TDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNT 243
Query: 186 LIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
LI ++C K +A ++ M G+ P+ TY I + + EA LF+E ++
Sbjct: 244 LISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDD 302
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCL 305
++ ++ TYT L+ Y +A L++ M +GF P G+ VTYN+I+ LC
Sbjct: 303 VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSP----GV----VTYNSILRKLCE 354
Query: 306 LDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
R EA +L M + PD ++ +T+I +C+I ++ A K+K +M
Sbjct: 355 DGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM 403
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 145/317 (45%), Gaps = 42/317 (13%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAE---SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN + R+GR+ EA + R + + ++ TYT+LI +C D+A ++ M
Sbjct: 274 VTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVM 333
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREA-------------------------------- 129
GFSP V TYN+I+ C D R REA
Sbjct: 334 ESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDM 393
Query: 130 ---LGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSL 186
+ + + +IE G + ++ S+ AL+ GFC ++E A+E L M +KG + TY+ L
Sbjct: 394 VSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWL 453
Query: 187 IHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL 246
+ F N+ K ++ ++ E +G+ D Y LI +C + + A LF+ M ++GL
Sbjct: 454 VDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGL 513
Query: 247 SPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD--FVTGISTSHVTYNAIIHGLC 304
D+ +T + AY + ++A L D M ++ + + IS S+ N ++
Sbjct: 514 VGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFFW 573
Query: 305 --LLDRAEEALEILRGM 319
+ DR + ILR M
Sbjct: 574 SHVGDRCLISKSILREM 590
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 9/248 (3%)
Query: 112 TYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM 171
++ +++ Y + +++ + + G +P+L + L+ + + ++ ++M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 172 NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTL 231
+ G+ + Y L+H G EKA ++ +EM KG+ PD TY LI C +
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 232 SEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIST 291
EA + M R G++P+ TY + + + + +A L E + D VT
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE------IKDDVTA--- 305
Query: 292 SHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLK 351
+HVTY +I G C ++ +EAL + M G SP V+Y++++ C + +A +L
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Query: 352 VEMDKKSI 359
EM K I
Sbjct: 366 TEMSGKKI 373
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 168/422 (39%), Gaps = 62/422 (14%)
Query: 116 IVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKG 175
++L + K F+ A +L L +R + + +LV G E+ E++
Sbjct: 86 MILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVS-----EDPEDV-------- 132
Query: 176 LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAF 235
++ L+ + G + + + ++ G+ P L+ SL Q+ +
Sbjct: 133 ----SHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVW 188
Query: 236 DLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVT 295
+F++M++ G+ + Y L+ A KA L EM KG PD T
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFT-------- 240
Query: 296 YNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMD 355
YN +I C EAL + M G++P+ V+Y++ I GF R + +A +L E+
Sbjct: 241 YNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK 300
Query: 356 KKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLP 415
DD+ ++ T++ L+ Y +++A L + + P
Sbjct: 301 -------------DDVT-------ANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSP 340
Query: 416 VDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGL 475
V Y+ L L + RI EA + LL +S + P I +TLI N + + +
Sbjct: 341 GVVTYNSILRKLCEDGRIREA-NRLLTEMSGKKIE-PDNITCNTLI-----NAYCKIEDM 393
Query: 476 VKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGF 535
V A + +M+E K D Y LI C+ + A + M+ GF
Sbjct: 394 VS----------AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Query: 536 AP 537
+P
Sbjct: 444 SP 445
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 127/260 (48%), Gaps = 8/260 (3%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
L+H CD+ + A + F + G PS TY+ +V + R + A + ++ER
Sbjct: 179 LLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN 238
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
+L+++NAL+ C G ++ ++ QEM GL D ++ IH +C+ G V A+
Sbjct: 239 CVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAY 298
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
++ M ++P+ T+ +I +LC + + +A+ L EM+++G +PD TY +M+ +
Sbjct: 299 KVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYH 358
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
+ ++A L M LPD TYN ++ L + R + A EI GM
Sbjct: 359 CDHCEVNRATKLLSRMDRTKCLPD--------RHTYNMVLKLLIRIGRFDRATEIWEGMS 410
Query: 321 EIGLSPDAVSYSTVIFGFCR 340
E P +Y+ +I G R
Sbjct: 411 ERKFYPTVATYTVMIHGLVR 430
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 107/243 (44%), Gaps = 5/243 (2%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TY+ LV R A + M E D Y +L+ C G D YK+F EM
Sbjct: 210 TYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEM 269
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ G P ++ + AYC A +L + PN+ +FN +++ C K+
Sbjct: 270 GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKV 329
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
++A LL EM QKG D TY S++ C+ +V +A ++ + M LPD TY +
Sbjct: 330 DDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMV 389
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA-YRLQAQFSKAFHLQDEMIHKG 280
+ L A ++++ M R P TYT ++ R + + +A + MI +G
Sbjct: 390 LKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEG 449
Query: 281 FLP 283
P
Sbjct: 450 IPP 452
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 140/332 (42%), Gaps = 28/332 (8%)
Query: 106 FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
F S + + AY R EA ++E G +P + + L+ C K + A+
Sbjct: 134 FEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSL 225
E + G+ KTY+ L+ + A ++ EM+ + + D Y L+ +L
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 226 CLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDF 285
C + + +FQEM GL PD ++ + AY A+ + D M +P+
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 286 VTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELG 345
T+N II LC ++ ++A +L M + G +PD +Y++++ C E+
Sbjct: 314 --------YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 346 KAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLE 405
+A KL MD+ + L T++ ++ + G ++A +
Sbjct: 366 RATKLLSRMDR-------------------TKCLPDRHTYNMVLKLLIRIGRFDRATEIW 406
Query: 406 REINYFDYLPVDVHYSVFLN-VLNKKARITEA 436
++ + P Y+V ++ ++ KK ++ EA
Sbjct: 407 EGMSERKFYPTVATYTVMIHGLVRKKGKLEEA 438
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 170/426 (39%), Gaps = 44/426 (10%)
Query: 104 TGFSPSVATYNAI--VLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+SP V++ N + VL C++ F L F +L S++ LV+ +
Sbjct: 60 VAYSPRVSS-NLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQF 118
Query: 162 EEAEELLQEMNQKG-LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+ L E + + K + + + +A MV GI P D
Sbjct: 119 ALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQ 178
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
L+ SLC ++ ++ A + F + G+ P KTY+ L+ + S A + DEM+ +
Sbjct: 179 LLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN 238
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
+ D + YNA++ LC + ++ + M +GL PDA S++ I +C
Sbjct: 239 CVVDL--------LAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCD 290
Query: 341 IRELGKAYKLKVEMDKKS-----------ISWLGLWGLYDD----IDKSVMQGLSHED-T 384
++ AYK+ M + I L DD +D+ + +G + + T
Sbjct: 291 AGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT 350
Query: 385 FSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFI 444
++++M+ + + +A L ++ LP Y++ L +L + R A +W
Sbjct: 351 YNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATE--IWEG 408
Query: 445 SHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDG 504
PT Y +I GLV+ +G +++A R + M++ P
Sbjct: 409 MSERKFYPTVATYTVMIH-----------GLVRK---KGKLEEACRYFEMMIDEGIPPYS 454
Query: 505 AVYNLL 510
+L
Sbjct: 455 TTVEML 460
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/578 (23%), Positives = 219/578 (37%), Gaps = 109/578 (18%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
A+E TY +V A CR G +EEA +L + Y + I+ C G+ +KA + E+
Sbjct: 214 ANEYTYAIVVKALCRKGNLEEAAMLL--IENESVFGYKTFINGLCVTGETEKAVALILEL 271
Query: 102 ID--------------------------------------TGFSPSVATYNAIVLAYCRD 123
ID GF V A++ YC++
Sbjct: 272 IDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKN 331
Query: 124 KRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTY 183
EALG L ++ +G + N + + ++Q +C EA E +E + LD Y
Sbjct: 332 MNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCY 391
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
G+VE+AFE+ EM +GI+PD Y LI CLQ + +A DL EM+
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIG 451
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGL 303
G+SPD TY L+S + + + M +G P+ VT + II GL
Sbjct: 452 NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTN--------SVIIEGL 503
Query: 304 CLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLG 363
C + +EA + + + P+ + ++ + G+C KAYK V ++
Sbjct: 504 CFARKVKEAEDFFSSLEQ--KCPE--NKASFVKGYCEAGLSKKAYKAFVRLEYP------ 553
Query: 364 LWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVF 423
+ KSV + L EG+LEKA+ + ++++ + P
Sbjct: 554 -------LRKSV---------YIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKM 597
Query: 424 LNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMR 482
+ K + EA+ + + P Y +I C NE + L + R
Sbjct: 598 IGAFCKLNNVREAQVLFDTMVERGLI--PDLFTYTIMIHTYCRLNELQKAESLFEDMKQR 655
Query: 483 GL--------------------------------MKKAARAHDRMLEGNYKPDGAVYNLL 510
G+ +KA+ D Y +L
Sbjct: 656 GIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVL 715
Query: 511 IFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
I C+ N+ +A +++ M+ G P M + LI +
Sbjct: 716 IDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISS 753
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 160/388 (41%), Gaps = 74/388 (19%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D YN A + GRVEEA +L+ M + D YT+LI +C QG+ A +
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446
Query: 99 AEMIDTGFSP-----------------------------------SVATYNAIVLAYCRD 123
EMI G SP + T + I+ C
Sbjct: 447 DEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFA 506
Query: 124 KRFREALGILRCLIERGFEPNLISF--------------NALVQ---------------G 154
++ +EA L E+ N SF A V+
Sbjct: 507 RKVKEAEDFFSSL-EQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFS 565
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
C +G +E+A ++L++M+ + +I FC V +A + MV +G++PD
Sbjct: 566 LCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD 625
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY-RLQAQFSKAFHLQ 273
TY +I + C L +A LF++M +RG+ PD TYT L+ Y +L + + +Q
Sbjct: 626 LFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQ 685
Query: 274 DEMIHKG---FLPDF-VTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAV 329
E+ + L +F GI V Y +I C ++ E+A E+ M + GL PD V
Sbjct: 686 GEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMV 745
Query: 330 SYSTVIFGFCRIRELGKAYKLKVEMDKK 357
+Y+T+I + R + A L E+ KK
Sbjct: 746 AYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 190/474 (40%), Gaps = 62/474 (13%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
L++ + G+ +F ++ G + TY +V A CR EA +L IE
Sbjct: 187 LMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL---IEN- 242
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEM-NQKGLALDD--KTYTSLIHLFCNKGKVE 197
++ + + G C G+ E+A L+ E+ ++K LA DD ++ FCN+ K++
Sbjct: 243 --ESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMK 300
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
A + EM G D +I C L EA +ML +GL + + ++
Sbjct: 301 AAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLIL 360
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
Y +A E D V YN L L R EEA E+L+
Sbjct: 361 QCYCKMDMCLEALEKFKEFRDMNIFLD--------RVCYNVAFDALSKLGRVEEAFELLQ 412
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQ 377
M + G+ PD ++Y+T+I G+C + K + L L ID+ +
Sbjct: 413 EMKDRGIVPDVINYTTLIDGYC--------------LQGKVVDALDL------IDEMIGN 452
Query: 378 GLSHE-DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
G+S + T++ L+S GH E+ + + P V SV + L ++ EA
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Query: 437 KHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRML 496
+ + +L + C N+ VKG+ GL KKA +A R+
Sbjct: 513 ED-----------------FFSSLEQKCPENK----ASFVKGYCEAGLSKKAYKAFVRL- 550
Query: 497 EGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
Y +VY L F C G + KA+D+ +M Y P +I A C
Sbjct: 551 --EYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFC 602
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 13/222 (5%)
Query: 75 ENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILR 134
++ Y L C +G +KA+ V +M P + ++ A+C+ REA +
Sbjct: 556 KSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFD 615
Query: 135 CLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI------- 187
++ERG P+L ++ ++ +C ++++AE L ++M Q+G+ D TYT L+
Sbjct: 616 TMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD 675
Query: 188 ---HLFCN-KGKV--EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEM 241
H C+ +G+V KA E+ E GI D Y LI C L +A +LF M
Sbjct: 676 PEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRM 735
Query: 242 LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
+ GL PD YT L+S+Y + A L E+ K +P
Sbjct: 736 IDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIP 777
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 23/236 (9%)
Query: 44 ETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFA 99
++ Y KL + C +G +E+A +L+ M+ E + +I FC +A +F
Sbjct: 556 KSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFD 615
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL-------- 151
M++ G P + TY ++ YCR ++A + + +RG +P+++++ L
Sbjct: 616 TMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD 675
Query: 152 --------VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
VQG GK K A E+L+E + G+ LD YT LI C +E+A E+
Sbjct: 676 PEHHETCSVQGEVGKRK---ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELF 732
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
M+ G+ PD Y LI S + + A L E+ ++ P + SA
Sbjct: 733 DRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSA 788
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 177/392 (45%), Gaps = 17/392 (4%)
Query: 46 TYNKLVLACCRDGRVEEALG-----ILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
TYN ++ AC + G + + + R + D T+ SL+ + G + A +F E
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M + V +YN ++ A C+ + A IL + + PN++S++ ++ GF G+
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+EA L EM G+ALD +Y +L+ ++ G+ E+A ++ EM GI D TY
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
L+G Q E +F EM R + P+ TY+ L+ Y + +A + E G
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
D V Y+A+I LC A+ ++ M + G+SP+ V+Y+++I F R
Sbjct: 545 LRADV--------VLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Query: 341 IRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFS-NLMSDYLAEGHLE 399
+ ++ S L L + V+Q T S N + EG E
Sbjct: 597 SATMDRSADYS-NGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQE 655
Query: 400 KAYLLE--REINYFDYLPVDVHYSVFLNVLNK 429
+ +LE R+++ + P V +S LN ++
Sbjct: 656 LSCILEVFRKMHQLEIKPNVVTFSAILNACSR 687
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 180/388 (46%), Gaps = 36/388 (9%)
Query: 79 TSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
+++I G+ A ++F G+ +V ++A++ AY R EA+ + + E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 139 RGFEPNLISFNALVQGFCGKGKME--EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
G PNL+++NA++ CGKG ME + + EM + G+ D T+ SL+ + G
Sbjct: 297 YGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
E A + EM ++ I D +Y L+ ++C + AF++ +M + + P+ +Y+ +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
+ + +F +A +L EM + GI+ V+YN ++ + R+EEAL+IL
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRY--------LGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVM 376
R M +G+ D V+Y+ ++ G+ + + + K+ EM ++ +
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV----------------- 510
Query: 377 QGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
L + T+S L+ Y G ++A + RE V YS ++ L K + A
Sbjct: 511 --LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 437 KHHLLWFISHVCLR--MPTFIIYDTLIE 462
+ I + P + Y+++I+
Sbjct: 569 ----VSLIDEMTKEGISPNVVTYNSIID 592
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 148/320 (46%), Gaps = 15/320 (4%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQG--QCDKAYKVFAE 100
++ L+ A R G EEA+ + M E + TY ++I C +G + + K F E
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDE 329
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M G P T+N+++ R + A + + R E ++ S+N L+ C G+
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
M+ A E+L +M K + + +Y+++I F G+ ++A + EM + GI D +Y
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
L+ EA D+ +EM G+ D TY L+ Y Q ++ + + EM +
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
LP+ +TY+ +I G +EA+EI R GL D V YS +I C+
Sbjct: 510 VLPNL--------LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 341 IRELGKAYKLKVEMDKKSIS 360
+G A L EM K+ IS
Sbjct: 562 NGLVGSAVSLIDEMTKEGIS 581
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 190/440 (43%), Gaps = 55/440 (12%)
Query: 2 KLLRVLFKTFLRNRVPPPDVMIRGFAAA------WTET-----EKTNWKGLADETTYNKL 50
K + F RN V P + A W E TN + D +YN L
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 51 VLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGF 106
+ A C+ G+++ A IL M + +Y+++I F G+ D+A +F EM G
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 107 SPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEE 166
+ +YN ++ Y + R EAL ILR + G + +++++NAL+ G+ +GK +E ++
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 167 LLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLC 226
+ EM ++ + + TY++LI + G ++A E+ E G+ D Y LI +LC
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC 560
Query: 227 LQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFV 286
+ A L EM + G+SP+ TY ++ A+ A ++ + + G LP
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS----ADYSNGGSLPFSS 616
Query: 287 TGIST-SHVTYNAIIHGLCLLDR---------AEEA-------LEILRGMPEIGLSPDAV 329
+ +S + N +I L EE LE+ R M ++ + P+ V
Sbjct: 617 SALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVV 676
Query: 330 SYSTVIFGFCRIRELGKAYKLKVE----------------MDKKSISWLGLWGLYDDIDK 373
++S ++ R A L E M ++ WL L+D +++
Sbjct: 677 TFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNE 736
Query: 374 SVMQGLSHEDTFSNLMSDYL 393
M G S F N ++D L
Sbjct: 737 --MDG-STASAFYNALTDML 753
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 123/515 (23%), Positives = 211/515 (40%), Gaps = 57/515 (11%)
Query: 73 SDENTYTSLIHLFCDQGQCDKA--YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREAL 130
SD+ TY +I ++ +CDKA + FA + + +A++ R + A
Sbjct: 196 SDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAK 253
Query: 131 GILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLF 190
I G+ + +F+AL+ + G EEA + M + GL + TY ++I
Sbjct: 254 RIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA- 312
Query: 191 CNKGKVE--KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAF-DLFQEMLRRGLS 247
C KG +E + + EM G+ PD T+ L+ ++C + L EA +LF EM R +
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 248 PDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLD 307
D +Y L+ A Q AF + +M K +P+ V +Y+ +I G
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVV--------SYSTVIDGFAKAG 423
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGL 367
R +EAL + M +G++ D VSY+T++ + ++ +A + EM I
Sbjct: 424 RFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK------- 476
Query: 368 YDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVL 427
K V+ T++ L+ Y +G ++ + E+ LP + YS ++
Sbjct: 477 -----KDVV-------TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 428 NKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMK 486
+K EA F S LR ++Y LI+ C N S V L+
Sbjct: 525 SKGGLYKEAMEIFREFKS-AGLRA-DVVLYSALIDALCKNGLVGSAVSLI---------- 572
Query: 487 KAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALI 546
D M + P+ YN +I R + ++ D Y F+ S L
Sbjct: 573 ------DEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD-YSNGGSLPFSSSALSALTET 625
Query: 547 EALCCVRRYNKMSWVIQN-TLRSCNLNDSELLQVL 580
E ++ + +++ N T + C EL +L
Sbjct: 626 EGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCIL 660
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 148/306 (48%), Gaps = 18/306 (5%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGIL-----RGMAESDENTYTSLIHLFCDQGQCDKAYK 96
++ TYN LV C G + ++L + +G+A + TY+ L+ + D+A K
Sbjct: 174 SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA-PNAFTYSFLLEAAYKERGTDEAVK 232
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+ E+I G P++ +YN ++ +C++ R +A+ + R L +GF+ N++S+N L++ C
Sbjct: 233 LLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLC 292
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKG---ILP 213
G+ EEA LL EM+ A TY LI+ G+ E+A ++ EM KG
Sbjct: 293 CDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRV 351
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
A +Y P+I LC + + EM+ R P+ TY + S ++ +AF++
Sbjct: 352 TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYII 411
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
+ +K +H Y ++I LC A ++L M G PDA +YS
Sbjct: 412 QSLSNKQ--------KCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSA 463
Query: 334 VIFGFC 339
+I G C
Sbjct: 464 LIRGLC 469
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 165/346 (47%), Gaps = 23/346 (6%)
Query: 40 GLADETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAY 95
G + +YN L+ C++GR ++A+ + R + +++ +Y L+ C G+ ++A
Sbjct: 242 GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEAN 301
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE--RGFEPNLISFNALVQ 153
+ AEM +PSV TYN ++ + R +AL +L+ + + F S+N ++
Sbjct: 302 SLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIA 361
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
C +GK++ + L EM + ++ TY ++ L + KV++AF + + +K
Sbjct: 362 RLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCC 421
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
D Y +I SLC + AF L EM R G PD TY+ L+ L+ F+ A +
Sbjct: 422 THDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVL 481
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
M V +NA+I GLC + R + A+E+ M E P+ +Y+
Sbjct: 482 SIMEESENCKPTVD-------NFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAI 534
Query: 334 VIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLY--DDIDKSVMQ 377
++ G A++ ++E+ K+ + L L + + +D+ VMQ
Sbjct: 535 LVEGI--------AHEDELELAKEVLDELRLRKVIGQNAVDRIVMQ 572
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/482 (20%), Positives = 200/482 (41%), Gaps = 44/482 (9%)
Query: 87 DQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLI 146
D+ ++ ++ G P+VA ++ C+ R ++A+ ++ ++ G P+
Sbjct: 83 DEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDAS 142
Query: 147 SFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEM 206
++ LV C +G + A +L+++M G + TY +L+ C G + ++ + +
Sbjct: 143 AYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 207 VHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF 266
+ KG+ P+A TY L+ + ++ EA L E++ +G P+ +Y L++ + + +
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 267 SKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSP 326
A L E+ KGF + V+YN ++ LC R EEA +L M +P
Sbjct: 263 DDAMALFRELPAKGFKANV--------VSYNILLRCLCCDGRWEEANSLLAEMDGGDRAP 314
Query: 327 DAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFS 386
V+Y+ +I +A ++ EM K + + Y+ +
Sbjct: 315 SVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV--------------- 359
Query: 387 NLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKH-------- 438
++ EG ++ E+ Y P + Y+ ++ +++ EA +
Sbjct: 360 --IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNK 417
Query: 439 -----HLLW--FISHVCLRMPTFIIYDTLIE--NCS-NNEFKSVVGLVKGFGMRGLMKKA 488
H + I+ +C + TF + L E C + + + L++G + G+ A
Sbjct: 418 QKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGA 477
Query: 489 ARAHDRMLEG-NYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIE 547
M E N KP +N +I C+ A +++ MV P+ + L+E
Sbjct: 478 MEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVE 537
Query: 548 AL 549
+
Sbjct: 538 GI 539
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 5/224 (2%)
Query: 32 ETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCD 87
E K N + T+YN ++ C++G+V+ + L M + +E TY ++ L
Sbjct: 341 EMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEH 400
Query: 88 QGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS 147
+ +A+ + + + + Y +++ + CR A +L + GF+P+ +
Sbjct: 401 NSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHT 460
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQ-KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEM 206
++AL++G C +G A E+L M + + + ++I C + + A E+ M
Sbjct: 461 YSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMM 520
Query: 207 VHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDN 250
V K +P+ TY L+ + + L A ++ E+ R + N
Sbjct: 521 VEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQN 564
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/551 (21%), Positives = 226/551 (41%), Gaps = 65/551 (11%)
Query: 21 VMIRGFAAA--------WTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAE 72
V++ GF+ A W + K K L + + Y K++ A C+ +E A ++R M E
Sbjct: 384 VIVGGFSKAGHAEAADYWFDEAKRIHKTL-NASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 73 SDENTYTSLIHLFCDQ----GQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFRE 128
+ ++ H D K VF + + GF+P+V TY ++ Y + + +
Sbjct: 443 EGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 502
Query: 129 ALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
AL + R + E G + NL +++ ++ GF A + ++M ++G+ D Y ++I
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 562
Query: 189 LFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
FC G +++A + EM P T+ P+I + + ++F M R G P
Sbjct: 563 AFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP 622
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDR 308
T+ GL++ + Q KA + DEM + G+S + TY I+ G +
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMT--------LAGVSANEHTYTKIMQGYASVGD 674
Query: 309 AEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLY 368
+A E + GL D +Y ++ C+ + A + EM ++I
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIP-------- 726
Query: 369 DDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVH-YSVFLNVL 427
+ ++ L+ + G + +A L +++ P D+H Y+ F++
Sbjct: 727 -----------RNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP-DIHTYTSFISAC 774
Query: 428 NKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKK 487
+K + A + M + + K+ L+KG+ L +K
Sbjct: 775 SKAGDMNRA--------TQTIEEMEALGVKPNI---------KTYTTLIKGWARASLPEK 817
Query: 488 AARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAY------DMYMEMVHYGFAPHMFS 541
A ++ M KPD AVY+ L+ ++ +AY + EMV G M +
Sbjct: 818 ALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGT 877
Query: 542 VLALIEALCCV 552
+ + LC +
Sbjct: 878 AVHWSKCLCKI 888
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/512 (22%), Positives = 205/512 (40%), Gaps = 60/512 (11%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEMI 102
Y L+ A ++EAL +R M E TY+ ++ F G + A F E
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+ + + Y I+ A+C+ A ++R + E G + + ++ ++ G+ +
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
+ + + + + G TY LI+L+ GK+ KA E+ M +G+ + TY +I
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
+ + AF +F++M++ G+ PD Y ++SA+ +A EM
Sbjct: 527 NGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
P + T+ IIHG +LE+ M G P +++ +I G R
Sbjct: 587 P--------TTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKR 638
Query: 343 ELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAY 402
++ KA ++ EM +S ++E T++ +M Y + G KA+
Sbjct: 639 QMEKAVEILDEMTLAGVS-------------------ANEHTYTKIMQGYASVGDTGKAF 679
Query: 403 LLEREINYF-----DYLPVDV-HYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFII 456
YF + L VD+ Y L K R+ A L + R
Sbjct: 680 ------EYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA----LAVTKEMSAR------ 723
Query: 457 YDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCR 516
N N F + L+ G+ RG + +AA +M + KPD Y I +
Sbjct: 724 ------NIPRNSFVYNI-LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 517 CGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
G++++A EM G P++ + LI+
Sbjct: 777 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 189/448 (42%), Gaps = 54/448 (12%)
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEEL 167
PS + +V Y R A + RG P + +L+ + M+EA
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 168 LQEMNQKGLALDDKTYTSLIHLFCNKGKVEKA---FEMKAEMVHKGILPDADTYGPLIGS 224
+++M ++G+ + TY+ ++ F G E A F+ +A+ +HK + +A YG +I +
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFD-EAKRIHKTL--NASIYGKIIYA 423
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
C + A L +EM G+ Y +M Y + A K + + GF P
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL 344
VTY +I+ + + +ALE+ R M E G+ + +YS +I GF ++++
Sbjct: 484 V--------VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD- 534
Query: 345 GKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDT-FSNLMSDYLAEGHLEKAYL 403
W + +++D+ V +G+ + ++N++S + G++++A
Sbjct: 535 ----------------WANAFAVFEDM---VKEGMKPDVILYNNIISAFCGMGNMDRAIQ 575
Query: 404 LEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWF-ISHVCLRMPTFIIYDTLIE 462
+E+ + P F+ +++ A+ + + L F + C +PT ++
Sbjct: 576 TVKEMQKLRHRPTT---RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN---- 628
Query: 463 NCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHK 522
GL+ G + M+KA D M + Y ++ + G+ K
Sbjct: 629 -----------GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGK 677
Query: 523 AYDMYMEMVHYGFAPHMFSVLALIEALC 550
A++ + + + G +F+ AL++A C
Sbjct: 678 AFEYFTRLQNEGLDVDIFTYEALLKACC 705
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 165/404 (40%), Gaps = 74/404 (18%)
Query: 1 MKLLRVLFKTFLRNRVPPPDVMIRGF------AAAWTETEKTNWKGL-ADETTYNKLVLA 53
+++ RV+ + +++ + +MI GF A A+ E +G+ D YN ++ A
Sbjct: 504 LEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISA 563
Query: 54 CCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPS 109
C G ++ A+ ++ M + T+ +IH + G ++ +VF M G P+
Sbjct: 564 FCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPT 623
Query: 110 VATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
V T+N ++ ++ +A+ IL + G N ++ ++QG+ G +A E
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFT 683
Query: 170 EMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQ 229
+ +GL +D TY +L+ C G+++ A + EM + I ++ Y LI +
Sbjct: 684 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 743
Query: 230 TLSEAFDLFQEMLRRGLSPD-----------------------------------NKTYT 254
+ EA DL Q+M + G+ PD KTYT
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 803
Query: 255 GLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGL--CLLDRAEEA 312
L+ + + KA +EM G PD A+ H L LL RA A
Sbjct: 804 TLIKGWARASLPEKALSCYEEMKAMGIKPD------------KAVYHCLLTSLLSRASIA 851
Query: 313 --------LEILRGMPEIGLSPD---AVSYSTVIFGFCRIRELG 345
+ I + M E GL D AV +S + C+I G
Sbjct: 852 EAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCL---CKIEASG 892
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 198/459 (43%), Gaps = 40/459 (8%)
Query: 43 DETTYNKLVLACCRDGRVEEALGI---LRGMAESDENT-------YTSLIHLFCDQGQCD 92
D T L+ C+ RV+EAL + +RG D N + +LI C G+
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 93 KAYKVFAEM-IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
+A ++ M ++ +P+ TYN ++ YCR + A ++ + E +PN+++ N +
Sbjct: 388 EAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTI 447
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
V G C + A +M ++G+ + TY +LIH C+ VEKA +M+ G
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGC 507
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
PDA Y LI LC + +A + +++ G S D Y L+ + + K +
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYE 567
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
+ +M +G PD +TYN +I E ++ M E GL P +Y
Sbjct: 568 MLTDMEKEGKKPD--------SITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 332 STVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSD 391
VI +C + EL +A KL +M GL+ ++ + + ++ L++
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDM-----------GLHSKVNPNTV-------IYNILINA 661
Query: 392 YLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRM 451
+ G+ +A L+ E+ P Y+ LN+K + + + C
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC--E 719
Query: 452 PTFIIYDTLIENCS-NNEFKSVVGLVKGFGMRGLMKKAA 489
P I + L+E S ++E + ++G+ + +KA+
Sbjct: 720 PNQITMEILMERLSGSDELVKLRKFMQGYSVASPTEKAS 758
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 147/324 (45%), Gaps = 14/324 (4%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMA-----ESDENTYTSLIHLFCDQGQCDKAYK 96
AD +N L+ C+ GR++EA +L M + TY LI +C G+ + A +
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
V + M + P+V T N IV CR A+ + + G + N++++ L+ C
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+E+A ++M + G + D K Y +LI C + A + ++ G D
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
Y LIG C + + +++ +M + G PD+ TY L+S + F + ++M
Sbjct: 548 AYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP-EIGLSPDAVSYSTVI 335
G P + TY A+I C + +EAL++ + M ++P+ V Y+ +I
Sbjct: 608 REDGLDP--------TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILI 659
Query: 336 FGFCRIRELGKAYKLKVEMDKKSI 359
F ++ G+A LK EM K +
Sbjct: 660 NAFSKLGNFGQALSLKEEMKMKMV 683
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 199/515 (38%), Gaps = 95/515 (18%)
Query: 49 KLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDT 104
+ + + C++ R A IL + ++ + + +L+ + + +M +
Sbjct: 264 RFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEV 323
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG--------FEPNLISFNALVQGFC 156
P V T ++ C+ +R EAL + + RG + + I FN L+ G C
Sbjct: 324 KIRPDVVTLGILINTLCKSRRVDEALEVFEKM--RGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 157 GKGKMEEAEELLQEMN-QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
G+++EAEELL M ++ A + TY LI +C GK+E A E+ + M I P+
Sbjct: 382 KVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
T ++G +C L+ A F +M + G+
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV----------------------------- 472
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
KG + VTY +IH C + E+A+ M E G SPDA Y +I
Sbjct: 473 ---KGNV-----------VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 336 FGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAE 395
G C++R A ++ VE K+ L L ++ L+ + +
Sbjct: 519 SGLCQVRRDHDAIRV-VEKLKEGGFSLDLLA------------------YNMLIGLFCDK 559
Query: 396 GHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFI 455
+ EK Y + ++ P + Y+ ++ K E+ ++ + L PT
Sbjct: 560 NNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF-ESVERMMEQMREDGLD-PTVT 617
Query: 456 IYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDH 514
Y +I+ CS E + L K G L P+ +YN+LI
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMG---------------LHSKVNPNTVIYNILINAF 662
Query: 515 CRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+ GN +A + EM P++ + AL + L
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/501 (18%), Positives = 194/501 (38%), Gaps = 86/501 (17%)
Query: 56 RDGRVEEALGILRGMAESDENTYTS--LIHLFCDQGQCDKAYKVFAEMI--DTGFSPSVA 111
R G V +++ + + + +N+ ++ + G D A+KV EM+ ++ F P+
Sbjct: 164 RMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRI 223
Query: 112 TYNAIVLAYCRDKRFREA--LGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
T + ++ + + E + ++ G PN + + C + A ++L
Sbjct: 224 TADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILS 283
Query: 170 EMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQ 229
++ + L+ + +L+ + + ++ +M I PD T G LI +LC +
Sbjct: 284 DLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSR 343
Query: 230 TLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGI 289
+ EA ++F++M RG D+ I
Sbjct: 344 RVDEALEVFEKM--RGKRTDDGNV-----------------------------------I 366
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMP-EIGLSPDAVSYSTVIFGFCRIRELGKAY 348
+ +N +I GLC + R +EA E+L M E +P+AV+Y+ +I G+CR +L A
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA- 425
Query: 349 KLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREI 408
K V+ + ++ N+++ G + + + L +
Sbjct: 426 ------------------------KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 409 NYF---DYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCS 465
+F + V + ++ +++ ++ + + W Y+ ++E
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW--------------YEKMLEAGC 507
Query: 466 NNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYD 525
+ + K L+ G A R +++ EG + D YN+LI C N K Y+
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYE 567
Query: 526 MYMEMVHYGFAPHMFSVLALI 546
M +M G P + LI
Sbjct: 568 MLTDMEKEGKKPDSITYNTLI 588
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 140/338 (41%), Gaps = 48/338 (14%)
Query: 231 LSEAFDLFQEMLRR-GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT-G 288
+ +AF + EML++ + P N+ ++A + + K L +E I + F + G
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNR-----ITADIVLHEVWKGRLLTEEKII-ALISRFSSHG 254
Query: 289 ISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
+S + V I LC RA A +IL + + +A ++ ++ R ++ +
Sbjct: 255 VSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 349 KLKVEMDKKSI--SWLGLWGLYDDIDKS--VMQGLSHEDTFSNLMSDYLAEGHLEKAYLL 404
L ++MD+ I + L L + + KS V + L + F + +G++ KA
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL---EVFEKMRGKRTDDGNVIKAD-- 369
Query: 405 EREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWF-ISHVCLRMPTFIIYDTLIEN 463
+H++ ++ L K R+ EA+ L+ + C P + Y N
Sbjct: 370 ------------SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERC--APNAVTY-----N 410
Query: 464 CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKA 523
C L+ G+ G ++ A RM E KP+ N ++ CR ++ A
Sbjct: 411 C----------LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Query: 524 YDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNK-MSW 560
+M+M G ++ + + LI A C V K M W
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 221/526 (42%), Gaps = 58/526 (11%)
Query: 34 EKTNWKGLADETTYNKLVLACCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQG 89
E W D TY+ L+ A R G+ A+ + LR +TY +LI+ G
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227
Query: 90 QCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFN 149
+A +V +M D G P + T+N ++ AY +++ +AL + P+ +FN
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 287
Query: 150 ALVQGFCGKGKMEEAEELLQEMNQKGLAL--DDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
++ G+ +A +L M +K D T+TS++HL+ KG++E + MV
Sbjct: 288 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFS 267
+G+ P+ +Y L+G+ + A + ++ + G+ PD +YT L+++Y Q
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 268 KAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPD 327
KA + M + P+ VT YNA+I EA+EI R M + G+ P+
Sbjct: 408 KAKEVFLMMRKERRKPNVVT--------YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 328 AVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLS-HEDTFS 386
VS T++ R K KV +D + + +G++ + ++
Sbjct: 460 VVSVCTLLAACSR-------SKKKVNVDTV-------------LSAAQSRGINLNTAAYN 499
Query: 387 NLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISH 446
+ + Y+ LEKA L + ++ KK + +L IS
Sbjct: 500 SAIGSYINAAELEKAIAL------------------YQSMRKKKVKADSVTFTIL--ISG 539
Query: 447 VCL--RMPTFIIYDTLIENCSNNEFKSVVGLVK-GFGMRGLMKKAARAHDRMLEGNYKPD 503
C + P I Y +E+ S K V V + +G + +A ++M +PD
Sbjct: 540 SCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 599
Query: 504 GAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
Y ++ + KA ++++EM G P + AL+ A
Sbjct: 600 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 645
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 146/323 (45%), Gaps = 12/323 (3%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAE 100
+YN L+ A G AL +L + ++ D +YT L++ + Q KA +VF
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M P+V TYNA++ AY + EA+ I R + + G +PN++S L+ K
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+ +L +G+ L+ Y S I + N ++EKA + M K + D+ T+
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
LI C EA +EM + + Y+ ++ AY Q Q ++A + ++M G
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
PD + Y +++H ++ +A E+ M G+ PD+++ S ++ F +
Sbjct: 596 CEPDV--------IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Query: 341 IRELGKAYKLKVEMDKKSISWLG 363
+ + L M +K I + G
Sbjct: 648 GGQPSNVFVLMDLMREKEIPFTG 670
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/517 (21%), Positives = 203/517 (39%), Gaps = 67/517 (12%)
Query: 30 WTETEKT--NWKGLADETTYNKLVLACCRDGRVEEALGILRGMAE-----SDENTYTSLI 82
W E + +W G + L+ R G +E + + + M + + Y +I
Sbjct: 91 WEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMI 150
Query: 83 HLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFE 142
L D+A +F EM P TY+A++ A+ R ++R A+ ++ ++
Sbjct: 151 RLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIA 210
Query: 143 PNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEM 202
P+ ++N L+ G EA E+ ++M G+ D T+ ++ + + + KA
Sbjct: 211 PSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSY 270
Query: 203 KAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML--RRGLSPDNKTYTGLMSAY 260
M + PD T+ +I L S+A DLF M R PD T+T +M Y
Sbjct: 271 FELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLY 330
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
++ + + + M+ +G P+ V+YNA++ + + AL +L +
Sbjct: 331 SVKGEIENCRAVFEAMVAEGLKPNI--------VSYNALMGAYAVHGMSGTALSVLGDIK 382
Query: 321 EIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLS 380
+ G+ PD VSY+ ++ + R R+ GKA ++ + M K+ +
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE-------------------RRKP 423
Query: 381 HEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHL 440
+ T++ L+ Y + G L +A + R++ P V L
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL---------------- 467
Query: 441 LWFISHVCLRMPTFIIYDTLIE-------NCSNNEFKSVVGLVKGFGMRGLMKKAARAHD 493
C R + DT++ N + + S +G + ++KA +
Sbjct: 468 -----AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG---SYINAAELEKAIALYQ 519
Query: 494 RMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEM 530
M + K D + +LI CR +A EM
Sbjct: 520 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 39/256 (15%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKV 97
AD T+ L+ CR + EA+ L+ M + + Y+S++ + QGQ +A +
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 587
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
F +M G P V Y +++ AY +++ +A + + G EP+ I+ +AL++ F
Sbjct: 588 FNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Query: 158 KGK----------MEEAE-------------------------ELLQEMNQKGLALDDKT 182
G+ M E E +L+Q M+ +L
Sbjct: 648 GGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGL 707
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
++HLF GKVE ++ +++ G+ + TY L+ L + ++ + M
Sbjct: 708 TNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMS 767
Query: 243 RRGLSPDNKTYTGLMS 258
G+ P N+ Y ++S
Sbjct: 768 GAGIQPSNQMYRDIIS 783
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 122/320 (38%), Gaps = 32/320 (10%)
Query: 50 LVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEMIDTG 105
L+ AC R + +L N Y S I + + + +KA ++ M
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 525
Query: 106 FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
T+ ++ CR ++ EA+ L+ + + +++++ + +G++ EAE
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 585
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSL 225
+ +M G D YTS++H + K KA E+ EM GI PD+ L+ +
Sbjct: 586 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 645
Query: 226 CLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH-------------- 271
S F L M + + + + SA ++ +A
Sbjct: 646 NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 705
Query: 272 -LQDEMIH------------KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRG 318
L ++M+H K F +G+ + TY ++ L + + +E+L
Sbjct: 706 GLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEW 765
Query: 319 MPEIGLSPDAVSYSTVI-FG 337
M G+ P Y +I FG
Sbjct: 766 MSGAGIQPSNQMYRDIISFG 785
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/526 (23%), Positives = 222/526 (42%), Gaps = 58/526 (11%)
Query: 34 EKTNWKGLADETTYNKLVLACCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQG 89
E W D TY+ L+ A R G+ A+ + LR +TY +LI+ G
Sbjct: 36 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 95
Query: 90 QCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFN 149
+A +V +M D G P + T+N ++ AY +++ +AL + P+ +FN
Sbjct: 96 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 155
Query: 150 ALVQGFCGKGKMEEAEELLQEMNQKGLAL--DDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
++ G+ +A +L M +K D T+TS++HL+ KG++E + MV
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFS 267
+G+ P+ +Y L+G+ + A + ++ + G+ PD +YT L+++Y Q
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 268 KAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPD 327
KA + M + P+ VT YNA+I EA+EI R M + G+ P+
Sbjct: 276 KAKEVFLMMRKERRKPNVVT--------YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 327
Query: 328 AVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLS-HEDTFS 386
VS T++ R ++ KV +D + + +G++ + ++
Sbjct: 328 VVSVCTLLAACSRSKK-------KVNVDTV-------------LSAAQSRGINLNTAAYN 367
Query: 387 NLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISH 446
+ + Y+ LEKA L + ++ KK + +L IS
Sbjct: 368 SAIGSYINAAELEKAIAL------------------YQSMRKKKVKADSVTFTIL--ISG 407
Query: 447 VCL--RMPTFIIYDTLIENCSNNEFKSVVGLVK-GFGMRGLMKKAARAHDRMLEGNYKPD 503
C + P I Y +E+ S K V V + +G + +A ++M +PD
Sbjct: 408 SCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 467
Query: 504 GAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
Y ++ + KA ++++EM G P + AL+ A
Sbjct: 468 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 513
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 146/323 (45%), Gaps = 12/323 (3%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAE 100
+YN L+ A G AL +L + ++ D +YT L++ + Q KA +VF
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 283
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M P+V TYNA++ AY + EA+ I R + + G +PN++S L+ K
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 343
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+ +L +G+ L+ Y S I + N ++EKA + M K + D+ T+
Sbjct: 344 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 403
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
LI C EA +EM + + Y+ ++ AY Q Q ++A + ++M G
Sbjct: 404 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 463
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
PD + Y +++H ++ +A E+ M G+ PD+++ S ++ F +
Sbjct: 464 CEPDV--------IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 515
Query: 341 IRELGKAYKLKVEMDKKSISWLG 363
+ + L M +K I + G
Sbjct: 516 GGQPSNVFVLMDLMREKEIPFTG 538
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 185/464 (39%), Gaps = 60/464 (12%)
Query: 76 NTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRC 135
+ Y +I L D+A +F EM P TY+A++ A+ R ++R A+ ++
Sbjct: 12 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 71
Query: 136 LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
++ P+ ++N L+ G EA E+ ++M G+ D T+ ++ + + +
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML--RRGLSPDNKTY 253
KA M + PD T+ +I L S+A DLF M R PD T+
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
T +M Y ++ + + + M+ +G P+ V+YNA++ + + AL
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI--------VSYNALMGAYAVHGMSGTAL 243
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDK 373
+L + + G+ PD VSY+ ++ + R R+ GKA ++ + M K+
Sbjct: 244 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE---------------- 287
Query: 374 SVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARI 433
+ + T++ L+ Y + G L +A + R++ P V L
Sbjct: 288 ---RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL--------- 335
Query: 434 TEAKHHLLWFISHVCLRMPTFIIYDTLIE-------NCSNNEFKSVVGLVKGFGMRGLMK 486
C R + DT++ N + + S +G + ++
Sbjct: 336 ------------AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG---SYINAAELE 380
Query: 487 KAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEM 530
KA + M + K D + +LI CR +A EM
Sbjct: 381 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 39/256 (15%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKV 97
AD T+ L+ CR + EA+ L+ M + + Y+S++ + QGQ +A +
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 455
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
F +M G P V Y +++ AY +++ +A + + G EP+ I+ +AL++ F
Sbjct: 456 FNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 515
Query: 158 KGK----------MEEAE-------------------------ELLQEMNQKGLALDDKT 182
G+ M E E +L+Q M+ +L
Sbjct: 516 GGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGL 575
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
++HLF GKVE ++ +++ G+ + TY L+ L + ++ + M
Sbjct: 576 TNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMS 635
Query: 243 RRGLSPDNKTYTGLMS 258
G+ P N+ Y ++S
Sbjct: 636 GAGIQPSNQMYRDIIS 651
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 135/349 (38%), Gaps = 43/349 (12%)
Query: 173 QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLS 232
QK + Y +I L V++A + EM PDA+TY LI +
Sbjct: 4 QKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWR 63
Query: 233 EAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTS 292
A +L +MLR ++P TY L++A + +A + +M G PD
Sbjct: 64 WAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL------- 116
Query: 293 HVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKV 352
VT+N ++ + +AL M + PD +++ +I+ ++ + +A L
Sbjct: 117 -VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Query: 353 EMDKKS----------ISWLGLWGLYDDID--KSVMQGLSHED------TFSNLMSDYLA 394
M +K S + L+ + +I+ ++V + + E +++ LM Y
Sbjct: 176 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 235
Query: 395 EGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTF 454
G A + +I +P V Y+ LN + + +AK L R P
Sbjct: 236 HGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE--RRKPNV 293
Query: 455 IIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPD 503
+ Y+ LI+ +G G + +A +M + KP+
Sbjct: 294 VTYNALID---------------AYGSNGFLAEAVEIFRQMEQDGIKPN 327
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 147/371 (39%), Gaps = 45/371 (12%)
Query: 207 VHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF 266
+ K D Y +I + +A LF EM + PD +TY L++A+ Q+
Sbjct: 3 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 62
Query: 267 SKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSP 326
A +L D+M+ P S TYN +I+ EALE+ + M + G+ P
Sbjct: 63 RWAMNLMDDMLRAAIAP--------SRSTYNNLINACGSSGNWREALEVCKKMTDNGVGP 114
Query: 327 DAVSYSTVIFGFCRIRELGKAYK-------LKVEMDKKS-------ISWLG----LWGLY 368
D V+++ V+ + R+ KA KV D + +S LG L+
Sbjct: 115 DLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 174
Query: 369 DDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLN 428
+ + + + TF+++M Y +G +E + + P V Y+ +
Sbjct: 175 NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY- 233
Query: 429 KKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKA 488
A H + S L + I + +I + S L+ +G KA
Sbjct: 234 -------AVHGM----SGTALSVLGDIKQNGIIP-----DVVSYTCLLNSYGRSRQPGKA 277
Query: 489 ARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
M + KP+ YN LI + G + +A +++ +M G P++ SV L+ A
Sbjct: 278 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 337
Query: 549 LCCVRRYNKMS 559
C R K++
Sbjct: 338 --CSRSKKKVN 346
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 122/320 (38%), Gaps = 32/320 (10%)
Query: 50 LVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEMIDTG 105
L+ AC R + +L N Y S I + + + +KA ++ M
Sbjct: 334 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 393
Query: 106 FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
T+ ++ CR ++ EA+ L+ + + +++++ + +G++ EAE
Sbjct: 394 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 453
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSL 225
+ +M G D YTS++H + K KA E+ EM GI PD+ L+ +
Sbjct: 454 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 513
Query: 226 CLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH-------------- 271
S F L M + + + + SA ++ +A
Sbjct: 514 NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 573
Query: 272 -LQDEMIH------------KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRG 318
L ++M+H K F +G+ + TY ++ L + + +E+L
Sbjct: 574 GLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEW 633
Query: 319 MPEIGLSPDAVSYSTVI-FG 337
M G+ P Y +I FG
Sbjct: 634 MSGAGIQPSNQMYRDIISFG 653
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 8/276 (2%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
E D T +SL++ FC A V +M G V ++ C+++ AL
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+L+ + +RG PN++++++L+ G C G++ +AE L EM+ K + + T+++LI +
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
+GK+ K + M+ I P+ TY LI LC+ + EA + M+ +G +P+
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
TY+ L + + ++ L D+M + G++ + V+ N +I G + +
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQR--------GVAANTVSCNTLIKGYFQAGKIDL 241
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA 347
AL + M GL P+ SY+ V+ G E+ KA
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 277
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 118/225 (52%), Gaps = 8/225 (3%)
Query: 136 LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
+++ G EP++++ ++LV GFC +++A + +M + G+ D T LI C
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
V A E+ M +GI P+ TY LI LC L++A EM + ++P+ T++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
L+ AY + + SK + MI P+ T Y+++I+GLC+ +R +EA+++
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFT--------YSSLIYGLCMHNRVDEAIKM 175
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
L M G +P+ V+YST+ GF + + KL +M ++ ++
Sbjct: 176 LDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVA 220
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 136/285 (47%), Gaps = 14/285 (4%)
Query: 6 VLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLA-DETTYNKLVLACCRDGRVEEAL 64
+L T +NR+ P A ++ +G++ + TY+ L+ C+ GR+ +A
Sbjct: 53 ILIDTLCKNRLVVP---------ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAE 103
Query: 65 GILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAY 120
L M N T+++LI + +G+ K V+ MI P+V TY++++
Sbjct: 104 RRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGL 163
Query: 121 CRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDD 180
C R EA+ +L +I +G PN+++++ L GF ++++ +LL +M Q+G+A +
Sbjct: 164 CMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANT 223
Query: 181 KTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQE 240
+ +LI + GK++ A + M G++P+ +Y ++ L + +A F+
Sbjct: 224 VSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEH 283
Query: 241 MLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDF 285
M + D TYT ++ +A+ L ++ K PDF
Sbjct: 284 MQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDF 328
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 140/324 (43%), Gaps = 31/324 (9%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
D T + LV C +++A+ + M + D T LI C A +V
Sbjct: 12 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 71
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M D G SP+V TY++++ C+ R +A L + + PN+I+F+AL+ + +
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 131
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+ + + + + M Q + + TY+SLI+ C +V++A +M M+ KG P+ TY
Sbjct: 132 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 191
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
L + + L +M +RG++ + + L+ Y + A + M
Sbjct: 192 STLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS 251
Query: 279 KGFLPDF------VTGISTSH---------------------VTYNAIIHGLCLLDRAEE 311
G +P+ + G+ + +TY +IHG+C +E
Sbjct: 252 NGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKE 311
Query: 312 ALEILRGMPEIGLSPDAVSYSTVI 335
A ++ + + PD +Y+ +I
Sbjct: 312 AYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 121/239 (50%), Gaps = 8/239 (3%)
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
+M+ G P + T +++V +C ++A+ + + + G + +++ L+ C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ A E+L+ M +G++ + TY+SLI C G++ A EM K I P+ T+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
LI + + LS+ +++ M++ + P+ TY+ L+ + + +A + D MI K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
G P+ VTY+ + +G R ++ +++L MP+ G++ + VS +T+I G+
Sbjct: 183 GCTPNV--------VTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY 233
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TY+ L+ C RV+EA+ +L M + TY++L + F + D K+ +M
Sbjct: 155 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 214
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G + + + N ++ Y + + ALG+ + G PN+ S+N ++ G G++
Sbjct: 215 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 274
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
E+A + M + LD TYT +IH C V++A+++ ++ K + PD Y +
Sbjct: 275 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 334
Query: 222 IGSLCLQQTLSEAFDL---FQEMLRRGLS 247
I L +EA L +Q+ +R+ S
Sbjct: 335 IAELNRAGMRTEADALNRFYQKHVRQNES 363
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 123/335 (36%), Gaps = 57/335 (17%)
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
+M++ G+ PD T + L++ + L A ++ +M G D V +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVD--------TIL 54
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
I LC ALE+L+ M + G+SP+ V+YS++I G C+ L A + EMD K I
Sbjct: 55 IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 114
Query: 360 SWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVH 419
+ + TFS L+ Y G L K + + + P
Sbjct: 115 N-------------------PNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFT 155
Query: 420 YSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKS-------- 471
YS + L R+ EA L IS C P + Y TL +N FKS
Sbjct: 156 YSSLIYGLCMHNRVDEAIKMLDLMISKGC--TPNVVTYSTL----ANGFFKSSRVDDGIK 209
Query: 472 ----------------VVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHC 515
L+KG+ G + A M P+ YN+++
Sbjct: 210 LLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLF 269
Query: 516 RCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
G V KA + M + + +I +C
Sbjct: 270 ANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMC 304
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 197/459 (42%), Gaps = 40/459 (8%)
Query: 43 DETTYNKLVLACCRDGRVEEALGI---LRGMAESDENT-------YTSLIHLFCDQGQCD 92
D T L+ C+ RV+EAL + +RG D N + +LI C G+
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 93 KAYKVFAEM-IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
+A ++ M ++ P+ TYN ++ YCR + A ++ + E +PN+++ N +
Sbjct: 388 EAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTI 447
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
V G C + A +M ++G+ + TY +LIH C+ VEKA +M+ G
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGC 507
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
PDA Y LI LC + +A + +++ G S D Y L+ + + K +
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYE 567
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
+ +M +G PD +TYN +I E ++ M E GL P +Y
Sbjct: 568 MLTDMEKEGKKPD--------SITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 332 STVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSD 391
VI +C + EL +A KL +M GL+ ++ + + ++ L++
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDM-----------GLHSKVNPNTV-------IYNILINA 661
Query: 392 YLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRM 451
+ G+ +A L+ E+ P Y+ LN+K + + + C
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC--E 719
Query: 452 PTFIIYDTLIENCS-NNEFKSVVGLVKGFGMRGLMKKAA 489
P I + L+E S ++E + ++G+ + +KA+
Sbjct: 720 PNQITMEILMERLSGSDELVKLRKFMQGYSVASPTEKAS 758
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 147/324 (45%), Gaps = 14/324 (4%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAESDE-----NTYTSLIHLFCDQGQCDKAYK 96
AD +N L+ C+ GR++EA +L M + TY LI +C G+ + A +
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
V + M + P+V T N IV CR A+ + + G + N++++ L+ C
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+E+A ++M + G + D K Y +LI C + A + ++ G D
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
Y LIG C + + +++ +M + G PD+ TY L+S + F + ++M
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP-EIGLSPDAVSYSTVI 335
G P + TY A+I C + +EAL++ + M ++P+ V Y+ +I
Sbjct: 608 REDGLDP--------TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILI 659
Query: 336 FGFCRIRELGKAYKLKVEMDKKSI 359
F ++ G+A LK EM K +
Sbjct: 660 NAFSKLGNFGQALSLKEEMKMKMV 683
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/515 (22%), Positives = 198/515 (38%), Gaps = 95/515 (18%)
Query: 49 KLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDT 104
+ + + C++ R A IL + ++ + + +L+ + + +M +
Sbjct: 264 RFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEV 323
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG--------FEPNLISFNALVQGFC 156
P V T ++ C+ +R EAL + + RG + + I FN L+ G C
Sbjct: 324 KIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 157 GKGKMEEAEELLQEMNQKGLALDDK-TYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
G+++EAEELL M + + + TY LI +C GK+E A E+ + M I P+
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
T ++G +C L+ A F +M + G+
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV----------------------------- 472
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
KG + VTY +IH C + E+A+ M E G SPDA Y +I
Sbjct: 473 ---KGNV-----------VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 336 FGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAE 395
G C++R A ++ VE K+ L L ++ L+ + +
Sbjct: 519 SGLCQVRRDHDAIRV-VEKLKEGGFSLDLLA------------------YNMLIGLFCDK 559
Query: 396 GHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFI 455
+ EK Y + ++ P + Y+ ++ K E+ ++ + L PT
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF-ESVERMMEQMREDGLD-PTVT 617
Query: 456 IYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDH 514
Y +I+ CS E + L K G L P+ +YN+LI
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMG---------------LHSKVNPNTVIYNILINAF 662
Query: 515 CRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+ GN +A + EM P++ + AL + L
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/501 (18%), Positives = 194/501 (38%), Gaps = 86/501 (17%)
Query: 56 RDGRVEEALGILRGMAESDENTYTS--LIHLFCDQGQCDKAYKVFAEMI--DTGFSPSVA 111
R G V +++ + + + +N+ ++ + G D A+KV EM+ ++ F P+
Sbjct: 164 RMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRI 223
Query: 112 TYNAIVLAYCRDKRFREA--LGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
T + ++ +++ E + ++ G PN + + C + A ++L
Sbjct: 224 TADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILS 283
Query: 170 EMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQ 229
++ + L+ + +L+ + + ++ +M I PD T G LI +LC +
Sbjct: 284 DLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSR 343
Query: 230 TLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGI 289
+ EA ++F++M RG D+ I
Sbjct: 344 RVDEALEVFEQM--RGKRTDDGNV-----------------------------------I 366
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMP-EIGLSPDAVSYSTVIFGFCRIRELGKAY 348
+ +N +I GLC + R +EA E+L M E P+AV+Y+ +I G+CR +L A
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA- 425
Query: 349 KLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREI 408
K V+ + ++ N+++ G + + + L +
Sbjct: 426 ------------------------KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 409 NYF---DYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCS 465
+F + V + ++ +++ ++ + + W Y+ ++E
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW--------------YEKMLEAGC 507
Query: 466 NNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYD 525
+ + K L+ G A R +++ EG + D YN+LI C N K Y+
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYE 567
Query: 526 MYMEMVHYGFAPHMFSVLALI 546
M +M G P + LI
Sbjct: 568 MLTDMEKEGKKPDSITYNTLI 588
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 141/338 (41%), Gaps = 48/338 (14%)
Query: 231 LSEAFDLFQEMLRR-GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT-G 288
+ +AF + EML++ + P N+ ++ L + + ++++I + F + G
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIV----LHEVWKERLLTEEKII--ALISRFSSHG 254
Query: 289 ISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
+S + V I LC RA A +IL + + +A ++ ++ R ++ +
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 349 KLKVEMDKKSI--SWLGLWGLYDDIDKS--VMQGLSHEDTFSNLMSDYLAEGHLEKAYLL 404
L ++MD+ I + L L + + KS V + L + F + +G++ KA
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL---EVFEQMRGKRTDDGNVIKAD-- 369
Query: 405 EREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWF-ISHVCLRMPTFIIYDTLIEN 463
+H++ ++ L K R+ EA+ L+ + C+ P + Y N
Sbjct: 370 ------------SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV--PNAVTY-----N 410
Query: 464 CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKA 523
C L+ G+ G ++ A RM E KP+ N ++ CR ++ A
Sbjct: 411 C----------LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Query: 524 YDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNK-MSW 560
+M+M G ++ + + LI A C V K M W
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 211/477 (44%), Gaps = 50/477 (10%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
+ T L+++ ++G+ +A VF + +TG PS+ +Y ++ A K++ I+ +
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+ G + + I FNA++ F G ME+A + L +M + GL TY +LI + GK
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 197 EKAFEMKAEMVHKG---ILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
E++ E+ M+ +G + P+ T+ L+ + C ++ + EA+++ ++M G+ PD TY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
+ + Y Q + + E++ K + + + T ++ G C R + L
Sbjct: 227 NTIATCY---VQKGETVRAESEVVEKMVMKE---KAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDK 373
+R M E+ + + V ++++I GF + MD+ I + ++
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEV------------MDRDGIDEVLTLMKECNVKA 328
Query: 374 SVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVH-YSVFLNVLNKKAR 432
V+ T+S +M+ + + G++EKA + +E+ P D H YS+ +
Sbjct: 329 DVI-------TYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP-DAHAYSILAKGYVRAKE 380
Query: 433 ITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARA 491
+A+ L I P +I+ T+I CSN G M A R
Sbjct: 381 PKKAEELLETLIVE---SRPNVVIFTTVISGWCSN----------------GSMDDAMRV 421
Query: 492 HDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
++M + P+ + L++ + KA ++ M G P + L L EA
Sbjct: 422 FNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEA 478
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 139/292 (47%), Gaps = 15/292 (5%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAE- 100
T+N LV A C+ +VEEA +++ M E D TY ++ + +G+ +A E
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 101 -MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
++ P+ T +V YCR+ R R+ L +R + E E NL+ FN+L+ GF
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVM 309
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ +E+L M + + D TY+++++ + + G +EKA ++ EMV G+ PDA Y
Sbjct: 310 DRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 369
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
L + +A +L + ++ P+ +T ++S + A + ++M
Sbjct: 370 ILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKF 428
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
G P+ T+ ++ G + + +A E+L+ M G+ P+ ++
Sbjct: 429 GVSPNI--------KTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 154/343 (44%), Gaps = 40/343 (11%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEM 101
+ KL+ GR EA + + +AE+ +YT+L+ Q Q + +E+
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+G +NA++ A+ +A+ L + E G P ++N L++G+ GK
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 162 EEAEELLQEMNQKG---LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
E + ELL M ++G + + +T+ L+ +C K KVE+A+E+ +M G+ PD TY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 219 GPLIGSLCLQQ---TLSEAFDLFQEML--------------------RRGLSPDNKTYTG 255
+ + C Q T+ ++ ++M+ R G D +
Sbjct: 227 NTI--ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 256 LMSAYRLQAQ---FSKAFHLQDEMIHKGFLPDFVT-----GISTSHVTYNAIIHGLCLLD 307
M R++A F+ + E++ + + + +T + +TY+ +++
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAG 344
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
E+A ++ + M + G+ PDA +YS + G+ R +E KA +L
Sbjct: 345 YMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 387
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 125/533 (23%), Positives = 221/533 (41%), Gaps = 55/533 (10%)
Query: 39 KGLA-DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDK 93
KGL DE T + ++ AC R+G + EA + E TY +L+ +F G +
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A V EM + TYN +V AY R +EA G++ + ++G PN I++ ++
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
+ GK +EA +L M + G + TY +++ L K + + +M +M G P
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Query: 214 DADTYGPLIGSLCLQQTLSEAFD-LFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHL 272
+ T+ ++ +LC + + + + +F+EM G PD T+ L+SAY A +
Sbjct: 455 NRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 273 QDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYS 332
EM GF + TYNA+++ L ++ M G P SYS
Sbjct: 514 YGEMTRAGF--------NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Query: 333 TVIFGFCRIRELGKAYKLKVEMDKKSI--SWLGLWGLYDDIDKSVMQGLSHEDTFSNLMS 390
++ + + +++ + + I SW+ L L +N
Sbjct: 566 LMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLL----------------LANFKC 609
Query: 391 DYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR 450
LA E+A+ L ++ Y P V ++ L++ + +A+ +L I L
Sbjct: 610 RALAGS--ERAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAE-GILESIREDGLS 663
Query: 451 MPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLL 510
P + Y++L++ + RG KA + + KPD YN +
Sbjct: 664 -PDLVTYNSLMDM---------------YVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Query: 511 IFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQ 563
I CR G + +A M EM G P +F+ + + + ++ VI+
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIE 760
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 183/457 (40%), Gaps = 90/457 (19%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKV 97
AD TYN+LV A R G +EA G++ M + + TYT++I + G+ D+A K+
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
F M + G P+ TYNA++ + R E + +L + G PN ++N ++ CG
Sbjct: 409 FYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCG 467
Query: 158 KGKMEE-AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
M++ + +EM G D T+ +LI + G A +M EM G
Sbjct: 468 NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVT 527
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY---------------- 260
TY L+ +L + ++ +M +G P +Y+ ++ Y
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587
Query: 261 ----------------------RLQAQFSKAFHLQDEMIHKGFLPDFVT----------- 287
R A +AF L G+ PD V
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCRALAGSERAFTL---FKKHGYKPDMVIFNSMLSIFTRN 644
Query: 288 ----------------GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
G+S VTYN+++ +A EIL+ + + L PD VSY
Sbjct: 645 NMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSY 704
Query: 332 STVIFGFCRIRELGKAYKLKVEMDKKSI--------------SWLGLWGLYDDIDKSVMQ 377
+TVI GFCR + +A ++ EM ++ I + +G++ +D+ + + +
Sbjct: 705 NTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK 764
Query: 378 G--LSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFD 412
+E TF ++ Y G +A +I FD
Sbjct: 765 NDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 801
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 160/387 (41%), Gaps = 45/387 (11%)
Query: 164 AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIG 223
A +LL ++ + LD + YT+++H + GK EKA ++ M G P TY ++
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 224 SLC-LQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
+ ++ + + EM +GL D T + ++SA + +A E+ G+
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
P VTYNA++ EAL +L+ M E D+V+Y+ ++ + R
Sbjct: 314 P--------GTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 343 ELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAY 402
+A + M KK + + + T++ ++ Y G ++A
Sbjct: 366 FSKEAAGVIEMMTKKGV-------------------MPNAITYTTVIDAYGKAGKEDEAL 406
Query: 403 LLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIE 462
L + +P Y+ L++L KK+R E L S+ C P ++T++
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC--SPNRATWNTMLA 464
Query: 463 NCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHK 522
C N +G+ K R M ++PD +N LI + RCG+
Sbjct: 465 LCGN---------------KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVD 509
Query: 523 AYDMYMEMVHYGFAPHMFSVLALIEAL 549
A MY EM GF + + AL+ AL
Sbjct: 510 ASKMYGEMTRAGFNACVTTYNALLNAL 536
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 102/194 (52%), Gaps = 5/194 (2%)
Query: 92 DKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
++A+ +F + G+ P + +N+++ + R+ + +A GIL + E G P+L+++N+L
Sbjct: 616 ERAFTLFKKH---GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
+ + +G+ +AEE+L+ + + L D +Y ++I FC +G +++A M +EM +GI
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
P TY + +E D+ + M + P+ T+ ++ Y ++S+A
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD 792
Query: 272 LQDEMIHKGFLPDF 285
++ K F P F
Sbjct: 793 FVSKI--KTFDPCF 804
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
Query: 3 LLRVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEE 62
LLR L + R + G A+T +K +K D +N ++ R+ ++
Sbjct: 598 LLRTLLLANFKCRA------LAGSERAFTLFKKHGYK--PDMVIFNSMLSIFTRNNMYDQ 649
Query: 63 ALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVL 118
A GIL + E D TY SL+ ++ +G+C KA ++ + + P + +YN ++
Sbjct: 650 AEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIK 709
Query: 119 AYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLAL 178
+CR +EA+ +L + ERG P + ++N V G+ G E E++++ M +
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRP 769
Query: 179 DDKTYTSLIHLFCNKGKVEKAFEMKAEM 206
++ T+ ++ +C GK +A + +++
Sbjct: 770 NELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D TYN L+ R G +A IL+ + +S D +Y ++I FC +G +A ++
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRML 724
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+EM + G P + TYN V Y F E ++ C+ + PN ++F +V G+C
Sbjct: 725 SEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRA 784
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSL 186
GK EA + + ++ DD++ L
Sbjct: 785 GKYSEAMDFVSKIKTFDPCFDDQSIQRL 812
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 208/476 (43%), Gaps = 55/476 (11%)
Query: 69 GMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFRE 128
G D + T L++ ++G+ +A+ +F +I+ G PS+ TY +V A R K F
Sbjct: 313 GTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHS 372
Query: 129 ALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
L ++ + + G +P+ I FNA++ G +++A ++ ++M + G T+ +LI
Sbjct: 373 LLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIK 432
Query: 189 LFCNKGKVEKAFEMKAEMVHKGIL-PDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
+ GK+E++ + M+ +L P+ T L+ + C Q+ + EA+++ +M G+
Sbjct: 433 GYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVK 492
Query: 248 PDNKTYTGLMSAY-RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLL 306
PD T+ L AY R+ + + + M+H P+ T I++G C
Sbjct: 493 PDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV--------RTCGTIVNGYCEE 544
Query: 307 DRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWG 366
+ EEAL M E+G+ P+ ++++I GF I ++ ++ M++ +G
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE--------FG 596
Query: 367 LYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLP----VDVHYSV 422
+ D+ TFS LM+ + + G +++ EI Y D L D+H
Sbjct: 597 VKPDV-----------VTFSTLMNAWSSVGDMKRC----EEI-YTDMLEGGIDPDIHAFS 640
Query: 423 FLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMR 482
L +A E +L + +R P +IY +I G+
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVR-PNVVIYTQIIS---------------GWCSA 684
Query: 483 GLMKKAARAHDRMLE-GNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP 537
G MKKA + + +M P+ Y LI+ KA ++ +M P
Sbjct: 685 GEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 156/322 (48%), Gaps = 15/322 (4%)
Query: 45 TTYNKLVLACCRDGRVEEALGILR-----GMAESDENTYTSLIHLFCDQGQCDKAYKVFA 99
+T+N L+ + G++EE+ +L M + ++ T L+ +C+Q + ++A+ +
Sbjct: 425 STFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVY 484
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALG-ILRCLIERGFEPNLISFNALVQGFCGK 158
+M G P V T+N + AY R A I+ ++ +PN+ + +V G+C +
Sbjct: 485 KMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE 544
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GKMEEA M + G+ + + SLI F N ++ E+ M G+ PD T+
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
L+ + + +++ +ML G+ PD ++ L Y + KA + ++M
Sbjct: 605 STLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEI-GLSPDAVSYSTVIFG 337
G P+ V Y II G C ++A+++ + M I GLSP+ +Y T+I+G
Sbjct: 665 FGVRPNVVI--------YTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWG 716
Query: 338 FCRIRELGKAYKLKVEMDKKSI 359
F ++ KA +L +M+ K++
Sbjct: 717 FGEAKQPWKAEELLKDMEGKNV 738
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 12/305 (3%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQ-CDKAYK 96
++ T N LV A C ++EEA I+ M + D T+ +L + G C
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+ M+ P+V T IV YC + + EAL + E G PNL FN+L++GF
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL 577
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
M+ E++ M + G+ D T+++L++ + + G +++ E+ +M+ GI PD
Sbjct: 578 NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIH 637
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
+ L +A + +M + G+ P+ YT ++S + + KA + +M
Sbjct: 638 AFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
+ G+S + TY +I G + +A E+L+ M + P + +
Sbjct: 698 CG-------IVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 750
Query: 337 GFCRI 341
G+ I
Sbjct: 751 GWKSI 755
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 174/401 (43%), Gaps = 37/401 (9%)
Query: 43 DETTYNKLVLACCRDGRVEEALGI---LRGMAESDENT-------YTSLIHLFCDQGQCD 92
D T L+ C+ RV+EAL + +RG D N + +LI C G+
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 93 KAYKVFAEM-IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
+A ++ M ++ P+ TYN ++ YCR + A ++ + E +PN+++ N +
Sbjct: 388 EAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTI 447
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
V G C + A +M ++G+ + TY +LIH C+ VEKA +M+ G
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGC 507
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
PDA Y LI LC + +A + +++ G S D Y L+ + + K +
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYE 567
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
+ +M +G PD +TYN +I E ++ M E GL P +Y
Sbjct: 568 MLTDMEKEGKKPD--------SITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 332 STVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSD 391
VI +C + EL +A KL +M GL+ ++ + + ++ L++
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDM-----------GLHSKVNPNTV-------IYNILINA 661
Query: 392 YLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKAR 432
+ G+ +A L+ E+ P Y+ LN+K +
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 147/324 (45%), Gaps = 14/324 (4%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAESDE-----NTYTSLIHLFCDQGQCDKAYK 96
AD +N L+ C+ GR++EA +L M + TY LI +C G+ + A +
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
V + M + P+V T N IV CR A+ + + G + N++++ L+ C
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+E+A ++M + G + D K Y +LI C + A + ++ G D
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
Y LIG C + + +++ +M + G PD+ TY L+S + F + ++M
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP-EIGLSPDAVSYSTVI 335
G P + TY A+I C + +EAL++ + M ++P+ V Y+ +I
Sbjct: 608 REDGLDP--------TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILI 659
Query: 336 FGFCRIRELGKAYKLKVEMDKKSI 359
F ++ G+A LK EM K +
Sbjct: 660 NAFSKLGNFGQALSLKEEMKMKMV 683
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 13/282 (4%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
T N +V CR + A+ M + + TY +LIH C +KA + +
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M++ G SP Y A++ C+ +R +A+ ++ L E GF +L+++N L+ FC K
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
E+ E+L +M ++G D TY +LI F E M +M G+ P TYG
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 221 LIGSLCLQQTLSEAFDLFQEM-LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
+I + C L EA LF++M L ++P+ Y L++A+ F +A L++EM K
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPE 321
P+ TYNA+ L + E L+++ M E
Sbjct: 682 MVRPNV--------ETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/515 (22%), Positives = 198/515 (38%), Gaps = 95/515 (18%)
Query: 49 KLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDT 104
+ + + C++ R A IL + ++ + + +L+ + + +M +
Sbjct: 264 RFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEV 323
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG--------FEPNLISFNALVQGFC 156
P V T ++ C+ +R EAL + + RG + + I FN L+ G C
Sbjct: 324 KIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 157 GKGKMEEAEELLQEMNQKGLALDDK-TYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
G+++EAEELL M + + + TY LI +C GK+E A E+ + M I P+
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
T ++G +C L+ A F +M + G+
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV----------------------------- 472
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
KG + VTY +IH C + E+A+ M E G SPDA Y +I
Sbjct: 473 ---KGNV-----------VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 336 FGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAE 395
G C++R A ++ VE K+ L L ++ L+ + +
Sbjct: 519 SGLCQVRRDHDAIRV-VEKLKEGGFSLDLLA------------------YNMLIGLFCDK 559
Query: 396 GHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFI 455
+ EK Y + ++ P + Y+ ++ K E+ ++ + L PT
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF-ESVERMMEQMREDGLD-PTVT 617
Query: 456 IYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDH 514
Y +I+ CS E + L K G L P+ +YN+LI
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMG---------------LHSKVNPNTVIYNILINAF 662
Query: 515 CRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+ GN +A + EM P++ + AL + L
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/501 (18%), Positives = 194/501 (38%), Gaps = 86/501 (17%)
Query: 56 RDGRVEEALGILRGMAESDENTYTS--LIHLFCDQGQCDKAYKVFAEMI--DTGFSPSVA 111
R G V +++ + + + +N+ ++ + G D A+KV EM+ ++ F P+
Sbjct: 164 RMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRI 223
Query: 112 TYNAIVLAYCRDKRFREA--LGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
T + ++ +++ E + ++ G PN + + C + A ++L
Sbjct: 224 TADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILS 283
Query: 170 EMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQ 229
++ + L+ + +L+ + + ++ +M I PD T G LI +LC +
Sbjct: 284 DLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSR 343
Query: 230 TLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGI 289
+ EA ++F++M RG D+ I
Sbjct: 344 RVDEALEVFEQM--RGKRTDDGNV-----------------------------------I 366
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMP-EIGLSPDAVSYSTVIFGFCRIRELGKAY 348
+ +N +I GLC + R +EA E+L M E P+AV+Y+ +I G+CR +L A
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA- 425
Query: 349 KLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREI 408
K V+ + ++ N+++ G + + + L +
Sbjct: 426 ------------------------KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 409 NYF---DYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCS 465
+F + V + ++ +++ ++ + + W Y+ ++E
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW--------------YEKMLEAGC 507
Query: 466 NNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYD 525
+ + K L+ G A R +++ EG + D YN+LI C N K Y+
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYE 567
Query: 526 MYMEMVHYGFAPHMFSVLALI 546
M +M G P + LI
Sbjct: 568 MLTDMEKEGKKPDSITYNTLI 588
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 141/338 (41%), Gaps = 48/338 (14%)
Query: 231 LSEAFDLFQEMLRR-GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT-G 288
+ +AF + EML++ + P N+ ++ L + + ++++I + F + G
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIV----LHEVWKERLLTEEKII--ALISRFSSHG 254
Query: 289 ISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
+S + V I LC RA A +IL + + +A ++ ++ R ++ +
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 349 KLKVEMDKKSI--SWLGLWGLYDDIDKS--VMQGLSHEDTFSNLMSDYLAEGHLEKAYLL 404
L ++MD+ I + L L + + KS V + L + F + +G++ KA
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL---EVFEQMRGKRTDDGNVIKAD-- 369
Query: 405 EREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWF-ISHVCLRMPTFIIYDTLIEN 463
+H++ ++ L K R+ EA+ L+ + C+ P + Y N
Sbjct: 370 ------------SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV--PNAVTY-----N 410
Query: 464 CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKA 523
C L+ G+ G ++ A RM E KP+ N ++ CR ++ A
Sbjct: 411 C----------LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Query: 524 YDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNK-MSW 560
+M+M G ++ + + LI A C V K M W
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 165/354 (46%), Gaps = 24/354 (6%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
T N LV A C+ +E A +L + + TYT+++ + +G + A +V EM
Sbjct: 193 TCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+D G+ P TY ++ YC+ RF EA ++ + + EPN +++ +++ C + K
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
EA + EM ++ D +I C KV++A + +M+ +PD L
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL 372
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I LC + ++EA LF E +G P TY L++ + + ++A L D+M +
Sbjct: 373 IHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKC 431
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
P+ TYN +I GL +E + +L M EIG P+ ++ + G ++
Sbjct: 432 KPN--------AFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKL 483
Query: 342 RELGKAYK------LKVEMDKKSISW-LGLWGLYDDIDKSV--MQGLSHEDTFS 386
+ A K + ++DK+ SW L L ++DK V ++ L HE + S
Sbjct: 484 GKEEDAMKIVSMAVMNGKVDKE--SWELFLKKFAGELDKGVLPLKELLHEISVS 535
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 138/279 (49%), Gaps = 10/279 (3%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRC 135
+ +L+++ + D + +F ++ G +P++ T N +V A C+ A +L
Sbjct: 157 SLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDE 216
Query: 136 LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
+ G PNL+++ ++ G+ +G ME A+ +L+EM +G D TYT L+ +C G+
Sbjct: 217 IPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGR 276
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
+A + +M I P+ TYG +I +LC ++ EA ++F EML R PD+
Sbjct: 277 FSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCK 336
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
++ A + +A L +M+ +PD + + +IH LC R EA ++
Sbjct: 337 VIDALCEDHKVDEACGLWRKMLKNNCMPD--------NALLSTLIHWLCKEGRVTEARKL 388
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
E G P ++Y+T+I G C EL +A +L +M
Sbjct: 389 FDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDM 426
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 207/478 (43%), Gaps = 58/478 (12%)
Query: 81 LIHLFCDQGQCDKAYKVF--AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
L+ + Q D A ++F A GF+ + TY++I+ R + F + + L +
Sbjct: 52 LVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAF-DPVESLMADLR 110
Query: 139 RGFEP-----NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ P NL F L++ + G+ E + + + G+ ++ +L+++
Sbjct: 111 NSYPPIKCGENL--FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQN 168
Query: 194 GKVEKAFEM-KAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKT 252
+ + M K GI P+ T L+ +LC + + A+ + E+ GL P+ T
Sbjct: 169 QRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVT 228
Query: 253 YTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEA 312
YT ++ Y + A + +EM+ +G+ PD TY ++ G C L R EA
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWYPD--------ATTYTVLMDGYCKLGRFSEA 280
Query: 313 LEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDID 372
++ M + + P+ V+Y +I C+ ++ G+A + EM ++
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM----------------LE 324
Query: 373 KSVMQGLSHEDTFSNLMSDYLAEGH-LEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKA 431
+S M + + + D L E H +++A L R++ + +P + S ++ L K+
Sbjct: 325 RSFMP----DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Query: 432 RITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARA 491
R+TEA+ F +P+ + Y+TLI G +G + +A R
Sbjct: 381 RVTEARKLFDEFEKG---SIPSLLTYNTLI---------------AGMCEKGELTEAGRL 422
Query: 492 HDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
D M E KP+ YN+LI + GNV + + EM+ G P+ + L L E L
Sbjct: 423 WDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGL 480
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 163/363 (44%), Gaps = 29/363 (7%)
Query: 75 ENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILR 134
EN + L+ + G+ + + ++F + D G SV + N ++ +++RF + +
Sbjct: 120 ENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFK 179
Query: 135 CLIER-GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
E G PN+ + N LV+ C K +E A ++L E+ GL + TYT+++ + +
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
G +E A + EM+ +G PDA TY L+ C SEA + +M + + P+ TY
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTY 299
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
++ A + + +A ++ DEM+ + F+PD +I LC + +EA
Sbjct: 300 GVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCK--------VIDALCEDHKVDEAC 351
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDK 373
+ R M + PD ST+I C+ + +A KL E +K SI L
Sbjct: 352 GLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLL---------- 401
Query: 374 SVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARI 433
T++ L++ +G L +A L ++ P Y+V + L+K +
Sbjct: 402 ----------TYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNV 451
Query: 434 TEA 436
E
Sbjct: 452 KEG 454
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 13 RNRVPPPDV----MIRGFAAAWTETEKTNW-------KGLADETTYNKLVLACCRDGRVE 61
+N + P +V MIR E N + D + K++ A C D +V+
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD 348
Query: 62 EALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIV 117
EA G+ R M ++ D ++LIH C +G+ +A K+F E + G PS+ TYN ++
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLI 407
Query: 118 LAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLA 177
C EA + + ER +PN ++N L++G G ++E +L+EM + G
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF 467
Query: 178 LDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKG 210
+ T+ L GK E A ++ + V G
Sbjct: 468 PNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 5/181 (2%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKV 97
+E TY ++ A C++ + EA + M E D + +I C+ + D+A +
Sbjct: 294 PNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGL 353
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
+ +M+ P A + ++ C++ R EA + E+G P+L+++N L+ G C
Sbjct: 354 WRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFD-EFEKGSIPSLLTYNTLIAGMCE 412
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
KG++ EA L +M ++ + TY LI G V++ + EM+ G P+ T
Sbjct: 413 KGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTT 472
Query: 218 Y 218
+
Sbjct: 473 F 473
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 207/481 (43%), Gaps = 52/481 (10%)
Query: 55 CRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSV 110
C G+++ AL + + M S T+ L++ C G +KA + EM + G SP+
Sbjct: 132 CLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNC 191
Query: 111 ATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM-EEAEELLQ 169
+YN ++ C +AL + + + G PN ++ N +V C KG + ++LL+
Sbjct: 192 VSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLE 251
Query: 170 EM---NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLC 226
E+ +Q LD T L+ G V +A E+ EM K + D+ Y +I LC
Sbjct: 252 EILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLC 311
Query: 227 LQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFV 286
+ A+ +M++RG++PD TY L+SA + +F +A L M + G PD
Sbjct: 312 SSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPD-- 369
Query: 287 TGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGK 346
++Y II GLC+ A E L M + L P+ + ++ VI G+ R +
Sbjct: 370 ------QISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 347 AYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLER 406
A + ++ + +G+ ++ T + L+ Y+ G L A+ ++
Sbjct: 424 ALSV--------LNLMLSYGVKPNV-----------YTNNALIHGYVKGGRLIDAWWVKN 464
Query: 407 EINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSN 466
E+ P Y++ L A T + H LR+ F +YD ++
Sbjct: 465 EMRSTKIHPDTTTYNLLLG-----AACT---------LGH--LRL-AFQLYDEMLRRGCQ 507
Query: 467 NEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDM 526
+ + LV+G +G +KKA R+ D + +L + R +AY +
Sbjct: 508 PDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLV 567
Query: 527 Y 527
Y
Sbjct: 568 Y 568
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 129/302 (42%), Gaps = 47/302 (15%)
Query: 50 LVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTG 105
L+ +C ++G V +AL + + M++ +D Y +I C G AY +M+ G
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 106 FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
+P V TYN ++ A C++ +F EA + + G P+ IS+ ++QG C G + A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 166 E-----------------------------------LLQEMNQKGLALDDKTYTSLIHLF 190
E +L M G+ + T +LIH +
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 191 CNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDN 250
G++ A+ +K EM I PD TY L+G+ C L AF L+ EMLRRG PD
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI 510
Query: 251 KTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAE 310
TYT L+ + + KA L + TGI+ HV + + L R
Sbjct: 511 ITYTELVRGLCWKGRLKKAESLLSRI--------QATGITIDHVPFLILAKKYTRLQRPG 562
Query: 311 EA 312
EA
Sbjct: 563 EA 564
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 137/349 (39%), Gaps = 51/349 (14%)
Query: 43 DETTYNKLVLACCRDGRV--------EEALGILRGMAESDENTYTSLIHLFCDQGQCDKA 94
+ T N +V A C+ G + EE L + A D T L+ G +A
Sbjct: 225 NRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQA 284
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
+V+ EM YN I+ C A G + +++RG P++ ++N L+
Sbjct: 285 LEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISA 344
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE--------- 205
C +GK +EA +L M G+A D +Y +I C G V +A E
Sbjct: 345 LCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPE 404
Query: 206 --------------------------MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQ 239
M+ G+ P+ T LI L +A+ +
Sbjct: 405 VLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKN 464
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
EM + PD TY L+ A AF L DEM+ +G PD +TY +
Sbjct: 465 EMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI--------ITYTEL 516
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
+ GLC R ++A +L + G++ D V + + + R++ G+AY
Sbjct: 517 VRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 188/457 (41%), Gaps = 50/457 (10%)
Query: 106 FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
+ ++ +++I+ C + AL + + +I G P LI+ N L+ G C G +E+A+
Sbjct: 117 YDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKAD 176
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSL 225
L++EM + G + + +Y +LI C+ V+KA + M GI P+ T ++ +L
Sbjct: 177 GLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHAL 236
Query: 226 CLQQTL-SEAFDLFQEML--RRGLSP-DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
C + + + L +E+L + +P D T LM + +A + EM K
Sbjct: 237 CQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNV 296
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
D V YN II GLC A + M + G++PD +Y+T+I C+
Sbjct: 297 PAD--------SVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKE 348
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDID-KSVMQGLSHEDTFSNLMSDYLAEGHLEK 400
+ +A L M ++ D I K ++QGL G + +
Sbjct: 349 GKFDEACDLHGTMQNGGVA-------PDQISYKVIIQGLC-------------IHGDVNR 388
Query: 401 AYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTL 460
A + LP + ++V ++ + + A L +S+ P + L
Sbjct: 389 ANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV--KPNVYTNNAL 446
Query: 461 IENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNV 520
I G VKG G + A + M PD YNLL+ C G++
Sbjct: 447 IH-----------GYVKG----GRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHL 491
Query: 521 HKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNK 557
A+ +Y EM+ G P + + L+ LC R K
Sbjct: 492 RLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKK 528
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 151/358 (42%), Gaps = 55/358 (15%)
Query: 253 YTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEA 312
++ +M LQ + A L+ +MI+ G +P +T +N +++GLC E+A
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLIT--------HNHLLNGLCKAGYIEKA 175
Query: 313 LEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS-----------W 361
++R M E+G SP+ VSY+T+I G C + + KA L M+K I
Sbjct: 176 DGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHA 235
Query: 362 LGLWGLYDDIDKSVMQGLSHEDTFSN---------LMSDYLAEGHLEKAYLLEREINYFD 412
L G+ + +K +++ + + LM G++ +A + +E++ +
Sbjct: 236 LCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKN 295
Query: 413 YLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR--MPTFIIYDTLIEN-CSNNEF 469
V Y+V + L + A F+ + R P Y+TLI C +F
Sbjct: 296 VPADSVVYNVIIRGLCSSGNMVAAYG----FMCDMVKRGVNPDVFTYNTLISALCKEGKF 351
Query: 470 KSVVGL-------------------VKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLL 510
L ++G + G + +A ML+ + P+ ++N++
Sbjct: 352 DEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVV 411
Query: 511 IFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRS 568
I + R G+ A + M+ YG P++++ ALI R +W ++N +RS
Sbjct: 412 IDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLID-AWWVKNEMRS 468
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 42/247 (17%)
Query: 43 DETTYNKLVLACCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQGQCDKA---- 94
D TYN L+ A C++G+ +EA + G D+ +Y +I C G ++A
Sbjct: 334 DVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFL 393
Query: 95 -------------------------------YKVFAEMIDTGFSPSVATYNAIVLAYCRD 123
V M+ G P+V T NA++ Y +
Sbjct: 394 LSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKG 453
Query: 124 KRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTY 183
R +A + + P+ ++N L+ C G + A +L EM ++G D TY
Sbjct: 454 GRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITY 513
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML- 242
T L+ C KG+++KA + + + GI D + L Q EA+ ++++ L
Sbjct: 514 TELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLA 573
Query: 243 --RRGLS 247
RG+S
Sbjct: 574 TRNRGVS 580
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 226/532 (42%), Gaps = 56/532 (10%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D T++ ++ C+ G+V E +LR M E + TYT+L+ A ++
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 317
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
++M+ G + Y ++ + REA + L+E PN++++ ALV G C
Sbjct: 318 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 377
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G + AE ++ +M +K + + TY+S+I+ + KG +E+A + +M + ++P+ TY
Sbjct: 378 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 437
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
G +I L A +L +EM G+ +N L++ + + + L +M+
Sbjct: 438 GTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVS 497
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
K G++ + Y ++I E AL M E G+ D VSY+ +I G
Sbjct: 498 K--------GVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGM 549
Query: 339 CRIRELGKAYKLK------VEMDKKSISWL-----------GLWGLYDDIDKSVMQGLSH 381
+ ++G + K +E D + + + G+ L+D + G+
Sbjct: 550 LKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC---GIKP 606
Query: 382 EDTFSNLMSDYLAE-GHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKAR---ITEAK 437
N++ L E G +E+A + ++ + P Y +FL+ +K R I +
Sbjct: 607 SLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH 666
Query: 438 HHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLE 497
LL + + + +Y+TLI G+ KKAA M
Sbjct: 667 ETLLSYGIKLSRQ-----VYNTLIATLCK---------------LGMTKKAAMVMGDMEA 706
Query: 498 GNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+ PD +N L+ + +V KA Y M+ G +P++ + +I L
Sbjct: 707 RGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL 758
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 42/414 (10%)
Query: 24 RGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGM-----AESDENTY 78
R + AA T + + + D +N L+ +G V + + ++ D
Sbjct: 73 RLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFAL 132
Query: 79 TSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
LIH FC G+ A + + S TYN ++ C EA L +++
Sbjct: 133 NVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVK 189
Query: 139 RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK 198
G P+ +S+N L+ GFC G A+ L+ E+++ L T+T L+ + N +E+
Sbjct: 190 MGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI----THTILLSSYYNLHAIEE 245
Query: 199 AFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
A+ +MV G PD T+ +I LC + E L +EM + P++ TYT L+
Sbjct: 246 AYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 302
Query: 259 AYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRG 318
+ + A L +M+ V GI V Y ++ GL EA + +
Sbjct: 303 SLFKANIYRHALALYSQMV--------VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 354
Query: 319 MPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQG 378
+ E P+ V+Y+ ++ G C+ +L A + +M +KS+
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSV------------------- 395
Query: 379 LSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKAR 432
+ + T+S++++ Y+ +G LE+A L R++ + +P Y ++ L K +
Sbjct: 396 IPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK 449
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 13/220 (5%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
Y +LI C G KA V +M GF P T+N+++ Y R+AL +
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 739
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+E G PN+ ++N +++G G ++E ++ L EM +G+ DD TY +LI G +
Sbjct: 740 MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+ + + EM+ G++P TY LI + +A +L +EM +RG+SP+ TY +
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTM 859
Query: 257 MSA-----------YRLQAQF-SKAFHLQDEMI-HKGFLP 283
+S + +A + ++A L EM+ KG++P
Sbjct: 860 ISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 899
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 143/338 (42%), Gaps = 48/338 (14%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
D +YN L+ + G+V A +GM E D T+ +++ QG + K++
Sbjct: 538 DVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 596
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISF---------- 148
+M G PS+ + N +V C + + EA+ IL ++ PNL ++
Sbjct: 597 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKH 656
Query: 149 -------------------------NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTY 183
N L+ C G ++A ++ +M +G D T+
Sbjct: 657 KRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTF 716
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
SL+H + V KA + M+ GI P+ TY +I L + E EM
Sbjct: 717 NSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKS 776
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGL 303
RG+ PD+ TY L+S + + EMI G +P TS TYN +I
Sbjct: 777 RGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP------KTS--TYNVLISEF 828
Query: 304 CLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
+ + +A E+L+ M + G+SP+ +Y T+I G C++
Sbjct: 829 ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 189/430 (43%), Gaps = 54/430 (12%)
Query: 139 RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD-----DKTYTSLIH----L 189
R F N SF+++ + ++ E+EE + Q+ D + Y SL H L
Sbjct: 13 RFFLSNCRSFSSI-----KRPQIPESEETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRL 67
Query: 190 FCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDL-FQEMLRRGLSP 248
+ + ++ A + M G++PD+ + LI + + + L + +M+ G+SP
Sbjct: 68 YLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSP 127
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDR 308
D L+ ++ + S A L + IS VTYN +I GLC
Sbjct: 128 DVFALNVLIHSFCKVGRLSFAISLLRNRV-----------ISIDTVTYNTVISGLCEHGL 176
Query: 309 AEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI--------S 360
A+EA + L M ++G+ PD VSY+T+I GFC++ +A L E+ + ++ S
Sbjct: 177 ADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSS 236
Query: 361 WLGLWGLYDDIDKSVMQGLSHE-DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVH 419
+ L + + VM G + TFS++++ G + + LL RE+ P V
Sbjct: 237 YYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 296
Query: 420 YSVFLNVLNKKARITEAKHHLLWFISHVCLRMPT-FIIYDTLIENCSNNEFKSVVGLVKG 478
Y+ ++ L KA I +H L + V +P ++Y L++ GL K
Sbjct: 297 YTTLVDSLF-KANI--YRHALALYSQMVVRGIPVDLVVYTVLMD-----------GLFKA 342
Query: 479 FGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPH 538
G +++A + +LE N P+ Y L+ C+ G++ A + +M+ P+
Sbjct: 343 ----GDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Query: 539 MFSVLALIEA 548
+ + ++I
Sbjct: 399 VVTYSSMING 408
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 217/495 (43%), Gaps = 61/495 (12%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
+ T L+++ ++G+ +A VF + +TG PS+ +Y ++ A K++ I+ +
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+ G + + I FNA++ F G ME+A + L +M + GL TY +LI + GK
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 197 EKAFEMKAEMVHKG---ILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
E++ E+ M+ +G + P+ T+ L+ + C ++ + EA+++ ++M G+ PD TY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
+ + Y Q + + E++ K + + + T ++ G C R + L
Sbjct: 227 NTIATCY---VQKGETVRAESEVVEKMVMKE---KAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDK 373
+R M E+ + + V ++++I GF + MD+ I + L L ++
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEV------------MDRDGIDEVTLTLLLMSFNE 328
Query: 374 SV---------MQGLS-------HED--TFSNLMSDYLAEGHLEKAYLLEREINYFDYLP 415
V +Q L+ D T+S +M+ + + G++EKA + +E+ P
Sbjct: 329 EVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 388
Query: 416 VDVH-YSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVV 473
D H YS+ + +A+ L I P +I+ T+I CSN
Sbjct: 389 -DAHAYSILAKGYVRAKEPKKAEELLETLIVE---SRPNVVIFTTVISGWCSN------- 437
Query: 474 GLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHY 533
G M A R ++M + P+ + L++ + KA ++ M
Sbjct: 438 ---------GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGC 488
Query: 534 GFAPHMFSVLALIEA 548
G P + L L EA
Sbjct: 489 GVKPENSTFLLLAEA 503
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 148/312 (47%), Gaps = 33/312 (10%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAE- 100
T+N LV A C+ +VEEA +++ M E D TY ++ + +G+ +A E
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 101 -MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
++ P+ T +V YCR+ R R+ L +R + E E NL+ FN+L+ GF
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF---- 305
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE----MVHKGILPDA 215
++ M++ G+ D+ T T L+ F + ++ +MK + M + D
Sbjct: 306 --------VEVMDRDGI--DEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADV 355
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
TY ++ + + +A +F+EM++ G+ PD Y+ L Y + KA L +
Sbjct: 356 ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET 415
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
+I + P+ V + +I G C ++A+ + M + G+SP+ ++ T++
Sbjct: 416 LIVES-RPNVVI--------FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 466
Query: 336 FGFCRIRELGKA 347
+G+ +++ KA
Sbjct: 467 WGYLEVKQPWKA 478
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
++D TY+++++ + G +KA +VF EM+ G P Y+ + Y R K ++A
Sbjct: 352 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 411
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+L LI PN++ F ++ G+C G M++A + +M + G++ + KT+ +L+ +
Sbjct: 412 LLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYL 470
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTY 218
+ KA E+ M G+ P+ T+
Sbjct: 471 EVKQPWKAEEVLQMMRGCGVKPENSTF 497
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 110/238 (46%), Gaps = 32/238 (13%)
Query: 55 CRDGRVEEALGILRGMAES-------------------------DENTYTSLIHLFCDQ- 88
CR+GRV + L +R M E DE T T L+ F ++
Sbjct: 271 CREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEV 330
Query: 89 ---GQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNL 145
G +V M + V TY+ ++ A+ +A + + +++ G +P+
Sbjct: 331 ELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA 390
Query: 146 ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE 205
+++ L +G+ + ++AEELL+ + + + +T++I +C+ G ++ A + +
Sbjct: 391 HAYSILAKGYVRAKEPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNK 449
Query: 206 MVHKGILPDADTYGPLI-GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRL 262
M G+ P+ T+ L+ G L ++Q +A ++ Q M G+ P+N T+ L A+R+
Sbjct: 450 MCKFGVSPNIKTFETLMWGYLEVKQPW-KAEEVLQMMRGCGVKPENSTFLLLAEAWRV 506
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 8/256 (3%)
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
L +G KA+++F G P+ +YN ++ A+C + A + ++ER P
Sbjct: 164 LVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP 223
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
++ S+ L+QGFC KG++ A ELL +M KG D +YT+L++ C K ++ +A+++
Sbjct: 224 DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQ 263
M KG PD Y +I C + +A + +ML G SP++ +Y L+ Q
Sbjct: 284 CRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQ 343
Query: 264 AQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIG 323
F + +EMI KGF P F N ++ G C + EEA +++ + + G
Sbjct: 344 GMFDEGKKYLEEMISKGFSPHFSVS--------NCLVKGFCSFGKVEEACDVVEVVMKNG 395
Query: 324 LSPDAVSYSTVIFGFC 339
+ + ++ VI C
Sbjct: 396 ETLHSDTWEMVIPLIC 411
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 126/265 (47%), Gaps = 9/265 (3%)
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
V A+ +G+ + + ++ Y K + L ++E F P N ++
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 157 G-KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
+G +++A EL + G+ + ++Y L+ FC + A+++ +M+ + ++PD
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
D+Y LI C + ++ A +L +ML +G PD +YT L+++ + Q +A+ L
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCR 285
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
M KG PD V YN +I G C DRA +A ++L M G SP++VSY T+I
Sbjct: 286 MKLKGCNPDLVH--------YNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 336 FGFCRIRELGKAYKLKVEMDKKSIS 360
G C + K EM K S
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKGFS 362
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 9/271 (3%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRF-REALGILRCL 136
+T LI ++ + +K F +M++ F+P N I+ + + ++A + +
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
G PN S+N L+Q FC + A +L +M ++ + D +Y LI FC KG+V
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
A E+ +M++KG +PD +Y L+ SLC + L EA+ L M +G +PD Y +
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
+ + + + A + D+M+ G P+ V+Y +I GLC +E + L
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNGCSPN--------SVSYRTLIGGLCDQGMFDEGKKYL 353
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKA 347
M G SP + ++ GFC ++ +A
Sbjct: 354 EEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 5/204 (2%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYK 96
+ D +Y L+ CR G+V A+ +L M D +YT+L++ C + Q +AYK
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYK 281
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+ M G +P + YN ++L +CR+ R +A +L ++ G PN +S+ L+ G C
Sbjct: 282 LLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLC 341
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+G +E ++ L+EM KG + L+ FC+ GKVE+A ++ ++ G +D
Sbjct: 342 DQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSD 401
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQE 240
T+ +I +C + SE LF E
Sbjct: 402 TWEMVIPLIC-NEDESEKIKLFLE 424
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 15/259 (5%)
Query: 2 KLLRVLFKTFLRNRVPPP-------DVMI--RGFAAAWTETEKTN-WKGLADET-TYNKL 50
K+L +K N P P DV++ RG+ E K++ G+ T +YN L
Sbjct: 137 KVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLL 196
Query: 51 VLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGF 106
+ A C + + A + M E D ++Y LI FC +GQ + A ++ +M++ GF
Sbjct: 197 MQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGF 256
Query: 107 SPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEE 166
P +Y ++ + CR + REA +L + +G P+L+ +N ++ GFC + + +A +
Sbjct: 257 VPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARK 316
Query: 167 LLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLC 226
+L +M G + + +Y +LI C++G ++ + EM+ KG P L+ C
Sbjct: 317 VLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFC 376
Query: 227 LQQTLSEAFDLFQEMLRRG 245
+ EA D+ + +++ G
Sbjct: 377 SFGKVEEACDVVEVVMKNG 395
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 90/175 (51%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
+ +Y L+ FC AY++F +M++ P V +Y ++ +CR + A+ +L
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
++ +GF P+ +S+ L+ C K ++ EA +LL M KG D Y ++I FC +
Sbjct: 249 DDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRE 308
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
+ A ++ +M+ G P++ +Y LIG LC Q E +EM+ +G SP
Sbjct: 309 DRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 363
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKV 97
D YN ++L CR+ R +A +L M + +Y +LI CDQG D+ K
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
EMI GFSP + N +V +C + EA ++ +++ G + ++ ++ C
Sbjct: 353 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 412
Query: 158 KGKMEEAEELLQEMNQKGLALDDK 181
+ + E+ + L++ ++ + D +
Sbjct: 413 EDESEKIKLFLEDAVKEEITGDTR 436
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 126/370 (34%), Gaps = 96/370 (25%)
Query: 238 FQEMLRRGLSPDNKTYTGLMSA-YRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTY 296
F +ML +P K ++ + KAF L F + G+ + +Y
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL--------FKSSRLHGVMPNTRSY 193
Query: 297 NAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDK 356
N ++ CL D A ++ M E + PD SY +I GFCR ++ A +
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAME------- 246
Query: 357 KSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPV 416
L+ D L +G ++P
Sbjct: 247 -------------------------------LLDDMLNKG----------------FVPD 259
Query: 417 DVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLV 476
+ Y+ LN L +K ++ EA L C P + Y+T+I
Sbjct: 260 RLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC--NPDLVHYNTMI--------------- 302
Query: 477 KGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFA 536
GF A + D ML P+ Y LI C G + EM+ GF+
Sbjct: 303 LGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFS 362
Query: 537 PHMFSVLALIEALCCVRRYNKMSWVIQNTLRS----------------CNLNDSELLQVL 580
PH L++ C + + V++ +++ CN ++SE +++
Sbjct: 363 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLF 422
Query: 581 NEIDVREGQT 590
E V+E T
Sbjct: 423 LEDAVKEEIT 432
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 8/264 (3%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TYT L++ +C +A +++ +MID G P + +N ++ R ++ +A+ + +
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+G PN+ S+ +++ FC + ME A E +M GL D YT LI F + K+
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+ +E+ EM KG PD TY LI + Q+ A ++ +M++ + P T+ +
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMI 479
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
M +Y + + + +EMI KG PD +Y +I GL ++ EA L
Sbjct: 480 MKSYFMARNYEMGRAVWEEMIKKGICPD--------DNSYTVLIRGLIGEGKSREACRYL 531
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCR 340
M + G+ + Y+ F R
Sbjct: 532 EEMLDKGMKTPLIDYNKFAADFHR 555
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 11/318 (3%)
Query: 24 RGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIH 83
R F + E+ KGL T+ + A ++A+GI M + I+
Sbjct: 209 RQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETIN 268
Query: 84 LFCD---QGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
D + + K +V + + F+P++ TY ++ +CR + EA I +I++G
Sbjct: 269 CLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQG 328
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
+P++++ N +++G K +A +L M KG + ++YT +I FC + +E A
Sbjct: 329 LKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 388
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
E +MV G+ PDA Y LI Q+ L ++L +EM +G PD KTY L+
Sbjct: 389 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLM 448
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
Q A + ++MI P S T+N I+ + E + M
Sbjct: 449 ANQKMPEHATRIYNKMIQNEIEP--------SIHTFNMIMKSYFMARNYEMGRAVWEEMI 500
Query: 321 EIGLSPDAVSYSTVIFGF 338
+ G+ PD SY+ +I G
Sbjct: 501 KKGICPDDNSYTVLIRGL 518
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
+Y ++ C+ +E A+ M +S D YT LI F Q + D Y++ EM
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ G P TYNA++ K A I +I+ EP++ +FN +++ +
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNY 489
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
E + +EM +KG+ DD +YT LI +GK +A EM+ KG+
Sbjct: 490 EMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 18/257 (7%)
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
GF+ TYN+++ + ++F + +L + +G + +F ++ F + ++A
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKA 248
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
+ + M + + +T L+ + K+ K ++ + + + P+ TY L+
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPD----NKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
C + L EA ++ +M+ +GL PD N GL+ + R ++ K FH+ M KG
Sbjct: 308 WCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRS-RKKSDAIKLFHV---MKSKG 363
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
P+ + Y +I C E A+E M + GL PDA Y+ +I GF
Sbjct: 364 PCPNVRS--------YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 341 IRELGKAYKLKVEMDKK 357
++L Y+L EM +K
Sbjct: 416 QKKLDTVYELLKEMQEK 432
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 16/224 (7%)
Query: 12 LRNRVPPPDV-----MIRGFAAAWTETEKTNW------KGL-ADETTYNKLVLACCRDGR 59
++++ P P+V MIR F + + GL D Y L+ +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 60 VEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNA 115
++ +L+ M E D TY +LI L +Q + A +++ +MI PS+ T+N
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNM 478
Query: 116 IVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKG 175
I+ +Y + + + +I++G P+ S+ L++G G+GK EA L+EM KG
Sbjct: 479 IMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKG 538
Query: 176 LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ Y F G+ E E+ G A+ +
Sbjct: 539 MKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFA 582
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/383 (18%), Positives = 148/383 (38%), Gaps = 58/383 (15%)
Query: 173 QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLS 232
++G A D +TY S++ + + E + EM KG+L +T+ + + +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERK 246
Query: 233 EAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTS 292
+A +F+ M + +T L+ + +A+ K + + + + F P+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLG-RAKLGKEAQVLFDKLKERFTPNM------- 298
Query: 293 HVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKV 352
+TY +++G C + EA I M + GL PD V+++ ++ G R R+ A KL
Sbjct: 299 -MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFH 357
Query: 353 EMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFD 412
M K + +++ ++ D+ + +E A I YFD
Sbjct: 358 VMKSKG-------------------PCPNVRSYTIMIRDFCKQSSMETA------IEYFD 392
Query: 413 YL------PVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSN 466
+ P Y+ + + ++ + + + E
Sbjct: 393 DMVDSGLQPDAAVYTCLITGFGTQKKLD-----------------TVYELLKEMQEKGHP 435
Query: 467 NEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDM 526
+ K+ L+K + + + A R +++M++ +P +N+++ + N +
Sbjct: 436 PDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAV 495
Query: 527 YMEMVHYGFAPHMFSVLALIEAL 549
+ EM+ G P S LI L
Sbjct: 496 WEEMIKKGICPDDNSYTVLIRGL 518
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 119/220 (54%), Gaps = 4/220 (1%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY L+ + G ++ A+ + + M D TY+ +I+ G A+K+F
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM+D G +P++ TYN ++ + + + ++ AL + R + GFEP+ ++++ +++
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G +EEAE + EM QK D+ Y L+ L+ G VEKA++ M+H G+ P+ T
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC 612
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
L+ + ++EA++L Q ML GL P +TYT L+S
Sbjct: 613 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 8/281 (2%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D +TYT+++ Q K+ EM+ G P+ TYN ++ +Y R EA+ +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ E G +P+ +++ L+ G ++ A ++ Q M GL+ D TY+ +I+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
G + A ++ EMV +G P+ TY ++ + A L+++M G PD TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
+ +M +A + EM K ++PD Y ++ E+A
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD--------EPVYGLLVDLWGKAGNVEKAW 594
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
+ + M GL P+ + ++++ F R+ ++ +AY+L M
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 140/322 (43%), Gaps = 35/322 (10%)
Query: 126 FREALGILRCLIER-GFEPNLISFNALVQGFCGKGKMEEA-EELLQEMNQKGLALDDKTY 183
+ ALG L + GF+ + ++ +V G G+ K A +LL EM + G + TY
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMV-GNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
LIH + + +A + +M G PD TY LI L A D++Q M
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGL 303
GLSPD TY+ +++ A L EM+ +G P+ VT YN ++
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVT--------YNIMMDLH 514
Query: 304 CLLDRAEEALEILRGMPEIGLSPDAVSYSTV--IFGFCRIRELGKAYKLKVEMDKKSISW 361
+ AL++ R M G PD V+YS V + G C E +A + EM +K +W
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE--EAEAVFTEMQQK--NW 570
Query: 362 LG----------LWGLYDDIDKSVM--QGLSHE------DTFSNLMSDYLAEGHLEKAYL 403
+ LWG +++K+ Q + H T ++L+S +L + +AY
Sbjct: 571 IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYE 630
Query: 404 LEREINYFDYLPVDVHYSVFLN 425
L + + P Y++ L+
Sbjct: 631 LLQNMLALGLRPSLQTYTLLLS 652
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 160/398 (40%), Gaps = 54/398 (13%)
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEM--KAEMVHKGILPDADTYGPLIGSLCLQQT-- 230
G AL + Y + H+ N V + F AE + + D Y + L+Q
Sbjct: 287 GTALTSRQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQ---ANQVLKQMND 343
Query: 231 LSEAFDLFQEMLRR-GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGI 289
A F + R+ G D TYT ++ QF L DEM+ G P+ VT
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT-- 401
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
YN +IH + EA+ + M E G PD V+Y T+I KA
Sbjct: 402 ------YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLI------DIHAKAGF 449
Query: 350 LKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED-TFSNLMSDYLAEGHLEKAYLLEREI 408
L + MD +Y + GLS + T+S +++ GHL A+ L E+
Sbjct: 450 LDIAMD-----------MYQRMQAG---GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 409 NYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNE 468
P V Y++ ++ L+ KAR + L + + P + Y ++E
Sbjct: 496 VDQGCTPNLVTYNIMMD-LHAKARNYQNALKLYRDMQNAGFE-PDKVTYSIVMEV----- 548
Query: 469 FKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYM 528
G G +++A M + N+ PD VY LL+ + GNV KA+ Y
Sbjct: 549 ----------LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 529 EMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTL 566
M+H G P++ + +L+ V + + ++QN L
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 119/220 (54%), Gaps = 4/220 (1%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY L+ + G ++ A+ + + M D TY+ +I+ G A+K+F
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM+D G +P++ TYN ++ + + + ++ AL + R + GFEP+ ++++ +++
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G +EEAE + EM QK D+ Y L+ L+ G VEKA++ M+H G+ P+ T
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC 612
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
L+ + ++EA++L Q ML GL P +TYT L+S
Sbjct: 613 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 8/281 (2%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D +TYT+++ Q K+ EM+ G P+ TYN ++ +Y R EA+ +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ E G +P+ +++ L+ G ++ A ++ Q M GL+ D TY+ +I+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
G + A ++ EMV +G P+ TY ++ + A L+++M G PD TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
+ +M +A + EM K ++PD Y ++ E+A
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD--------EPVYGLLVDLWGKAGNVEKAW 594
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
+ + M GL P+ + ++++ F R+ ++ +AY+L M
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 140/322 (43%), Gaps = 35/322 (10%)
Query: 126 FREALGILRCLIER-GFEPNLISFNALVQGFCGKGKMEEA-EELLQEMNQKGLALDDKTY 183
+ ALG L + GF+ + ++ +V G G+ K A +LL EM + G + TY
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMV-GNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
LIH + + +A + +M G PD TY LI L A D++Q M
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGL 303
GLSPD TY+ +++ A L EM+ +G P+ VT YN ++
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVT--------YNIMMDLH 514
Query: 304 CLLDRAEEALEILRGMPEIGLSPDAVSYSTV--IFGFCRIRELGKAYKLKVEMDKKSISW 361
+ AL++ R M G PD V+YS V + G C E +A + EM +K +W
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE--EAEAVFTEMQQK--NW 570
Query: 362 LG----------LWGLYDDIDKSVM--QGLSHE------DTFSNLMSDYLAEGHLEKAYL 403
+ LWG +++K+ Q + H T ++L+S +L + +AY
Sbjct: 571 IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYE 630
Query: 404 LEREINYFDYLPVDVHYSVFLN 425
L + + P Y++ L+
Sbjct: 631 LLQNMLALGLRPSLQTYTLLLS 652
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 160/398 (40%), Gaps = 54/398 (13%)
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEM--KAEMVHKGILPDADTYGPLIGSLCLQQT-- 230
G AL + Y + H+ N V + F AE + + D Y + L+Q
Sbjct: 287 GTALTSRQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQ---ANQVLKQMND 343
Query: 231 LSEAFDLFQEMLRR-GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGI 289
A F + R+ G D TYT ++ QF L DEM+ G P+ VT
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT-- 401
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
YN +IH + EA+ + M E G PD V+Y T+I KA
Sbjct: 402 ------YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLI------DIHAKAGF 449
Query: 350 LKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED-TFSNLMSDYLAEGHLEKAYLLEREI 408
L + MD +Y + GLS + T+S +++ GHL A+ L E+
Sbjct: 450 LDIAMD-----------MYQRMQAG---GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 409 NYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNE 468
P V Y++ ++ L+ KAR + L + + P + Y ++E
Sbjct: 496 VDQGCTPNLVTYNIMMD-LHAKARNYQNALKLYRDMQNAGFE-PDKVTYSIVMEV----- 548
Query: 469 FKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYM 528
G G +++A M + N+ PD VY LL+ + GNV KA+ Y
Sbjct: 549 ----------LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 529 EMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTL 566
M+H G P++ + +L+ V + + ++QN L
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 119/220 (54%), Gaps = 4/220 (1%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TY L+ + G ++ A+ + + M D TY+ +I+ G A+K+F
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM+D G +P++ TYN ++ + + + ++ AL + R + GFEP+ ++++ +++
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G +EEAE + EM QK D+ Y L+ L+ G VEKA++ M+H G+ P+ T
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC 612
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
L+ + ++EA++L Q ML GL P +TYT L+S
Sbjct: 613 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 8/281 (2%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D +TYT+++ Q K+ EM+ G P+ TYN ++ +Y R EA+ +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ E G +P+ +++ L+ G ++ A ++ Q M GL+ D TY+ +I+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
G + A ++ EMV +G P+ TY ++ + A L+++M G PD TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
+ +M +A + EM K ++PD Y ++ E+A
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD--------EPVYGLLVDLWGKAGNVEKAW 594
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
+ + M GL P+ + ++++ F R+ ++ +AY+L M
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 140/322 (43%), Gaps = 35/322 (10%)
Query: 126 FREALGILRCLIER-GFEPNLISFNALVQGFCGKGKMEEA-EELLQEMNQKGLALDDKTY 183
+ ALG L + GF+ + ++ +V G G+ K A +LL EM + G + TY
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMV-GNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
LIH + + +A + +M G PD TY LI L A D++Q M
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGL 303
GLSPD TY+ +++ A L EM+ +G P+ VT YN ++
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVT--------YNIMMDLH 514
Query: 304 CLLDRAEEALEILRGMPEIGLSPDAVSYSTV--IFGFCRIRELGKAYKLKVEMDKKSISW 361
+ AL++ R M G PD V+YS V + G C E +A + EM +K +W
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE--EAEAVFTEMQQK--NW 570
Query: 362 LG----------LWGLYDDIDKSVM--QGLSHE------DTFSNLMSDYLAEGHLEKAYL 403
+ LWG +++K+ Q + H T ++L+S +L + +AY
Sbjct: 571 IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYE 630
Query: 404 LEREINYFDYLPVDVHYSVFLN 425
L + + P Y++ L+
Sbjct: 631 LLQNMLALGLRPSLQTYTLLLS 652
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 160/398 (40%), Gaps = 54/398 (13%)
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEM--KAEMVHKGILPDADTYGPLIGSLCLQQT-- 230
G AL + Y + H+ N V + F AE + + D Y + L+Q
Sbjct: 287 GTALTSRQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQ---ANQVLKQMND 343
Query: 231 LSEAFDLFQEMLRR-GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGI 289
A F + R+ G D TYT ++ QF L DEM+ G P+ VT
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT-- 401
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
YN +IH + EA+ + M E G PD V+Y T+I KA
Sbjct: 402 ------YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLI------DIHAKAGF 449
Query: 350 LKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED-TFSNLMSDYLAEGHLEKAYLLEREI 408
L + MD +Y + GLS + T+S +++ GHL A+ L E+
Sbjct: 450 LDIAMD-----------MYQRMQAG---GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 409 NYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNE 468
P V Y++ ++ L+ KAR + L + + P + Y ++E
Sbjct: 496 VDQGCTPNLVTYNIMMD-LHAKARNYQNALKLYRDMQNAGFE-PDKVTYSIVMEV----- 548
Query: 469 FKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYM 528
G G +++A M + N+ PD VY LL+ + GNV KA+ Y
Sbjct: 549 ----------LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 529 EMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTL 566
M+H G P++ + +L+ V + + ++QN L
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 194/461 (42%), Gaps = 42/461 (9%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D YN R+G A + M E + LI + D + + Y V+
Sbjct: 157 DFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVY 216
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+M GF P V YN I+ A ++ F AL + E G +F LV+G C
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKA 276
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G++EE E+LQ M + D YT++I ++G ++ + + EM I PD Y
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
G L+ LC + ++LF EM + + D + Y L+ + + A +L ++++
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVD 396
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
G++ D GI YNA+I GLC +++ ++A ++ + E L PD + S ++ +
Sbjct: 397 SGYIADI--GI------YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAY 448
Query: 339 C-------------RIRELG--------KAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQ 377
RI ELG + +KL ++K+ L ++ + +
Sbjct: 449 VVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILK------TK 502
Query: 378 GLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAK 437
G ++ LM G ++K+ L E+ + P YS+ + +K + A
Sbjct: 503 GHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAAC 562
Query: 438 HHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLVK 477
I C+ P+ Y +L + C E +V+ LV+
Sbjct: 563 SFHEKIIEMSCV--PSIAAYLSLTKGLCQIGEIDAVMLLVR 601
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 103/506 (20%), Positives = 191/506 (37%), Gaps = 98/506 (19%)
Query: 105 GFSPSVATYNAIVLAYC--RDKRFREALGILRCLIER----------------------- 139
G+ A YNA AYC R+ FR A + + +
Sbjct: 153 GYKHDFAAYNA--FAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 140 ------------GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
GF+P + +N ++ G + A + ++ + GL + T+ L+
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 188 HLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
C G++E+ E+ M PD Y +I +L + L + ++ EM R +
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 248 PDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLD 307
PD Y L+ + + + L EM K L D Y +I G
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILID--------REIYRVLIEGFVADG 382
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL-KVEMDKKSISWLGLWG 366
+ A + + + G D Y+ VI G C + ++ KAYKL +V ++++
Sbjct: 383 KVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEE--------- 433
Query: 367 LYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEK-AYLLER--EINYFDYLPVDVHYSVF 423
L D +T S +M Y+ L + +LER E+ Y PV + + F
Sbjct: 434 LEPDF-----------ETLSPIMVAYVVMNRLSDFSNVLERIGELGY----PVSDYLTQF 478
Query: 424 LNVL---NKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFG 480
+L +K + ++L H + +Y+ L+E L K
Sbjct: 479 FKLLCADEEKNAMALDVFYILKTKGH-----GSVSVYNILME-----------ALYK--- 519
Query: 481 MRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMF 540
G ++K+ M + ++PD + Y++ I G+V A + +++ P +
Sbjct: 520 -MGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIA 578
Query: 541 SVLALIEALCCVRRYNKMSWVIQNTL 566
+ L+L + LC + + + +++ L
Sbjct: 579 AYLSLTKGLCQIGEIDAVMLLVRECL 604
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 39 KGLADETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKA 94
KG + YN L+ A + G ++++L + M E D ++Y+ I F ++G A
Sbjct: 502 KGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAA 561
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILR-CL--IERGFEPNLISFNAL 151
++I+ PS+A Y ++ C+ + ++R CL +E G P +
Sbjct: 562 CSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG--PMEFKYALT 619
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
V C E+ +++ EMNQ+G+ +++ Y ++I G ++ A E+ E+ + +
Sbjct: 620 VCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKV 679
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDL 237
+ +AD + + ++QT + DL
Sbjct: 680 MTEADMV--VYEEMLIEQTKKKTADL 703
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
Query: 66 ILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKR 125
IL+ + Y L+ G K+ +F EM GF P ++Y+ + +
Sbjct: 498 ILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGD 557
Query: 126 FREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM--NQKGLALDDKTY 183
+ A +IE P++ ++ +L +G C G+++ L++E N + ++ K
Sbjct: 558 VKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYA 617
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
++ H+ C EK ++ EM +G+ + Y +I + T+ A ++F E+ +
Sbjct: 618 LTVCHV-CKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKK 676
Query: 244 R 244
R
Sbjct: 677 R 677
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/531 (23%), Positives = 207/531 (38%), Gaps = 89/531 (16%)
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
VFA++ G PS YNA++ A + A + + G +P+ ++N L+ G C
Sbjct: 167 VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVC 226
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEM---------- 206
KG ++EA L+++M Q+G + TYT LI F G+V++A + M
Sbjct: 227 KKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 207 -----VHKGI---LPDADTYGPLIGSL----------------CLQQT--LSEAFDLFQE 240
VH GI LP + L+G + CL E ++
Sbjct: 287 TIRTFVH-GIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 241 MLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAII 300
+ RG PD+ T+ MS + + D + +G P F Y ++
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGF--------NGYLVLV 397
Query: 301 HGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
L R E L+ M GL SY+ VI C+ R + A EM + IS
Sbjct: 398 QALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGIS 457
Query: 361 WLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHY 420
+ TF+ +S Y G ++K + + ++ + P + +
Sbjct: 458 -------------------PNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITF 498
Query: 421 SVFLNVLNKKARITEA----KHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLV 476
S+ +N L + I +A K L W I P I Y+ LI +C +
Sbjct: 499 SLIINCLCRAKEIKDAFDCFKEMLEWGIE------PNEITYNILIRSCCST--------- 543
Query: 477 KGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFA 536
G ++ + +M E PD YN I C+ V KA ++ M+ G
Sbjct: 544 ------GDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLK 597
Query: 537 PHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLNEIDVRE 587
P F+ LI+AL R ++ + + R + DS +++ E+D+R+
Sbjct: 598 PDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLRK 648
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 111/211 (52%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
+Y ++I C + + A EM D G SP++ T+N + Y ++ G+L L
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+ GF+P++I+F+ ++ C ++++A + +EM + G+ ++ TY LI C+ G
Sbjct: 487 LVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT 546
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+++ ++ A+M G+ PD Y I S C + + +A +L + MLR GL PDN TY+ L
Sbjct: 547 DRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTL 606
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
+ A + S+A + + G +PD T
Sbjct: 607 IKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 12/298 (4%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYK 96
+ D +T+N + + + E I G + N Y L+ + + + +
Sbjct: 352 IPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDR 411
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+M G SV +YNA++ C+ +R A L + +RG PNL++FN + G+
Sbjct: 412 YLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYS 471
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+G +++ +L+++ G D T++ +I+ C +++ AF+ EM+ GI P+
Sbjct: 472 VRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEI 531
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
TY LI S C + LF +M GLSPD Y + ++ + KA L M
Sbjct: 532 TYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTM 591
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
+ G PD + TY+ +I L R EA E+ + G PD+ + V
Sbjct: 592 LRIGLKPD--------NFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 149/374 (39%), Gaps = 66/374 (17%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVF 98
D TYN L+ C+ G V+EA+ +++ M + TYT LI F G+ D+A K
Sbjct: 214 DRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQL 273
Query: 99 AEMIDTGFSPSVAT-----------------------------------YNAIVLAYCRD 123
M +P+ AT Y+A++ +
Sbjct: 274 EMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNN 333
Query: 124 KRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTY 183
+E LR + ERG+ P+ +FNA + + E + +G+ Y
Sbjct: 334 SMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGY 393
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
L+ N + + +M G+L +Y +I LC + + A EM
Sbjct: 394 LVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQD 453
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT---------------- 287
RG+SP+ T+ +S Y ++ K + ++++ GF PD +T
Sbjct: 454 RGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKD 513
Query: 288 -----------GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
GI + +TYN +I C + ++++ M E GLSPD +Y+ I
Sbjct: 514 AFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQ 573
Query: 337 GFCRIRELGKAYKL 350
FC++R++ KA +L
Sbjct: 574 SFCKMRKVKKAEEL 587
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 166/413 (40%), Gaps = 49/413 (11%)
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
KG + + ELL+E+ G + D+ LI + G + ++ A++ G+ P
Sbjct: 123 KGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRL 182
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
Y +I +L +L A+ FQ+M G PD TY L+ + +A L +M
Sbjct: 183 YNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQME 242
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
+G P+ TY +I G + R +EAL+ L M L+P+ + T + G
Sbjct: 243 QEGNRPNV--------FTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 338 FCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGH 397
R KA+++ V +K S +Q + ++ L ++ +A+
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKD---------------SNLQRVGYDAVLYCLSNNSMAK-- 337
Query: 398 LEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIY 457
E L R+I Y+P ++ ++ L K + E F+S P F Y
Sbjct: 338 -ETGQFL-RKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGV--KPGFNGY 393
Query: 458 DTLIENCSNNE-FKSVVGLVKGFGMRGLMK-------------KAARAHD------RMLE 497
L++ N + F +K G+ GL+ KA R + M +
Sbjct: 394 LVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQD 453
Query: 498 GNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
P+ +N + + G+V K + + +++ +GF P + + +I LC
Sbjct: 454 RGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLC 506
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 31/149 (20%)
Query: 34 EKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDK 93
E W +E TYN L+ +CC G D+
Sbjct: 520 EMLEWGIEPNEITYNILIRSCCSTG-------------------------------DTDR 548
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
+ K+FA+M + G SP + YNA + ++C+ ++ ++A +L+ ++ G +P+ +++ L++
Sbjct: 549 SVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIK 608
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKT 182
G+ EA E+ + + G D T
Sbjct: 609 ALSESGRESEAREMFSSIERHGCVPDSYT 637
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 157/616 (25%), Positives = 244/616 (39%), Gaps = 108/616 (17%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
T+ L+ + GR +A + M + TYT LI C +G D A K+F EM
Sbjct: 200 TFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+G P +NA++ +C+ R EA +LR + GF L +++L+ G +
Sbjct: 260 QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRY 319
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+A EL M +K + D YT LI GK+E A ++ + M KGI PD Y +
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I +LC + L E L EM PD T+T L+ + +A + E I K
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTE-IEK-- 436
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM---------------------- 319
+G S S T+NA+I GLC +EA +L M
Sbjct: 437 -----SGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDT 491
Query: 320 -----------------PEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWL 362
+ G SPD VSY+ +I GFCR ++ A KL ++ L
Sbjct: 492 MVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL--------LNVL 543
Query: 363 GLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSV 422
L GL D SV T++ L++ G E+A+ L + F + P Y
Sbjct: 544 QLKGLSPD---SV--------TYNTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRS 590
Query: 423 FLNVLNKKARITEAKHHLLWFISHV-CLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGM 481
+ +K ++ A + + ++ + CL T IE C FK
Sbjct: 591 LMTWSCRKRKVLVAFNLWMKYLKKISCLDDET----ANEIEQC----FKE---------- 632
Query: 482 RGLMKKAARAHDRMLEGNYKPDGAV---YNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPH 538
+ RA R++E + + D Y + + C+ G H+A ++ +
Sbjct: 633 ----GETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVT 688
Query: 539 MFSVLALIEALCCVRRYNKMSWVIQNTL--------RSCNLNDSELLQVLNEIDVREGQT 590
S + LI LC + + V TL R CN S LL+ ++++ T
Sbjct: 689 PPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLT 748
Query: 591 EYLRGELAERAMDGLL 606
R E A +D +L
Sbjct: 749 N--RMERAGYNVDSML 762
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 127/531 (23%), Positives = 211/531 (39%), Gaps = 81/531 (15%)
Query: 30 WTETEKTNWKGLA-DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHL 84
W E+ G++ D + L+ A + G E+A+ M E D TY ++ +
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171
Query: 85 FC-DQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
++ A+ V+ EM+ SP++ T+ ++ + R +A + + RG P
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
N +++ L+ G C +G ++A +L EM G D + +L+ FC G++ +AFE+
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQ 263
G + Y LI L + ++AF+L+ ML++ + PD YT L+
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKA 351
Query: 264 AQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIG 323
+ A L M KG PD YNA+I LC EE + M E
Sbjct: 352 GKIEDALKLLSSMPSKGISPD--------TYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 324 LSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED 383
PDA +++ +I CR + +A ++ E++K S SV
Sbjct: 404 SFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCS------------PSVA------- 444
Query: 384 TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWF 443
TF+ L+ G L++A LL ++ V S+FL
Sbjct: 445 TFNALIDGLCKSGELKEARLLLHKME------VGRPASLFLR------------------ 480
Query: 444 ISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPD 503
+SH R +DT++E+ G + KA R + PD
Sbjct: 481 LSHSGNRS-----FDTMVES-------------------GSILKAYRDLAHFADTGSSPD 516
Query: 504 GAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRR 554
YN+LI CR G++ A + + G +P + LI L V R
Sbjct: 517 IVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGR 567
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 157/359 (43%), Gaps = 61/359 (16%)
Query: 39 KGLADET-TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDK 93
KG++ +T YN ++ A C G +EE + M+E+ D T+T LI C G +
Sbjct: 367 KGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL----------------- 136
A ++F E+ +G SPSVAT+NA++ C+ +EA +L +
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 137 ----------------------IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK 174
+ G P+++S+N L+ GFC G ++ A +LL + K
Sbjct: 487 RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLK 546
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEM---KAEMVHKGILPDADTYGPLIGSLCLQQTL 231
GL+ D TY +LI+ G+ E+AF++ K + H Y L+ C ++ +
Sbjct: 547 GLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRH-----SPAVYRSLMTWSCRKRKV 601
Query: 232 SEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIST 291
AF+L+ + L++ D++T + ++ + + +A E+ + + G
Sbjct: 602 LVAFNLWMKYLKKISCLDDETANEIEQCFK-EGETERALRRLIELDTRK--DELTLG--- 655
Query: 292 SHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
Y + GLC R EAL + + E + S +I G C+ +L A ++
Sbjct: 656 ---PYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEV 711
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 8/264 (3%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TYT L++ +C +A +++ +MID G P + +N ++ R + +A+ + +
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+G PN+ S+ +++ FC + ME A E +M GL D YT LI F + K+
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+ +E+ EM KG PD TY LI + Q+ ++ +M++ + P T+ +
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 478
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
M +Y + + + DEMI KG PD +Y +I GL ++ EA L
Sbjct: 479 MKSYFVARNYEMGRAVWDEMIKKGICPD--------DNSYTVLIRGLISEGKSREACRYL 530
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCR 340
M + G+ + Y+ F R
Sbjct: 531 EEMLDKGMKTPLIDYNKFAADFHR 554
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 140/318 (44%), Gaps = 11/318 (3%)
Query: 24 RGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIH 83
R F + E+ KGL T+ + A ++A+GI M + I+
Sbjct: 208 RQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETIN 267
Query: 84 LFCD---QGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
D + + K +V + + F+P++ TY ++ +CR + EA I +I+ G
Sbjct: 268 CLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHG 327
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
+P++++ N +++G K +A +L M KG + ++YT +I FC + +E A
Sbjct: 328 LKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 387
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
E +MV G+ PDA Y LI Q+ L ++L +EM +G PD KTY L+
Sbjct: 388 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLM 447
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
Q + ++MI P S T+N I+ + E + M
Sbjct: 448 ANQKMPEHGTRIYNKMIQNEIEP--------SIHTFNMIMKSYFVARNYEMGRAVWDEMI 499
Query: 321 EIGLSPDAVSYSTVIFGF 338
+ G+ PD SY+ +I G
Sbjct: 500 KKGICPDDNSYTVLIRGL 517
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 154/367 (41%), Gaps = 29/367 (7%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D TY S++ + Q + V EM G ++ T+ + A+ K ++A+GI
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIF 251
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ + F+ + + N L+ G+ K+ + ++L + ++ + TYT L++ +C
Sbjct: 252 ELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 310
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
+ +A + +M+ G+ PD + ++ L S+A LF M +G P+ ++Y
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
T ++ + Q+ A D+M+ G PD Y +I G + +
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPD--------AAVYTCLITGFGTQKKLDTVY 422
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDK 373
E+L+ M E G PD +Y+ +I + ++ +M + ++I+
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM------------IQNEIEP 470
Query: 374 SVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARI 433
S+ TF+ +M Y + E + E+ P D Y+V + L + +
Sbjct: 471 SI-------HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 523
Query: 434 TEAKHHL 440
EA +L
Sbjct: 524 REACRYL 530
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 10/253 (3%)
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
GF+ TYN+++ + ++F + +L + +G + +F ++ F + ++A
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKA 247
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
+ + M + + +T L+ + K+ K ++ + + + P+ TY L+
Sbjct: 248 VGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 306
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
C + L EA ++ +M+ GL PD + ++ + S A L M KG P+
Sbjct: 307 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 366
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL 344
+Y +I C E A+E M + GL PDA Y+ +I GF ++L
Sbjct: 367 V--------RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 345 GKAYKLKVEMDKK 357
Y+L EM +K
Sbjct: 419 DTVYELLKEMQEK 431
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 16/224 (7%)
Query: 12 LRNRVPPPDV-----MIRGFAAAWTETEKTNW------KGL-ADETTYNKLVLACCRDGR 59
++++ P P+V MIR F + + GL D Y L+ +
Sbjct: 358 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 417
Query: 60 VEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNA 115
++ +L+ M E D TY +LI L +Q + +++ +MI PS+ T+N
Sbjct: 418 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 477
Query: 116 IVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKG 175
I+ +Y + + + +I++G P+ S+ L++G +GK EA L+EM KG
Sbjct: 478 IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 537
Query: 176 LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ Y F G+ E E+ G A+ +
Sbjct: 538 MKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFA 581
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 8/264 (3%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TYT L++ +C +A +++ +MID G P + +N ++ R + +A+ + +
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+G PN+ S+ +++ FC + ME A E +M GL D YT LI F + K+
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+ +E+ EM KG PD TY LI + Q+ ++ +M++ + P T+ +
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
M +Y + + + DEMI KG PD +Y +I GL ++ EA L
Sbjct: 480 MKSYFVARNYEMGRAVWDEMIKKGICPD--------DNSYTVLIRGLISEGKSREACRYL 531
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCR 340
M + G+ + Y+ F R
Sbjct: 532 EEMLDKGMKTPLIDYNKFAADFHR 555
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 140/318 (44%), Gaps = 11/318 (3%)
Query: 24 RGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIH 83
R F + E+ KGL T+ + A ++A+GI M + I+
Sbjct: 209 RQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETIN 268
Query: 84 LFCD---QGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
D + + K +V + + F+P++ TY ++ +CR + EA I +I+ G
Sbjct: 269 CLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHG 328
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
+P++++ N +++G K +A +L M KG + ++YT +I FC + +E A
Sbjct: 329 LKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 388
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
E +MV G+ PDA Y LI Q+ L ++L +EM +G PD KTY L+
Sbjct: 389 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLM 448
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
Q + ++MI P S T+N I+ + E + M
Sbjct: 449 ANQKMPEHGTRIYNKMIQNEIEP--------SIHTFNMIMKSYFVARNYEMGRAVWDEMI 500
Query: 321 EIGLSPDAVSYSTVIFGF 338
+ G+ PD SY+ +I G
Sbjct: 501 KKGICPDDNSYTVLIRGL 518
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 153/364 (42%), Gaps = 29/364 (7%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TY S++ + Q + V EM G ++ T+ + A+ K ++A+GI +
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+ F+ + + N L+ G+ K+ + ++L + ++ + TYT L++ +C +
Sbjct: 256 KKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+A + +M+ G+ PD + ++ L S+A LF M +G P+ ++YT +
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
+ + Q+ A D+M+ G PD Y +I G + + E+L
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPD--------AAVYTCLITGFGTQKKLDTVYELL 426
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVM 376
+ M E G PD +Y+ +I + ++ +M + ++I+ S+
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM------------IQNEIEPSI- 473
Query: 377 QGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
TF+ +M Y + E + E+ P D Y+V + L + + EA
Sbjct: 474 ------HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Query: 437 KHHL 440
+L
Sbjct: 528 CRYL 531
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 10/253 (3%)
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
GF+ + TYN+++ + ++F + +L + +G + +F ++ F + ++A
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKA 248
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
+ + M + + +T L+ + K+ K ++ + + + P+ TY L+
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
C + L EA ++ +M+ GL PD + ++ + S A L M KG P+
Sbjct: 308 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 367
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL 344
+Y +I C E A+E M + GL PDA Y+ +I GF ++L
Sbjct: 368 V--------RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 345 GKAYKLKVEMDKK 357
Y+L EM +K
Sbjct: 420 DTVYELLKEMQEK 432
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 16/224 (7%)
Query: 12 LRNRVPPPDV-----MIRGFAAAWTETEKTNW------KGL-ADETTYNKLVLACCRDGR 59
++++ P P+V MIR F + + GL D Y L+ +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 60 VEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNA 115
++ +L+ M E D TY +LI L +Q + +++ +MI PS+ T+N
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 478
Query: 116 IVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKG 175
I+ +Y + + + +I++G P+ S+ L++G +GK EA L+EM KG
Sbjct: 479 IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 538
Query: 176 LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ Y F G+ E E+ G A+ +
Sbjct: 539 MKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFA 582
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 210/487 (43%), Gaps = 57/487 (11%)
Query: 33 TEKTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCD 87
T K G+ D TY L+ R+ + +L+ M S + Y +L+H C
Sbjct: 170 TRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCK 229
Query: 88 QGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS 147
G+ +A + +EM + P+ T+N ++ AYC +++ +++ +L GF P++++
Sbjct: 230 NGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVT 285
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
+++ C +G++ EA E+L+ + KG +D +L+ +C GK+ A EM
Sbjct: 286 VTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEME 345
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFS 267
KG LP+ +TY LI C L A D F +M + + T+ L+ + +
Sbjct: 346 RKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTD 405
Query: 268 KAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPD 327
+ + M D V G YN +I+G +R E+ALE L M + L P
Sbjct: 406 DGLKILEMMQDS----DTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEK--LFPR 457
Query: 328 AVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSN 387
AV S + C E G LK D+ +G G+ I +SH
Sbjct: 458 AVDRSFKLISLC---EKGGMDDLKTAYDQ----MIGEGGVPSII-------VSH-----C 498
Query: 388 LMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHV 447
L+ Y G +E++ L ++ YLP ++ + K+ ++ + F+ +
Sbjct: 499 LIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNG----IKFVEDM 554
Query: 448 CLR--MPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGA 505
R +P Y+ L+E ++G ++KA RM+E + PD +
Sbjct: 555 AERGCVPDTESYNPLLEE---------------LCVKGDIQKAWLLFSRMVEKSIVPDPS 599
Query: 506 VYNLLIF 512
+++ L+F
Sbjct: 600 MWSSLMF 606
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 183/418 (43%), Gaps = 46/418 (11%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
+ YN L+ A C++G+V A ++ M E ++ T+ LI +C++ + ++ + +
Sbjct: 216 NAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCF 275
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
GF P V T ++ C + R EAL +L + +G + ++++ N LV+G+C GKM
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
A+ EM +KG + +TY LI +C+ G ++ A + +M I + T+ LI
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Query: 223 GSLCLQQTLSEAFDLFQEM----------------LRRGLSPDNKTYTGLMSAYRLQAQF 266
L + + + + M + G +N+ L +++ F
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLF 455
Query: 267 SKAFHLQDEMI---HKGFLPDFVT--------GISTSHVTYNAIIHGLCLLDRAEEALEI 315
+A ++I KG + D T G S + + +IH + EE+LE+
Sbjct: 456 PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLEL 515
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSV 375
+ M G P + +++ VI GFC+ ++ K +M ++
Sbjct: 516 INDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGC---------------- 559
Query: 376 MQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARI 433
+ ++++ L+ + +G ++KA+LL + +P +S + L++K I
Sbjct: 560 ---VPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAI 614
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/544 (21%), Positives = 211/544 (38%), Gaps = 92/544 (16%)
Query: 76 NTYTSLIHLFCDQGQCDKAYKVFAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILR 134
+TY +L H C + D Y++ EM D+ G P A + I+ + R + + + ++
Sbjct: 77 STYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVD 136
Query: 135 CLIERGFEPNLISFNA-----------------------------------LVQGFCGKG 159
+ + G +P+L FN+ L++G
Sbjct: 137 LVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTN 196
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
++ + +LLQ M G+A + Y +L+H C GKV +A + +EM P+ T+
Sbjct: 197 RIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFN 252
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
LI + C +Q L ++ L ++ G PD T T +M + + S+A + + + K
Sbjct: 253 ILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESK 312
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
G D V N ++ G C L + A M G P+ +Y+ +I G+C
Sbjct: 313 GGKVDV--------VACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYC 364
Query: 340 RIRELGKAYKLKVEMDKKSISW-----------LGLWGLYDD--------IDKSVMQGLS 380
+ L A +M +I W L + G DD D + G +
Sbjct: 365 DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHG-A 423
Query: 381 HEDTFSNLMSDYLAEGHLEKA--YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKH 438
D ++ ++ + E E A +LL+ E P V S L L +K + + K
Sbjct: 424 RIDPYNCVIYGFYKENRWEDALEFLLKME----KLFPRAVDRSFKLISLCEKGGMDDLKT 479
Query: 439 HLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEG 498
I +P+ I+ LI S + G ++++ + M+
Sbjct: 480 AYDQMIGEG--GVPSIIVSHCLIHRYSQH---------------GKIEESLELINDMVTR 522
Query: 499 NYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKM 558
Y P + +N +I C+ V +M G P S L+E L CV+ +
Sbjct: 523 GYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEEL-CVKGDIQK 581
Query: 559 SWVI 562
+W++
Sbjct: 582 AWLL 585
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 41/284 (14%)
Query: 30 WTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLF 85
+ E E+ + L + TYN L+ C G ++ AL M + T+ +LI
Sbjct: 341 FIEMERKGY--LPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGL 398
Query: 86 CDQGQCDKAYKVFAEM--IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL------- 136
G+ D K+ M DT + YN ++ + ++ R+ +AL L +
Sbjct: 399 SIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRA 458
Query: 137 IERGFE--------------------------PNLISFNALVQGFCGKGKMEEAEELLQE 170
++R F+ P++I + L+ + GK+EE+ EL+ +
Sbjct: 459 VDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELIND 518
Query: 171 MNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQT 230
M +G T+ ++I FC + KV + +M +G +PD ++Y PL+ LC++
Sbjct: 519 MVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGD 578
Query: 231 LSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
+ +A+ LF M+ + + PD ++ LM + LQD
Sbjct: 579 IQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQD 622
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 131/341 (38%), Gaps = 63/341 (18%)
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDR 308
D K+ +G + +R + F H S TY A+ H LC+ R
Sbjct: 52 DQKSASGALETFRWASTFPGFIH--------------------SRSTYRALFHKLCVFRR 91
Query: 309 AEEALEILRGMPE-IGLSPDAVSYSTVIFGFCRIRELGKAY-------KLKVEMDKKSIS 360
+ ++L MP+ IGL PD + T+I GF R R + + K ++ K +
Sbjct: 92 FDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFN 151
Query: 361 WLGLWGLYDDID-------KSVMQGLSHED--TFSNLMSDYLAEGHLEKAYLLEREINYF 411
+ + +DID + +M H D T+ LM + + L + +
Sbjct: 152 SILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTS 211
Query: 412 DYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNE--F 469
P V Y+ L+ L K ++ A+ +S ++ P + ++ LI N +
Sbjct: 212 GVAPNAVVYNTLLHALCKNGKVGRARS----LMSE--MKEPNDVTFNILISAYCNEQKLI 265
Query: 470 KSVVGLVKGFGM------------------RGLMKKAARAHDRMLEGNYKPDGAVYNLLI 511
+S+V L K F + G + +A +R+ K D N L+
Sbjct: 266 QSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLV 325
Query: 512 FDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCV 552
+C G + A ++EM G+ P++ + LI C V
Sbjct: 326 KGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDV 366
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 199/481 (41%), Gaps = 52/481 (10%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D + L+ + G ++ ++VF E++D+GFS SV T N ++ + + +
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ G PN +FN L FC E ++ L++M ++G D TY +L+ +C +
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
G++++AF + M + ++PD TY LI LC + EA F M+ RG+ PD +Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
L+ AY + ++ L EM+ +PD T I+ G R A+
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPD--------RFTCKVIVEGFVREGRLLSAV 396
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDK 373
+ + + + + + F + + GK + K +D+
Sbjct: 397 NFVVELRRLKVD---IPFEVCDFLIVSLCQEGKPFAAKHLLDR----------------- 436
Query: 374 SVMQGLSHE---DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKK 430
+++ HE +T++NL+ +E+A +L+ ++ + + Y + L +
Sbjct: 437 -IIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRI 495
Query: 431 ARITEAKHHLL-WFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAA 489
R EA+ + F S V + +FI + C +F L+ F M +
Sbjct: 496 GRNREAESLMAEMFDSEV--KPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRI---- 549
Query: 490 RAHDRMLEGNYKPDGAVYNLLIFDHCRCG-NVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
+ P+ YN L+ C G KA ++ M GF P+ + LI+
Sbjct: 550 ----------FDPES--YNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQV 597
Query: 549 L 549
L
Sbjct: 598 L 598
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 144/310 (46%), Gaps = 13/310 (4%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
T+N L C D E L M E D TY +L+ +C +G+ +A+ ++ M
Sbjct: 238 TFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIM 297
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
P + TY +++ C+D R REA +++RG +P+ +S+N L+ +C +G M
Sbjct: 298 YRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMM 357
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+++++LL EM + D T ++ F +G++ A E+ + + L
Sbjct: 358 QQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFL 417
Query: 222 IGSLCLQQTLSEAFDLFQEML-RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
I SLC + A L ++ G +TY L+ + S+ +++ ++ KG
Sbjct: 418 IVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIES------LSRCDAIEEALVLKG 471
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
L + + TY A+I LC + R EA ++ M + + PD+ +++G+C+
Sbjct: 472 KLKNQNQVLDAK--TYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCK 529
Query: 341 IRELGKAYKL 350
+ KA +L
Sbjct: 530 ELDFDKAERL 539
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 54/346 (15%)
Query: 34 EKTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQ 88
EK +G D TYN LV + CR GR++EA + + M D TYTSLI C
Sbjct: 260 EKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKD 319
Query: 89 GQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISF 148
G+ +A++ F M+D G P +YN ++ AYC++ +++ +L ++ P+ +
Sbjct: 320 GRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTC 379
Query: 149 NALVQGF-----------------------------------CGKGKMEEAEELLQE-MN 172
+V+GF C +GK A+ LL +
Sbjct: 380 KVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIE 439
Query: 173 QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLS 232
++G +TY +LI +E+A +K ++ ++ + DA TY LIG LC
Sbjct: 440 EEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNR 499
Query: 233 EAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD--EMIHKGFLPDFVTGIS 290
EA L EM + PD+ L+ Y + F KA L M + F P+
Sbjct: 500 EAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPE------ 553
Query: 291 TSHVTYNAIIHGLCLLDRA-EEALEILRGMPEIGLSPDAVSYSTVI 335
+YN+++ +C ++ALE+ M +G P+ ++ +I
Sbjct: 554 ----SYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLI 595
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 188/469 (40%), Gaps = 67/469 (14%)
Query: 103 DTGFSPSVATYNAIVLAYCRDKRF----------------REALGILRCLIERGFEPNL- 145
D G P+V Y ++ K+F +E + + R L+ E N
Sbjct: 106 DLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWD 165
Query: 146 -ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKA 204
+ F+ LV+G+ G +EE + +E+ G ++ T L++ +E +++ +
Sbjct: 166 PVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYS 225
Query: 205 EMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQA 264
M GI P+ T+ L C E D ++M G PD TY L+S+Y +
Sbjct: 226 VMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRG 285
Query: 265 QFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGL 324
+ +AF+L M + +PD VT Y ++I GLC R EA + M + G+
Sbjct: 286 RLKEAFYLYKIMYRRRVVPDLVT--------YTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Query: 325 SPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDT 384
PD +SY+T+I+ +C+ + ++ KL EM S+ + T
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV-------------------VPDRFT 378
Query: 385 FSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSV--FLNV-LNKKARITEAKHHLL 441
++ ++ EG L A E+ L VD+ + V FL V L ++ + AKH L
Sbjct: 379 CKVIVEGFVREGRLLSAVNFVVELRR---LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLD 435
Query: 442 WFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYK 501
I Y+ LIE+ S + + + ++G +K N
Sbjct: 436 RIIEEEGHEAKP-ETYNNLIESLSRCD-----AIEEALVLKGKLKNQ----------NQV 479
Query: 502 PDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
D Y LI CR G +A + EM P F AL+ C
Sbjct: 480 LDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYC 528
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAES-----DENTYTSLIHLFCDQGQCDKAYK 96
A TYN L+ + R +EEAL +L+G ++ D TY +LI C G+ +A
Sbjct: 445 AKPETYNNLIESLSRCDAIEEAL-VLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAES 503
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE--RGFEPNLISFNALVQG 154
+ AEM D+ P A+V YC++ F +A +L R F+P S+N+LV+
Sbjct: 504 LMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPE--SYNSLVKA 561
Query: 155 FCGKG-KMEEAEELLQEMNQKGLALDDKTYTSLIHLF 190
C G ++A EL + M + G + T LI +
Sbjct: 562 VCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 159/367 (43%), Gaps = 59/367 (16%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
D T+N L+ C++ V+EA I + M D TY ++I C G+ A+ V
Sbjct: 208 DSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVL 267
Query: 99 AEMID--TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF- 155
+ M+ T P+V +Y +V YC + EA+ + ++ RG +PN +++N L++G
Sbjct: 268 SGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLS 327
Query: 156 ------------------------------------CGKGKMEEAEELLQEMNQKGLALD 179
C G ++ A ++ QEM L D
Sbjct: 328 EAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPD 387
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL-------PDADTYGPLIGSLCLQQTLS 232
+Y+ LI C + + ++A + E+ K +L P A Y P+ LC
Sbjct: 388 SASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTK 447
Query: 233 EAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTS 292
+A +F+++++RG+ D +Y L++ + + +F A+ L M+ + F+PD
Sbjct: 448 QAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDL------- 499
Query: 293 HVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKV 352
TY +I GL + A A + L+ M P A ++ +V+ + + +++ L
Sbjct: 500 -ETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVT 558
Query: 353 EMDKKSI 359
M +K I
Sbjct: 559 LMLEKRI 565
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 140/294 (47%), Gaps = 9/294 (3%)
Query: 69 GMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFRE 128
G + + + SLI + + G ++ K+F M G SPSV T+N+++ + R
Sbjct: 132 GCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGM 191
Query: 129 ALGILRCLIER-GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
A + + G P+ +FN L+ GFC ++EA + ++M D TY ++I
Sbjct: 192 AHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTII 251
Query: 188 HLFCNKGKVEKAFEMKAEMVHKG--ILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
C GKV+ A + + M+ K + P+ +Y L+ C++Q + EA +F +ML RG
Sbjct: 252 DGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCL 305
L P+ TY L+ ++ + ++D +I D T + T+N +I C
Sbjct: 312 LKPNAVTYNTLIKGLSEAHRYDE---IKDILIGGN---DAFTTFAPDACTFNILIKAHCD 365
Query: 306 LDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
+ A+++ + M + L PD+ SYS +I C E +A L E+ +K +
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEV 419
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 180/438 (41%), Gaps = 61/438 (13%)
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
FN+L++ + G +E+ +L Q M Q G++ T+ SL+ + +G+ A ++ EM
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 208 HK-GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF 266
G+ PD+ T+ LI C + EAF +F++M +PD TY ++ +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 267 SKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSP 326
A ++ M+ K T + + V+Y ++ G C+ +EA+ + M GL P
Sbjct: 261 KIAHNVLSGMLKKA------TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314
Query: 327 DAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFS 386
+AV+Y+T+I G L +A++ YD+I ++ G TF+
Sbjct: 315 NAVTYNTLIKG------LSEAHR------------------YDEIKDILIGGNDAFTTFA 350
Query: 387 N-------LMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHH 439
L+ + GHL+ A + +E+ P YSV + L + A+
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 440 LLWFISHVCLR-----MPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHD 493
L P Y+ + E C+N + K + R LMK+ +
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKV-----FRQLMKRGVQ--- 462
Query: 494 RMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVR 553
D Y LI HCR G AY++ + M+ F P + + LI+ L +
Sbjct: 463 ---------DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIG 513
Query: 554 RYNKMSWVIQNTLRSCNL 571
+Q LRS L
Sbjct: 514 EALLAHDTLQRMLRSSYL 531
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 146/358 (40%), Gaps = 74/358 (20%)
Query: 39 KGL-ADETTYNKLVLACCRDGRVEEALGILRGMAES------DENTYTSLIHLFCDQGQC 91
+GL + TYN L+ R +E IL G ++ D T+ LI CD G
Sbjct: 310 RGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHL 369
Query: 92 DKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGF-------EPN 144
D A KVF EM++ P A+Y+ ++ C F A + L E+ +P
Sbjct: 370 DAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL 429
Query: 145 LISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKA 204
++N + + C GK ++AE++ +++ ++G+ D +Y +LI C +GK + A+E+
Sbjct: 430 AAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLV 488
Query: 205 EMVHKGILPDADTYGPLIGSL-----------CLQQTLSEAF--------DLFQEMLRRG 245
M+ + +PD +TY LI L LQ+ L ++ + E+ +R
Sbjct: 489 LMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRK 548
Query: 246 LSPDNKTYTGLMSAYRLQ----------------AQFSKAFHLQDEMIHKGFLPDF---- 285
+ ++ LM R++ AQ KAF + + G+L
Sbjct: 549 FANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELL 608
Query: 286 ----------------VTGISTSHV----TYNAIIHGLCLLDRAEEALEILRGMPEIG 323
+ + S + T N +I GLC R EA + + E+G
Sbjct: 609 GYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 142/323 (43%), Gaps = 23/323 (7%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D T+N L+ A C G ++ A+ + + M D +Y+ LI C + + D+A +F
Sbjct: 352 DACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLF 411
Query: 99 AEMIDTGF-------SPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
E+ + P A YN + C + + ++A + R L++RG + + S+ L
Sbjct: 412 NELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTL 470
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
+ G C +GK + A ELL M ++ D +TY LI G+ A + M+
Sbjct: 471 ITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSY 530
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
LP A T+ ++ L ++ +E+F L ML + + + T ++ AQ KAF
Sbjct: 531 LPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFL 590
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
+ + G+L V ++ LC + +A ++ E D +
Sbjct: 591 IVRLLYDNGYL-----------VKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTC 639
Query: 332 STVIFGFCRIRELGKAYKLKVEM 354
+TVI G C+ + +A+ L E+
Sbjct: 640 NTVIEGLCKHKRHSEAFSLYNEL 662
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 142/368 (38%), Gaps = 85/368 (23%)
Query: 196 VEKAFEMKAEMVHKGILPDADTY-GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYT 254
V + F E G + D Y LI S E+ LFQ M + G+SP T+
Sbjct: 118 VARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFN 177
Query: 255 GLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALE 314
L+S + + A L DEM G++ T+N +I+G C +EA
Sbjct: 178 SLLSILLKRGRTGMAHDLFDEMRR-------TYGVTPDSYTFNTLINGFCKNSMVDEAFR 230
Query: 315 ILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKS 374
I + M +PD V+Y+T+I G CR ++ A+ + M KK+ D+ +
Sbjct: 231 IFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKAT----------DVHPN 280
Query: 375 VMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARIT 434
V+ +++ L+ Y + +++A L VF ++L++ +
Sbjct: 281 VV-------SYTTLVRGYCMKQEIDEAVL------------------VFHDMLSRGLK-- 313
Query: 435 EAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDR 494
P + Y+TLI+ S + D
Sbjct: 314 -----------------PNAVTYNTLIKGLSEAH------------------RYDEIKDI 338
Query: 495 MLEGN-----YKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
++ GN + PD +N+LI HC G++ A ++ EM++ P S LI L
Sbjct: 339 LIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Query: 550 CCVRRYNK 557
C +++
Sbjct: 399 CMRNEFDR 406
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 158/348 (45%), Gaps = 47/348 (13%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D YN L+ A +D E+A + M + DE TYT +I G+CD+A +F
Sbjct: 237 DIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLF 293
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EMI G + +V YN ++ + K +A+ + ++E G PN +++ L+ +
Sbjct: 294 NEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAE 353
Query: 159 GKM--------------------------------EEAEELLQEMNQKGLALDDKTYTSL 186
G++ EA L +M + + +Y S+
Sbjct: 354 GQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSM 413
Query: 187 IHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL 246
+ C GK +A EM +++ KG++ D Y + +L + +S DLF++M + G
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGP 473
Query: 247 SPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLL 306
SPD TY L++++ + +A ++ +E+ PD ++YN++I+ L
Sbjct: 474 SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDI--------ISYNSLINCLGKN 525
Query: 307 DRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
+EA + M E GL+PD V+YST++ F + + AY L EM
Sbjct: 526 GDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM 573
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 13/245 (5%)
Query: 24 RGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYT 79
R F W+ K + +Y ++ + C G+ EA+ +L + E +D Y
Sbjct: 393 RLFCDMWSFPVK------GERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYN 446
Query: 80 SLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER 139
++ Q + +F +M G SP + TYN ++ ++ R EA+ I L
Sbjct: 447 TVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERS 506
Query: 140 GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKA 199
+P++IS+N+L+ G ++EA +EM +KGL D TY++L+ F +VE A
Sbjct: 507 DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMA 566
Query: 200 FEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
+ + EM+ KG P+ TY L+ L +EA DL+ +M ++GL+PD+ TYT L
Sbjct: 567 YSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL--- 623
Query: 260 YRLQA 264
RLQ+
Sbjct: 624 ERLQS 628
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 159/377 (42%), Gaps = 85/377 (22%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
DE TY ++ R G+ +EA+G+ M + Y +L+ + DKA +VF
Sbjct: 269 DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328
Query: 99 AEMIDTGFSPSVATYN---AIVLAYCRDKRFREALGILRCLIERGFEPNLI--------- 146
+ M++TG P+ TY+ +++A + R + I + + +G L+
Sbjct: 329 SRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHV 388
Query: 147 --------------------SFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDK----- 181
S+ ++++ CG GK EA E+L ++++KG+ D
Sbjct: 389 SEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTV 448
Query: 182 ------------------------------TYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
TY LI F G+V++A + E+
Sbjct: 449 FSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDC 508
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
PD +Y LI L + EA F+EM +GL+PD TY+ LM + + A+
Sbjct: 509 KPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYS 568
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
L +EM+ KG P+ VTYN ++ L R EA+++ M + GL+PD+++Y
Sbjct: 569 LFEEMLVKGCQPNI--------VTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
Query: 332 S------TVIFGFCRIR 342
+ +V G RIR
Sbjct: 621 TVLERLQSVSHGKSRIR 637
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 120/563 (21%), Positives = 236/563 (41%), Gaps = 88/563 (15%)
Query: 43 DETTYNKLVLACCRDG---RVEEALGILRGMAESDENTYTSLIHLFC-------DQGQCD 92
D YN+++L R R + IL M +S+ + S +++ D C
Sbjct: 132 DPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCL 191
Query: 93 KAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG-FEPNLISFNAL 151
+ K + +++ TY ++ AY R + + +A + C I RG + ++ ++N L
Sbjct: 192 RLVKKWDLKMNS------FTYKCLLQAYLRSRDYSKAFDVY-CEIRRGGHKLDIFAYNML 244
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
+ K E+A ++ ++M ++ D+ TYT +I GK ++A + EM+ +G+
Sbjct: 245 LDAL---AKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGL 301
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSK--- 268
+ Y L+ L + + +A +F M+ G P+ TY+ L++ + Q +
Sbjct: 302 TLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDG 361
Query: 269 AFHLQDEMIHKGFLPDFVTGIST-SHVT--------------------YNAIIHGLCLLD 307
+ + +G V +S HV+ Y +++ LC
Sbjct: 362 VVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAG 421
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGL 367
+ EA+E+L + E G+ D + Y+TV +++++ + L +M K G
Sbjct: 422 KTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD--------GP 473
Query: 368 YDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVL 427
DI T++ L++ + G +++A + E+ D P + Y+ +N L
Sbjct: 474 SPDIF-----------TYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 428 NKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKK 487
K + EA H+ + P + Y TL+E C FG ++
Sbjct: 523 GKNGDVDEA--HVRFKEMQEKGLNPDVVTYSTLME-C--------------FGKTERVEM 565
Query: 488 AARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPH--MFSVLAL 545
A + ML +P+ YN+L+ + G +A D+Y +M G P ++VL
Sbjct: 566 AYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLER 625
Query: 546 IEALCC----VRRYNKMS-WVIQ 563
++++ +RR N ++ WV+
Sbjct: 626 LQSVSHGKSRIRRKNPITGWVVS 648
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 181/423 (42%), Gaps = 42/423 (9%)
Query: 38 WKGLADETTYNKLVLACCRDGRVEEALG----ILRGMAESDENTYTSLIHLFCDQGQCDK 93
W + TY L+ A R +A I RG + D Y L+ +K
Sbjct: 197 WDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EK 253
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A +VF +M TY ++ R + EA+G+ +I G N++ +N L+Q
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ 313
Query: 154 GFCGKGKM-EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKG---KVEKAFEMKAEMVHK 209
KGKM ++A ++ M + G ++ TY+ L++L +G +++ E+ + +
Sbjct: 314 -VLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQ 372
Query: 210 GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKA 269
GI Y L+ +L +SEA LF +M + + +Y ++ + + +A
Sbjct: 373 GI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 270 FHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAV 329
+ ++ KG + T + YN + L L + ++ M + G SPD
Sbjct: 427 IEMLSKIHEKG--------VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIF 478
Query: 330 SYSTVIFGFCRIRELGKAYKLKVEMDKKSI--------SWLGLWGLYDDIDKSVM----- 376
+Y+ +I F R+ E+ +A + E+++ S + G D+D++ +
Sbjct: 479 TYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538
Query: 377 --QGLSHE-DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARI 433
+GL+ + T+S LM + +E AY L E+ P V Y++ L+ L K R
Sbjct: 539 QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRT 598
Query: 434 TEA 436
EA
Sbjct: 599 AEA 601
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 29/300 (9%)
Query: 82 IHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGF 141
+ ++G ++A +V+ + D G S SV T N+++L + ++ + + ++E F
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF 211
Query: 142 EPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFE 201
+ I L++ C G + E ELL++ ++GL Y LI FC G E
Sbjct: 212 DSERI--RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE 269
Query: 202 MKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYR 261
+ M+ P Y +I LC+ + EA+ +F+ + +G +PD YT ++ +
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFC 329
Query: 262 LQAQFSKAFHLQDEMIHKGFLPD---------------------------FVTGISTSHV 294
+ A L EMI KG P+ G + +
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTML 389
Query: 295 TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
+ N +I G C +++EA EI + M E G++P+A++Y+ +I GFC+ ++ K KL E+
Sbjct: 390 SCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 134/293 (45%), Gaps = 10/293 (3%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAES--DENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
T N ++L C + +++ + + M ES D LI CD G + Y++ + +
Sbjct: 181 VTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGL 240
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
G P Y ++ +C + +L +I P++ + +++G C K
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQL 300
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
EA + + + KG A D YT++I FC KG + A ++ EM+ KG+ P+ Y +I
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
+ +S + EMLR G + ++ + + +AF + M
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSE---- 416
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
TG++ + +TYNA+I G C ++ E+ L++ + + +GL P ++Y+ ++
Sbjct: 417 ----TGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 12/270 (4%)
Query: 50 LVLACCRDGRVEEALGILR-GMAES---DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTG 105
L+ A C G V E +L+ G+ + + Y LI FC+ G +V MI
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 106 FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
PS+ Y I+ C +K+ EA I + L ++G+ P+ + + +++GFC KG + A
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSL 225
+L EM +KG+ ++ Y +IH +G++ EM+ G + +I
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Query: 226 CLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDF 285
C EAF++F+ M G++P+ TY L+ + + + K L E+ G P
Sbjct: 399 CSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKP-- 456
Query: 286 VTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
S + Y A++ L + D +L +
Sbjct: 457 ------SGMAYAALVRNLKMSDSVATSLNL 480
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 117/255 (45%), Gaps = 15/255 (5%)
Query: 106 FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
++P + N + A K + A L GF+P V+ +G +EEA
Sbjct: 109 YTPGPVSLNILFGALLDGKAVKAAKSFLDTT---GFKPEPTLLEQYVKCLSEEGLVEEAI 165
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKG-KVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
E+ + G++ T S++ L C K K+++ +E+ EMV D++ LI +
Sbjct: 166 EVYNVLKDMGISSSVVTCNSVL-LGCLKARKLDRFWELHKEMVESEF--DSERIRCLIRA 222
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
LC +SE ++L ++ L++GL P Y L+S + ++ + MI P
Sbjct: 223 LCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFP- 281
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL 344
S Y II GLC+ + EA I + + + G +PD V Y+T+I GFC L
Sbjct: 282 -------SMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWL 334
Query: 345 GKAYKLKVEMDKKSI 359
G A KL EM KK +
Sbjct: 335 GSARKLWFEMIKKGM 349
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 136/376 (36%), Gaps = 53/376 (14%)
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
GK KA K+ + G P+ + L + + EA +++ + G+S T
Sbjct: 126 GKAVKA--AKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTC 183
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
++ + + + L EM+ F + + +I LC E
Sbjct: 184 NSVLLGCLKARKLDRFWELHKEMVESEFDSERI----------RCLIRALCDGGDVSEGY 233
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDK 373
E+L+ + GL P Y+ +I GFC I Y E+ I+W +Y I +
Sbjct: 234 ELLKQGLKQGLDPGQYVYAKLISGFCEIGN----YACMSEVLHTMIAWNHFPSMY--IYQ 287
Query: 374 SVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARI 433
+++GL + + LE AY + + + Y P V Y+ + +K +
Sbjct: 288 KIIKGLC------------MNKKQLE-AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWL 334
Query: 434 TEAKHHLLWF-ISHVCLRMPTFI-------------------IYDTLIENCSNNEFKSVV 473
A+ LWF + +R F Y+ ++ N S
Sbjct: 335 GSARK--LWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCN 392
Query: 474 GLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHY 533
++KGF G +A M E P+ YN LI C+ V K +Y E+
Sbjct: 393 TMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKAL 452
Query: 534 GFAPHMFSVLALIEAL 549
G P + AL+ L
Sbjct: 453 GLKPSGMAYAALVRNL 468
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/531 (21%), Positives = 216/531 (40%), Gaps = 54/531 (10%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKA--YKVFA 99
TYN L+ AC R+ +E+AL ++ M +SD Y+ +I + D +++
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
E+ V N I++ + + +AL +L G + +++ G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ EAE L +E+ Q G+ + Y +L+ + G ++ A M +EM +G+ PD TY
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
LI + A + +EM + P++ ++ L++ +R + ++ K F + EM
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 280 GFLPD--FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
G PD F + + +N + H + DR M G+ PD V+++T+I
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDR----------MLSEGIEPDRVTWNTLIDC 488
Query: 338 FCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGH 397
C+ A ++ M+++ L T++ +++ Y +
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGC-------------------LPCATTYNIMINSYGDQER 529
Query: 398 LEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIY 457
+ L ++ LP V ++ ++V K R +A L + V L+ P+ +Y
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAI-ECLEEMKSVGLK-PSSTMY 587
Query: 458 DTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRC 517
+ LI + RGL ++A A M KP N LI
Sbjct: 588 NALI---------------NAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGED 632
Query: 518 GNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRS 568
+A+ + M G P + + L++AL V ++ K+ V + + S
Sbjct: 633 RRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMS 683
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 121/551 (21%), Positives = 219/551 (39%), Gaps = 59/551 (10%)
Query: 44 ETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMID 103
E Y+ L+ A R ++ EA +L TY +LI +KA + A+M
Sbjct: 167 ELLYSILIHALGRSEKLYEAF-LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCL--IERG-FEPNLISFNALVQGFCGKGK 160
G+ Y+ ++ + R + +++ +LR IER E ++ N ++ GF G
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKI-DSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+A +LL GL+ T S+I + G+ +A + E+ GI P Y
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
L+ L +A + EM +RG+SPD TY+ L+ AY ++ A + EM
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAE--EALEILRGMPEIGLSPDAVSYSTVIFGF 338
P+ ++ ++ G DR E + ++L+ M IG+ PD Y+ VI F
Sbjct: 405 VQPN--------SFVFSRLLAGF--RDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 454
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED-TFSNLMSDYLAEGH 397
+ L A D+ + +G+ + T++ L+ + G
Sbjct: 455 GKFNCLDHAMT--------------------TFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 398 LEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIY 457
A + + LP Y++ +N + R + K L S L P + +
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL--PNVVTH 552
Query: 458 DTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRC 517
TL++ +G G A + M KP +YN LI + +
Sbjct: 553 TTLVD---------------VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 597
Query: 518 GNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRR----YNKMSWVIQNTLRSCNLND 573
G +A + + M G P + ++ +LI A RR + + ++ +N ++ +
Sbjct: 598 GLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTY 657
Query: 574 SELLQVLNEID 584
+ L++ L +D
Sbjct: 658 TTLMKALIRVD 668
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
E D T+ +LI C G+ A ++F M G P TYN ++ +Y +R+ +
Sbjct: 476 EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKR 535
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+L + +G PN+++ LV + G+ +A E L+EM GL Y +LI+ +
Sbjct: 536 LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYA 595
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
+G E+A M G+ P LI + + +EAF + Q M G+ PD
Sbjct: 596 QRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVV 655
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
TYT LM A +F K + +EMI G PD
Sbjct: 656 TYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 4/231 (1%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKVF 98
D T+N L+ C+ GR A + M TY +I+ + DQ + D ++
Sbjct: 478 DRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLL 537
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+M G P+V T+ +V Y + RF +A+ L + G +P+ +NAL+ + +
Sbjct: 538 GKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 597
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G E+A + M GL SLI+ F + +AF + M G+ PD TY
Sbjct: 598 GLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTY 657
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKA 269
L+ +L + +++EM+ G PD K + L SA R Q +A
Sbjct: 658 TTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 149/318 (46%), Gaps = 15/318 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
+ + +N+++ + V +A + M E D +YT L+ + + + +V
Sbjct: 196 ESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVN 255
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM D GF P V Y I+ A+C+ K++ EA+ + +R +P+ F +L+ G +
Sbjct: 256 REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSE 315
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
K+ +A E + G L+ TY +L+ +C ++E A++ EM KG+ P+A TY
Sbjct: 316 KKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTY 375
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
++ L Q EA++++Q M P TY ++ + + + A + DEM
Sbjct: 376 DIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKG 432
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
KG LP H+ ++++I LC ++ +EA E M ++G+ P +S +
Sbjct: 433 KGVLPGM-------HM-FSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTL 484
Query: 339 CRIRELGKAYKLKVEMDK 356
K L V+MD+
Sbjct: 485 LDEGRKDKVTDLVVKMDR 502
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 156/358 (43%), Gaps = 25/358 (6%)
Query: 30 WTETEKTNWKGLADETT-YNKLVLACCRDGRVEEALGILRGMAES---DENTYTSLIHLF 85
W E N KG T+ YN L+ + + + + ++ M + T+ + +
Sbjct: 117 WAE----NQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRY 172
Query: 86 CDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNL 145
+ +A F +M + GF + +N ++ + + +A + + ++ FEP++
Sbjct: 173 ARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDI 232
Query: 146 ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE 205
S+ L++G+ + + +E+ +EM +G D Y +I+ C K E+A E
Sbjct: 233 KSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE 292
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQ 265
M + P + LI L ++ L++A + F+ G + TY L+ AY +
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR 352
Query: 266 FSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLS 325
A+ DEM KG P+ TY+ I+H L + R++EA E+ + M
Sbjct: 353 MEDAYKTVDEMRLKGVGPN--------ARTYDIILHHLIRMQRSKEAYEVYQTM---SCE 401
Query: 326 PDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED 383
P +Y ++ FC L A K+ EM K + L G++ + S++ L HE+
Sbjct: 402 PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV----LPGMH--MFSSLITALCHEN 453
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 158/409 (38%), Gaps = 52/409 (12%)
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
++GF+ ++NAL++ + + L+ +M K L L +T+ + + KV+
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVK 179
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
+A +M G ++ + ++ +L + + +A +F +M ++ PD K+YT L+
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
+ + + + EM +GF PD V Y II+ C + EEA+
Sbjct: 240 EGWGQELNLLRVDEVNREMKDEGFEPDVVA--------YGIIINAHCKAKKYEEAIRFFN 291
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQ 377
M + P + ++I G ++L A + ++S
Sbjct: 292 EMEQRNCKPSPHIFCSLINGLGSEKKLNDALEF--------------------FERSKSS 331
Query: 378 GLSHE-DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
G E T++ L+ Y +E AY E+ P Y + L+ L + R EA
Sbjct: 332 GFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEA 391
Query: 437 KHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRML 496
+ + PT Y+ ++ N E + A + D M
Sbjct: 392 -----YEVYQTMSCEPTVSTYEIMVRMFCNKE---------------RLDMAIKIWDEMK 431
Query: 497 EGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP--HMFSVL 543
P +++ LI C + +A + + EM+ G P HMFS L
Sbjct: 432 GKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 144/295 (48%), Gaps = 12/295 (4%)
Query: 59 RVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVL 118
R++E + +RG NT ++ F G+ ++A +F + + G + + N ++
Sbjct: 139 RMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLD 198
Query: 119 AYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLAL 178
C++KR +A +L L + PN +FN + G+C ++EEA +QEM G
Sbjct: 199 TLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRP 257
Query: 179 DDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLF 238
+YT++I +C + + K +EM +EM G P++ TY ++ SL Q+ EA +
Sbjct: 258 CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVA 317
Query: 239 QEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNA 298
M R G PD+ Y L+ + +A E + + +P+ I+TS TYN+
Sbjct: 318 TRMKRSGCKPDSLFYNCLIHTLARAGRLEEA-----ERVFRVEMPELGVSINTS--TYNS 370
Query: 299 IIHGLCLLDRAEEALEILRGMPEIGL-SPDAVSYSTVI---FGFCRIRELGKAYK 349
+I C D ++A+E+L+ M L +PD +Y ++ F + E+GK K
Sbjct: 371 MIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLK 425
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 7/249 (2%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEM 101
T+N + C+ RVEEAL ++ M +YT++I +C Q + K Y++ +EM
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G P+ TY I+ + K F EAL + + G +P+ + +N L+ G++
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 162 EEAEELLQ-EMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL-PDADTYG 219
EEAE + + EM + G++++ TY S+I ++C+ + +KA E+ EM + PD TY
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 220 PLIGSLCLQQTLSEAFDLFQEML-RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
PL+ S + + E L +EM+ + LS D TYT L+ A+ L +EMI
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 279 KGFLPDFVT 287
+ P T
Sbjct: 466 QDITPRHRT 474
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 18/304 (5%)
Query: 63 ALGILRGMAES------DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAI 116
ALGIL+ AES + Y + + + D+ K F E + ++ T I
Sbjct: 104 ALGILK-WAESCKGHKHSSDAYDMAVDILGKAKKWDR-MKEFVERMRGDKLVTLNTVAKI 161
Query: 117 VLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGL 176
+ + + EA+GI L E G E N S N L+ C + ++E+A +L ++ + +
Sbjct: 162 MRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHI 220
Query: 177 ALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFD 236
+ T+ IH +C +VE+A EM G P +Y +I C Q + ++
Sbjct: 221 TPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYE 280
Query: 237 LFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTY 296
+ EM G P++ TYT +MS+ Q +F +A + M G PD + Y
Sbjct: 281 MLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPD--------SLFY 332
Query: 297 NAIIHGLCLLDRAEEALEILR-GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMD 355
N +IH L R EEA + R MPE+G+S + +Y+++I +C E KA +L EM+
Sbjct: 333 NCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 356 KKSI 359
++
Sbjct: 393 SSNL 396
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 139/379 (36%), Gaps = 51/379 (13%)
Query: 194 GKVEKAFEMK--AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
GK +K MK E + L +T ++ EA +F + GL + +
Sbjct: 132 GKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE 191
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
+ L+ + + +A + L + I+ + T+N IHG C +R EE
Sbjct: 192 SMNLLLDTLCKEKRVEQA---------RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDI 371
AL ++ M G P +SY+T+I +C+ E K Y++ EM+
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG------------- 289
Query: 372 DKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKA 431
+ T++ +MS A+ E+A + + P + Y+ ++ L +
Sbjct: 290 ------SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 432 RITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARA 491
R+ EA+ + + + + T + C ++E + L+K L
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 492 HDRMLEGNYKP---------------------DGAVYNLLIFDHCRCGNVHKAYDMYMEM 530
+ +L +K D + Y LI CR AY ++ EM
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Query: 531 VHYGFAPHMFSVLALIEAL 549
+ P + L L+E +
Sbjct: 464 ISQDITPRHRTCLLLLEEV 482
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 144/295 (48%), Gaps = 12/295 (4%)
Query: 59 RVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVL 118
R++E + +RG NT ++ F G+ ++A +F + + G + + N ++
Sbjct: 139 RMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLD 198
Query: 119 AYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLAL 178
C++KR +A +L L + PN +FN + G+C ++EEA +QEM G
Sbjct: 199 TLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRP 257
Query: 179 DDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLF 238
+YT++I +C + + K +EM +EM G P++ TY ++ SL Q+ EA +
Sbjct: 258 CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVA 317
Query: 239 QEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNA 298
M R G PD+ Y L+ + +A E + + +P+ I+TS TYN+
Sbjct: 318 TRMKRSGCKPDSLFYNCLIHTLARAGRLEEA-----ERVFRVEMPELGVSINTS--TYNS 370
Query: 299 IIHGLCLLDRAEEALEILRGMPEIGL-SPDAVSYSTVI---FGFCRIRELGKAYK 349
+I C D ++A+E+L+ M L +PD +Y ++ F + E+GK K
Sbjct: 371 MIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLK 425
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 7/249 (2%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEM 101
T+N + C+ RVEEAL ++ M +YT++I +C Q + K Y++ +EM
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G P+ TY I+ + K F EAL + + G +P+ + +N L+ G++
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 162 EEAEELLQ-EMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL-PDADTYG 219
EEAE + + EM + G++++ TY S+I ++C+ + +KA E+ EM + PD TY
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 220 PLIGSLCLQQTLSEAFDLFQEML-RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
PL+ S + + E L +EM+ + LS D TYT L+ A+ L +EMI
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 279 KGFLPDFVT 287
+ P T
Sbjct: 466 QDITPRHRT 474
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 18/304 (5%)
Query: 63 ALGILRGMAES------DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAI 116
ALGIL+ AES + Y + + + D+ K F E + ++ T I
Sbjct: 104 ALGILK-WAESCKGHKHSSDAYDMAVDILGKAKKWDR-MKEFVERMRGDKLVTLNTVAKI 161
Query: 117 VLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGL 176
+ + + EA+GI L E G E N S N L+ C + ++E+A +L ++ + +
Sbjct: 162 MRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHI 220
Query: 177 ALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFD 236
+ T+ IH +C +VE+A EM G P +Y +I C Q + ++
Sbjct: 221 TPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYE 280
Query: 237 LFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTY 296
+ EM G P++ TYT +MS+ Q +F +A + M G PD + Y
Sbjct: 281 MLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPD--------SLFY 332
Query: 297 NAIIHGLCLLDRAEEALEILR-GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMD 355
N +IH L R EEA + R MPE+G+S + +Y+++I +C E KA +L EM+
Sbjct: 333 NCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 356 KKSI 359
++
Sbjct: 393 SSNL 396
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 139/379 (36%), Gaps = 51/379 (13%)
Query: 194 GKVEKAFEMK--AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
GK +K MK E + L +T ++ EA +F + GL + +
Sbjct: 132 GKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE 191
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
+ L+ + + +A + L + I+ + T+N IHG C +R EE
Sbjct: 192 SMNLLLDTLCKEKRVEQA---------RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDI 371
AL ++ M G P +SY+T+I +C+ E K Y++ EM+
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG------------- 289
Query: 372 DKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKA 431
+ T++ +MS A+ E+A + + P + Y+ ++ L +
Sbjct: 290 ------SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 432 RITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARA 491
R+ EA+ + + + + T + C ++E + L+K L
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 492 HDRMLEGNYKP---------------------DGAVYNLLIFDHCRCGNVHKAYDMYMEM 530
+ +L +K D + Y LI CR AY ++ EM
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Query: 531 VHYGFAPHMFSVLALIEAL 549
+ P + L L+E +
Sbjct: 464 ISQDITPRHRTCLLLLEEV 482
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 129/277 (46%), Gaps = 11/277 (3%)
Query: 84 LFCDQGQCDKAYKVFAEMIDT---GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
L C G+ A + + + + + P +YNAI+ + K+++ + + ++E G
Sbjct: 190 LICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDG 249
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
F P+++++N L+ GKM+ + L EM + G + D TY L+H+ K A
Sbjct: 250 FSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAAL 309
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
M GI P Y LI L L EM++ G PD YT +++ Y
Sbjct: 310 TTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 369
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
+ + KA + EM KG LP+ TYN++I GLC+ EA +L+ M
Sbjct: 370 VVSGELDKAKEMFREMTVKGQLPNV--------FTYNSMIRGLCMAGEFREACWLLKEME 421
Query: 321 EIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
G +P+ V YST++ + +L +A K+ EM KK
Sbjct: 422 SRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TY L+ G+ D+ ++F EM GFSP TYN ++ + + AL L +
Sbjct: 256 TYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHM 315
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
E G +P+++ + L+ G G +E + L EM + G D YT +I + G++
Sbjct: 316 KEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGEL 375
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+KA EM EM KG LP+ TY +I LC+ EA L +EM RG +P+ Y+ L
Sbjct: 376 DKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTL 435
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKG 280
+S R + S+A + EM+ KG
Sbjct: 436 VSYLRKAGKLSEARKVIREMVKKG 459
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 32/317 (10%)
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
F + S++ L++ F G+ + L+ EM Q G +T+ LI C+ G+ A
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAK 201
Query: 201 EMKAEMVHKGIL---PDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
+ + + P +Y ++ SL + ++++ML G SPD TY L+
Sbjct: 202 QAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILL 261
Query: 258 -SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
+ YRL + + L DEM GF PD TYN ++H L ++ AL L
Sbjct: 262 WTNYRL-GKMDRFDRLFDEMARDGFSPD--------SYTYNILLHILGKGNKPLAALTTL 312
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS--------WLGLWGLY 368
M E+G+ P + Y+T+I G R L EM K + + +
Sbjct: 313 NHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVS 372
Query: 369 DDIDK--------SVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHY 420
++DK +V L + T+++++ G +A L +E+ P V Y
Sbjct: 373 GELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVY 432
Query: 421 SVFLNVLNKKARITEAK 437
S ++ L K +++EA+
Sbjct: 433 STLVSYLRKAGKLSEAR 449
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 114/307 (37%), Gaps = 48/307 (15%)
Query: 182 TYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEM 241
+Y L+ +F G+ + + + EMV G A T+ LI S +A F +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 242 LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT-------------- 287
P +Y ++++ Q+ + +M+ GF PD +T
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 288 -------------GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
G S TYN ++H L ++ AL L M E+G+ P + Y+T+
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 335 IFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLA 394
I G R L EM K G D+ ++ +++ Y+
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKA--------GCRPDV-----------VCYTVMITGYVV 371
Query: 395 EGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTF 454
G L+KA + RE+ LP Y+ + L EA L S C P F
Sbjct: 372 SGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGC--NPNF 429
Query: 455 IIYDTLI 461
++Y TL+
Sbjct: 430 VVYSTLV 436
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 128/326 (39%), Gaps = 53/326 (16%)
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
+Y LM + ++ + L DEM+ GF T+ T+N +I A++
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGF--------PTTARTFNLLICSCGEAGLAKQ 202
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDI 371
A+ P SY+ ++ + K YKL I W+ L D
Sbjct: 203 AVVQFMKSKTFNYRPFKHSYNAILNSLLGV----KQYKL--------IEWVYKQMLEDGF 250
Query: 372 DKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKK- 430
V+ T++ L+ G +++ L E+ + P Y++ L++L K
Sbjct: 251 SPDVL-------TYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGN 303
Query: 431 ---ARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKK 487
A +T H + V + P+ + Y TLI+ G G ++
Sbjct: 304 KPLAALTTLNH-----MKEVGID-PSVLHYTTLID---------------GLSRAGNLEA 342
Query: 488 AARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIE 547
D M++ +PD Y ++I + G + KA +M+ EM G P++F+ ++I
Sbjct: 343 CKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 402
Query: 548 ALCCVRRYNKMSWVIQNT-LRSCNLN 572
LC + + W+++ R CN N
Sbjct: 403 GLCMAGEFREACWLLKEMESRGCNPN 428
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 133/306 (43%), Gaps = 12/306 (3%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
D +Y+ L+ + + ILR + E+ + LI + G DKA VF
Sbjct: 80 DYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVF 139
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
++ ++ + N ++ + +A + PN +SFN L++GF K
Sbjct: 140 HKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDK 199
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
E A ++ EM + + TY SLI C + KA + +M+ K I P+A T+
Sbjct: 200 CDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTF 259
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
G L+ LC + +EA L +M RG P Y LMS + + +A L EM
Sbjct: 260 GLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKK 319
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
+ PD V YN +++ LC R EA +L M G P+A +Y +I GF
Sbjct: 320 RRIKPDV--------VIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
Query: 339 CRIREL 344
CRI +
Sbjct: 372 CRIEDF 377
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 139/298 (46%), Gaps = 12/298 (4%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
+ N L+ +G +E+A G + + ++ LI F D+ + A KVF EM
Sbjct: 153 SLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM 212
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
++ PSV TYN+++ CR+ +A +L +I++ PN ++F L++G C KG+
Sbjct: 213 LEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEY 272
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
EA++L+ +M +G Y L+ +G++++A + EM + I PD Y L
Sbjct: 273 NEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNIL 332
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
+ LC + + EA+ + EM +G P+ TY ++ + F ++ + M+
Sbjct: 333 VNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRH 392
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
P + T+ ++ GL + A +L M + LS + ++ ++ C
Sbjct: 393 CP--------TPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 151/327 (46%), Gaps = 13/327 (3%)
Query: 44 ETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKVFA 99
E+ + L+ + G V++A+ + + D + +LI++ D G+ +KA F
Sbjct: 116 ESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFD 175
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
D P+ ++N ++ + + A + ++E +P+++++N+L+ C
Sbjct: 176 GAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRND 235
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
M +A+ LL++M +K + + T+ L+ C KG+ +A ++ +M ++G P YG
Sbjct: 236 DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 295
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
L+ L + + EA L EM +R + PD Y L++ + + +A+ + EM K
Sbjct: 296 ILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 355
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
G P+ TY +I G C ++ + L +L M P ++ ++ G
Sbjct: 356 GCKPN--------AATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLI 407
Query: 340 RIRELGKAYKLKVEMDKKSISW-LGLW 365
+ L A + M KK++S+ G W
Sbjct: 408 KGGNLDHACFVLEVMGKKNLSFGSGAW 434
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 142/345 (41%), Gaps = 30/345 (8%)
Query: 128 EALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
EAL + E GF + S+++L+ + +++L+ + + + + + LI
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 188 HLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
+ G V+KA ++ ++ + + LI L L +A F L
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 248 PDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLD 307
P++ ++ L+ + + + A + DEM+ P S VTYN++I LC D
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQP--------SVVTYNSLIGFLCRND 235
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGL 367
+A +L M + + P+AV++ ++ G C E +A KL +M+ +
Sbjct: 236 DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCK------- 288
Query: 368 YDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVL 427
GL + + LMSD G +++A LL E+ P V Y++ +N L
Sbjct: 289 ---------PGLVN---YGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 428 NKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKS 471
+ R+ EA L C P Y +I+ C +F S
Sbjct: 337 CTECRVPEAYRVLTEMQMKGC--KPNAATYRMMIDGFCRIEDFDS 379
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 153/391 (39%), Gaps = 50/391 (12%)
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
EEA L + + G D +Y+SLI+ + ++ + ++ + + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I ++ +A D+F ++ ++ L++ + KA D
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRA--EEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
P+ V++N +I G LD+ E A ++ M E+ + P V+Y+++I C
Sbjct: 183 RPN--------SVSFNILIKGF--LDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLC 232
Query: 340 RIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLE 399
R ++GKA L +M KK I + TF LM +G
Sbjct: 233 RNDDMGKAKSLLEDMIKKRIR-------------------PNAVTFGLLMKGLCCKGEYN 273
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
+A L ++ Y P V+Y + ++ L K+ RI EAK LL + ++ P +IY+
Sbjct: 274 EAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKL-LLGEMKKRRIK-PDVVIYNI 331
Query: 460 LIEN-CSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCG 518
L+ + C+ ++ M+G KP+ A Y ++I CR
Sbjct: 332 LVNHLCTECRVPEAYRVLTEMQMKGC----------------KPNAATYRMMIDGFCRIE 375
Query: 519 NVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+ ++ M+ P + + ++ L
Sbjct: 376 DFDSGLNVLNAMLASRHCPTPATFVCMVAGL 406
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 56 RDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVA 111
+ GR++EA +L M + D Y L++ C + + +AY+V EM G P+ A
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 112 TYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM 171
TY ++ +CR + F L +L ++ P +F +V G G ++ A +L+ M
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Query: 172 NQKGLALDDKTYTSLIHLFCNK 193
+K L+ + +L+ C K
Sbjct: 423 GKKNLSFGSGAWQNLLSDLCIK 444
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 38/253 (15%)
Query: 306 LDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLW 365
++ EEAL + E+G D SYS++I+ + R ++ + +++
Sbjct: 59 IEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVR----- 113
Query: 366 GLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLN 425
E F L+ Y G ++KA + +I FD + + +N
Sbjct: 114 --------------CRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLIN 159
Query: 426 VLNKKARITEAKHHLLWFISHVCLRM-PTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGL 484
VL + +AK +F +R+ P + ++ LI KGF +
Sbjct: 160 VLVDNGELEKAKS---FFDGAKDMRLRPNSVSFNILI---------------KGFLDKCD 201
Query: 485 MKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLA 544
+ A + D MLE +P YN LI CR ++ KA + +M+ P+ +
Sbjct: 202 WEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGL 261
Query: 545 LIEALCCVRRYNK 557
L++ LCC YN+
Sbjct: 262 LMKGLCCKGEYNE 274
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 217/537 (40%), Gaps = 62/537 (11%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTS--------LIHLFCDQGQCDKA 94
D +TY L+ C + R+ + R + E NTY S L+ KA
Sbjct: 125 DCSTYMTLI-RCLEEARLYGEM--YRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKA 181
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG--FEPNLISFNALV 152
VF + P+ +TYN+++L ++ + + + + G F P+ I+++AL+
Sbjct: 182 LSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCF-PDTITYSALI 240
Query: 153 QGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL 212
+ G+ + A L EM + +K YT+L+ ++ GKVEKA ++ EM G
Sbjct: 241 SSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS 300
Query: 213 PDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHL 272
P TY LI L + EA+ +++MLR GL+PD LM+ + + ++
Sbjct: 301 PTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNV 360
Query: 273 QDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLD-RAEEALEILRGMPEIGLSPDAVSY 331
EM P + V+YN +I L E M +SP +Y
Sbjct: 361 FSEMGMWRCTP--------TVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTY 412
Query: 332 STVIFGFCRIRELGKAYKLKVEMDKKS-----------ISWLGLWGLYDDIDKSVMQGLS 380
S +I G+C+ + KA L EMD+K I+ LG Y+ ++ +
Sbjct: 413 SILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE--- 469
Query: 381 HEDTFSNLMSDYLAE--GHLEKAYLLEREINYFDYL------PVDVHYSVFLNVLNKKAR 432
++ F N+ S A H K L ++ F+ + P Y+ ++ + K
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 433 ITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAH 492
I EA L + EN + S ++ GF G+ ++A
Sbjct: 530 INEANSLL-----------------RKMEENGCRADINSHNIILNGFARTGVPRRAIEMF 572
Query: 493 DRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+ + KPDG YN L+ G +A M EM GF + ++++A+
Sbjct: 573 ETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 137/302 (45%), Gaps = 14/302 (4%)
Query: 40 GLADETTY-NKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIH-LFCDQGQCDK 93
GL + + N L+ + GRVEE + M +Y ++I LF + +
Sbjct: 333 GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSE 392
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
F +M SPS TY+ ++ YC+ R +AL +L + E+GF P ++ +L+
Sbjct: 393 VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
+ E A EL +E+ + + + Y +I F GK+ +A ++ EM ++G P
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP 512
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
D Y L+ + ++EA L ++M G D ++ +++ + +A +
Sbjct: 513 DVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMF 572
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
+ + H G PD VTYN ++ EEA ++R M + G DA++YS+
Sbjct: 573 ETIKHSGIKPD--------GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSS 624
Query: 334 VI 335
++
Sbjct: 625 IL 626
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 138/336 (41%), Gaps = 44/336 (13%)
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
L+ +L + +S+A +F + R P + TY ++ + Q K + EM ++G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 281 -FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
PD +TY+A+I L R + A+ + M + + P Y+T++ +
Sbjct: 228 DCFPD--------TITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYF 279
Query: 340 RIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLE 399
++ ++ KA L EM + S +Y T++ L+ G ++
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPT----VY---------------TYTELIKGLGKAGRVD 320
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
+AY +++ P V + +N+L K R+ E + C PT + Y+T
Sbjct: 321 EAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC--TPTVVSYNT 378
Query: 460 LIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGN 519
+I+ F + + + + D+M + P Y++LI +C+
Sbjct: 379 VIKAL--------------FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNR 424
Query: 520 VHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRY 555
V KA + EM GF P + +LI AL +RY
Sbjct: 425 VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 118/220 (53%), Gaps = 4/220 (1%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D TY L+ + G ++ A+ + + M E+ D TY+ +I+ G A+++F
Sbjct: 428 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLF 487
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM+ G +P++ T+N ++ + + + + AL + R + GF+P+ ++++ +++
Sbjct: 488 CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 547
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G +EEAE + EM +K D+ Y L+ L+ G V+KA++ M+ G+ P+ T
Sbjct: 548 GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTC 607
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
L+ + +SEA++L Q ML GL P +TYT L+S
Sbjct: 608 NSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 163/373 (43%), Gaps = 23/373 (6%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D +TYT+++ Q + K+ EM+ G P+ TYN ++ +Y R +EA+ +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ E G EP+ +++ L+ G ++ A ++ Q M + GL+ D TY+ +I+
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
G + A + EMV +G P+ T+ +I + A L+++M G PD TY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
+ +M +A + EM K ++PD Y ++ ++A
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPD--------EPVYGLLVDLWGKAGNVDKAW 589
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDK 373
+ + M + GL P+ + ++++ F R+ + +AY L M L L GL+ +
Sbjct: 590 QWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM-------LAL-GLHPSLQT 641
Query: 374 SVMQGLSHEDTFSNLMSDYLAE-----GHLEKAYLLEREINYFDYLPVDVHYSVFLNVLN 428
+ D SN + + GH +LL+ D V H S FL+ ++
Sbjct: 642 YTLLLSCCTDARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMH 701
Query: 429 KKARITEAKHHLL 441
+ R E+K L+
Sbjct: 702 SEDR--ESKRGLM 712
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 119/249 (47%), Gaps = 4/249 (1%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
+ TYN+L+ + R ++EA+ + M E+ D TY +LI + G D A ++
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY 452
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M + G SP TY+ I+ + A + ++ +G PNL++FN ++
Sbjct: 453 QRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKA 512
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
E A +L ++M G D TY+ ++ + + G +E+A + AEM K +PD Y
Sbjct: 513 RNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVY 572
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
G L+ + +A+ +Q ML+ GL P+ T L+S + + S+A++L M+
Sbjct: 573 GLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLA 632
Query: 279 KGFLPDFVT 287
G P T
Sbjct: 633 LGLHPSLQT 641
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 142/337 (42%), Gaps = 47/337 (13%)
Query: 232 SEAFDLFQEMLRR-GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIS 290
+ A F + R+ G D TYT ++ QF + L DEM+ G P+ VT
Sbjct: 340 ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVT--- 396
Query: 291 TSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
YN +IH + +EA+ + M E G PD V+Y T+I KA L
Sbjct: 397 -----YNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI------DIHAKAGFL 445
Query: 351 KVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED-TFSNLMSDYLAEGHLEKAYLLEREIN 409
+ MD +Y + ++ GLS + T+S +++ GHL A+ L E+
Sbjct: 446 DIAMD-----------MYQRMQEA---GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMV 491
Query: 410 YFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEF 469
P V +++ + L+ KAR E L + + + P + Y ++E
Sbjct: 492 GQGCTPNLVTFNIMI-ALHAKARNYETALKLYRDMQNAGFQ-PDKVTYSIVMEV------ 543
Query: 470 KSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYME 529
G G +++A M N+ PD VY LL+ + GNV KA+ Y
Sbjct: 544 ---------LGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQA 594
Query: 530 MVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTL 566
M+ G P++ + +L+ V R ++ ++Q+ L
Sbjct: 595 MLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 141/347 (40%), Gaps = 50/347 (14%)
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFS 267
G D TY ++G+L + E L EM+R G P+ TY L+ +Y
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 268 KAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPD 327
+A ++ ++M G PD VTY +I + A+++ + M E GLSPD
Sbjct: 412 EAMNVFNQMQEAGCEPD--------RVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPD 463
Query: 328 AVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHE-DTFS 386
+YS +I + L A++L EM V QG + TF+
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEM--------------------VGQGCTPNLVTFN 503
Query: 387 NLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISH 446
+++ + + E A L R++ + P V YS+ + VL + EA+
Sbjct: 504 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEG-------- 555
Query: 447 VCLRMPTFIIYDTLIENCSNNEFKSVVGL-VKGFGMRGLMKKAARAHDRMLEGNYKPDGA 505
+ + +N +E V GL V +G G + KA + + ML+ +P+
Sbjct: 556 --------VFAEMQRKNWVPDE--PVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVP 605
Query: 506 VYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCV 552
N L+ R + +AY++ M+ G P + + L+ CC
Sbjct: 606 TCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS--CCT 650
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 139/306 (45%), Gaps = 14/306 (4%)
Query: 40 GLADETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAY 95
G D TYN L+ C + G ++AL + M + T+ +LIH C + +A
Sbjct: 148 GKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEAL 207
Query: 96 KVFAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
K+ +M+ G P+V Y +++ A C+ A + E + + ++ L+
Sbjct: 208 KMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
G+ E +L+EM++KG D TY LI+ FC + E A + EMV KG+ PD
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
+Y ++G + EA LF++M RRG SPD +Y + QF +A + D
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILD 387
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
EM+ KG+ P + LC + E +++ + G++ DA +S +
Sbjct: 388 EMLFKGYKP--------RRDRLEGFLQKLCESGKLEILSKVISSLHR-GIAGDADVWSVM 438
Query: 335 IFGFCR 340
I C+
Sbjct: 439 IPTMCK 444
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 128/270 (47%), Gaps = 11/270 (4%)
Query: 59 RVEEALGILRGMAESDENTYTSLIHLFCDQGQC-DKAYKVFAEMIDTGFSPSVATYNAIV 117
+++E L + + D TY LIH C Q C D A K+F EM+ P+ T+ ++
Sbjct: 136 KMKERLSSIDEFGKPDACTYNILIH-GCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLI 194
Query: 118 LAYCRDKRFREALGILRCLIE-RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGL 176
C+D R +EAL + +++ G P + + +L++ C G++ A +L E + +
Sbjct: 195 HGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKI 254
Query: 177 ALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFD 236
+D Y++LI G+ + + EM KG PD TY LI C++ A
Sbjct: 255 KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANR 314
Query: 237 LFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTY 296
+ EM+ +GL PD +Y ++ + ++ +A +L ++M +G PD ++Y
Sbjct: 315 VLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPD--------TLSY 366
Query: 297 NAIIHGLCLLDRAEEALEILRGMPEIGLSP 326
+ GLC + EEA IL M G P
Sbjct: 367 RIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 138/294 (46%), Gaps = 30/294 (10%)
Query: 142 EPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFE 201
+P+ ++N L+ G G ++A +L EM +K + T+ +LIH C +V++A +
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 202 MKAEMVHK-GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
MK +M+ G+ P Y LI +LC LS AF L E + D Y+ L+S+
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
+ ++ + +EM KG PD VTYN +I+G C+ + +E A +L M
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPD--------TVTYNVLINGFCVENDSESANRVLDEMV 320
Query: 321 EIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLS 380
E GL PD +SY+ ++ F RI++ W L++D+ + +G S
Sbjct: 321 EKGLKPDVISYNMILGVFFRIKK-----------------WEEATYLFEDMPR---RGCS 360
Query: 381 HEDTFSNLMSDYLAEG-HLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARI 433
+ ++ D L EG E+A ++ E+ + Y P FL L + ++
Sbjct: 361 PDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKL 414
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 5/201 (2%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKV 97
D Y+ L+ + + GR E IL M+E D TY LI+ FC + + A +V
Sbjct: 256 VDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRV 315
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
EM++ G P V +YN I+ + R K++ EA + + RG P+ +S+ + G C
Sbjct: 316 LDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCE 375
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+ EEA +L EM KG + C GK+E ++ + + H+GI DAD
Sbjct: 376 GLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDADV 434
Query: 218 YGPLIGSLCLQQTLSEAFDLF 238
+ +I ++C + +S++ DL
Sbjct: 435 WSVMIPTMCKEPVISDSIDLL 455
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 37/273 (13%)
Query: 295 TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
TYN +IHG ++AL++ M + + P V++ T+I G C+ + +A K+K +M
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 355 DKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYL 414
L ++G+ + +++L+ G L A+ L+ E Y +
Sbjct: 214 -------LKVYGVRPTVH-----------IYASLIKALCQIGELSFAFKLKDE-AYEGKI 254
Query: 415 PVDVH-YSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVV 473
VD YS ++ L K R E L C P + Y+ LI
Sbjct: 255 KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGC--KPDTVTYNVLIN----------- 301
Query: 474 GLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHY 533
GF + + A R D M+E KPD YN+++ R +A ++ +M
Sbjct: 302 ----GFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR 357
Query: 534 GFAPHMFSVLALIEALCCVRRYNKMSWVIQNTL 566
G +P S + + LC ++ + + ++ L
Sbjct: 358 GCSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 152/318 (47%), Gaps = 12/318 (3%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQ----GQCDKAYKVFAEM 101
+ N L+ A C DGR+EE ++ + + S I L D G + K+++ M
Sbjct: 824 SINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSM 883
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G+ P++ Y ++ C+ KR R+A ++ + E F+ L +N++++ +
Sbjct: 884 KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
++ ++ Q + + GL D+ TY +LI ++C + E+ + + +M + G+ P DTY L
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I + Q+ L +A LF+E+L +GL D Y +M R SKA L M + G
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
P T + V+Y++ +EA ++L + + + + YS+VI + R
Sbjct: 1064 EPTLAT-MHLLMVSYSSS-------GNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRS 1115
Query: 342 RELGKAYKLKVEMDKKSI 359
++ + +EM K+ +
Sbjct: 1116 KDYNSGIERLLEMKKEGL 1133
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 15/307 (4%)
Query: 41 LADETTYNKLVLACCRDGRVE-----EALGILRGMA-ESDENTYTSLIHLFCDQGQCDKA 94
+ D ++N L+ A + G + E L ++R D TY +L+ D A
Sbjct: 257 VPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGA 316
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
KVF +M P + TYNA++ Y R EA + L +GF P+ +++N+L+
Sbjct: 317 VKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYA 376
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH-KGILP 213
F + E+ +E+ Q+M + G D+ TY ++IH++ +G+++ A ++ +M G P
Sbjct: 377 FARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNP 436
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
DA TY LI SL EA L EML G+ P +TY+ L+ Y + +A
Sbjct: 437 DAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
M+ G PD ++ Y+ ++ L + +A + R M G +P Y
Sbjct: 497 SCMLRSGTKPD--------NLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYEL 548
Query: 334 VIFGFCR 340
+I G +
Sbjct: 549 MILGLMK 555
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 176/435 (40%), Gaps = 80/435 (18%)
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK--AFEMKAE 205
+NA++ + GK +A+EL+ M Q+G D ++ +LI+ G + A E+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQ 265
+ + G+ PDA TY L+ + L A +F++M PD TY ++S Y
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 266 FSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLS 325
++A L E+ KGF PD VTYN++++ E+ E+ + M ++G
Sbjct: 348 AAEAERLFMELELKGFFPD--------AVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 326 PDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTF 385
D ++Y+T+I + GK +L + + LY D M+GLS +
Sbjct: 400 KDEMTYNTIIHMY------GKQGQLDLALQ-----------LYKD-----MKGLSGRN-- 435
Query: 386 SNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFIS 445
P + Y+V ++ L K R EA L+ +
Sbjct: 436 -----------------------------PDAITYTVLIDSLGKANRTVEAAA-LMSEML 465
Query: 446 HVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGA 505
V ++ PT Y LI C G+ G ++A ML KPD
Sbjct: 466 DVGIK-PTLQTYSALI--C-------------GYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 506 VYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNT 565
Y++++ R KA+ +Y +M+ G P +I L R + + I++
Sbjct: 510 AYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Query: 566 LRSCNLNDSELLQVL 580
C +N E+ VL
Sbjct: 570 EELCGMNPLEISSVL 584
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 137/323 (42%), Gaps = 13/323 (4%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGIL-----RGMAESDENTYTSLIHLFCDQGQCDKAYK 96
A E+ +V+ C+ G E A ++ +G + YT +I + Q KA
Sbjct: 714 ASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAES 773
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
V + +G +P + T+N+++ AY + + A I ++ G P + S N L+ C
Sbjct: 774 VVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALC 833
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
G++EE +++E+ G + + ++ F G + + ++ + M G LP
Sbjct: 834 VDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIR 893
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
Y +I LC + + +A + EM + + ++ Y + K + +
Sbjct: 894 LYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRI 953
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
G PD TYN +I C R EE +++ M +GL P +Y ++I
Sbjct: 954 KETGLEPD--------ETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Query: 337 GFCRIRELGKAYKLKVEMDKKSI 359
F + + L +A +L E+ K +
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKGL 1028
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 124/282 (43%), Gaps = 12/282 (4%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAESDENT----YTSLIHLFCDQGQCDKAYKVFAEMI 102
Y ++ C+ RV +A ++ M E++ + S++ ++ K +V+ +
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+TG P TYN +++ YCRD+R E +++ + G +P L ++ +L+ F + +E
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
+AE+L +E+ KGL LD Y +++ + + G KA ++ M + GI P T L+
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
S EA + + + Y+ ++ AY ++ EM +G
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGL 324
PD H + + E + +L+ + +IG
Sbjct: 1135 PD--------HRIWTCFVRAASFSKEKIEVMLLLKALEDIGF 1168
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/305 (18%), Positives = 129/305 (42%), Gaps = 28/305 (9%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
Y +L+H +A +VF+++ +G S + ++V+ YC+ A ++
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 138 ERGFEPNLIS-FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+GF + +++ + + ++AE ++ + Q G D KT+ SL+ + G
Sbjct: 744 TKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCY 803
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
E+A + M+ G P ++ L+ +LC+ L E + + +E+ G + +
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDF----------------------VTGISTSH- 293
+ A+ + + M G+LP V+ + ++
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 294 ----VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
+N+++ ++ ++ +++ + + E GL PD +Y+T+I +CR R + Y
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 350 LKVEM 354
L +M
Sbjct: 984 LMQQM 988
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 114/584 (19%), Positives = 217/584 (37%), Gaps = 69/584 (11%)
Query: 46 TYNKLVLACCRDGRVEEALG----ILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TY+ L+ + G+ EEA +LR + D Y+ ++ + + KA+ ++ +M
Sbjct: 475 TYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER-GFEPNLISFNALVQGFCGKGK 160
I G +PS Y ++L ++ R + +R + E G P IS + LV+G C
Sbjct: 535 ISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEIS-SVLVKGEC---- 589
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+ A L+ G L++ T S++ + + G+ +AFE+ +
Sbjct: 590 FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEA 649
Query: 221 LIGSLCLQQTLSEAFD-LFQEMLRRGLSPDNKT-YTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI C LS A D F + G + T Y L+ +++A + ++
Sbjct: 650 LIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDL-- 707
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGL----SPDAVSYSTV 334
++G S +++ C L E A +++ G SP Y+ +
Sbjct: 708 ------RLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDI 758
Query: 335 IFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED--TFSNLMSDY 392
I + + + LW + + ++ Q D T+++LMS Y
Sbjct: 759 IEAYGKQK---------------------LWQKAESVVGNLRQSGRTPDLKTWNSLMSAY 797
Query: 393 LAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMP 452
G E+A + + P ++ L+ L R+ E
Sbjct: 798 AQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEE----------------- 840
Query: 453 TFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIF 512
+++ + L + S++ ++ F G + + + + M Y P +Y ++I
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 513 DHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLN 572
C+ V A M EM F + ++++ + Y K V Q +
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEP 960
Query: 573 DSELLQVLNEIDVREGQTEYLRGELAERAMDGLLLDGRKGSYAS 616
D L + R+ + E G L + M L LD + +Y S
Sbjct: 961 DETTYNTLIIMYCRDRRPE--EGYLLMQQMRNLGLDPKLDTYKS 1002
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 13/300 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVF 98
+E Y ++ R+G +++ L + M + +YT+LI+ + G+ + + ++
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREAL-GILRCLIERGFEPNLISFNALVQGFCG 157
M + SPS+ TYN ++ A R E L G+ + G +P+++++N L+
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+G +EAE + + MN G+ D TY+ L+ F ++EK ++ EM G LPD +
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
Y L+ + ++ EA +F +M G +P+ TY+ L++ + ++ L EM
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
PD TYN +I +E + + M E + PD +Y +IF
Sbjct: 380 SSNTDPD--------AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYK 96
L D T+YN L+ A + G ++EA+G+ M + + NTY+ L++LF G+ D +
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+F EM + P ATYN ++ + F+E + + ++E EP++ ++ ++ C
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA-C 432
Query: 157 GKGKM-EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
GKG + E+A ++LQ M + K YT +I F E+A M G P
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
+T+ L+ S + E+ + ++ G+ + T+ + AY+ +F +A +
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552
Query: 276 MIHKGFLPD 284
M PD
Sbjct: 553 MEKSRCDPD 561
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 180/477 (37%), Gaps = 82/477 (17%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
+E+ YT +I L +G DK +VF EM G S SV
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSV----------------------- 176
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
S+ AL+ + G+ E + ELL M + ++ TY ++I+ C +
Sbjct: 177 ------------FSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CAR 223
Query: 194 GKV--EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
G + E + AEM H+GI PD TY L+ + ++ EA +F+ M G+ PD
Sbjct: 224 GGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLT 283
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
TY+ L+ + + K L EM G LPD +YN ++ +E
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI--------TSYNVLLEAYAKSGSIKE 335
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDI 371
A+ + M G +P+A +YS ++ F G G YDD+
Sbjct: 336 AMGVFHQMQAAGCTPNANTYSVLLNLF------------------------GQSGRYDDV 371
Query: 372 DKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKA 431
+ ++ S + L E E Y E + D + ++ +
Sbjct: 372 RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM--------- 422
Query: 432 RITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARA 491
E +++ L I + N K+ G+++ FG L ++A A
Sbjct: 423 ---ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVA 479
Query: 492 HDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
+ M E P ++ L++ R G V ++ + +V G + + A IEA
Sbjct: 480 FNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEA 536
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 174/446 (39%), Gaps = 49/446 (10%)
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMN-QKGLALDDKTYTSLIHLF 190
I RCL + +L F + + F G+G + + L + M Q ++ YT +I L
Sbjct: 92 IARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLL 151
Query: 191 CNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDN 250
+G ++K E+ EM +G+ +Y LI + + +L M +SP
Sbjct: 152 GREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSI 211
Query: 251 KTYTGLMSA-YRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRA 309
TY +++A R + L EM H+G PD VTYN ++ +
Sbjct: 212 LTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDI--------VTYNTLLSACAIRGLG 263
Query: 310 EEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYD 369
+EA + R M + G+ PD +YS ++ F ++R L K L EM G
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASG--------GSLP 315
Query: 370 DIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNK 429
DI +++ L+ Y G +++A + ++ P YSV LN+ +
Sbjct: 316 DI-----------TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 430 KARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAA 489
R + + L S P Y+ LIE FG G K+
Sbjct: 365 SGRYDDVRQLFLEMKSSNT--DPDAATYNILIEV---------------FGEGGYFKEVV 407
Query: 490 RAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHK-AYDMYMEMVHYGFAPHMFSVLALIEA 548
M+E N +PD Y +IF C G +H+ A + M P + +IEA
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIF-ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEA 466
Query: 549 LCCVRRYNKMSWVIQNTLRSCNLNDS 574
Y + + V NT+ N S
Sbjct: 467 FGQAALYEE-ALVAFNTMHEVGSNPS 491
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 143/333 (42%), Gaps = 14/333 (4%)
Query: 30 WTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGM---AESDENTYTSLIHLFC 86
+ + ++ K + +N L+ A C+ G V+E +LR M + D NT+ L +C
Sbjct: 220 FAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWC 279
Query: 87 DQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFE---P 143
KA K+ EMI+ G P TY A + +C+ EA + +I +G P
Sbjct: 280 RVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAP 339
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
+F ++ K EE EL+ M G D TY +I C KV++A++
Sbjct: 340 TAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFL 399
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQ 263
EM +KG PD TY + LC + EA L+ M+ +P +TY L+S +
Sbjct: 400 DEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEM 459
Query: 264 AQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIG 323
AF+ EM + + D TY A+I+GL RA+EA +L + G
Sbjct: 460 DDPDGAFNTWTEMDKRDCVQDV--------ETYCAMINGLFDCHRAKEACFLLEEVVNKG 511
Query: 324 LSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDK 356
L + + + + L +K+ M K
Sbjct: 512 LKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKK 544
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 12/259 (4%)
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
I P + +N ++ A C+ +E +LR + R +P+ +FN L G+C
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDP 284
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL---PDADTY 218
++A +LL+EM + G ++ TY + I FC G V++A ++ M+ KG P A T+
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
+I +L E F+L M+ G PD TY ++ + + +A+ DEM +
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
KG+ PD VT YN + LC + +EAL++ M E +P +Y+ +I F
Sbjct: 405 KGYPPDIVT--------YNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMF 456
Query: 339 CRIRELGKAYKLKVEMDKK 357
+ + A+ EMDK+
Sbjct: 457 FEMDDPDGAFNTWTEMDKR 475
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 99/192 (51%)
Query: 89 GQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISF 148
G+ D+ Y++ EM+ GFSP + TYN ++ + AL +L + E G EP +I F
Sbjct: 271 GKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHF 330
Query: 149 NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH 208
L+ G GK+E + + E + G D YT +I + + G++EKA EM EM
Sbjct: 331 TTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTE 390
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSK 268
KG LP+ TY +I C+ EA L +EM RG +P+ Y+ L++ + + +
Sbjct: 391 KGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLE 450
Query: 269 AFHLQDEMIHKG 280
A + +M+ KG
Sbjct: 451 AHEVVKDMVEKG 462
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 11/255 (4%)
Query: 84 LFCDQGQCDKAYKVFAEMIDT---GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
L C G+ A V + I + + P +YNAI+ + K+++ + ++E G
Sbjct: 193 LICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDG 252
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
F P+++++N ++ GK + LL EM + G + D TY L+H K A
Sbjct: 253 FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
+ M G+ P + LI L L E ++ G +PD YT +++ Y
Sbjct: 313 NLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGY 372
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
+ KA + EM KG LP+ T YN++I G C+ + +EA +L+ M
Sbjct: 373 ISGGELEKAEEMFKEMTEKGQLPNVFT--------YNSMIRGFCMAGKFKEACALLKEME 424
Query: 321 EIGLSPDAVSYSTVI 335
G +P+ V YST++
Sbjct: 425 SRGCNPNFVVYSTLV 439
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 43/270 (15%)
Query: 295 TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
+YNAI+H L + + + + M E G +PD ++Y+ V+F R+ + + Y+L
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL---- 279
Query: 355 DKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYL-LEREINYFDY 413
+D+ V G S + N++ +LA G+ A L L +
Sbjct: 280 ----------------LDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGV 323
Query: 414 LPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNE---- 468
P +H++ ++ L++ ++ K+ + + C P + Y +I S E
Sbjct: 324 EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGC--TPDVVCYTVMITGYISGGELEKA 381
Query: 469 ---FKSVV------------GLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFD 513
FK + +++GF M G K+A M P+ VY+ L+ +
Sbjct: 382 EEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNN 441
Query: 514 HCRCGNVHKAYDMYMEMVHYGFAPHMFSVL 543
G V +A+++ +MV G H+ S L
Sbjct: 442 LKNAGKVLEAHEVVKDMVEKGHYVHLISKL 471
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/523 (22%), Positives = 209/523 (39%), Gaps = 97/523 (18%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
DE + L+ + + G V+E++ I + M E +Y SL + +G+ A + F
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+M+ G P+ TYN ++ + R AL + RG P+ +FN ++ GFC
Sbjct: 244 NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRF 303
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
KM+EAE+L EM + +YT++I + +V+ + EM GI P+A TY
Sbjct: 304 KKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTY 363
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSP-DNKTYTGLMSAYRLQAQFSKA-------- 269
L+ LC + EA ++ + M+ + ++P DN + L+ + + A
Sbjct: 364 STLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMA 423
Query: 270 -FHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDA 328
++ E H G L + S YN I LLD E ILR + + P A
Sbjct: 424 TLNVPAEAGHYGVLIENQCKASA----YNRAIK---LLDTLIEKEIILRHQDTLEMEPSA 476
Query: 329 VSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNL 388
Y+ +I C + KA L ++ K+ G+ +D +NL
Sbjct: 477 --YNPIIEYLCNNGQTAKAEVLFRQLMKR--------------------GVQDQDALNNL 514
Query: 389 MSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVC 448
+ + EG+ + +Y + L +++++ E+ + L
Sbjct: 515 IRGHAKEGNPDSSYEI-------------------LKIMSRRGVPRESNAYEL------- 548
Query: 449 LRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYN 508
L+K + +G A A D M+E + PD +++
Sbjct: 549 --------------------------LIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFR 582
Query: 509 LLIFDHCRCGNVHKAYDMYMEMV--HYGFAPHMFSVLALIEAL 549
+I G V A + M M+ + G +M + ++EAL
Sbjct: 583 SVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEAL 625
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 152/368 (41%), Gaps = 44/368 (11%)
Query: 157 GKGKMEEAEELLQEMNQKGLALDDK-TYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
G K+E A + + + GL D+ T+ +I + K+ A + +M KG+ D
Sbjct: 126 GAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDE 185
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
D + LI S + E+ +FQ+M G+ K+Y L + ++ A ++
Sbjct: 186 DMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNK 245
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
M+ +G P T H TYN ++ G L R E AL M G+SPD +++T+I
Sbjct: 246 MVSEGVEP-------TRH-TYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMI 297
Query: 336 FGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAE 395
GFCR +++ +A KL VEM + I SV+ +++ ++ YLA
Sbjct: 298 NGFCRFKKMDEAEKLFVEMKG------------NKIGPSVV-------SYTTMIKGYLAV 338
Query: 396 GHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFI 455
++ + E+ P YS L L ++ EAK+ I
Sbjct: 339 DRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKN----------------I 382
Query: 456 IYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHC 515
+ + + ++ + + + L+ G M A M N + Y +LI + C
Sbjct: 383 LKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQC 442
Query: 516 RCGNVHKA 523
+ ++A
Sbjct: 443 KASAYNRA 450
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 141/325 (43%), Gaps = 49/325 (15%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKV 97
D+ T + V + C GRV+EA +++ + E D TY L+ C Y+
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 98 FAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
EM D P + ++ ++ C K REA+ ++ L GF+P+ +N +++GFC
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
K EA + ++M ++G+ D TY +LI G+VE+A MV G PD
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTA 336
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
TY L+ +C + A L +EM RG +P++ TY
Sbjct: 337 TYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTY----------------------- 373
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
N ++HGLC ++ +E+ M G+ ++ Y+T++
Sbjct: 374 --------------------NTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVR 413
Query: 337 GFCRIRELGKAYKL-KVEMDKKSIS 360
+ ++ +AY++ +D KS+S
Sbjct: 414 SLVKSGKVAEAYEVFDYAVDSKSLS 438
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 4/224 (1%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKV 97
D ++ L+ C + EA+ ++ + + D Y +++ FC + +A V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
+ +M + G P TYN ++ + R EA L+ +++ G+EP+ ++ +L+ G C
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
KG+ A LL+EM +G A +D TY +L+H C ++K E+ M G+ +++
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNG 407
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYR 261
Y L+ SL ++EA+++F + D Y+ L + +
Sbjct: 408 YATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLK 451
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 156/338 (46%), Gaps = 16/338 (4%)
Query: 25 GFAAAWTETEKTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYT 79
G A+ T + G+ D TTYN L+ ++ + L + M S D +Y
Sbjct: 63 GIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYN 122
Query: 80 SLIHLFCDQGQCDKAYKVFAEMID-TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
+L+ + G+ +A+K+ E I G P + TYN ++ A C+ A+ + + L
Sbjct: 123 TLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS 182
Query: 139 RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK 198
R +P L+++N L+ G C ++ + +++E+ + G + TYT+++ ++ ++EK
Sbjct: 183 R-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEK 241
Query: 199 AFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL-SPDNKTYTGLM 257
++ +M +G D ++ +L EA++ E++R G S D +Y L+
Sbjct: 242 GLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLL 301
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
+ Y L +E+ KG PD T+ I++GL + A + L
Sbjct: 302 NLYFKDGNLDAVDDLLEEIEMKGLKPD--------DYTHTIIVNGLLNIGNTGGAEKHLA 353
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMD 355
+ E+G+ P V+ + +I G C+ + +A +L M+
Sbjct: 354 CIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME 391
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 145/340 (42%), Gaps = 50/340 (14%)
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
N V C +E AE LL + + G+ D TY +LI + +++A+ + M
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFS 267
GI PD TY LI L+ LF EML GLSPD +Y LMS Y +
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 268 KAFHLQDEMIHKGFLPDFVTGISTSHV------------------------------TYN 297
+AF + E IH L V GI T ++ TYN
Sbjct: 136 EAFKILHEDIH---LAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYN 192
Query: 298 AIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
+I+GLC R ++R + + G +P+AV+Y+T++ + + + + K +L ++M K+
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 358 SISWLGLWGL---------------YDDIDKSVMQGLSHED--TFSNLMSDYLAEGHLEK 400
++ G Y+ + + V G +D +++ L++ Y +G+L+
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 401 AYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHL 440
L EI P D +++ +N L A+ HL
Sbjct: 313 VDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 16/274 (5%)
Query: 64 LGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRD 123
LG+L D TY +LI + D+AY V M + G P V TYN+++ ++
Sbjct: 42 LGVL-----PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKN 96
Query: 124 KRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQE-MNQKGLALDDKT 182
L + ++ G P++ S+N L+ + G+ EA ++L E ++ GL T
Sbjct: 97 LMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDT 156
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
Y L+ C G + A E+ + + + P+ TY LI LC + + + +E+
Sbjct: 157 YNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELK 215
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
+ G +P+ TYT ++ Y + K L +M +G+ D G + A++
Sbjct: 216 KSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFD---GFANC-----AVVSA 267
Query: 303 LCLLDRAEEALEILRGMPEIGL-SPDAVSYSTVI 335
L RAEEA E + + G S D VSY+T++
Sbjct: 268 LIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLL 301
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 9/217 (4%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN L+ C+ RV ++R + +S + TYT+++ ++ + +K ++F +M
Sbjct: 190 TYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP-NLISFNALVQGFCGKGK 160
G++ A+V A + R EA + L+ G +++S+N L+ + G
Sbjct: 250 KKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN 309
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
++ ++LL+E+ KGL DD T+T +++ N G A + A + G+ P T
Sbjct: 310 LDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNC 369
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
LI LC + A LF M R D TYT ++
Sbjct: 370 LIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVV 402
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 127/302 (42%), Gaps = 19/302 (6%)
Query: 46 TYNKLVLACCRDGRVEEALGI---LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
TYN L+ A C+ G + A+ + L+ + + TY LI+ C + + E+
Sbjct: 156 TYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELK 215
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+G++P+ TY ++ Y + KR + L + + + G+ + + A+V G+ E
Sbjct: 216 KSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAE 275
Query: 163 EAEELLQEMNQKGL-ALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
EA E + E+ + G + D +Y +L++L+ G ++ ++ E+ KG+ PD T+ +
Sbjct: 276 EAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTII 335
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
+ L A + G+ P T L+ +A L
Sbjct: 336 VNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL--------- 386
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
F + TY +++H LC R A ++L G+ + + V+ G I
Sbjct: 387 ---FASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSG---I 440
Query: 342 RE 343
RE
Sbjct: 441 RE 442
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 109/526 (20%), Positives = 228/526 (43%), Gaps = 55/526 (10%)
Query: 41 LADETTYNKLVLAC--CRD---GRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAY 95
L D+ + K++ C C D G+V ++ I GM+ S S++ ++ G+ D A
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMS-SCLRVSNSILAVYAKCGELDFAT 236
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
K F M + V +N+++LAYC++ + EA+ +++ + + G P L+++N L+ G+
Sbjct: 237 KFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
GK + A +L+Q+M G+ D T+T++I + G +A +M +M G++P+A
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
T + + + +++ ++ ++ G D L+ Y + A + D
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS 412
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
+ +K T+N++I G C +A E+ M + L P+ ++++T+I
Sbjct: 413 VKNKDVY------------TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI 460
Query: 336 FGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAE 395
G+ + + G+A L M+K D V + + T++ +++ Y+
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEK---------------DGKVQRNTA---TWNLIIAGYIQN 502
Query: 396 GHLEKAYLLEREINYFDYLPVDVHYSVFL----NVLNKKA----------RITEAKHHLL 441
G ++A L R++ + ++P V L N+L K R +A H +
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK 562
Query: 442 WFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYK 501
++ + T+ + + L+ G+ + G A ++M
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGIT 622
Query: 502 PDGAVYNLLIFDHCRCGNVHKAYDMYMEMVH-YGFAPHMFSVLALI 546
P+ + +I H GNV + ++ + + Y P + A++
Sbjct: 623 PNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMV 668
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 125/561 (22%), Positives = 233/561 (41%), Gaps = 74/561 (13%)
Query: 45 TTYNKLVLACCRDGRVEEALG-ILRG----MAESDENTYTSLIHLFCDQGQCDKAYKVFA 99
+TY KL+ +C G + LG IL E D T L+ ++ G A KVF
Sbjct: 82 STYLKLLESCIDSGSIH--LGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
M + ++ T++A++ AY R+ R+RE + R +++ G P+ F ++QG G
Sbjct: 140 SMRER----NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCG 195
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+E + + + + G++ + S++ ++ G+++ A + M + ++ +
Sbjct: 196 DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVI----AWN 251
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
++ + C EA +L +EM + G+SP T+ L+ Y + A L +M
Sbjct: 252 SVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM--- 308
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
GI+ T+ A+I GL +AL++ R M G+ P+AV+ + + C
Sbjct: 309 -----ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA-C 362
Query: 340 R----IRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAE 395
I + + + + V+M G DD V+ G S D +S
Sbjct: 363 SCLKVINQGSEVHSIAVKM-----------GFIDD----VLVGNSLVDMYSKC------- 400
Query: 396 GHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFI 455
G LE A + + D + + + +A + L + LR P I
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMITGYC-----QAGYCGKAYELFTRMQDANLR-PNII 454
Query: 456 IYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRM-LEGNYKPDGAVYNLLIFDH 514
++T+I G+ G +A RM +G + + A +NL+I +
Sbjct: 455 TWNTMIS---------------GYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGY 499
Query: 515 CRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDS 574
+ G +A +++ +M F P+ ++L+L+ A C KM I + NL+
Sbjct: 500 IQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA-CANLLGAKMVREIHGCVLRRNLDAI 558
Query: 575 ELLQ-VLNEIDVREGQTEYLR 594
++ L + + G EY R
Sbjct: 559 HAVKNALTDTYAKSGDIEYSR 579
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 18/315 (5%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHL---FCDQGQCDKAY 95
D TY+ L+ + ++G + AL L+ M + D Y++LI L CD KA
Sbjct: 189 DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYS---KAI 245
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
+F+ + +G +P + YN+++ Y + K FREA +++ + E G PN +S++ L+ +
Sbjct: 246 SIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVY 305
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
K EA + EM + ALD T +I ++ V++A + + I P+
Sbjct: 306 VENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNV 365
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
+Y ++ + EA LF+ M R+ + + TY ++ Y + KA +L E
Sbjct: 366 VSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQE 425
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
M +G P+ +T + T +I LDRA + LR G+ D V Y T+I
Sbjct: 426 MQSRGIEPNAIT-----YSTIISIWGKAGKLDRAATLFQKLRSS---GVEIDQVLYQTMI 477
Query: 336 FGFCRIRELGKAYKL 350
+ R+ +G A +L
Sbjct: 478 VAYERVGLMGHAKRL 492
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 146/334 (43%), Gaps = 27/334 (8%)
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+ ++PSV YN ++ R K+F A G+ + +R P+ +++ L+ F +G +
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
A LQ+M Q ++ D Y++LI L KA + + + GI PD Y +I
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
+ EA L +EM G+ P+ +Y+ L+S Y +F +A + EM
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR 342
D T N +I LD +EA + + ++ + P+ VSY+T++ +
Sbjct: 328 LDLTTC--------NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE 379
Query: 343 ELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAY 402
G+A L M +K DI+++V+ T++ ++ Y EKA
Sbjct: 380 LFGEAIHLFRLMQRK------------DIEQNVV-------TYNTMIKIYGKTMEHEKAT 420
Query: 403 LLEREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
L +E+ P + YS +++ K ++ A
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 205/495 (41%), Gaps = 58/495 (11%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
YN ++ R + + A G+ M + D TY++LI F +G D A +M
Sbjct: 158 YNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKME 217
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM- 161
S + Y+ ++ R + +A+ I L G P+L+++N+++ + GK K+
Sbjct: 218 QDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY-GKAKLF 276
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
EA L++EMN+ G+ + +Y++L+ ++ K +A + AEM D T +
Sbjct: 277 REARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIM 336
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I + EA LF + + + P+ +Y ++ Y F +A HL M K
Sbjct: 337 IDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD- 395
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
I + VTYN +I E+A +++ M G+ P+A++YST+I +
Sbjct: 396 -------IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW--- 445
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
GKA KL D+ + + L +ID+ + Q ++ Y G + A
Sbjct: 446 ---GKAGKL----DRAATLFQKLRSSGVEIDQVLYQ---------TMIVAYERVGLMGHA 489
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHV--CLRMPTFIIYDT 459
L E+ LP ++ + +L K R EA W + ++
Sbjct: 490 KRLLHELK----LPDNIPRETAITILAKAGRTEEAT----WVFRQAFESGEVKDISVFGC 541
Query: 460 LIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGN 519
+I S N+ V +++ F ++M Y PD V +++ + +
Sbjct: 542 MINLYSRNQ--RYVNVIEVF-------------EKMRTAGYFPDSNVIAMVLNAYGKQRE 586
Query: 520 VHKAYDMYMEMVHYG 534
KA +Y EM G
Sbjct: 587 FEKADTVYREMQEEG 601
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 9/230 (3%)
Query: 62 EALGILRGMAESD--EN--TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIV 117
EA+ + R M D +N TY ++I ++ + +KA + EM G P+ TY+ I+
Sbjct: 383 EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTII 442
Query: 118 LAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLA 177
+ + + A + + L G E + + + ++ + G M A+ LL E+
Sbjct: 443 SIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLP--- 499
Query: 178 LDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDL 237
D+ + I + G+ E+A + + G + D +G +I Q ++
Sbjct: 500 -DNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEV 558
Query: 238 FQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG-FLPDFV 286
F++M G PD+ +++AY Q +F KA + EM +G PD V
Sbjct: 559 FEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEV 608
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 99/226 (43%), Gaps = 8/226 (3%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
TYN ++ + E+A +++ M E + TY+++I ++ G+ D+A +F +
Sbjct: 401 VTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQK 460
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
+ +G Y +++AY R +G + L+ P+ I + G+
Sbjct: 461 LRSSGVEIDQVLYQTMIVAYERVG----LMGHAKRLLHELKLPDNIPRETAITILAKAGR 516
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
EEA + ++ + G D + +I+L+ + E+ +M G PD++
Sbjct: 517 TEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAM 576
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF 266
++ + Q+ +A +++EM G ++ + ++S Y + F
Sbjct: 577 VLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDF 622
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/531 (21%), Positives = 211/531 (39%), Gaps = 96/531 (18%)
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
EM D GF T ++ YC + AL + ++ RG+ IS LV FC G
Sbjct: 204 EMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWG 262
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
++++A EL++ + ++ + L+ KTY LIH F + +++KAF++ +M G+ D Y
Sbjct: 263 QVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYD 322
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH-------- 271
LIG LC + L A L+ E+ R G+ PD L+ ++ +++ S+
Sbjct: 323 VLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDK 382
Query: 272 --------------LQDEMIHKGF---------------------LPDFVTGISTSHVTY 296
++++++H+ + L D I +
Sbjct: 383 KSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSL 442
Query: 297 NAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDK 356
+ +I+ L ++ + A+ +L + + GL P + Y+ +I G C+ ++ KL EM
Sbjct: 443 SIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKD 502
Query: 357 KSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAE-GHLEKAYLLEREINYFDYLP 415
G+ N + LAE A L +++ ++ + P
Sbjct: 503 --------------------AGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEP 542
Query: 416 VDVHYSVFLNVLNKKARITEAKHHL-----LWFISHVCLRMPTFIIYDTLIEN------- 463
H + + L + R +A +L F+ H+ + + D LI+N
Sbjct: 543 WIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHM---VASTAAIDGLIKNEGVDRGL 599
Query: 464 ------CSNNEFKSVVG---LVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDH 514
C+N V+ L+K +A + M+ KP A YN +I
Sbjct: 600 ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW 659
Query: 515 CRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC-------CVRRYNKM 558
C+ G + + + M P + + +LI LC + R+N+M
Sbjct: 660 CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEM 710
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 140/323 (43%), Gaps = 12/323 (3%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYK 96
L D + + ++ + +V+ A+ +L + ++ Y ++I C +G+ +++ K
Sbjct: 436 LPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLK 495
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+ EM D G PS T N I F AL +L+ + GFEP + LV+ C
Sbjct: 496 LLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLC 555
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
G+ +A + L ++ +G T+ I V++ E+ ++ G PD
Sbjct: 556 ENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVI 615
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
Y LI +LC EA LF EM+ +GL P TY ++ + + + + M
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
PD +TY ++IHGLC R EA+ M P+ +++ +I
Sbjct: 676 YEDEKNPDV--------ITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQ 727
Query: 337 GFCRIRELGKAYKLKVEMDKKSI 359
G C+ G+A EM++K +
Sbjct: 728 GLCKCGWSGEALVYFREMEEKEM 750
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 16/248 (6%)
Query: 45 TTYNKLVLACCRDGRVEEAL---------GILRGMAESDENTYTSLIHLFCDQGQCDKAY 95
TT+ LV C +GR +A G L M S T+ I D+
Sbjct: 547 TTF--LVKKLCENGRAVDACKYLDDVAGEGFLGHMVAS-----TAAIDGLIKNEGVDRGL 599
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
++F ++ G P V Y+ ++ A C+ R EA + ++ +G +P + ++N+++ G+
Sbjct: 600 ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW 659
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
C +G+++ + M + D TYTSLIH C G+ +A EM K P+
Sbjct: 660 CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR 719
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
T+ LI LC EA F+EM + + PD+ Y L+S++ + F + E
Sbjct: 720 ITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFRE 779
Query: 276 MIHKGFLP 283
M+HKG P
Sbjct: 780 MVHKGRFP 787
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 146/324 (45%), Gaps = 18/324 (5%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQG--QCDKA 94
L + T+ +++ R G A+ + M + +T+ LI + C++ ++A
Sbjct: 710 LITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEA 769
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
+ F EMI +GF P + C ++A L L + GF P ++++ ++
Sbjct: 770 TRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRA 828
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
C GK+EEA L + LD TY S++H +G ++KA + M G P
Sbjct: 829 LCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPG 888
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
Y LI ++ L + + Q+M P TYT ++ Y + +A++
Sbjct: 889 VHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFR 948
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
M +G PDF T Y+ I+ LC ++E+AL++L M + G++P +++ TV
Sbjct: 949 NMEERGTSPDFKT--------YSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTV 1000
Query: 335 IFGFCRIRELGKAYKLKVEMDKKS 358
+G R GK ++ + KKS
Sbjct: 1001 FYGLNR---EGKHDLARIALQKKS 1021
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 124/292 (42%), Gaps = 19/292 (6%)
Query: 75 ENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDK--RFREALGI 132
++T+ +I + G + A + F EM D G PS +T+ ++ C K EA
Sbjct: 713 QDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRT 772
Query: 133 LRCLIERGFEPNLISFNALVQGF----CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
R +I GF P+ LVQ + C G ++A+ L + + G + Y+ I
Sbjct: 773 FREMIRSGFVPD----RELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVT-VAYSIYIR 827
Query: 189 LFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
C GK+E+A A + L D TYG ++ L + L +A D M G P
Sbjct: 828 ALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKP 887
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDR 308
YT L+ + + Q K +M + P S VTY A+I G L +
Sbjct: 888 GVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEP--------SVVTYTAMICGYMSLGK 939
Query: 309 AEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
EEA R M E G SPD +YS I C+ + A KL EM K I+
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIA 991
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 163/363 (44%), Gaps = 29/363 (7%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
+ D T+T LI ++ + K VF +M +GF YN ++ + C R AL
Sbjct: 221 DKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALE 280
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+ ++E+G L ++ L+ K++ + + +M + + + L+ FC
Sbjct: 281 FYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFC 340
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
GK+++A E+ E+ +K + DA + L+ LC + +A ++ M RR L D+
Sbjct: 341 VSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSN 399
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
Y ++S Y Q SKA Q E+I K P V+ TY I+ L L + E+
Sbjct: 400 VYGIIISGYLRQNDVSKALE-QFEVIKKSGRPPRVS-------TYTEIMQHLFKLKQFEK 451
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI--SW-------- 361
+ M E G+ PD+V+ + V+ G + +A+K+ M++K I +W
Sbjct: 452 GCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVK 511
Query: 362 -LGLWGLYDDIDKSVMQG-----LSHEDTFSNLMSDYLAEGHLEKAYLL----EREINYF 411
L YD+I K Q + +D FS ++S G EK +L+ +R +Y
Sbjct: 512 ELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYC 571
Query: 412 DYL 414
D L
Sbjct: 572 DEL 574
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Query: 40 GLADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAY 95
G Y+ + A CR G++EEAL L D+ TY S++H +G KA
Sbjct: 815 GFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKAL 874
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
M + G P V Y ++++ + ++K+ + L + + EP+++++ A++ G+
Sbjct: 875 DKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGY 934
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
GK+EEA + M ++G + D KTY+ I+ C K E A ++ +EM+ KGI P
Sbjct: 935 MSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 143/330 (43%), Gaps = 32/330 (9%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE---SDENTYTSLIHLFCDQGQCDKAYKVFA 99
D + LV CR R+ +AL I+ M D N Y +I + Q KA + F
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFE 422
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
+ +G P V+TY I+ + K+F + + +IE G EP+ ++ A+V G G+
Sbjct: 423 VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQN 482
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
++ EA ++ M +KG+ K+Y+ + C + ++ ++ +M I+ D +
Sbjct: 483 RVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFS 542
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLS-PDNKTYTGLMSAYRLQAQFSKAFHLQD---- 274
+I S+ + E L +E+ +R S D +G +A+FS+ L D
Sbjct: 543 WVISSM-EKNGEKEKIHLIKEIQKRSNSYCDELNGSG-------KAEFSQEEELVDDYNC 594
Query: 275 -EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
+++ + LP ++ + V +E +L + + +A+ ST
Sbjct: 595 PQLVQQSALPPALSAVDKMDV---------------QEICRVLSSSRDWERTQEALEKST 639
Query: 334 VIFGFCRIRELGKAYKLKVEMDKKSISWLG 363
V F + E+ + K++ + SW+G
Sbjct: 640 VQFTPELVVEVLRHAKIQGNAVLRFFSWVG 669
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 114/530 (21%), Positives = 217/530 (40%), Gaps = 102/530 (19%)
Query: 89 GQCDKAYKVFAEMIDTGFSPSVATYNAIV-----LAYCRDK----RFREALGILRCLIER 139
G+ +KA KV E +D FSP V ++V L D+ FR I+ +++R
Sbjct: 107 GEDEKAQKVLHEEVD--FSPVVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKR 164
Query: 140 GFE-PNLIS--FNALVQ--GF-------------CGKGK-MEEAEELLQEMNQKGLALDD 180
F+ P+L FN + Q GF G+ + ++ +EL+ EM + G D
Sbjct: 165 CFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDI 224
Query: 181 KTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQE 240
+T+T LI ++ K+ K + +M G DA Y +I SLC+ A + ++E
Sbjct: 225 RTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKE 284
Query: 241 MLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAII 300
M+ +G++ +TY L+ + + D+M+ + IS H + ++
Sbjct: 285 MMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVR-------ICEIS-EHDAFGYLL 336
Query: 301 HGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
C+ + +EALE++R + + DA + ++ G CR + A ++ M ++ +
Sbjct: 337 KSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD 396
Query: 361 WLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHY 420
++G+ ++S YL + + KA L + E+ P V
Sbjct: 397 DSNVYGI--------------------IISGYLRQNDVSKA-LEQFEVIKKSGRPPRV-- 433
Query: 421 SVFLNVLNKKARITEAKHHLLWFISHVCLRMPTF----IIYDTLIENCSNNEFKSVVGLV 476
+ TE HL ++ F +++ +IEN + ++ +V
Sbjct: 434 ----------STYTEIMQHL--------FKLKQFEKGCNLFNEMIENGIEPDSVAITAVV 475
Query: 477 KGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFA 536
G + + +A + M E KP Y++ + + CR YD +++ + A
Sbjct: 476 AGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSR----YDEIIKIFNQMHA 531
Query: 537 PHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLNEIDVR 586
+ V R + SWVI + ++ + E + ++ EI R
Sbjct: 532 SKI------------VIRDDIFSWVISSMEKN---GEKEKIHLIKEIQKR 566
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 39 KGLADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKA 94
+ L D+ TY +V + G +++AL + M E + YTSLI F + Q +K
Sbjct: 849 RSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKV 908
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
+ +M PSV TY A++ Y + EA R + ERG P+ +++ +
Sbjct: 909 LETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
C K E+A +LL EM KG+A + ++ + +GK
Sbjct: 969 LCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 113/544 (20%), Positives = 198/544 (36%), Gaps = 134/544 (24%)
Query: 7 LFKTFLRNRVPPPDVMIRGFAA----------AWTETEKTNWKGLADE-TTYNKLVLACC 55
LF + N + P V I A AW KG+ +Y+ V C
Sbjct: 455 LFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELC 514
Query: 56 RDGRVEEALGILRGMAES----------------DENTYTSLIHL----------FCDQ- 88
R R +E + I M S ++N IHL +CD+
Sbjct: 515 RSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCDEL 574
Query: 89 -GQCDKAYKVFAEMIDTGFSPSVATYNAI-----------------VLAYCRD-KRFREA 129
G + E++D P + +A+ VL+ RD +R +EA
Sbjct: 575 NGSGKAEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEA 634
Query: 130 L------------------------GILRCLI----ERGFEPNLISFNALVQ-GFCGKGK 160
L +LR G++ N ++N ++ CGK
Sbjct: 635 LEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKD- 693
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
++ L EM ++G + T+ +I + G A EM G++P + T+
Sbjct: 694 FKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKC 753
Query: 221 LIGSLCLQQ--TLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
LI LC ++ + EA F+EM+R G PD + + A D +
Sbjct: 754 LITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGK 813
Query: 279 KGF------------------LPDFVTGIST--------SHVTYNAIIHGLCLLDRAEEA 312
GF L + ++ +++ TY +I+HGL ++A
Sbjct: 814 IGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKA 873
Query: 313 LEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDID 372
L+ + M EIG P Y+++I F + ++L K + +M+ +S +
Sbjct: 874 LDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGES------------CE 921
Query: 373 KSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKAR 432
SV+ T++ ++ Y++ G +E+A+ R + P YS F+N L + +
Sbjct: 922 PSVV-------TYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACK 974
Query: 433 ITEA 436
+A
Sbjct: 975 SEDA 978
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 40/280 (14%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D Y LV CR G + EA + + M E + TY+ +I C GQ +A+ VF
Sbjct: 254 DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVF 313
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
A+M+D+G +P+ T+N ++ + + R + L + + + G EP+ I++N L++ C
Sbjct: 314 ADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRD 373
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTS--------------------------------- 185
+E A ++L M +K ++ T+ +
Sbjct: 374 ENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTY 433
Query: 186 --LIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
L+ +F + +MK EM K + P+ +TY L+ C + A+ LF+EM+
Sbjct: 434 NILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVE 493
Query: 244 -RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
+ L+P Y +++ R Q K L ++MI KG +
Sbjct: 494 EKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLV 533
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 152/350 (43%), Gaps = 19/350 (5%)
Query: 21 VMIRGFAAAWTETEKT-------NWKGLADETTYNKLVLACCRDGRVEEALGI---LRGM 70
++IR + A +E ++ + D+ ++ ++ R R EA L+
Sbjct: 191 ILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR 250
Query: 71 AESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREAL 130
E D YT+L+ +C G+ +A KVF EM G P+V TY+ ++ A CR + A
Sbjct: 251 FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAH 310
Query: 131 GILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLF 190
+ +++ G PN I+FN L++ G+ E+ ++ +M + G D TY LI
Sbjct: 311 DVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAH 370
Query: 191 CNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDN 250
C +E A ++ M+ K +A T+ + + ++ ++ A ++ +M+ P+
Sbjct: 371 CRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430
Query: 251 KTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAE 310
TY LM + ++ EM K P+ TY ++ C +
Sbjct: 431 VTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNV--------NTYRLLVTMFCGMGHWN 482
Query: 311 EALEILRGM-PEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
A ++ + M E L+P Y V+ R +L K +L +M +K +
Sbjct: 483 NAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 9/277 (3%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
Y +I L Q D A+ + M S+ T+ ++ Y R EA+ +
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
+ G P+ I+F+ ++ K + EA+ + + D YT+L+ +C G++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
+A ++ EM GI P+ TY +I +LC +S A D+F +ML G +P+ T+ LM
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
+ + K + ++M G PD +TYN +I C + E A+++L
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDT--------ITYNFLIEAHCRDENLENAVKVLN 384
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
M + +A +++T+ + R++ A+++ +M
Sbjct: 385 TMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKM 421
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 28/221 (12%)
Query: 164 AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIG 223
A L+ M + + + +T+T LI + G +A M G +PD + +I
Sbjct: 170 AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS 229
Query: 224 SLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
+L ++ SEA F + L+ PD YT L+ + + S+A + EM G P
Sbjct: 230 NLSRKRRASEAQSFF-DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 284 DFVT---------------------------GISTSHVTYNAIIHGLCLLDRAEEALEIL 316
+ T G + + +T+N ++ R E+ L++
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVY 348
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
M ++G PD ++Y+ +I CR L A K+ M KK
Sbjct: 349 NQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 383 DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLW 442
+TF+ L+ Y+ G +A + + +P + +S+ ++ L++K R +EA+ +
Sbjct: 187 ETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQS---F 243
Query: 443 FISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKP 502
F S P I+Y LV+G+ G + +A + M +P
Sbjct: 244 FDSLKDRFEPDVIVY---------------TNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 503 DGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFS 541
+ Y+++I CRCG + +A+D++ +M+ G AP+ +
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 45/267 (16%)
Query: 265 QFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGL 324
QF A+HL D M + + S T+ +I A EA+ M + G
Sbjct: 166 QFDLAWHLIDLMKSRN--------VEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGC 217
Query: 325 SPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDT 384
PD +++S VI R R +A L D + V+
Sbjct: 218 VPDKIAFSIVISNLSRKRRASEAQSF-------------FDSLKDRFEPDVI-------V 257
Query: 385 FSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFI 444
++NL+ + G + +A + +E+ P YS+ ++ L + +I+ A
Sbjct: 258 YTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD------ 311
Query: 445 SHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDG 504
+ D L C+ N + L++ G +K + +++M + +PD
Sbjct: 312 ----------VFADMLDSGCAPNAI-TFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDT 360
Query: 505 AVYNLLIFDHCRCGNVHKAYDMYMEMV 531
YN LI HCR N+ A + M+
Sbjct: 361 ITYNFLIEAHCRDENLENAVKVLNTMI 387
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 12/238 (5%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER- 139
++ L+ G + A+K+F EM + +V ++NA++ AY K+ EA+ + L E+
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 140 GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKA 199
G P+L+++N +++ C KG M++ + +E+ + G D ++ +L+ F + +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 200 FEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
+ M K + P+ +Y + L + ++A +L M G+SPD TY L++A
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 260 YRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCL---LDRAEEALE 314
YR+ + +EM KG PD VTY +I LC LDRA E E
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPD--------TVTYCMLIPLLCKKGDLDRAVEVSE 357
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 9/243 (3%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRC 135
++ +L+ + + + D+A K F E+ + G +P + TYN ++ A CR + L I
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 136 LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
L + GFEP+LISFN L++ F + E + + M K L+ + ++Y S + K
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
A + M +GI PD TY LI + + L E + EM +GL+PD TY
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
L+ + +A + +E I L + Y ++ L + +EA ++
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLL--------SRPNMYKPVVERLMGAGKIDEATQL 390
Query: 316 LRG 318
++
Sbjct: 391 VKN 393
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 4/201 (1%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TYN ++ A CR G +++ L I + E D ++ +L+ F + + +++
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M SP++ +YN+ V R+K+F +AL ++ + G P++ ++NAL+ +
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
+EE + EM +KGL D TY LI L C KG +++A E+ E + +L + Y
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMY 371
Query: 219 GPLIGSLCLQQTLSEAFDLFQ 239
P++ L + EA L +
Sbjct: 372 KPVVERLMGAGKIDEATQLVK 392
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 17/267 (6%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES-----DENTYTSLIHLFCDQGQCDKAYKVFAE 100
++N L+ A +++EA+ + + E D TY ++I C +G D +F E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
+ GF P + ++N ++ + R + F E I + + PN+ S+N+ V+G K
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+A L+ M +G++ D TY +LI + +E+ + EM KG+ PD TY
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG----LMSAYRLQ--AQFSKAFHLQD 274
LI LC + L A ++ +E ++ L Y LM A ++ Q K LQ
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGKLQS 398
Query: 275 EMIHKGFLPDFVTG---ISTSHVTYNA 298
+ +LPD G ++S V+ +A
Sbjct: 399 ---YFRYLPDLSAGKKKTTSSPVSSSA 422
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 25/275 (9%)
Query: 142 EPNLISFNALVQGFCGKGKMEEAEELLQEMNQK-GLALDDKTYTSLIHLFCNKGKVEKAF 200
E + SFNAL+ + K++EA + +E+ +K G+ D TY ++I C KG ++
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDIL 213
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
+ E+ G PD ++ L+ ++ E ++ M + LSP+ ++Y +
Sbjct: 214 SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGL 273
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
+F+ A +L D M +G PD H TYNA+I + + EE ++ M
Sbjct: 274 TRNKKFTDALNLIDVMKTEGISPDV-------H-TYNALITAYRVDNNLEEVMKCYNEMK 325
Query: 321 EIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLS 380
E GL+PD V+Y +I C+ +L +A ++ E K + L +Y + + +M G
Sbjct: 326 EKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL--LSRPNMYKPVVERLM-GAG 382
Query: 381 HEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLP 415
D + L+ + G L+ +YF YLP
Sbjct: 383 KIDEATQLVKN----GKLQ---------SYFRYLP 404
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 147/318 (46%), Gaps = 16/318 (5%)
Query: 43 DETTYNKLVLACCRDGRVEEALGIL------RGMAESDENTYTSLIHLFCDQGQCDKAYK 96
+E T ++ C++GR++E + +L R + NT SL+ ++ + +++
Sbjct: 233 NEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNT--SLVFRVLEEMRIEESMS 290
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+ ++ Y+ +V A ++ A + +++RGF N + V+ C
Sbjct: 291 LLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCC 350
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
KG ++EAE LL EM + G++ D+T+ LI F G EK E MV +G++P
Sbjct: 351 EKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCS 410
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
+ ++ S+ + ++ A ++ + + +G PD TY+ L+ + +A L EM
Sbjct: 411 AFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEM 470
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
++ P F + ++I GLC + E + L+ M + + P+A Y +I
Sbjct: 471 EYRKMSPGF--------EVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIK 522
Query: 337 GFCRIRELGKAYKLKVEM 354
F +I + A ++ EM
Sbjct: 523 AFQKIGDKTNADRVYNEM 540
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 131/284 (46%), Gaps = 8/284 (2%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
T +LIH D ++++ ID P+ T ++ C++ R +E + +L +
Sbjct: 201 TLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRI 260
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+ P++I +LV + ++EE+ LL+ + K + +D Y+ +++ +G +
Sbjct: 261 CGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDL 320
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
A ++ EM+ +G ++ Y + C + + EA L EM G+SP ++T+ L
Sbjct: 321 VSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCL 380
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
+ + K + M+ +G +P S +N ++ + ++ A EIL
Sbjct: 381 IGGFARFGWEEKGLEYCEVMVTRGLMP--------SCSAFNEMVKSVSKIENVNRANEIL 432
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
+ G PD +YS +I GF ++ +A KL EM+ + +S
Sbjct: 433 TKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMS 476
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 113/241 (46%), Gaps = 4/241 (1%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYK 96
+ D Y+ +V A ++G + A + M + ++ YT + + C++G +A +
Sbjct: 301 VVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAER 360
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+ +EM ++G SP T+N ++ + R + L ++ RG P+ +FN +V+
Sbjct: 361 LLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVS 420
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+ A E+L + KG D+ TY+ LI F +++A ++ EM ++ + P +
Sbjct: 421 KIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFE 480
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
+ LI LC + + M +R + P+ Y L+ A++ + A + +EM
Sbjct: 481 VFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Query: 277 I 277
I
Sbjct: 541 I 541
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 137/322 (42%), Gaps = 27/322 (8%)
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
+ VF + D GF+ SV T N ++ + K I C I++ PN I+ ++Q
Sbjct: 183 GFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQ 242
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
C +G+++E +LL + K TSL+ + ++E++ + ++ K ++
Sbjct: 243 VLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVV 302
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
D Y ++ + + L A +F EML+RG S ++ YT + + +A L
Sbjct: 303 DTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLL 362
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
EM +G+S T+N +I G E+ LE M GL P +++
Sbjct: 363 SEMEE--------SGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNE 414
Query: 334 VIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYL 393
++ +I + +A ++ L IDK + E T+S+L+ ++
Sbjct: 415 MVKSVSKIENVNRANEI----------------LTKSIDKGF---VPDEHTYSHLIRGFI 455
Query: 394 AEGHLEKAYLLEREINYFDYLP 415
+++A L E+ Y P
Sbjct: 456 EGNDIDQALKLFYEMEYRKMSP 477
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 11/256 (4%)
Query: 106 FSPSVATYNAIVLAYCRDKRFREALGILRCLI---ERGFEPNLISFNALVQGFCGKGKME 162
F+P Y ++ Y ++ R + +L + +R P+ +++ +V F G M+
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH-KGILPDADTYGPL 221
A ++L EM + G+ + TY L+ +C + ++++A ++ EM GI PD +Y +
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I L + A F EM RG++P +YT LM A+ + Q A + DEM++
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMND-- 587
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
+ + +N ++ G C L E+A ++ M E G P+ +Y ++ G +
Sbjct: 588 -----PRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQA 642
Query: 342 RELGKAYKLKVEMDKK 357
R+ G A L E+ ++
Sbjct: 643 RKPGDALLLWKEIKER 658
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
DE TY +V A G ++ A +L MA ++ TY L+ +C Q Q D+A +
Sbjct: 451 DEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLL 510
Query: 99 AEMI-DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
EM D G P V +YN I+ AL + RG P IS+ L++ F
Sbjct: 511 REMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAM 570
Query: 158 KGKMEEAEELLQE-MNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
G+ + A + E MN + +D + L+ +C G +E A + + M G P+
Sbjct: 571 SGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVA 630
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRR 244
TYG L + + +A L++E+ R
Sbjct: 631 TYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 140/338 (41%), Gaps = 54/338 (15%)
Query: 67 LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRF 126
L G + D + ++++ + G DK +K+F EM + P V TYN ++ R R
Sbjct: 228 LVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRK 287
Query: 127 REALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGL---------- 176
+ +L +I++G + + + ++LV + G G + AE ++Q M +K
Sbjct: 288 ELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECN 347
Query: 177 ----------------------------ALDDKTYTSLIHLFCNKGKVEKAFEMKAE--M 206
A D+ + ++ +F K + + + E +
Sbjct: 348 AEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVF--KKLLPNSVDPSGEPPL 405
Query: 207 VHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR---RGLSPDNKTYTGLMSAYRLQ 263
+ K PD+ Y L+ +++ + + M R R PD TYT ++SA+
Sbjct: 406 LPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNA 465
Query: 264 AQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPE-I 322
+A + EM G+ + +TYN ++ G C + + A ++LR M E
Sbjct: 466 GLMDRARQVLAEMAR--------MGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDA 517
Query: 323 GLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
G+ PD VSY+ +I G I + A EM + I+
Sbjct: 518 GIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIA 555
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 210/509 (41%), Gaps = 60/509 (11%)
Query: 49 KLVLACCRDGRVEEALGILR---GMAESD--ENTYTSLIHLFCDQGQCDKAYKVFAEMID 103
+L C G + EA+G+L GM N Y SL + FC +G +A +F M
Sbjct: 206 RLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEV 265
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEE 163
G+ Y ++ YC+D A+ + ++ER FE + FN L+ GF G +++
Sbjct: 266 DGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDK 325
Query: 164 AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV-HKGILPDADTYGPLI 222
+ +M +KG+ + TY +I +C +G V+ A + + I + Y LI
Sbjct: 326 GRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLI 385
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
+ + +A DL ML G+ PD+ TY + L K L+ M+ +
Sbjct: 386 FGFYKKGGMDKAVDLLMRMLDNGIVPDHITY------FVLLKMLPKCHELKYAMVILQSI 439
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEAL--EILRGMPEIGLSPDAVSYSTVIFGFCR 340
D GI+ +I L ++ E+L EI R + AV + V C
Sbjct: 440 LDNGCGINP------PVIDDLGNIEVKVESLLGEIARKDANLA----AVGLAVVTTALCS 489
Query: 341 IRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEK 400
R Y + +K ++ LG L + SV++ L E+ +L S
Sbjct: 490 QRN----YIAALSRIEKMVN-LGCTPLPFSYN-SVIKCLFQENIIEDLAS---------- 533
Query: 401 AYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTL 460
L I D++P Y + +N L KK +A ++ + + LR PT IY ++
Sbjct: 534 ---LVNIIQELDFVPDVDTYLIVVNELCKKND-RDAAFAIIDAMEELGLR-PTVAIYSSI 588
Query: 461 IENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNV 520
I + G +G + +A +MLE +PD Y ++I + R G +
Sbjct: 589 IGS---------------LGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 521 HKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
+A ++ E+V + P F+ LI
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGF 662
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 192/480 (40%), Gaps = 85/480 (17%)
Query: 24 RGFAAAWTETEK-TNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTY 78
R + AA + EK N +YN ++ ++ +E+ ++ + E D +TY
Sbjct: 491 RNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTY 550
Query: 79 TSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
+++ C + D A+ + M + G P+VA Y++I+ + + R EA ++E
Sbjct: 551 LIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLE 610
Query: 139 RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK 198
G +P+ I++ ++ + G+++EA EL++E+ + L TYT LI F G +EK
Sbjct: 611 SGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEK 670
Query: 199 AFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
+ +M+ G+ P+ Y LIG + +F LF M + D+ Y L+S
Sbjct: 671 GCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLS 730
Query: 259 A-YRLQAQFSK--------AFHLQDEMIH----------------KGFLPDFVTGISTSH 293
+R A+ K L +I K F + + + S
Sbjct: 731 GLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSI 790
Query: 294 VT----YNAIIHGLCLLDRAEEALEILRGMPEIGL------------------------- 324
+ +N II G C R +EA L M + G+
Sbjct: 791 IPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAID 850
Query: 325 -------SPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQ 377
PD V YST++ G C + A L +EM K I+
Sbjct: 851 LFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGIN----------------- 893
Query: 378 GLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAK 437
++D++ L+ +A + +++ D P ++++ + +L ++ ++ EA+
Sbjct: 894 --PNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREAR 951
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 163/388 (42%), Gaps = 33/388 (8%)
Query: 59 RVEEALG-ILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIV 117
+VE LG I R A + C Q A +M++ G +P +YN+++
Sbjct: 460 KVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVI 519
Query: 118 LAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLA 177
++ + ++ + E F P++ ++ +V C K + A ++ M + GL
Sbjct: 520 KCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLR 579
Query: 178 LDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDL 237
Y+S+I +G+V +A E A+M+ GI PD Y +I + + EA +L
Sbjct: 580 PTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANEL 639
Query: 238 FQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYN 297
+E+++ L P + TYT L+S + K D+M+ G P+ V Y
Sbjct: 640 VEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNV--------VLYT 691
Query: 298 AIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
A+I + + + M E + D ++Y T++ G R K ++ VE K+
Sbjct: 692 ALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKE 751
Query: 358 SI--------------SWLGLWG-------LYDDIDKSVMQGLSHEDTFSNLMSDYLAEG 396
+ S LG +G + + KS++ L +T +++ Y A G
Sbjct: 752 KLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNT---IITGYCAAG 808
Query: 397 HLEKAYLLEREINYFDYLPVDVHYSVFL 424
L++AY + +P V Y++ +
Sbjct: 809 RLDEAYNHLESMQKEGIVPNLVTYTILM 836
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 108/541 (19%), Positives = 209/541 (38%), Gaps = 91/541 (16%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESDE-----NTYTSLIHLFCDQGQCDKAYKVFAE 100
TY+ ++ + C++G V+ AL + S++ + YT+LI F +G DKA +
Sbjct: 344 TYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMR 403
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER--GFEPNLI------------ 146
M+D G P TY ++ + + A+ IL+ +++ G P +I
Sbjct: 404 MLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVES 463
Query: 147 ---------------SFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+ C + A +++M G +Y S+I
Sbjct: 464 LLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLF 523
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
+ +E + + +PD DTY ++ LC + AF + M GL P
Sbjct: 524 QENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVA 583
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
Y+ ++ + Q + +A +M+ G PD + Y +I+ R +E
Sbjct: 584 IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPD--------EIAYMIMINTYARNGRIDE 635
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDI 371
A E++ + + L P + +Y+ +I GF +K+ M +K +L
Sbjct: 636 ANELVEEVVKHFLRPSSFTYTVLISGF-----------VKMGMMEKGCQYL--------- 675
Query: 372 DKSVMQGLSHEDT-FSNLMSDYLAEGHLEKAYLL-----EREINYFDYLPVDVHYSVFLN 425
DK + GLS ++ L+ +L +G + ++ L E +I + + + ++
Sbjct: 676 DKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRA 735
Query: 426 VLNKKAR---ITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFK-SVVGLVK---- 477
+ KK R + K LL + +R + + + N + F V+G VK
Sbjct: 736 MARKKKRQVIVEPGKEKLLQRL----IRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSII 791
Query: 478 -----------GFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDM 526
G+ G + +A + M + P+ Y +L+ H G++ A D+
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 527 Y 527
+
Sbjct: 852 F 852
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 10/283 (3%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D + S++ + D+A +I +G++PS + + +V C RF EA
Sbjct: 130 DSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCF 189
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM-NQKGLALDDKTYTSLIHLFCN 192
+ ERG L L +G CG G + EA +L + + L Y SL + FC
Sbjct: 190 EQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCK 249
Query: 193 KGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKT 252
+G +A + M G D Y L+ C ++ A L+ M+ R D
Sbjct: 250 RGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCI 309
Query: 253 YTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEA 312
+ L+ + K + +MI K G+ ++ TY+ +I C + A
Sbjct: 310 FNTLIHGFMKLGMLDKGRVMFSQMIKK--------GVQSNVFTYHIMIGSYCKEGNVDYA 361
Query: 313 LEI-LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
L + + +S + Y+ +IFGF + + KA L + M
Sbjct: 362 LRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRM 404
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEEL 167
P++ +N I+ YC R EA L + + G PNL+++ L++ G +E A +L
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 168 LQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCL 227
+ N + D Y++L+ C+ + A + EM GI P+ D+Y L+ LC
Sbjct: 852 FEGTNCEP---DQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCY 908
Query: 228 QQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
+ EA + ++M + P + +T L+ + + +A L M+ G
Sbjct: 909 SRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 3/205 (1%)
Query: 62 EALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYC 121
E +G ++ + + ++I +C G+ D+AY M G P++ TY ++ ++
Sbjct: 781 EVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHI 840
Query: 122 RDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDK 181
A+ + EP+ + ++ L++G C + +A L+ EM + G+ +
Sbjct: 841 EAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKD 897
Query: 182 TYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEM 241
+Y L+ C +A ++ +M I P + + LI LC ++ L EA LF M
Sbjct: 898 SYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIM 957
Query: 242 LRRGLSPDNKTYTGLMSAYRLQAQF 266
++ G S N T GL+ Q
Sbjct: 958 VQSGRSLLNCTKPGLLKMLNQNQQL 982
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 9/262 (3%)
Query: 75 ENTYTSLIHLFCD-QGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
E + +L+ ++ + G+ ++A ++ M D G PS ++N I+ K F E I
Sbjct: 131 EEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIF 190
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ G E + N L++G C G +E A +LL E Q+ + T++ LI FCNK
Sbjct: 191 VSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNK 250
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
GK E+AF++ M + I PD T+ LI L + + E DL + M +G P+ TY
Sbjct: 251 GKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTY 310
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
++ + + +A + +MI G P F ++Y ++ GLC E
Sbjct: 311 QEVLYGLLDKKRNLEAKEMMSQMISWGMRPSF--------LSYKKMVLGLCETKSVVEMD 362
Query: 314 EILRGMPEIGLSPDAVSYSTVI 335
+LR M G P + + V+
Sbjct: 363 WVLRQMVNHGFVPKTLMWWKVV 384
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 4/247 (1%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYK 96
++E YN + + GR+ A+ IL GM + ++ +++L D+ +K
Sbjct: 129 FSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHK 188
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+F G N ++ C AL +L ++ PN+++F+ L++GFC
Sbjct: 189 IFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFC 248
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
KGK EEA +LL+ M ++ + D T+ LI KG+VE+ ++ M KG P+
Sbjct: 249 NKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPG 308
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
TY ++ L ++ EA ++ +M+ G+ P +Y ++ + + +M
Sbjct: 309 TYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQM 368
Query: 277 IHKGFLP 283
++ GF+P
Sbjct: 369 VNHGFVP 375
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKV 97
D T+N L+ + GRVEE + +L M E + TY +++ D+ + +A ++
Sbjct: 270 PDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEM 329
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
++MI G PS +Y +VL C K E +LR ++ GF P + + +VQ
Sbjct: 330 MSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVS 389
Query: 158 KG 159
K
Sbjct: 390 KN 391
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 106/256 (41%), Gaps = 37/256 (14%)
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
YG L G + + A ++ M G P +K++ +++ F DE I
Sbjct: 141 YGNLAGRI------NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLF-------DE-I 186
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
HK F+ G+ N +I GLC E AL++L P+ P+ +++S +I G
Sbjct: 187 HKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRG 246
Query: 338 FCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGH 397
FC + +A+KL M+K+ I D I TF+ L+S +G
Sbjct: 247 FCNKGKFEEAFKLLERMEKERIE-------PDTI------------TFNILISGLRKKGR 287
Query: 398 LEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIY 457
+E+ L + P Y L L K R EAK + IS +R P+F+ Y
Sbjct: 288 VEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW-GMR-PSFLSY 345
Query: 458 DTLIENCSNNEFKSVV 473
++ E KSVV
Sbjct: 346 KKMVLGLC--ETKSVV 359
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 13/268 (4%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDT--GFSPSVATYNAIVLAYCR--DKRFREALGIL 133
+ S++ + + K+F ++ + F P +T+ ++ CR D +L
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
++ G EP+ ++ + V+ C G+++EA++L++E+ +K D TY L+ C
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207
Query: 194 GKVEKAFEMKAEMVHK-GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKT 252
+ +E EM + PD ++ LI ++C + L EA L ++ G PD
Sbjct: 208 KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267
Query: 253 YTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEA 312
Y +M + ++ S+A + +M +G PD +TYN +I GL R EEA
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD--------QITYNTLIFGLSKAGRVEEA 319
Query: 313 LEILRGMPEIGLSPDAVSYSTVIFGFCR 340
L+ M + G PD +Y++++ G CR
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKV 97
D+ T + V + C GRV+EA +++ + E D TY L+ C Y+
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 98 FAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
EM D P + ++ ++ C K REA+ ++ L GF+P+ +N +++GFC
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
K EA + ++M ++G+ D TY +LI G+VE+A MV G PD
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTA 336
Query: 217 TYGPLIGSLC 226
TY L+ +C
Sbjct: 337 TYTSLMNGMC 346
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 7/222 (3%)
Query: 45 TTYNKLVLACCR--DGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
+T+ L+ CR D + +L M E D+ T + C+ G+ D+A +
Sbjct: 123 STFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLM 182
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER-GFEPNLISFNALVQGFCG 157
E+ + P TYN ++ C+ K + + + +P+L+SF L+ C
Sbjct: 183 KELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCN 242
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+ EA L+ ++ G D Y +++ FC K +A + +M +G+ PD T
Sbjct: 243 SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT 302
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
Y LI L + EA + M+ G PD TYT LM+
Sbjct: 303 YNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNG 344
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 11/215 (5%)
Query: 149 NALVQGFCGKGKMEEAEELLQEM--NQKGLALDDKTYTSLIHLFCN--KGKVEKAFEMKA 204
N+++Q + + + +L Q + +Q T+ L+ C + +
Sbjct: 89 NSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLN 148
Query: 205 EMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQA 264
MV+ G+ PD T + SLC + EA DL +E+ + PD TY L+
Sbjct: 149 LMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 265 QFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGL 324
+ DEM DF + V++ +I +C EA+ ++ + G
Sbjct: 209 DLHVVYEFVDEMRD-----DF--DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF 261
Query: 325 SPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
PD Y+T++ GFC + + +A + +M ++ +
Sbjct: 262 KPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 120/265 (45%), Gaps = 22/265 (8%)
Query: 33 TEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQ 88
+ + N K + + L+ +G V+EAL M E D Y ++I+ C
Sbjct: 154 SRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRV 213
Query: 89 GQCDKAYKVFAEMIDTGF--SPSVATYNAIVLAYCR-----------DKRFREALGILRC 135
G KA + +M GF P TY ++ +YCR +R EA + R
Sbjct: 214 GNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFRE 273
Query: 136 LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
++ RGF P+++++N L+ G C ++ A EL ++M KG + TY S I + +
Sbjct: 274 MLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNE 333
Query: 196 VEKAFEMKAEMVHKGI-LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYT 254
+E A EM M G +P + TY PLI +L + +EA DL EM+ GL P TY
Sbjct: 334 IEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYK 393
Query: 255 GLMSAYRLQAQFSKAFHLQDEMIHK 279
+ A + S DE +HK
Sbjct: 394 LVCDALSSEGLASTL----DEELHK 414
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 127 REALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGL--ALDDKTYT 184
+EAL + E +P++ ++N ++ C G ++A LL +M G D TYT
Sbjct: 182 KEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 185 SLIHLFCNKG-----------KVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSE 233
LI +C G ++ +A M EM+ +G +PD TY LI C +
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 234 AFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSH 293
A +LF++M +G P+ TY + Y + + A + M G G+ S
Sbjct: 302 ALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGH------GVPGSS 355
Query: 294 VTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
TY +IH L RA EA +++ M E GL P +Y V
Sbjct: 356 -TYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV 395
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMA------ESDENTYTSLIHLFCDQGQ---CD 92
D YN ++ A CR G ++A +L M D TYT LI +C G C
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 93 KAYK--------VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPN 144
KA + +F EM+ GF P V TYN ++ C+ R AL + + +G PN
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 145 LISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD-DKTYTSLIHLFCNKGKVEKAFEMK 203
+++N+ ++ + ++E A E+++ M + G + TYT LIH + +A ++
Sbjct: 318 QVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLV 377
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
EMV G++P TY + +L + S + + +R G+
Sbjct: 378 VEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQ 421
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 140 GFEPNLISFN----ALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
GF+ N I+ L +G KG + ++ + N K + + + T L+ +G
Sbjct: 122 GFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNV-VTTASITCLMKCLGEEGF 180
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL--SPDNKTY 253
V++A M PD Y +I +LC +A L +M G PD TY
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 254 TGLMSAY-----------RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
T L+S+Y ++ + +A + EM+ +GF+PD VT YN +I G
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVT--------YNCLIDG 292
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDK 356
C +R ALE+ M G P+ V+Y++ I + E+ A ++ M K
Sbjct: 293 CCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D +Y+S+I + G +K K+F M P YNA+V A + EA ++
Sbjct: 301 DVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLM 360
Query: 134 RCLIE-RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCN 192
+ + E +G EPN++++N+L++ C K EEA+++ EM +KGL +TY + + +
Sbjct: 361 KTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRT 420
Query: 193 KGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKT 252
E+ FE+ A+M G P +TY LI LC + L+ EM + + PD +
Sbjct: 421 G---EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSS 477
Query: 253 YTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
Y ++ L + +A+ EM KG P+
Sbjct: 478 YIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 16/286 (5%)
Query: 47 YNKLVLACCRDGRVEEALGIL---RGMAESDENTYTSLIHLFCDQ-GQCDKAYKVFAEMI 102
+ L+ A CR V +A ++ + D ++ +++ +C+ G +A +V+ EM
Sbjct: 235 FQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMG 294
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+ G V +Y++++ Y + + L + + + EP+ +NA+V +
Sbjct: 295 NVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVS 354
Query: 163 EAEELLQEMNQ-KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
EA L++ M + KG+ + TY SLI C K E+A ++ EM+ KG+ P TY
Sbjct: 355 EARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAF 414
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
+ L +T E F+L +M + G P +TY L+ F L DEM K
Sbjct: 415 MRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTV 471
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPD 327
PD +Y +IHGL L + EEA + M + G+ P+
Sbjct: 472 GPDL--------SSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 133/297 (44%), Gaps = 16/297 (5%)
Query: 67 LRGMAESDENTYTSLIHL--FCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDK 124
+R + S N+ T LI + +C KA F + + +++ A CR K
Sbjct: 187 MRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYK 246
Query: 125 RFREALGILRCLIERGFEPNLISFNALVQGFCGK-GKMEEAEELLQEMNQKGLALDDKTY 183
+A ++ C ++ + + SFN ++ G+C G EAE + EM G+ D +Y
Sbjct: 247 NVSDAGHLIFCNKDK-YPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSY 305
Query: 184 TSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEM-L 242
+S+I + G + K ++ M + I PD Y ++ +L +SEA +L + M
Sbjct: 306 SSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEE 365
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
+G+ P+ TY L+ + +A + DEM+ KG P TY+A +
Sbjct: 366 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTI--------RTYHAFMR- 416
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
+L EE E+L M ++G P +Y +I CR R+ L EM +K++
Sbjct: 417 --ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTV 471
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 37/207 (17%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES-----DENTYTSLIHLFCDQGQCDKAYKV 97
D YN +V A + V EA +++ M E + TY SLI C + ++A +V
Sbjct: 336 DRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQV 395
Query: 98 FAEMIDTGFSPSVATYNA--------------------------------IVLAYCRDKR 125
F EM++ G P++ TY+A ++ CR +
Sbjct: 396 FDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRD 455
Query: 126 FREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTS 185
F L + + E+ P+L S+ ++ G GK+EEA +EM KG+ ++
Sbjct: 456 FDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDM 515
Query: 186 LIHLFCNKGKVEKAFEMKAEMVHKGIL 212
+ F K E+ V+KG +
Sbjct: 516 IQSWFSGKQYAEQRITDSKGEVNKGAI 542
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 14/273 (5%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
LI + G + A +V + + G +P+V +Y A++ +Y R + A I R + G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEM---NQKGLALDDKTYTSLIHLFCNKGKVE 197
EP+ I++ +++ F K +EAEE+ + + + L D K Y +I+++ G E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
KA ++ + MV KG+ TY L + + + E ++ +M R + PD +Y L+
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLI 321
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
AY + +A + +EM+ G P +H YN ++ + E+A + +
Sbjct: 322 KAYGRARREEEALSVFEEMLDAGVRP--------THKAYNILLDAFAISGMVEQAKTVFK 373
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
M + PD SY+T++ + ++ A K
Sbjct: 374 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 406
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 111/276 (40%), Gaps = 40/276 (14%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAI--------------- 116
+ D+ Y +I+++ G +KA KVF+ M+ G S TYN++
Sbjct: 244 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYD 303
Query: 117 -----------------VLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
+ AY R +R EAL + +++ G P ++N L+ F G
Sbjct: 304 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+E+A+ + + M + + D +YT+++ + N +E A + + G P+ TYG
Sbjct: 364 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 423
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
LI + + +++++M G+ + T +M A F A EM
Sbjct: 424 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESC 483
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
G PD N ++ D EEA E+
Sbjct: 484 GVPPD--------QKAKNVLLSLASTQDELEEAKEL 511
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 153/397 (38%), Gaps = 54/397 (13%)
Query: 146 ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE 205
I F L+ + G AE +L +++ G + +YT+L+ + GK A +
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML---RRGLSPDNKTYTGLMSAYRL 262
M G P A TY ++ + EA ++F+ +L + L PD K Y ++ Y+
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 263 QAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEI 322
+ KA + M+ KG + S VTYN++ + +E +I M
Sbjct: 260 AGNYEKARKVFSSMVGKG--------VPQSTVTYNSL---MSFETSYKEVSKIYDQMQRS 308
Query: 323 GLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHE 382
+ PD VSY+ +I + R R +A + EM +D V +H+
Sbjct: 309 DIQPDVVSYALLIKAYGRARREEEALSVFEEM----------------LDAGVRP--THK 350
Query: 383 DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLW 442
++ L+ + G +E+A + + + P Y+ L+ + + A+
Sbjct: 351 -AYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK---- 405
Query: 443 FISHVCLR--MPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNY 500
F + + P + Y TLI KG+ ++K +++M
Sbjct: 406 FFKRIKVDGFEPNIVTYGTLI---------------KGYAKANDVEKMMEVYEKMRLSGI 450
Query: 501 KPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP 537
K + + ++ RC N A Y EM G P
Sbjct: 451 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 487
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 14/273 (5%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
LI + G + A +V + + G +P+V +Y A++ +Y R + A I R + G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEM---NQKGLALDDKTYTSLIHLFCNKGKVE 197
EP+ I++ +++ F K +EAEE+ + + + L D K Y +I+++ G E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
KA ++ + MV KG+ TY L + + + E ++ +M R + PD +Y L+
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLI 328
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
AY + +A + +EM+ G P +H YN ++ + E+A + +
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGVRP--------THKAYNILLDAFAISGMVEQAKTVFK 380
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
M + PD SY+T++ + ++ A K
Sbjct: 381 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 413
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 111/276 (40%), Gaps = 40/276 (14%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAI--------------- 116
+ D+ Y +I+++ G +KA KVF+ M+ G S TYN++
Sbjct: 251 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYD 310
Query: 117 -----------------VLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
+ AY R +R EAL + +++ G P ++N L+ F G
Sbjct: 311 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+E+A+ + + M + + D +YT+++ + N +E A + + G P+ TYG
Sbjct: 371 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 430
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
LI + + +++++M G+ + T +M A F A EM
Sbjct: 431 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESC 490
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
G PD N ++ D EEA E+
Sbjct: 491 GVPPD--------QKAKNVLLSLASTQDELEEAKEL 518
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 153/397 (38%), Gaps = 54/397 (13%)
Query: 146 ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE 205
I F L+ + G AE +L +++ G + +YT+L+ + GK A +
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML---RRGLSPDNKTYTGLMSAYRL 262
M G P A TY ++ + EA ++F+ +L + L PD K Y ++ Y+
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 263 QAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEI 322
+ KA + M+ KG + S VTYN++ + +E +I M
Sbjct: 267 AGNYEKARKVFSSMVGKG--------VPQSTVTYNSL---MSFETSYKEVSKIYDQMQRS 315
Query: 323 GLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHE 382
+ PD VSY+ +I + R R +A + EM +D V +H+
Sbjct: 316 DIQPDVVSYALLIKAYGRARREEEALSVFEEM----------------LDAGVRP--THK 357
Query: 383 DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLW 442
++ L+ + G +E+A + + + P Y+ L+ + + A+
Sbjct: 358 -AYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK---- 412
Query: 443 FISHVCLR--MPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNY 500
F + + P + Y TLI KG+ ++K +++M
Sbjct: 413 FFKRIKVDGFEPNIVTYGTLI---------------KGYAKANDVEKMMEVYEKMRLSGI 457
Query: 501 KPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP 537
K + + ++ RC N A Y EM G P
Sbjct: 458 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 494
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/527 (22%), Positives = 224/527 (42%), Gaps = 76/527 (14%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN ++ + G+++EA + M E T+ ++IH++ + GQ + + M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+P TYN ++ + ++ A + + + G +P+ +S+ L+ F + +
Sbjct: 360 -KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKA------FEMKAEMVHKGILPDA 215
EEAE L+ EM+ + +D+ T ++L ++ +EK+ F + M +G +
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANI 478
Query: 216 DTYGPLIGSLCLQQTLSEAFDLF---QEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHL 272
D YG + LSEA +F QE+ +R + Y ++ AY + KA L
Sbjct: 479 DAYGE-------RGYLSEAERVFICCQEVNKRTVIE----YNVMIKAYGISKSCEKACEL 527
Query: 273 QDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYS 332
+ M+ G PD TYN ++ L D + L M E G D + Y
Sbjct: 528 FESMMSYGVTPD--------KCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYC 579
Query: 333 TVIFGFCRIRELGKA---YKLKVE--MDKKSISWLGLWGLYDDIDKSVMQGLSHEDT--- 384
VI F ++ +L A YK VE ++ + + L + D +V Q +S+ +
Sbjct: 580 AVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG-NVQQAMSYVEAMKE 638
Query: 385 ---------FSNLMSDYLAEGHLEKAYLLEREI----NYFDYLPVDVHYS-VFLNVLNKK 430
+++L+ Y G+L++A + R++ N Y DV+ S +N+ +++
Sbjct: 639 AGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQY--PDVYTSNCMINLYSER 696
Query: 431 ARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAAR 490
+ + +A+ I+D++ + NEF + L + G ++A +
Sbjct: 697 SMVRKAE-----------------AIFDSMKQRGEANEFTFAMMLCM-YKKNGRFEEATQ 738
Query: 491 AHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP 537
+M E D YN ++ G +A + + EMV G P
Sbjct: 739 IAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQP 785
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 184/459 (40%), Gaps = 53/459 (11%)
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
++ EMI G P +TY ++ Y + AL L + + G +P+ ++ ++Q +
Sbjct: 209 LWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYK 268
Query: 157 GKGKMEEAEELLQEMN------QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKG 210
+ ++AEE ++ + + L TY ++I + G++++A E M+ +G
Sbjct: 269 KAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEG 328
Query: 211 ILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAF 270
I+P T+ +I L E L + M + +PD +TY L+S + +A
Sbjct: 329 IVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAG 387
Query: 271 HLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVS 330
EM G PD V+Y +++ + EEA ++ M + + D +
Sbjct: 388 AYFKEMKDDGLKPD--------PVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYT 439
Query: 331 YSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMS 390
S L + Y ++ EM +KS SW + V +S E +N+
Sbjct: 440 QSA----------LTRMY-VEAEMLEKSWSWFKRF--------HVAGNMSSEGYSANI-- 478
Query: 391 DYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR 450
+ + E+ YL E E + V+ + NV+ K I+++ C
Sbjct: 479 ----DAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKS-------CEKACEL 527
Query: 451 MPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLL 510
+ + Y + C+ N LV+ + K ++M E Y D Y +
Sbjct: 528 FESMMSYGVTPDKCTYNT------LVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAV 581
Query: 511 IFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
I + G ++ A ++Y EMV Y P + LI A
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF 620
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 145/327 (44%), Gaps = 17/327 (5%)
Query: 47 YNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
YN ++ A E+A + M D+ TY +L+ + K +M
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+TG+ Y A++ ++ + + A + + ++E EP+++ + L+ F G ++
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV---HKGILPDADTYG 219
+A ++ M + G+ + Y SLI L+ G +++A + +++ +K PD T
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN 687
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
+I + + +A +F M +RG + T+ ++ Y+ +F +A + +M
Sbjct: 688 CMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
L D ++YN+++ L R +EA+E + M G+ PD ++ ++
Sbjct: 747 KILTD--------PLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILM 798
Query: 340 RIRELGKAYKLKVEMDKKSIS-WLGLW 365
++ KA + E+ KK I L LW
Sbjct: 799 KLGMSKKAVRKIEEIRKKEIKRGLELW 825
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 43/256 (16%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D+ TYN LV + L M E SD Y ++I F GQ + A +V+
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM++ P V Y ++ A+ ++A+ + + E G N + +N+L++ +
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 159 GKMEEAE----ELLQE----------------------------------MNQKGLALDD 180
G ++EAE +LLQ M Q+G A ++
Sbjct: 659 GYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEA-NE 717
Query: 181 KTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQE 240
T+ ++ ++ G+ E+A ++ +M IL D +Y ++G L EA + F+E
Sbjct: 718 FTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKE 777
Query: 241 MLRRGLSPDNKTYTGL 256
M+ G+ PD+ T+ L
Sbjct: 778 MVSSGIQPDDSTFKSL 793
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 12/193 (6%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAESDENT-----YTS--LIHLFCDQGQCDKA 94
+ YN L+ + G ++EA I R + +S T YTS +I+L+ ++ KA
Sbjct: 643 GNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKA 702
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
+F M G + T+ ++ Y ++ RF EA I + + E + +S+N+++
Sbjct: 703 EAIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGL 761
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTS----LIHLFCNKGKVEKAFEMKAEMVHKG 210
F G+ +EA E +EM G+ DD T+ S L+ L +K V K E++ + + +G
Sbjct: 762 FALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRG 821
Query: 211 ILPDADTYGPLIG 223
+ T L+G
Sbjct: 822 LELWISTLSSLVG 834
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 11/247 (4%)
Query: 73 SDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGI 132
S E +I+L+ G + A KVF EM + + ++NA++ A K+F GI
Sbjct: 104 SKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGI 163
Query: 133 LRCLIER-GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+ L + EP++ S+N L++G CGKG EA L+ E+ KGL D T+ L+H
Sbjct: 164 FKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESY 223
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
KGK E+ ++ A MV K + D +Y + L ++ E LF ++ L PD
Sbjct: 224 TKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVF 283
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP-DFVTGISTSHVTYNAIIHGLCLLDRAE 310
T+T ++ + + + +A E+ G P FV +N+++ +C E
Sbjct: 284 TFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFV---------FNSLLPAICKAGDLE 334
Query: 311 EALEILR 317
A E+ +
Sbjct: 335 SAYELCK 341
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 137/319 (42%), Gaps = 17/319 (5%)
Query: 11 FLRNRVPPPDVMIRGFAAA----WTET---EKTNWKGLADETTYNKLVLACCRDGRVEEA 63
+ R + + +R AAA W E E+ + ++ E +++ R G E A
Sbjct: 66 WFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENA 125
Query: 64 LGILRGMAESDEN----TYTSLIHLFCDQGQCDKAYKVFAEMIDT-GFSPSVATYNAIVL 118
+ M E + ++ +L++ + + D +F E+ P VA+YN ++
Sbjct: 126 QKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIK 185
Query: 119 AYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLAL 178
C F EA+ ++ + +G +P+ I+FN L+ KGK EE E++ M +K +
Sbjct: 186 GLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKR 245
Query: 179 DDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLF 238
D ++Y + + + K E+ + ++ + PD T+ +I + L EA +
Sbjct: 246 DIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWY 305
Query: 239 QEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNA 298
+E+ + G P + L+ A A+ L E+ K L D + +A
Sbjct: 306 KEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVD----EAVLQEVVDA 361
Query: 299 IIHGLCLLDRAEEALEILR 317
++ G D AEE +E+ +
Sbjct: 362 LVKG-SKQDEAEEIVELAK 379
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 34/307 (11%)
Query: 106 FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS--FNALVQGFCGK-GKME 162
F ++A Y V K+F IL E+ PN+ F A + G+ G E
Sbjct: 67 FRKNIAVYERTVRRLAAAKKFEWVEEILE---EQNKYPNMSKEGFVARIINLYGRVGMFE 123
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK-GILPDADTYGPL 221
A+++ EM ++ ++ +L++ N K + + E+ K I PD +Y L
Sbjct: 124 NAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTL 183
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I LC + + +EA L E+ +GL PD+ T+ L+ + +F + + M+ K
Sbjct: 184 IKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNV 243
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
D + YNA + GL + +++EE + + + L PD +++ +I GF
Sbjct: 244 KRDIRS--------YNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
+L +A I+W Y +I+K+ + L F++L+ G LE A
Sbjct: 296 GKLDEA-----------ITW------YKEIEKNGCRPLKF--VFNSLLPAICKAGDLESA 336
Query: 402 YLLEREI 408
Y L +EI
Sbjct: 337 YELCKEI 343
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 162/391 (41%), Gaps = 42/391 (10%)
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYC-RDKRFREALGILRCLIERGFEPNLISFNALVQG 154
+ F+ + +PS + I L RD +F C E F N+ + V+
Sbjct: 22 RFFSAVTAAAATPSPPKPSLITLVNDERDPKFITEKFKKACQAE-WFRKNIAVYERTVRR 80
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
K E EE+L+E N+ + +I+L+ G E A ++ EM +
Sbjct: 81 LAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRT 140
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRR-----GLSPDNKTYTGLMSAYRLQAQFSKA 269
A ++ L+ + C+ S+ FDL + + + + PD +Y L+ + F++A
Sbjct: 141 ALSFNALLNA-CVN---SKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEA 196
Query: 270 FHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAV 329
L DE+ +KG PD H+T+N ++H + EE +I M E + D
Sbjct: 197 VALIDEIENKGLKPD--------HITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIR 248
Query: 330 SYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLM 389
SY+ + G M+ KS + L +D + + ++ TF+ ++
Sbjct: 249 SYNARLLGLA--------------MENKSEEMVSL---FDKLKGNELKPDVF--TFTAMI 289
Query: 390 SDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCL 449
+++EG L++A +EI P+ ++ L + K + E+ + L I L
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDL-ESAYELCKEIFAKRL 348
Query: 450 RMPTFI---IYDTLIENCSNNEFKSVVGLVK 477
+ + + D L++ +E + +V L K
Sbjct: 349 LVDEAVLQEVVDALVKGSKQDEAEEIVELAK 379
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 119/288 (41%), Gaps = 13/288 (4%)
Query: 56 RDGRVEEALGILRGMAES-----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSV 110
++G V++A+ + G+ ++ + Y SL+H CD AY + MI G P
Sbjct: 158 KNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDK 217
Query: 111 ATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQE 170
TY +V +C + +EA L + RGF P + L++G G +E A+E++ +
Sbjct: 218 RTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSK 277
Query: 171 MNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQT 230
M + G D +T+ LI G+VE EM G+ D DTY LI ++
Sbjct: 278 MTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGK 337
Query: 231 LSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIS 290
+ EAF L + G P Y ++ F AF +M K P+
Sbjct: 338 IDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPN------ 391
Query: 291 TSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
Y +I + +A L M E+GL P + + V G
Sbjct: 392 --RPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGL 437
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 116/285 (40%), Gaps = 15/285 (5%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREAL----GIL 133
Y L + + +K+ +M D S T I+ Y ++ +A+ G+
Sbjct: 114 YEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVP 173
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ L G + + +N+L+ C A L++ M +KGL D +TY L++ +C+
Sbjct: 174 KTL---GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSA 230
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
GK+++A E EM +G P A LI L L A ++ +M + G PD +T+
Sbjct: 231 GKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTF 290
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
L+ A + + G D T Y +I + + + +EA
Sbjct: 291 NILIEAISKSGEVEFCIEMYYTACKLGLCVDIDT--------YKTLIPAVSKIGKIDEAF 342
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS 358
+L E G P Y+ +I G CR A+ +M K+
Sbjct: 343 RLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 18 PP----DVMIRGF-AAAWTETEK------TNWKGLADETTYNKLVLACCRDGRVEEALGI 66
PP D++I G A + E+ K T + D T+N L+ A + G VE + +
Sbjct: 250 PPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEM 309
Query: 67 LRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCR 122
+ D +TY +LI G+ D+A+++ ++ G P + Y I+ CR
Sbjct: 310 YYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCR 369
Query: 123 DKRFREALGILRCLIERGFEPNLISFNALVQGFCGK-GKMEEAEELLQEMNQKGLALDDK 181
+ F +A + + PN + L+ CG+ GK +A L EM + GL +
Sbjct: 370 NGMFDDAFSFFSDMKVKAHPPNRPVYTMLIT-MCGRGGKFVDAANYLVEMTEMGLVPISR 428
Query: 182 TYTSLIHLFCNKGKVEKAFEMK 203
+ + N GK + A ++
Sbjct: 429 CFDMVTDGLKNGGKHDLAMRIE 450
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 144/332 (43%), Gaps = 32/332 (9%)
Query: 1 MKLLRVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRV 60
+++ +L + R+R ++ W E + N K TY L+ CR RV
Sbjct: 250 VRIFNILLNGWFRSR------KLKQAEKLWEEMKAMNVKPTV--VTYGTLIEGYCRMRRV 301
Query: 61 EEALGILR--GMAESDEN--TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAI 116
+ A+ +L MAE + N + +I + G+ +A + P++ TYN++
Sbjct: 302 QIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSL 361
Query: 117 VLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGL 176
V +C+ A IL+ ++ RG +P ++N + F K EE L ++ + G
Sbjct: 362 VKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH 421
Query: 177 ALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFD 236
+ D TY ++ + C GK+ A ++ EM ++GI PD T LI LC + L EAF+
Sbjct: 422 SPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE 481
Query: 237 LFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM---IHKGFLPDFVTGISTSH 293
F +RRG+ P T+ + + R + A L M H LP+
Sbjct: 482 EFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPN--------- 532
Query: 294 VTYNAIIHGL-------CLLDRAEEALEILRG 318
TY + +L RAE ++L+G
Sbjct: 533 -TYREAVDAPPDKDRRKSILHRAEAMSDVLKG 563
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 128/296 (43%), Gaps = 15/296 (5%)
Query: 50 LVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFC-------DQGQCDKAYKVFAEMI 102
L+ A C++G V EA L + + ++ + + +F + +A K++ EM
Sbjct: 218 LLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMK 277
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
P+V TY ++ YCR +R + A+ +L + E N + FN ++ G G++
Sbjct: 278 AMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLS 337
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
EA +++ TY SL+ FC G + A ++ M+ +G+ P TY
Sbjct: 338 EALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFF 397
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
E +L+ +++ G SPD TY ++ + S A + EM ++G
Sbjct: 398 KYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGID 457
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
PD +T +IH LC L+ EEA E G+ P +++ + G
Sbjct: 458 PDLLT--------TTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGL 505
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 145/342 (42%), Gaps = 25/342 (7%)
Query: 24 RGFAAAWT----ETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYT 79
R F AW+ L T+ L+ R G V++A+ A S E
Sbjct: 149 REFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE-FARSYEPVCK 207
Query: 80 S---------LIHLFCDQGQCDKAYKVFAEM---IDTGFSPSVATYNAIVLAYCRDKRFR 127
S L+ C +G +A + +D+ + PSV +N ++ + R ++ +
Sbjct: 208 SATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLK 267
Query: 128 EALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
+A + + +P ++++ L++G+C +++ A E+L+EM + ++ + +I
Sbjct: 268 QAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPII 327
Query: 188 HLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
G++ +A M P TY L+ + C L A + + M+ RG+
Sbjct: 328 DGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVD 387
Query: 248 PDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLD 307
P TY + + + +L ++I G PD +TY+ I+ LC
Sbjct: 388 PTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPD--------RLTYHLILKMLCEDG 439
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
+ A+++ + M G+ PD ++ + +I CR+ L +A++
Sbjct: 440 KLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE 481
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/444 (19%), Positives = 166/444 (37%), Gaps = 91/444 (20%)
Query: 135 CLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKG 194
L E G EP++ +AL + + EM + G L + S+++ C
Sbjct: 91 ALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEM-KPGFTLSPSLFDSVVNSLCKAR 149
Query: 195 KVEKAFEMKAEMVHK---GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
+ E A+ + + V L ADT+ LI + +A F+ R P K
Sbjct: 150 EFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE--FARSYEPVCK 207
Query: 252 TYTGLMSAYRLQAQFSKAFHLQD-----EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLL 306
+ T L L K H+++ E I ++V + +N +++G
Sbjct: 208 SATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRI----FNILLNGWFRS 263
Query: 307 DRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWG 366
+ ++A ++ M + + P V+Y T+I G+CR+R + A ++
Sbjct: 264 RKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV---------------- 307
Query: 367 LYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNV 426
LE+ + E EIN+ + P+ ++
Sbjct: 308 -------------------------------LEEMKMAEMEINFMVFNPI-------IDG 329
Query: 427 LNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIEN-CSNNEFKSVVGLVKGFGMRGL- 484
L + R++EA + F VC PT + Y++L++N C + ++K RG+
Sbjct: 330 LGEAGRLSEALGMMERFF--VCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVD 387
Query: 485 ------------------MKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDM 526
++ + +++E + PD Y+L++ C G + A +
Sbjct: 388 PTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQV 447
Query: 527 YMEMVHYGFAPHMFSVLALIEALC 550
EM + G P + + LI LC
Sbjct: 448 NKEMKNRGIDPDLLTTTMLIHLLC 471
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 6/235 (2%)
Query: 32 ETEKTNWKGLADETTYNKLVLACCRDGRV---EEALGILRGMAESDE-NTYTSLIHLFCD 87
E KT K L + C DG + +E LG L G A ++ +IH C
Sbjct: 325 ELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCR 384
Query: 88 QGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS 147
A + +MI G +P A +N +V A + EA +L+ + RG +P++ +
Sbjct: 385 MRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYT 444
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
+ ++ G+ G M+EA+E+L E +K L TY +LI +C + ++A ++ EM
Sbjct: 445 YTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMD 504
Query: 208 HKGILPDADTYGPLIGSLCLQQ-TLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYR 261
G+ P+AD Y LI S CL+ +A LF+EM ++GL N GL+ A +
Sbjct: 505 RFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHL-NAISQGLIRAVK 558
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 151/352 (42%), Gaps = 46/352 (13%)
Query: 50 LVLACCRDGRVEEALGILRGMAESDEN---------TYTSLIHLFCDQGQCDKAYKVFAE 100
L++A D R +A G+ + E E LI LF G+ A+ VF++
Sbjct: 197 LLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSK 256
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
+ GF+P+ TY + A C+ A + +++ G ++ FC +GK
Sbjct: 257 TEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGK 316
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFC-NKGKVEKAFEM----KAEMVHKGILPDA 215
EEA + + K +L + +LI C N G + A EM E +GI P +
Sbjct: 317 AEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFS 376
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
D +I SLC + + +A L +M+ +G +P N + ++ A +A +
Sbjct: 377 D----VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKL 432
Query: 276 MIHKGFLPD------FVTGIST---------------------SHVTYNAIIHGLCLLDR 308
M +G PD ++G + S VTY+A+I G C ++
Sbjct: 433 MESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEE 492
Query: 309 AEEALEILRGMPEIGLSPDAVSYSTVIFGFC-RIRELGKAYKLKVEMDKKSI 359
+EAL++L M G+ P+A Y+ +I FC + + KA L EM +K +
Sbjct: 493 YDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 24/260 (9%)
Query: 80 SLIHLFCDQGQCDKAYKVF--AEMIDTGFSPS-VATYNAIVLAYCRDKRF----REALGI 132
++I FC +G+ ++AY V+ A+ + P VAT ++ A C++ +E LG
Sbjct: 306 NIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVAT---LITALCKNDGTITFAQEMLGD 362
Query: 133 LRCLIER-GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
L R G +P F+ ++ C +++A+ LL +M KG A + + ++H
Sbjct: 363 LSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACS 418
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
G +++A E+ M +G+ PD TY +I + EA ++ E ++
Sbjct: 419 KTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPV 478
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
TY L+ Y ++ +A L +EM G P+ YN +I CL E
Sbjct: 479 TYHALIRGYCKIEEYDEALKLLNEMDRFGVQPN--------ADEYNKLIQSFCLKALDWE 530
Query: 312 ALEIL-RGMPEIGLSPDAVS 330
E+L M + GL +A+S
Sbjct: 531 KAEVLFEEMKQKGLHLNAIS 550
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 28/328 (8%)
Query: 39 KGLADETTYNKLVLACCRDGR-VEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDK 93
+ + D + + + + C R +EAL IL G+ D +S+IH CD G+ D+
Sbjct: 49 RSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDE 108
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI--ERGFEPNLISFNAL 151
A++ F + +GF P T N I+ + LG++ LI ++ F P+L ++N L
Sbjct: 109 AHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRL 168
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
+ C ++ +A +L+ +M +G D T+T+LI +C ++E A ++ EM GI
Sbjct: 169 MNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGI 228
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAF- 270
P++ T LIG + + L +E+ N+T T + +A AF
Sbjct: 229 RPNSLTLSVLIGGFLKMRDVETGRKLMKELWE---YMKNETDTSMKAA---------AFA 276
Query: 271 HLQDEMIHKGFLPD-FVTGISTS-------HVTYNAIIHGLCLLDRAEEALEILRGMPEI 322
+L D M +G+ D F + S Y +I LC R A I+ M
Sbjct: 277 NLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSK 336
Query: 323 GLSPDAVSYSTVIFGFCRIRELGKAYKL 350
GL P SY+ +I G C+ +AY+L
Sbjct: 337 GLKPRRTSYNAIIHGLCKDGGCMRAYQL 364
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 114/531 (21%), Positives = 198/531 (37%), Gaps = 70/531 (13%)
Query: 58 GRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIV 117
G + +G + S N Y L++ C + A+K+ +M + G P V T+ ++
Sbjct: 146 GVIHRLIGFKKEFVPSLTN-YNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLI 204
Query: 118 LAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM-----N 172
YC + A + + G PN ++ + L+ GF +E +L++E+ N
Sbjct: 205 GGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKN 264
Query: 173 QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLS 232
+ ++ + +L+ C +G FE+ M + YG +I SLC +
Sbjct: 265 ETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNH 324
Query: 233 EAFDLFQEMLRRGLSPDNKTYT----------GLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
A + M +GL P +Y G M AY+L + S+ E +K +
Sbjct: 325 GAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLM 384
Query: 283 PDFVTGISTSHV-----------------TYNAIIHGLCLLDRAEEALEILRGMPEIGLS 325
+ T YN + GLC++D E L +L M +
Sbjct: 385 ESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCR 444
Query: 326 PDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTF 385
PD + +TVI G C++ + A K+ +M G + D + T
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDM------MTGKFCAPDAV------------TL 486
Query: 386 SNLMSDYLAEGHLEKAY-LLEREINYFDYLPVDVHYSVFLNVLNK--------------- 429
+ +M LA+G E+A +L R + P V Y+ + L K
Sbjct: 487 NTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLE 546
Query: 430 KARITEAKHHLLWFISHVCLRMPTFI---IYDTLIENCSNNEFKSVVGLVKGFGMRGLMK 486
KA +T I +C+ + +D +I ++ +KG G +
Sbjct: 547 KASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLS 606
Query: 487 KAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAP 537
A + + P+ YN +I + R G +AY + EM G AP
Sbjct: 607 DACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAP 657
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/491 (20%), Positives = 182/491 (37%), Gaps = 125/491 (25%)
Query: 44 ETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFA 99
E Y ++ + CR R A I+ M + +Y ++IH C G C +AY++
Sbjct: 307 EFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLE 366
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
E + F PS TY ++ + C++ +A +L ++ + +N ++G C
Sbjct: 367 EGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMD 426
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH-KGILPDADTY 218
E +L M Q D+ T ++I+ C G+V+ A ++ +M+ K PDA T
Sbjct: 427 NPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTL 486
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
++ L Q EA D+ ++ P+NK G+
Sbjct: 487 NTVMCGLLAQGRAEEALDVLNRVM-----PENKIKPGV---------------------- 519
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
V YNA+I GL L + +EA+ + + + ++ D+ +Y+ +I G
Sbjct: 520 ---------------VAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHL 398
C KV+M KK +DD V+ D F
Sbjct: 565 CVTN--------KVDMAKK---------FWDD----VIWPSGRHDAFV------------ 591
Query: 399 EKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYD 458
Y+ FL L + +++A H L + P + Y+
Sbjct: 592 ---------------------YAAFLKGLCQSGYLSDACHFLYDLADSGAI--PNVVCYN 628
Query: 459 TLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCG 518
T+I CS + GL ++A + + M + PD + +L
Sbjct: 629 TVIAECSRS---------------GLKREAYQILEEMRKNGQAPDAVTWRIL-------D 666
Query: 519 NVHKAYDMYME 529
+H + D+ +E
Sbjct: 667 KLHDSMDLTVE 677
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 184/443 (41%), Gaps = 58/443 (13%)
Query: 163 EAEELLQEMNQKGLALDDKTY-TSLIHLFCN-KGKVEKAFEMKAEMVHKGILPDADTYGP 220
E E+ E + ++ D+ Y IH C + ++A + + +G PD+
Sbjct: 36 EGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSS 95
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK- 279
+I SLC EA F L G PD +T +++ RL S L +IH+
Sbjct: 96 VIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIA--RLLYSRSPVSTLG--VIHRL 151
Query: 280 -GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
GF +FV ++ YN +++ LC + R +A +++ M G PD V+++T+I G+
Sbjct: 152 IGFKKEFVPSLTN----YNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGY 207
Query: 339 CRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHL 398
C IREL A+K+ EM I L T S L+ +L +
Sbjct: 208 CEIRELEVAHKVFDEMRVCGIRPNSL-------------------TLSVLIGGFLKMRDV 248
Query: 399 EKAYLLEREINYFDYLPVDVHYSV----FLNVLNKKARITEAKHHLLWFISH---VCLRM 451
E L +E+ ++Y+ + S+ F N+++ R E + ++ I+ +C +
Sbjct: 249 ETGRKLMKEL--WEYMKNETDTSMKAAAFANLVDSMCR--EGYFNDIFEIAENMSLCESV 304
Query: 452 PTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLI 511
Y +I+ S+ + G AAR M KP YN +I
Sbjct: 305 NVEFAYGHMID--------SLCRYRRNHG-------AARIVYIMKSKGLKPRRTSYNAII 349
Query: 512 FDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNL 571
C+ G +AY + E + F P ++ L+E+LC K V++ LR
Sbjct: 350 HGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGA 409
Query: 572 NDSELLQV-LNEIDVREGQTEYL 593
+ + + + L + V + TE L
Sbjct: 410 DRTRIYNIYLRGLCVMDNPTEIL 432
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 77/211 (36%), Gaps = 30/211 (14%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
D T N ++ GR EEAL +L + M
Sbjct: 482 DAVTLNTVMCGLLAQGRAEEALDVLNRV------------------------------MP 511
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+ P V YNA++ + + EA+ + L + + ++ ++ G C K++
Sbjct: 512 ENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVD 571
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
A++ ++ D Y + + C G + A ++ G +P+ Y +I
Sbjct: 572 MAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVI 631
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
EA+ + +EM + G +PD T+
Sbjct: 632 AECSRSGLKREAYQILEEMRKNGQAPDAVTW 662
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 15/304 (4%)
Query: 29 AWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAES---DENTYTSLIHLF 85
A+ E EK+ + D N L+ A ++ +E A + + ++ D T+ LIH F
Sbjct: 225 AFLEMEKS-YGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGF 283
Query: 86 CDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNL 145
C + D A + M T F+P V TY + V AYC++ FR +L + E G PN+
Sbjct: 284 CKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNV 343
Query: 146 ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE 205
+++ ++ ++ EA + ++M + G D K Y+SLIH+ G+ + A E+ +
Sbjct: 344 VTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFED 403
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR---RGLSPDNKTYTGLMSAYRL 262
M ++G+ D Y +I + A L + M SP+ +TY L+
Sbjct: 404 MTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCH 463
Query: 263 QAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEI 322
+ + L ++H D +S TY +I GLC+ + EEA
Sbjct: 464 KKKMK----LLGILLHHMVKNDVSIDVS----TYILLIRGLCMSGKVEEACLFFEEAVRK 515
Query: 323 GLSP 326
G+ P
Sbjct: 516 GMVP 519
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D T+N L+ C+ + ++A ++ M + D TYTS + +C +G + ++
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML 331
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM + G +P+V TY ++ + + K+ EALG+ + E G P+ +++L+
Sbjct: 332 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 391
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK---GILPDA 215
G+ ++A E+ ++M +G+ D Y ++I + + E A + M + P+
Sbjct: 392 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 451
Query: 216 DTYGPL-----------------------------------IGSLCLQQTLSEAFDLFQE 240
+TY PL I LC+ + EA F+E
Sbjct: 452 ETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEE 511
Query: 241 MLRRGLSPDNKT 252
+R+G+ P + T
Sbjct: 512 AVRKGMVPRDST 523
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 140 GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKA 199
G + + I+ N+L+ + +E A E+ ++ + D +T+ LIH FC K + A
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDA 292
Query: 200 FEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
M M PD TY + + C + ++ +EM G +P+ TYT +M +
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 260 YRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM 319
Q ++A + ++M G +PD Y+++IH L R ++A EI M
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPD--------AKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 320 PEIGLSPDAVSYSTVI 335
G+ D + Y+T+I
Sbjct: 405 TNQGVRRDVLVYNTMI 420
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 105/238 (44%), Gaps = 18/238 (7%)
Query: 104 TGFSPSVATYNAIV--LAYCRDKRFREALGILRCLIERGFEPNLISFNAL---VQGFCGK 158
TG+ S TYNA+V L CR+ + + L + + E L++ + + ++
Sbjct: 160 TGYVHSGHTYNAMVDVLGKCRN---FDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKS 216
Query: 159 GKMEEAEELLQEMNQK-GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
GK +A + EM + G+ D SL+ + +E A E+ ++ I PDA T
Sbjct: 217 GKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDART 275
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
+ LI C + +A + M +PD TYT + AY + F + + +EM
Sbjct: 276 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR 335
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
G P+ VT Y ++H L + EAL + M E G PDA YS++I
Sbjct: 336 ENGCNPNVVT--------YTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TY ++ + + +V EALG+ M E D Y+SLIH+ G+ A ++F +M
Sbjct: 345 TYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFE---PNLISFNALVQGFCGK 158
+ G V YN ++ A R AL +L+ + + E PN+ ++ L++ C K
Sbjct: 405 TNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHK 464
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
KM+ LL M + +++D TY LI C GKVE+A E V KG++P T
Sbjct: 465 KKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTC 524
Query: 219 GPLIGSLCLQQTLSEA 234
L+ L ++ ++EA
Sbjct: 525 KMLVDEL-EKKNMAEA 539
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 147 SFNALVQGFCGKGKMEEAEELLQEMNQ----KGLALDDKTYTSLIHLFCNKGKVEKAFEM 202
++NA+V + EL+ EMN+ K + LD T + ++ GK KA +
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLD--TMSKVMRRLAKSGKYNKAVDA 225
Query: 203 KAEMVHK-GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYR 261
EM G+ D L+ +L + ++ A ++F ++ + PD +T+ L+ +
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFC 284
Query: 262 LQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPE 321
+F A + D M F PD VT Y + + C E+L M E
Sbjct: 285 KARKFDDARAMMDLMKVTEFTPDVVT--------YTSFVEAYCKEGDFRRVNEMLEEMRE 336
Query: 322 IGLSPDAVSYSTVIFGFCRIRELGKA 347
G +P+ V+Y+ V+ + +++ +A
Sbjct: 337 NGCNPNVVTYTIVMHSLGKSKQVAEA 362
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 125/266 (46%), Gaps = 13/266 (4%)
Query: 30 WTETE-----KTNWKGLADET-TYNKLVLACCRDGRVEEALGILRGMAES----DENTYT 79
W E E K N G ++ YN ++ A + E+AL + +GM DE TY
Sbjct: 495 WVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYN 554
Query: 80 SLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER 139
SL + D+A ++ AEM+D+G P TY A++ +Y R +A+ + + +
Sbjct: 555 SLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKT 614
Query: 140 GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKA 199
G +PN + + +L+ GF G +EEA + + M + G+ + TSLI + G +E+A
Sbjct: 615 GVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEA 674
Query: 200 FEMKAEMVHKGILPDADTYGPLIGSLCLQ-QTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
+ +M PD ++ SLC +SEA +F + +G + D ++ +M
Sbjct: 675 RRVYDKMKDSEGGPDVAASNSML-SLCADLGIVSEAESIFNALREKG-TCDVISFATMMY 732
Query: 259 AYRLQAQFSKAFHLQDEMIHKGFLPD 284
Y+ +A + +EM G L D
Sbjct: 733 LYKGMGMLDEAIEVAEEMRESGLLSD 758
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/459 (20%), Positives = 186/459 (40%), Gaps = 44/459 (9%)
Query: 76 NTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRC 135
+T+ +LI L+ G+ + A +F+EM+ +G T+N ++ EA +L+
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 136 LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
+ E+G P+ ++N L+ G +E A E +++ + GL D T+ +++H+ C +
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
V + + AEM I D + P+I + + + L E + + T
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSV-PVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAA 484
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
++ Y K ++ E + G ++G + YN +I E+AL +
Sbjct: 485 VIDVYA-----EKGLWVEAETVFYG--KRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSL 537
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSV 375
+GM G PD +Y+++ + + +A ++ EM +D
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEM----------------LDSGC 581
Query: 376 MQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITE 435
G T++ +++ Y+ G L A L + P +V Y +N + + E
Sbjct: 582 KPGCK---TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEE 638
Query: 436 AKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRM 495
A + RM + E+ + + L+K + G +++A R +D+M
Sbjct: 639 AIQY---------FRM--------MEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
Query: 496 LEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYG 534
+ PD A N ++ G V +A ++ + G
Sbjct: 682 KDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 106/520 (20%), Positives = 211/520 (40%), Gaps = 72/520 (13%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAE 100
+T+N L+ + GR+ +A + M +S D T+ ++IH G +A + +
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M + G SP TYN ++ + AL R + + G P+ ++ A++ C +
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+ E E ++ EM++ + +D+ + ++ ++ N+G V +A + +L + T
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVL-SSTTLAA 484
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLS---PDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
+I + EA +F +R +S D Y ++ AY KA L M
Sbjct: 485 VIDVYAEKGLWVEAETVFYG--KRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMK 542
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
++G PD TYN++ L +D +EA IL M + G P +Y+ +I
Sbjct: 543 NQGTWPD--------ECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIAS 594
Query: 338 FCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGH 397
+ R+ L A L M+K + +E + +L++ + G
Sbjct: 595 YVRLGLLSDAVDLYEAMEKTGVK-------------------PNEVVYGSLINGFAESGM 635
Query: 398 LEKAYLLEREINYFDYLP---VDVHYSVFLNVLNKKARI--------------------- 433
+E+A I YF + V ++ V +++ +++
Sbjct: 636 VEEA------IQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Query: 434 TEAKHHLLWFISHVCLRMPTFIIYDTLIE--NCSNNEFKSVVGLVKGFGMRGLMKKAARA 491
A + +L + + + I++ L E C F +++ L KG GM + +A
Sbjct: 690 VAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGM---LDEAIEV 746
Query: 492 HDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMV 531
+ M E D +N ++ + G + + +++ EM+
Sbjct: 747 AEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEML 786
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 139/313 (44%), Gaps = 24/313 (7%)
Query: 34 EKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQG 89
EKT K +E Y L+ G VEEA+ R M E S+ TSLI + G
Sbjct: 612 EKTGVK--PNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVG 669
Query: 90 QCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRF-REALGILRCLIERGFEPNLISF 148
++A +V+ +M D+ P VA N++ L+ C D EA I L E+G ++ISF
Sbjct: 670 CLEEARRVYDKMKDSEGGPDVAASNSM-LSLCADLGIVSEAESIFNALREKG-TCDVISF 727
Query: 149 NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEM-V 207
++ + G G ++EA E+ +EM + GL D ++ ++ + G++ + E+ EM V
Sbjct: 728 ATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLV 787
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFS 267
+ +L D T+ L L SEA Q T ++A A
Sbjct: 788 ERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEA----KPLATPAITATLFSAMGL 843
Query: 268 KAFHLQD-EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSP 326
A+ L+ + + G +P H YNA+I+ + AL+ M E GL P
Sbjct: 844 YAYALESCQELTSGEIP-------REHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEP 896
Query: 327 DAVS--YSTVIFG 337
D V+ Y I+G
Sbjct: 897 DIVTQAYLVGIYG 909
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 159/400 (39%), Gaps = 48/400 (12%)
Query: 182 TYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEM 241
T+ +LI L+ G++ A + +EM+ G+ D T+ +I + LSEA L ++M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 242 LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIH 301
+G+SPD KTY L+S + A ++ G PD VT+ A++H
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPD--------TVTHRAVLH 418
Query: 302 GLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC------RIRELGKAYKLKVEMD 355
LC E ++ M + D S ++ + + + L + ++L +
Sbjct: 419 ILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLS 478
Query: 356 KKSISWL-------GLWGLYDDI--DKSVMQGLSHEDTFSNLMSDYLAEGHL-EKAYLLE 405
+++ + GLW + + K M G ++ N+M + L EKA L
Sbjct: 479 STTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLF 538
Query: 406 REINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCS 465
+ + P + Y+ +L + EA+ I+ + L C
Sbjct: 539 KGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQR----------------ILAEMLDSGCK 582
Query: 466 NNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYD 525
K+ ++ + GL+ A ++ M + KP+ VY LI G V +A
Sbjct: 583 PG-CKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQ 641
Query: 526 MYMEMVHYGFAPHMFSVLALIEALCCV-------RRYNKM 558
+ M +G + + +LI+A V R Y+KM
Sbjct: 642 YFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 143/340 (42%), Gaps = 44/340 (12%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
+ +++ CCR G V EA ++ M S N ++ L+ F G+ KA +F +MI
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI 274
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
G SP++ TY +++ + EA +L + G P+++ N ++ + G+ E
Sbjct: 275 QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFE 334
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE------------------------- 197
EA ++ + ++ L D T+ S++ C GK +
Sbjct: 335 EARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCF 394
Query: 198 -------KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDN 250
A ++ + M +K D TY + +LC A +++ +++ D
Sbjct: 395 SKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDA 454
Query: 251 KTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAE 310
++ ++ + +++ A HL I + + D V+ Y I GL R E
Sbjct: 455 HFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVS--------YTVAIKGLVRAKRIE 506
Query: 311 EALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
EA + M E G+ P+ +Y T+I G C+ +E K K+
Sbjct: 507 EAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKI 546
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 150/341 (43%), Gaps = 40/341 (11%)
Query: 54 CCRDGR---VEEALGILRGMAES---DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFS 107
C R GR V + + R + E + + ++ L C G +A++V MI +G S
Sbjct: 185 CSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGIS 244
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEEL 167
SV ++ +V + R ++A+ + +I+ G PNL+++ +L++GF G ++EA +
Sbjct: 245 VSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTV 304
Query: 168 LQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCL 227
L ++ +GLA D +IH + G+ E+A ++ + + ++PD T+ ++ SLC
Sbjct: 305 LSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC- 363
Query: 228 QQTLSEAFDLFQEMLRRGLSPDNKTYTG--LMSAYRLQAQFSKAFHLQDEMIHKGFLPDF 285
LS FDL + G+ D TG L + + S A + M +K F D
Sbjct: 364 ---LSGKFDLVPR-ITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDC 419
Query: 286 VT-----------GISTSHVT----------------YNAIIHGLCLLDRAEEALEILRG 318
T G + + ++AII L L + A+ + +
Sbjct: 420 YTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKR 479
Query: 319 MPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
D VSY+ I G R + + +AY L +M + I
Sbjct: 480 CILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGI 520
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 119/534 (22%), Positives = 203/534 (38%), Gaps = 86/534 (16%)
Query: 59 RVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVL 118
R+ E L I E + L+ +F DKA +V+ M GF P+ N ++
Sbjct: 94 RIIERLKI--SGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMD 151
Query: 119 AYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC---GKGKMEEAEELLQEMNQKG 175
+ AL I + R N SF+ + FC G+G + + +L+ M +G
Sbjct: 152 VNFKLNVVNGALEIFEGIRFR----NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEG 207
Query: 176 LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAF 235
+ + + ++ L C G V +AF++ M+ GI + + L+ +A
Sbjct: 208 FYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAV 267
Query: 236 DLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVT 295
DLF +M++ G SP+ TYT L+ + +AF + ++ +G PD V
Sbjct: 268 DLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLC------- 320
Query: 296 YNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMD 355
N +IH L R EEA ++ + + L PD ++++++ C
Sbjct: 321 -NLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC---------------- 363
Query: 356 KKSISWLGLWGLYDDIDKSVMQ-GLSHEDTFSNLMSDYLAE-GHLEKAYLLEREINYFDY 413
L G +D + + G + NL+S+ ++ G+ A + ++Y D+
Sbjct: 364 --------LSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDF 415
Query: 414 LPVDVHYSVFLNVLNK-----------KARITEAKHHLLWFISHVCLRMPTFIIYDTLIE 462
Y+V+L+ L + K I E KH F S I D+LIE
Sbjct: 416 ALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSA---------IIDSLIE 466
Query: 463 NCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHK 522
G A R + Y D Y + I R + +
Sbjct: 467 -------------------LGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEE 507
Query: 523 AYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSEL 576
AY + +M G P+ + +I LC + K ++ LR C EL
Sbjct: 508 AYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEK----VRKILRECIQEGVEL 557
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 131/322 (40%), Gaps = 52/322 (16%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
++ LV R G ++A+ + M + + TYTSLI F D G D+A+ V +++
Sbjct: 249 VWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV 308
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G +P + N ++ Y R RF EA + L +R P+ +F +++ C GK
Sbjct: 309 QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF 368
Query: 162 E--------------------------------EAEELLQEMNQKGLALDDKTYTSLIHL 189
+ A ++L M+ K ALD TYT +
Sbjct: 369 DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSA 428
Query: 190 FCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPD 249
C G A +M ++ + DA + +I SL + A LF+ + D
Sbjct: 429 LCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLD 488
Query: 250 NKTYT----GLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCL 305
+YT GL+ A R++ +A+ L +M G P+ TY II GLC
Sbjct: 489 VVSYTVAIKGLVRAKRIE----EAYSLCCDMKEGGIYPN--------RRTYRTIISGLCK 536
Query: 306 LDRAEEALEILRGMPEIGLSPD 327
E+ +ILR + G+ D
Sbjct: 537 EKETEKVRKILRECIQEGVELD 558
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 6/237 (2%)
Query: 29 AWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMA-ESDENTYTSLIHLFCD 87
+T EK K + D+ T+ ++ + C G+ + I G+ + D T L + F
Sbjct: 339 VFTSLEKR--KLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSK 396
Query: 88 QGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS 147
G A KV + M F+ TY + A CR R A+ + + +I+ +
Sbjct: 397 IGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHF 456
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
+A++ GK A L + + LD +YT I ++E+A+ + +M
Sbjct: 457 HSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMK 516
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKT---YTGLMSAYR 261
GI P+ TY +I LC ++ + + +E ++ G+ D T L+S YR
Sbjct: 517 EGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYR 573
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 115/540 (21%), Positives = 222/540 (41%), Gaps = 120/540 (22%)
Query: 3 LLRVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEE 62
L+R ++ + R RVP P+ W L+ C+ G++ E
Sbjct: 33 LVRSIYSSSSRPRVPQPE-----------------W-----------LIGELCKVGKIAE 64
Query: 63 ALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCR 122
A + G+ E D T+T +I + G +A ++F + +D+ +V T+ A+V Y R
Sbjct: 65 ARKLFDGLPERDVVTWTHVITGYIKLGDMREARELF-DRVDS--RKNVVTWTAMVSGYLR 121
Query: 123 DKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKT 182
K+ L I L + E N++S+N ++ G+ G++++A EL EM ++ + +
Sbjct: 122 SKQ----LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV----S 173
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
+ S++ +G+++ EA +LF+ M
Sbjct: 174 WNSMVKALVQRGRID-----------------------------------EAMNLFERMP 198
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
RR D ++T ++ + +A L D M + +++NA+I G
Sbjct: 199 RR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI------------ISWNAMITG 242
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS-ISW 361
+R +EA ++ + MPE D S++T+I GF R RE+ KA L M +K+ ISW
Sbjct: 243 YAQNNRIDEADQLFQVMPE----RDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISW 298
Query: 362 LGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYS 421
+ Y ++ +E+ N+ S L +G ++ N Y+ + S
Sbjct: 299 TTMITGY-------VENKENEEAL-NVFSKMLRDGSVKP--------NVGTYVSILSACS 342
Query: 422 VFLNVLNKK---ARITEAKHHLLWFISHVCLRMPT----FIIYDTLIEN--CSNNEFKSV 472
++ + I+++ H ++ L M + I + +N + S
Sbjct: 343 DLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 473 VGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVH 532
++ + G K+A +++M + +KP Y L+F G V K + + ++V
Sbjct: 403 NSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 202/493 (40%), Gaps = 126/493 (25%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER- 139
LI C G+ +A K+F + + V T+ ++ Y + REA R L +R
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREA----RELFDRV 103
Query: 140 GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKA 199
N++++ A+V G+ ++ AE L QEM ++ + ++ ++I + G+++KA
Sbjct: 104 DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----SWNTMIDGYAQSGRIDKA 159
Query: 200 FEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
E+ EM + I+ ++ ++ +L + + EA +LF+ M RR D ++T ++
Sbjct: 160 LELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDG 211
Query: 260 YRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM 319
+ +A L D M + +++NA+I G +R +EA ++ + M
Sbjct: 212 LAKNGKVDEARRLFDCMPERNI------------ISWNAMITGYAQNNRIDEADQLFQVM 259
Query: 320 PEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS-ISWLGLWGLYDDIDKSVMQG 378
PE D S++T+I GF R RE+ KA L M +K+ ISW
Sbjct: 260 PE----RDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISW----------------- 298
Query: 379 LSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKH 438
+ +++ Y+ E+A LNV +K R K
Sbjct: 299 -------TTMITGYVENKENEEA----------------------LNVFSKMLRDGSVK- 328
Query: 439 HLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEG 498
P Y +++ CS+ + GLV+G + L+ K+ + ++
Sbjct: 329 -------------PNVGTYVSILSACSD-----LAGLVEGQQIHQLISKSVHQKNEIVTS 370
Query: 499 N----YKPDGAV-------------------YNLLIFDHCRCGNVHKAYDMYMEMVHYGF 535
Y G + +N +I + G+ +A +MY +M +GF
Sbjct: 371 ALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGF 430
Query: 536 APHMFSVLALIEA 548
P + L L+ A
Sbjct: 431 KPSAVTYLNLLFA 443
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 157/345 (45%), Gaps = 34/345 (9%)
Query: 1 MKLLRVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADE------TTYNKLVLAC 54
+ + +LF+ V + MI G+A + + L DE ++N +V A
Sbjct: 125 LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALE---LFDEMPERNIVSWNSMVKAL 181
Query: 55 CRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYN 114
+ GR++EA+ + M D ++T+++ G+ D+A ++F M + ++ ++N
Sbjct: 182 VQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWN 237
Query: 115 AIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK 174
A++ Y ++ R EA + + + ER F S+N ++ GF +M +A L M +K
Sbjct: 238 AMITGYAQNNRIDEADQLFQVMPERDF----ASWNTMITGFIRNREMNKACGLFDRMPEK 293
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKG-ILPDADTYGPLIGSLCLQQTLSE 233
+ ++T++I + + E+A + ++M+ G + P+ TY ++ + L E
Sbjct: 294 NVI----SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 234 AFDLFQEMLRRGLSPDNKTYT-GLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTS 292
+ Q ++ + + N+ T L++ Y + A +M G +
Sbjct: 350 GQQIHQ-LISKSVHQKNEIVTSALLNMYSKSGELIAA----RKMFDNGLV------CQRD 398
Query: 293 HVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
+++N++I +EA+E+ M + G P AV+Y ++F
Sbjct: 399 LISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFA 443
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 180/428 (42%), Gaps = 60/428 (14%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D+T L+ + R G+ E ALG+L M E + + Y S++ + + A +
Sbjct: 126 DQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSIL 185
Query: 99 AEMI---------DTG------FSPSVATYNAIVLAYCR-DKR--FREALGILRCLIERG 140
+++ DTG + P N +++ R D R F+ L+ + +
Sbjct: 186 FKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGM--KR 243
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKG------LALDDKTYTSLIHLFCNKG 194
F+ + S+N + GF G ++ A L +EM ++ D TY SLIH+ C G
Sbjct: 244 FKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFG 303
Query: 195 KVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYT 254
K + A + E+ G PD TY LI C + +A ++ EM G PD Y
Sbjct: 304 KAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYN 363
Query: 255 GLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALE 314
L+ + ++A L ++M+ +G + S TYN +I GL RAE
Sbjct: 364 CLLDGTLKARKVTEACQLFEKMVQEG--------VRASCWTYNILIDGLFRNGRAEAGFT 415
Query: 315 ILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK-------SISWL----- 362
+ + + G DA+++S V CR +L A KL EM+ + +IS L
Sbjct: 416 LFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFH 475
Query: 363 --GLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHY 420
G W + + K + +G NL+ + L +A L + DY P+
Sbjct: 476 KQGRWDWKEKLMKHIREG--------NLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSK 527
Query: 421 SVFLNVLN 428
FL++++
Sbjct: 528 GSFLDIMS 535
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 108/238 (45%), Gaps = 9/238 (3%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
LA + K + R RVE D + + + ++ +G A K+F
Sbjct: 566 LAHQRNQPKPLFGLARGQRVEAKPDSF------DVDMMNTFLSIYLSKGDLSLACKLFEI 619
Query: 101 MIDTGFSPSVA-TYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
G + + TYN+++ ++ + F+ A G+L + E ++ ++N ++QG G
Sbjct: 620 FNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMG 679
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ + A +L + ++G LD Y +LI+ ++++A ++ M GI PD +Y
Sbjct: 680 RADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYN 739
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL--MSAYRLQAQFSKAFHLQDE 275
+I L EA+ + ML G P++ T T L + +A+F KA ++++
Sbjct: 740 TMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDYLGKEMEKARFKKASFVRNK 797
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 11/179 (6%)
Query: 37 NWKGLADET--TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQ 90
N G+ D T TYN ++ + + G + A G+L M E +D TY +I G+
Sbjct: 621 NGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGR 680
Query: 91 CDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNA 150
D A V + G + YN ++ A + R EA + + G P+++S+N
Sbjct: 681 ADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNT 740
Query: 151 LVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK-VEKAFEMKAEMVH 208
+++ GK++EA + L+ M G + T T L +L GK +EKA KA V
Sbjct: 741 MIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDYL----GKEMEKARFKKASFVR 795
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%)
Query: 147 SFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEM 206
++N+++ F KG + A +L +M + A D TY +I G+ + A + +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 207 VHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF 266
+G D Y LI +L L EA LF M G++PD +Y ++ +
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 267 SKAFHLQDEMIHKGFLPDFVT 287
+A+ M+ G LP+ VT
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVT 772
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 20/267 (7%)
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
G+ S Y+ I CR E +L + E G + L+ GK E A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI-- 222
+L M + G L+ Y S++ K ++ A + +++ D G +I
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIV 206
Query: 223 ----GSLCLQQTL---------SEAFDLFQEM--LRRGLSPDNKTYTGLMSAYRLQAQFS 267
G++ + + L SE +F+++ ++R D +Y + +
Sbjct: 207 SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKR-FKFDTWSYNICIHGFGCWGDLD 265
Query: 268 KAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPD 327
A L EM + + + + TYN++IH LCL +A++AL + + G PD
Sbjct: 266 AALSLFKEMKERSSV--YGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPD 323
Query: 328 AVSYSTVIFGFCRIRELGKAYKLKVEM 354
+Y +I G C+ + A ++ EM
Sbjct: 324 NSTYRILIQGCCKSYRMDDAMRIYGEM 350
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 126/254 (49%), Gaps = 21/254 (8%)
Query: 43 DETTYNKLVLACCRDGRVEEAL----GILRGMAESDENTYTSLIHLFCDQGQCDKAYKVF 98
D N ++ C G V EA I+ D +Y ++I+ +G+ KA +++
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M DT +P V N ++ A C KR EAL + R + E+G +PN++++N+L++ C
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 159 GKMEEAEELLQEMNQKG--LALDDKTYTSLIHLFCNKGK-----VEKAFEMKAEMVHKGI 211
+ E+ EL++EM KG + +D T++ L+ + + K +E+ + K EM
Sbjct: 366 RRTEKVWELVEEMELKGGSCSPNDVTFSYLLK-YSQRSKDVDIVLERMAKNKCEMT---- 420
Query: 212 LPDADTYGPLIGSLCLQQTLSEAF-DLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAF 270
+D Y L+ L +Q E +++ EM R GL PD +TYT + + + +A
Sbjct: 421 ---SDLYN-LMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEAL 476
Query: 271 HLQDEMIHKGFLPD 284
EM+ KG +P+
Sbjct: 477 SYFQEMMSKGMVPE 490
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 146/349 (41%), Gaps = 31/349 (8%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYK 96
L+ YN+++ + R EE + M++ D E TY L++ + + D+A
Sbjct: 140 LSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVG 199
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
VF + G + ++ +++ CR K E L C R F ++ + N ++ G+C
Sbjct: 200 VFERRKEFGIDDDLVAFHGLLMWLCRYKHV-EFAETLFCSRRREFGCDIKAMNMILNGWC 258
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
G + EA+ +++ D +Y ++I+ KGK+ KA E+ M PD
Sbjct: 259 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 318
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
+I +LC ++ + EA ++F+E+ +G P+ TY L+ + K + L +EM
Sbjct: 319 ICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM 378
Query: 277 IHKG--FLPDFVT------------------------GISTSHVTYNAIIHGLCLLDRAE 310
KG P+ VT + YN + D+ E
Sbjct: 379 ELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEE 438
Query: 311 EALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
+ EI M GL PD +Y+ I G ++G+A EM K +
Sbjct: 439 KVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM 487
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 129/327 (39%), Gaps = 47/327 (14%)
Query: 40 GLADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAY 95
G +E TY L+ +V+EA+G+ E D + L+ C + A
Sbjct: 174 GFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAE 233
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
+F F + N I+ +C EA + +I P+++S+ ++
Sbjct: 234 TLFCSR-RREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINAL 292
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
KGK+ +A EL + M D K ++I C K ++ +A E+ E+ KG P+
Sbjct: 293 TKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNV 352
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRG--LSPDNKTYTGLMS--------------- 258
TY L+ LC + + ++L +EM +G SP++ T++ L+
Sbjct: 353 VTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERM 412
Query: 259 --------------AYRLQAQFSKAFHLQD---EMIHKGFLPDFVTGISTSHVTYNAIIH 301
+RL Q+ K +++ EM G PD TY IH
Sbjct: 413 AKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPD--------QRTYTIRIH 464
Query: 302 GLCLLDRAEEALEILRGMPEIGLSPDA 328
GL + EAL + M G+ P+
Sbjct: 465 GLHTKGKIGEALSYFQEMMSKGMVPEP 491
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 143/321 (44%), Gaps = 53/321 (16%)
Query: 49 KLVLACCRDGRV-EEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMID 103
++VL C + +EAL +LR E +D Y +I LF D+G + A + EM
Sbjct: 134 RIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEM-- 191
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEE 163
C+ G P++I++ +++ G+C GK+++
Sbjct: 192 ------------------------------DCV---GLYPDVITYTSMINGYCNAGKIDD 218
Query: 164 AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKG----ILPDADTYG 219
A L +EM++ L+ TY+ ++ C G +E+A E+ AEM + I P+A TY
Sbjct: 219 AWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYT 278
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAF-HLQDEMIH 278
+I + C ++ + EA + M RG P+ T L+ + KA L D+++
Sbjct: 279 LVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVK 338
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
G G+S S +A + L + R EEA +I R M G+ PD ++ S V
Sbjct: 339 LG-------GVSLSECFSSATV-SLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFREL 390
Query: 339 CRIRELGKAYKLKVEMDKKSI 359
C + + L E++KK +
Sbjct: 391 CLLERYLDCFLLYQEIEKKDV 411
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 117/248 (47%), Gaps = 11/248 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKVF 98
D TY ++ C G++++A + + M++ D TY+ ++ C G ++A ++
Sbjct: 199 DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELL 258
Query: 99 AEM--IDTG--FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
AEM D G SP+ TY ++ A+C +R EAL +L + RG PN ++ L+QG
Sbjct: 259 AEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318
Query: 155 FCGKGKMEEA-EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
+ +A +L+ ++ + G + ++S + E+A ++ M+ +G+ P
Sbjct: 319 VLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRP 378
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP--DNKTYTGLMSAYRLQAQFSKAFH 271
D + LCL + + F L+QE+ ++ + D+ + L+ Q +A
Sbjct: 379 DGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAK 438
Query: 272 LQDEMIHK 279
L M+ K
Sbjct: 439 LAKSMLDK 446
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 136/292 (46%), Gaps = 8/292 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
D +N L+ C++ + +A + + + + L ++A F EM
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMK 238
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
G P V TYN+++ YC+D+ +A ++ + E P++I++ ++ G G+ +
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
+A E+L+EM + G D Y + I FC ++ A ++ EMV KG+ P+A TY
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
L L L +++L+ ML P+ ++ L+ ++ + A L ++M+ KGF
Sbjct: 359 RVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF- 417
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
+ + + ++ LC L + EEA + L M E G P VS+ +
Sbjct: 418 -------GSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 39 KGL-ADETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDK 93
KGL D TYN L+ C+D +E+A ++ M E +E TYT++I GQ DK
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A +V EM + G P VA YNA + +C +R +A ++ ++++G PN ++N +
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFR 359
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
+ + EL M + ++ LI +F KV+ A + +MV KG
Sbjct: 360 VLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGS 419
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
+ L+ LC + EA EM+ +G P N ++
Sbjct: 420 YSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 459
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 88/183 (48%), Gaps = 12/183 (6%)
Query: 178 LDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDL 237
D + +L+ C + + A + + H+ PD T+ L+ ++ EA
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW---KSSEEAEAF 233
Query: 238 FQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYN 297
F+EM +GL PD TY L+ Y + KA+ L D+M + PD +T Y
Sbjct: 234 FEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVIT--------YT 285
Query: 298 AIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
+I GL L+ + ++A E+L+ M E G PD +Y+ I FC R LG A KL EM KK
Sbjct: 286 TVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
Query: 358 SIS 360
+S
Sbjct: 346 GLS 348
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 110/270 (40%), Gaps = 49/270 (18%)
Query: 85 FCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPN 144
C Q +++ F ++ F A +NA++ C++K +A + L + F+P+
Sbjct: 157 LCSVRQTVESFWKFKRLVPDFFD--TACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPD 213
Query: 145 LISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKA 204
L +FN L+ G+ E+A
Sbjct: 214 LQTFNILLSGW--------------------------------------KSSEEAEAFFE 235
Query: 205 EMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQA 264
EM KG+ PD TY LI C + + +A+ L +M +PD TYT ++ L
Sbjct: 236 EMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIG 295
Query: 265 QFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGL 324
Q KA + EM G PD YNA I C+ R +A +++ M + GL
Sbjct: 296 QPDKAREVLKEMKEYGCYPDVAA--------YNAAIRNFCIARRLGDADKLVDEMVKKGL 347
Query: 325 SPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
SP+A +Y+ +LG++++L V M
Sbjct: 348 SPNATTYNLFFRVLSLANDLGRSWELYVRM 377
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 83/136 (61%)
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEEL 167
P+ TYN+++ +C+ R +A +L + +G P++++F+ L+ G+C +++ E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 168 LQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCL 227
EM+++G+ + TYT+LIH FC G ++ A ++ EM+ G+ PD T+ ++ LC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 228 QQTLSEAFDLFQEMLR 243
++ L +AF + +++ +
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 77/134 (57%)
Query: 143 PNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEM 202
P I++N+++ GFC + ++++A+ +L M KG + D T+++LI+ +C +V+ E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 203 KAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRL 262
EM +GI+ + TY LI C L A DL EM+ G++PD T+ +++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 263 QAQFSKAFHLQDEM 276
+ + KAF + +++
Sbjct: 128 KKELRKAFAILEDL 141
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TY S+I FC Q + D A ++ M G SP V T++ ++ YC+ KR + I +
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
RG N +++ L+ GFC G ++ A++LL EM G+A D T+ ++ C+K ++
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 197 EKAFEM 202
KAF +
Sbjct: 132 RKAFAI 137
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQ 265
M+ I P TY +I C Q + +A + M +G SPD T++ L++ Y +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 266 FSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLS 325
+ EM +G I + VTY +IHG C + + A ++L M G++
Sbjct: 61 VDNGMEIFCEMHRRG--------IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
Query: 326 PDAVSYSTVIFGFCRIRELGKAYKLKVEMDK 356
PD +++ ++ G C +EL KA+ + ++ K
Sbjct: 113 PDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 182 TYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEM 241
TY S+I FC + +V+ A M M KG PD T+ LI C + + ++F EM
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 242 LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIH 301
RRG+ + TYT L+ + A L +EMI G PD+ +T++ ++
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY--------ITFHCMLA 123
Query: 302 GLCLLDRAEEALEILRGMPE 321
GLC +A IL + +
Sbjct: 124 GLCSKKELRKAFAILEDLQK 143
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 38 WKGLADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDK 93
W TYN ++ C+ RV++A +L MA D T+++LI+ +C + D
Sbjct: 4 WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN 63
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
++F EM G + TY ++ +C+ A +L +I G P+ I+F+ ++
Sbjct: 64 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 123
Query: 154 GFCGKGKMEEAEELLQEMNQ 173
G C K ++ +A +L+++ +
Sbjct: 124 GLCSKKELRKAFAILEDLQK 143
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 288 GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA 347
I + +TYN++I G C DR ++A +L M G SPD V++ST+I G+C+ + +
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 348 YKLKVEMDKKSI 359
++ EM ++ I
Sbjct: 65 MEIFCEMHRRGI 76
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 177/419 (42%), Gaps = 61/419 (14%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D +Y+ ++ A R + +L+GM D T + F +A ++F
Sbjct: 150 DVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELF 209
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP-NLISFNALVQGFCG 157
E G S ++NA++ C A + ++G P + S+N ++ G+
Sbjct: 210 EESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGWSK 267
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
G++EE E++L+EM + G D +Y+ LI G++ + E+ + HKG +PDA+
Sbjct: 268 LGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANV 327
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
Y +I + + E+ ++ ML P+ +TY+ L+S + S A + +EM+
Sbjct: 328 YNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEML 387
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
+G LP TG+ TS + LC A+ I + + G
Sbjct: 388 SRGVLP--TTGLVTS------FLKPLCSYGPPHAAMVIYQKSRKAG-------------- 425
Query: 338 FCRIRELGKAYKLKVEMDKKSISWLGLWGL----YDDIDKSVMQGLSHEDTFSNLMSDYL 393
CRI E AYKL + K +S G G+ +D++ +S S + + ++
Sbjct: 426 -CRISE--SAYKLLL----KRLSRFGKCGMLLNVWDEMQESGYP--SDVEVYEYIVDGLC 476
Query: 394 AEGHLEKAYLLEREINYFDYLP-----------------VDVHYSVFLNVLNKKARITE 435
GHLE A L+ E + P ++ Y +FL + KKAR TE
Sbjct: 477 IIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKI--KKARATE 533
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 127/294 (43%), Gaps = 18/294 (6%)
Query: 40 GLADETTYNKLVLACCRDGRVEEA----LG---ILRGMAESDENTYTSLIHLFCDQGQCD 92
L DET++ LV A C V EA G I G + S+ + ++ + G
Sbjct: 147 NLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWG 206
Query: 93 KAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALV 152
K + + +M G + + +Y+ + C+ + +A+ + + + R + +++++N ++
Sbjct: 207 KCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVI 266
Query: 153 QGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL 212
+ +E + +EM ++G + T+ ++I L C G++ A+ M EM +G
Sbjct: 267 RAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQ 326
Query: 213 PDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHL 272
PD+ TY L L + SE LF M+R G+ P TY LM + ++
Sbjct: 327 PDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYV 383
Query: 273 QDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSP 326
M G PD YNA+I L + A E M E GLSP
Sbjct: 384 WKTMKESGDTPD--------SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 14/290 (4%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVF--AEMIDTGFSPS-VATYNAIVLAYCRDKRFREAL 130
DE ++ +L+ C+ +A ++ +I GFS S +N I+ + + + +
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 209
Query: 131 GILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLF 190
+ + G +L S++ + C GK +A +L +EM + + LD Y ++I
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 191 CNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDN 250
VE + EM +G P+ T+ +I LC + +A+ + EM +RG PD+
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 251 KTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAE 310
TY L S RL+ S+ L MI G P TY ++ +
Sbjct: 330 ITYMCLFS--RLEKP-SEILSLFGRMIRSGVRPKM--------DTYVMLMRKFERWGFLQ 378
Query: 311 EALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
L + + M E G +PD+ +Y+ VI + L A + + EM ++ +S
Sbjct: 379 PVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLS 428
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 9/230 (3%)
Query: 93 KAYKVFAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
+A +V+ EM G P + TYN ++ +C + I+ + +G +PN SF +
Sbjct: 169 EAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLM 228
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
+ GF + K +E ++L M +G+ + TY I C + K ++A + M+ G+
Sbjct: 229 ISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM 288
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
P+ TY LI C + EA LF+ M+ RG PD++ Y L+ F A
Sbjct: 289 KPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALS 348
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPE 321
L E + K ++P F ++++GL + EEA E++ + E
Sbjct: 349 LCKESMEKNWVPSF--------SIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 5/239 (2%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA-----ESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
+ N L+ AC +EA + M E D TY +I +FC+ G +Y + AE
Sbjct: 153 SLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAE 212
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M G P+ +++ ++ + + + E +L + +RG + ++N +Q C + K
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+EA+ LL M G+ + TY+ LIH FCN+ E+A ++ MV++G PD++ Y
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT 332
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
LI LC A L +E + + P L++ ++ +A L ++ K
Sbjct: 333 LIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 15/289 (5%)
Query: 82 IHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER-- 139
I L+ D + +VF ++ S +V + NA++ A K ++EA R IE
Sbjct: 123 IVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEA---KRVYIEMPK 179
Query: 140 --GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
G EP+L ++N +++ FC G + ++ EM +KG+ + ++ +I F + K +
Sbjct: 180 MYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD 239
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
+ ++ A M +G+ TY I SLC ++ EA L ML G+ P+ TY+ L+
Sbjct: 240 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
+ + F +A L M+++G PD Y +I+ LC E AL + +
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGCKPD--------SECYFTLIYYLCKGGDFETALSLCK 351
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWG 366
E P +++ G + ++ +A +L ++ +K + LW
Sbjct: 352 ESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWN 400
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 18/271 (6%)
Query: 114 NAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQ 173
+AIVL Y + +L + R L + + S NAL+ +EA+ + EM +
Sbjct: 121 HAIVL-YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPK 179
Query: 174 K-GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLS 232
G+ D +TY +I +FC G ++ + AEM KGI P++ ++G +I +
Sbjct: 180 MYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD 239
Query: 233 EAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTS 292
E + M RG++ TY + + + + +A L D M+ G P+
Sbjct: 240 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPN-------- 291
Query: 293 HVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL-K 351
VTY+ +IHG C D EEA ++ + M G PD+ Y T+I+ C+ + A L K
Sbjct: 292 TVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCK 351
Query: 352 VEMDKKSISWLGLWGLYDDIDKSVMQGLSHE 382
M+K +W+ + I KS++ GL+ +
Sbjct: 352 ESMEK---NWVPSFS----IMKSLVNGLAKD 375
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+F M ++ A YN I+ C+ +F EA I L+ G +P++ ++N +++ F
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
G+ AE+L EM ++GL D TY S+IH C + K+ +A + +
Sbjct: 60 SLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
T+ LI C + + +LF EM RRG+ + TYT L+ +R F+ A + EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
+ G+ +S +T+ I+ LC +A+ +L
Sbjct: 168 VSN--------GVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D YN ++ C+ G+ +EA I + + D TY +I F G +A K++
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLG---RAEKLY 68
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
AEMI G P TYN+++ C+ + +A R + +FN L+ G+C
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKA 119
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
++++ L EM ++G+ + TYT+LIH F G A ++ EMV G+ + T+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 219 GPLIGSLCLQQTLSEAFDLF 238
++ LC ++ L +A +
Sbjct: 180 RDILPQLCSRKELRKAVAML 199
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D Y +IH C G+ D+A +F ++ +G P V TYN ++ R A +
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+I RG P+ I++N+++ G C + K+ +A ++ + + T+ +LI+ +C
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS---------TFNTLINGYCKA 119
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
+V+ + EM +GI+ + TY LI + A D+FQEM+ G+ + T+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 254 TGLMSAYRLQAQFSKAFHL 272
++ + + KA +
Sbjct: 180 RDILPQLCSRKELRKAVAM 198
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+ + + E + + +N ++ G C GK +EA + + GL D +TY +I F
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
+ G+ EK + AEM+ +G++PD TY +I LC Q L++A R +S
Sbjct: 60 SLGRAEKLY---AEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
T+ L++ Y + +L EM +G + + +T Y +IHG +
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVIT--------YTTLIHGFRQVGDFNT 159
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVE 353
AL+I + M G+ ++++ ++ C +EL KA + ++
Sbjct: 160 ALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 167 LLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLC 226
+ + M + + +D Y +IH C GK ++A + ++ G+ PD TY +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 227 LQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFV 286
+L A L+ EM+RRGL PD TY ++ Q + ++A
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA----------------- 99
Query: 287 TGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGK 346
+S S T+N +I+G C R ++ + + M G+ + ++Y+T+I GF ++ +
Sbjct: 100 RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNT 159
Query: 347 AYKLKVEM 354
A + EM
Sbjct: 160 ALDIFQEM 167
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 20 DVMIRGFAAAWTETEKTNW------KGL-ADETTYNKLVLACCRDGRVEE--ALGILRGM 70
+++I G A E N GL D TYN +++ GR E+ A I RG+
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYN-MMIRFSSLGRAEKLYAEMIRRGL 76
Query: 71 AESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREAL 130
D TY S+IH C Q + +A KV S S +T+N ++ YC+ R ++ +
Sbjct: 77 VP-DTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVKDGM 126
Query: 131 GILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLF 190
+ + RG N+I++ L+ GF G A ++ QEM G+ T+ ++
Sbjct: 127 NLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQL 186
Query: 191 CNKGKVEKAFEM---KAEMVHKGI 211
C++ ++ KA M K+ MV +
Sbjct: 187 CSRKELRKAVAMLLQKSSMVSNNV 210
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 21/278 (7%)
Query: 58 GRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIV 117
GR A L+ + D SL+ ++ GQ A++VF E D S+ +N ++
Sbjct: 145 GRALHA-ATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLI 203
Query: 118 LAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLA 177
YCR K A + R + ER N S++ L++G+ G++ A++L + M +K +
Sbjct: 204 NGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV 259
Query: 178 LDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDL 237
++T+LI+ F G E A EM+ KG+ P+ T ++ + L +
Sbjct: 260 ----SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI 315
Query: 238 FQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYN 297
+L G+ D T L+ Y + A + M HK L ++
Sbjct: 316 HGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDIL------------SWT 363
Query: 298 AIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
A+I G + R +A++ R M G PD V + V+
Sbjct: 364 AMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 129/288 (44%), Gaps = 18/288 (6%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGF 106
+N L+ CR + A + R M E + ++++LI + D G+ ++A ++F M +
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK-- 256
Query: 107 SPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEE 166
+V ++ ++ + + + A+ ++E+G +PN + A++ G +
Sbjct: 257 --NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIR 314
Query: 167 LLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLC 226
+ + G+ LD T+L+ ++ G+++ A + + M HK IL ++ +I
Sbjct: 315 IHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDIL----SWTAMIQGWA 370
Query: 227 LQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFV 286
+ +A F++M+ G PD + +++A ++ + D M D+
Sbjct: 371 VHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM-----RLDYA 425
Query: 287 TGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
+ H Y ++ L + EA E++ MP ++PD +++ +
Sbjct: 426 IEPTLKH--YVLVVDLLGRAGKLNEAHELVENMP---INPDLTTWAAL 468
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 103/243 (42%), Gaps = 8/243 (3%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTG 105
+++ L+ G + A + M E + ++T+LI+ F G + A + EM++ G
Sbjct: 229 SWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKG 288
Query: 106 FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
P+ T A++ A + + I +++ G + + ALV + G+++ A
Sbjct: 289 LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAA 348
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSL 225
+ MN K D ++T++I + G+ +A + +M++ G PD + ++ +
Sbjct: 349 TVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 226 CLQQTLSEAFDLFQEM-LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
+ + F M L + P K Y ++ + ++A L + M PD
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENM---PINPD 461
Query: 285 FVT 287
T
Sbjct: 462 LTT 464
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 17/237 (7%)
Query: 39 KGLADETTYNKLVLACCRDGRVEEALGILRGMAESDE-------NTYTSLIHLFCDQGQ- 90
+ + +E YN ++ + G++ A+ I R M S TY L +G
Sbjct: 202 RHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNN 261
Query: 91 -------CDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL-IERGFE 142
+ +F +M+D+G P V N +V Y +AL I + + E
Sbjct: 262 SYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCE 321
Query: 143 PNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEM 202
PN +++ L+ G C +G+ A ELL EM KG + K+Y SL++ F G+++ A +
Sbjct: 322 PNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKC 381
Query: 203 KAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
EM+ G + D +Y L+ C + EA L EMLR D +Y L++
Sbjct: 382 LWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL-EMLREKQLVDRDSYDKLVNV 437
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 105/262 (40%), Gaps = 53/262 (20%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTG---FSPSVATYNAIVLA--------YCR 122
+EN Y S+I F G+ +A +F M+ + P++ TY+ + A Y
Sbjct: 206 NENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYIN 265
Query: 123 DKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKT 182
+ R +++ G EP++ + N LV+G+ + +A + +M+ + D
Sbjct: 266 HVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMS---VVYD--- 319
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
C P++ TY LI LC Q A +L EM
Sbjct: 320 --------CE--------------------PNSFTYDYLIHGLCAQGRTINARELLSEMK 351
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
+G P+ K+Y L++A+ L + A EMI G + DF ++Y ++
Sbjct: 352 GKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF--------ISYRTLVDE 403
Query: 303 LCLLDRAEEALEILRGMPEIGL 324
C + +EA +L + E L
Sbjct: 404 SCRKGKYDEATRLLEMLREKQL 425
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 19/210 (9%)
Query: 157 GKGKM-EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL--- 212
G KM +E ++++ ++ ++ Y S+I F GK+ +A + MV L
Sbjct: 183 GAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECR 242
Query: 213 PDADTYGPLIGSLCLQQT--------LSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQA 264
P TY L +L + + LF++M+ G+ PD L+ Y L
Sbjct: 243 PTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSL 302
Query: 265 QFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGL 324
+ A + +M V + TY+ +IHGLC R A E+L M G
Sbjct: 303 HVNDALRIFHQM-------SVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGF 355
Query: 325 SPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
P+ SY++++ F E+ A K EM
Sbjct: 356 VPNGKSYNSLVNAFALSGEIDDAVKCLWEM 385
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 39/242 (16%)
Query: 113 YNAIVLAYCRDKRFREALGILRCLI-ERGFE--PNLISFNALVQGFCGKGKMEEAEELLQ 169
YN+I+ + + + A+ I R ++ + E P + +++ L + G+G
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRG---------- 259
Query: 170 EMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQ 229
+ +Y + +++ E + +MV GI PD L+ L
Sbjct: 260 ----------NNSYINHVYM-------ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSL 302
Query: 230 TLSEAFDLFQEM-LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTG 288
+++A +F +M + P++ TY L+ Q + A L EM KGF+P+ G
Sbjct: 303 HVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPN---G 359
Query: 289 ISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY 348
S YN++++ L ++A++ L M E G D +SY T++ CR + +A
Sbjct: 360 KS-----YNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEAT 414
Query: 349 KL 350
+L
Sbjct: 415 RL 416
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 115/224 (51%), Gaps = 8/224 (3%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGI---LRGMAESDENTYTSLIHLFCDQGQCDKAYKV 97
L + T N+ V C++ VEEA + L+ + DE TY ++I FCD G +A K+
Sbjct: 178 LYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKL 237
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI-ERGFEPNLISFNALVQGFC 156
+ M+D GF + I+ + +F EA + ++ +RG + + + ++ C
Sbjct: 238 WNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLC 297
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
G+++ A ++ EM ++G+ +D+ T+ SLI+ K +V +A+ + E V PD
Sbjct: 298 KNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGL-VEGVEN---PDIS 353
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
Y LI L + SEA ++F++M++RG P TY L+ +
Sbjct: 354 IYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGH 397
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 120/265 (45%), Gaps = 10/265 (3%)
Query: 24 RGFAAAWTETEKTNWKGLADETTYNKLV--LACCRD-GRVEEALGILRGMAE-SDENTYT 79
R W ++ +GL ++ T+ ++ LA R+ + ++ G + T
Sbjct: 126 RNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMN 185
Query: 80 SLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER 139
+ C + ++A VF ++ + P TY ++ +C EA + +++
Sbjct: 186 RGVETLCKEKLVEEAKFVFIKLKEF-IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDE 244
Query: 140 GFEPNLISFNALVQGFCGKGKMEEAEELLQEM-NQKGLALDDKTYTSLIHLFCNKGKVEK 198
GF+ ++ + +++ K + +EA ++ M +++G LD Y +I C G+++
Sbjct: 245 GFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDM 304
Query: 199 AFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
A ++ EM +G+ D T+ LI L +++ + EA+ L + + +PD Y GL+
Sbjct: 305 ARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGV----ENPDISIYHGLIK 360
Query: 259 AYRLQAQFSKAFHLQDEMIHKGFLP 283
+ S+A + +MI +G P
Sbjct: 361 GLVKIKRASEATEVFRKMIQRGCEP 385
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 40 GLADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAY 95
G D Y ++ C++GR++ A + M E D T+ SLI+ + + +AY
Sbjct: 282 GDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAY 341
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
+++ +P ++ Y+ ++ + KR EA + R +I+RG EP + ++ L+QG
Sbjct: 342 G----LVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGH 397
Query: 156 CGK-----------------------GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCN 192
G+ GK E + ++ ++GL + Y+ +H + N
Sbjct: 398 LGRRGRKGPDPLVNFDTIFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSKFLHYYSN 457
Query: 193 KGKVEKAFEMKAEMVHKGILPDADTY 218
+ V EM ++ + AD +
Sbjct: 458 EEGVVMFEEMAKKLREVSLFDLADIF 483
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESD---ENTYTSLIHLFCDQGQCDKAYKVFA 99
+E T L+ R +++EA + ES ++ S+I + G + AY +F
Sbjct: 669 EEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFM 728
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
E + G P T + +V A + REA I R +E+ E + + +N L++ G
Sbjct: 729 ESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAG 788
Query: 160 KMEEAEELLQEMN-----------------------------------QKGLALDDKTYT 184
K++ A E+ + M+ + GL LD+K YT
Sbjct: 789 KLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYT 848
Query: 185 SLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRR 244
++I + GK+ +A + +EM KGI P +Y ++ + E +L Q M R
Sbjct: 849 NMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERN 908
Query: 245 GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLC 304
G D TY L+ Y +QF++A + KG I SH +++++ L
Sbjct: 909 GRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKG--------IPLSHSHFSSLLSALV 960
Query: 305 LLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
EEA M E G+SPD+ T++ G+
Sbjct: 961 KAGMMEEAERTYCKMSEAGISPDSACKRTILKGY 994
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 112/253 (44%), Gaps = 7/253 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D YN L+ A G+++ A I M S TY ++I ++ Q DKA ++F
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIF 832
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+ +G Y +++ Y + + EAL + + ++G +P S+N +V+ C
Sbjct: 833 SNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICAT 891
Query: 159 GKME-EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
++ E +ELLQ M + G D TY +LI ++ + +A + + KGI
Sbjct: 892 SRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSH 951
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
+ L+ +L + EA + +M G+SPD+ ++ Y K ++MI
Sbjct: 952 FSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMI 1011
Query: 278 HKGFLPD-FVTGI 289
D FV+ +
Sbjct: 1012 RSSVEDDRFVSSV 1024
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 198/490 (40%), Gaps = 49/490 (10%)
Query: 93 KAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALV 152
K ++ EM++ G P+ TY +V +Y + EAL + GF P +++++++
Sbjct: 276 KVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVI 335
Query: 153 QGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL 212
G E+A L ++M +G+ + T +++ L+ KA + A+M I
Sbjct: 336 SLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIP 395
Query: 213 PDADTYGPLI---GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKA 269
D G +I G L L +A +F+E R L D KTY + + KA
Sbjct: 396 ADEVIRGLIIRIYGKLGL---FHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKA 452
Query: 270 FHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAV 329
+ + M + I S Y ++ + + A E R + + GL PDA
Sbjct: 453 LDVIEMMKTR--------DIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDAS 503
Query: 330 SYSTVIFGFCRIRELGKAYK------------LKVEMDKKSISWLGLWGLYDDIDKSVMQ 377
S + ++ + R+ LG+ K +E+ K ++ G+ + +++
Sbjct: 504 SCNDMLNLYTRL-NLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVK 562
Query: 378 GLSHEDTFSNLMSDYLAEG-HLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
N LAE H+ + + L V + + LN+ K+ + E
Sbjct: 563 MGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDV-MALGLMLNLRLKEGNLNET 621
Query: 437 KHHL-LWF-----ISHVCLRMPTFI----------IYDTLIENCSNNEFKSVVGLVKGFG 480
K L L F S V + +F+ I D +I E +++ L+ +G
Sbjct: 622 KAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYG 681
Query: 481 MRGLMKKAARAHDRMLEGNYK-PDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHM 539
+ +K+A R + + G K P +V +I + RCG + AY ++ME G P
Sbjct: 682 RQHKLKEAKRLY--LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGA 739
Query: 540 FSVLALIEAL 549
++ L+ AL
Sbjct: 740 VTISILVNAL 749
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
YT ++ L+ G+ A + F EM++ G P ++ Y R R L + +
Sbjct: 190 VYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAV 249
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
ER + +N ++ K + +L EM ++G+ ++ TYT ++ + +G
Sbjct: 250 QERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFK 309
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
E+A + EM G +P+ TY +I +A L+++M +G+ P N T +
Sbjct: 310 EEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATM 369
Query: 257 MSAYRLQAQFSKAFHLQDEM 276
+S Y + KA L +M
Sbjct: 370 LSLYYKTENYPKALSLFADM 389
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 126/650 (19%), Positives = 248/650 (38%), Gaps = 113/650 (17%)
Query: 7 LFKTFLRNRVPPPDVMIRGF--------------AAAWTETEKTNWKGLADETTYNKLVL 52
LF RN++P +V IRG + + ETE+ N LADE TY +
Sbjct: 385 LFADMERNKIPADEV-IRGLIIRIYGKLGLFHDAQSMFEETERLNL--LADEKTYLAMSQ 441
Query: 53 ACCRDGRVEEALGILRGMAESD----ENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSP 108
G V +AL ++ M D Y ++ + D A + F + TG P
Sbjct: 442 VHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-P 500
Query: 109 SVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELL 168
++ N ++ Y R +A G ++ ++ ++ + ++ +C +G + EA++L+
Sbjct: 501 DASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLI 560
Query: 169 QEMNQKGLALDDKTYTSL---IHLFCNKGKVEKAFEM-KAEMVHKGILPD---------- 214
+M ++ D++ +L +H+ K E + + +++ G++ +
Sbjct: 561 VKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNE 620
Query: 215 --------------ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
+ +I S + +S+A + ++R GL + +T L++ Y
Sbjct: 621 TKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVY 680
Query: 261 RLQAQFSKAFHLQ------------------DEMIHKGFLPDFV--------TGISTSHV 294
Q + +A L D + G+L D G V
Sbjct: 681 GRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAV 740
Query: 295 TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
T + +++ L + EA I R E + D V Y+T+I +L A ++ M
Sbjct: 741 TISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERM 800
Query: 355 DKKSI--------SWLGLWGLYDDIDKSV-------MQGLS-HEDTFSNLMSDYLAEGHL 398
+ + + ++G +DK++ GL E ++N++ Y G +
Sbjct: 801 HTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKM 860
Query: 399 EKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISH--VCLRMPTFI- 455
+A L E+ P Y++ + + +R+ LL + C + T++
Sbjct: 861 SEALSLFSEMQKKGIKPGTPSYNMMVKIC-ATSRLHHEVDELLQAMERNGRCTDLSTYLT 919
Query: 456 IYDTLIENCSNNEFKSVVGLVKGFGM----------------RGLMKKAARAHDRMLEGN 499
+ E+ E + + LVK G+ G+M++A R + +M E
Sbjct: 920 LIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAG 979
Query: 500 YKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEAL 549
PD A ++ + CG+ K Y +M+ F V +++E L
Sbjct: 980 ISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRF-VSSVVEDL 1028
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 120/284 (42%), Gaps = 31/284 (10%)
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
++ + P+++ + +++ + GK++ AEE EM + G D +++ + G+
Sbjct: 180 LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRH 239
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+ + IL Y ++ SL + + DL+ EM+ G+ P+ TYT +
Sbjct: 240 SAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLV 299
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
+S+Y Q +A EM GF+P+ VTY+++I E+A+ +
Sbjct: 300 VSSYAKQGFKEEALKAFGEMKSLGFVPE--------EVTYSSVISLSVKAGDWEKAIGLY 351
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISW-----------LGLW 365
M G+ P + +T++ + + KA L +M++ I G
Sbjct: 352 EDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKL 411
Query: 366 GLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREIN 409
GL+ D Q + E NL++D EK YL +++
Sbjct: 412 GLFHD-----AQSMFEETERLNLLAD-------EKTYLAMSQVH 443
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%)
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
+ PSV Y ++ Y + + + A ++E G EP+ ++ ++ + G+
Sbjct: 183 SYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAM 242
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
+ + ++ + L Y ++ K K ++ EMV +G+ P+ TY ++ S
Sbjct: 243 LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSS 302
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
Q EA F EM G P+ TY+ ++S + KA L ++M +G +P
Sbjct: 303 YAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPS 362
Query: 285 FVT 287
T
Sbjct: 363 NYT 365
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 116/553 (20%), Positives = 216/553 (39%), Gaps = 77/553 (13%)
Query: 68 RGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFR 127
R +DE +I ++ G A +F E TY A+ +
Sbjct: 391 RNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVV 450
Query: 128 EALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
+AL ++ + R + ++ ++Q + ++ AEE + +++ GL D + ++
Sbjct: 451 KALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLP-DASSCNDML 509
Query: 188 HLFC--NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
+L+ N G+ K F +K MV + + D + Y + C + ++EA DL +M R
Sbjct: 510 NLYTRLNLGEKAKGF-IKQIMVDQ-VHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREA 567
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCL 305
DN R +++ H+ ++K + V +S V ++ L L
Sbjct: 568 RVKDN----------RFVQTLAESMHI----VNKHDKHEAVLNVSQLDVMALGLMLNLRL 613
Query: 306 LD-RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA-------YKLKVEMDKK 357
+ E IL M + L AV + VI F R ++ KA +L + M+++
Sbjct: 614 KEGNLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADIIIRLGLRMEEE 671
Query: 358 SISWL-GLWG----------LYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLER 406
+I+ L ++G LY +S G S +++ Y+ G LE AY L
Sbjct: 672 TIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKS---VIRSMIDAYVRCGWLEDAYGLFM 728
Query: 407 EINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPT---FIIYDTLIE- 462
E P V S+ +N L + + EA+H IS CL + Y+TLI+
Sbjct: 729 ESAEKGCDPGAVTISILVNALTNRGKHREAEH-----ISRTCLEKNIELDTVGYNTLIKA 783
Query: 463 ----------------------NCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNY 500
CS + +++ V G G++ + KA
Sbjct: 784 MLEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS-VYGRGLQ--LDKAIEIFSNARRSGL 840
Query: 501 KPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSW 560
D +Y +I + + G + +A ++ EM G P S +++ R ++++
Sbjct: 841 YLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDE 900
Query: 561 VIQNTLRSCNLND 573
++Q R+ D
Sbjct: 901 LLQAMERNGRCTD 913
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 135/302 (44%), Gaps = 15/302 (4%)
Query: 45 TTYNKLVLACC-RDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFA 99
T YN + R G EEA+ + + M + TY +I+L+ + ++K++
Sbjct: 251 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYC 310
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
EM P++ TY A+V A+ R+ +A I L E G EP++ +NAL++ + G
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
A E+ M G D +Y ++ + G A + EM GI P ++
Sbjct: 371 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 430
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
L+ + + +++ + +EM G+ PD +++ Y QF+K + EM +
Sbjct: 431 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 490
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLC-LLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
D IST ++ N I+G L+R EE L+ E PD V++++ I +
Sbjct: 491 PCTAD----ISTYNILIN--IYGKAGFLERIEELFVELK---EKNFRPDVVTWTSRIGAY 541
Query: 339 CR 340
R
Sbjct: 542 SR 543
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 6/260 (2%)
Query: 43 DETTYNKLVLACCRDGR---VEEALGILRGMA-ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D YN L+ + R G E +++ M E D +Y ++ + G A VF
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM G +P++ ++ ++ AY + + + I++ + E G EP+ N+++ +
Sbjct: 415 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 474
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G+ + E++L EM D TY LI+++ G +E+ E+ E+ K PD T+
Sbjct: 475 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 534
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
IG+ ++ + ++F+EM+ G +PD T L+SA + Q + + M H
Sbjct: 535 TSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-H 593
Query: 279 KGF-LPDFVTGISTSHVTYN 297
KG + V + +T N
Sbjct: 594 KGVTVSSLVPKLMAKSLTVN 613
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 112/278 (40%), Gaps = 43/278 (15%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TYT+L++ F +G C+KA ++F ++ + G P V YNA++ +Y R A I +
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
G EP+ S+N +V + G +AE + +EM + G+A K++ L+ + V
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442
Query: 197 EKAFEMKAEMVHKGILPDA-----------------------------------DTYGPL 221
K + EM G+ PD TY L
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 502
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I L +LF E+ + PD T+T + AY + + K + +EMI G
Sbjct: 503 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 562
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM 319
PD T ++ ++ E+ +LR M
Sbjct: 563 APDGGTA--------KVLLSACSSEEQVEQVTSVLRTM 592
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 157/375 (41%), Gaps = 56/375 (14%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D +N L+ A + + +EA + + ES E+TY LI +C G ++A V
Sbjct: 176 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 235
Query: 99 AEMIDTGFSPS---VATYNAIVLAYCRDK-RFREALGIL------RC------------- 135
EM + SP V YNA + + K EA+ + RC
Sbjct: 236 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 295
Query: 136 ----------------LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD 179
+ +PN+ ++ ALV F +G E+AEE+ +++ + GL D
Sbjct: 296 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 355
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQ 239
Y +L+ + G A E+ + M H G PD +Y ++ + S+A +F+
Sbjct: 356 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 415
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
EM R G++P K++ L+SAY +K + EM G PD N++
Sbjct: 416 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD--------TFVLNSM 467
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS- 358
++ L + + +IL M + D +Y+ +I + + L + +L VE+ +K+
Sbjct: 468 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 527
Query: 359 ----ISWLGLWGLYD 369
++W G Y
Sbjct: 528 RPDVVTWTSRIGAYS 542
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 184/460 (40%), Gaps = 56/460 (12%)
Query: 132 ILRC---LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
IL C L + F+P++I FN L+ + K + +EAE L ++ + + TY LI
Sbjct: 161 ILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIK 220
Query: 189 LFCNKGKVEKAFEMKAEMVHKGILPDA---DTYGPLIGSLCLQQ-TLSEAFDLFQEMLRR 244
+C G +E+A + EM + + P Y I L ++ EA D+FQ M R
Sbjct: 221 AYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD 280
Query: 245 GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLC 304
P +TY +++ Y ++ ++ L EM P+ T Y A+++
Sbjct: 281 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT--------YTALVNAFA 332
Query: 305 LLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY----------KLKVEM 354
E+A EI + E GL PD Y+ ++ + R G Y + E
Sbjct: 333 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA---GYPYGAAEIFSLMQHMGCEP 389
Query: 355 DKKS----ISWLGLWGLYDDIDKSV--MQGLSHEDTFSN---LMSDYLAEGHLEKAYLLE 405
D+ S + G GL+ D + M+ L T + L+S Y + K +
Sbjct: 390 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 449
Query: 406 REINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR-MPTFIIYDTLIENC 464
+E++ P + LN+ + + T+ + L + C + T+ I
Sbjct: 450 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI-------- 501
Query: 465 SNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAY 524
L+ +G G +++ + E N++PD + I + R K
Sbjct: 502 ----------LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCL 551
Query: 525 DMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQN 564
+++ EM+ G AP + L+ A + +++ V++
Sbjct: 552 EVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRT 591
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 135/302 (44%), Gaps = 15/302 (4%)
Query: 45 TTYNKLVLACC-RDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFA 99
T YN + R G EEA+ + + M + TY +I+L+ + ++K++
Sbjct: 229 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYC 288
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
EM P++ TY A+V A+ R+ +A I L E G EP++ +NAL++ + G
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
A E+ M G D +Y ++ + G A + EM GI P ++
Sbjct: 349 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 408
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
L+ + + +++ + +EM G+ PD +++ Y QF+K + EM +
Sbjct: 409 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 468
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLC-LLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
D IST ++ N I+G L+R EE L+ E PD V++++ I +
Sbjct: 469 PCTAD----ISTYNILIN--IYGKAGFLERIEELFVELK---EKNFRPDVVTWTSRIGAY 519
Query: 339 CR 340
R
Sbjct: 520 SR 521
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 6/260 (2%)
Query: 43 DETTYNKLVLACCRDGR---VEEALGILRGMA-ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D YN L+ + R G E +++ M E D +Y ++ + G A VF
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM G +P++ ++ ++ AY + + + I++ + E G EP+ N+++ +
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G+ + E++L EM D TY LI+++ G +E+ E+ E+ K PD T+
Sbjct: 453 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 512
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
IG+ ++ + ++F+EM+ G +PD T L+SA + Q + + M H
Sbjct: 513 TSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-H 571
Query: 279 KGF-LPDFVTGISTSHVTYN 297
KG + V + +T N
Sbjct: 572 KGVTVSSLVPKLMAKSLTVN 591
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 112/278 (40%), Gaps = 43/278 (15%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TYT+L++ F +G C+KA ++F ++ + G P V YNA++ +Y R A I +
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
G EP+ S+N +V + G +AE + +EM + G+A K++ L+ + V
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 197 EKAFEMKAEMVHKGILPDA-----------------------------------DTYGPL 221
K + EM G+ PD TY L
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 480
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I L +LF E+ + PD T+T + AY + + K + +EMI G
Sbjct: 481 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 540
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM 319
PD T ++ ++ E+ +LR M
Sbjct: 541 APDGGTA--------KVLLSACSSEEQVEQVTSVLRTM 570
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 157/375 (41%), Gaps = 56/375 (14%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D +N L+ A + + +EA + + ES E+TY LI +C G ++A V
Sbjct: 154 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 213
Query: 99 AEMIDTGFSPS---VATYNAIVLAYCRDK-RFREALGIL------RC------------- 135
EM + SP V YNA + + K EA+ + RC
Sbjct: 214 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 273
Query: 136 ----------------LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD 179
+ +PN+ ++ ALV F +G E+AEE+ +++ + GL D
Sbjct: 274 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 333
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQ 239
Y +L+ + G A E+ + M H G PD +Y ++ + S+A +F+
Sbjct: 334 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 393
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
EM R G++P K++ L+SAY +K + EM G PD N++
Sbjct: 394 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD--------TFVLNSM 445
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS- 358
++ L + + +IL M + D +Y+ +I + + L + +L VE+ +K+
Sbjct: 446 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 505
Query: 359 ----ISWLGLWGLYD 369
++W G Y
Sbjct: 506 RPDVVTWTSRIGAYS 520
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 184/460 (40%), Gaps = 56/460 (12%)
Query: 132 ILRC---LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
IL C L + F+P++I FN L+ + K + +EAE L ++ + + TY LI
Sbjct: 139 ILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIK 198
Query: 189 LFCNKGKVEKAFEMKAEMVHKGILPDA---DTYGPLIGSLCLQQ-TLSEAFDLFQEMLRR 244
+C G +E+A + EM + + P Y I L ++ EA D+FQ M R
Sbjct: 199 AYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD 258
Query: 245 GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLC 304
P +TY +++ Y ++ ++ L EM P+ T Y A+++
Sbjct: 259 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT--------YTALVNAFA 310
Query: 305 LLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAY----------KLKVEM 354
E+A EI + E GL PD Y+ ++ + R G Y + E
Sbjct: 311 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA---GYPYGAAEIFSLMQHMGCEP 367
Query: 355 DKKS----ISWLGLWGLYDDIDKSV--MQGLSHEDTFSN---LMSDYLAEGHLEKAYLLE 405
D+ S + G GL+ D + M+ L T + L+S Y + K +
Sbjct: 368 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 427
Query: 406 REINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR-MPTFIIYDTLIENC 464
+E++ P + LN+ + + T+ + L + C + T+ I
Sbjct: 428 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI-------- 479
Query: 465 SNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAY 524
L+ +G G +++ + E N++PD + I + R K
Sbjct: 480 ----------LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCL 529
Query: 525 DMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQN 564
+++ EM+ G AP + L+ A + +++ V++
Sbjct: 530 EVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRT 569
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 8/251 (3%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA------ESDENTYTSLIHLFCDQGQCDKAYK 96
D +N L+ AC + G V+ A +L M + D + +L+ C+ GQ ++A +
Sbjct: 571 DRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKE 630
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
V+ + G + Y V + + + A I + + E+ P+ + F+AL+
Sbjct: 631 VYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID-VA 689
Query: 157 GKGKM-EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
G KM +EA +LQ+ +G+ L +Y+SL+ CN +KA E+ ++ + P
Sbjct: 690 GHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTI 749
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
T LI +LC L +A + E+ GL P+ TY+ LM A + F +F L +
Sbjct: 750 STMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQ 809
Query: 276 MIHKGFLPDFV 286
G P+ +
Sbjct: 810 AKGDGVSPNLI 820
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 177/430 (41%), Gaps = 43/430 (10%)
Query: 26 FAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESD----ENTYTSL 81
F A E +N + YN+L+ RDGR+++ + +L + + D + Y +
Sbjct: 386 FPARNFELHNSNGRSPETSDAYNRLL----RDGRIKDCISLLEDLDQRDLLDMDKIYHAS 441
Query: 82 IHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGF 141
C + + K F ++I +P+++T+N ++ + A G+LR + E G
Sbjct: 442 FFKACKKQRAVKEAFRFTKLI---LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGM 498
Query: 142 EPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFE 201
+ + L+ GK++ E+ +M+ G+ + T+ +LI G+V KAF
Sbjct: 499 TADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFG 558
Query: 202 MKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML--RRGLSPDNKTYTGLMSA 259
+ K + PD + LI + + AFD+ EM + PD+ + LM A
Sbjct: 559 AYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKA 618
Query: 260 YRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM 319
Q +A + +MIHK GI + Y ++ + A I + M
Sbjct: 619 CCNAGQVERAKEVY-QMIHK-------YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDM 670
Query: 320 PEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK-----SISWLGLWG-------- 366
E ++PD V +S +I + L +A+ + + + +IS+ L G
Sbjct: 671 KEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDW 730
Query: 367 -----LYDDIDKSVMQGLSHEDTFSNLMSDYLAEGH-LEKAYLLEREINYFDYLPVDVHY 420
LY+ I KS+ L + N + L EG+ L KA EI P + Y
Sbjct: 731 KKALELYEKI-KSIK--LRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITY 787
Query: 421 SVFLNVLNKK 430
S+ + +K
Sbjct: 788 SMLMLASERK 797
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 167/435 (38%), Gaps = 47/435 (10%)
Query: 55 CRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSV 110
C+ R +A IL + + D Y + F G + V + G +P
Sbjct: 234 CKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRS 293
Query: 111 ATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQE 170
+ Y A +L KR EA + ++ F + +AL+ G + A E L
Sbjct: 294 SDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALI-GSVSAVDPDSAVEFLVY 352
Query: 171 MNQKGLALDDKTYTSLIHLFCNKGKVE---KAFEMKAEMVHKGILPDADTYGPLIGSLCL 227
M G +T + L C K + KA+E+ + KG + +Y +I LC
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYEL---LSSKGYFSELQSYSLMISFLCK 409
Query: 228 QQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
+ E++ QEM + GL+PD Y L+ A A L DEM FV
Sbjct: 410 AGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM--------FVE 461
Query: 288 GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC---RIREL 344
G + TYN +I L AEE+L + M E G+ PD Y ++I G C +I
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAA 521
Query: 345 GKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLL 404
+ ++ +E D K+++ S + + + GH +A L
Sbjct: 522 MEVFRKCMERDHKTVT---------------------RRVLSEFVLNLCSNGHSGEASQL 560
Query: 405 EREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENC 464
RE + ++ V V L + + H+ W I V + I D L C
Sbjct: 561 LREREHLEHTGAHV---VLLKCVADAKEVEIGIRHMQW-IKEVSPSLVHTISSDLLASFC 616
Query: 465 SNNEFKSVVGLVKGF 479
S+++ S++ ++
Sbjct: 617 SSSDPDSILPFIRAI 631
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
+Y+ ++ C+ GRV E+ L+ M + D + Y +LI C A K++ EM
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G ++ TYN ++ + E+L + ++ERG EP+ + +L++G C + K+
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
Query: 162 EEAEELLQE-MNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH 208
E A E+ ++ M + + + + + C+ G +A ++ E H
Sbjct: 519 EAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLREREH 566
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 29 AWTETEKTNWKGLA-DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIH 83
++T ++ +GLA D + YN L+ ACC+ + A + M + + TY LI
Sbjct: 416 SYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIR 475
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
++G+ +++ ++F +M++ G P Y +++ C++ + A+ + R +ER +
Sbjct: 476 KLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKT 535
Query: 144 -NLISFNALVQGFCGKGKMEEAEELLQE 170
+ V C G EA +LL+E
Sbjct: 536 VTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 168/464 (36%), Gaps = 80/464 (17%)
Query: 140 GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKA 199
G+ + IS++++ + + + L +++ + LD Y SLI K + A
Sbjct: 77 GYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSA 136
Query: 200 FEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
F + E G D L+ L A LF +M +G+S + + +
Sbjct: 137 FWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGW 196
Query: 260 YRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM 319
+ ++ ++ L DE + K L I+ S + I+H LC R +A IL +
Sbjct: 197 FCRSSETNQLLRLVDE-VKKANL-----NINGSIIAL-LILHSLCKCSREMDAFYILEEL 249
Query: 320 PEIGLSPDAVSYSTVIFGFC-------------RIRELG----------------KAYKL 350
I PD ++Y + F + R+LG A +L
Sbjct: 250 RNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRL 309
Query: 351 KVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED---------------------TFSNLM 389
+ + G + + +DI +++ +S D T S L
Sbjct: 310 TEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLS 369
Query: 390 SD---YLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISH 446
+ + HL KAY L YF L YS+ ++ L K R+ E+ L
Sbjct: 370 KNLCRHDKSDHLIKAYELLSSKGYFSELQ---SYSLMISFLCKAGRVRESYTALQEMKKE 426
Query: 447 VCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAV 506
P +Y+ LIE C E +++ A + D M K +
Sbjct: 427 GL--APDVSLYNALIEACCKAE---------------MIRPAKKLWDEMFVEGCKMNLTT 469
Query: 507 YNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEALC 550
YN+LI G ++ ++ +M+ G P ++LIE LC
Sbjct: 470 YNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLC 513
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 100/483 (20%), Positives = 175/483 (36%), Gaps = 63/483 (13%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D + Y SLI + A+ V E TG N ++ D + A +
Sbjct: 116 DSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLF 175
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI-HLFCN 192
+ +G N + F + FC + + L+ E+ + L ++ LI H C
Sbjct: 176 VKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCK 235
Query: 193 KGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKT 252
+ AF + E+ + PD Y + + + L E + ++ + G++P +
Sbjct: 236 CSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSD 295
Query: 253 YTG----LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDR 308
Y L+SA RL A E+I G P + +A+I + +D
Sbjct: 296 YRAFILDLISAKRLTEAKEVA-----EVIVSGKFP-------MDNDILDALIGSVSAVD- 342
Query: 309 AEEALEILRGMPEIGLSPDAVSYSTVIFGFCR---IRELGKAYKLKVEMDKKSISWLGLW 365
+ A+E L M G P + S + CR L KAY+L L
Sbjct: 343 PDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYEL-----------LSSK 391
Query: 366 GLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLN 425
G + ++ ++S ++S G + ++Y +E+ P Y+ +
Sbjct: 392 GYFSEL-----------QSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIE 440
Query: 426 VLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLM 485
K I AK LW + +E C N + L++ G
Sbjct: 441 ACCKAEMIRPAKK--LW--------------DEMFVEGCKMN-LTTYNVLIRKLSEEGEA 483
Query: 486 KKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMY---MEMVHYGFAPHMFSV 542
+++ R D+MLE +PD +Y LI C+ + A +++ ME H + S
Sbjct: 484 EESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSE 543
Query: 543 LAL 545
L
Sbjct: 544 FVL 546
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 1/208 (0%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEM-IDTGFSPSVATYNAIVLAYCRDKRFREALGILRC 135
+ T ++ + C G+ +A ++ EM + G ++ T+ +++ + F E +L+
Sbjct: 212 SLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKL 271
Query: 136 LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
+ + +L S+ L+ GF GK+EEAE L+ M+ K L ++ Y +++ + G
Sbjct: 272 MEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGL 331
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
VEK E+ +EM +G+ P+ DTY L+ LC + EA E+ D + Y+
Sbjct: 332 VEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYST 391
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
L K+ + EMI GF+P
Sbjct: 392 LSEECYRVGMIDKSLEVVAEMIRDGFIP 419
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 6/223 (2%)
Query: 39 KGL-ADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDK 93
KG+ A+ T+ ++ C + EE +L+ M + D ++Y LI F G+ ++
Sbjct: 240 KGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEE 299
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A ++ M D YN I+ Y R + + + + RG PN ++ L+
Sbjct: 300 AERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMN 359
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
G C GK+ EA L E+ +D++ Y++L G ++K+ E+ AEM+ G +P
Sbjct: 360 GLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIP 419
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
A L SL + EA L +++ G+ P + + GL
Sbjct: 420 GATICERLADSL-FEVNRKEAQMLITIVVKCGIKPKSCSQYGL 461
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 114/279 (40%), Gaps = 10/279 (3%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
+ S+I ++ D G+ + +VF M + T +L R + A ++
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 138 ERGFEP-NLISFNALVQGFCGKGKMEEAEELLQEMN-QKGLALDDKTYTSLIHLFCNKGK 195
E G + + S +V C G++ A EL++EM KG+ + T+ S+I +
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
E+ + M + ++ D D+Y LI + EA L M + L ++ Y
Sbjct: 262 FEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNL 321
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
+M+ Y K L EM +G P+ TY +++GLC + EA+
Sbjct: 322 IMNGYSRFGLVEKVIELYSEMSSRGVTPN--------KDTYWVLMNGLCKAGKVCEAMSF 373
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
L + D YST+ R+ + K+ ++ EM
Sbjct: 374 LNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEM 412
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 156/357 (43%), Gaps = 15/357 (4%)
Query: 34 EKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTS----LIHLFCDQG 89
++ + +G T++ LV C+ G+++EA LR + +D S L+ C +
Sbjct: 241 DQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKR 300
Query: 90 QCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE-RGFEPNLISF 148
+ +A K+ E+ G YN + A + L+ + G E + +
Sbjct: 301 KFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRY 360
Query: 149 NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH 208
N++V + ++ ++L EM +G++ + KT + + FC G V++A E+
Sbjct: 361 NSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSE 420
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSK 268
G P A +Y LI +LC +++ +A+D+ + + RG KT++ L +A + +
Sbjct: 421 IGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDM 480
Query: 269 AFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDA 328
A L + LP + G II LC + + E+AL I + G+
Sbjct: 481 ARELVIAAAERDLLPKRIAGCK--------IISALCDVGKVEDALMINELFNKSGVDTSF 532
Query: 329 VSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTF 385
++++I+G + A KL + M +K + LY ++ + V + S E F
Sbjct: 533 KMFTSLIYGSITLMRGDIAAKLIIRMQEK--GYTPTRSLYRNVIQCVCEMESGEKNF 587
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 138/354 (38%), Gaps = 49/354 (13%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
++ T N + C+ G V+EAL + R +E +Y LIH C ++AY V
Sbjct: 391 NKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVL 450
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
ID G T++ + A C + A ++ ER P I+ ++ C
Sbjct: 451 KGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDV 510
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
GK+E+A + + N+ G+ K +TSLI+ + + A ++ M KG P Y
Sbjct: 511 GKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLY 570
Query: 219 GPLIGSLC---------------LQQTLSE----AFDLFQE-----------------ML 242
+I +C Q +L E A++LF E M
Sbjct: 571 RNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMD 630
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
R G++P + ++ +Y + + A H ++ +G T Y +I G
Sbjct: 631 RDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG---------KTKKRLYQVMIVG 681
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDK 356
LC ++ ++A+ L M GL P Y I C + +A L E K
Sbjct: 682 LCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRK 735
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 169/432 (39%), Gaps = 52/432 (12%)
Query: 89 GQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISF 148
G+ D A + F M G Y+ ++ A +K F I + RGF ++
Sbjct: 196 GRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGF-VCAVTH 254
Query: 149 NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH 208
+ LV+ FC +GK++EAE+ L+ + A L+ C+K K ++A ++ E+
Sbjct: 255 SILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKL 314
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR-RGLSPDNKTYTGLMSAYRLQAQFS 267
G + Y I +L L+ D Q++ G + Y ++ +
Sbjct: 315 VGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLD 374
Query: 268 KAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPD 327
+ + EM+ V G+S + T NA + C +EALE+ R EIG +P
Sbjct: 375 GVYDILTEMM--------VRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPT 426
Query: 328 AVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSN 387
A+SY+ +I C + +AY + L ID+ G TFS
Sbjct: 427 AMSYNYLIHTLCANESVEQAYDV----------------LKGAIDRGHFLG---GKTFST 467
Query: 388 LMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHV 447
L + +G + A L D LP + ++ L ++ +A
Sbjct: 468 LTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDA----------- 516
Query: 448 CLRMPTFIIYDTLIENCSNNEFKSVVGLVKG--FGMRGLMKKAARAHDRMLEGNYKPDGA 505
+I + ++ + FK L+ G MRG + AA+ RM E Y P +
Sbjct: 517 ------LMINELFNKSGVDTSFKMFTSLIYGSITLMRGDI--AAKLIIRMQEKGYTPTRS 568
Query: 506 VYNLLIFDHCRC 517
+Y +I C C
Sbjct: 569 LYRNVI--QCVC 578
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 17/203 (8%)
Query: 67 LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRF 126
LR ++ + Y +I C + D A EM G PS+ Y + C ++++
Sbjct: 664 LREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKY 723
Query: 127 REALGILRCLIERG-----FEPNLISFNALVQG--FCGKGKMEEAEELLQEMNQKGLALD 179
EA+G++ + G F N++ NA+ + +M E+ + EM
Sbjct: 724 DEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEM-------- 775
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQ 239
K+ LI LF + +E + E++ K D TY L+ + + Q +A+++ +
Sbjct: 776 -KSLGELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIVMNQA-EDAYEMVE 833
Query: 240 EMLRRGLSPDNKTYTGLMSAYRL 262
+ RRG P+ +T L A R+
Sbjct: 834 RIARRGYVPNERTDMILERANRI 856
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 12/240 (5%)
Query: 49 KLVLACCRDGRVEEALGILRGMAESDENT----YTSLIHLFCDQGQCDKAYKVFAEMIDT 104
K++ A C G+VE+AL I +S +T +TSLI+ + D A K+ M +
Sbjct: 502 KIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEK 561
Query: 105 GFSPSVATYNAIVLAYCR----DKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
G++P+ + Y ++ C +K F L + + +E + ++N ++G GK
Sbjct: 562 GYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSL---WEHKVQAYNLFIEGAGFAGK 618
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+ A + M++ G+ + ++ + K+ A ++ +G Y
Sbjct: 619 PKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQV 677
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
+I LC L +A +EM GL P + Y + + ++ +A L +E G
Sbjct: 678 MIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSG 737
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 5/247 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGIL-RGMAES---DENTYTSLIHLFCDQGQCDKAYKVF 98
D T ++ A R G V+ AL + R E D T+++LI ++ G D ++
Sbjct: 244 DNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIY 303
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM G P++ YN ++ + R KR +A I + LI GF PN ++ ALV+ +
Sbjct: 304 EEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRA 363
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH-KGILPDADT 217
++A + +EM +KGL+L Y +L+ + + V++AFE+ +M + + PD+ T
Sbjct: 364 RYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWT 423
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
+ LI +SEA +M G P T ++ Y Q D+++
Sbjct: 424 FSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVL 483
Query: 278 HKGFLPD 284
G PD
Sbjct: 484 ELGITPD 490
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 11/260 (4%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
Y + +F +K+ K+F EM++ G P AT+ I+ ++ + A+ +
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
G EP+ ++ A++ + G ++ A L + +D T+++LI ++ G +
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
+ EM G+ P+ Y LI S+ + +A ++++++ G +P+ TY L+
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDR-AEEALEIL 316
AY A + EM K G+S + + YN ++ +C +R +EA EI
Sbjct: 358 RAYGRARYGDDALAIYREMKEK--------GLSLTVILYNTLL-SMCADNRYVDEAFEIF 408
Query: 317 RGMPEI-GLSPDAVSYSTVI 335
+ M PD+ ++S++I
Sbjct: 409 QDMKNCETCDPDSWTFSSLI 428
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 126/291 (43%), Gaps = 13/291 (4%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
+S ++ Y+SLI L C ++I TGF + +A+V L
Sbjct: 103 KSYDSRYSSLIKLAESLDACKPNEADVCDVI-TGFGGKLFEQDAVVTLNNMTNPETAPL- 160
Query: 132 ILRCLIERGFEPN--LISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHL 189
+L L+E +P+ +I +N ++ F +E++E+L EM ++G+ D+ T+T++I
Sbjct: 161 VLNNLLET-MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISC 219
Query: 190 FCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPD 249
G ++A E +M G PD T +I + + A L+ D
Sbjct: 220 ARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRID 279
Query: 250 NKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRA 309
T++ L+ Y + + ++ +EM G P+ V YN +I + R
Sbjct: 280 AVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNL--------VIYNRLIDSMGRAKRP 331
Query: 310 EEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
+A I + + G +P+ +Y+ ++ + R R A + EM +K +S
Sbjct: 332 WQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLS 382
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 122/295 (41%), Gaps = 26/295 (8%)
Query: 107 SPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEE 166
S V YN + + + K ++ + ++ERG +P+ +F ++ G + A E
Sbjct: 172 SREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVE 231
Query: 167 LLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLC 226
++M+ G D+ T ++I + G V+ A + + DA T+ LI
Sbjct: 232 WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYG 291
Query: 227 LQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFV 286
+ ++++EM G+ P+ Y L+ + + +A + ++I GF P++
Sbjct: 292 VSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWS 351
Query: 287 TGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGK 346
T Y A++ ++AL I R M E GLS + Y+T++ R + +
Sbjct: 352 T--------YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDE 403
Query: 347 AYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA 401
A+++ +M W TFS+L++ Y G + +A
Sbjct: 404 AFEIFQDMKNCETCDPDSW------------------TFSSLITVYACSGRVSEA 440
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 20 DVMIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENT-- 77
D++ GF W+ TY LV A R ++AL I R M E +
Sbjct: 340 DLITNGFTPNWS--------------TYAALVRAYGRARYGDDALAIYREMKEKGLSLTV 385
Query: 78 --YTSLIHLFCDQGQCDKAYKVFAEMID-TGFSPSVATYNAIVLAYCRDKRFREALGILR 134
Y +L+ + D D+A+++F +M + P T+++++ Y R EA L
Sbjct: 386 ILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALL 445
Query: 135 CLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK---GLALDDK 181
+ E GFEP L +++Q + GK ++ +++++ +Q G+ DD+
Sbjct: 446 QMREAGFEPTLFVLTSVIQCY---GKAKQVDDVVRTFDQVLELGITPDDR 492
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 4/249 (1%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
YN+++ + ++E A + ES D TY +L+ LF ++G KA++++ M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
T +TY I+ + + R A + + + ER P+ F++LV G++
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+ + ++ EM G + SLI + GK++ A + EM G P+ Y +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
I S L A +F++M + G P TY+ L+ + Q A + + M + G
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 282 LPDFVTGIS 290
P + IS
Sbjct: 485 RPGLSSYIS 493
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 6/220 (2%)
Query: 34 EKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQG 89
EKT+ L D +TY ++ + + GR++ A + + M E + ++SL+ G
Sbjct: 305 EKTD--SLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAG 362
Query: 90 QCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFN 149
+ D + KV+ EM G PS + +++ +Y + + AL + + + GF PN +
Sbjct: 363 RLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYT 422
Query: 150 ALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK 209
+++ GK+E A + ++M + G TY+ L+ + G+V+ A ++ M +
Sbjct: 423 MIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA 482
Query: 210 GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPD 249
G+ P +Y L+ L ++ + A + EM G S D
Sbjct: 483 GLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 11/242 (4%)
Query: 97 VFAEMIDTGFSP---SVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
+F EM+ S S YN ++ + ++ A + E G + + ++N L+
Sbjct: 227 LFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMM 286
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
F KG +A E+ + M + LD TY +I G+++ AF++ +M + + P
Sbjct: 287 LFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRP 346
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
+ L+ S+ L + ++ EM G P + L+ +Y + A L
Sbjct: 347 SFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLW 406
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
DEM GF P+F G+ Y II + E A+ + + M + G P +YS
Sbjct: 407 DEMKKSGFRPNF--GL------YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSC 458
Query: 334 VI 335
++
Sbjct: 459 LL 460
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 118/279 (42%), Gaps = 8/279 (2%)
Query: 76 NTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRC 135
N Y +I + + A+ F + ++G TYN +++ + +A I
Sbjct: 244 NAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 136 LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
+ + + ++ ++ G+++ A +L Q+M ++ L ++SL+ G+
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
++ + ++ EM G P A + LI S L A L+ EM + G P+ YT
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
++ ++ + A + +M GFLP + TY+ ++ + + A++I
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLP--------TPSTYSCLLEMHAGSGQVDSAMKI 475
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
M GL P SY +++ R + A K+ +EM
Sbjct: 476 YNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 151/315 (47%), Gaps = 37/315 (11%)
Query: 56 RDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNA 115
R G++ EA + ++ S++ + G +A ++F EM + +V ++N
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWNG 84
Query: 116 IVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKG 175
+V Y +++ EA + + ER N++S+ A+V+G+ +G + EAE L M ++
Sbjct: 85 LVSGYIKNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLFWRMPER- 139
Query: 176 LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAF 235
++ ++T + + G+++KA ++ M K ++ + +IG LC + + EA
Sbjct: 140 ---NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTN----MIGGLCREGRVDEAR 192
Query: 236 DLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVT 295
+F EM R + T+T +++ YR + A L + M K + V+
Sbjct: 193 LIFDEMRERNVV----TWTTMITGYRQNNRVDVARKLFEVMPEK------------TEVS 236
Query: 296 YNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM- 354
+ +++ G L R E+A E MP + P ++ + +I GF + E+ KA ++ M
Sbjct: 237 WTSMLLGYTLSGRIEDAEEFFEVMP---MKP-VIACNAMIVGFGEVGEISKARRVFDLME 292
Query: 355 DKKSISWLGLWGLYD 369
D+ + +W G+ Y+
Sbjct: 293 DRDNATWRGMIKAYE 307
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 126/295 (42%), Gaps = 24/295 (8%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
+ D ++ CR+GRV+EA I M E + T+T++I + + D A K+F
Sbjct: 169 VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M + + ++ +++L Y R +A + +P +I+ NA++ GF G+
Sbjct: 229 MPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM---PMKP-VIACNAMIVGFGEVGE 280
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+ +A + M + D+ T+ +I + KG +A ++ A+M +G+ P +
Sbjct: 281 ISKARRVFDLMEDR----DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
++ +L + ++R D + LM+ Y + KA + D K
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
+ +N+II G EEAL+I MP G P+ V+ ++
Sbjct: 397 I------------IMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAIL 439
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 12/189 (6%)
Query: 74 DENTYTS--LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
D++ Y + L+ ++ G+ KA VF D S + +N+I+ Y EAL
Sbjct: 363 DDDVYVASVLMTMYVKCGELVKAKLVF----DRFSSKDIIMWNSIISGYASHGLGEEALK 418
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDD-KTYTSLIHLF 190
I + G PN ++ A++ GK+EE E+ + M K + Y+ + +
Sbjct: 419 IFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML 478
Query: 191 CNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDN 250
G+V+KA E+ M I PDA +G L+G+ L A +++ PDN
Sbjct: 479 GRAGQVDKAMELIESMT---IKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN--EPDN 533
Query: 251 KTYTGLMSA 259
L+S+
Sbjct: 534 AGTYVLLSS 542
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 133/289 (46%), Gaps = 13/289 (4%)
Query: 34 EKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQG 89
E+ ++ ++ E +++ + G E A + M D ++ +L+ +
Sbjct: 99 EQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSK 158
Query: 90 QCDKAYKVFAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISF 148
+ D ++F E+ P + +YN ++ A C EA+ +L + +G +P++++F
Sbjct: 159 KFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTF 218
Query: 149 NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH 208
N L+ KG+ E EE+ +M +K +A+D +TY + + N+ K ++ + E+
Sbjct: 219 NTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKA 278
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSK 268
G+ PD ++ +I + + EA ++E+++ G PD T+ L+ A F
Sbjct: 279 SGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFES 338
Query: 269 AFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
A L E K +L G +T + ++ G + EEA EI++
Sbjct: 339 AIELFKETFSKRYL----VGQTTLQQLVDELVKG----SKREEAEEIVK 379
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 155/400 (38%), Gaps = 74/400 (18%)
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ SP + ++V KR E C ER F N+ ++ V+ ++
Sbjct: 33 VTAAISPPQKSLTSLVNGERNPKRIVEKFKKA-CESER-FRTNIAVYDRTVRRLVAAKRL 90
Query: 162 EEAEELLQE------MNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
EE+L+E M+++G A +I L+ G E A ++ EM P+
Sbjct: 91 HYVEEILEEQKKYRDMSKEGFA------ARIISLYGKAGMFENAQKVFEEM------PNR 138
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
D C + LS + L+SAYRL SK F + +E
Sbjct: 139 D---------CKRSVLS--------------------FNALLSAYRL----SKKFDVVEE 165
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
+ ++ LP ++ I V+YN +I LC D EA+ +L + GL PD V+++T++
Sbjct: 166 LFNE--LPGKLS-IKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLL 222
Query: 336 FGFCRIRELGKAYKLKVEMDKKSISW------LGLWGLYDDIDKSVMQGLSHEDTFSNLM 389
+ ++ +M +K+++ L GL ++ + L E S L
Sbjct: 223 LSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLK 282
Query: 390 SDYLA----------EGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHH 439
D + EG +++A +EI Y P +++ L + K A
Sbjct: 283 PDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIEL 342
Query: 440 LLWFISHVCLRMPTFI--IYDTLIENCSNNEFKSVVGLVK 477
S L T + + D L++ E + +V + K
Sbjct: 343 FKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAK 382
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 147/322 (45%), Gaps = 20/322 (6%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQGQCDKAYKV 97
A ++T KL+ C E I LR ES+ + SLI ++ G+ + + KV
Sbjct: 87 AYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKV 146
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
F M D S ++N+I+ +Y + +A+G+L + G +P+++++N+L+ G+
Sbjct: 147 FNSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYAS 202
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
KG ++A +L+ M GL + +SL+ G ++ + ++ + D
Sbjct: 203 KGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYV 262
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
LI L A +F M + + N +GL A L+ A L M
Sbjct: 263 ETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK----DAEALMIRME 318
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
+G PD +T+N++ G L + E+AL+++ M E G++P+ VS++ + G
Sbjct: 319 KEGIKPD--------AITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSG 370
Query: 338 FCRIRELGKAYKLKVEMDKKSI 359
+ A K+ ++M ++ +
Sbjct: 371 CSKNGNFRNALKVFIKMQEEGV 392
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 16/270 (5%)
Query: 66 ILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKR 125
ILR D T+LI ++ G A VF +M+D + ++ +N++V
Sbjct: 251 ILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF-DMMD---AKNIVAWNSLVSGLSYACL 306
Query: 126 FREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTS 185
++A ++ + + G +P+ I++N+L G+ GK E+A +++ +M +KG+A + ++T+
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 186 LIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
+ G A ++ +M +G+ P+A T L+ L L ++ LR+
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCL 305
L D T L+ Y A + F + S ++N ++ G +
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEI------------FWGIKNKSLASWNCMLMGYAM 474
Query: 306 LDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
R EE + M E G+ PDA+++++V+
Sbjct: 475 FGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 143/320 (44%), Gaps = 39/320 (12%)
Query: 70 MAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIV--LAYCRDKR-F 126
M + D+ + ++ + G +KA ++F EM FS + A + +V L C +K F
Sbjct: 49 MPKRDDLAWNEIVMVNLRSGNWEKAVELFREM---QFSGAKAYDSTMVKLLQVCSNKEGF 105
Query: 127 REALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSL 186
E I ++ G E N+ N+L+ + GK+E + ++ M + L+ ++ S+
Sbjct: 106 AEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSI 161
Query: 187 IHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL 246
+ + G V+ A + EM G+ PD T+ L+ + +A + + M GL
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGL 221
Query: 247 SPDNKTYTGLMSAYRLQA--QFSKAFH-----------------LQDEMIHKGFLP---- 283
P + + L+ A + KA H L D I G+LP
Sbjct: 222 KPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARM 281
Query: 284 DFVTGISTSHVTYNAIIHGL---CLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
F + + V +N+++ GL CLL AE ++ M + G+ PDA++++++ G+
Sbjct: 282 VFDMMDAKNIVAWNSLVSGLSYACLLKDAE---ALMIRMEKEGIKPDAITWNSLASGYAT 338
Query: 341 IRELGKAYKLKVEMDKKSIS 360
+ + KA + +M +K ++
Sbjct: 339 LGKPEKALDVIGKMKEKGVA 358
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 135/314 (42%), Gaps = 34/314 (10%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
+ D T+ SL + G+ +KA V +M + G +P+V ++ AI ++ FR AL
Sbjct: 323 KPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALK 382
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+ + E G PN + + L++ + +E+ +K L D T+L+ ++
Sbjct: 383 VFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYG 442
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
G ++ A E+ + +K + ++ ++ + E F ML G+ PD
Sbjct: 443 KSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAI 498
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHK-GFLPDFVTGISTSHVTYNAIIHGLCLLD--- 307
T+T ++S + + + D M + G +P I H C++D
Sbjct: 499 TFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIP--------------TIEHCSCMVDLLG 544
Query: 308 ---RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI-RELGKA----YKLKVEMDKKSI 359
+EA + ++ M L PDA + + C+I R+L A +L+V S
Sbjct: 545 RSGYLDEAWDFIQTMS---LKPDATIWGAFL-SSCKIHRDLELAEIAWKRLQVLEPHNSA 600
Query: 360 SWLGLWGLYDDIDK 373
+++ + LY ++++
Sbjct: 601 NYMMMINLYSNLNR 614
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 165/426 (38%), Gaps = 56/426 (13%)
Query: 129 ALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
+LG L + + + +++N +V G E+A EL +EM G D T L+
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 189 LFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
+ NK + ++ ++ G+ + LI L + +F M R LS
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS- 156
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDR 308
++ ++S+Y A L DEM G PD VT+N+++ G
Sbjct: 157 ---SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDI--------VTWNSLLSGYASKGL 205
Query: 309 AEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR--ELGKAYKLKVEMDKKSISWLGLWG 366
+++A+ +L+ M GL P S S+++ +LGKA + ++ LW
Sbjct: 206 SKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ-------LW- 257
Query: 367 LYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNV 426
YD ++ L+ Y+ G+L A ++ FD +
Sbjct: 258 -YDVYVETT------------LIDMYIKTGYLPYARMV------FDMM------------ 286
Query: 427 LNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMK 486
A+ A + L+ +S+ CL + + + + + L G+ G +
Sbjct: 287 ---DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPE 343
Query: 487 KAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALI 546
KA +M E P+ + + + GN A ++++M G P+ ++ L+
Sbjct: 344 KALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Query: 547 EALCCV 552
+ L C+
Sbjct: 404 KILGCL 409
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREAL------ 130
TYT+LI G CD A ++F EM+ G P + TYN ++ C++ + +AL
Sbjct: 18 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVE 77
Query: 131 ---GILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
+ L +G +PN++++ ++ GFC KG EEA L ++M + G D TY +LI
Sbjct: 78 DGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
Query: 188 HLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
G + E+ EM DA TYG
Sbjct: 138 RAHLRDGDKAASAELIKEMRSCRFAGDASTYG 169
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+ R + +RG N +++ L+QG G + A+E+ +EM G+ D TY L+ C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 192 NKGKVEKA---------FEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
GK+EKA +++ + KG+ P+ TY +I C + EA+ LF++M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
G PD+ TY L+ A+ + + L EM F D T
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 167
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 10/184 (5%)
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
++F EM G + TY ++ + A I + ++ G P+++++N L+ G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 156 CGKGKMEEA---------EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEM 206
C GK+E+A +L ++ KG+ + TYT++I FC KG E+A+ + +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 207 VHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF 266
G LPD+ TY LI + + + +L +EM + D TY GL++ +
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRL 180
Query: 267 SKAF 270
K F
Sbjct: 181 DKGF 184
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
E+ EM +G++ + TY LI L A ++F+EM+ G+ PD TY L+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 261 RLQAQFSKAFHLQDEMIHKG---FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
+ KA L + G F + G+ + VTY +I G C EEA + R
Sbjct: 62 CKNGKLEKA--LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQ 377
M E G PD+ +Y+T+I R + + +L EM +S + G Y
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM--RSCRFAGDASTY--------- 168
Query: 378 GLSHEDTFSNLMSDYLAEGHLEKAYL 403
L++D L +G L+K +L
Sbjct: 169 ---------GLVTDMLHDGRLDKGFL 185
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 47/194 (24%)
Query: 7 LFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGI 66
+FK + + VPP D+M TYN L+ C++G++E+AL
Sbjct: 38 IFKEMVSDGVPP-DIM-----------------------TYNILLDGLCKNGKLEKAL-- 71
Query: 67 LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRF 126
G+ + + +F + G P+V TY ++ +C+
Sbjct: 72 --------------------VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFK 111
Query: 127 REALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSL 186
EA + R + E G P+ ++N L++ G + EL++EM A D TY L
Sbjct: 112 EEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GL 170
Query: 187 IHLFCNKGKVEKAF 200
+ + G+++K F
Sbjct: 171 VTDMLHDGRLDKGF 184
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 163/377 (43%), Gaps = 40/377 (10%)
Query: 8 FKTFLRNRVPPPDV-----MIRGFAA------AWTETEKTNWKG-LADETTYNKLVLACC 55
+K F+ N P + +++G + A E KG + D Y+ L++ C
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 56 RDGRVEEALGILRGMAES------DENTYTSLIHLFCDQGQCDKAYKVFAEMI--DTGFS 107
++ + L + + + E D Y L+ + + +A + + E + ++
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVR 307
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP-----NLISFNALVQGFCGKGKME 162
S YN ++ A + +F EAL + + + P NL +FN +V G+C GK E
Sbjct: 308 MSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFE 367
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
EA E+ ++M + D ++ +L++ C+ + +A ++ EM K + PD TYG L+
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
+ + + E ++ M+ L P+ Y RLQ Q KA L D K F
Sbjct: 428 DTCFKEGKIDEGAAYYKTMVESNLRPNLAVYN------RLQDQLIKAGKLDD---AKSFF 478
Query: 283 PDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR-- 340
V+ + Y I+ L R +E L+I+ M L D V S + F +
Sbjct: 479 DMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEM----LDDDTVRVSEELQEFVKEE 534
Query: 341 IRELGKAYKLKVEMDKK 357
+R+ G+ L+ M++K
Sbjct: 535 LRKGGREGDLEKLMEEK 551
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 8/261 (3%)
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG-FEPNLISFNALVQGFCGKGKME 162
G +P++ TYN I AY ++ AL + I+ P++ +F LV+G +E
Sbjct: 159 AGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLE 218
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK--GILPDADTYGP 220
+A E+ ++M KG +D Y+ L+ + ++ E+ K G + D YG
Sbjct: 219 KAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQ 278
Query: 221 LIGSLCLQQTLSEAFDLFQEML--RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIH 278
L+ +++ EA + ++E + + Y ++ A +F +A L D +
Sbjct: 279 LMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKK 338
Query: 279 KGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
+ P ++ + T+N +++G C + EEA+E+ R M + SPD +S++ ++
Sbjct: 339 EHNPP---RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQL 395
Query: 339 CRIRELGKAYKLKVEMDKKSI 359
C L +A KL EM++K++
Sbjct: 396 CDNELLAEAEKLYGEMEEKNV 416
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 191/490 (38%), Gaps = 82/490 (16%)
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEEL 167
P++ T N ++ A R ++ L + + + G PN+I++N + Q + K E A E
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 168 LQE-MNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLC 226
+ ++ L T+ L+ + +EKA E+K +M KG + D Y L+
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 227 LQQTLSEAFDLFQEMLRR--GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
L+QE+ + G D Y LM Y ++ +A +E + +
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGEN---- 303
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL 344
+ + S + YN ++ L + +EAL++ DAV +E
Sbjct: 304 --SKVRMSAMAYNYVLEALSENGKFDEALKLF----------DAVK-----------KEH 340
Query: 345 GKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLL 404
L V + TF+ +++ Y A G E+A +
Sbjct: 341 NPPRHLAVNLG----------------------------TFNVMVNGYCAGGKFEEAMEV 372
Query: 405 EREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENC 464
R++ F P + ++ +N L + EA+ L + ++ P Y L++ C
Sbjct: 373 FRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEK-LYGEMEEKNVK-PDEYTYGLLMDTC 430
Query: 465 SNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKA- 523
FK G + + A + M+E N +P+ AVYN L + G + A
Sbjct: 431 ----FKE-----------GKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAK 475
Query: 524 --YDMYMEMVHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQVLN 581
+DM + + + F + AL EA R ++M ++ L + SE LQ
Sbjct: 476 SFFDMMVSKLKMDDEAYKFIMRALSEA----GRLDEMLKIVDEMLDDDTVRVSEELQEFV 531
Query: 582 EIDVREGQTE 591
+ ++R+G E
Sbjct: 532 KEELRKGGRE 541
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 111/535 (20%), Positives = 223/535 (41%), Gaps = 99/535 (18%)
Query: 28 AAWTETEKTNWK-----GLADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLI 82
A T+ +K+ K G +D +N + + R GR EAL + + M +Y +I
Sbjct: 43 ATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMI 102
Query: 83 HLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFE 142
+ G+ + A K+F EM + + ++N ++ Y R++ LG R L E E
Sbjct: 103 SGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRN----LGKARELFEIMPE 154
Query: 143 PNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEM 202
++ S+N ++ G+ G +++A + M +K +D ++ +L+ + K+E+A +
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACML 210
Query: 203 KAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRL 262
+ ++ ++ L+G ++ + EA F M R D ++ +++ Y
Sbjct: 211 FKSRENWALV----SWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQ 262
Query: 263 QAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEI 322
+ +A L DE + T+ A++ G EEA E+ MPE
Sbjct: 263 SGKIDEARQLFDESPVQDVF------------TWTAMVSGYIQNRMVEEARELFDKMPE- 309
Query: 323 GLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHE 382
+ VS++ ++ G+ + + A +L M +++S
Sbjct: 310 ---RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS---------------------- 344
Query: 383 DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPV--DVHYSVFLNVLNKKARITEAKHHL 440
T++ +++ Y G + +A N FD +P V ++ + A +++ H
Sbjct: 345 -TWNTMITGYAQCGKISEAK------NLFDKMPKRDPVSWAAMI------AGYSQSGH-- 389
Query: 441 LWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNY 500
S LR+ F+ + + + F S + L K+ H R+++G Y
Sbjct: 390 ----SFEALRL--FVQMEREGGRLNRSSFSSALSTCADVVALELGKQ---LHGRLVKGGY 440
Query: 501 KPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVH----------YGFAPHMFSVLAL 545
+ V N L+ +C+CG++ +A D++ EM G++ H F +AL
Sbjct: 441 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 141/329 (42%), Gaps = 44/329 (13%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
+ D T+ +V ++ VEEA + M E +E ++ +++ + + + A ++F
Sbjct: 278 VQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF-- 335
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
D +V+T+N ++ Y + + EA + + +R +P +S+ A++ G+ G
Sbjct: 336 --DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR--DP--VSWAAMIAGYSQSGH 389
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
EA L +M ++G L+ +++S + + +E ++ +V G
Sbjct: 390 SFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNA 449
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKG 280
L+ C ++ EA DLF+EM D ++ +++ Y A + M +G
Sbjct: 450 LLLMYCKCGSIEEANDLFKEM----AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG 505
Query: 281 FLPDFVTGIST-SHVTYNAII---------------------HGLCLLD---RA---EEA 312
PD T ++ S ++ ++ H C++D RA E+A
Sbjct: 506 LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDA 565
Query: 313 LEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
+++ MP PDA + T++ G R+
Sbjct: 566 HNLMKNMP---FEPDAAIWGTLL-GASRV 590
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 10/266 (3%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
TYT L + + Q D+A +F M+ G P++ Y +++ Y + + +A L +
Sbjct: 146 TYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYM 205
Query: 137 IE-RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
+P++ +F L+ C G+ + + ++ EM+ G+ TY ++I + G
Sbjct: 206 KSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGM 265
Query: 196 VEKAFEMKAEMVHKG-ILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYT 254
E+ + A+M+ G LPD T +IGS + + + + G+ PD T+
Sbjct: 266 FEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFN 325
Query: 255 GLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALE 314
L+ ++ + K + D M + F S + VTYN +I R E+ +
Sbjct: 326 ILILSFGKAGMYKKMCSVMDFMEKRFF--------SLTTVTYNIVIETFGKAGRIEKMDD 377
Query: 315 ILRGMPEIGLSPDAVSYSTVIFGFCR 340
+ R M G+ P++++Y +++ + +
Sbjct: 378 VFRKMKYQGVKPNSITYCSLVNAYSK 403
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 123/266 (46%), Gaps = 8/266 (3%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF 98
D T+ L+ CC+ GR + I+ M+ TY ++I + G ++ V
Sbjct: 214 DVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVL 273
Query: 99 AEMIDTGFS-PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
A+MI+ G S P V T N+I+ +Y + R+ G +P++ +FN L+ F
Sbjct: 274 ADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGK 333
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
G ++ ++ M ++ +L TY +I F G++EK ++ +M ++G+ P++ T
Sbjct: 334 AGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSIT 393
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
Y L+ + + + + ++++ + D + +++AY + L +M
Sbjct: 394 YCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQME 453
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGL 303
+ PD +T +T TY A HG+
Sbjct: 454 ERKCKPDKIT-FATMIKTYTA--HGI 476
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 110/237 (46%), Gaps = 5/237 (2%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE-----SDENTYTSLIHLFCDQGQCDKAYKVFAE 100
TYN ++ + G EE +L M E D T S+I + + K ++
Sbjct: 252 TYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSR 311
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
G P + T+N ++L++ + +++ ++ + +R F +++N +++ F G+
Sbjct: 312 FQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGR 371
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+E+ +++ ++M +G+ + TY SL++ + G V K + ++V+ ++ D +
Sbjct: 372 IEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNC 431
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
+I + L+ +L+ +M R PD T+ ++ Y F L+ +MI
Sbjct: 432 IINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMI 488
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 143/370 (38%), Gaps = 51/370 (13%)
Query: 181 KTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQE 240
KTYT L + N + ++A + M+ +G+ P D Y LI + L +AF +
Sbjct: 145 KTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEY 204
Query: 241 MLR-RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
M PD T+T L+S +F + EM + G+ S VTYN I
Sbjct: 205 MKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSY--------LGVGCSTVTYNTI 256
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLS-PDAVSYSTVIFGFCRIRELGKAYK-------LK 351
I G EE +L M E G S PD + +++I + R + K +
Sbjct: 257 IDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMG 316
Query: 352 VEMDKKSISWL----GLWGLYDDIDKSVMQGLSHE------DTFSNLMSDYLAEGHLEKA 401
V+ D + + L G G+Y + SVM + T++ ++ + G +EK
Sbjct: 317 VQPDITTFNILILSFGKAGMYKKM-CSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKM 375
Query: 402 YLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFI-SHVCLRMPTFIIYDTL 460
+ R++ Y P + Y +N +K + + L + S V L P F
Sbjct: 376 DDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFF------ 429
Query: 461 IENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNV 520
NC ++ +G G + + +M E KPD + +I +
Sbjct: 430 --NC----------IINAYGQAGDLATMKELYIQMEERKCKPDKITFATMI----KTYTA 473
Query: 521 HKAYDMYMEM 530
H +D E+
Sbjct: 474 HGIFDAVQEL 483
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D TT+N L+L+ + G ++ ++ M + TY +I F G+ +K VF
Sbjct: 320 DITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVF 379
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+M G P+ TY ++V AY + + +LR ++ + FN ++ +
Sbjct: 380 RKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQA 439
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
G + +EL +M ++ D T+ ++I + G + E++ +M+ I
Sbjct: 440 GDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDI 492
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 138/306 (45%), Gaps = 13/306 (4%)
Query: 60 VEEALGILRGMAESDE--NTY--TSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNA 115
V +AL I + + + N Y S++ G+ D K+F +M G P V TYN
Sbjct: 147 VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNT 206
Query: 116 IVLAYCRDKR-FREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK 174
++ + K + +A+ ++ L G + + + + ++ G+ EEAE +Q+M +
Sbjct: 207 LLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVE 266
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEA 234
G + + Y+SL++ + KG +KA E+ EM G++P+ L+ +
Sbjct: 267 GHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRS 326
Query: 235 FDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHV 294
+L E+ G + + Y LM + +A + D+M KG D G + S
Sbjct: 327 RELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD---GYANS-- 381
Query: 295 TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
+I LC R +EA E+ R D V +T++ +CR E+ ++ +M
Sbjct: 382 ---IMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKM 438
Query: 355 DKKSIS 360
D++++S
Sbjct: 439 DEQAVS 444
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 4/176 (2%)
Query: 69 GMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFRE 128
G AE +E Y L+ G+ ++A +F +M G + ++ A CR KRF+E
Sbjct: 337 GYAE-NEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKE 395
Query: 129 ALGILRCLIERGFEP-NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
A + R E +E +L+ N ++ +C G+ME ++++M+++ ++ D T+ LI
Sbjct: 396 AKELSRD-SETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Query: 188 HLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
F + A++ +M KG + + LI L + +EAF ++ MLR
Sbjct: 455 KYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYN-MLR 509
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/304 (18%), Positives = 116/304 (38%), Gaps = 65/304 (21%)
Query: 110 VATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQ 169
V N I+ + R+++ + + + + G + ++ ++++ ++ F G + +A E+ Q
Sbjct: 98 VQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIK-FVGAKNVSKALEIYQ 155
Query: 170 EMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIG------ 223
+ + ++ S++ GK++ ++ +M G+ PD TY L+
Sbjct: 156 SIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVK 215
Query: 224 -----------------------------SLCLQQTLS-EAFDLFQEMLRRGLSPDNKTY 253
++C S EA + Q+M G SP+ Y
Sbjct: 216 NGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHY 275
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFV--------------------------- 286
+ L+++Y + + KA L EM G +P+ V
Sbjct: 276 SSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELES 335
Query: 287 TGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGK 346
G + + + Y ++ GL + EEA I M G+ D + S +I CR + +
Sbjct: 336 AGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKE 395
Query: 347 AYKL 350
A +L
Sbjct: 396 AKEL 399
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 18/273 (6%)
Query: 87 DQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER-GFEPNL 145
D D+A K+ ++ P+ T+N++++++ R+ I R + E G PN+
Sbjct: 227 DDVSVDEAKKMIGKI-----KPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNV 281
Query: 146 ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE 205
S+N L++ +C +G M EAE++ +EM +G+ D Y ++I C+ +V KA E+ +
Sbjct: 282 YSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRD 341
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKT----YTGLMSAYR 261
M KGI TY L+ C + +++EM R+G D T GL
Sbjct: 342 MGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRD 401
Query: 262 LQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPE 321
Q A ++D + F P S Y ++ LC + + AL I M
Sbjct: 402 GQRVVEAADIVKDAVREAMFYP--------SRNCYELLVKRLCEDGKMDRALNIQAEMVG 453
Query: 322 IGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
G P +Y I G+ + + + L +EM
Sbjct: 454 KGFKPSQETYRAFIDGYGIVGDEETSALLAIEM 486
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 9/238 (3%)
Query: 32 ETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAES-----DENTYTSLIHLFC 86
E +K K + TT+N ++++ R+G E I R M E + +Y L+ +C
Sbjct: 233 EAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYC 292
Query: 87 DQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLI 146
+G +A KV+ EM G + YN ++ C + +A + R + +G E +
Sbjct: 293 ARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCL 352
Query: 147 SFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK---GKVEKAFEMK 203
++ LV G+C G ++ + +EM +KG D T +L+ C+ +V +A ++
Sbjct: 353 TYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIV 412
Query: 204 AEMVHKGIL-PDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
+ V + + P + Y L+ LC + A ++ EM+ +G P +TY + Y
Sbjct: 413 KDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGY 470
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 43/292 (14%)
Query: 92 DKAYKVFAEMIDT----GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS 147
D+ KVF +I + G +P V ++ ++ + K A+ ++R L RG + +
Sbjct: 142 DRVLKVFRSLIKSYNRCGSAPFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQIST 199
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
NAL+ + ++ +E+ LDD + V++A +M +
Sbjct: 200 CNALITEVSRRRGASNGYKMYREV----FGLDDVS-------------VDEAKKMIGK-- 240
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRR-GLSPDNKTYTGLMSAYRLQAQF 266
I P+A T+ ++ S + +++EM G SP+ +Y LM AY +
Sbjct: 241 ---IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLM 297
Query: 267 SKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSP 326
S+A + +EM +G + D V YN +I GLC +A E+ R M G+
Sbjct: 298 SEAEKVWEEMKVRGVVYDIVA--------YNTMIGGLCSNFEVVKAKELFRDMGLKGIEC 349
Query: 327 DAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLW------GLYDDID 372
++Y ++ G+C+ ++ + EM +K GL GL DD D
Sbjct: 350 TCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRD 401
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 138/314 (43%), Gaps = 33/314 (10%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
D + L+ ++GR+E+A + D +YT+LI + +G + A K+F E+
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
V ++NA++ Y ++EAL + + +++ P+ + +V G +E
Sbjct: 228 ----VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 283
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
++ ++ G + K +LI L+ G++E A + + +K ++ ++ LI
Sbjct: 284 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI----SWNTLI 339
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS--AYRLQAQFSKAFHLQDEMIHKG 280
G EA LFQEMLR G +P++ T ++ A+ + H+ + KG
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 399
Query: 281 F---------LPDFVT---GISTSHVTYNAIIH-----------GLCLLDRAEEALEILR 317
L D I +H +N+I+H G + RA+ + ++
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS 459
Query: 318 GMPEIGLSPDAVSY 331
M +IG+ PD +++
Sbjct: 460 RMRKIGIQPDDITF 473
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 128/294 (43%), Gaps = 24/294 (8%)
Query: 63 ALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCR 122
A+ + + + E + + ++ A K++ MI G P+ T+ ++ + +
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 123 DKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKT 182
K F+E I +++ G + +L +L+ + G++E+A ++ + + D +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVS 202
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
YT+LI + ++G +E A ++ E+ K D ++ +I EA +LF++M+
Sbjct: 203 YTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 243 RRGLSPDNKTYTGLMSAYRLQA--QFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAII 300
+ + PD T ++SA + + HL ++ D G ++ NA+I
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQVHL--------WIDDH--GFGSNLKIVNALI 308
Query: 301 HGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
E A + +P D +S++T+I G+ + +A L EM
Sbjct: 309 DLYSKCGELETACGLFERLP----YKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 162/387 (41%), Gaps = 86/387 (22%)
Query: 40 GLADETT--YNKL---VLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKA 94
GL D T YN L +LAC G +E+AL + RGM E D ++ ++I G +A
Sbjct: 199 GLDDRNTVMYNSLMGGLLAC---GMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEA 254
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
+ F EM G + +++ A E I C+I F+ ++ +AL+
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
+C + A+ + M QK + ++T+++ + G+ E+A ++ +M GI PD
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVV----SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL---------------------------- 246
T G I + +L E + + GL
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 247 ---SPDNKTYTGLMSAYRLQAQFSKA---FHLQDEMIHKGFLPDFV--TGI--------- 289
D ++T ++SAY AQF +A L D+M+ G PD V TG+
Sbjct: 431 EMNVRDAVSWTAMVSAY---AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487
Query: 290 -----------STSHVTYNAIIHGLCLLD------RAEEALEILRGMPEIGLSPDAVSYS 332
++ + +I H C++D R EEA+ + GMP PDA+ ++
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWT 544
Query: 333 TVIFGFCRIR---ELGK-AYKLKVEMD 355
T++ CR + E+GK A + +E+D
Sbjct: 545 TLLSA-CRNKGNLEIGKWAAESLIELD 570
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 163/401 (40%), Gaps = 39/401 (9%)
Query: 79 TSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
+ L++++ + G A KVF + D + YN+++ +AL + R
Sbjct: 178 SPLLYMYANVGCISDAKKVFYGLDDR----NTVMYNSLMGGLLACGMIEDALQLFR---- 229
Query: 139 RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK 198
G E + +S+ A+++G G +EA E +EM +GL +D + S++ G + +
Sbjct: 230 -GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 199 AFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
++ A ++ LI C + L A +F M ++ + ++T ++
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV----SWTAMVV 344
Query: 259 AYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRG 318
Y + +A + +M G PD H T I + EE +
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPD--------HYTLGQAISACANVSSLEEGSQFHGK 396
Query: 319 MPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMD-KKSISWLGLWGLYDD------- 370
GL ++++ + + ++ + +L EM+ + ++SW + Y
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 371 ---IDKSVMQGLSHED-TFSNLMSDYLAEGHLEKAY-LLEREINYFDYLPVDVHYSVFLN 425
DK V GL + T + ++S G +EK + + + +P HYS ++
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Query: 426 VLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSN 466
+ ++ R+ EA + FI+ + P I + TL+ C N
Sbjct: 517 LFSRSGRLEEA----MRFINGMPFP-PDAIGWTTLLSACRN 552
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 6/224 (2%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQ--GQCDKAYK 96
+E+T+ L+ A CR G V+ A ++R M++ D Y+ L+ C C
Sbjct: 178 EESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIG 237
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
++ T FSP + Y ++ R +E + +L + EP+L+ + ++QG
Sbjct: 238 YLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVI 297
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+A++L E+ GLA D TY I+ C + +E A +M + M G P+
Sbjct: 298 ADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVV 357
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
TY LI +L LS A L++EM G++ ++ T+ ++SAY
Sbjct: 358 TYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 13/293 (4%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
++ E+ + +I + G+ ++A +VF ++ + PS T NA++L R ++ E +
Sbjct: 105 DTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVP 164
Query: 132 -ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLF 190
IL G +F L+ C G+++ A EL++ M+Q + +D + Y+ L+
Sbjct: 165 EILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSV 224
Query: 191 CNKGKVEKAFEMKA---EMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
C K K F++ ++ P Y ++ L E + +M +
Sbjct: 225 C-KHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVE 283
Query: 248 PDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLD 307
PD YT ++ + KA L DE++ G PD T YN I+GLC +
Sbjct: 284 PDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYT--------YNVYINGLCKQN 335
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
E AL+++ M ++G P+ V+Y+ +I + +L +A L EM+ ++
Sbjct: 336 DIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVN 388
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 40 GLADETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAY 95
GL D T + ++ GR +E + +L M E D YT ++ KA
Sbjct: 250 GLRDYTVVMRFLV---EGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKAD 306
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
K+F E++ G +P V TYN + C+ AL ++ + + G EPN++++N L++
Sbjct: 307 KLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKAL 366
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLF-------CNKGKVEKAFEMKAEMVH 208
G + A+ L +EM G+ + T+ +I + C G +E+AF M
Sbjct: 367 VKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM------ 420
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
+ + +I LC + + +A +L ++
Sbjct: 421 -NVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 22/269 (8%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D Y+ LI + +GQ A +F+EM ++G P + YNA++ A+ + +AL +
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 134 RCLIER--GFE---PNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
R +++ G E PN++++N L++ F GK+++ L ++++ ++ D T+ ++
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 189 LFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
+ G +++ + M PD T+ LI S +Q + F+ ++R P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAII--HGLC-L 305
T+ ++ Y KA + +M ++P F +TY +I +G C
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSF--------ITYECMIMMYGYCGS 363
Query: 306 LDRAEEALEILRGMPEIGLSPDAVSYSTV 334
+ RA E E E+G S + ST+
Sbjct: 364 VSRAREIFE------EVGESDRVLKASTL 386
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 6/245 (2%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAE 100
TYN L+ A + G+V++ + + + S D T+ ++ + G + V
Sbjct: 209 VTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTR 268
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M P + T+N ++ +Y + + F + + L+ +P L +FN+++ + GK +
Sbjct: 269 MRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY-GKAR 327
Query: 161 M-EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
M ++AE + ++MN TY +I ++ G V +A E+ E+ + A T
Sbjct: 328 MIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLN 387
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
++ C EA LF + PD TY L AY + L +M
Sbjct: 388 AMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKD 447
Query: 280 GFLPD 284
G +P+
Sbjct: 448 GIVPN 452
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 129/309 (41%), Gaps = 17/309 (5%)
Query: 28 AAWTETEKTNWKGLADETTYNKLVLA--CCRDG-----RVEEALGILRGMAESDEN--TY 78
A W +E N D + YN L+ A RD +V L ++G+ N TY
Sbjct: 152 AMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTY 211
Query: 79 TSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
L+ F G+ D+ +F ++ + SP V T+N ++ AY ++ +E +L +
Sbjct: 212 NILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRS 271
Query: 139 RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK 198
+P++I+FN L+ + K + E+ E+ + + + T+ S+I + ++K
Sbjct: 272 NECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
Query: 199 AFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
A + +M +P TY +I ++S A ++F+E+ T ++
Sbjct: 332 AEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLE 391
Query: 259 AYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRG 318
Y + +A D++ H ST Y A D E+ +++
Sbjct: 392 VYCRNGLYIEA----DKLFHNASAFRVHPDASTYKFLYKAYTKA----DMKEQVQILMKK 443
Query: 319 MPEIGLSPD 327
M + G+ P+
Sbjct: 444 MEKDGIVPN 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 22/269 (8%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D Y+ LI + +GQ A +F+EM ++G P + YNA++ A+ + +AL +
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 134 RCLIER--GFE---PNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIH 188
R +++ G E PN++++N L++ F GK+++ L ++++ ++ D T+ ++
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 189 LFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
+ G +++ + M PD T+ LI S +Q + F+ ++R P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAII--HGLC-L 305
T+ ++ Y KA + +M ++P F +TY +I +G C
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSF--------ITYECMIMMYGYCGS 363
Query: 306 LDRAEEALEILRGMPEIGLSPDAVSYSTV 334
+ RA E E E+G S + ST+
Sbjct: 364 VSRAREIFE------EVGESDRVLKASTL 386
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 129/309 (41%), Gaps = 17/309 (5%)
Query: 28 AAWTETEKTNWKGLADETTYNKLVLA--CCRDG-----RVEEALGILRGMAESDEN--TY 78
A W +E N D + YN L+ A RD +V L ++G+ N TY
Sbjct: 152 AMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTY 211
Query: 79 TSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
L+ F G+ D+ +F ++ + SP V T+N ++ AY ++ +E +L +
Sbjct: 212 NILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRS 271
Query: 139 RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK 198
+P++I+FN L+ + K + E+ E+ + + + T+ S+I + ++K
Sbjct: 272 NECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
Query: 199 AFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
A + +M +P TY +I ++S A ++F+E+ T ++
Sbjct: 332 AEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLE 391
Query: 259 AYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRG 318
Y + +A D++ H ST Y A D E+ +++
Sbjct: 392 VYCRNGLYIEA----DKLFHNASAFRVHPDASTYKFLYKAYTKA----DMKEQVQILMKK 443
Query: 319 MPEIGLSPD 327
M + G+ P+
Sbjct: 444 MEKDGIVPN 452
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 11/262 (4%)
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
KV EM G P T+N +V Y + +L L +I +G +PN S A+
Sbjct: 930 KVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSL 989
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTY-TSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
C G +++A +L Q M KG L T ++ +KG++ KA + + G++
Sbjct: 990 CDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMM-- 1047
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
A Y +I L + L A L ML+ P + +Y +++ Q KA
Sbjct: 1048 APNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHT 1107
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
EM+ G+S S T++ ++H C + E+ +++ M +G SP + TV
Sbjct: 1108 EMVE--------LGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTV 1159
Query: 335 IFGFCRIRELGKAYKLKVEMDK 356
I F + KA ++ M K
Sbjct: 1160 IDRFRVEKNTVKASEMMEMMQK 1181
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 179/482 (37%), Gaps = 95/482 (19%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
++ Y LI C + + A+ + EM+D PS+ + ++ CR + A +
Sbjct: 738 EQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNL- 796
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ + + + AL++G GKM +AE L+ M GL+ +K Y + +C
Sbjct: 797 ----AEQIDSSYVHY-ALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKG 851
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
K E+ MV K I+ +Y + +CL+ A L + +L +P
Sbjct: 852 NNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVII 911
Query: 254 TGLMSAYRLQAQFSKAFHLQD-----EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDR 308
++ Y +A+ HL+ EM +G LPD T+N ++HG
Sbjct: 912 YNMLIFYMFRAK----NHLEVNKVLLEMQGRGVLPD--------ETTFNFLVHGYSSSAD 959
Query: 309 AEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLY 368
+L L M G+ P+ S V C ++ KA L M+ K W L
Sbjct: 960 YSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKG------WNL- 1012
Query: 369 DDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLN 428
SV+Q + ++ +++G + KA D+L
Sbjct: 1013 ---GSSVVQ--------TKIVETLISKGEIPKAE---------DFL-------------- 1038
Query: 429 KKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKA 488
R+T + P YD +I+ S+ RG + A
Sbjct: 1039 --TRVTRNG-----------MMAPN---YDNIIKKLSD---------------RGNLDIA 1067
Query: 489 ARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVLALIEA 548
+ ML+ P + Y+ +I R + KA D + EMV G +P + + L+
Sbjct: 1068 VHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHK 1127
Query: 549 LC 550
C
Sbjct: 1128 FC 1129
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 124/328 (37%), Gaps = 53/328 (16%)
Query: 56 RDGRVEEALGILRGMAES-----DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSV 110
R+G V+E +L M +E + LI + D KA +F M G P
Sbjct: 159 REGMVKEVELLLMEMERHGDTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLT 218
Query: 111 ATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL---VQGFCGKGKMEEAEEL 167
+ Y ++ R R A I +E E N ++ +++ ++ C K++EA L
Sbjct: 219 SCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVL 278
Query: 168 LQEMNQKGLALDDKTYTSL--------------------------------IHLFCNKGK 195
+++ G L+ Y+ + +H C +
Sbjct: 279 ARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFG 338
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
E+A+ E+ H G D T+G LIG C + + A E++ +G PD +Y
Sbjct: 339 SERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNA 398
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
++S + + + DEM G + S T+ ++ G C + EEA I
Sbjct: 399 ILSGLFRKGLWQHTHCILDEMKENGMM--------LSLSTFKIMVTGYCKARQFEEAKRI 450
Query: 316 LR-----GMPEIGLSPDAVSYSTVIFGF 338
+ G+ E D +S + + GF
Sbjct: 451 VNKMFGYGLIEASKVEDPLSEAFSLVGF 478
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 118/292 (40%), Gaps = 11/292 (3%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDK-RFREALGILRCL 136
+ SLI + G A ++ EM G S ++ ++ + C + R ++ +L
Sbjct: 531 FNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKW 590
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+ ++ + + N LVQ +C KG ++ + +M Q +D+ TYTSLI FC K +
Sbjct: 591 PKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETL 650
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
+ + LPD + G L L + + E LF+ + P +++
Sbjct: 651 NDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFIS--YPLSQSEACR 708
Query: 257 MSAYRLQA-QFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
+ +L FS H + + G YN +I GLC + A I
Sbjct: 709 IFVEKLTVLGFSCIAHSVVKRLEG-------EGCIVEQEVYNHLIKGLCTEKKDSAAFAI 761
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGL 367
L M + P S +I CR + G A+ L ++D + + + GL
Sbjct: 762 LDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSSYVHYALIKGL 813
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 104/253 (41%), Gaps = 9/253 (3%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYK 96
L DETT+N LV +L L M + + + ++ CD G KA
Sbjct: 941 LPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALD 1000
Query: 97 VFAEMIDTGFS-PSVATYNAIVLAYCRDKRFREALGILRCLIERGF-EPNLISFNALVQG 154
++ M G++ S IV +A L + G PN ++ +++
Sbjct: 1001 LWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN---YDNIIKK 1057
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
+G ++ A LL M + +Y S+I+ +++KA + EMV G+ P
Sbjct: 1058 LSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPS 1117
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
T+ L+ C + E+ L + M+ G SP + + ++ +R++ KA + +
Sbjct: 1118 ISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMME 1177
Query: 275 EMIHKGFLPDFVT 287
M G+ DF T
Sbjct: 1178 MMQKCGYEVDFET 1190
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 139/339 (41%), Gaps = 38/339 (11%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMA-ESDENTYTSLIHLFCDQGQCDKAYKVFA 99
+ + + Y+K+ + E+ L + + E D ++H C + ++AY
Sbjct: 288 ILNSSIYSKITIGYNEKQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYME 347
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
E+ GF T+ ++ C + + A+ L ++ +G++P++ S+NA++ G KG
Sbjct: 348 ELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKG 407
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ +L EM + G+ L T+ ++ +C + E+A + +M G++ +
Sbjct: 408 LWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVED 467
Query: 220 PLIGSLCLQQTLSEAFDL--FQEMLRRGLSPDNKTYT------GLMSAYRLQAQFSKAFH 271
P LSEAF L F + R ++ T++ L + L
Sbjct: 468 P----------LSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQ 517
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
+ ++ + LP+F N++I + AL +L M G S+
Sbjct: 518 RVNMVLDRSVLPEF-----------NSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSF 566
Query: 332 STVIFGFCRIRE--------LGKAYKLKVEMDKKSISWL 362
+ ++ C R L K KL ++D +++++L
Sbjct: 567 AVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFL 605
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 120/299 (40%), Gaps = 20/299 (6%)
Query: 48 NKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEMID 103
N+++ + CR E A + + + DE T+ LI C +G +A +E++
Sbjct: 327 NRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMS 386
Query: 104 TGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEE 163
G+ P V +YNAI+ R ++ IL + E G +L +F +V G+C + EE
Sbjct: 387 KGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEE 446
Query: 164 AEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIG 223
A+ ++ +M GL K L F G A +K + + A+ + L
Sbjct: 447 AKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRD--NDSTFSKAEFFDDLGN 504
Query: 224 SLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
L L L +L R + P+ + L+ A L DEM
Sbjct: 505 GLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMAR----- 556
Query: 284 DFVTGISTSHVTYNAIIHGLCLLDRA--EEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
G S ++ ++ LC RA ++ +L P++ D + + ++ +C+
Sbjct: 557 ---WGQKLSRRSFAVLMRSLC-ASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCK 611
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 3/198 (1%)
Query: 30 WTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESD--ENTYTSLIHLFCD 87
W E W L K+V G + +A L + + Y ++I D
Sbjct: 1002 WQVMESKGW-NLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSD 1060
Query: 88 QGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS 147
+G D A + M+ P ++Y++++ R + +A+ ++E G P++ +
Sbjct: 1061 RGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSIST 1120
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
++ LV FC ++ E+E L++ M G + + + ++I F + KA EM M
Sbjct: 1121 WSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQ 1180
Query: 208 HKGILPDADTYGPLIGSL 225
G D +T+ LI ++
Sbjct: 1181 KCGYEVDFETHWSLISNM 1198
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF-------EMKAEMVHKGILPDA 215
+A L M +KGL Y LI + E A+ E +AE+ H I
Sbjct: 201 KAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNI---- 256
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
D+ G +I LCL Q + EA L ++++ G ++ Y+ + Y + F E
Sbjct: 257 DSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGE 316
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
+ ++ PD G N I+H LC +E A + + +G D V++ +I
Sbjct: 317 VKYE---PDVFVG--------NRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILI 365
Query: 336 FGFC 339
G+C
Sbjct: 366 -GWC 368
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 91/221 (41%), Gaps = 7/221 (3%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAEM 101
+ K++ C D +V+EA + R + + + Y+ + + ++ + E+
Sbjct: 258 SIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEV 317
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ P V N I+ + CR A + L GF+ + ++F L+ C +G +
Sbjct: 318 ---KYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDI 374
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+ A L E+ KG D +Y +++ KG + + EM G++ T+ +
Sbjct: 375 KRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIM 434
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRL 262
+ C + EA + +M GL +K L A+ L
Sbjct: 435 VTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSL 475
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 4/211 (1%)
Query: 40 GLADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAY 95
G + + Y+ L+ C+ GR+++AL ++ M+ +TY ++ + + ++A+
Sbjct: 103 GFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAW 162
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
+V M S V YN + ++C D A ++R + E G P+ S++ALV G
Sbjct: 163 RVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGA 222
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
C GK+E A +L+ M + G+ + T+ +I G E K + D+
Sbjct: 223 CRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVMAYAGKDLRLDS 282
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL 246
+++G L G L ++ EA + +EM+ RGL
Sbjct: 283 ESFGFLAGKLVKRKRYEEAMIVVKEMVMRGL 313
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
Y LI C G+++ A + +M + + TY P++ SL + + EA+ + + M
Sbjct: 110 YDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESMR 169
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
+ +S D Y ++++ + A + ++ G PD +Y+A++ G
Sbjct: 170 SKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPD--------SRSYDALVLG 221
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVE 353
C + E A+ ILR M E G++ +++ VI G G Y L +E
Sbjct: 222 ACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVE----GGYYALGLE 268
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 211 ILPDAD-------TYGPLIGSLCLQQTLSEAFDLFQEML--RRGLSPDNKTYTGLMSAYR 261
+LP D Y LI LC + +A + +M R GL+P TY ++ +
Sbjct: 96 VLPQIDGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTP--STYHPILCSLT 153
Query: 262 LQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPE 321
+ + +A+ + + M K +S YN + C E A E++R + E
Sbjct: 154 RKYKIEEAWRVVESMRSKS--------VSMDVTAYNYFLTSHCYDGELESASEVMRKIEE 205
Query: 322 IGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWL 362
G SPD+ SY ++ G CR ++ A + M++ ++ L
Sbjct: 206 DGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVL 246
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 200/436 (45%), Gaps = 56/436 (12%)
Query: 48 NKLVLACCRDGRVEEALGILRGMAESDENTYTS-LIHLFCDQGQCDKAYKVFAEMIDTGF 106
NK++ C R G ++ AL + GM + T+ S LI + D + +A+++F E+ +
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE--- 121
Query: 107 SPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEE 166
P +YN ++ Y R+ F +A + +R + S+N ++ G+ +G+ME+A E
Sbjct: 122 -PDTFSYNIMLSCYVRNVNFEKA----QSFFDRMPFKDAASWNTMITGYARRGEMEKARE 176
Query: 167 LLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLC 226
L M +K ++ ++ ++I + G +EKA +G++ + +I
Sbjct: 177 LFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV----AWTAMITGYM 228
Query: 227 LQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFV 286
+ + A +F++M ++ + T+ ++S Y ++ L M+ +G P+
Sbjct: 229 KAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN-S 284
Query: 287 TGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGK 346
+G+S++ + G L + +I + + + L D + +++I +C+ ELG
Sbjct: 285 SGLSSA-------LLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGD 337
Query: 347 AYKLKVEMDKKS-ISWLGL---WGLYDDIDKSVMQGLSHEDTFSNLMSDY-------LAE 395
A+KL M KK ++W + + + + DK++ L E + + D+ LA
Sbjct: 338 AWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC--LFREMIDNKIRPDWITFVAVLLAC 395
Query: 396 GHLEKAYLLEREINYFDYL-------PVDVHYSVFLNVLNKKARITEAKHHLLWFISHVC 448
H A L+ + YF+ + P HY+ +++L + ++ EA L I +
Sbjct: 396 NH---AGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEA----LKLIRSMP 448
Query: 449 LRMPTFIIYDTLIENC 464
R P ++ TL+ C
Sbjct: 449 FR-PHAAVFGTLLGAC 463
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 137/329 (41%), Gaps = 43/329 (13%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVF---- 98
D ++N ++ R G +E+A + M E +E ++ ++I + + G +KA F
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAP 213
Query: 99 ------------------------AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILR 134
A D + ++ T+NA++ Y + R + L + R
Sbjct: 214 VRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFR 273
Query: 135 CLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKG 194
++E G PN ++ + G ++ ++ Q +++ L D TSLI ++C G
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 195 KVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYT 254
++ A+++ M K ++ + +I +A LF+EM+ + PD T+
Sbjct: 334 ELGDAWKLFEVMKKKDVV----AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389
Query: 255 GLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALE 314
++ A + + M+ D+ H Y ++ L + EEAL+
Sbjct: 390 AVLLACNHAGLVNIGMAYFESMVR-----DYKVEPQPDH--YTCMVDLLGRAGKLEEALK 442
Query: 315 ILRGMPEIGLSPDAVSYSTVIFGFCRIRE 343
++R MP P A + T++ G CR+ +
Sbjct: 443 LIRSMP---FRPHAAVFGTLL-GACRVHK 467
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 13/244 (5%)
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
V A+ +G+ + + ++ Y K + L ++E F P N ++
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 157 G-KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
+G +++A EL + G+ + ++Y L+ FC + A+++ +M+ + ++PD
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
D+Y LI C + ++ A +L +ML +G PD GL Q F + +E
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGLCD----QGMFDEGKKYLEE 281
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
MI KGF P F N ++ G C + EEA +++ + + G + + ++ VI
Sbjct: 282 MISKGFSPHFSVS--------NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 333
Query: 336 FGFC 339
C
Sbjct: 334 PLIC 337
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 14/160 (8%)
Query: 189 LFCNKGKVEKAFEM-KAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
L ++G ++KAFE+ K+ +H G++P+ +Y L+ + CL LS A+ LF +ML R +
Sbjct: 164 LVSHRGYLQKAFELFKSSRLH-GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV 222
Query: 248 PDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLD 307
PD +Y L+ + + Q + A L D+M++KGF+PD +I GLC
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD------------RTLIGGLCDQG 270
Query: 308 RAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA 347
+E + L M G SP + ++ GFC ++ +A
Sbjct: 271 MFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 5/164 (3%)
Query: 77 TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCL 136
+Y L+ FC AY++F +M++ P V +Y ++ +CR + A+ +L +
Sbjct: 192 SYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDM 251
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+ +GF P+ L+ G C +G +E ++ L+EM KG + L+ FC+ GKV
Sbjct: 252 LNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKV 307
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQE 240
E+A ++ ++ G +DT+ +I +C + SE LF E
Sbjct: 308 EEACDVVEVVMKNGETLHSDTWEMVIPLIC-NEDESEKIKLFLE 350
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 84 LFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEP 143
L +G KA+++F G P+ +YN ++ A+C + A + ++ER P
Sbjct: 164 LVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP 223
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
++ S+ L+QGFC KG++ A ELL +M KG D +LI C++G ++ +
Sbjct: 224 DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYL 279
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
EM+ KG P L+ C + EA D+ + +++ G + + T+
Sbjct: 280 EEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTW 329
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
+ D +Y L+ CR G+V A+ +L M +LI CDQG D+ K E
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGLCDQGMFDEGKKYLEE 281
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
MI GFSP + N CL+ +GF C GK
Sbjct: 282 MISKGFSPHFSVSN--------------------CLV-KGF--------------CSFGK 306
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK 198
+EEA ++++ + + G L T+ +I L CN+ + EK
Sbjct: 307 VEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 153/365 (41%), Gaps = 21/365 (5%)
Query: 19 PDVMIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAE-SDENT 77
PD ++ +A + A E T +L C R +E + + + +E
Sbjct: 46 PDKALKIYANVSDHSASPVSSRYAQELTVRRLA-KCRRFSDIETLIESHKNDPKIKEEPF 104
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
Y++LI + + A + F +M G S ++NA++ A K F + + +
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 138 ER--GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
+R P+ IS+ L++ +C G E+A E++++M KG+ + +T+++ KG+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
+E A + EMV KG D Y I S +++ +L +EM GL PD +Y
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
LM+AY + +A + + + P+ T+ +I LC E+ I
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPN--------AATFRTLIFHLCYSRLYEQGYAI 335
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK-SISWLGLW-------GL 367
+ + PD + ++ G ++ A L + KK S+L W GL
Sbjct: 336 FKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGL 395
Query: 368 YDDID 372
Y D
Sbjct: 396 YSKTD 400
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 129/276 (46%), Gaps = 21/276 (7%)
Query: 67 LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRF 126
L+G SD +SL+ L+ D G+ + AYKVF EM + +V ++ A++ + ++ R
Sbjct: 147 LKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPER----NVVSWTAMISGFAQEWRV 202
Query: 127 REALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSL 186
L + + + +PN +F AL+ G G + + + + GL SL
Sbjct: 203 DICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSL 262
Query: 187 IHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML-RRG 245
I ++C G ++ AF + + +K D ++ +I +A +LF+ M+ + G
Sbjct: 263 ISMYCKCGDLKDAFRIFDQFSNK----DVVSWNSMIAGYAQHGLAMQAIELFELMMPKSG 318
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCL 305
PD TY G++S+ R + + M G P+ +H Y+ ++ L
Sbjct: 319 TKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPEL------NH--YSCLVDLLGR 370
Query: 306 LDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
+EALE++ MP + P++V + +++F CR+
Sbjct: 371 FGLLQEALELIENMP---MKPNSVIWGSLLFS-CRV 402
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 189/460 (41%), Gaps = 93/460 (20%)
Query: 15 RVPPPDV-----MIRGFAAAWTETEKTNW------KGLA--DETTYNKLVLACCRDGRVE 61
RVP P +I+G++ + E + GLA DE T+ ++ C +G+V
Sbjct: 68 RVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVR 127
Query: 62 EALGI----LRGMAESDENTYTSLIHLFCDQGQCD---KAYKVFAEMIDTGFSPSVATYN 114
+ LR + D TS + + G+C A KVF EM + + ++
Sbjct: 128 VGSSVHGLVLRIGFDKDVVVGTSFVDFY---GKCKDLFSARKVFGEMPER----NAVSWT 180
Query: 115 AIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK 174
A+V+AY + EA + + ER NL S+NALV G G + A++L EM ++
Sbjct: 181 ALVVAYVKSGELEEAKSMFDLMPER----NLGSWNALVDGLVKSGDLVNAKKLFDEMPKR 236
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEA 234
D +YTS+I + G + A ++ E +G+ D + LI +EA
Sbjct: 237 ----DIISYTSMIDGYAKGGDMVSARDLFEEA--RGV--DVRAWSALILGYAQNGQPNEA 288
Query: 235 FDLFQEMLRRGLSPDNKTYTGLMSA------YRLQAQFSKAFHLQDEMIHKGFLPDFVTG 288
F +F EM + + PD GLMSA + L + H + ++ +
Sbjct: 289 FKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALID 348
Query: 289 ISTS------------------HVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVS 330
++ V+Y +++ G+ + EA+ + M + G+ PD V+
Sbjct: 349 MNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVA 408
Query: 331 YSTVIFGFC---RIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSN 387
+ TVI C R+ E G Y E+ +K S++ H N
Sbjct: 409 F-TVILKVCGQSRLVEEGLRY---FELMRKKY--------------SILASPDHYSCIVN 450
Query: 388 LMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVL 427
L+S G L++AY L + +P + H S + ++L
Sbjct: 451 LLS---RTGKLKEAYELIKS------MPFEAHASAWGSLL 481
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 28/287 (9%)
Query: 48 NKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFS 107
N LV C+ G +++A + M + + +TS++ + G+ D+A +F S
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFER------S 239
Query: 108 P--SVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
P V + A++ Y + RF EAL + RC+ G P+ +L+ G G +E+ +
Sbjct: 240 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK 299
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSL 225
+ +N+ + +D T+L+ ++ G +E A E+ E+ + D ++ LI L
Sbjct: 300 WIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER----DTASWTSLIYGL 355
Query: 226 CLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYR---LQAQFSKAFHLQDEMIHKGFL 282
+ A DL+ EM G+ D T+ +++A A+ K FH E
Sbjct: 356 AMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTE--RHNVQ 413
Query: 283 PDFVTGISTSHVTYNAIIHGLC---LLDRAEEALEILRGMPEIGLSP 326
P + H + +I LC LLD AEE ++ +RG + L P
Sbjct: 414 P------KSEHCS--CLIDLLCRAGLLDEAEELIDKMRGESDETLVP 452
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 132/329 (40%), Gaps = 71/329 (21%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
E D SL+ ++ G+ + +KVF EM V ++N ++ +Y + RF +A+G
Sbjct: 78 EFDSYVSNSLMGMYASLGKIEITHKVFDEMPQR----DVVSWNGLISSYVGNGRFEDAIG 133
Query: 132 ILRCLIERG-----------------------------------FEPNLISFNALVQGFC 156
+ + + + FE ++ NALV FC
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFC 193
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
G +++A + M K + K +TS++ + + G++++A + + + D
Sbjct: 194 KCGCLDKARAVFDSMRDKNV----KCWTSMVFGYVSTGRIDEA----RVLFERSPVKDVV 245
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
+ ++ EA +LF+ M G+ PDN L++ Q +
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE-----QGKW 300
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDR------AEEALEILRGMPEIGLSPDAVS 330
IH G+ I+ + VT + ++ G L+D E ALE+ + E D S
Sbjct: 301 IH-GY-------INENRVTVDKVV-GTALVDMYAKCGCIETALEVFYEIKE----RDTAS 347
Query: 331 YSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
++++I+G G+A L EM+ +
Sbjct: 348 WTSLIYGLAMNGMSGRALDLYYEMENVGV 376
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 9/230 (3%)
Query: 93 KAYKVFAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
+A +V+ EM G P + TYN ++ C + I+ + + +P SF +
Sbjct: 164 EANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLM 223
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
+ GF + K +E ++++ M++ G+ + TY +I C + K +A + ++ +
Sbjct: 224 IDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRM 283
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
P++ TY LI C ++ L EA +LF+ M+ G PD++ Y L+ F A
Sbjct: 284 RPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALI 343
Query: 272 LQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPE 321
L E + K ++P F +++GL + +EA E++ + E
Sbjct: 344 LCRESMEKNWVPSF--------SVMKWLVNGLASRSKVDEAKELIAVVKE 385
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 5/232 (2%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA-----ESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
+ N L+ AC +EA + M E D TY +I + C+ G +Y + AE
Sbjct: 148 SLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAE 207
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
M P+ A++ ++ + ++++F E ++R + E G + ++N ++Q C + K
Sbjct: 208 MERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKK 267
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
EA+ L+ + + + TY+ LIH FC++ +++A + MV G PD++ Y
Sbjct: 268 SAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFT 327
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHL 272
LI LC A L +E + + P L++ +++ +A L
Sbjct: 328 LIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKEL 379
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
TYN ++ C+ + EA ++ G+ + TY+ LIH FC + D+A +F M
Sbjct: 254 TYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVM 313
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
+ G+ P Y ++ C+ F AL + R +E+ + P+ LV G + K+
Sbjct: 314 VCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKV 373
Query: 162 EEAEELLQEMNQK 174
+EA+EL+ + +K
Sbjct: 374 DEAKELIAVVKEK 386
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 105/243 (43%), Gaps = 16/243 (6%)
Query: 113 YNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM-EEAEELLQEM 171
++ V+ R+K F +L I+ +P SF G+ M + + + + +
Sbjct: 78 FSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNL 137
Query: 172 NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK-GILPDADTYGPLIGSLCLQQT 230
Q + K+ +L+ ++A + EM GI PD +TY +I LC +
Sbjct: 138 EQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGS 197
Query: 231 LSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFS---KAFHLQDEMIHKGFLPDFVT 287
S ++ + EM R+ + P ++ ++ + + +F K + DE
Sbjct: 198 TSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEF----------- 246
Query: 288 GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA 347
G+ TYN +I LC ++ EA ++ G+ + P++V+YS +I GFC L +A
Sbjct: 247 GVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEA 306
Query: 348 YKL 350
L
Sbjct: 307 MNL 309
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 123/286 (43%), Gaps = 9/286 (3%)
Query: 82 IHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGI-LRCLIERG 140
I L+ D++ + F + +V + NA++ A K ++EA + L G
Sbjct: 118 IILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYG 177
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
EP+L ++N +++ C G + ++ EM +K + ++ +I F + K ++
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
++ M G+ TY +I LC ++ +EA L ++ + P++ TY+ L+ +
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
+ +A +L + M+ G+ PD Y +IH LC E AL + R
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPD--------SECYFTLIHCLCKGGDFETALILCRESM 349
Query: 321 EIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWG 366
E P ++ G ++ +A +L + +K + LW
Sbjct: 350 EKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWN 395
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 59 RVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVL 118
R+ + G+ G+A TY +I C + + +A + ++ P+ TY+ ++
Sbjct: 241 RMMDEFGVHVGVA-----TYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIH 295
Query: 119 AYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLAL 178
+C ++ EA+ + ++ G++P+ + L+ C G E A L +E +K
Sbjct: 296 GFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVP 355
Query: 179 DDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQ 229
L++ ++ KV++A E+ A +V + + D + + +L L Q
Sbjct: 356 SFSVMKWLVNGLASRSKVDEAKELIA-VVKEKFTRNVDLWNEVEAALPLPQ 405
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 122/291 (41%), Gaps = 13/291 (4%)
Query: 29 AWTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGI---LRGMAESDENTYTSLIHLF 85
A+ + EK ++ +N L+ A C + ++EA I L D T L+ F
Sbjct: 161 AFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGF 220
Query: 86 CDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNL 145
+ G + EM+ GF P+ TY + +C+ + F EAL + + F+ +
Sbjct: 221 KEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITV 280
Query: 146 ISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAE 205
L+ G +A +L E++++GL D Y +L+ G V A ++ E
Sbjct: 281 QILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKE 340
Query: 206 MVHKGILPDADTYGPL-IGSLCLQQ-TLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQ 263
M KGI PD+ T+ + IG + ++ + + +Q+M R L P T LM +
Sbjct: 341 MEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHN 400
Query: 264 AQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALE 314
+ + L M+ KG+ P H + LC RA +A E
Sbjct: 401 GEVNLGLDLWKYMLEKGYCPH-------GH-ALELLTTALCARRRANDAFE 443
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 18/224 (8%)
Query: 143 PNLISFNALVQGFCGKGKMEEAEELLQ-------EMNQKGLALDDKTYTSLIHLFCNKGK 195
PNL+SF ++ C K EE L+ E+ +K +D+ + L+ FC + +
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDE--FNILLRAFCTERE 191
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTG 255
+++A + E +H PD T L+ ++ + EM++RG P++ TY
Sbjct: 192 MKEARSI-FEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGI 250
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEI 315
+ + + F +A L ++M F D I T+ +IHG + +A ++
Sbjct: 251 RIDGFCKKRNFGEALRLFEDMDRLDF--DITVQILTT------LIHGSGVARNKIKARQL 302
Query: 316 LRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
+ + GL+PD +Y+ ++ + ++ A K+ EM++K I
Sbjct: 303 FDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGI 346
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 15/270 (5%)
Query: 3 LLRVLFKTFLRNRVPPPDVMIRGFAAAWTETEKTNWKGLADETTYNKLVLACCRDGRVEE 62
+LR+ K L++++ IR W ++ YN ++ C R ++E
Sbjct: 635 MLRIYQKCDLQDKLQHLYYRIRKSGIHW------------NQEMYNCVINCCARALPLDE 682
Query: 63 ALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVA---TYNAIVLA 119
G M T ++ D K +K E+ V +YN I+ A
Sbjct: 683 LSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAA 742
Query: 120 YCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD 179
Y ++K + ++ + GF +L ++N L+ + +ME+ +L+ M + D
Sbjct: 743 YGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPD 802
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQ 239
TY +I+++ +G +++ ++ E+ G+ PD +Y LI + + + EA L +
Sbjct: 803 HYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVK 862
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKA 269
EM R + PD TYT L++A R +F +A
Sbjct: 863 EMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 9/251 (3%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
++ Y +I+ D+ F EMI GF+P+ T+N ++ Y + K F++ + L
Sbjct: 663 NQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKK-VNEL 721
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
L +R ++IS+N ++ + ++ M G ++ + Y +L+ +
Sbjct: 722 FLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKD 781
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
++EK + M PD TY +I Q + E D+ +E+ GL PD +Y
Sbjct: 782 KQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSY 841
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
L+ AY + +A L EM + +PD VTY ++ L D EA+
Sbjct: 842 NTLIKAYGIGGMVEEAVGLVKEMRGRNIIPD--------KVTYTNLVTALRRNDEFLEAI 893
Query: 314 EILRGMPEIGL 324
+ M ++G+
Sbjct: 894 KWSLWMKQMGI 904
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 175/422 (41%), Gaps = 32/422 (7%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFC----DQGQCDKAYKVF 98
++T+++ LV+A + G V++ LG+LR D + L HL + GQ A K++
Sbjct: 487 NQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIY 546
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+++ ++ + ++ Y F EA + L G + I F+ +V+ +
Sbjct: 547 NHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKA 606
Query: 159 GKMEEAEELLQEMN-QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
G +EEA +L+ M+ QK + D + ++ ++ +K + + GI + +
Sbjct: 607 GSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEM 666
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
Y +I L E F+EM+R G +P+ T+ L+ Y F K L
Sbjct: 667 YNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNEL----- 721
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
FL G+ ++YN II ++ M G S +Y+T++
Sbjct: 722 ---FLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDA 777
Query: 338 FCRIRELGKAYKLKVEMDKKS-----------ISWLGLWGLYDDIDKSVMQGLSHED--- 383
+ + +++ K + M K + I+ G G D++ V++ L
Sbjct: 778 YGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEV-ADVLKELKESGLGP 836
Query: 384 ---TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHL 440
+++ L+ Y G +E+A L +E+ + +P V Y+ + L + EA
Sbjct: 837 DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWS 896
Query: 441 LW 442
LW
Sbjct: 897 LW 898
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 131/323 (40%), Gaps = 16/323 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES-----DENTYTSLIHLFCDQGQCDKAYKV 97
D ++ +V + G +EEA +L M E D + ++ ++ DK +
Sbjct: 592 DRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHL 651
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
+ + +G + YN ++ R E G +I GF PN ++FN L+ + G
Sbjct: 652 YYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVY-G 710
Query: 158 KGKM-EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
K K+ ++ EL + G+ +D +Y ++I + M G +
Sbjct: 711 KAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLE 769
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
Y L+ + + + + + + M + PD+ TY +++ Y Q + + E+
Sbjct: 770 AYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKEL 829
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
G PD + YN +I + EEA+ +++ M + PD V+Y+ ++
Sbjct: 830 KESGLGPDLCS--------YNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVT 881
Query: 337 GFCRIRELGKAYKLKVEMDKKSI 359
R E +A K + M + I
Sbjct: 882 ALRRNDEFLEAIKWSLWMKQMGI 904
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 100/228 (43%), Gaps = 3/228 (1%)
Query: 59 RVEEALGILRGMAESDEN--TYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAI 116
R E+ + L G E ++ + ++I+ +G A K F M++ G P+VAT +
Sbjct: 192 RAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGML 251
Query: 117 VLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGL 176
+ Y ++ EA + + G ++++++ + ++AEE++ M Q +
Sbjct: 252 MGLYQKNWNVEEAEFAFSHMRKFGIVCE-SAYSSMITIYTRLRLYDKAEEVIDLMKQDRV 310
Query: 177 ALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFD 236
L + + +++ + +GK+E A + M G P+ Y LI + A
Sbjct: 311 RLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQG 370
Query: 237 LFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
LF + GL PD +Y ++ + + +A H E+ G+ P+
Sbjct: 371 LFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPN 418
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
Query: 40 GLADETTYNKLVLACCRDGRVEEALGILRGMAESD-----ENTYTSLIHLFCDQGQCDKA 94
G+ E+ Y+ ++ R ++A ++ M + EN + +++ + QG+ + A
Sbjct: 275 GIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLEN-WLVMLNAYSQQGKMELA 333
Query: 95 YKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
+ M GFSP++ YN ++ Y + + A G+ L G EP+ S+ ++++G
Sbjct: 334 ESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEG 393
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKG 210
+ EEA+ QE+ + G + +LI+L G + A + +M G
Sbjct: 394 WGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG 449
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 8/225 (3%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEM 101
+N ++ AC + G V+ A M E + T L+ L+ ++A F+ M
Sbjct: 212 VFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHM 271
Query: 102 IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKM 161
G A Y++++ Y R + + +A ++ + + L ++ ++ + +GKM
Sbjct: 272 RKFGIVCESA-YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKM 330
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
E AE +L M G + + Y +LI + K+E A + + + G+ PD +Y +
Sbjct: 331 ELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSM 390
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF 266
I EA +QE+ R G P++ L + LQA++
Sbjct: 391 IEGWGRADNYEEAKHYYQELKRCGYKPNS---FNLFTLINLQAKY 432
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 146/354 (41%), Gaps = 40/354 (11%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYT--------SLIHLFCDQGQCDK 93
A+E N A R + G RG + ++ L +LF + G+ D
Sbjct: 69 ANENAINSASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLFVNNGEIDV 128
Query: 94 AYKVFAEMIDTGFSPSVATYNAIV--LAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
Y I G S+ N I+ L C D + +RC N ++++ +
Sbjct: 129 NYSA----IKPG--QSLEHCNGILKRLESCSDTNAIKFFDWMRC--NGKLVGNFVAYSLI 180
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTY---TSLIHLFCNKGKVEKAFEMKAEMVH 208
++ + + + AE+L++E+ G K+Y ++I+ KG V+ A + M+
Sbjct: 181 LRVLGRREEWDRAEDLIKELC--GFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLE 238
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSK 268
G+ P+ T G L+G + EA F M + G+ ++ Y+ +++ Y + K
Sbjct: 239 FGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLRLYDK 297
Query: 269 AFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDA 328
A + D M + + +++ + E A IL M G SP+
Sbjct: 298 AEEVIDLMKQDR--------VRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNI 349
Query: 329 VSYSTVIFGFCRIRELGKAYKL-------KVEMDKKSI-SWLGLWGLYDDIDKS 374
++Y+T+I G+ +I ++ A L +E D+ S S + WG D+ +++
Sbjct: 350 IAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEA 403
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
Query: 76 NTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRC 135
++Y+++ ++G+ + +V M GF P+ Y A V A CR + +EA+ ++
Sbjct: 299 DSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINK 358
Query: 136 LIERGF-EPNLISFNALVQGFCGKGKMEEAEELLQEMN-QKGLALDDKTYTSLIHLFCNK 193
+ +G P + +N L++G C GK EA L++M+ Q +++TY +L+ C
Sbjct: 359 EMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRD 418
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
G+ +A ++ EM+ K P +TY +I LC EA +EM+ + + P++ +
Sbjct: 419 GQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVW 478
Query: 254 TGL 256
L
Sbjct: 479 KAL 481
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/487 (20%), Positives = 182/487 (37%), Gaps = 86/487 (17%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
E ++ + S+I F G+ + A +F + + +++ ++ ++ A
Sbjct: 78 ECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACH 137
Query: 132 ILR--CLIERGFEPN--LISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
I R C G+E N + + N L++ C + + A ++ QEMN +G D +Y L+
Sbjct: 138 IFRKYCY---GWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILM 194
Query: 188 HLFCNKGKVEKA----FEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
FC +GK+E+A + M + KG D Y L+ +LC + +A ++ ++LR
Sbjct: 195 KGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILR 254
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGL 303
+GL + Y + ++A ++ E + + + G +Y+A+ L
Sbjct: 255 KGLKAPKRCY------HHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 304 CLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLG 363
+ E E+L M G P Y + CR +L +A +
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV------------- 355
Query: 364 LWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVF 423
I+K +MQG LP Y+V
Sbjct: 356 -------INKEMMQG---------------------------------HCLPTVGVYNVL 375
Query: 424 LNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRG 483
+ L + EA +L V +C NE ++ LV G G
Sbjct: 376 IKGLCDDGKSMEAVGYLKKMSKQV---------------SCVANE-ETYQTLVDGLCRDG 419
Query: 484 LMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVL 543
+A++ + ML ++ P Y+++I C ++A EMV P
Sbjct: 420 QFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWK 479
Query: 544 ALIEALC 550
AL E++C
Sbjct: 480 ALAESVC 486
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 120/299 (40%), Gaps = 48/299 (16%)
Query: 34 EKTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGM--------AESDENTYTSLIHL 84
++ N++G D +Y L+ C +G++EEA +L M + D Y L+
Sbjct: 176 QEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDA 235
Query: 85 FCDQGQCDKAYKVFAEMIDTGFS------------------------------------- 107
CD G+ D A ++ +++ G
Sbjct: 236 LCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAI 295
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEEL 167
P + +Y+A+ + + E +L + +GFEP + A V+ C GK++EA +
Sbjct: 296 PCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV 355
Query: 168 L-QEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK-GILPDADTYGPLIGSL 225
+ +EM Q Y LI C+ GK +A +M + + + +TY L+ L
Sbjct: 356 INKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGL 415
Query: 226 CLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
C EA + +EML + P +TY ++ + +A +EM+ + +P+
Sbjct: 416 CRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPE 474
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 6/188 (3%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF-AE 100
+Y+ + +G++ E +L M E Y + + C G+ +A V E
Sbjct: 300 SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKE 359
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER-GFEPNLISFNALVQGFCGKG 159
M+ P+V YN ++ C D + EA+G L+ + ++ N ++ LV G C G
Sbjct: 360 MMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDG 419
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ EA ++++EM K +TY +I C+ + +A EMV + ++P++ +
Sbjct: 420 QFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWK 479
Query: 220 PLIGSLCL 227
L S+C
Sbjct: 480 ALAESVCF 487
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
Query: 76 NTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRC 135
++Y+++ ++G+ + +V M GF P+ Y A V A CR + +EA+ ++
Sbjct: 299 DSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINK 358
Query: 136 LIERGF-EPNLISFNALVQGFCGKGKMEEAEELLQEMN-QKGLALDDKTYTSLIHLFCNK 193
+ +G P + +N L++G C GK EA L++M+ Q +++TY +L+ C
Sbjct: 359 EMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRD 418
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
G+ +A ++ EM+ K P +TY +I LC EA +EM+ + + P++ +
Sbjct: 419 GQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVW 478
Query: 254 TGL 256
L
Sbjct: 479 KAL 481
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/487 (20%), Positives = 182/487 (37%), Gaps = 86/487 (17%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
E ++ + S+I F G+ + A +F + + +++ ++ ++ A
Sbjct: 78 ECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACH 137
Query: 132 ILR--CLIERGFEPN--LISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
I R C G+E N + + N L++ C + + A ++ QEMN +G D +Y L+
Sbjct: 138 IFRKYCY---GWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILM 194
Query: 188 HLFCNKGKVEKA----FEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
FC +GK+E+A + M + KG D Y L+ +LC + +A ++ ++LR
Sbjct: 195 KGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILR 254
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGL 303
+GL + Y + ++A ++ E + + + G +Y+A+ L
Sbjct: 255 KGLKAPKRCY------HHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 304 CLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLG 363
+ E E+L M G P Y + CR +L +A +
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV------------- 355
Query: 364 LWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVF 423
I+K +MQG LP Y+V
Sbjct: 356 -------INKEMMQG---------------------------------HCLPTVGVYNVL 375
Query: 424 LNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRG 483
+ L + EA +L V +C NE ++ LV G G
Sbjct: 376 IKGLCDDGKSMEAVGYLKKMSKQV---------------SCVANE-ETYQTLVDGLCRDG 419
Query: 484 LMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVHYGFAPHMFSVL 543
+A++ + ML ++ P Y+++I C ++A EMV P
Sbjct: 420 QFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWK 479
Query: 544 ALIEALC 550
AL E++C
Sbjct: 480 ALAESVC 486
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 120/299 (40%), Gaps = 48/299 (16%)
Query: 34 EKTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGM--------AESDENTYTSLIHL 84
++ N++G D +Y L+ C +G++EEA +L M + D Y L+
Sbjct: 176 QEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDA 235
Query: 85 FCDQGQCDKAYKVFAEMIDTGFS------------------------------------- 107
CD G+ D A ++ +++ G
Sbjct: 236 LCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAI 295
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEEL 167
P + +Y+A+ + + E +L + +GFEP + A V+ C GK++EA +
Sbjct: 296 PCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV 355
Query: 168 L-QEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK-GILPDADTYGPLIGSL 225
+ +EM Q Y LI C+ GK +A +M + + + +TY L+ L
Sbjct: 356 INKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGL 415
Query: 226 CLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
C EA + +EML + P +TY ++ + +A +EM+ + +P+
Sbjct: 416 CRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPE 474
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 6/188 (3%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMA----ESDENTYTSLIHLFCDQGQCDKAYKVF-AE 100
+Y+ + +G++ E +L M E Y + + C G+ +A V E
Sbjct: 300 SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKE 359
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER-GFEPNLISFNALVQGFCGKG 159
M+ P+V YN ++ C D + EA+G L+ + ++ N ++ LV G C G
Sbjct: 360 MMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDG 419
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ EA ++++EM K +TY +I C+ + +A EMV + ++P++ +
Sbjct: 420 QFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWK 479
Query: 220 PLIGSLCL 227
L S+C
Sbjct: 480 ALAESVCF 487
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 17/275 (6%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVA-TYNAIVLAYCRDKRFREALGI 132
D+ T++ + G+ + A +F +++D P T AI+ A C + ALG+
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIF-KILDKFSCPQDGFTVTAIISALCSRGHVKRALGV 195
Query: 133 LRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCN 192
+ + L + +L+ G+ + ++EA ++Q+M G+ D + SL+ C
Sbjct: 196 MHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCE 255
Query: 193 K-------GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG 245
+ G V +A + EM I P + +Y L+ L + + E+ + ++M R G
Sbjct: 256 RNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSG 315
Query: 246 LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCL 305
PD +Y ++ L +F K + DEMI +GF P+ Y +I LC
Sbjct: 316 CDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPE--------RKFYYDLIGVLCG 367
Query: 306 LDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
++R AL++ M + Y +I C+
Sbjct: 368 VERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCK 402
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 11/246 (4%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRG----MAESDENTYTSLIHLFCDQGQCDKAYKVF 98
D T ++ A C G V+ ALG++ ++ ++ + Y SL+ + Q +A +V
Sbjct: 172 DGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVI 231
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFR-------EALGILRCLIERGFEPNLISFNAL 151
+M G +P + +N+++ C R EAL I+ + +P +S+N L
Sbjct: 232 QDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNIL 291
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
+ ++ E+ ++L++M + G D +Y ++ + G+ K ++ EM+ +G
Sbjct: 292 LSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGF 351
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH 271
P+ Y LIG LC + ++ A LF++M R + + Y L+ F K
Sbjct: 352 RPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRE 411
Query: 272 LQDEMI 277
L +E +
Sbjct: 412 LWEEAL 417
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 96/221 (43%), Gaps = 27/221 (12%)
Query: 147 SFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEM 206
+F+ + + GK E+A + + +++ D T T++I C++G V++A +
Sbjct: 140 TFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHH- 198
Query: 207 VHKGILP--DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQA 264
HK ++ + Y L+ +Q+ + EA + Q+M G++PD + L++
Sbjct: 199 -HKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTC----- 252
Query: 265 QFSKAFHLQDEMIHK---GFLPDFVT--------GISTSHVTYNAIIHGLCLLDRAEEAL 313
L + +++ G +P+ + I + ++YN ++ L R E+
Sbjct: 253 -------LCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESC 305
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
+IL M G PD SY V+ GK ++ EM
Sbjct: 306 QILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEM 346
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 15/258 (5%)
Query: 109 SVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS-------FNALVQGFCGKGKM 161
S++ N ++ + K++ AL I L++ G EPN +S FN L+ +G
Sbjct: 380 SLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIW 439
Query: 162 EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
LL +M KGL + + +++ + A ++ MV G P +YG L
Sbjct: 440 RWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGAL 499
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF 281
+ +L + EAF ++ M++ G+ P+ YT + S Q +F+ L EM KG
Sbjct: 500 LSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI 559
Query: 282 LPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
P S VT+NA+I G + A E M + P+ ++Y +I
Sbjct: 560 EP--------SVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALAND 611
Query: 342 RELGKAYKLKVEMDKKSI 359
+ AY+L V+ + +
Sbjct: 612 AKPRLAYELHVKAQNEGL 629
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 39 KGLADETT-YNKLVLACCRDGRVEEALGILRGMAESDEN----TYTSLIHLFCDQGQCDK 93
KGL + +N +++AC + A+ I + M ++ E +Y +L+ D+
Sbjct: 452 KGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDE 511
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A++V+ MI G P++ Y + ++F +L+ + +G EP++++FNA++
Sbjct: 512 AFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVIS 571
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKG--- 210
G G A E M + + ++ TY LI N K A+E+ + ++G
Sbjct: 572 GCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKL 631
Query: 211 -------ILPDADTYGPLI 222
++ A+TYG I
Sbjct: 632 SSKPYDAVVKSAETYGATI 650
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 4/217 (1%)
Query: 47 YNKLVLACCRDGRVEEALGILRGMAES---DENTYTSLIHLFCDQG-QCDKAYKVFAEMI 102
+N L+ A + G + +L M + + + + + + C + + A ++F M+
Sbjct: 426 FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMV 485
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
D G P+V +Y A++ A + K + EA + +I+ G EPNL ++ + G+ K
Sbjct: 486 DNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFN 545
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
+ LL+EM KG+ T+ ++I G A+E M + + P+ TY LI
Sbjct: 546 LLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLI 605
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA 259
+L A++L + GL +K Y ++ +
Sbjct: 606 EALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKS 642
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 12/225 (5%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
+ L+ +G ++ +M D G P +NA+++A + A+ I + ++
Sbjct: 426 FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMV 485
Query: 138 ERGFEPNLISFNALVQGFCGKGKM-EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+ G +P +IS+ AL+ KGK+ +EA + M + G+ + YT++ + + K
Sbjct: 486 DNGEKPTVISYGALLSAL-EKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKF 544
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSE-AFDLFQEMLRRGLSPDNKTYTG 255
+ EM KGI P T+ +I S C + LS A++ F M + P+ TY
Sbjct: 545 NLLDTLLKEMASKGIEPSVVTFNAVI-SGCARNGLSGVAYEWFHRMKSENVEPNEITYEM 603
Query: 256 LMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAII 300
L+ A A+ A+ L + ++ G+ S Y+A++
Sbjct: 604 LIEALANDAKPRLAYELHVKAQNE--------GLKLSSKPYDAVV 640
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
Y SL+ G+ A K+ +M + G P++ TYN +++ Y + F +ALGIL
Sbjct: 190 YNSLLGAMRGFGE---AEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTK 246
Query: 138 ERGFEPNLISFNA 150
E+GFEPN I+++
Sbjct: 247 EKGFEPNPITYST 259
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 10/128 (7%)
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFE------PNLISFNA 150
V A + D G P + + A++ + +DKR + A+ ++ L + E PNL +N+
Sbjct: 134 VDAVLKDKGELP-LQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNS 192
Query: 151 LVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKG 210
L+ G G EAE++L++M ++G+ + TY +L+ ++ +G+ KA + KG
Sbjct: 193 LLGAMRGFG---EAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKG 249
Query: 211 ILPDADTY 218
P+ TY
Sbjct: 250 FEPNPITY 257
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 118/284 (41%), Gaps = 19/284 (6%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVFAE 100
TYN + R V E ++ M + D +TY + F + K++
Sbjct: 264 VTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEY 323
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALV-----QGF 155
M+D F PS+ +++L Y + + R + R +E S + V +
Sbjct: 324 MMDGPFKPSIQD-CSLLLRYLSGSPNPDLDLVFR--VSRKYESTGKSLSKAVYDGIHRSL 380
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
G+ +EAEE+ + M G D+ TY+ L+ C ++E+A + +M +G PD
Sbjct: 381 TSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDI 440
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
T+ LI C L +A F ML +G D+ L+ + + +F A E
Sbjct: 441 KTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLME 500
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM 319
M+ + TY +I L + ++EEAL++L+ M
Sbjct: 501 MVKNA-------NVKPWQSTYKLLIDKLLKIKKSEEALDLLQMM 537
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 13/260 (5%)
Query: 92 DKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNAL 151
D ++V + TG S S A Y+ I + RF EA I + + G+EP+ I+++ L
Sbjct: 352 DLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQL 411
Query: 152 VQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI 211
V G C ++EEA +L +M +G D KT+T LI C +++KA A M+ KG
Sbjct: 412 VFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGF 471
Query: 212 LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRG-LSPDNKTYTGLMSAYRLQAQFSKAF 270
D++ LI + A EM++ + P TY L+ + +A
Sbjct: 472 DIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEAL 531
Query: 271 HLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVS 330
L +M+ K P + ++ + L+ A++ L++L SP +
Sbjct: 532 DLL-QMMKKQNYPAYAEA-------FDGYLAKFGTLEDAKKFLDVLSSKD----SPSFAA 579
Query: 331 YSTVIFGFCRIRELGKAYKL 350
Y VI F R L A L
Sbjct: 580 YFHVIEAFYREGRLTDAKNL 599
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 89 GQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISF 148
G+ D+A ++ M + G+ P TY+ +V C+ KR EA G+L + +G P++ ++
Sbjct: 384 GRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 149 NALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV- 207
L+QG C ++++A M +KG +D LI F K E A EMV
Sbjct: 444 TILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVK 503
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRR----------------GLSPDNK 251
+ + P TY LI L + EA DL Q M ++ G D K
Sbjct: 504 NANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAK 563
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
+ ++S+ + F+ FH+ + +G L D
Sbjct: 564 KFLDVLSS-KDSPSFAAYFHVIEAFYREGRLTD 595
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDKAYKVF 98
D TY++LV C+ R+EEA G+L M D T+T LI C + DKA F
Sbjct: 404 DNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACF 463
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG-FEPNLISFNALVQGFCG 157
A M++ GF + ++ + +F A L +++ +P ++ L+
Sbjct: 464 ANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLK 523
Query: 158 KGKMEEAEELLQEMNQKG 175
K EEA +LLQ M ++
Sbjct: 524 IKKSEEALDLLQMMKKQN 541
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 87/209 (41%), Gaps = 10/209 (4%)
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
++ + +++NA ++ + E ++ EM G +D TY + F + +
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETV 318
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLC--LQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
++ M+ P L+ L L F + ++ G S Y G+
Sbjct: 319 KLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHR 378
Query: 259 AYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRG 318
+ +F +A + M + G+ PD ++TY+ ++ GLC R EEA +L
Sbjct: 379 SLTSVGRFDEAEEITKAMRNAGYEPD--------NITYSQLVFGLCKAKRLEEARGVLDQ 430
Query: 319 MPEIGLSPDAVSYSTVIFGFCRIRELGKA 347
M G PD +++ +I G C+ EL KA
Sbjct: 431 MEAQGCFPDIKTWTILIQGHCKNNELDKA 459
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 111/308 (36%), Gaps = 47/308 (15%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
Y+ ++ + Q + + EM GF TY I ++K +A+ +
Sbjct: 126 YSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAVAH-FY 184
Query: 138 ERGFEPNLISFNA-LVQGFCGKGKME-EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
ER + N +S A V KG E E LQEM L L D ++
Sbjct: 185 ERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMK---LVLSDNFVIRVLKELREHPL 241
Query: 196 VEKAF-------EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
AF + H + TY + L +++E + + EM G
Sbjct: 242 KALAFFHWVGGGGSSSGYQHSTV-----TYNAALRVLARPNSVAEFWSVVDEMKTAGYDM 296
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP--------------------DFV-- 286
D TY + ++ ++ L + M+ F P D V
Sbjct: 297 DLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFR 356
Query: 287 -------TGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
TG S S Y+ I L + R +EA EI + M G PD ++YS ++FG C
Sbjct: 357 VSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLC 416
Query: 340 RIRELGKA 347
+ + L +A
Sbjct: 417 KAKRLEEA 424
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 118/539 (21%), Positives = 213/539 (39%), Gaps = 120/539 (22%)
Query: 33 TEKTNWKGLADETTYNKLVLAC-------CRDGRVEEALGILRGMAESDENTYTSLIHLF 85
T+KT + + TT + + C R+G ++EA I R M+ ++ ++I +
Sbjct: 34 TQKT--RNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAY 91
Query: 86 CDQGQCDKAYKVFAEMIDTGFSPSVAT--YNAIVLAYCRDKRFREALGILRCLIERGFEP 143
+ G+ KA++VF EM P T YNA++ A ++K L C I E
Sbjct: 92 AENGKMSKAWQVFDEM------PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP---EK 142
Query: 144 NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMK 203
N +S+ ++ GF G+ +EAE L E K D L+ + GK +A +
Sbjct: 143 NAVSYATMITGFVRAGRFDEAEFLYAETPVK--FRDSVASNVLLSGYLRAGKWNEAVRVF 200
Query: 204 AEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQ 263
M K ++ + ++ C + +A LF M R + T+T ++ Y
Sbjct: 201 QGMAVKEVV----SCSSMVHGYCKMGRIVDARSLFDRMTERNVI----TWTAMIDGYFKA 252
Query: 264 AQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI-----------IHGLCLLDRAEEA 312
F F L M +G D +T V + A IHGL + R
Sbjct: 253 GFFEDGFGLFLRMRQEG---DVKVNSNTLAVMFKACRDFVRYREGSQIHGL--VSRMPLE 307
Query: 313 LEILRGMPEIGL------------------SPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
++ G + + + D+VS++++I G + +++ +AY+L +M
Sbjct: 308 FDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Query: 355 DKKS-ISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDY 413
K +SW ++++ + +G + K + F
Sbjct: 368 PGKDMVSW------------------------TDMIKGFSGKGEISKC------VELFGM 397
Query: 414 LPV--DVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNN-EFK 470
+P ++ ++ ++ EA L WF H L+ E C N+ F
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEA---LCWF--HKMLQK----------EVCPNSYTFS 442
Query: 471 SVVGLVKGFG--MRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMY 527
SV+ + GL + H R+++ N D +V N L+ +C+CGN + AY ++
Sbjct: 443 SVLSATASLADLIEGL-----QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 112/263 (42%), Gaps = 20/263 (7%)
Query: 12 LRNRVPPPDV-----MIRGFAAAWTETEKTNWKGL---ADETTYNKLVLACCRDGRVEEA 63
L ++P D+ MI+GF+ ++ G+ D T+ ++ A +G EEA
Sbjct: 363 LFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEA 422
Query: 64 LGILRGMAESD--ENTYT--SLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLA 119
L M + + N+YT S++ + ++ ++ ++ N++V
Sbjct: 423 LCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSM 482
Query: 120 YCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALD 179
YC+ +A I C+ E PN++S+N ++ G+ G ++A +L + G +
Sbjct: 483 YCKCGNTNDAYKIFSCISE----PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPN 538
Query: 180 DKTYTSLIHLFCNKGKVEKAFE-MKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLF 238
T+ +L+ + G V+ ++ K+ I P D Y ++ L L +A +L
Sbjct: 539 GVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLI 598
Query: 239 QEMLRRGLSPDNKTYTGLMSAYR 261
M P + + L+SA +
Sbjct: 599 STM---PCKPHSGVWGSLLSASK 618
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 137/331 (41%), Gaps = 43/331 (12%)
Query: 42 ADETTYNKLVLACCRDGRVEEALGILR--------GMAESDENTYTSLIHLFCDQGQCDK 93
AD T+YN L+ CC GRV+ A I + G+ + D TY ++I +F D
Sbjct: 333 ADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKW 392
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A KV +M G +P+ T+++++ A +A + ++ G EPN FN L+
Sbjct: 393 ALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLH 452
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
+ + A L Q + KG ++++ Y I +KG+ +K
Sbjct: 453 ACVEACQYDRAFRLFQ--SWKGSSVNESLYADDI---VSKGRTSSPNILK---------- 497
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQ 273
GP GSL + + S Q R P TY L+ A + + L
Sbjct: 498 ---NNGP--GSLVNRNSNSP---YIQASKRFCFKPTTATYNILLKA--CGTDYYRGKELM 547
Query: 274 DEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYST 333
DEM G P+ +T++ +I E A+ ILR M G PD V+Y+T
Sbjct: 548 DEMKSLGLSPN--------QITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTT 599
Query: 334 VIFGFCRIRELGKAYKLKVEMDKKSI--SWL 362
I + L A+ L EM + I +W+
Sbjct: 600 AIKICAENKCLKLAFSLFEEMRRYQIKPNWV 630
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 126/296 (42%), Gaps = 40/296 (13%)
Query: 21 VMIRGFAAA----WTETEKTNWK--GLADET-TYNKLVLACCRDGRVEEALGILRGM--- 70
+I+ FA A W K + K G+ T T++ L+ AC G VE+A + M
Sbjct: 379 TIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLAS 438
Query: 71 -AESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREA 129
E + + L+H + Q D+A+++F G S + + Y +++ R +
Sbjct: 439 GCEPNSQCFNILLHACVEACQYDRAFRLFQSW--KGSSVNESLYADDIVSKGR----TSS 492
Query: 130 LGILR-----CLIERG-------------FEPNLISFNALVQGFCGKGKMEEAEELLQEM 171
IL+ L+ R F+P ++N L++ CG +EL+ EM
Sbjct: 493 PNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CGTDYYR-GKELMDEM 550
Query: 172 NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTL 231
GL+ + T+++LI + G VE A + M G PD Y I + L
Sbjct: 551 KSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCL 610
Query: 232 SEAFDLFQEMLRRGLSPDNKTYTGLMSA---YRLQAQFSKAFHLQDEMIHKGFLPD 284
AF LF+EM R + P+ TY L+ A Y + + + +M + G+ P+
Sbjct: 611 KLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPN 666
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 126/286 (44%), Gaps = 47/286 (16%)
Query: 93 KAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALV 152
K+ ++ +++ P++ N+++ D + L + + + ++ S+N L+
Sbjct: 285 KSRYIYEDLLKENIKPNIYVINSLMNVNSHDLGY--TLKVYKNMQILDVTADMTSYNILL 342
Query: 153 QGFCGKGKMEEAEELLQE---MNQKGL-ALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVH 208
+ C G+++ A+++ +E M GL LD TY ++I +F + + A ++K +M
Sbjct: 343 KTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKS 402
Query: 209 KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSK 268
G+ P+ T+ LI + + +A LF+EML G P+++ + L+ A Q+ +
Sbjct: 403 VGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDR 462
Query: 269 AFHL--------------QDEMIHKGFL--PDFVTG-----------------------I 289
AF L D+++ KG P+ +
Sbjct: 463 AFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCF 522
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
+ TYN ++ C D E++ M +GLSP+ +++ST+I
Sbjct: 523 KPTTATYNILLKA-CGTDYY-RGKELMDEMKSLGLSPNQITWSTLI 566
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 133/326 (40%), Gaps = 53/326 (16%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVF 98
D YN + C R V E I R M E TY+ L+ +F G+ + A V+
Sbjct: 213 DVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVY 272
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
EM++ S A++ A +++++ AL I + ++++G +PNL++ N L+
Sbjct: 273 DEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKA 332
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLI-------------HLF--------------- 190
GK+ ++ + G D+ T+ +L+ LF
Sbjct: 333 GKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYL 392
Query: 191 -------CNK-GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEML 242
C K G EKA ++ EM G+ +Y +I + + A +++ M
Sbjct: 393 YNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMA 452
Query: 243 RRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
+R P+ TY L+ + + L DE + D + + YNA IHG
Sbjct: 453 QRDCKPNTFTYLSLVRSCIWGS-------LWDE------VEDILKKVEPDVSLYNAAIHG 499
Query: 303 LCLLDRAEEALEILRGMPEIGLSPDA 328
+CL + A E+ M E+GL PD
Sbjct: 500 MCLRREFKFAKELYVKMREMGLEPDG 525
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESD-----ENTYTSLIHLFCDQGQCDKAYKV 97
DE T+N L+ A + R E+ L + + + E Y + + G +KA K+
Sbjct: 353 DEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKL 412
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
EM +G + S ++YN ++ A + ++ + AL + + +R +PN ++ +LV+
Sbjct: 413 LYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIW 472
Query: 158 KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADT 217
+E E++L+++ D Y + IH C + + + A E+ +M G+ PD T
Sbjct: 473 GSLWDEVEDILKKVEP-----DVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKT 527
Query: 218 YGPLIGSL 225
++ +L
Sbjct: 528 RAMMLQNL 535
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 113/580 (19%), Positives = 224/580 (38%), Gaps = 91/580 (15%)
Query: 55 CRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYN 114
C +E + + +S +T S++ D V AE I G + ++ +
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 115 AIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK 174
++V Y + ++ A + L E+ N + +NA+++G+ G+ + EL +M
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEK----NDVFWNAMIRGYAHNGESHKVMELFMDMKSS 422
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK-------------------GILPDA 215
G +DD T+TSL+ +E + + ++ K G L DA
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 216 D------------TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA---- 259
T+ +IGS + SEAFDLF+ M G+ D + A
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Query: 260 -----------YRLQAQFSKAFHLQDEMIHK----GFLPD----FVTGISTSHVTYNAII 300
++ + H +I G + D F + S V+ NA+I
Sbjct: 543 HGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI 602
Query: 301 HGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSIS 360
G + EEA+ + + M G++P ++++T++ + L + ++ K+ S
Sbjct: 603 AGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFS 661
Query: 361 ----WLG--LWGLYDDIDK-----SVMQGLSHEDT---FSNLMSDYLAEGHLEKAYLLER 406
+LG L G+Y + ++ LS + ++ +MS + G E+A +
Sbjct: 662 SEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYK 721
Query: 407 EINYFDYLPVDVHYSVFLNVLNKKARITEAK--HHLLWFISHVCLRMPTFIIYDTLIENC 464
E+ + LP + L V + + + E + H L++ ++H + + + D + C
Sbjct: 722 EMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLID-MYAKC 780
Query: 465 SNNEFKSVV--------------GLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLL 510
+ + S V L+ G+ G + A + D M + + PD + +
Sbjct: 781 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGV 840
Query: 511 IFDHCRCGNVHKAYDMYMEMV-HYGFAPHMFSVLALIEAL 549
+ G V ++ M+ YG + V +++ L
Sbjct: 841 LTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 140/350 (40%), Gaps = 69/350 (19%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
+ D +T +SLI ++ G A KVF+ + + SV + NA++ Y ++ EA+
Sbjct: 561 DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW----SVVSMNALIAGYSQNN-LEEAVV 615
Query: 132 ILRCLIERGFEPNLISFNALVQ---------------------GFCGKGK---------- 160
+ + ++ RG P+ I+F +V+ GF +G+
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Query: 161 -----MEEAEELLQEMNQ-KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
M EA L E++ K + L +T ++ G E+A + EM H G+LPD
Sbjct: 676 MNSRGMTEACALFSELSSPKSIVL----WTGMMSGHSQNGFYEEALKFYKEMRHDGVLPD 731
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
T+ ++ + +L E + + D T L+ Y + + D
Sbjct: 732 QATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFD 791
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
EM + ++ V++N++I+G AE+AL+I M + + PD +++ V
Sbjct: 792 EMRRR-----------SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGV 840
Query: 335 IFGFCRIRELGKAYKL------------KVEMDKKSISWLGLWGLYDDID 372
+ ++ K+ +V+ + LG WG + D
Sbjct: 841 LTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEAD 890
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 99/263 (37%), Gaps = 31/263 (11%)
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
++ MI G + A+V Y + R +A R + E +PN + + L G+
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA----RRVFEWIVDPNTVCWTCLFSGY 236
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
G EEA + + M +G D + ++I+ + GK++ A + EM PD
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDV 292
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE 275
+ +I + + A + F M + + T ++SA + A + E
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 276 MIHKGFLPDFVTGIS-----------------------TSHVTYNAIIHGLCLLDRAEEA 312
I G + G S + V +NA+I G + +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKV 412
Query: 313 LEILRGMPEIGLSPDAVSYSTVI 335
+E+ M G + D ++++++
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLL 435
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 15/255 (5%)
Query: 75 ENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILR 134
E ++LI + D A K+F EM G +V ++NA++ A F +
Sbjct: 102 ETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFD 161
Query: 135 CLIER--GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCN 192
+R P+ IS+ L++ +C GK E+A E++++M KG+ + +T+++
Sbjct: 162 EFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYK 221
Query: 193 KGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKT 252
G V++A + EMV+KG D Y + + +++ +L +EM GL PD +
Sbjct: 222 NGLVDEAESLWIEMVNKGCDLDNTVYNVRLMN-AAKESPERVKELMEEMSSVGLKPDTVS 280
Query: 253 YTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEA 312
Y LM+AY ++ S+A + +++G + T+ +I LC+ ++
Sbjct: 281 YNYLMTAYCVKGMMSEA-----KKVYEGLE-------QPNAATFRTLIFHLCINGLYDQG 328
Query: 313 LEILRGMPEIGLSPD 327
L + + + PD
Sbjct: 329 LTVFKKSAIVHKIPD 343
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 111/276 (40%), Gaps = 58/276 (21%)
Query: 107 SPSVAT---YNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEE 163
+P + T + ++ +Y R F A+ + + + G ++SFNAL+ E
Sbjct: 96 NPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFER 155
Query: 164 AEELLQEMNQK--GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPL 221
+L E Q+ + D +Y LI +C+ GK EKA E+ +M KG+ + +
Sbjct: 156 VPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTI 215
Query: 222 IGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYT-GLMSAYRLQAQFSKAFHLQDEMIHKG 280
+GSL + EA L+ EM+ +G DN Y LM+A +
Sbjct: 216 LGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAK------------------- 256
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
+ E E++ M +GL PD VSY+ ++ +C
Sbjct: 257 --------------------------ESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCV 290
Query: 341 IRELGKAYKLKVEMDKKS-------ISWLGLWGLYD 369
+ +A K+ +++ + I L + GLYD
Sbjct: 291 KGMMSEAKKVYEGLEQPNAATFRTLIFHLCINGLYD 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 22/253 (8%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAE------SDENTYTSLIHLFCDQGQCDKAYKVFA 99
++N L+ AC E + + D+ +Y LI +CD G+ +KA ++
Sbjct: 139 SFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMR 198
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
+M G ++ + I+ + ++ EA + ++ +G + + +N + K
Sbjct: 199 DMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMN-AAKE 257
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGI-LPDADTY 218
E +EL++EM+ GL D +Y L+ +C KG + +A+ V++G+ P+A T+
Sbjct: 258 SPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMS-----EAKKVYEGLEQPNAATF 312
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKT----YTGLMSAYRLQAQFSKAFHLQD 274
LI LC+ + +F++ PD KT GL+ R++ A
Sbjct: 313 RTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVA----- 367
Query: 275 EMIHKGFLPDFVT 287
++ K F P VT
Sbjct: 368 RIVKKKFPPRLVT 380
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 140/313 (44%), Gaps = 40/313 (12%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
++ ++ +++ +DGR+++A + + + D TS+IH C +G+ D+A ++F EM
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS 199
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+ SV T+ +V Y ++ R +A I + E+ +S+ +++ G+ G++E
Sbjct: 200 ER----SVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIE 251
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
+AEEL + M K + ++I KG++ KA + M + DA ++ +I
Sbjct: 252 DAEELFEVMPVKPVI----ACNAMISGLGQKGEIAKARRVFDSMKERN---DA-SWQTVI 303
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFL 282
EA DLF M ++G+ P T ++S A + +++ F
Sbjct: 304 KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFD 363
Query: 283 PD-FVTGI----------------------STSHVTYNAIIHGLCLLDRAEEALEILRGM 319
D +V + S + +N+II G EEAL++ M
Sbjct: 364 VDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM 423
Query: 320 PEIGLS-PDAVSY 331
P G + P+ V++
Sbjct: 424 PLSGSTKPNEVTF 436
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 119/532 (22%), Positives = 224/532 (42%), Gaps = 83/532 (15%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTG 105
T N + R G++ EA + +++ S++ + A K+F EM D
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR- 77
Query: 106 FSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAE 165
++ ++N +V Y ++ EA + + ER N++S+ ALV+G+ GK++ AE
Sbjct: 78 ---NIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAE 130
Query: 166 ELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG--PLIG 223
L +M +K + ++T ++ F G+++ A ++ EM+ PD D +I
Sbjct: 131 SLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKL-YEMI-----PDKDNIARTSMIH 180
Query: 224 SLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
LC + + EA ++F EM R + T+T +++ Y + A + D M K
Sbjct: 181 GLCKEGRVDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDARKIFDVMPEK---- 232
Query: 284 DFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRE 343
+ V++ +++ G R E+A E+ MP + P ++ + +I G + E
Sbjct: 233 --------TEVSWTSMLMGYVQNGRIEDAEELFEVMP---VKP-VIACNAMISGLGQKGE 280
Query: 344 LGKAYKLKVEM-DKKSISWLGLWGLYDD-------IDKSV-MQGLSHEDTFSNLMS---- 390
+ KA ++ M ++ SW + +++ +D + MQ TF L+S
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 391 -DYLAEGHLEKAYLLEREINYFDYLPVDVHY-SVFLNVLNKKARITEAKHHLLWFISHVC 448
LA H K + FD VDV+ SV + + K + ++K
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFD---VDVYVASVLMTMYIKCGELVKSK----------- 386
Query: 449 LRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRM-LEGNYKPDGAVY 507
L F D ++ N ++ G+ GL ++A + M L G+ KP+ +
Sbjct: 387 LIFDRFPSKDIIMWN----------SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTF 436
Query: 508 NLLIFDHCRCGNVHKAYDMY--MEMVHYGFAPHMFSVLALIEALCCVRRYNK 557
+ G V + +Y ME V +G P +++ L R+N+
Sbjct: 437 VATLSACSYAGMVEEGLKIYESMESV-FGVKPITAHYACMVDMLGRAGRFNE 487
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 125/291 (42%), Gaps = 36/291 (12%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDT 104
+++N +V + +A + M + + ++ L+ + G+ D+A KVF M +
Sbjct: 49 SSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER 108
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
+V ++ A+V Y + + + + L + E N +S+ ++ GF G++++A
Sbjct: 109 ----NVVSWTALVKGYVHNGK----VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDA 160
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
+L + + K D+ TS+IH C +G+V++A E+ EM + ++ T+ ++
Sbjct: 161 CKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVI----TWTTMVTG 212
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
+ +A +F M + ++T ++ Y + A L + M K
Sbjct: 213 YGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV--- 265
Query: 285 FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
+ NA+I GL +A + M E + S+ TVI
Sbjct: 266 ---------IACNAMISGLGQKGEIAKARRVFDSMKE----RNDASWQTVI 303
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 2/204 (0%)
Query: 72 ESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
E+ + TY I+ +C + +KA +F EM+ GF V Y+ I+ Y + +R +A+
Sbjct: 385 EAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVR 444
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
++ + +RG +PN+ +N+L+ + AE++ +EM + + D +YTS+I +
Sbjct: 445 LMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYN 504
Query: 192 NKGKVEKAFEMKAEM-VHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDN 250
++E+ E+ E +++G + D G ++G + E L Q+M G D
Sbjct: 505 RSKELERCVELYQEFRMNRGKI-DRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDA 563
Query: 251 KTYTGLMSAYRLQAQFSKAFHLQD 274
+ Y+ ++A R S+ LQ+
Sbjct: 564 RLYSSALNALRDAGLNSQIRWLQE 587
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 10/256 (3%)
Query: 81 LIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG 140
++ ++ +G + +V A M + AIV + + + F EA+ + ++
Sbjct: 324 VVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEE 383
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
E +++ + +C K +AE L EM +KG Y++++ ++ ++ A
Sbjct: 384 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 443
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
+ A+M +G P+ Y LI L A +++EM R + PD +YT ++SAY
Sbjct: 444 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAY 503
Query: 261 RLQAQFSKAFHLQDEM-IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGM 319
+ + L E +++G + + GI ++ R +E + +L+ M
Sbjct: 504 NRSKELERCVELYQEFRMNRGKIDRAMAGI---------MVGVFSKTSRIDELMRLLQDM 554
Query: 320 PEIGLSPDAVSYSTVI 335
G DA YS+ +
Sbjct: 555 KVEGTRLDARLYSSAL 570
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 160/455 (35%), Gaps = 101/455 (22%)
Query: 39 KGLADETTYNKLVLACCRDGRVEEA---LGILRGMAESDENTYTSLIHLFCDQGQCDKAY 95
K L D T + L+ +C RD + L + R + + + F
Sbjct: 134 KALPDGQTCSNLIRSCIRDRKFRITHCLLSVFRSDKSLAVSASDAAMKGFNKLQMYSSTI 193
Query: 96 KVFAEMIDT-GFSPSVATYNAIVLAYCRDKRFREALGILRCLIE--RGFEPNLISFNALV 152
+VF + + G PS YCR E +G ++E + F+ +SF A
Sbjct: 194 QVFDRLKQSVGVEPSPG-------CYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKE 246
Query: 153 QG---------FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC------------ 191
G G+ EA E+L+EM KG+ + Y+ LI F
Sbjct: 247 SGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLF 306
Query: 192 -----------------------NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQ 228
+G +E E+ A M + ++ Q
Sbjct: 307 KEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQ 366
Query: 229 QTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGF------- 281
+ +EA +++ ++ TY ++AY +++KA L DEM+ KGF
Sbjct: 367 RGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAY 426
Query: 282 ------------LPDFV--------TGISTSHVTYNAII--HGLCL-LDRAEEALEILRG 318
L D V G + YN++I HG + L RAE +I +
Sbjct: 427 SNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAE---KIWKE 483
Query: 319 MPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQG 378
M + PD VSY+++I + R +EL + +L E G D +M G
Sbjct: 484 MKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNR-------GKIDRAMAGIMVG 536
Query: 379 L----SHEDTFSNLMSDYLAEGHLEKAYLLEREIN 409
+ S D L+ D EG A L +N
Sbjct: 537 VFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALN 571
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 35 KTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQ 90
K +G +E K+ A +DGR EAL + + + D +T+++ + + GQ
Sbjct: 190 KMRTEGFTNEAV--KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQ 247
Query: 91 CDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRD-KRFREALGILRCLIERGFEPNLISFN 149
+ KVF M+ +G SP+ TY+ ++ D K ++A L ++ G PN ++
Sbjct: 248 AKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYT 307
Query: 150 ALVQGFCGKGKMEEAEELLQEMNQKGLALDDK 181
A+ + F +GK E A ELLQEM KG D+K
Sbjct: 308 AVFEAFVREGKEESARELLQEMKGKGFVPDEK 339
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 76 NTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRC 135
N + G+ +A ++F+++ D P V + AIV AY + +E L +
Sbjct: 198 NEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMR 257
Query: 136 LIERGFEPNLISFNALVQGFCGKGKM-EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKG 194
++ G PN +++ L++G GK ++A++ L EM G++ + TYT++ F +G
Sbjct: 258 MLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREG 317
Query: 195 KVEKAFEMKAEMVHKGILPD 214
K E A E+ EM KG +PD
Sbjct: 318 KEESARELLQEMKGKGFVPD 337
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
F+AL + G+ EA EL ++ K D +T+++ + N G+ ++ ++ M+
Sbjct: 204 FDALSKD----GRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRML 259
Query: 208 HKGILPDADTYGPLIGSLCLQ-QTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF 266
G+ P+A TY LI L +T +A EM+ G+SP+ TYT + A+ + +
Sbjct: 260 ASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKE 319
Query: 267 SKAFHLQDEMIHKGFLPD 284
A L EM KGF+PD
Sbjct: 320 ESARELLQEMKGKGFVPD 337
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 96 KVFAEMIDTGFS-PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQG 154
++F +M GF+ +V ++A+ +D R EAL + + ++ P++++ A+V+
Sbjct: 186 EIFHKMRTEGFTNEAVKMFDAL----SKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEA 241
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK-AFEMKAEMVHKGILP 213
+ G+ +E ++ M G++ + TY+ LI GK K A + EM+ G+ P
Sbjct: 242 YANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSP 301
Query: 214 DADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
+A TY + + + A +L QEM +G PD K
Sbjct: 302 NAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEK 339
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 25/301 (8%)
Query: 41 LADETTYNKLV--LACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVF 98
L ++N L+ CR+ ++ A M + + ++ ++I + G A ++F
Sbjct: 229 LKSPASWNILIGGYVNCREMKL--ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELF 286
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG--FEPNLISFNALVQGFC 156
M Y+A++ Y ++ + ++AL + ++ER +P+ I+ +++V
Sbjct: 287 RLM----SKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANS 342
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
G + + + G+ +DD TSLI L+ G KAF+M + + K D
Sbjct: 343 QLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK----DTV 398
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
+Y +I + +EA LF M+ + + P+ T+TGL+SAY + + + M
Sbjct: 399 SYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM 458
Query: 277 IHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
P S H Y ++ L R EEA E+++ MP + P+A + ++
Sbjct: 459 KDHNLEP------SADH--YGIMVDMLGRAGRLEEAYELIKSMP---MQPNAGVWGALLL 507
Query: 337 G 337
Sbjct: 508 A 508
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 146/329 (44%), Gaps = 36/329 (10%)
Query: 29 AWTETEKTNWKGLADETT--YNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFC 86
+ E K + +A++ T +N L+ G ++EA + + E D ++ +I +
Sbjct: 153 GYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYA 212
Query: 87 DQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAY--CRDKRFREALGILRCLIERGFEPN 144
+G A +F+ M S A++N ++ Y CR+ + + R + + N
Sbjct: 213 KKGDMGNACSLFSAMP----LKSPASWNILIGGYVNCREMK------LARTYFDAMPQKN 262
Query: 145 LISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKA 204
+S+ ++ G+ G ++ AEEL + M++K D Y ++I + GK + A ++ A
Sbjct: 263 GVSWITMISGYTKLGDVQSAEELFRLMSKK----DKLVYDAMIACYTQNGKPKDALKLFA 318
Query: 205 EMVHKG--ILPDADTYGPLIGSLCLQQTLSEAFDLFQE--MLRRGLSPDNKTYTGLMSAY 260
+M+ + I PD T ++ + Q + +F + E + G+ D+ T L+ Y
Sbjct: 319 QMLERNSYIQPDEITLSSVVSA--NSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLY 376
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
F+KAF + + K V+Y+A+I G + A EA + M
Sbjct: 377 MKGGDFAKAFKMFSNLNKK------------DTVSYSAMIMGCGINGMATEANSLFTAMI 424
Query: 321 EIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
E + P+ V+++ ++ + + + YK
Sbjct: 425 EKKIPPNVVTFTGLLSAYSHSGLVQEGYK 453
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 44/243 (18%)
Query: 58 GRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI--------------- 102
G V+ A + R M++ D+ Y ++I + G+ A K+FA+M+
Sbjct: 277 GDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSS 336
Query: 103 ---------DTGFSPSVATY-------------NAIVLAYCRDKRFREALGILRCLIERG 140
+T F V +Y +++ Y + F +A + L ++
Sbjct: 337 VVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK- 395
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
+ +S++A++ G G EA L M +K + + T+T L+ + + G V++ +
Sbjct: 396 ---DTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGY 452
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
+ M + P AD YG ++ L L EA++L + M + P+ + L+ A
Sbjct: 453 KCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSM---PMQPNAGVWGALLLAS 509
Query: 261 RLQ 263
L
Sbjct: 510 GLH 512
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/500 (18%), Positives = 189/500 (37%), Gaps = 101/500 (20%)
Query: 66 ILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKR 125
IL+G D ++ L+ + + V+ +M ++G PS +++ A + +
Sbjct: 60 ILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMEN 119
Query: 126 F-------REAL--GILRC------------------LIERGF----EPNLISFNALVQG 154
+AL G+ C L ++ F E N +S+N+L+ G
Sbjct: 120 MVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHG 179
Query: 155 FCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
+ G+++EA + ++ +K D ++ +I + KG + A + + M L
Sbjct: 180 YLESGELDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMP----LKS 231
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
++ LIG + + A F M ++ + ++ ++S Y A L
Sbjct: 232 PASWNILIGGYVNCREMKLARTYFDAMPQK----NGVSWITMISGYTKLGDVQSAEELFR 287
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIG--LSPDAVSYS 332
M K L Y+A+I + ++AL++ M E + PD ++ S
Sbjct: 288 LMSKKDKL------------VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLS 335
Query: 333 TVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKSVMQ-GLSHEDTFSNLMSD 391
+V+ ++ G W ++ + + G+ +D S + D
Sbjct: 336 SVVSANSQLGNTS----------------FGTW-----VESYITEHGIKIDDLLSTSLID 374
Query: 392 -YLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLR 450
Y+ G KA+ + +N D V YS + TEA F + + +
Sbjct: 375 LYMKGGDFAKAFKMFSNLNKKD----TVSYSAMIMGCGINGMATEANS---LFTAMIEKK 427
Query: 451 MPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLL 510
+P ++ + GL+ + GL+++ + + M + N +P Y ++
Sbjct: 428 IPPNVV--------------TFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIM 473
Query: 511 IFDHCRCGNVHKAYDMYMEM 530
+ R G + +AY++ M
Sbjct: 474 VDMLGRAGRLEEAYELIKSM 493
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 130/285 (45%), Gaps = 16/285 (5%)
Query: 44 ETTYNKLVLACCRDGRVEEALGIL---RGMAESDENTYTSLIHLFCD-QGQCDKAYKVFA 99
+ + L+ A CR G +E+A + + + D + +++ +C+ +A +++
Sbjct: 224 DEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWR 283
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
EM + +P+ +Y+ ++ + + ++L + + +RG P + +N+LV +
Sbjct: 284 EMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTRED 343
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+EA +L++++N++GL D TY S+I C GK++ A + A M+ + + P DT+
Sbjct: 344 CFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFH 403
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
+ ++ ++TL ++ +M L P +T+ ++ Q A + EM
Sbjct: 404 AFLEAVNFEKTL----EVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDR- 458
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGL 324
I + Y A I GL E+A EI M G
Sbjct: 459 -------FEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 147 SFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCN-KGKVEKAFEMKAE 205
+F L+ C G +E+AEE + ++K +D + + +++ +CN V +A + E
Sbjct: 226 AFQGLLCALCRHGHIEKAEEFML-ASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWRE 284
Query: 206 MVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQ 265
M + I P+ D+Y +I L ++ L+ EM +RGL+P + Y L+ +
Sbjct: 285 MGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDC 344
Query: 266 FSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLS 325
F +A L ++ +G PD VTYN++I LC + + A +L M LS
Sbjct: 345 FDEAMKLMKKLNEEGLKPD--------SVTYNSMIRPLCEAGKLDVARNVLATMISENLS 396
Query: 326 P---------DAVSYSTV--IFGFCRIRELG 345
P +AV++ + G +I +LG
Sbjct: 397 PTVDTFHAFLEAVNFEKTLEVLGQMKISDLG 427
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 133/325 (40%), Gaps = 17/325 (5%)
Query: 39 KGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHL---FCDQGQCDKAY 95
+G D+ + + ++ + A ++R M ++T ++ + + +A
Sbjct: 150 RGCDDQKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAI 209
Query: 96 KVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
+ F M +P + ++ A CR +A + ++ F ++ FN ++ G+
Sbjct: 210 RTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM-LASKKLFPVDVEGFNVILNGW 268
Query: 156 CG-KGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
C + EA+ + +EM + + +Y+ +I F G + + + EM +G+ P
Sbjct: 269 CNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPG 328
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
+ Y L+ L + EA L +++ GL PD+ TY ++ + A ++
Sbjct: 329 IEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLA 388
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTV 334
MI + P + T H A+ E+ LE+L M L P ++ +
Sbjct: 389 TMISENLSPT----VDTFHAFLEAV--------NFEKTLEVLGQMKISDLGPTEETFLLI 436
Query: 335 IFGFCRIRELGKAYKLKVEMDKKSI 359
+ + ++ A K+ EMD+ I
Sbjct: 437 LGKLFKGKQPENALKIWAEMDRFEI 461
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 180 DKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP-DADTYGPLIGSLC-LQQTLSEAFDL 237
D+ + L+ C G +EKA E + K + P D + + ++ C + ++EA +
Sbjct: 224 DEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRI 281
Query: 238 FQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYN 297
++EM ++P+ +Y+ ++S + + L DEM +G P GI YN
Sbjct: 282 WREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAP----GIEV----YN 333
Query: 298 AIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
++++ L D +EA+++++ + E GL PD+V+Y+++I C +L A + M +
Sbjct: 334 SLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISE 393
Query: 358 SIS 360
++S
Sbjct: 394 NLS 396
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 39 KGLADET-TYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCDQGQCDK 93
+GLA YN LV R+ +EA+ +++ + E D TY S+I C+ G+ D
Sbjct: 323 RGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDV 382
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A V A MI SP+V T++A + A F + L +L + P +F L+
Sbjct: 383 ARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETF-LLIL 437
Query: 154 GFCGKGKM-EEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGIL 212
G KGK E A ++ EM++ + + Y + I + G +EKA E+ +EM KG
Sbjct: 438 GKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKG-- 495
Query: 213 PDADTYGPLIGSLCLQQTLSE 233
+G+ LQ+ L E
Sbjct: 496 --------FVGNPMLQKLLEE 508
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 1/152 (0%)
Query: 26 FAAAWTETEKTNWKGL-ADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHL 84
F A +K N +GL D TYN ++ C G+++ A +L M + + H
Sbjct: 345 FDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHA 404
Query: 85 FCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPN 144
F + +K +V +M + P+ T+ I+ + K+ AL I + N
Sbjct: 405 FLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVAN 464
Query: 145 LISFNALVQGFCGKGKMEEAEELLQEMNQKGL 176
+ A +QG G +E+A E+ EM KG
Sbjct: 465 PALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 119/582 (20%), Positives = 236/582 (40%), Gaps = 100/582 (17%)
Query: 5 RVLFKTFLRNRVPPPDVMIRGFAA------AWTETEKTNWKGLADETTYNKLVLACCRDG 58
RVLF+ + + M+ G+ AWT + + ++ ++ A C DG
Sbjct: 97 RVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP----KNVVSWTVMLTALCDDG 152
Query: 59 RVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVL 118
R E+A+ + M E + ++ +L+ G +KA +VF M S V ++NA++
Sbjct: 153 RSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMP----SRDVVSWNAMIK 208
Query: 119 AYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLAL 178
Y + EA + L E N++++ ++V G+C G + EA L EM ++ +
Sbjct: 209 GYIENDGMEEA----KLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV- 263
Query: 179 DDKTYTSLIHLFCNKGKVEKAFEMKAEMVH--KGILPDADTYGPLI---GSLCLQ-QTLS 232
++T++I F +A + EM + P+ +T L G L ++ + L
Sbjct: 264 ---SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLG 320
Query: 233 EAFDLFQEMLRRG---LSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGI 289
E L +++ G + D + L+ Y + A L +E +
Sbjct: 321 E--QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFD----------L 368
Query: 290 STSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYK 349
+ ++ N + L+RAE E ++ + D VS++++I G+ ++ +A+
Sbjct: 369 QSCNIIINRYLKN-GDLERAETLFERVKSL------HDKVSWTSMIDGYLEAGDVSRAFG 421
Query: 350 LKVEM-DKKSISWLGLWGLYDDIDKSVMQGLSHEDTF---SNLMSDYLAEGHLEKAYLLE 405
L ++ DK ++W ++ GL + F ++L+SD + G
Sbjct: 422 LFQKLHDKDGVTW-----------TVMISGLVQNELFAEAASLLSDMVRCG--------- 461
Query: 406 REINYFDYLPVDVHYSVFLNVLNKKARITEAKH-HLLWFISHVCLRMPTFIIYDTLIE-- 462
P++ YSV L+ + + + KH H + + C P I+ ++L+
Sbjct: 462 -------LKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYD-PDLILQNSLVSMY 513
Query: 463 -NCSNNE-----FKSVV--------GLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYN 508
C E F +V ++ G GL KA ML+ KP+ +
Sbjct: 514 AKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFL 573
Query: 509 LLIFDHCRCGNVHKAYDMYMEMVH-YGFAPHMFSVLALIEAL 549
++ G + + +++ M Y P + +++I+ L
Sbjct: 574 GVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLL 615
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 128/296 (43%), Gaps = 26/296 (8%)
Query: 39 KGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVF 98
K L D+ ++ ++ G V A G+ + + + D T+T +I +A +
Sbjct: 395 KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLL 454
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERG---FEPNLISFNALVQGF 155
++M+ G P +TY+ ++ + + I C+I + ++P+LI N+LV +
Sbjct: 455 SDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHI-HCVIAKTTACYDPDLILQNSLVSMY 513
Query: 156 CGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDA 215
G +E+A E+ +M QK D ++ S+I + G +KA + EM+ G P++
Sbjct: 514 AKCGAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNS 569
Query: 216 DTYGPLIGSLCLQQTLSEAFDLFQEMLRR-GLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
T+ ++ + ++ +LF+ M + P Y ++ + +A +
Sbjct: 570 VTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEA----E 625
Query: 275 EMIHK-GFLPDFVTGISTSHVTYNAIIHGLCLL---DRAEEALEILRGMPEIGLSP 326
E I F PD H Y A++ GLC L D+ E + M + L P
Sbjct: 626 EFISALPFTPD--------HTVYGALL-GLCGLNWRDKDAEGIAERAAMRLLELDP 672
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/502 (20%), Positives = 205/502 (40%), Gaps = 96/502 (19%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
D ++N ++ + +EEA + M+E + T+TS+++ +C G +AY++F EM
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE--RGFEPN---LISFNALVQGFCG 157
+ ++ ++ A++ + ++ +REAL + + + PN LIS A G G
Sbjct: 259 ER----NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISL-AYACGGLG 313
Query: 158 KGKMEEAEELLQEMNQKGLAL---DDKTYTSLIHLFCNKGKVEKA-------FEM----- 202
E+L ++ G D + SL+H++ + G + A F++
Sbjct: 314 VEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNI 373
Query: 203 ------------KAEMVHKGI--LPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP 248
+AE + + + L D ++ +I +S AF LFQ++ +
Sbjct: 374 IINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK---- 429
Query: 249 DNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLP---DFVTGISTSHVTYNAIIHGLCL 305
D T+T ++S F++A L +M+ G P + +S++ T N
Sbjct: 430 DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN-------- 481
Query: 306 LDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM-DKKSISWLGL 364
LD+ + + + PD + ++++ + + + AY++ +M K ++SW
Sbjct: 482 LDQGKH-IHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSW--- 537
Query: 365 WGLYDDIDKSVMQGLSHE---DTFSNLMSDYLAEGHLEKAY-------------LLEREI 408
S++ GLSH D NL + L G + L+ R +
Sbjct: 538 --------NSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGL 589
Query: 409 NYFDYL-------PVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLI 461
F + P HY +++L + ++ EA+ FIS + P +Y L+
Sbjct: 590 ELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEE----FISALPF-TPDHTVYGALL 644
Query: 462 ENCS-NNEFKSVVGLVKGFGMR 482
C N K G+ + MR
Sbjct: 645 GLCGLNWRDKDAEGIAERAAMR 666
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 115/251 (45%), Gaps = 30/251 (11%)
Query: 115 AIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK 174
A++L + A +L + +RG ++ + +L+ + G ++EA L + M ++
Sbjct: 47 ALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER 106
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEA 234
+ T +++ + ++ +A+ + EM + ++ ++ +LC +A
Sbjct: 107 NIV----TCNAMLTGYVKCRRMNEAWTLFREMPKNVV-----SWTVMLTALCDDGRSEDA 157
Query: 235 FDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHV 294
+LF EM R + N TGL+ KA + D M + V
Sbjct: 158 VELFDEMPERNVVSWNTLVTGLIR----NGDMEKAKQVFDAMPSRDV------------V 201
Query: 295 TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEM 354
++NA+I G D EEA + M E + V+++++++G+CR ++ +AY+L EM
Sbjct: 202 SWNAMIKGYIENDGMEEAKLLFGDMSE----KNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
Query: 355 DKKSI-SWLGL 364
+++I SW +
Sbjct: 258 PERNIVSWTAM 268
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Query: 48 NKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFS 107
N LV + G +E+A I M + D ++ S+I G DKA +F EM+D+G
Sbjct: 507 NSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKK 566
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIER-GFEPNLISFNALVQGFCGKGKMEEAEE 166
P+ T+ ++ A L + + + E +P + + +++ GK++EAEE
Sbjct: 567 PNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEE 626
Query: 167 LLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLC 226
+ + D Y +L+ L C +K E AE +L P +LC
Sbjct: 627 FISALP---FTPDHTVYGALLGL-CGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALC 682
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 118/529 (22%), Positives = 212/529 (40%), Gaps = 87/529 (16%)
Query: 8 FKTFLRNRVPPPD-----VMIRGFAAAWTETE-------KTNWKGL-ADETTYNKLVLAC 54
+ +FL + P+ MIRG W + E + + GL D+ TYN + +AC
Sbjct: 83 YSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIAC 142
Query: 55 CRDGRVEEALGILRGM--------AESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGF 106
+ E +G+ R + E D + SLI ++ GQ A K+F E+ +
Sbjct: 143 AK----LEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER-- 196
Query: 107 SPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEE 166
++N+++ Y ++A+ + R + E GFEP+ + +++ G C
Sbjct: 197 --DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSML-GACSHLGDLRTGR 253
Query: 167 LLQEMN-QKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSL 225
LL+EM K + L + LI ++ G ++ A + +M+ K D + +I
Sbjct: 254 LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKK----DRVAWTAMITVY 309
Query: 226 CLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDF 285
SEAF LF EM + G+SPD T + ++SA A L + +
Sbjct: 310 SQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSA----CGSVGALELGKQ------IETH 359
Query: 286 VTGISTSHVTYNAI----IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
+ +S H Y A ++G C R EEAL + MP + +++ +I +
Sbjct: 360 ASELSLQHNIYVATGLVDMYGKC--GRVEEALRVFEAMP----VKNEATWNAMITAYAHQ 413
Query: 342 RELGKAYKL--KVEMDKKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLE 399
+A L ++ + I+++G+ + V GL H+
Sbjct: 414 GHAKEALLLFDRMSVPPSDITFIGV------LSACVHAGLVHQGC--------------- 452
Query: 400 KAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDT 459
Y E + F +P HY+ +++L++ + EA W P I+
Sbjct: 453 -RYFHEMS-SMFGLVPKIEHYTNIIDLLSRAGMLDEA-----WEFMERFPGKPDEIMLAA 505
Query: 460 LIENCSNNEFKSVVGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYN 508
++ C K V K M MK+A A + ++ N D +++
Sbjct: 506 ILGACHKR--KDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWD 552
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 132/313 (42%), Gaps = 18/313 (5%)
Query: 34 EKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAES-----DENTYTSLIHLFCDQ 88
E N + + Y LV A R GR + A +L M S D +TY+ LI F
Sbjct: 175 EMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQV 234
Query: 89 GQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL-RCLIERGFEPNLIS 147
DK + ++M G P+ TYN ++ AY + K F E L + L E +P+ +
Sbjct: 235 FAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWT 294
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
N+ ++ F G G++E E ++ G+ + +T+ L+ + G +K + M
Sbjct: 295 MNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQ 354
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFS 267
TY +I + L + LF+ M + P T L+ AY + S
Sbjct: 355 KYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY---GRAS 411
Query: 268 KAFHLQDEMIHKGFLPDFV--TGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLS 325
KA + G + F+ + I V +N ++ +++ E +L M + G
Sbjct: 412 KADKI-------GGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFK 464
Query: 326 PDAVSYSTVIFGF 338
PD ++Y T++ +
Sbjct: 465 PDKITYRTMVKAY 477
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 122/274 (44%), Gaps = 16/274 (5%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL-RCL 136
Y LI + Q +KA+++F EMI+ G + Y A+V AY R RF A +L R
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 137 IERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+P++ +++ L++ F ++ ++LL +M ++G+ + TY +LI + GK
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY---GKA 269
Query: 197 EKAFEMKAEMVH----KGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKT 252
+ EM++ ++ PD+ T + + + + +++ G+ P+ +T
Sbjct: 270 KMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRT 329
Query: 253 YTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEA 312
+ L+ +Y + K + + M + S + VTYN +I ++
Sbjct: 330 FNILLDSYGKSGNYKKMSAVMEYMQKYHY--------SWTIVTYNVVIDAFGRAGDLKQM 381
Query: 313 LEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGK 346
+ R M + P V+ +++ + R + K
Sbjct: 382 EYLFRLMQSERIFPSCVTLCSLVRAYGRASKADK 415
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 96/222 (43%), Gaps = 5/222 (2%)
Query: 46 TYNKLVLACCRDGRVEEALGILRGM-----AESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
TYN L+ A + E L M + D T S + F GQ + + +
Sbjct: 258 TYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEK 317
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
+G P++ T+N ++ +Y + +++ ++ + + + ++++N ++ F G
Sbjct: 318 FQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGD 377
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
+++ E L + M + + T SL+ + K +K + + + I D +
Sbjct: 378 LKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNC 437
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRL 262
L+ + + +E + + M ++G PD TY ++ AYR+
Sbjct: 438 LVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRI 479
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 213 PDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHL 272
P+ Y LI L + +A +LFQEM+ G +++ YT L+SAY +F AF L
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 273 QDEMIHK-GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSY 331
+ M PD H TY+ +I + ++ ++L M G+ P+ ++Y
Sbjct: 208 LERMKSSHNCQPDV-------H-TYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITY 259
Query: 332 STVIFGFCRIRELGKAYKLKVEMDKKSISWLG 363
+T+I + GKA K+ VEM+ I LG
Sbjct: 260 NTLIDAY------GKA-KMFVEMESTLIQMLG 284
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 8/186 (4%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D TSL+ ++ G+ + A+K+F E+ D SV T+ A+ Y R REA+ +
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR----SVVTWTALFSGYTTSGRHREAIDLF 200
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
+ ++E G +P+ ++ G ++ E +++ M + + + T+L++L+
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC 260
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
GK+EKA + MV K I+ T+ +I E +LF +ML+ L PD +
Sbjct: 261 GKMEKARSVFDSMVEKDIV----TWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSI 316
Query: 254 TGLMSA 259
G +S+
Sbjct: 317 VGFLSS 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 133/303 (43%), Gaps = 35/303 (11%)
Query: 49 KLVLACCRDGRVEEALGILRGMAESD--ENTY--TSLIHLFCDQGQCDKAYKVFAEMIDT 104
+++ AC G ++ I++ M E + +N++ T+L++L+ G+ +KA VF M++
Sbjct: 217 QVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVE- 275
Query: 105 GFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEA 164
+ T++ ++ Y + +E + + +++ +P+ S + G ++
Sbjct: 276 ---KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG 332
Query: 165 EELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGS 224
E + +++ + +LI ++ G + + FE+ EM K I+ I
Sbjct: 333 EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV----IMNAAISG 388
Query: 225 LCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
L + +F +F + + G+SPD T+ GL+ +H G + D
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCG----------------CVHAGLIQD 432
Query: 285 ---FVTGISTSHVTYNAIIHGLCLLD---RAEEALEILRGMPEIGLSPDAVSYSTVIFGF 338
F IS + + H C++D RA + R + ++ + P+A+ + ++ G
Sbjct: 433 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG- 491
Query: 339 CRI 341
CR+
Sbjct: 492 CRL 494
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 109/261 (41%), Gaps = 20/261 (7%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
Y SLI+ F + + +F + G T+ ++ A R + + + ++
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVE 197
+ GF ++ + +L+ + G G++ +A +L E+ + + T+T+L + G+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVV----TWTALFSGYTTSGRHR 194
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
+A ++ +MV G+ PD+ ++ + L + + M + ++ T L+
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
+ Y + KA + D M+ K VT++ +I G +E +E+
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDI------------VTWSTMIQGYASNSFPKEGIELFL 302
Query: 318 GMPEIGLSPDAVSYSTVIFGF 338
M + L PD S I GF
Sbjct: 303 QMLQENLKPDQFS----IVGF 319
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 183 YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSE-AFDLFQEM 241
Y SLI+ F N + ++ + G+ T+ PL+ C + + + DL +
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTF-PLVLKACTRASSRKLGIDLHSLV 137
Query: 242 LRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIH 301
++ G + D T L+S Y + + A L DE +PD S VT+ A+
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDE------IPD------RSVVTWTALFS 185
Query: 302 GLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKA-----YKLKVEMDK 356
G R EA+++ + M E+G+ PD+ V+ + +L Y ++EM K
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 357 KSISWLGLWGLYDDIDK-----SVMQGLSHED--TFSNLMSDY 392
S L LY K SV + +D T+S ++ Y
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGY 288
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 173/423 (40%), Gaps = 62/423 (14%)
Query: 61 EEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAY 120
E +L + M E D ++ ++I F G+ +KA ++F M +GF P+ + + A
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 121 CRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDD 180
R I R +++GFE + +ALV + +E A E+ Q+M +K L
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLV--- 275
Query: 181 KTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQE 240
+ S+I + KG + E+ M+ +G P T ++ + + L +
Sbjct: 276 -AWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY 334
Query: 241 MLRRGLSPD-------------------------------NKTYTGLMSAYRLQAQFSKA 269
++R ++ D +++ ++S+Y + KA
Sbjct: 335 VIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKA 394
Query: 270 FHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAV 329
+ D+M+ G PD VT+ +++ L E+ +I + E L D +
Sbjct: 395 VEVYDQMVSVGVKPDV--------VTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL 446
Query: 330 SYSTVIFGFCRIRELGKAYKLKVEMDKKS-ISW---LGLWGLYDDIDKSV-----MQGLS 380
S ++ + + +A+++ + KK +SW + +G + +++ MQ
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 381 HEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYL-------PVDVHYSVFLNVLNKKARI 433
+ L++ A GH A L++ + +F + P+ HYS +++L + R+
Sbjct: 507 LKPDGVTLLAVLSACGH---AGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRL 563
Query: 434 TEA 436
EA
Sbjct: 564 LEA 566
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 150/351 (42%), Gaps = 31/351 (8%)
Query: 1 MKLLRVLFKTFLRNRVPPPDVMIRGFAA---AWTETEKTNWKGL----ADETTYNKLVLA 53
+++ R +F+ R + + MI+G+ A + + E N + +TT +++A
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 54 CCRDGRVEEALGI----LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPS 109
C R + I +R + +D SLI L+ G+ + A VF++
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT-----QKD 373
Query: 110 VA-TYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELL 168
VA ++N ++ +Y + +A+ + ++ G +P++++F +++ +E+ +++
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 169 QEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQ 228
+++ L D+ ++L+ ++ G ++AF + + K D ++ +I +
Sbjct: 434 LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK----DVVSWTVMISAYGSH 489
Query: 229 QTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTG 288
EA F EM + GL PD T ++SA + +M K G
Sbjct: 490 GQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSK-------YG 542
Query: 289 ISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
I Y+ +I L R EA EI++ PE + D + +F C
Sbjct: 543 IEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPE---TSDNAELLSTLFSAC 590
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 109/541 (20%), Positives = 218/541 (40%), Gaps = 56/541 (10%)
Query: 73 SDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFS-PSVATYNAIVLAYCRDKRFREALG 131
SD + SL+ + +VF +++ P T+ ++ AY RE LG
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY--GALGREFLG 126
Query: 132 --ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHL 189
I +++ G+ +++ ++LV + E + ++ EM ++ +A ++ ++I
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVA----SWNTVISC 182
Query: 190 FCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPD 249
F G+ EKA E+ M G P++ + I + L ++ ++ +++G D
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 250 NKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRA 309
+ L+ Y A + +M K S V +N++I G +
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKMPRK------------SLVAWNSMIKGYVAKGDS 290
Query: 310 EEALEILRGMPEIGLSPDAVSYSTVIFGFCRIREL--GK---AYKLKVEMDKKSISWLGL 364
+ +EIL M G P + ++++ R R L GK Y ++ ++ L
Sbjct: 291 KSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSL 350
Query: 365 WGLY-----DDIDKSVMQGLSHE--DTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVD 417
LY ++ ++V + ++++ ++S Y++ G+ KA + ++ P
Sbjct: 351 IDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDV 410
Query: 418 VHYSVFLNVLNKKARITEAKH-HLLWFISHVCLRMPTFIIYDTL--IENCSNNE-----F 469
V ++ L ++ A + + K HL IS L ++ L C N + F
Sbjct: 411 VTFTSVLPACSQLAALEKGKQIHL--SISESRLETDELLLSALLDMYSKCGNEKEAFRIF 468
Query: 470 KSV--------VGLVKGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHC-RCGNV 520
S+ ++ +G G ++A D M + KPDG V L + C G +
Sbjct: 469 NSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDG-VTLLAVLSACGHAGLI 527
Query: 521 HKAYDMYMEM-VHYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLRSCNLNDSELLQV 579
+ + +M YG P + +I+ L R + +IQ T + +++ELL
Sbjct: 528 DEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETS--DNAELLST 585
Query: 580 L 580
L
Sbjct: 586 L 586
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 1/210 (0%)
Query: 74 DENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGIL 133
D ++ I FC+ G D AY EM +G +P V TY ++ A + +R G+
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 134 RCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNK 193
++ +G +PNL +FN +Q + + +A +LL M + + D TY +I F
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 194 GKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY 253
+ A + M KG P+ Y +I LC A+ + ++ +R+ P+ T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 254 TGLMSAYRLQAQFSKAFHLQDEMIHKGFLP 283
L+ + Q +A + E++H+ P
Sbjct: 356 EMLLKGLVKKGQLDQAKSIM-ELVHRRVPP 384
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 25/260 (9%)
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHK-GILPDADT 217
G ++A + M+ G K++ + + + + +E + K GI DA +
Sbjct: 120 GMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVS 179
Query: 218 YGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMI 277
+ I S C L A+ +EM + GL+PD TYT L+SA + L + M+
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMV 239
Query: 278 HKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
KG P+ T +N I L RA +A ++L MP++ + PD+++Y+ VI G
Sbjct: 240 LKGCKPNLTT--------FNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 338 F--CRIREL---------GKAYKLKVEMDKKSISWLGLWGLYD---DIDKSVMQG--LSH 381
F R ++ GK YK +++ + I +L G +D + K M+ +
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 382 EDTFSNLMSDYLAEGHLEKA 401
DT L+ + +G L++A
Sbjct: 352 LDTVEMLLKGLVKKGQLDQA 371
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 17/240 (7%)
Query: 116 IVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQK- 174
I++ Y + ++AL + G + ++ SFNA +Q + E L + K
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKY 171
Query: 175 GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEA 234
G+ +D ++ I FC G ++ A+ EM G+ PD TY LI +L +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 235 FDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQF----SKAFHLQDEMIHKGFLPDFVTGIS 290
L+ M+ +G P+ ++ + ++ QF +A+ D ++ +P +
Sbjct: 232 NGLWNLMVLKGCKPN-------LTTFNVRIQFLVNRRRAWDANDLLL---LMPKL--QVE 279
Query: 291 TSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
+TYN +I G L + A + M G P+ Y T+I C+ AY +
Sbjct: 280 PDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTM 339
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 140/315 (44%), Gaps = 24/315 (7%)
Query: 44 ETTYNKLVLACCRDGR----VEE-ALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVF 98
ET + + + R GR +EE AL +++ E D TY+++I +KA + F
Sbjct: 185 ETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWF 244
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
M TG P TY+AI+ Y + + E L + + G++P+ I+F+ L + F
Sbjct: 245 ERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEA 304
Query: 159 GKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY 218
G + +LQEM + + Y +L+ GK A + EM+ G+ P+ T
Sbjct: 305 GDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTL 364
Query: 219 GPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSA---YRLQAQFSKAFHLQDE 275
L+ + +A L++EM + D Y L++ L+ + + F+ E
Sbjct: 365 TALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKE 424
Query: 276 MIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
+ PD + +Y A+++ +AE+A+E+ M + G+ + + +
Sbjct: 425 SVQ--CRPD--------NFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCT--- 471
Query: 336 FGFCRIRELGKAYKL 350
C ++ LGKA ++
Sbjct: 472 ---CLVQCLGKAKRI 483
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 9/261 (3%)
Query: 100 EMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKG 159
EM+ G TY+ I+ R + +A+ + + G P+ ++++A++ + G
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 160 KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
K+EE L + G D ++ L +F G + + EM + P+ Y
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHK 279
L+ ++ A LF EML GL+P+ KT T L+ Y A L +EM K
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Query: 280 GFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPE-IGLSPDAVSYSTVIFGF 338
+ DF + YN +++ + EEA + M E + PD SY+ ++ +
Sbjct: 391 KWPMDF--------ILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIY 442
Query: 339 CRIRELGKAYKLKVEMDKKSI 359
+ KA +L EM K +
Sbjct: 443 GSGGKAEKAMELFEEMLKAGV 463
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 19/195 (9%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
Y +L+ G+ A +F EM++ G +P+ T A+V Y + + R+AL + +
Sbjct: 329 YNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMK 388
Query: 138 ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDK-TYTSLIHLFCNKGKV 196
+ + + I +N L+ G EEAE L +M + D +YT++++++ + GK
Sbjct: 389 AKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKA 448
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEA---------FDLFQEMLRRGLS 247
EKA E+ EM+ G+ + ++G CL Q L +A FDL ++RG+
Sbjct: 449 EKAMELFEEMLKAGVQVN------VMGCTCLVQCLGKAKRIDDVVYVFDL---SIKRGVK 499
Query: 248 PDNKTYTGLMSAYRL 262
PD++ L+S L
Sbjct: 500 PDDRLCGCLLSVMAL 514
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 135/336 (40%), Gaps = 59/336 (17%)
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAI 299
EM++ G+ DN TY+ +++ + ++KA + M G +PD VTY+AI
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPD--------EVTYSAI 262
Query: 300 IHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSI 359
+ + EE L + G PDA+++S LGK +
Sbjct: 263 LDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSV----------LGKMF----------- 301
Query: 360 SWLGLWGLYDDIDKSVMQGLSHEDT------FSNLMSDYLAEGHLEKAYLLEREINYFDY 413
G G YD I + V+Q + D ++ L+ G A L E+
Sbjct: 302 ---GEAGDYDGI-RYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGL 357
Query: 414 LPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPT-FIIYDTLIENCSNNEFKSV 472
P + + + + K AR A+ L + + P FI+Y+TL+ C++
Sbjct: 358 TPNEKTLTALVKIYGK-ARW--ARDALQLWEEMKAKKWPMDFILYNTLLNMCAD------ 408
Query: 473 VGLVKGFGMRGLMKKAARAHDRMLEG-NYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMV 531
GL ++A R + M E +PD Y ++ + G KA +++ EM+
Sbjct: 409 ---------IGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEML 459
Query: 532 HYGFAPHMFSVLALIEALCCVRRYNKMSWVIQNTLR 567
G ++ L++ L +R + + +V +++
Sbjct: 460 KAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIK 495
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 87/217 (40%), Gaps = 8/217 (3%)
Query: 141 FEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAF 200
F I +N ++ + + EE+ EM + G+ LD+ TY+++I KA
Sbjct: 182 FPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAI 241
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAY 260
E M G++PD TY ++ + E L++ + G PD ++ L +
Sbjct: 242 EWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMF 301
Query: 261 RLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMP 320
+ ++ EM P+ V YN ++ + + A + M
Sbjct: 302 GEAGDYDGIRYVLQEMKSMDVKPNV--------VVYNTLLEAMGRAGKPGLARSLFNEML 353
Query: 321 EIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKK 357
E GL+P+ + + ++ + + R A +L EM K
Sbjct: 354 EAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 30 WTETEKTNWKGLADETTYNKLVLACCRDGRVEEALGILRGMAES-----DENTYTSLIHL 84
W E + W D YN L+ C G EEA + M ES D +YT+++++
Sbjct: 384 WEEMKAKKWP--MDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNI 441
Query: 85 FCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPN 144
+ G+ +KA ++F EM+ G +V +V + KR + + + I+RG +P+
Sbjct: 442 YGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Query: 145 ------LISFNALVQGFCGKGKMEEAEEL---LQEMNQK-----GLALDDKT 182
L+S AL + E+AE++ L+ N+K L +D+KT
Sbjct: 502 DRLCGCLLSVMALCES------SEDAEKVMACLERANKKLVTFVNLIVDEKT 547
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 25/328 (7%)
Query: 24 RGFAAAWTETEKTN----WKGLADETTY-NKLVLACCRDGRVEEALGILRGMAESDENTY 78
RG + A+ E+ + ++GL D T N L+ R+G V+ A + G+ D +++
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 79 TSLIHLFCDQGQCD-KAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLI 137
++I + +C+ +A ++F +M G P+ +++ VL+ C+ E L L+
Sbjct: 257 VAMISGL-SKNECEAEAIRLFCDMYVLGIMPTPYAFSS-VLSACKKIESLEIGEQLHGLV 314
Query: 138 ER-GFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKV 196
+ GF + NALV + G + AE + M+Q+ D TY +LI+ G
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYG 370
Query: 197 EKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
EKA E+ M G+ PD++T L+ + TL L + G + +NK L
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
++ Y A A FL V + V +N ++ LLD + I
Sbjct: 431 LNLYAKCADIETALDY--------FLETEVENV----VLWNVMLVAYGLLDDLRNSFRIF 478
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIREL 344
R M + P+ +Y +++ R+ +L
Sbjct: 479 RQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 5/230 (2%)
Query: 48 NKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFS 107
N LV R G++EE+ D + +L+ F G ++A +VF M G
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEEL 167
+ T+ + V A ++ + + + G++ NAL+ + G + +AE+
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 168 LQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCL 227
E++ K ++ ++ ++I+ + G +A + +M+H + P+ T ++ +
Sbjct: 750 FLEVSTK----NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 805
Query: 228 QQTLSEAFDLFQEMLRR-GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
+ + F+ M GLSP + Y ++ S+A EM
Sbjct: 806 IGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM 855
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/529 (17%), Positives = 191/529 (36%), Gaps = 117/529 (22%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
D TYN L+ + G E+A+ + + M E D NT SL+ G + ++
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 412
Query: 99 AEMIDTGFSPS-------------------------------VATYNAIVLAYCRDKRFR 127
A GF+ + V +N +++AY R
Sbjct: 413 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLR 472
Query: 128 EALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLI 187
+ I R + PN ++ ++++ G +E E++ ++ + L+ + LI
Sbjct: 473 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLI 532
Query: 188 HLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLS 247
++ GK++ A+++ K D ++ +I +A F++ML RG+
Sbjct: 533 DMYAKLGKLDTAWDILIRFAGK----DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 248 PDNKTYTGLMSA----------YRLQAQ-----FSKAFHLQDEM---------IHKGFLP 283
D T +SA ++ AQ FS Q+ + I + +L
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 284 DFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIRE 343
F + ++ +NA++ G EEAL + M G+ + ++ + +
Sbjct: 649 -FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 344 LGK-----------AYKLKVEMDKKSISWLGLWGLYDDIDKSVMQ--------------- 377
+ + Y + E+ IS G D +K ++
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 767
Query: 378 ----GLSHE--DTFSNLMSDYLAEGHL---------EKAYLLEREINYFDYL-------P 415
G E D+F ++ + H+ L+++ I YF+ + P
Sbjct: 768 YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 827
Query: 416 VDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENC 464
HY +++L + ++ AK FI + ++ P +++ TL+ C
Sbjct: 828 KPEHYVCVVDMLTRAGLLSRAKE----FIQEMPIK-PDALVWRTLLSAC 871
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 5/237 (2%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
LA N + L+C RV + IL G + Y +L F + C + E
Sbjct: 112 LAAAGELNDMKLSC----RVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKE 167
Query: 101 MIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGK 160
+ ++ + N I+ A+ ++ + L IL+ + E +P++I++N+++ G
Sbjct: 168 ISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGL 227
Query: 161 MEEAEELLQEMNQK-GLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYG 219
+ E +L M + ++++ TY ++++ + + + EMV GI PD +Y
Sbjct: 228 VNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYT 287
Query: 220 PLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
+I SL + E+ LF EM +R + P Y L+ + F A L DE+
Sbjct: 288 AVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 8/178 (4%)
Query: 48 NKLVLACCRDGRVEEALGILRGMAE----SDENTYTSLIHLFCDQGQCDKAYKVFAEMI- 102
N+++ A ++++ L IL+ M E D TY S++ + G ++ V + M
Sbjct: 181 NRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKE 240
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
D S ++ TYN ++ + RF L I +++ G EP+L+S+ A++ G ++
Sbjct: 241 DCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVK 300
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
E+ L EM Q+ + Y +LI G + A ++ E+ + L D GP
Sbjct: 301 ESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTSSL---DLAGP 355
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 114/295 (38%), Gaps = 13/295 (4%)
Query: 78 YTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILR-CL 136
YT+L+ F G AY + + + ++ + ++ A + + + R L
Sbjct: 73 YTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVL 132
Query: 137 IERGFEP-NLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGK 195
I G EP + + L + F LL+E+++ L +I F +
Sbjct: 133 ILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQ 192
Query: 196 VEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRR-GLSPDNKTYT 254
++K + EM PD TY ++ L ++E + M +S + TY
Sbjct: 193 IDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYN 252
Query: 255 GLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALE 314
+++ R +F + +EM+ G PD ++Y A+I L +E+L
Sbjct: 253 TVLNGMRKACRFDMCLVIYNEMVQCGIEPDL--------LSYTAVIDSLGRSGNVKESLR 304
Query: 315 ILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYD 369
+ M + + P Y +I + + A +L E+ K+ S L L G D
Sbjct: 305 LFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL--KNTSSLDLAGPQD 357
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/467 (19%), Positives = 182/467 (38%), Gaps = 63/467 (13%)
Query: 74 DENTYT--SLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALG 131
D N + +LI+ + G D A VF ++ + + IV Y + F ++L
Sbjct: 178 DSNAFVGAALINAYSVCGSVDSARTVFEGIL----CKDIVVWAGIVSCYVENGYFEDSLK 233
Query: 132 ILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFC 191
+L C+ GF PN +F+ ++ G G + A+ + ++ + LD + L+ L+
Sbjct: 234 LLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYT 293
Query: 192 NKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK 251
G + AF++ EM ++P + +I C +EA DLF M + P+
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVP----WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEF 349
Query: 252 TYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEE 311
T + +++ + L ++ GF D NA+I ++ +
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS--------NALIDVYAKCEKMDT 401
Query: 312 ALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDI 371
A+++ + S + VS++TVI G+ + E GKA+ + E + +S
Sbjct: 402 AVKLFAELS----SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVS----------- 446
Query: 372 DKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKA 431
E TFS+ + + ++ L V VH KK
Sbjct: 447 --------VTEVTFSSALGACASLASMD--------------LGVQVHGLAIKTNNAKKV 484
Query: 432 RITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLVKGFGMRGLMKKAARA 491
++ + + + F +T+ + S L+ G+ GL ++A R
Sbjct: 485 AVSNSLIDMYAKCGDIKFAQSVFNEMETI-------DVASWNALISGYSTHGLGRQALRI 537
Query: 492 HDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEMVH-YGFAP 537
D M + + KP+G + ++ G + + + + M+ +G P
Sbjct: 538 LDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEP 584
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 23/247 (9%)
Query: 44 ETTYNKLVLACCRDGRVEEALGI-LRGMAESDEN-----TYTSLIHLFCDQGQCDKAYKV 97
E T++ + AC ++ LG+ + G+A N SLI ++ G A V
Sbjct: 449 EVTFSSALGACASLASMD--LGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSV 506
Query: 98 FAEM--IDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGF 155
F EM ID VA++NA++ Y R+AL IL + +R +PN ++F ++ G
Sbjct: 507 FNEMETID------VASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560
Query: 156 CGKGKMEEAEELLQEM-NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
G +++ +E + M G+ + YT ++ L G+++KA ++ + ++ P
Sbjct: 561 SNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYE---PS 617
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSP-DNKTYTGLMSAYRLQAQFSKAFHLQ 273
+ ++ + Q A +E+L+ ++P D TY + + Y Q++ ++
Sbjct: 618 VMIWRAMLSASMNQNNEEFARRSAEEILK--INPKDEATYVLVSNMYAGAKQWANVASIR 675
Query: 274 DEMIHKG 280
M G
Sbjct: 676 KSMKEMG 682
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 119/282 (42%), Gaps = 20/282 (7%)
Query: 58 GRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIV 117
G + +A + M ++D ++ +I FC G C++A +F M + P+ T ++I+
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSIL 355
Query: 118 --LAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKG 175
A + E L L +++ GF+ ++ NAL+ + KM+ A +L E++ K
Sbjct: 356 NGCAIGKCSGLGEQLHGL--VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK- 412
Query: 176 LALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAF 235
++ ++ ++I + N G+ KAF M E + + T+ +G+ ++
Sbjct: 413 ---NEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGV 469
Query: 236 DLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVT 295
+ ++ + L+ Y A + +EM + +
Sbjct: 470 QVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM------------ETIDVAS 517
Query: 296 YNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFG 337
+NA+I G +AL IL M + P+ +++ V+ G
Sbjct: 518 WNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSG 559
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 126/603 (20%), Positives = 231/603 (38%), Gaps = 103/603 (17%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
D ++N + C+ G + EA + GM E D ++ ++I + +G +KA V+ M+
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 103 DTGFSPSVATYNAIVLAYCR--------------------DKRFREALGILRCLIERGF- 141
GF PS T A VL+ C DK +L + GF
Sbjct: 131 CDGFLPSRFTL-ASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI 189
Query: 142 ------------EPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHL 189
+PN +S+ A++ G + K+ EA ++ + M +KG+ +D ++++ +
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 249
Query: 190 FCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFD----------LFQ 239
+ + E+ + K I A G G L L +L E + +F
Sbjct: 250 SAPREGCDSLSEIYGNELGKQIHCLALRLG-FGGDLHLNNSLLEIYAKNKDMNGAELIFA 308
Query: 240 EMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIST-------- 291
EM + N G YR K+ M GF P+ VT IS
Sbjct: 309 EMPEVNVVSWNIMIVGFGQEYRSD----KSVEFLTRMRDSGFQPNEVTCISVLGACFRSG 364
Query: 292 ---------------SHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIF 336
S +NA++ G + EEA+ R M L PD + S ++
Sbjct: 365 DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILS 424
Query: 337 GFCRIR--ELGK---AYKLKVEMDKKSISWLGLWGLYDDIDKSVMQGLSHED-------- 383
R+R E GK ++ E+ K S GL +Y + +K + +D
Sbjct: 425 SCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIA 484
Query: 384 TFSNLMSDYLAEGHLEKAYLLEREINYFDYL-PVDVHYSVFLNVLNKKARITEAK--HHL 440
+++++S + KA +L R ++ L P + ++ L+ ++ + + H L
Sbjct: 485 CWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGL 544
Query: 441 L---WFISHVCLRMPTFIIYDTLIENCSNNEFKSVV---------GLVKGFGMRGLMKKA 488
+ ++S + +Y E S +F V ++ G+G G +A
Sbjct: 545 VVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEA 604
Query: 489 ARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMY--MEMVHYGFAPHMFSVLALI 546
+ +M+ KPDG + ++ G V ++ M+ +H G P + + ++
Sbjct: 605 VGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIH-GIEPELDHYICIV 663
Query: 547 EAL 549
+ L
Sbjct: 664 DCL 666
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 43 DETTYNKLVLACCR-----DGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKV 97
+ET++ ++ +C R GR L + G SD T+L ++C G+ D A +
Sbjct: 518 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYV-SDSFVETALTDMYCKCGEIDSARQF 576
Query: 98 FAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCG 157
F D + +N ++ Y + R EA+G+ R +I G +P+ I+F +++
Sbjct: 577 F----DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSH 632
Query: 158 KGKMEEAEELLQEMNQ-KGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
G +E E+L M + G+ + Y ++ G++E A ++ +K +
Sbjct: 633 SGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYK---SSSV 689
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNK-TYTGLMSAYRLQAQFSKAFHLQDE 275
+ L+ S + +S A + ++++R L P + Y L + Y Q+ + LQ
Sbjct: 690 LWEILLSSCRVHGDVSLARRVAEKLMR--LDPQSSAAYVLLSNTYSSLRQWDDSAALQGL 747
Query: 276 M----IHK 279
M +HK
Sbjct: 748 MNKNRVHK 755
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 169/430 (39%), Gaps = 39/430 (9%)
Query: 37 NW----KGLA-DETTYNKLVLACCRDGRVEEALGILRGMAES----DENTYTSLIHLFCD 87
NW KG D TY ++ GR++ + M E D TYTSLIH
Sbjct: 110 NWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSS 169
Query: 88 QGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLIS 147
G D A +++ EM D G P+V +Y A + D R EA + + ++ PN +
Sbjct: 170 SGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHT 229
Query: 148 FNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMV 207
+ L++ GK EEA ++ +M + G+ D LI G+ + M
Sbjct: 230 YTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMK 289
Query: 208 HKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEM-----LRRGLSPD-NKTYTGLMSAYR 261
G++ Y + +L + E+ DL +E+ + S D ++T T ++ +
Sbjct: 290 ENGVVL---RYPIFVEALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTK 346
Query: 262 LQAQ---FSKAFHLQDEMIHKGFLPDFV--TGISTSHVTYNAIIHGLCLLDRAEEALEIL 316
S ++ ++ L + + I +AII C R E A
Sbjct: 347 NSDDSRVISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAF 406
Query: 317 RGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKS-----------ISWLGLW 365
E+G+ +Y +I F R EL K ++ EM K I LG +
Sbjct: 407 DYSLEMGIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLG-F 465
Query: 366 GLYDDIDKSVMQGLSHED----TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPVDVHYS 421
G + V L + ++ LM Y++ G EKA + RE+ + +P Y
Sbjct: 466 GRRPRLAADVFDLLPDDQKGVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYD 525
Query: 422 VFLNVLNKKA 431
V L+ L K +
Sbjct: 526 VLLSGLEKTS 535
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 163/395 (41%), Gaps = 51/395 (12%)
Query: 80 SLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIER 139
+L++++ G+ D+A VF M V T+ ++ Y D AL + R +
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRM----ERRDVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 140 GFEPNLISFNALVQGFCGKG-KMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK 198
G PN ++ +LV CG K+ + + L ++ + D TSLI ++ +V+
Sbjct: 314 GVRPNAVTIASLVS-VCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL 372
Query: 199 AFEM--KAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGL 256
F + A H G + +I + +S+A LF+ M R + P+ T L
Sbjct: 373 CFRVFSGASKYHTG------PWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSL 426
Query: 257 MSAYRLQAQFSKAFHLQDEMIHKGFLP--DFVTGISTSHVTYNAIIHGLCLLDRAEEALE 314
+ AY A +A ++ + GF+ D TG+ +H E A +
Sbjct: 427 LPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGL----------VHVYSKCGTLESAHK 476
Query: 315 ILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMDKKSISWLGLWGLYDDIDKS 374
I G+ E S D V + +I G+ + A ++ +EM + ++
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT-------------- 522
Query: 375 VMQGLSHEDTFSNLMSDYLAEGHLEKAYLLER-EINYFDYLPVDVHYSVFLNVLNKKARI 433
+E TF++ ++ G +E+ L R + ++ L HY+ +++L + R+
Sbjct: 523 -----PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRL 577
Query: 434 TEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNE 468
EA + I+ + PT ++ L+ C +E
Sbjct: 578 DEAYN----LITTIPFE-PTSTVWGALLAACVTHE 607
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 109/254 (42%), Gaps = 11/254 (4%)
Query: 67 LRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRF 126
+R SD TSLI ++ + D ++VF+ P ++AI+ +++
Sbjct: 346 VRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----WSAIIAGCVQNELV 401
Query: 127 REALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSL 186
+ALG+ + + EPN+ + N+L+ + + +A + + + G T L
Sbjct: 402 SDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGL 461
Query: 187 IHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGL 246
+H++ G +E A ++ + K D +G LI + A +F EM+R G+
Sbjct: 462 VHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGV 521
Query: 247 SPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHGLCLL 306
+P+ T+T ++A + L + L + T ++H Y I+ L
Sbjct: 522 TPNEITFTSALNACSHSGLVEEGLTL-----FRFMLEHYKTLARSNH--YTCIVDLLGRA 574
Query: 307 DRAEEALEILRGMP 320
R +EA ++ +P
Sbjct: 575 GRLDEAYNLITTIP 588
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 94/216 (43%), Gaps = 3/216 (1%)
Query: 59 RVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVL 118
RV+ + G ++ ++++I A +F M P++AT N+++
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLP 428
Query: 119 AYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLAL 178
AY R+A+ I L + GF +L + LV + G +E A ++ + +K +
Sbjct: 429 AYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSK 488
Query: 179 DDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLF 238
D + +LI + G A ++ EMV G+ P+ T+ + + + E LF
Sbjct: 489 DVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLF 548
Query: 239 QEMLR--RGLSPDNKTYTGLMSAYRLQAQFSKAFHL 272
+ ML + L+ N YT ++ + +A++L
Sbjct: 549 RFMLEHYKTLARSNH-YTCIVDLLGRAGRLDEAYNL 583
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 138/321 (42%), Gaps = 19/321 (5%)
Query: 37 NWKGLADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYK 96
+W G D+ N L+ G+VE A + M D ++ ++I + G + A
Sbjct: 146 SWFG-RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALM 204
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+F M++ AT +++ K + + + E+ + NALV +
Sbjct: 205 MFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYL 264
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
G+M+EA + M ++ D T+T +I+ + G VE A E+ M +G+ P+A
Sbjct: 265 KCGRMDEARFVFDRMERR----DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAV 320
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
T L+ S+C +A + G + + Y+ ++ L + ++K + ++
Sbjct: 321 TIASLV-SVC-----GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRV--DL 372
Query: 277 IHKGFLPDFVTGISTSHV-TYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVI 335
+ F +G S H ++AII G + +AL + + M + P+ + ++++
Sbjct: 373 CFRVF-----SGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLL 427
Query: 336 FGFCRIRELGKAYKLKVEMDK 356
+ + +L +A + + K
Sbjct: 428 PAYAALADLRQAMNIHCYLTK 448
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 113/548 (20%), Positives = 214/548 (39%), Gaps = 88/548 (16%)
Query: 79 TSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
+SL ++ G D A KVF E+ D + +NA+++ Y ++ + EA+ + + +
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Query: 139 RGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEK 198
+G EP ++ + + G +EE ++ G+ LD+ TSL++ +C G +E
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEY 327
Query: 199 AFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS 258
A + M K D T+ +I Q + +A + Q M L D T LMS
Sbjct: 328 AEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMS 383
Query: 259 AYRLQAQFSKAFHLQDEMIHKGFLPDFVTGIST------------------SHVTYNAII 300
A +Q I F D V + S V + I+
Sbjct: 384 AAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL 443
Query: 301 HGLCLLDRAE-----EALEILRGMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKLKVEMD 355
L AE EAL + GM G+ P+ ++++ +I R ++ +A + ++M
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Query: 356 KKSISWLGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKAYLLEREINYFDYLP 415
I + + +++ +M+ + G E+A L R++ P
Sbjct: 504 SSGI-------------------IPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRP 544
Query: 416 VDVHYSVFLNVLNKKA--RITEAKH-HLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSV 472
+V L+ A I H +++ + H L + D + N+ + V
Sbjct: 545 NAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKV 604
Query: 473 VG------------LVKGFGMRGLMKKAARAHDRMLEG-NYKPDGAVYNLLIFDHCRCGN 519
G ++ + + G +K+A + R LEG KPD ++ G+
Sbjct: 605 FGSKLYSELPLSNAMISAYALYGNLKEAIALY-RSLEGVGLKPDNITITNVLSACNHAGD 663
Query: 520 VHKAYDMYMEMV----------HYGFAPHMFS-------VLALIEALCCVRRYNKMSWVI 562
+++A +++ ++V HYG + + L LIE + + + +I
Sbjct: 664 INQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM----PFKPDARMI 719
Query: 563 QNTLRSCN 570
Q+ + SCN
Sbjct: 720 QSLVASCN 727
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 163/399 (40%), Gaps = 42/399 (10%)
Query: 57 DGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAI 116
+G+ A+ I+ GM E D TSL++ +C G + A VF M F V T+N I
Sbjct: 292 EGKQSHAIAIVNGM-ELDNILGTSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLI 346
Query: 117 VLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGL 176
+ Y + +A+ + + + + + ++ L+ ++ +E+ +
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF 406
Query: 177 ALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFD 236
D ++++ ++ G + A ++ V K ++ + L+ + EA
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLI----LWNTLLAAYAESGLSGEALR 462
Query: 237 LFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTY 296
LF M G+ P+ T+ ++ + Q +A + +M G +P+ ++ +
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLIS--------W 514
Query: 297 NAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR---------------I 341
+++G+ +EEA+ LR M E GL P+A S TV C I
Sbjct: 515 TTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI-TVALSACAHLASLHIGRTIHGYII 573
Query: 342 RELGKAYKLKVEMDKKSISWLGLWGLYDDIDKS---VMQGLSHEDTFSNLM-SDYLAEGH 397
R L + + +E S + ++ DI+K+ L E SN M S Y G+
Sbjct: 574 RNLQHSSLVSIE-----TSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGN 628
Query: 398 LEKAYLLEREINYFDYLPVDVHYSVFLNVLNKKARITEA 436
L++A L R + P ++ + L+ N I +A
Sbjct: 629 LKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQA 667
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 121/294 (41%), Gaps = 25/294 (8%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGM----AESDENTYTSLIHLFCDQGQCDKAYKVF 98
D +N L+ A G EAL + GM + T+ +I GQ D+A +F
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 99 AEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGK 158
+M +G P++ ++ ++ ++ EA+ LR + E G PN S +
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 159 GKMEEAEE----LLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
+ +++ + L TSL+ ++ G + KA ++ ++ LP
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLV---SIETSLVDMYAKCGDINKAEKVFGSKLYSE-LPL 615
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
++ +I + L L EA L++ + GL PDN T T ++SA ++A +
Sbjct: 616 SNA---MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFT 672
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDA 328
+++ K + + Y ++ L E+AL ++ MP PDA
Sbjct: 673 DIVSKRSMKPCLE-------HYGLMVDLLASAGETEKALRLIEEMP---FKPDA 716
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 9/204 (4%)
Query: 79 TSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIE 138
TSL+ ++ G +KA KVF + + S NA++ AY +EA+ + R L
Sbjct: 586 TSLVDMYAKCGDINKAEKVFGSKLYSELPLS----NAMISAYALYGNLKEAIALYRSLEG 641
Query: 139 RGFEPNLISFNALVQGFCGKGKMEEAEELLQEM-NQKGLALDDKTYTSLIHLFCNKGKVE 197
G +P+ I+ ++ G + +A E+ ++ +++ + + Y ++ L + G+ E
Sbjct: 642 VGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETE 701
Query: 198 KAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLM 257
KA + EM K PDA L+ S C +Q +E D L ++ Y +
Sbjct: 702 KALRLIEEMPFK---PDARMIQSLVAS-CNKQRKTELVDYLSRKLLESEPENSGNYVTIS 757
Query: 258 SAYRLQAQFSKAFHLQDEMIHKGF 281
+AY ++ + + +++ M KG
Sbjct: 758 NAYAVEGSWDEVVKMREMMKAKGL 781
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 120/299 (40%), Gaps = 44/299 (14%)
Query: 41 LADETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAE 100
+ + ++ +V + GR EEAL + R + + ++T+LI F G+ +A+ VF E
Sbjct: 168 VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTE 227
Query: 101 M------------------------------------IDTGFSPSVATYNAIVLAYCRDK 124
M I GF V NA++ Y +
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 287
Query: 125 RFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYT 184
A I + R +++S+ +L+ G G+ E+A L +M G+ ++ T+
Sbjct: 288 DVIAAKDIFSRMRHR----DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFV 343
Query: 185 SLIHLFCNKGKVEKAFEMKAEMVHK-GILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLR 243
LI+ + G VEK E+ M GI P Y L+ L L EA +L M
Sbjct: 344 GLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM-- 401
Query: 244 RGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHVTYNAIIHG 302
PD T+ L+SA + Q + + D ++ L D T I S++ +A + G
Sbjct: 402 -PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWG 459
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 21/247 (8%)
Query: 53 ACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFSPSVAT 112
A C D V A I M D ++TSLI GQ +KA ++ +M+ G P+ T
Sbjct: 284 AKCSD--VIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 113 YNAIVLAYCRDKRFREALGILRCLI-ERGFEPNLISFNALVQGFCGKGKMEEAEELLQEM 171
+ ++ A + + + + + G P+L + L+ G ++EAE L+ M
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM 401
Query: 172 NQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTY---GPLIGSLCLQ 228
D+ T+ +L+ +G+ + + +V L D TY + S L
Sbjct: 402 P---FPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLW 458
Query: 229 QTLSEAFDLFQEMLRRGLSPDNKT----------YTGLMSAYRLQAQFSKAFHLQDEM-I 277
+SEA EM R P + + Y G S + F L++EM I
Sbjct: 459 GKVSEARRKLGEMEVRK-DPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRI 517
Query: 278 HKGFLPD 284
G++PD
Sbjct: 518 RNGYVPD 524
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 190/474 (40%), Gaps = 65/474 (13%)
Query: 94 AYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQ 153
A V +I GF P N ++ YC+ A R L + EP+ I+ +V
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYA----RQLFDEISEPDKIARTTMVS 88
Query: 154 GFCGKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILP 213
G+C G + A + ++ D Y ++I F + A + +M H+G P
Sbjct: 89 GYCASGDITLARGVFEK--APVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKP 146
Query: 214 DADTYGPLIGSLCL-QQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFH- 271
D T+ ++ L L + L+ G L+S Y A H
Sbjct: 147 DNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHS 206
Query: 272 ---LQDEMIHK----------GFLP--------DFVTGISTSH--VTYNAIIHGLCLLDR 308
+ DE++ K G++ + + G+ + V YNA+I G
Sbjct: 207 ARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF 266
Query: 309 AEEALEILRGMPEIGLSPDAVSYSTVIFGFCR--IRELGK---AYKLKVE-----MDKKS 358
+EALE++R M G+ D +Y +VI + +LGK AY L+ E D
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSL 326
Query: 359 ISWLGLWGLYDDIDKSVMQGLSHED--TFSNLMSDYLAEGHLEKAYLLEREINYFDYLPV 416
+S G +D+ +++ + + +D +++ L+S Y++ GH+ +A L+ +E+ + L
Sbjct: 327 VSLYYKCGKFDEA-RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS- 384
Query: 417 DVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENCSNNEFKSVVGLV 476
+ + ++ L + E L S C++ F E C + G +
Sbjct: 385 ---WMIMISGLAENGFGEEG----LKLFS--CMKREGF-------EPCD----YAFSGAI 424
Query: 477 KGFGMRGLMKKAARAHDRMLEGNYKPDGAVYNLLIFDHCRCGNVHKAYDMYMEM 530
K + G + H ++L+ + + N LI + +CG V +A ++ M
Sbjct: 425 KSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 126/301 (41%), Gaps = 22/301 (7%)
Query: 48 NKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFS 107
N LV + G+ +EA I M D ++ +L+ + G +A +F EM +
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK--- 380
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEEL 167
++ ++ ++ + E L + C+ GFEP +F+ ++ G ++
Sbjct: 381 -NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 168 LQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCL 227
++ + G +LI ++ G VE+A ++ M D+ ++ LI +L
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP----CLDSVSWNALIAALGQ 495
Query: 228 QQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPDFVT 287
+EA D+++EML++G+ PD T +++A + D M + V
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM-------ETVY 548
Query: 288 GISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRIR---EL 344
I Y +I LC + +A ++ +P P A + ++ G CR+ EL
Sbjct: 549 RIPPGADHYARLIDLLCRSGKFSDAESVIESLP---FKPTAEIWEALLSG-CRVHGNMEL 604
Query: 345 G 345
G
Sbjct: 605 G 605
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 113/284 (39%), Gaps = 57/284 (20%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
D ++N L+ G + EA I + M E + ++ +I + G ++ K+F+ M
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 103 DTGFSPSVATYN------AIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
GF P ++ A++ AYC +++ L++ GF+ +L + NAL+ +
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ------LLKIGFDSSLSAGNALITMYA 463
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD-- 214
G +EEA ++ + M LD ++ +LI G +A ++ EM+ KGI PD
Sbjct: 464 KCGVVEEARQVFRTMP----CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
Query: 215 ----------------------------------ADTYGPLIGSLCLQQTLSEAFDLFQE 240
AD Y LI LC S+A + +
Sbjct: 520 TLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIES 579
Query: 241 MLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD 284
+ P + + L+S R+ D++ G +P+
Sbjct: 580 L---PFKPTAEIWEALLSGCRVHGNMELGIIAADKLF--GLIPE 618
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 137/327 (41%), Gaps = 47/327 (14%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
D ++N +V R R+ +AL + M E +YT+LI + Q +A ++F EM
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 103 DTGFSPSVATYNAIVLAYCR------DKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
+ G + T A V++ C D R ++L I L R F +S N L+ +C
Sbjct: 166 NLGIMLNEVTL-ATVISACSHLGGIWDCRMLQSLAIKLKLEGRVF----VSTN-LLHMYC 219
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDAD 216
+++A +L EM ++ L T+ +++ + G +E+A E+ ++ K I+
Sbjct: 220 LCLCLKDARKLFDEMPERNLV----TWNVMLNGYSKAGLIEQAEELFDQITEKDIV---- 271
Query: 217 TYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEM 276
++G +I + L EA + EMLR G+ P L+SA SK L +
Sbjct: 272 SWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTI 331
Query: 277 IHKGF-----------------------LPDFVTGISTSHVTYNAIIHGLCLLDRAEEAL 313
+ +GF L F + + NA+I G E+A
Sbjct: 332 VKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAR 391
Query: 314 EILRGMPEIGLSPDAVSYSTVIFGFCR 340
E+ + D S++ +I G+ +
Sbjct: 392 EVFDQTHD----KDIFSWNAMISGYAQ 414
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 181/474 (38%), Gaps = 120/474 (25%)
Query: 92 DKAYKVFAEMIDTGFSPSVATYNAIVLAYCRDKRFREAL-------------------GI 132
D+A +VF ++ SP V+ Y ++ Y R R +AL G
Sbjct: 52 DEAREVFNQVP----SPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGC 107
Query: 133 LRC--------LIERGFEPNLISFNALVQGFCGKGKMEEAEELLQEMNQKGLALDDKTYT 184
+ C L + E +++S+ A+V G GK+++AE L +M K D +
Sbjct: 108 VECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK----DTAAWN 163
Query: 185 SLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRR 244
S++H + GKV+ A ++ +M K ++ ++ +I L + EA DLF+ MLR
Sbjct: 164 SMVHGYLQFGKVDDALKLFKQMPGKNVI----SWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 245 GLSPDNKTYTGLMSAYRLQAQFSKAFHLQDEMIHKGFLPD-------------------- 284
+ ++ +T +++A F + +I GFL +
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDS 279
Query: 285 ---FVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCRI 341
F + + A++ G L + E+AL I GM + P+ ++++ + +
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 342 REL-------GKAYKLKVEMD----------------------------KKSI-SW---- 361
L G A KL +E D KKSI SW
Sbjct: 340 GTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII 399
Query: 362 -------LGLWGLYDDIDKSVMQGLSHEDTFSNLMSDYLAEGHLEKA----YLLEREINY 410
G W + E TF+ L+S G LEK Y + IN+
Sbjct: 400 VGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH 459
Query: 411 FDYLPVDVHYSVFLNVLNKKARITEAKHHLLWFISHVCLRMPTFIIYDTLIENC 464
D HY+ +++L + ++ EA+ I + ++ P +++ L+ C
Sbjct: 460 IDRKI--QHYTCMVDILGRCGKLKEAEE----LIERMVVK-PNEMVWLALLSAC 506
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 136/333 (40%), Gaps = 39/333 (11%)
Query: 45 TTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDT 104
++ +V C R G+V++A + M D + S++H + G+ D A K+F +M
Sbjct: 129 VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMP-- 186
Query: 105 GFSPSVATYNAIVLAYCRDKRFREAL----GILRCLIERGFEPNLISFNALVQGFCGKGK 160
+V ++ ++ +++R EAL +LRC I+ P F ++
Sbjct: 187 --GKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRP----FTCVITACANAPA 240
Query: 161 MEEAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGP 220
++ + + G ++ SLI + N ++ + ++ E VH+ + +
Sbjct: 241 FHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVA----VWTA 296
Query: 221 LIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTY-TGLMSAYRLQA-QFSKAFH------- 271
L+ L + +A +F MLR + P+ T+ +GL S L + K H
Sbjct: 297 LLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLG 356
Query: 272 ------LQDEMI----HKGFLPD----FVTGISTSHVTYNAIIHGLCLLDRAEEALEILR 317
+ + ++ G + D F+ S V++N+II G R + A I
Sbjct: 357 LETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 318 GMPEIGLSPDAVSYSTVIFGFCRIRELGKAYKL 350
M + PD ++++ ++ L K KL
Sbjct: 417 QMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL 449
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 128/299 (42%), Gaps = 24/299 (8%)
Query: 41 LADETTYNKLVLACCRDGRVE---EALGILRGMA-ESDENTYTSLIHLFCDQGQCDKAYK 96
L +++T+ + +C G ++ E G+ + E+D SL+ ++ D G + A
Sbjct: 323 LPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVS 382
Query: 97 VFAEMIDTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFC 156
VF ++ F S+ ++N+I++ + R + A I +I EP+ I+F L+
Sbjct: 383 VFIKI----FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACS 438
Query: 157 GKGKMEEAEELLQEMNQKGLALDDKT--YTSLIHLFCNKGKVEKAFEMKAEMVHKGILPD 214
G +E+ +L M+ +D K YT ++ + GK+++A E+ MV K P+
Sbjct: 439 HCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVK---PN 495
Query: 215 ADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQD 274
+ L+ S C + + + + S + Y L + Y ++S L+
Sbjct: 496 EMVWLALL-SACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRV 554
Query: 275 EMIHKGFLPDFVTGISTSHVTYNAIIHGLCLLD-----RAEEALEILR-GMPEIGLSPD 327
+M G + +S V H D R E LE LR + E+G +PD
Sbjct: 555 KMKKNGIMKK----PGSSWVVIRGKKHEFFSGDQPHCSRIYEKLEFLREKLKELGYAPD 609
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 133/303 (43%), Gaps = 23/303 (7%)
Query: 43 DETTYNKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMI 102
D+ + +V A R ++ A + M+E +E T LI+ + G ++A +F +M
Sbjct: 934 DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMP 993
Query: 103 DTGFSPSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKME 162
+ ++ ++ Y ++KR+REA+ + ++E G P+ ++ + ++ G +E
Sbjct: 994 ----VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE 1049
Query: 163 EAEELLQEMNQKGLALDDKTYTSLIHLFCNKGKVEKAFEMKAEMVHKGILPDADTYGPLI 222
+E+ Q G LD ++L+ ++ G +E+A + + K + + +I
Sbjct: 1050 IGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF----CWNSII 1105
Query: 223 GSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMSAYRLQAQFSKAFHLQDE--MIHKG 280
L EA +F +M + P+ T+ + +A L DE I++
Sbjct: 1106 EGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG-------LVDEGRRIYRS 1158
Query: 281 FLPDFVTGISTSHVTYNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFCR 340
+ D+ + H Y ++H EALE++ M P+AV + ++ G CR
Sbjct: 1159 MIDDYSIVSNVEH--YGGMVHLFSKAGLIYEALELIGNME---FEPNAVIWGALLDG-CR 1212
Query: 341 IRE 343
I +
Sbjct: 1213 IHK 1215
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 139/344 (40%), Gaps = 61/344 (17%)
Query: 48 NKLVLACCRDGRVEEALGILRGMAESDENTYTSLIHLFCDQGQCDKAYKVFAEMIDTGFS 107
N+ + AC R++ A+ + M E + Y +L F ++ +++ M+ S
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868
Query: 108 PSVATYNAIVLAYCRDKRFREALGILRCLIERGFEPNLISFNALVQGFCGKGKMEEAEEL 167
PS TY+++V A RF E+L GF + + L+ + G++ EA ++
Sbjct: 869 PSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQT--TLIDFYSATGRIREARKV 926
Query: 168 LQEMNQKG--------------LALD-------------DKTYTSLIHLFCNKGKVEKAF 200
EM ++ L +D + T LI+ + G +E+A
Sbjct: 927 FDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAE 986
Query: 201 EMKAEMVHKGILPDADTYGPLIGSLCLQQTLSEAFDLFQEMLRRGLSPDNKTYTGLMS-- 258
+ +M K I+ ++ +I + EA +F +M+ G+ PD T + ++S
Sbjct: 987 SLFNQMPVKDII----SWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISAC 1042
Query: 259 AYRLQAQFSKAFHLQDEMIHKGFLPDFVTGISTSHV-----------------------T 295
A+ + K H+ + GF+ D G + +
Sbjct: 1043 AHLGVLEIGKEVHMY--TLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFC 1100
Query: 296 YNAIIHGLCLLDRAEEALEILRGMPEIGLSPDAVSYSTVIFGFC 339
+N+II GL A+EAL++ M + P+AV++ +V F C
Sbjct: 1101 WNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSV-FTAC 1143