Miyakogusa Predicted Gene

Lj3g3v3085560.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3085560.1 Non Chatacterized Hit- tr|I1LTH7|I1LTH7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,88.65,0,YEAST73DUF,Vacuolar fusion protein MON1; Mon1,Vacuolar
fusion protein MON1; seg,NULL; SUBFAMILY NOT ,CUFF.45255.1
         (325 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G28390.1 | Symbols:  | SAND family protein | chr2:12139836-12...   468   e-132

>AT2G28390.1 | Symbols:  | SAND family protein |
           chr2:12139836-12143375 REVERSE LENGTH=607
          Length = 607

 Score =  468 bits (1203), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 224/327 (68%), Positives = 259/327 (79%), Gaps = 9/327 (2%)

Query: 1   MTPLLGGTDVVFSSLIHSFGWNPATFLHAYTCLPLAYATRQAAGAILQDIADSGVLFAIL 60
           MTPLLGGTD VFSSL+HSF WNPATFLHAYTCLPL YA RQA G ILQ++  SGVLF++L
Sbjct: 288 MTPLLGGTDAVFSSLVHSFSWNPATFLHAYTCLPLPYALRQATGTILQEVCASGVLFSLL 347

Query: 61  MCRNKVISLVGAQKASLHPDDLLLLANFVMXXXXXXXXXXXXPVCLPRYNPSAFLYAYIH 120
           MCR+KV+SL GAQKASLHPDDLLLL+NFVM            P+CLPRYN  AFL+AY+H
Sbjct: 348 MCRHKVVSLAGAQKASLHPDDLLLLSNFVMSSESFRTSESFSPICLPRYNAQAFLHAYVH 407

Query: 121 YFDADTYLMLLTTSSDAFYHLKDCRIRVEMVLLKSNVLSEVQRSLLDGGMHVEDLPAAPN 180
           +FD DTY++LLTT SDAF+HLKDCR+R+E VLLKSN+LS VQRS+ +GGM VED+P    
Sbjct: 408 FFDDDTYVILLTTRSDAFHHLKDCRVRLEAVLLKSNILSVVQRSIAEGGMRVEDVPIDRR 467

Query: 181 SGSSHLGQHTLPSESPQRFNEPNHAI--CGPAGLWHFIYRSIYLDQYVSSEFPSSINTLG 238
             SS   Q     +SP     P+ ++   GP GLWHF+YRSIYLDQY+SSEF   + +  
Sbjct: 468 RRSSTTNQE---QDSPG----PDISVGTGGPFGLWHFMYRSIYLDQYISSEFSPPVTSHR 520

Query: 239 QQKRLYRAYQKLFASMHDKGIRPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAI 298
           QQK LYRAYQKL+ASMH KG+ PHKTQ+RRDENY LLCWVT DFELYAAFDPLADKA+AI
Sbjct: 521 QQKSLYRAYQKLYASMHVKGLGPHKTQYRRDENYTLLCWVTPDFELYAAFDPLADKAMAI 580

Query: 299 KTCNHVCQWIKDVENEIFLLGASPFSW 325
           K CN VCQ +KDVENE+FL GASPFSW
Sbjct: 581 KICNQVCQRVKDVENEVFLQGASPFSW 607