Miyakogusa Predicted Gene

Lj3g3v3085520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3085520.1 Non Chatacterized Hit- tr|I1NI22|I1NI22_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52725
PE,52.87,4e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF588,Uncharacterised protein family UPF0497, tran,CUFF.45246.1
         (143 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G28370.1 | Symbols:  | Uncharacterised protein family (UPF049...   193   4e-50
AT2G37200.1 | Symbols:  | Uncharacterised protein family (UPF049...   155   1e-38
AT3G53850.1 | Symbols:  | Uncharacterised protein family (UPF049...   115   1e-26
AT3G23200.1 | Symbols:  | Uncharacterised protein family (UPF049...   115   1e-26
AT5G02060.1 | Symbols:  | Uncharacterised protein family (UPF049...   107   4e-24
AT3G50810.1 | Symbols:  | Uncharacterised protein family (UPF049...    72   1e-13
AT4G37235.1 | Symbols:  | Uncharacterised protein family (UPF049...    65   1e-11
AT1G49405.1 | Symbols:  | Uncharacterised protein family (UPF049...    64   5e-11

>AT2G28370.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:12132092-12133447 FORWARD LENGTH=179
          Length = 179

 Score =  193 bits (490), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 105/143 (73%), Positives = 119/143 (83%), Gaps = 4/143 (2%)

Query: 1   MNVSHASVHPVDAVPTTEAGGADQNANVPRVRMKDIQGMPGTVGGLALRVSQFVFAAAAL 60
           MNVSHASVHPV+  P      A +  N PRVRM D++GMPGT+ GLALR  QF+FAAAAL
Sbjct: 1   MNVSHASVHPVEDPP----AAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAAL 56

Query: 61  SIMASTNDFPSVTAFCYLVAAAGLQALWSFILAIVDVYAILVRRSLQNYRVLGLFTIGDG 120
            +MAST+DFPSVTAFCYLVAA GLQ+LWS  LA+VDVYAI+V+RSLQN R++ LF IGDG
Sbjct: 57  CVMASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDG 116

Query: 121 VTSTLVFAAACASAGITVLIDND 143
           VTSTL FAAACASAGITVLIDND
Sbjct: 117 VTSTLTFAAACASAGITVLIDND 139


>AT2G37200.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:15622098-15623047 REVERSE LENGTH=180
          Length = 180

 Score =  155 bits (391), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/142 (62%), Positives = 107/142 (75%), Gaps = 3/142 (2%)

Query: 1   MNVSHASVHPVDAVPTTEAGGADQNANVPRVRMKDIQGMPGTVGGLALRVSQFVFAAAAL 60
           MNVS  ++HPVDA+P     GA      P VRMKD+QGMPGT GGL LR+SQFV A  ++
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAIDR---PPVRMKDVQGMPGTTGGLILRLSQFVPALISV 58

Query: 61  SIMASTNDFPSVTAFCYLVAAAGLQALWSFILAIVDVYAILVRRSLQNYRVLGLFTIGDG 120
           S+M +T+DF S TAFC LV A  LQ+LWS  L I+D YA+LVRRSL+N+ V+  FTIGDG
Sbjct: 59  SVMVTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDG 118

Query: 121 VTSTLVFAAACASAGITVLIDN 142
           VTSTL FAAA ASAGITVLI++
Sbjct: 119 VTSTLTFAAASASAGITVLIND 140


>AT3G53850.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr3:19948262-19948994 REVERSE LENGTH=154
          Length = 154

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 77/111 (69%)

Query: 33  MKDIQGMPGTVGGLALRVSQFVFAAAALSIMASTNDFPSVTAFCYLVAAAGLQALWSFIL 92
           MK + G PGTV GL LR+ Q   AAA++ +M S  +F   TAFCYL+A+ GLQ LWSF L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 93  AIVDVYAILVRRSLQNYRVLGLFTIGDGVTSTLVFAAACASAGITVLIDND 143
           A +DVYA+  ++ LQN  ++ LF +GD VT+ L  AAAC+SAG+ VL + D
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKD 111


>AT3G23200.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr3:8281659-8282603 FORWARD LENGTH=152
          Length = 152

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 80/111 (72%)

Query: 33  MKDIQGMPGTVGGLALRVSQFVFAAAALSIMASTNDFPSVTAFCYLVAAAGLQALWSFIL 92
           M DI G PGT+ GL LR+SQ VFAA ++S M ++  F S TAFCYL+AA GLQ +WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 93  AIVDVYAILVRRSLQNYRVLGLFTIGDGVTSTLVFAAACASAGITVLIDND 143
           AI+D +A++ +++L +  ++ LF +GD VTSTL  A A +SAGITVL   D
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGD 111


>AT5G02060.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:404908-405774 FORWARD LENGTH=152
          Length = 152

 Score =  107 bits (266), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 79/111 (71%)

Query: 33  MKDIQGMPGTVGGLALRVSQFVFAAAALSIMASTNDFPSVTAFCYLVAAAGLQALWSFIL 92
           MK + G PGT+ GL LR+ Q   AAA++ +M S+ DF + TAFC+LVA+ GLQ +WSF L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 93  AIVDVYAILVRRSLQNYRVLGLFTIGDGVTSTLVFAAACASAGITVLIDND 143
           A +DVYAI  +  L++  +L LFT+GD VT+ L  AAAC+SAG+TVL   D
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKD 111


>AT3G50810.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr3:18889002-18889868 REVERSE LENGTH=154
          Length = 154

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 56/108 (51%)

Query: 33  MKDIQGMPGTVGGLALRVSQFVFAAAALSIMASTNDFPSVTAFCYLVAAAGLQALWSFIL 92
           M+ + G  GT    ALR  Q +F+AA+L  M    DF   T FCYL     +   WS +L
Sbjct: 1   MEHVPGSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILL 60

Query: 93  AIVDVYAILVRRSLQNYRVLGLFTIGDGVTSTLVFAAACASAGITVLI 140
           A+ D Y++LV+   Q  RVL +   GD V S L    ACA A  T L+
Sbjct: 61  ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELL 108


>AT4G37235.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:17518052-17519671 FORWARD LENGTH=152
          Length = 152

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 2/102 (1%)

Query: 41  GTVGGLALRVSQFVFAAAALSIMASTND--FPSVTAFCYLVAAAGLQALWSFILAIVDVY 98
           GT     LR+ Q +F++A+L  M   +D  F + T FCYLV   GL   WS  LA+++ Y
Sbjct: 9   GTSSSFVLRLGQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSVTLALMEAY 68

Query: 99  AILVRRSLQNYRVLGLFTIGDGVTSTLVFAAACASAGITVLI 140
           +ILV++      V+ +   GD V S L    AC++A + VL+
Sbjct: 69  SILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASVAVLL 110


>AT1G49405.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:18284335-18284947 REVERSE LENGTH=152
          Length = 152

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%)

Query: 33  MKDIQGMPGTVGGLALRVSQFVFAAAALSIMASTNDFPSVTAFCYLVAAAGLQALWSFIL 92
           M ++ G  GT   L+LR+ Q V A  +L  M     F   TAFCYLV    L   W+  L
Sbjct: 1   MVEVPGSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTL 60

Query: 93  AIVDVYAILVRRSLQNYRVLGLFTIGD 119
           A+VD+Y +++++  Q  R+L   +IGD
Sbjct: 61  AMVDIYCVILQQPFQKPRILLAISIGD 87