Miyakogusa Predicted Gene
- Lj3g3v3033270.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3033270.1 Non Chatacterized Hit- tr|I3SWI0|I3SWI0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.25,0,ZF_RING_2,Zinc finger, RING-type; ZF_CHY,Zinc finger,
CHY-type; ZF_CTCHY,Zinc finger, CTCHY-type; Ri,CUFF.45179.1
(268 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22920.1 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc fin... 388 e-108
AT5G25560.1 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc fin... 342 1e-94
AT5G25560.3 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc fin... 335 2e-92
AT5G25560.4 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc fin... 331 4e-91
AT5G25560.2 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc fin... 317 4e-87
AT5G18650.1 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc fin... 306 1e-83
AT3G62970.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 274 5e-74
AT1G74770.1 | Symbols: | zinc ion binding | chr1:28089695-28094... 186 2e-47
AT1G18910.1 | Symbols: | zinc ion binding;zinc ion binding | ch... 169 1e-42
AT3G18290.1 | Symbols: EMB2454, BTS | zinc finger protein-relate... 169 2e-42
>AT5G22920.1 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger
protein | chr5:7665143-7667031 FORWARD LENGTH=291
Length = 291
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 177/239 (74%), Positives = 209/239 (87%)
Query: 30 MELGIEDFGCTHYRRKCRIRAPCCDEVFDCRHCHNEAKNSEEIKPLDRHDIPRHEIEKVI 89
ME+G +GC+HYRR+C+IRAPCCDE+FDCRHCHNEAK+S I+ RH++PRHE+ KVI
Sbjct: 18 MEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRHELPRHEVSKVI 77
Query: 90 CSLCDTEQDVQQYCINCGVCMGKYFCATCKFFDDDISKNQYHCDECGICRIGGKDNFFHC 149
CSLC+TEQDVQQ C NCGVCMGKYFC+ CKFFDDD+SK QYHCDECGICR GG++NFFHC
Sbjct: 78 CSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECGICRTGGEENFFHC 137
Query: 150 KRCGCCYTKEMEKGHHCVEKAMHHNCPVCFEYLFDTLKDITVLPCGHTIHLECVKEMEKH 209
KRC CCY+K ME H CVE AMHHNCPVCFEYLFD+ +DITVL CGHT+HLEC K+M H
Sbjct: 138 KRCRCCYSKIMEDKHQCVEGAMHHNCPVCFEYLFDSTRDITVLRCGHTMHLECTKDMGLH 197
Query: 210 HRFTCPVCSKSICDMSSLWKKLDQVVASTPMPETYRNKMIWILCNDCGVNSNVQFHIVA 268
+R+TCPVCSKSICDMS+LWKKLD+ VA+ PMP+ Y NKM+WILCNDCG N+NV+FH++A
Sbjct: 198 NRYTCPVCSKSICDMSNLWKKLDEEVAAYPMPKMYENKMVWILCNDCGSNTNVRFHLIA 256
>AT5G25560.1 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger
protein | chr5:8899486-8901391 FORWARD LENGTH=308
Length = 308
Score = 342 bits (878), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 149/239 (62%), Positives = 195/239 (81%)
Query: 30 MELGIEDFGCTHYRRKCRIRAPCCDEVFDCRHCHNEAKNSEEIKPLDRHDIPRHEIEKVI 89
++ G+ ++GC HYRR+C IRAPCC+E+F C HCH EAKN+ + RHDIPRH++E+VI
Sbjct: 54 LDRGLMEYGCPHYRRRCCIRAPCCNEIFGCHHCHYEAKNNINVDQKQRHDIPRHQVEQVI 113
Query: 90 CSLCDTEQDVQQYCINCGVCMGKYFCATCKFFDDDISKNQYHCDECGICRIGGKDNFFHC 149
C LC TEQ+V Q CI+CGVCMGKYFC CK +DDD SK QYHCD CGICRIGG++NFFHC
Sbjct: 114 CLLCGTEQEVGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCGICRIGGRENFFHC 173
Query: 150 KRCGCCYTKEMEKGHHCVEKAMHHNCPVCFEYLFDTLKDITVLPCGHTIHLECVKEMEKH 209
+CGCCY+ ++ GH CVE AMHH+CP+CFE+LF++ D+TVLPCGHTIH +C++EM H
Sbjct: 174 YKCGCCYSILLKNGHPCVEGAMHHDCPICFEFLFESRNDVTVLPCGHTIHQKCLEEMRDH 233
Query: 210 HRFTCPVCSKSICDMSSLWKKLDQVVASTPMPETYRNKMIWILCNDCGVNSNVQFHIVA 268
+++ CP+CSKS+CDMS +W+K D +A+TPMPE Y+N+M+ ILCNDCG + VQ+H+VA
Sbjct: 234 YQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRMVQILCNDCGKKAEVQYHVVA 292
>AT5G25560.3 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger
protein | chr5:8899486-8901391 FORWARD LENGTH=318
Length = 318
Score = 335 bits (860), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 149/249 (59%), Positives = 195/249 (78%), Gaps = 10/249 (4%)
Query: 30 MELGIEDFGCTHYRRKCRIRAPCCDEVFDCRHCHNEAKNSEEIKPLDRHDIPRHEIEK-- 87
++ G+ ++GC HYRR+C IRAPCC+E+F C HCH EAKN+ + RHDIPRH++E+
Sbjct: 54 LDRGLMEYGCPHYRRRCCIRAPCCNEIFGCHHCHYEAKNNINVDQKQRHDIPRHQVEQLT 113
Query: 88 --------VICSLCDTEQDVQQYCINCGVCMGKYFCATCKFFDDDISKNQYHCDECGICR 139
VIC LC TEQ+V Q CI+CGVCMGKYFC CK +DDD SK QYHCD CGICR
Sbjct: 114 RPLSSSSQVICLLCGTEQEVGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCGICR 173
Query: 140 IGGKDNFFHCKRCGCCYTKEMEKGHHCVEKAMHHNCPVCFEYLFDTLKDITVLPCGHTIH 199
IGG++NFFHC +CGCCY+ ++ GH CVE AMHH+CP+CFE+LF++ D+TVLPCGHTIH
Sbjct: 174 IGGRENFFHCYKCGCCYSILLKNGHPCVEGAMHHDCPICFEFLFESRNDVTVLPCGHTIH 233
Query: 200 LECVKEMEKHHRFTCPVCSKSICDMSSLWKKLDQVVASTPMPETYRNKMIWILCNDCGVN 259
+C++EM H+++ CP+CSKS+CDMS +W+K D +A+TPMPE Y+N+M+ ILCNDCG
Sbjct: 234 QKCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRMVQILCNDCGKK 293
Query: 260 SNVQFHIVA 268
+ VQ+H+VA
Sbjct: 294 AEVQYHVVA 302
>AT5G25560.4 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger
protein | chr5:8899486-8901391 FORWARD LENGTH=303
Length = 303
Score = 331 bits (848), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 146/235 (62%), Positives = 188/235 (80%)
Query: 34 IEDFGCTHYRRKCRIRAPCCDEVFDCRHCHNEAKNSEEIKPLDRHDIPRHEIEKVICSLC 93
+ D G Y R+C IRAPCC+E+F C HCH EAKN+ + RHDIPRH++E+VIC LC
Sbjct: 53 VLDRGLMEYGRRCCIRAPCCNEIFGCHHCHYEAKNNINVDQKQRHDIPRHQVEQVICLLC 112
Query: 94 DTEQDVQQYCINCGVCMGKYFCATCKFFDDDISKNQYHCDECGICRIGGKDNFFHCKRCG 153
TEQ+V Q CI+CGVCMGKYFC CK +DDD SK QYHCD CGICRIGG++NFFHC +CG
Sbjct: 113 GTEQEVGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCGICRIGGRENFFHCYKCG 172
Query: 154 CCYTKEMEKGHHCVEKAMHHNCPVCFEYLFDTLKDITVLPCGHTIHLECVKEMEKHHRFT 213
CCY+ ++ GH CVE AMHH+CP+CFE+LF++ D+TVLPCGHTIH +C++EM H+++
Sbjct: 173 CCYSILLKNGHPCVEGAMHHDCPICFEFLFESRNDVTVLPCGHTIHQKCLEEMRDHYQYA 232
Query: 214 CPVCSKSICDMSSLWKKLDQVVASTPMPETYRNKMIWILCNDCGVNSNVQFHIVA 268
CP+CSKS+CDMS +W+K D +A+TPMPE Y+N+M+ ILCNDCG + VQ+H+VA
Sbjct: 233 CPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRMVQILCNDCGKKAEVQYHVVA 287
>AT5G25560.2 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger
protein | chr5:8899486-8901453 FORWARD LENGTH=328
Length = 328
Score = 317 bits (813), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 181/223 (81%)
Query: 30 MELGIEDFGCTHYRRKCRIRAPCCDEVFDCRHCHNEAKNSEEIKPLDRHDIPRHEIEKVI 89
++ G+ ++GC HYRR+C IRAPCC+E+F C HCH EAKN+ + RHDIPRH++E+VI
Sbjct: 54 LDRGLMEYGCPHYRRRCCIRAPCCNEIFGCHHCHYEAKNNINVDQKQRHDIPRHQVEQVI 113
Query: 90 CSLCDTEQDVQQYCINCGVCMGKYFCATCKFFDDDISKNQYHCDECGICRIGGKDNFFHC 149
C LC TEQ+V Q CI+CGVCMGKYFC CK +DDD SK QYHCD CGICRIGG++NFFHC
Sbjct: 114 CLLCGTEQEVGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCGICRIGGRENFFHC 173
Query: 150 KRCGCCYTKEMEKGHHCVEKAMHHNCPVCFEYLFDTLKDITVLPCGHTIHLECVKEMEKH 209
+CGCCY+ ++ GH CVE AMHH+CP+CFE+LF++ D+TVLPCGHTIH +C++EM H
Sbjct: 174 YKCGCCYSILLKNGHPCVEGAMHHDCPICFEFLFESRNDVTVLPCGHTIHQKCLEEMRDH 233
Query: 210 HRFTCPVCSKSICDMSSLWKKLDQVVASTPMPETYRNKMIWIL 252
+++ CP+CSKS+CDMS +W+K D +A+TPMPE Y+N+M+ L
Sbjct: 234 YQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRMVNSL 276
>AT5G18650.1 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger
protein | chr5:6218260-6220374 FORWARD LENGTH=267
Length = 267
Score = 306 bits (783), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 134/239 (56%), Positives = 179/239 (74%), Gaps = 1/239 (0%)
Query: 30 MELGIEDFGCTHYRRKCRIRAPCCDEVFDCRHCHNEAKNSEEIKPLDRHDIPRHEIEKVI 89
+ G FGC HY+R+C+IRAPCC+EVFDCRHCHNE+ ++ DRHD+ R ++++VI
Sbjct: 9 LHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTSTLR-NIYDRHDLVRQDVKQVI 67
Query: 90 CSLCDTEQDVQQYCINCGVCMGKYFCATCKFFDDDISKNQYHCDECGICRIGGKDNFFHC 149
CS+CDTEQ Q C NCGV MG+YFC+ C F+DDD K Q+HCD+CGICR+GG++NFFHC
Sbjct: 68 CSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDCGICRVGGRENFFHC 127
Query: 150 KRCGCCYTKEMEKGHHCVEKAMHHNCPVCFEYLFDTLKDITVLPCGHTIHLECVKEMEKH 209
K+CG CY + H CVE +M H+CP+C+EYLFD+LKD V+ CGHT+H+EC EM K
Sbjct: 128 KKCGSCYAVGLRNNHRCVENSMRHHCPICYEYLFDSLKDTNVMKCGHTMHVECYNEMIKR 187
Query: 210 HRFTCPVCSKSICDMSSLWKKLDQVVASTPMPETYRNKMIWILCNDCGVNSNVQFHIVA 268
+F CP+CS+S+ DMS W++LD+ + +T MP YR+K +WILCNDC + V FHI+
Sbjct: 188 DKFCCPICSRSVIDMSKTWQRLDEEIEATAMPSDYRDKKVWILCNDCNDTTEVHFHIIG 246
>AT3G62970.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:23270636-23272698 FORWARD
LENGTH=287
Length = 287
Score = 274 bits (700), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 172/238 (72%), Gaps = 2/238 (0%)
Query: 31 ELGIEDFGCTHYRRKCRIRAPCCDEVFDCRHCHNEAKNSEEIKPLDRHDIPRHEIEKVIC 90
+ G FGC HY+R+C+IRAPCC+ +F CRHCHN++ NS P +RHD+ R +++V+C
Sbjct: 27 DFGKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHNDSANSLP-DPKERHDLVRQNVKQVVC 85
Query: 91 SLCDTEQDVQQYCINCGVCMGKYFCATCKFFDDDISKNQYHCDECGICRIGGKDNFFHCK 150
S+C TEQ+V + C NCGV MG+YFC CKFFDDDISK Q+HCD+CGICR+GG+D FFHC+
Sbjct: 86 SICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHCDDCGICRVGGRDKFFHCQ 145
Query: 151 RCGCCYTKEMEKGHHCVEKAMHHNCPVCFEYLFDTLKDITVLPCGHTIHLECVKEMEKHH 210
CG CY + H C+E + ++CPVC+EYLFD++K V+ CGHT+H++C ++M +
Sbjct: 146 NCGACYGMGLRDKHSCIENSTKNSCPVCYEYLFDSVKAAHVMKCGHTMHMDCFEQMINEN 205
Query: 211 RFTCPVCSKSICDMSSLWKKLDQVVASTPMPETYRNKMIWILCNDCGVNSNVQFHIVA 268
++ CP+C+KS+ DMS W LD +++T MP Y+ + + ILCNDC S FHI+
Sbjct: 206 QYRCPICAKSMVDMSPSWHLLDFEISATEMPVEYKFE-VSILCNDCNKGSKAMFHILG 262
>AT1G74770.1 | Symbols: | zinc ion binding | chr1:28089695-28094834
REVERSE LENGTH=1259
Length = 1259
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 136/234 (58%), Gaps = 19/234 (8%)
Query: 37 FGCTHYRRKCRIRAPCCDEVFDCRHCHNEAKNSEEIKPLDRHDIPRHEIEKVICSLCDTE 96
FGC HY+R C++ APCCD++F C CH+E + H + R +I K++C C
Sbjct: 1023 FGCNHYKRNCKLLAPCCDKLFTCIRCHDEEAD---------HSVDRKQITKMMCMKCLLI 1073
Query: 97 QDVQQYCIN--CGVCMGKYFCATCKFFDDDISKNQYHCDECGICRIG---GKDNFFHCKR 151
Q + C N C MGKYFC CK +DD+ + YHC C +CR+G G D +FHC +
Sbjct: 1074 QPIGANCSNTSCKSSMGKYFCKICKLYDDE--RKIYHCPYCNLCRVGKGLGID-YFHCMK 1130
Query: 152 CGCCYTKEMEKGHHCVEKAMHHNCPVCFEYLFDTLKDITVLPCGHTIHLECVKEMEKHHR 211
C C ++ + + H C EK + NCP+C EY+F + + LPCGH +H C +E H
Sbjct: 1131 CNACMSRTLVE-HVCREKCLEDNCPICHEYIFTSSSPVKALPCGHLMHSTCFQEYTCSH- 1188
Query: 212 FTCPVCSKSICDMSSLWKKLDQVVASTPMPETYRNKMIWILCNDCGVNSNVQFH 265
+TCPVCSKS+ DM +K LD ++A MP+ Y NK ILCNDCG N +H
Sbjct: 1189 YTCPVCSKSLGDMQVYFKMLDALLAEEKMPDEYSNKTQVILCNDCGRKGNAPYH 1242
>AT1G18910.1 | Symbols: | zinc ion binding;zinc ion binding |
chr1:6532706-6537993 REVERSE LENGTH=1254
Length = 1254
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 135/233 (57%), Gaps = 17/233 (7%)
Query: 37 FGCTHYRRKCRIRAPCCDEVFDCRHCHNEAKNSEEIKPLDRHDIPRHEIEKVICSLCDTE 96
FGC HY+R C++ APCC++++ C CH+E + H + R +I K++C C
Sbjct: 1018 FGCKHYKRSCKLLAPCCNKLYTCIRCHDEEVD---------HLLDRKQITKMMCMKCMII 1068
Query: 97 QDV--QQYCINCGVCMGKYFCATCKFFDDDISKNQYHCDECGICRIGG--KDNFFHCKRC 152
Q V I+C MGKY+C CK FDDD + YHC C +CR+G ++FHC +C
Sbjct: 1069 QPVGASCSNISCSSSMGKYYCKICKLFDDD--REIYHCPYCNLCRLGKGLSIDYFHCMKC 1126
Query: 153 GCCYTKEMEKGHHCVEKAMHHNCPVCFEYLFDTLKDITVLPCGHTIHLECVKEMEKHHRF 212
C ++ + + H C EK + NCP+C EY+F + + LPCGH +H C +E H +
Sbjct: 1127 NACMSRLIVE-HVCREKCLEDNCPICHEYIFTSNSPVKALPCGHVMHSTCFQEYTCSH-Y 1184
Query: 213 TCPVCSKSICDMSSLWKKLDQVVASTPMPETYRNKMIWILCNDCGVNSNVQFH 265
TCP+CSKS+ DM ++ LD ++A MP+ Y N+ ILCNDCG N +H
Sbjct: 1185 TCPICSKSLGDMQVYFRMLDALLAEQKMPDEYLNQTQVILCNDCGRKGNAPYH 1237
>AT3G18290.1 | Symbols: EMB2454, BTS | zinc finger protein-related |
chr3:6274308-6280174 FORWARD LENGTH=1254
Length = 1254
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 136/237 (57%), Gaps = 20/237 (8%)
Query: 37 FGCTHYRRKCRIRAPCCDEVFDCRHCHNEAKNSEEIKPLDRHDIPRHEIEKVICSLCDTE 96
+GC HY+R C++RA CCD++F CR CH++ + H + R + +++C C
Sbjct: 1004 YGCEHYKRNCKLRAACCDQLFTCRFCHDKVSD---------HSMDRKLVTEMLCMRCLKV 1054
Query: 97 QDVQQYCINC---GVCMGKYFCATCKFFDDDISKNQYHCDECGICRIG---GKDNFFHCK 150
Q V C G M K++C+ CK FDD+ + YHC C +CR+G G D FFHC
Sbjct: 1055 QPVGPICTTPSCDGFPMAKHYCSICKLFDDE--RAVYHCPFCNLCRVGEGLGID-FFHCM 1111
Query: 151 RCGCCYTKEMEKGHHCVEKAMHHNCPVCFEYLFDTLKDITVLPCGHTIHLECVKEMEKHH 210
C CC ++ H C+EK++ NCP+C E+LF + + + LPCGH +H C + H
Sbjct: 1112 TCNCCLGMKL-VNHKCLEKSLETNCPICCEFLFTSSEAVRALPCGHYMHSACFQAYTCSH 1170
Query: 211 RFTCPVCSKSICDMSSLWKKLDQVVASTPMPETYRNKMIWILCNDCGVNSNVQFHIV 267
+TCP+C KS+ DM+ + LD ++A+ +PE Y+N+ ILCNDC +FH +
Sbjct: 1171 -YTCPICGKSLGDMAVYFGMLDALLAAEELPEEYKNRCQDILCNDCERKGTTRFHWL 1226