Miyakogusa Predicted Gene
- Lj3g3v3033250.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3033250.2 tr|Q7XVB7|Q7XVB7_ORYSJ OSJNBa0072D21.7 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0072D21.7
PE,34.96,2e-18,seg,NULL; EGL3 (ENHANCER OF GLABRA3), DNA BINDING /
TRANSCRIPTION FACTOR,NULL; MYC,NULL; HLH, helix-,CUFF.45205.2
(293 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 235 2e-62
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 95 5e-20
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 92 3e-19
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 92 3e-19
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 92 4e-19
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 92 4e-19
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 80 1e-15
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 75 5e-14
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 75 6e-14
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 74 1e-13
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 74 2e-13
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 2e-13
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 2e-13
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 2e-13
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 72 4e-13
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 70 1e-12
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 70 1e-12
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 70 1e-12
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 70 1e-12
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 70 2e-12
AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 6e-12
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 67 1e-11
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 2e-11
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 2e-11
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 63 2e-10
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 4e-10
AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH) DNA-... 62 5e-10
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 61 7e-10
AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH) DNA-... 61 8e-10
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 61 8e-10
AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | ch... 61 1e-09
AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 2e-08
AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 56 2e-08
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 56 2e-08
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 56 2e-08
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 55 4e-08
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 55 7e-08
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 55 7e-08
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 55 7e-08
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348... 55 8e-08
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 53 2e-07
AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 | chr1:247953... 52 3e-07
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 52 4e-07
AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 5e-07
AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 52 5e-07
AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 | chr2:10319646-1032... 52 6e-07
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508... 50 1e-06
AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 1e-06
AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 1e-06
AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 2e-06
AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 2e-06
AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 2e-06
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 50 2e-06
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 50 2e-06
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 49 3e-06
AT2G31215.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 | chr5:1503... 49 4e-06
AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
AT5G56960.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 48 1e-05
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 235 bits (600), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/287 (47%), Positives = 183/287 (63%), Gaps = 18/287 (6%)
Query: 13 LAHVNDFELHSFVEDPNFDQFINMIRGENEAA---AICDFNSDILNG---YYVDNTFHSF 66
L+++ND ELH+F+ DPNFDQFIN+IRG+++ + DF+ L + +N F
Sbjct: 8 LSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPCFIDENQFIPT 67
Query: 67 PANQ-FDQCNSNNSVRVYDPSSTLSSLSCFDEEAKWXXXXXXXXXXXXXXXTTSTMETKI 125
P + FD+ +S + S FD ++ +++T T
Sbjct: 68 PVDDLFDELPDLDS-------NVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSAT--TTN 118
Query: 126 VNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQA 185
+G + KTDRS+TLISERRRRGRMK+KLYALR+LVPNITKMDKASI+GDAV YV +LQ+
Sbjct: 119 NDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQS 178
Query: 186 QAKKLKTEVAGLEASLLVSQNYQATIESPMKVQS-TDHSSSICKRITQMDIFQVDETELY 244
QAKKLK+++AGLEASL + YQ K Q + K+I QMD+ QV+E Y
Sbjct: 179 QAKKLKSDIAGLEASLNSTGGYQEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKGFY 238
Query: 245 VKIVCNKGEGVAASLYKSLESLTGFHVQNSNLNTVS-ECFLLKFSLN 290
V++VCNKGEGVA SLYKSLESLT F VQNSNL++ S + +LL ++L+
Sbjct: 239 VRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLD 285
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 26/173 (15%)
Query: 136 RSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEV- 194
++K L++ERRRR ++ ++LYALR+LVP ITK+D+ASI+GDA++YV +LQ +AK+L+ E+
Sbjct: 312 QAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELE 371
Query: 195 -------------AGLEASLLVSQNYQATIES----PMKVQSTDHSSSICKRI---TQMD 234
G+ + V + + P Q D +S K Q+D
Sbjct: 372 ENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVD 431
Query: 235 IFQVDETELYVKIVCNKGEGVAASLYKSLESLTGFHVQNSN----LNTVSECF 283
+ Q+D E +VK++C G L ++L+SL G V N+N L+ VS F
Sbjct: 432 VAQLDGREFFVKVICEYKPGGFTRLMEALDSL-GLEVTNANTTRYLSLVSNVF 483
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
SK ++SER RR ++ ++L+ALR++VPNITKMDKASII DA+SY+ LQ + KKL+ E+
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 197 LE----ASLLVSQNYQATIESPM---KVQSTDHSSSICK-RITQMDIFQVDETELYVKIV 248
LE +SL S+++ + P+ K++ D SS + ++ + + E + V +
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVT 173
Query: 249 CNKGEGVAASLYKSLESLTGFHVQNSNLNTVS 280
CNK L + ESL + SNL + S
Sbjct: 174 CNKRTDTMVKLCEVFESL-NLKILTSNLTSFS 204
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
SK ++SER RR ++ ++L+ALR++VPNITKMDKASII DA+SY+ LQ + KKL+ E+
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 197 LE----ASLLVSQNYQATIESPM---KVQSTDHSSSICK-RITQMDIFQVDETELYVKIV 248
LE +SL S+++ + P+ K++ D SS + ++ + + E + V +
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVT 173
Query: 249 CNKGEGVAASLYKSLESLTGFHVQNSNLNTVS 280
CNK L + ESL + SNL + S
Sbjct: 174 CNKRTDTMVKLCEVFESL-NLKILTSNLTSFS 204
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
SK ++SER RR ++ ++L+ALR++VPNITKMDKASII DA+SY+ LQ + KKL+ E+
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 197 LE----ASLLVSQNYQATIESPM---KVQSTDHSSSI-CKRITQMDIFQVDETELYVKIV 248
LE +SL S+++ + P+ K++ D SS + ++ + + E + V +
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVT 173
Query: 249 CNKGEGVAASLYKSLESLTGFHVQNSNLNTVS 280
CNK L + ESL + SNL + S
Sbjct: 174 CNKRTDTMVKLCEVFESL-NLKILTSNLTSFS 204
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
SK ++SER RR ++ ++L+ALR++VPNITKMDKASII DA+SY+ LQ + KKL+ E+
Sbjct: 53 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 112
Query: 197 LE----ASLLVSQNYQATIESPM---KVQSTDHSSSICK-RITQMDIFQVDETELYVKIV 248
LE +SL S+++ + P+ K++ D SS + ++ + + E + V +
Sbjct: 113 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVT 172
Query: 249 CNKGEGVAASLYKSLESLTGFHVQNSNLNTVS 280
CNK L + ESL + SNL + S
Sbjct: 173 CNKRTDTMVKLCEVFESL-NLKILTSNLTSFS 203
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
SK ++SER RR ++ ++L+ALR++VPNI+K+DKAS+I D++ Y+ +L Q K L+ E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 197 LEASLLVSQNYQATIESPMKVQSTDHSSSICK---RITQMDIFQVDETELYVKIVCNKGE 253
LE+ +E+PM D+S+ + + +M + + E + V I C+K
Sbjct: 113 LESR-------STLLENPM-----DYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKR 160
Query: 254 GVAASLYKSLESL 266
L K LESL
Sbjct: 161 ETMVQLCKVLESL 173
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 20/150 (13%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
SK ++SER RR ++ ++L+ALR++VPNI+K+DKAS+I D++ Y+ +L Q K L+ E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 197 LEASLLVSQN----YQATIESPMKVQSTDHSSSICKRITQMD----------------IF 236
LE+ + +N Y +D++ K+ QMD +
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVT 172
Query: 237 QVDETELYVKIVCNKGEGVAASLYKSLESL 266
+ E + V I C+K L K LESL
Sbjct: 173 WMGEKTVVVCITCSKKRETMVQLCKVLESL 202
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645505 FORWARD
LENGTH=263
Length = 263
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 20/150 (13%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
SK ++SER RR ++ ++L+ALR++VPNI+K+DKAS+I D++ Y+ +L Q K L+ E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 197 LEASLLVSQN----YQATIESPMKVQSTDHSSSICKRITQMD----------------IF 236
LE+ + +N Y +D++ K+ QMD +
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVT 172
Query: 237 QVDETELYVKIVCNKGEGVAASLYKSLESL 266
+ E + V I C+K L K LESL
Sbjct: 173 WMGEKTVVVCITCSKKRETMVQLCKVLESL 202
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 17/163 (10%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
+K L++ERRRR ++ ++LY LR++VP I+KMD+ASI+GDA+ Y+ +L + L TE
Sbjct: 266 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTE--- 322
Query: 197 LEASLLVSQNYQATIESPMKV-----QSTDHSSSICKRITQMDIFQVDETE---LYVKIV 248
LE++ S + +P + + SSS+ Q +V E + + +
Sbjct: 323 LESTPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMF 382
Query: 249 CNKGEGVAASLYKSLESLTGFHVQNSNLNTVSECFLLKFSLNV 291
C + G+ S ++L++L G VQ + V CF F+L+V
Sbjct: 383 CGRRPGLLLSTMRALDNL-GLDVQQA----VISCF-NGFALDV 419
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 62/94 (65%), Gaps = 6/94 (6%)
Query: 124 KIVNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDL 183
K NG+ P + +ER+RR ++ ++ YALR++VPNI+KMDKAS++GDA+SY+ +L
Sbjct: 385 KPANGREEPLNH----VEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKEL 440
Query: 184 QAQAKKLKTEVAGLEASLLVSQNYQATIESPMKV 217
Q + K ++ E G + SL S++ T+E +V
Sbjct: 441 QEKVKIMEDERVGTDKSL--SESNTITVEESPEV 472
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 31/163 (19%)
Query: 131 RPKTDRSKTL---ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQA 187
RP R++ L +ER+RR ++ ++ YALR++VPNI+KMDKAS++GDAVSY+ +L A+
Sbjct: 423 RPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKL 482
Query: 188 KKLKTEVAGLEASLLVSQNYQATIESPMKVQSTDHSSSICKRITQMDIFQVDETELYVKI 247
K ++ E L S N +++S + VQ++ ++ V+I
Sbjct: 483 KVMEAE----RERLGYSSNPPISLDSDINVQTSGE-------------------DVTVRI 519
Query: 248 VCNKGEGVAASLYKSLESLTGFHVQNSNL----NTVSECFLLK 286
C A+ ++ + E + V NSNL +TV F++K
Sbjct: 520 NCPLESHPASRIFHAFEE-SKVEVINSNLEVSQDTVLHTFVVK 561
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 31/163 (19%)
Query: 131 RPKTDRSKTL---ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQA 187
RP R++ L +ER+RR ++ ++ YALR++VPNI+KMDKAS++GDAVSY+ +L A+
Sbjct: 423 RPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKL 482
Query: 188 KKLKTEVAGLEASLLVSQNYQATIESPMKVQSTDHSSSICKRITQMDIFQVDETELYVKI 247
K ++ E L S N +++S + VQ++ ++ V+I
Sbjct: 483 KVMEAE----RERLGYSSNPPISLDSDINVQTSGE-------------------DVTVRI 519
Query: 248 VCNKGEGVAASLYKSLESLTGFHVQNSNL----NTVSECFLLK 286
C A+ ++ + E + V NSNL +TV F++K
Sbjct: 520 NCPLESHPASRIFHAFEE-SKVEVINSNLEVSQDTVLHTFVVK 561
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 31/163 (19%)
Query: 131 RPKTDRSKTL---ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQA 187
RP R++ L +ER+RR ++ ++ YALR++VPNI+KMDKAS++GDAVSY+ +L A+
Sbjct: 423 RPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKL 482
Query: 188 KKLKTEVAGLEASLLVSQNYQATIESPMKVQSTDHSSSICKRITQMDIFQVDETELYVKI 247
K ++ E L S N +++S + VQ++ ++ V+I
Sbjct: 483 KVMEAE----RERLGYSSNPPISLDSDINVQTSGE-------------------DVTVRI 519
Query: 248 VCNKGEGVAASLYKSLESLTGFHVQNSNL----NTVSECFLLK 286
C A+ ++ + E + V NSNL +TV F++K
Sbjct: 520 NCPLESHPASRIFHAFEE-SKVEVINSNLEVSQDTVLHTFVVK 561
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 95/163 (58%), Gaps = 10/163 (6%)
Query: 124 KIVNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDL 183
K NG+ P + +ER+RR ++ ++ Y+LRA+VPN++KMDKAS++GDA+SY+ +L
Sbjct: 406 KPANGREEPLNH----VEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISEL 461
Query: 184 QAQAKKLKTEVAGLEASLLVSQNYQATIESPMKVQST-DHSSSICKRITQMDI-FQVDET 241
+++ +K +++ L+ + V +S +K + + SS+ + +M++ ++
Sbjct: 462 KSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSV---LIEMEVDVKIIGW 518
Query: 242 ELYVKIVCNKGEGVAASLYKSLESLTGFHVQNSNLNTVSECFL 284
+ ++I C+K A ++L+ L V +++L+ V++ +
Sbjct: 519 DAMIRIQCSKRNHPGAKFMEALKELD-LEVNHASLSVVNDLMI 560
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 52/70 (74%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
SK ++SER RR ++ ++L+ALR++VPNI+K+DKAS+I D++ Y+ +L Q K L+ E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 197 LEASLLVSQN 206
LE+ + +N
Sbjct: 113 LESRSTLLEN 122
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 15/164 (9%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
+K L++ERRRR ++ ++LY LR++VP I+KMD+ASI+GDA+ Y+ +L + L E+
Sbjct: 306 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 365
Query: 197 LEASLL--VSQNYQATIESPM----KVQSTDHSSSICKRITQMDIFQVDETE---LYVKI 247
L S ++ +P +V+ SS+ Q +V E + + +
Sbjct: 366 TPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHM 425
Query: 248 VCNKGEGVAASLYKSLESLTGFHVQNSNLNTVSECFLLKFSLNV 291
C + G+ + K+L++L G VQ + V CF F+L+V
Sbjct: 426 FCGRRPGLLLATMKALDNL-GLDVQQA----VISCF-NGFALDV 463
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 15/164 (9%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
+K L++ERRRR ++ ++LY LR++VP I+KMD+ASI+GDA+ Y+ +L + L E+
Sbjct: 306 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 365
Query: 197 LEASLL--VSQNYQATIESPM----KVQSTDHSSSICKRITQMDIFQVDETE---LYVKI 247
L S ++ +P +V+ SS+ Q +V E + + +
Sbjct: 366 TPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHM 425
Query: 248 VCNKGEGVAASLYKSLESLTGFHVQNSNLNTVSECFLLKFSLNV 291
C + G+ + K+L++L G VQ + V CF F+L+V
Sbjct: 426 FCGRRPGLLLATMKALDNL-GLDVQQA----VISCF-NGFALDV 463
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 15/164 (9%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
+K L++ERRRR ++ ++LY LR++VP I+KMD+ASI+GDA+ Y+ +L + L E+
Sbjct: 306 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 365
Query: 197 LEASLL--VSQNYQATIESPM----KVQSTDHSSSICKRITQMDIFQVDETE---LYVKI 247
L S ++ +P +V+ SS+ Q +V E + + +
Sbjct: 366 TPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHM 425
Query: 248 VCNKGEGVAASLYKSLESLTGFHVQNSNLNTVSECFLLKFSLNV 291
C + G+ + K+L++L G VQ + V CF F+L+V
Sbjct: 426 FCGRRPGLLLATMKALDNL-GLDVQQA----VISCF-NGFALDV 463
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 91/165 (55%), Gaps = 10/165 (6%)
Query: 124 KIVNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDL 183
K NG+ P + +ER+RR ++ ++ Y+LRA+VPN++KMDKAS++GDA+SY+ +L
Sbjct: 405 KPANGREEPLNH----VEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINEL 460
Query: 184 QA---QAKKLKTEVAGLEASLLVSQNYQATIESPMKVQSTDHSSSICKRITQMDI-FQVD 239
++ QA+ K E+ + N S K + + + S I +M+I ++
Sbjct: 461 KSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSI-EMEIDVKII 519
Query: 240 ETELYVKIVCNKGEGVAASLYKSLESLTGFHVQNSNLNTVSECFL 284
++ +++ C K + A ++L+ L V +++L+ V++ +
Sbjct: 520 GWDVMIRVQCGKKDHPGARFMEALKELD-LEVNHASLSVVNDLMI 563
>AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3506463-3508752 FORWARD
LENGTH=441
Length = 441
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 136 RSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVA 195
+SK L SER+RR R+ + +Y LRA+VP ITK++K I DAV Y+ +L + +KL+ E+
Sbjct: 262 KSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELK 321
Query: 196 G---LEASLLVSQNYQATIESPMKVQSTDHSSSICKRITQMDIFQVDETELYVKIV 248
G +E + ++ A + + S+ + + K ++++ + E + +++V
Sbjct: 322 GINEMECKEIAAEEQSAIADPEAERVSSKSNKRVKKNEVKIEVHETGERDFLIRVV 377
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 51/70 (72%), Gaps = 4/70 (5%)
Query: 124 KIVNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDL 183
K NG+ P + +ER+RR ++ ++ YALRA+VPN++KMDKAS++GDA++Y+ +L
Sbjct: 442 KPANGREEPLNH----VEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINEL 497
Query: 184 QAQAKKLKTE 193
+++ K ++E
Sbjct: 498 KSKVVKTESE 507
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:9267599-9269002 FORWARD
LENGTH=467
Length = 467
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 120 TMETKIVNGKSRPKTDRSKTL---ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDA 176
T E K +P R + L +ER+RR ++ ++ YALRA+VPNI+KMDKAS++ DA
Sbjct: 299 TDEQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADA 358
Query: 177 VSYVYDLQAQAKKLKTE 193
++Y+ D+Q + + +TE
Sbjct: 359 ITYITDMQKKIRVYETE 375
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 90/163 (55%), Gaps = 15/163 (9%)
Query: 123 TKIVNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYD 182
TK SR +++ +I+ER+RR ++ ++ AL ALVP + KMDKAS++GDA+ ++
Sbjct: 137 TKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKY 196
Query: 183 LQAQAKKLKTEVA--GLEASLLVSQNYQATIESPMKVQSTDHS-SSICKR-ITQMDIFQV 238
LQ + +L+ + LE+ +LV + S + + + S SS C+ + +D+ ++
Sbjct: 197 LQERVGELEEQKKERRLESMVLVKK-------SKLILDDNNQSFSSSCEDGFSDLDLPEI 249
Query: 239 D----ETELYVKIVCNKGEGVAASLYKSLESLTGFHVQNSNLN 277
+ + ++ +KI+C K +G A + +E L +S LN
Sbjct: 250 EVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLN 292
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=304
Length = 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 91/170 (53%), Gaps = 15/170 (8%)
Query: 123 TKIVNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYD 182
TK +R +++ +++ER+RR ++ ++ AL AL+P + KMDKAS++GDA+ ++
Sbjct: 111 TKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKY 170
Query: 183 LQAQAKK---------LKTEVAGLEASLLVSQNYQATIESPMKVQSTDHSSSICKRITQM 233
LQ K+ +++ V ++SL++ +N+Q + S + +S + ++
Sbjct: 171 LQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPS----SSSSSDGNRNSSSSNLPEI 226
Query: 234 DIFQVDETELYVKIVCNKGEGVAASLYKSLESLTGFHVQNSNLNTVSECF 283
++ +V ++ +KI+C K +G + +E L G + NSN+ F
Sbjct: 227 EV-RVSGKDVLIKILCEKQKGNVIKIMGEIEKL-GLSITNSNVLPFGPTF 274
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=305
Length = 305
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 91/170 (53%), Gaps = 15/170 (8%)
Query: 123 TKIVNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYD 182
TK +R +++ +++ER+RR ++ ++ AL AL+P + KMDKAS++GDA+ ++
Sbjct: 111 TKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKY 170
Query: 183 LQAQAKK---------LKTEVAGLEASLLVSQNYQATIESPMKVQSTDHSSSICKRITQM 233
LQ K+ +++ V ++SL++ +N+Q + S + +S + ++
Sbjct: 171 LQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPS----SSSSSDGNRNSSSSNLPEI 226
Query: 234 DIFQVDETELYVKIVCNKGEGVAASLYKSLESLTGFHVQNSNLNTVSECF 283
++ +V ++ +KI+C K +G + +E L G + NSN+ F
Sbjct: 227 EV-RVSGKDVLIKILCEKQKGNVIKIMGEIEKL-GLSITNSNVLPFGPTF 274
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 19/145 (13%)
Query: 140 LISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG--- 196
+++ER+RR ++ EK AL AL+P + K DK +I+ DA+S + LQ Q + LK E
Sbjct: 121 VLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQ 180
Query: 197 LEASLLVSQNYQATIESP-------MKVQSTDHSSSICKRITQMDIFQVDETELYVKIVC 249
+E+ +LV ++ E P + ++ I +I+Q DI ++I+C
Sbjct: 181 MESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDIL--------IRILC 232
Query: 250 NKGEGVAASLYKSLESLTGFHVQNS 274
K +G ++ ++E+ ++NS
Sbjct: 233 EKSKGCMINILNTIENFQ-LRIENS 256
>AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:11349922-11350694
FORWARD LENGTH=207
Length = 207
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 83/160 (51%), Gaps = 3/160 (1%)
Query: 136 RSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVA 195
+S L +ERRRR ++ +L ALR+ VP +T M KASI+ DA++Y+ +LQ K L
Sbjct: 30 KSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFH 89
Query: 196 GLEASLLVSQNYQATIESPMKVQSTDHSSSICKRITQ--MDIFQVDETELYVKIVCNKGE 253
+E + Q +V+++D + + K + + + ++ E + ++KI+ K +
Sbjct: 90 EMEEAPPEIDEEQTDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFWLKIITEKRD 149
Query: 254 GVAASLYKSLESLTGFHVQNSNLNTVSECFLLKFSLNVSQ 293
G+ + + L GF + + +L T + L+ S+ +
Sbjct: 150 GIFTKFMEVMRFL-GFEIIDISLTTSNGAILISASVQTQE 188
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 129 KSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAK 188
K P+ D S +++ERRRR ++ EK LR++VP +TKMDK SI+GD ++YV L+ +
Sbjct: 355 KRLPREDLSH-VVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVH 413
Query: 189 KLK 191
+L+
Sbjct: 414 ELE 416
>AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:9684858-9686321
FORWARD LENGTH=320
Length = 320
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 127 NGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQ 186
NG R + +++ER+RR ++ E+L AL AL+P + K DKA+++ DA+ ++ LQ +
Sbjct: 121 NGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQER 180
Query: 187 AKKLKTE---VAGLEASLLVSQNYQATIESPMKVQSTDHSS-----------SICKRITQ 232
KKL+ E ++ S+++ + Q ++ S+ S+ SI K+
Sbjct: 181 VKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMP 240
Query: 233 MDIFQVDETELYVKIVCNKGEGVAASLYKSLE 264
M +V + +L +++ C K +G + SLE
Sbjct: 241 MIEARVSDRDLLIRVHCEKNKGCMIKILSSLE 272
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:362230-363639 REVERSE
LENGTH=423
Length = 423
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 44/57 (77%)
Query: 142 SERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAGLE 198
+E++RR ++ + YALRA+VP +++MDKAS++ DAVSY+ L+++ L+TE+ ++
Sbjct: 253 AEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMK 309
>AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 |
chr5:19002719-19004254 FORWARD LENGTH=511
Length = 511
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 132 PKTDRSKTL---ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAK 188
P R K L +ER RR ++ + YALRA+VPN++KMDK S++ DAV Y+ +L+++A+
Sbjct: 334 PAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAE 393
Query: 189 KLKTEVAGLE 198
++ E +E
Sbjct: 394 NVELEKHAIE 403
>AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:3341357-3342877 FORWARD
LENGTH=315
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 37/164 (22%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
SK L++ERRRR R+ ++L LR++VP ITKMD+ SI+GDA+ Y+ +L + KL+
Sbjct: 150 SKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQ----- 204
Query: 197 LEASLLVSQNYQATIESPMKVQSTDHSSSICKRITQMDI------FQVDETEL--YVKIV 248
E ++ S H S++ IT + F+VD+ E+ ++ I
Sbjct: 205 ---------------EDEQELGSNSHLSTL---ITNESMVRNSLKFEVDQREVNTHIDIC 246
Query: 249 CNKGEGVAASLYKSLESLTGFHVQNSNLNTVSECFLLKFSLNVS 292
C G+ S +LE+L G ++ V CF FSL S
Sbjct: 247 CPTKPGLVVSTVSTLETL-GLEIE----QCVISCF-SDFSLQAS 284
>AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238904 FORWARD LENGTH=351
Length = 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 12/156 (7%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAG 196
SK L++ERRRR R+ ++L LR++VP I+KMD+ SI+GDA+ Y+ +L + KL+ E
Sbjct: 177 SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQE 236
Query: 197 LEASLLVSQNYQATIESPMKVQSTDHSSSICKRITQMDIFQVDETELYVKIVCNKGEGVA 256
L S + ++ + + +K + + + + + +I + DE + V I C+ G+
Sbjct: 237 LGNS---NNSHHSKLFGDLK--DLNANEPLVRNSPKFEIDRRDE-DTRVDICCSPKPGLL 290
Query: 257 ASLYKSLESLTGFHVQNSNLNTVSECFLLKFSLNVS 292
S +LE+L G ++ V CF FSL S
Sbjct: 291 LSTVNTLETL-GLEIE----QCVISCF-SDFSLQAS 320
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAK 188
+SERRRR R+ EK+ AL+ L+PN K+DKAS++ +A+ Y+ LQ Q +
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAK 188
+SERRRR R+ EK+ AL+ L+PN K+DKAS++ +A+ Y+ LQ Q +
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKL 190
+SE+RRR R+ EK+ AL++L+PN K DKAS++ +A+ Y+ LQ Q + L
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 40/52 (76%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKT 192
+SE++RR ++ E+ LR+++P+I+K+DK SI+ D + Y+ DLQ + ++L++
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 40/52 (76%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKT 192
+SE++RR ++ E+ LR+++P+I+K+DK SI+ D + Y+ DLQ + ++L++
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 40/52 (76%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKT 192
+SE++RR ++ E+ LR+++P+I+K+DK SI+ D + Y+ DLQ + ++L++
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459
>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
chr5:23483670-23484889 REVERSE LENGTH=297
Length = 297
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 117 TTSTMETKIVNGKSRPKTDRSKTL----ISERRRRGRMKEKLYALRALVPNITKMDKASI 172
T ST +V K R + R + I+ER RR R+ E++ +L+ LVPN K DKAS+
Sbjct: 84 TVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASM 143
Query: 173 IGDAVSYVYDLQAQAKKLKTEVAGLEASL 201
+ + + YV LQ Q K L G S+
Sbjct: 144 LDEIIEYVRFLQLQVKVLSMSRLGGAGSV 172
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 122 ETKIVNGKSRPKTDRSKTLI----SERRRRGRMKEKLYALRALVPNITKMDKASIIGDAV 177
E K GKS T RS+ SER+RR ++ +++ L+ LVPN +K DKAS++ + +
Sbjct: 197 EEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVI 256
Query: 178 SYVYDLQAQ 186
Y+ LQAQ
Sbjct: 257 EYLKQLQAQ 265
>AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 |
chr1:24795326-24796598 FORWARD LENGTH=298
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 126 VNGKSRPK---TDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYD 182
V GK++PK + + ++ + RR R+ E+L L+ LVPN TK+D +++ A+SYV
Sbjct: 190 VTGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKF 249
Query: 183 LQAQAKKLKTE 193
LQ Q K L T+
Sbjct: 250 LQVQVKVLATD 260
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKL 190
+SE++RR ++ EK+ AL+ L+PN K DKAS++ +A+ Y+ LQ Q + L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13303014-13304661 FORWARD
LENGTH=458
Length = 458
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 127 NGKSRPK--TDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQ 184
NG +R + +S+T +ER RR ++ + L+ L+PN TK+D+ASI+G+A+ Y+ +L
Sbjct: 234 NGVTRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELL 293
Query: 185 AQAKKLKTEV 194
++ K V
Sbjct: 294 RTIEEFKMLV 303
>AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238635 FORWARD LENGTH=290
Length = 290
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 43/57 (75%)
Query: 137 SKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTE 193
SK L++ERRRR R+ ++L LR++VP I+KMD+ SI+GDA+ Y+ +L + KL+ E
Sbjct: 177 SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDE 233
>AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 |
chr2:10319646-10322177 REVERSE LENGTH=350
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAGLEAS 200
I+ER RR R+ E++ AL+ LVPN K DKAS++ + + YV LQ Q K L G AS
Sbjct: 151 IAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAS 210
Query: 201 L 201
+
Sbjct: 211 V 211
>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
chr4:15079489-15081606 REVERSE LENGTH=310
Length = 310
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAGLEAS 200
I+ER RR R+ E++ +L+ LVPN K DKAS++ + + YV LQ Q K L G AS
Sbjct: 143 IAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAS 202
>AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1885146-1886564 REVERSE
LENGTH=420
Length = 420
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 126 VNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDL-- 183
+N K R R K +ER RR K++ L+ L+PN TK D+ASI+G+A+ Y+ +L
Sbjct: 205 LNRKGRGSKKR-KIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLR 263
Query: 184 -----QAQAKKLKTEVAGLEASLLVSQNYQATIE 212
+ +K + + E +V +N++A E
Sbjct: 264 TIDEFKLLVEKKRVKQRNREGDDVVDENFKAQSE 297
>AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1885146-1886564 REVERSE
LENGTH=420
Length = 420
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 126 VNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDL-- 183
+N K R R K +ER RR K++ L+ L+PN TK D+ASI+G+A+ Y+ +L
Sbjct: 205 LNRKGRGSKKR-KIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLR 263
Query: 184 -----QAQAKKLKTEVAGLEASLLVSQNYQATIE 212
+ +K + + E +V +N++A E
Sbjct: 264 TIDEFKLLVEKKRVKQRNREGDDVVDENFKAQSE 297
>AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:17334261-17335234 FORWARD
LENGTH=223
Length = 223
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 144 RRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLKTEVAGLEASL 201
R+RR R+ ++L L++LVPN TK+D ++++ DAV YV LQ Q K L +E + A L
Sbjct: 148 RKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYAPL 205
>AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13296655-13298139 FORWARD
LENGTH=428
Length = 428
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 123 TKIVNGKSRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYD 182
+K + K R K ++K +ER RR + E+ AL+ L+P+ +K D+ASI+ D + Y+ +
Sbjct: 200 SKEIRRKGRGKR-KNKPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINE 258
Query: 183 LQAQAKKLK 191
L+ + +LK
Sbjct: 259 LRRRVSELK 267
>AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:7507720-7508841 FORWARD
LENGTH=373
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLK 191
++ R+RR R+ EK+ L+ LVP TKMD AS++ +A +Y+ L+AQ K L+
Sbjct: 282 VAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQ 186
+SER+RR R+ E++ AL+ L+P K DKAS++ +A+ Y+ LQ Q
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 336
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQ 186
+SER+RR R+ E++ AL+ L+P K DKAS++ +A+ Y+ LQ Q
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 336
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQ 186
+SER+RR R+ E++ AL+ L+P K DKAS++ +A+ Y+ LQ Q
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 265
>AT2G31215.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13299807-13300302 FORWARD
LENGTH=129
Length = 129
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 134 TDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKLK 191
+ +S+T ++ER RR ++ + L+ L+PN TK +ASI+ D + Y+ +LQ +LK
Sbjct: 19 SKKSRTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVSELK 76
>AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 |
chr5:15036197-15037574 FORWARD LENGTH=307
Length = 307
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 126 VNGKSRPK---TDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYD 182
NGK +PK + + ++ + RR R+ E+L L+ LVPN TK+D +++ A+ YV
Sbjct: 196 TNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKF 255
Query: 183 LQAQAKKLKTE 193
LQ Q K L +
Sbjct: 256 LQVQVKVLAAD 266
>AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14220173 FORWARD
LENGTH=413
Length = 413
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQ 186
+SERRRR ++ E + AL+ L+P TK D++S++ D + YV LQ+Q
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQ 329
>AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14219887 FORWARD
LENGTH=340
Length = 340
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 141 ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQ 186
+SERRRR ++ E + AL+ L+P TK D++S++ D + YV LQ+Q
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQ 329
>AT5G56960.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:23038703-23041174 REVERSE
LENGTH=466
Length = 466
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 130 SRPKTDRSKTLISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKK 189
S P + + +ISER+RR ++ E ALR+L+P TK DKAS++ A + LQ + K
Sbjct: 281 SGPSATQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISK 340
Query: 190 LKTEVAGLEASL 201
L +EA L
Sbjct: 341 LLERNREVEAKL 352