Miyakogusa Predicted Gene

Lj3g3v3032100.3
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3032100.3 Non Chatacterized Hit- tr|I1J9U5|I1J9U5_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,90.99,0,tRNA-synt_1,Aminoacyl-tRNA synthetase, class Ia;
Anticodon_1,Valyl/Leucyl/Isoleucyl-tRNA synthetase,,CUFF.45191.3
         (921 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09620.1 | Symbols:  | ATP binding;leucine-tRNA ligases;amino...  1389   0.0  

>AT1G09620.1 | Symbols:  | ATP binding;leucine-tRNA
            ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP
            binding;aminoacyl-tRNA ligases | chr1:3113077-3116455
            REVERSE LENGTH=1091
          Length = 1091

 Score = 1389 bits (3595), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 648/920 (70%), Positives = 775/920 (84%), Gaps = 1/920 (0%)

Query: 1    MRSVGISDDEISKFQDPYKWLSYFPPLAVEDLKAFGLGCDWRRSFITTDMNPYFDSFVRW 60
            MRS G++D EI+ F++P +WL YFPPLAVEDL+A+GLGCDWRRSF+TTD+NP+FD+FVRW
Sbjct: 165  MRSFGLTDSEIANFREPSEWLYYFPPLAVEDLRAYGLGCDWRRSFVTTDVNPFFDAFVRW 224

Query: 61   QVRKLKSMGKIVKDVRYTIFSPLDGQPCADHDRASGEGVQPQEYTVIKMELIAPFPSKFE 120
            Q+RKLKSMGKIVKD RYTIFSPLDGQPCADHDRA+GEGVQPQEYT+IKME++ PFP K  
Sbjct: 225  QMRKLKSMGKIVKDRRYTIFSPLDGQPCADHDRATGEGVQPQEYTLIKMEVVKPFPLKLG 284

Query: 121  VLEGKKVFLAAATLRPETMYGQTNAWVLPDGKYGAFEINETEVFVMAHRAALNLAYQNHS 180
             LEGK+VFLAAATLRPETMYGQTNAWVLPDGKYGA+EI+ETEVF++  RAALNLAYQN S
Sbjct: 285  PLEGKRVFLAAATLRPETMYGQTNAWVLPDGKYGAYEISETEVFILTERAALNLAYQNFS 344

Query: 181  RVPEKPTCLLELTGHDLIGLPLRSPLSFNDTIYALPMLSILMDKGTGVVTSVPSDAPDDY 240
            + P++P+CL+ELTG+DLIGLPLRSPLS N+ IYALPML+IL +KGTG+VTSVPSDAPDDY
Sbjct: 345  KNPQEPSCLVELTGYDLIGLPLRSPLSVNEIIYALPMLTILTNKGTGIVTSVPSDAPDDY 404

Query: 241  MALHDLKSKPAFRAKFGVKDEWVMPFEIVPIIEVPEFGNKCAETVCLQMKIKSQNEKEKL 300
            MAL DL  KPA + K+GVK EW +P EI+PII +PEFG+K AE VCL +KIKSQN+KEKL
Sbjct: 405  MALQDLIKKPALQDKYGVKTEW-LPTEIIPIINIPEFGDKAAEKVCLDLKIKSQNDKEKL 463

Query: 301  AEAKKQTYLKGFTEGTMIVGEFAGKKVQEAKPLIRSKLLEIGQAIVYSEPEKRVMSRSGD 360
            AEAK+ TYLKGFTEGTM++GEF G+KVQE KP+I++KL+E G+AI+YSEPEK VMSRSGD
Sbjct: 464  AEAKRLTYLKGFTEGTMLIGEFFGRKVQEIKPIIKTKLIETGEAIIYSEPEKPVMSRSGD 523

Query: 361  ECVVALTDQWYITYGESEWQKLAEERLSSMSLFSDETRHGFEHTLSWLNQWACSRSFGLG 420
            ECVVALTDQWYITYGESEW+K+AEE LS M+L+SDETRHGFEHTLSWLNQWACSRSFGLG
Sbjct: 524  ECVVALTDQWYITYGESEWRKIAEECLSKMNLYSDETRHGFEHTLSWLNQWACSRSFGLG 583

Query: 421  TRIPWDEQFLVESLSDSTIYMAYYTVVHYLQNGDMYGSSQSSIKPQQLTDDVWDYIFCDG 480
            TRIPWDEQFLVESLSDS++YMAYYTV H   +GDMY  S+S I+PQQ+ D+VW+Y+FCDG
Sbjct: 584  TRIPWDEQFLVESLSDSSLYMAYYTVAHIFHDGDMYKGSKSLIRPQQMNDEVWEYLFCDG 643

Query: 481  PFPKSTDISSSLLEKMKKEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSKHHWPRGF 540
            P+PKS+DI S++L +MK+EF+YWYP DLRVSGKDLIQNHLTF IYNHTA+M+  +WPRG 
Sbjct: 644  PYPKSSDIPSAVLSEMKQEFDYWYPLDLRVSGKDLIQNHLTFFIYNHTALMANRNWPRGI 703

Query: 541  RCNGHIMLNNNKMSKSTGNFRTIRQAIEEFSADATRFSLADAGDGVDDANFVFETANAAI 600
            RCNGHIMLN+ KMSKSTGNFRT+RQ+IEEFSA  TRF LADAGDGVDDANF FETANAAI
Sbjct: 704  RCNGHIMLNSEKMSKSTGNFRTLRQSIEEFSATGTRFCLADAGDGVDDANFAFETANAAI 763

Query: 601  LGLTKEIAWYEEILAAESSMRTGPPSTYADRVFANEINIAVKTTEQNYSNYMFREALKTG 660
            L LTKE+ W EE+L  ESS+RTGPPSTYAD+VF N++NIA++ TE+ Y + +FREALK G
Sbjct: 764  LRLTKELTWMEEVLDVESSLRTGPPSTYADKVFENDMNIALRLTERAYKDCLFREALKNG 823

Query: 661  FYGLQTARDEYRFSCGVGGYNRELVWRFMDGQTRLLAPICPHYAEFIWRELLKKDGFVVK 720
            FY LQ ARDEYR SCG GG + +L+ +FMD QTRL+ PICPH+A+++WR++L K+G V+ 
Sbjct: 824  FYDLQAARDEYRLSCGTGGMHHDLLLKFMDVQTRLIVPICPHFADYVWRKVLNKEGCVLT 883

Query: 721  AGWPTADAPDLTLKRANEYLQESIGMMRXXXXXXXXXXXXXXXXXXPVASVAENKVTGLV 780
            AGWP ++ PDL LK AN+YLQ+SI +MR                   V +V E K+ GLV
Sbjct: 884  AGWPPSNEPDLVLKSANKYLQDSIVLMRKLLQKQLSGSKKGAKKGAQVTAVPEGKLKGLV 943

Query: 781  YVNEQFDGWKAECLNILQNKFNKDTRTFAPDSEILEALQHSSVGQSSNFKQTQKQCMPFL 840
            YVNEQFDGW+A CL ILQ++F++ T +F PD+E+L  L  + + +  N K  QK CMPFL
Sbjct: 944  YVNEQFDGWRAHCLRILQSRFDQQTCSFPPDTEMLAELSATLLQEGKNLKAIQKVCMPFL 1003

Query: 841  RFQKEQAIKLGAQALDLRLPFGEIEVLQENLDLIKRQINLEHVEIXXXXXXXXXXKAGPL 900
            +F+K++AI +G QAL+LRLPFGEIEVLQ N DLI+RQ+ LE VEI           AGP 
Sbjct: 1004 KFKKDEAISIGTQALNLRLPFGEIEVLQSNKDLIRRQLGLEEVEIYSASDPDDVSIAGPH 1063

Query: 901  ASLLNQNPPSPGKPTAIFLT 920
            ASLL QNPPSPG PTAIF+T
Sbjct: 1064 ASLLTQNPPSPGSPTAIFVT 1083