Miyakogusa Predicted Gene

Lj3g3v3032100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3032100.1 Non Chatacterized Hit- tr|I1J9U5|I1J9U5_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,88.47,0,seg,NULL;
Nucleotidylyl transferase,NULL; ValRS/IleRS/LeuRS editing
domain,Valyl/Leucyl/Isoleucyl-tR,CUFF.45191.1
         (1113 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09620.1 | Symbols:  | ATP binding;leucine-tRNA ligases;amino...  1570   0.0  
AT4G04350.1 | Symbols: EMB2369 | tRNA synthetase class I (I, L, ...    58   3e-08
AT5G16715.1 | Symbols: EMB2247 | ATP binding;valine-tRNA ligases...    57   8e-08

>AT1G09620.1 | Symbols:  | ATP binding;leucine-tRNA
            ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP
            binding;aminoacyl-tRNA ligases | chr1:3113077-3116455
            REVERSE LENGTH=1091
          Length = 1091

 Score = 1570 bits (4064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 744/1089 (68%), Positives = 883/1089 (81%), Gaps = 7/1089 (0%)

Query: 25   MASEGGGGAGKSFARRDRLREIEAKVQKWWEDGQVFKSEPGDAPPKPGEKFFGNFPFPYM 84
            MASE      KS+ARRDRL EIEA V+KWWED  VF++E  +  PKPGEKFF  FPFPYM
Sbjct: 1    MASES-----KSYARRDRLLEIEATVRKWWEDEDVFRAESCENLPKPGEKFFSTFPFPYM 55

Query: 85   NGYLHLGHAFSLSKLEFAAAFHRLRGANVLLPFAFHCTGMPIKASADKLAREIQCFGDXX 144
            NGYLH+GHAFSLSK++FA+A+HRLRGANVLLPF FHCTGMPIKASADKL REI+ FG+  
Sbjct: 56   NGYLHIGHAFSLSKVDFASAYHRLRGANVLLPFGFHCTGMPIKASADKLRREIEQFGNPP 115

Query: 145  X-XXXXXXXXXXXXXXXDDANEXXXXXXXXXXXXXXXXXTGTQVYQWEIMRSVGISDDEI 203
                              D                     G QVYQWEIMRS G++D EI
Sbjct: 116  VFTAEDTTKVPEVQEESSDTIALPIPGQFKGKKSKVAAKAGGQVYQWEIMRSFGLTDSEI 175

Query: 204  SKFQDPYKWLSYFPPLAVEDLKAFGLGCDWRRSFITTDMNPYFDSFVRWQVRKLKSMGKI 263
            + F++P +WL YFPPLAVEDL+A+GLGCDWRRSF+TTD+NP+FD+FVRWQ+RKLKSMGKI
Sbjct: 176  ANFREPSEWLYYFPPLAVEDLRAYGLGCDWRRSFVTTDVNPFFDAFVRWQMRKLKSMGKI 235

Query: 264  VKDVRYTIFSPLDGQPCADHDRASGEGVQPQEYTVIKMELIAPFPSKFEVLEGKKVFLAA 323
            VKD RYTIFSPLDGQPCADHDRA+GEGVQPQEYT+IKME++ PFP K   LEGK+VFLAA
Sbjct: 236  VKDRRYTIFSPLDGQPCADHDRATGEGVQPQEYTLIKMEVVKPFPLKLGPLEGKRVFLAA 295

Query: 324  ATLRPETMYGQTNAWVLPDGKYGAFEINETEVFVMAHRAALNLAYQNHSRVPEKPTCLLE 383
            ATLRPETMYGQTNAWVLPDGKYGA+EI+ETEVF++  RAALNLAYQN S+ P++P+CL+E
Sbjct: 296  ATLRPETMYGQTNAWVLPDGKYGAYEISETEVFILTERAALNLAYQNFSKNPQEPSCLVE 355

Query: 384  LTGHDLIGLPLRSPLSFNDTIYALPMLSILMDKGTGVVTSVPSDAPDDYMALHDLKSKPA 443
            LTG+DLIGLPLRSPLS N+ IYALPML+IL +KGTG+VTSVPSDAPDDYMAL DL  KPA
Sbjct: 356  LTGYDLIGLPLRSPLSVNEIIYALPMLTILTNKGTGIVTSVPSDAPDDYMALQDLIKKPA 415

Query: 444  FRAKFGVKDEWVMPFEIVPIIEVPEFGNKCAETVCLQMKIKSQNEKEKLAEAKKQTYLKG 503
             + K+GVK EW +P EI+PII +PEFG+K AE VCL +KIKSQN+KEKLAEAK+ TYLKG
Sbjct: 416  LQDKYGVKTEW-LPTEIIPIINIPEFGDKAAEKVCLDLKIKSQNDKEKLAEAKRLTYLKG 474

Query: 504  FTEGTMIVGEFAGKKVQEAKPLIRSKLLEIGQAIVYSEPEKRVMSRSGDECVVALTDQWY 563
            FTEGTM++GEF G+KVQE KP+I++KL+E G+AI+YSEPEK VMSRSGDECVVALTDQWY
Sbjct: 475  FTEGTMLIGEFFGRKVQEIKPIIKTKLIETGEAIIYSEPEKPVMSRSGDECVVALTDQWY 534

Query: 564  ITYGESEWQKLAEERLSSMSLFSDETRHGFEHTLSWLNQWACSRSFGLGTRIPWDEQFLV 623
            ITYGESEW+K+AEE LS M+L+SDETRHGFEHTLSWLNQWACSRSFGLGTRIPWDEQFLV
Sbjct: 535  ITYGESEWRKIAEECLSKMNLYSDETRHGFEHTLSWLNQWACSRSFGLGTRIPWDEQFLV 594

Query: 624  ESLSDSTIYMAYYTVVHYLQNGDMYGSSQSSIKPQQLTDDVWDYIFCDGPFPKSTDISSS 683
            ESLSDS++YMAYYTV H   +GDMY  S+S I+PQQ+ D+VW+Y+FCDGP+PKS+DI S+
Sbjct: 595  ESLSDSSLYMAYYTVAHIFHDGDMYKGSKSLIRPQQMNDEVWEYLFCDGPYPKSSDIPSA 654

Query: 684  LLEKMKKEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSKHHWPRGFRCNGHIMLNNN 743
            +L +MK+EF+YWYP DLRVSGKDLIQNHLTF IYNHTA+M+  +WPRG RCNGHIMLN+ 
Sbjct: 655  VLSEMKQEFDYWYPLDLRVSGKDLIQNHLTFFIYNHTALMANRNWPRGIRCNGHIMLNSE 714

Query: 744  KMSKSTGNFRTIRQAIEEFSADATRFSLADAGDGVDDANFVFETANAAILGLTKEIAWYE 803
            KMSKSTGNFRT+RQ+IEEFSA  TRF LADAGDGVDDANF FETANAAIL LTKE+ W E
Sbjct: 715  KMSKSTGNFRTLRQSIEEFSATGTRFCLADAGDGVDDANFAFETANAAILRLTKELTWME 774

Query: 804  EILAAESSMRTGPPSTYADRVFANEINIAVKTTEQNYSNYMFREALKTGFYGLQTARDEY 863
            E+L  ESS+RTGPPSTYAD+VF N++NIA++ TE+ Y + +FREALK GFY LQ ARDEY
Sbjct: 775  EVLDVESSLRTGPPSTYADKVFENDMNIALRLTERAYKDCLFREALKNGFYDLQAARDEY 834

Query: 864  RFSCGVGGYNRELVWRFMDGQTRLLAPICPHYAEFIWRELLKKDGFVVKAGWPTADAPDL 923
            R SCG GG + +L+ +FMD QTRL+ PICPH+A+++WR++L K+G V+ AGWP ++ PDL
Sbjct: 835  RLSCGTGGMHHDLLLKFMDVQTRLIVPICPHFADYVWRKVLNKEGCVLTAGWPPSNEPDL 894

Query: 924  TLKRANEYLQESIGMMRXXXXXXXXXXXXXXXXXXPVASVAENKVTGLVYVNEQFDGWKA 983
             LK AN+YLQ+SI +MR                   V +V E K+ GLVYVNEQFDGW+A
Sbjct: 895  VLKSANKYLQDSIVLMRKLLQKQLSGSKKGAKKGAQVTAVPEGKLKGLVYVNEQFDGWRA 954

Query: 984  ECLNILQNKFNKDTRTFAPDSEILEALQHSSVGQSSNFKQTQKQCMPFLRFQKEQAIKLG 1043
             CL ILQ++F++ T +F PD+E+L  L  + + +  N K  QK CMPFL+F+K++AI +G
Sbjct: 955  HCLRILQSRFDQQTCSFPPDTEMLAELSATLLQEGKNLKAIQKVCMPFLKFKKDEAISIG 1014

Query: 1044 AQALDLRLPFGEIEVLQENLDLIKRQINLEHVEIXXXXXXXXXXKAGPLASLLNQNPPSP 1103
             QAL+LRLPFGEIEVLQ N DLI+RQ+ LE VEI           AGP ASLL QNPPSP
Sbjct: 1015 TQALNLRLPFGEIEVLQSNKDLIRRQLGLEEVEIYSASDPDDVSIAGPHASLLTQNPPSP 1074

Query: 1104 GKPTAIFLT 1112
            G PTAIF+T
Sbjct: 1075 GSPTAIFVT 1083


>AT4G04350.1 | Symbols: EMB2369 | tRNA synthetase class I (I, L, M
           and V) family protein | chr4:2128129-2133030 FORWARD
           LENGTH=973
          Length = 973

 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 43  LREIEAKVQKWWEDGQVFKSEPGDAPPKPGEKFFGNFPFPYMNGYLHLGHAFSLSKLEFA 102
             EIE K Q++WED ++F++       KP       FP+P   G LH+GH    +  +  
Sbjct: 87  FHEIEPKWQRYWEDNRIFRTPDDVDTSKPKFYVLDMFPYPSGAG-LHVGHPLGYTATDIL 145

Query: 103 AAFHRLRGANVLLPFAFHCTGMPIKASA 130
           A   R++G NVL P  +   G+P +  A
Sbjct: 146 ARLRRMQGYNVLHPMGWDAFGLPAEQYA 173


>AT5G16715.1 | Symbols: EMB2247 | ATP binding;valine-tRNA
           ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP
           binding;aminoacyl-tRNA ligases | chr5:5485353-5493229
           FORWARD LENGTH=974
          Length = 974

 Score = 57.0 bits (136), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 98/463 (21%), Positives = 179/463 (38%), Gaps = 82/463 (17%)

Query: 510 IVGEFAGKKVQEAKPLIRSKLLEIGQAIVYSEPEKRVMSRS--GDECVVAL-TDQWYITY 566
           + G F G    E +  + + L EIG A V  EP    + RS  G E +  L + QW++  
Sbjct: 371 VAGLFCGLDRFEVREKLWADLEEIGLA-VKKEPHTLRVPRSQRGGEVIEPLVSKQWFVHM 429

Query: 567 GESEWQKLAEERLSSMSLFSDETRHGFEHTLSWLNQWACSRSFGLGTRIP-W-------D 618
                + L       +++  +     + H L+ +  W  SR    G RIP W       +
Sbjct: 430 DPLAEKALLAVENKELTIIPERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYVVGKDCE 489

Query: 619 EQFLVESLSDSTIYMAYYTVVHYLQNGDMYGSSQSSIKPQQLTDDVWDYIFCDGPFPKST 678
           E ++V   ++  +  A   +  Y ++ ++Y              DV D  F    +P ST
Sbjct: 490 EDYIVAKSAEEALEKA---LEKYGKDVEIYQDP-----------DVLDTWFSSSLWPFST 535

Query: 679 ----DISSSLLEKMKKEFEYWYPFDLRVSGKDL----IQNHLTFCIYNHTAIMSKHHWPR 730
               D+++       K+F  +YP ++  +G D+    +   +   I     +   H +  
Sbjct: 536 LGWPDVAA-------KDFNNFYPTNMLETGHDILFFWVARMVMMGIEFTGTVPFSHVYLH 588

Query: 731 GFRCNGHIMLNNNKMSKSTGNFRTIRQAIEEFSADATRFSLADAGDGVDDANFVFE--TA 788
           G   +        KMSKS GN       I++F  DA RF++A  G    D N   E  TA
Sbjct: 589 GLIRDSQ----GRKMSKSLGNVIDPLDTIKDFGTDALRFTIA-LGTAGQDLNLSTERLTA 643

Query: 789 NAA---------------ILGLTKEIAWYEEI---LAAESSMRTGP-PSTYADRVFANEI 829
           N A               +  L+   AW   +   L  E ++ + P P  +A     +++
Sbjct: 644 NKAFTNKLWNAGKFVLHSLPSLSDTSAWENLLDLKLDKEETLLSLPLPECWA----VSKL 699

Query: 830 NIAVKTTEQNYSNYMFREALKTGF---------YGLQTARDEYRFSCG--VGGYNRELVW 878
           +I + +   +Y    F +  +  +         + ++ ++     S G  V   ++ ++ 
Sbjct: 700 HILIDSVTASYEKLFFGDVGRETYDFFWSDFADWYIEASKSRLYGSGGNSVSLASQAVLL 759

Query: 879 RFMDGQTRLLAPICPHYAEFIWRELLKKDGFVVKAGWPTADAP 921
              +   +LL P  P   E +W+ L  +   ++ + WP    P
Sbjct: 760 YVFENILKLLHPFMPFVTEDLWQALPYRKEALIVSPWPQNSLP 802