Miyakogusa Predicted Gene
- Lj3g3v3031050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3031050.1 Non Chatacterized Hit- tr|D7STD9|D7STD9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.82,2e-18,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical;
PPR_2,Pentatricopeptide,CUFF.45161.1
(465 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 312 3e-85
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 175 7e-44
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 175 7e-44
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 2e-43
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 9e-41
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 160 2e-39
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 3e-39
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 8e-38
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 1e-36
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 149 5e-36
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 6e-36
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 7e-36
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 9e-36
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 145 4e-35
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 8e-35
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 1e-34
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 143 3e-34
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 4e-34
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 141 1e-33
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 2e-33
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 4e-33
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 4e-33
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 139 6e-33
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 7e-33
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 4e-32
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 5e-32
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 7e-32
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 7e-32
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 1e-31
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 133 3e-31
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 3e-31
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 4e-31
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 5e-30
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 5e-29
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 9e-29
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 124 2e-28
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 121 9e-28
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 2e-27
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 4e-27
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 117 2e-26
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 5e-24
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 107 2e-23
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 105 5e-23
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 105 6e-23
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 105 9e-23
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 100 2e-21
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 98 1e-20
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 95 1e-19
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 94 2e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 92 8e-19
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 89 5e-18
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 89 9e-18
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 87 3e-17
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 86 5e-17
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 84 3e-16
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 80 3e-15
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 75 8e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 75 1e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 71 1e-12
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 71 2e-12
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 61 2e-09
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 61 2e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 60 3e-09
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 60 3e-09
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 60 3e-09
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 60 4e-09
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 60 4e-09
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 59 9e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 59 1e-08
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 58 1e-08
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 57 3e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 57 3e-08
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 57 4e-08
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 56 5e-08
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 56 6e-08
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 56 6e-08
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 55 7e-08
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 55 1e-07
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 55 1e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 54 2e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 54 2e-07
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 54 2e-07
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 54 2e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 53 5e-07
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 52 6e-07
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 52 7e-07
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 52 8e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 52 1e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 51 1e-06
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 51 2e-06
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 51 2e-06
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/423 (40%), Positives = 253/423 (59%), Gaps = 29/423 (6%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++D +L+ M ++G P++ +YN +I+G CR R KE +L +M +RG S D TY
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G+C+ G +A M A+M+ G+ P TY LI ++C+ G +++A + +M
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ P++ YT L++ + KG ++A + EM + GF SPS+V YNA I+G CV G
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF-----SPSVVTYNALINGHCVTG 429
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
++E+A+ +L M + GLSPDVVSY+ V+ GFC+ + +A +K EM EKGI Y
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 274 SLLD------------DL----------SDEVTYSTLINDFHAQGNLMDAYCLESEMSEY 311
SL+ DL DE TY+ LIN + +G+L A L +EM E
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 312 SYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKT 371
L D V SV INGLNK++ T EAKR L++ FY++ S+P+ TY TLIENCSN EFK+
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE--SVPSDVTYHTLIENCSNIEFKS 607
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETV 431
VV L+K F M+G+ +A + + ML N+KP+G YN++I HCR G++ KAY +YKE V
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Query: 432 HSG 434
SG
Sbjct: 668 KSG 670
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 177/334 (52%), Gaps = 17/334 (5%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L P+ER + V +++A+ +L+ M GFSPSV TYN LI+G+C + ++A+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L DM ++GLSPDV +Y ++ GFC++ + +A +K +MV KGI PD TY LI
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C + R +A DL+ EMLR G+ P ++ YT L+N YC +G+ KAL L +EM+ KG LPD
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD- 554
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKG-----FCKIGE 249
+V Y+ I+G R EA +L + P V+Y +I+ F +
Sbjct: 555 ----VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 250 PVKAFELKLEMDEKGIPLYEDIYQSLL--DDLSDEVTYSTLINDFHAQGNLMDAYCLESE 307
+K F +K M E + +++S+L + D Y+ +I+ G++ AY L E
Sbjct: 611 LIKGFCMKGMMTEA-----DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 308 MSEYSYLTDDVISSVRINGLNKKATTIEAKRSLV 341
M + +L V + L+K+ E +V
Sbjct: 666 MVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 148/325 (45%), Gaps = 50/325 (15%)
Query: 119 GILPDADTY-GILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSK 177
G +P +Y +L T+ K +S A ++F EML VSP+ + Y L+ +CF G
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 178 ALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSY 237
AL L D+M KG LP+ +V YN I G C L ++++ +LR MA GL P+++SY
Sbjct: 224 ALTLFDKMETKGCLPN-----VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 238 TNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGN 297
VI G C+ G + + EM+ +G L DEVTY+TLI + +GN
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSL-------------DEVTYNTLIKGYCKEGN 325
Query: 298 LMDAYCLESEMSEYSYLTDDVI-------SSVRINGLNKKATTIEAKRSLVRWFYQDCLS 350
A + +EM + LT VI S + +N+ ++ R VR
Sbjct: 326 FHQALVMHAEMLRHG-LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR--VRGL------ 376
Query: 351 IPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLL 410
P RTY TL++ FS +G ++A + +M + P YN L
Sbjct: 377 CPNERTYTTLVDG---------------FSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 411 IFDHCRHGNVHKAYDMYKETVHSGV 435
I HC G + A + ++ G+
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGL 446
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 96/234 (41%), Gaps = 50/234 (21%)
Query: 13 VILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKE 72
V L PDE + +++ ++KA + M+ +G P V TY+ LI+G + R +E
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 73 AVGILRDMAKRGLSPDVDTYYPLI--C-------------GFCQTGKLGKAFEMKAKMVH 117
A +L + P TY+ LI C GFC G + +A ++ M+
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG 633
Query: 118 KGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKG---- 173
K PD Y I+I CR G + KA+ L+ EM++ G H L+ +G
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Query: 174 ------------EFSKA-------------------LDLPDEMINKGFLPDGIS 196
E S+A LD+ EM GFLP+GIS
Sbjct: 694 LNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 205/435 (47%), Gaps = 46/435 (10%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H + + ++ +AH++L M ++G++P V +Y+ +++GYCR + ++ M ++GL
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P+ Y +I C+ KL +A E ++M+ +GILPD Y LI C++G + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
F EM ++P YT +++ +C G+ +A L EM KG PD ++ +
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT-----FTEL 427
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
I+G C G +++A + M G SP+VV+YT +I G CK G+ A EL EM + G+
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 266 PLYEDIYQSLLDDLSDEVTYS---TLINDFHAQG---------NLMDAYCLESEMSEYSY 313
Y S+++ L L+ +F A G LMDAYC EM +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 314 LTDDVIS----------SVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN 363
+ +++ +V +NG +E L+ W ++ P T+++L++
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHG-MLEDGEKLLNWMLAKGIA-PNATTFNSLVKQ 605
Query: 364 -CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHK 422
C N K + KD RG+ P+G Y L+ HC+ N+ +
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVG----------------PDGKTYENLVKGHCKARNMKE 649
Query: 423 AYDMYKETVHSGVEI 437
A+ +++E G +
Sbjct: 650 AWFLFQEMKGKGFSV 664
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 151/323 (46%), Gaps = 18/323 (5%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD + + + + +A + M +G P T+ ELI+GYC+A K+A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ M + G SP+V TY LI G C+ G L A E+ +M G+ P+ TY ++ L
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C+ G + +A L E G++ YT LM+ YC GE KA ++ EM+ K G
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-----G 556
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ P++V +N ++G C+ G +E+ +L M G++P+ ++ +++K +C A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
+ +M +G+ D TY L+ N+ +A+ L EM +
Sbjct: 617 AIYKDMCSRGVG-------------PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 315 TDDVISSVRINGLNKKATTIEAK 337
SV I G K+ +EA+
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAR 686
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 200/424 (47%), Gaps = 42/424 (9%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
DP ++ QV L++ + +A + + M+ G SV + N + + D +K A
Sbjct: 174 DPRVFDVFFQV--LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATA 230
Query: 76 IL--RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
I+ R+ + G+ +V +Y +I CQ G++ +A + M KG PD +Y ++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
CR G L K + L M R+G+ P+ YIY ++ C + ++A + EMI +G LPD
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
V+Y I G C G + A M ++PDV++YT +I GFC+IG+ V+A
Sbjct: 351 -----TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
+L EM KG+ D VT++ LIN + G++ DA+ + + M +
Sbjct: 406 GKLFHEMFCKGLE-------------PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 314 LTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTV 372
+ V + I+GL K+ +++ L+ ++ L P TY++++ C + +
Sbjct: 453 SPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEA 510
Query: 373 VGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVH 432
V LV +F GL + Y L+ +C+ G + KA ++ KE +
Sbjct: 511 VKLVGEFEAAGL----------------NADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 433 SGVE 436
G++
Sbjct: 555 KGLQ 558
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 136/276 (49%), Gaps = 13/276 (4%)
Query: 2 MITASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELI 61
MI A C P+ + + L +D A+ +L M G P++ TYN ++
Sbjct: 447 MIQAGC--------SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 62 HGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGIL 121
+G C++ +EAV ++ + GL+ D TY L+ +C++G++ KA E+ +M+ KG+
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 122 PDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDL 181
P T+ +L+ C G L L ML +G++P+ + L+ YC + A +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 182 PDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI 241
+M ++G PDG + Y + G C ++EA + + M G S V +Y+ +I
Sbjct: 619 YKDMCSRGVGPDGKT-----YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Query: 242 KGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
KGF K + ++A E+ +M +G+ ++I+ D
Sbjct: 674 KGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
++ +L +M+ +G +P+ T+N L+ YC + K A I +DM RG+ PD TY
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
L+ G C+ + +A+ + +M KG TY +LI ++ + +A ++F +M REG
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
++ K I+ + +KG+ + P + I + +L D
Sbjct: 697 LAADKEIFDFFSDTK-YKGKRPDTIVDPIDEIIENYLVD 734
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 205/435 (47%), Gaps = 46/435 (10%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H + + ++ +AH++L M ++G++P V +Y+ +++GYCR + ++ M ++GL
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P+ Y +I C+ KL +A E ++M+ +GILPD Y LI C++G + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
F EM ++P YT +++ +C G+ +A L EM KG PD ++ +
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT-----FTEL 427
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
I+G C G +++A + M G SP+VV+YT +I G CK G+ A EL EM + G+
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 266 PLYEDIYQSLLDDLSDEVTYS---TLINDFHAQG---------NLMDAYCLESEMSEYSY 313
Y S+++ L L+ +F A G LMDAYC EM +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 314 LTDDVIS----------SVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN 363
+ +++ +V +NG +E L+ W ++ P T+++L++
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHG-MLEDGEKLLNWMLAKGIA-PNATTFNSLVKQ 605
Query: 364 -CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHK 422
C N K + KD RG+ P+G Y L+ HC+ N+ +
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVG----------------PDGKTYENLVKGHCKARNMKE 649
Query: 423 AYDMYKETVHSGVEI 437
A+ +++E G +
Sbjct: 650 AWFLFQEMKGKGFSV 664
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 151/323 (46%), Gaps = 18/323 (5%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD + + + + +A + M +G P T+ ELI+GYC+A K+A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ M + G SP+V TY LI G C+ G L A E+ +M G+ P+ TY ++ L
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C+ G + +A L E G++ YT LM+ YC GE KA ++ EM+ K G
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-----G 556
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ P++V +N ++G C+ G +E+ +L M G++P+ ++ +++K +C A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
+ +M +G+ D TY L+ N+ +A+ L EM +
Sbjct: 617 AIYKDMCSRGVG-------------PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 315 TDDVISSVRINGLNKKATTIEAK 337
SV I G K+ +EA+
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAR 686
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 200/424 (47%), Gaps = 42/424 (9%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
DP ++ QV L++ + +A + + M+ G SV + N + + D +K A
Sbjct: 174 DPRVFDVFFQV--LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATA 230
Query: 76 IL--RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
I+ R+ + G+ +V +Y +I CQ G++ +A + M KG PD +Y ++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
CR G L K + L M R+G+ P+ YIY ++ C + ++A + EMI +G LPD
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
V+Y I G C G + A M ++PDV++YT +I GFC+IG+ V+A
Sbjct: 351 -----TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
+L EM KG+ D VT++ LIN + G++ DA+ + + M +
Sbjct: 406 GKLFHEMFCKGLE-------------PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 314 LTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTV 372
+ V + I+GL K+ +++ L+ ++ L P TY++++ C + +
Sbjct: 453 SPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEA 510
Query: 373 VGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVH 432
V LV +F GL + Y L+ +C+ G + KA ++ KE +
Sbjct: 511 VKLVGEFEAAGL----------------NADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 433 SGVE 436
G++
Sbjct: 555 KGLQ 558
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 136/276 (49%), Gaps = 13/276 (4%)
Query: 2 MITASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELI 61
MI A C P+ + + L +D A+ +L M G P++ TYN ++
Sbjct: 447 MIQAGC--------SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 62 HGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGIL 121
+G C++ +EAV ++ + GL+ D TY L+ +C++G++ KA E+ +M+ KG+
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 122 PDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDL 181
P T+ +L+ C G L L ML +G++P+ + L+ YC + A +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 182 PDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI 241
+M ++G PDG + Y + G C ++EA + + M G S V +Y+ +I
Sbjct: 619 YKDMCSRGVGPDGKT-----YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Query: 242 KGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
KGF K + ++A E+ +M +G+ ++I+ D
Sbjct: 674 KGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
++ +L +M+ +G +P+ T+N L+ YC + K A I +DM RG+ PD TY
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
L+ G C+ + +A+ + +M KG TY +LI ++ + +A ++F +M REG
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
++ K I+ + +KG+ + P + I + +L D
Sbjct: 697 LAADKEIFDFFSDTK-YKGKRPDTIVDPIDEIIENYLVD 734
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 203/429 (47%), Gaps = 37/429 (8%)
Query: 8 KNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRA 67
+N V+LD +L + +++K+ ++L + GFSP+V Y LI G C+
Sbjct: 154 ENKSKVVLDVYSFGIL--IKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKK 211
Query: 68 DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTY 127
++A + +M K GL + TY LI G + G + FEM KM G+ P+ TY
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 128 GILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
++ LC+ GR AF +F EM GVS + Y L+ C + + ++A + D+M +
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 188 KGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKI 247
DGI+P+L+ YN I G C +G++ +AL + R + GLSP +V+Y ++ GFC+
Sbjct: 332 -----DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 248 GEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESE 307
G+ A ++ EM+E+GI +VTY+ LI+ F N+ A L
Sbjct: 387 GDTSGAAKMVKEMEERGIK-------------PSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 308 MSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNN 367
M E + D SV I+G K EA R ++C P Y+T+I
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE--PNEVIYNTMI------ 485
Query: 368 EFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMY 427
+G K+ G +++A K +M P A Y +I C+ +A +
Sbjct: 486 -----LGYCKE----GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Query: 428 KETVHSGVE 436
++ + SG++
Sbjct: 537 EKMIDSGID 545
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A M+K M RG PS TY LI + R+D ++A+ + M + GL PDV TY LI
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
GFC G++ +A + MV K P+ Y +IL C++G +A L EM + ++P
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP 511
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
+ Y ++ C + + +A L ++MI+ G P SL+
Sbjct: 512 NVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
Query: 37 KAHNMLKYMIVR------GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVD 90
++ NM K + +R G P V TY+ LIHG+C + EA + + M ++ P+
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 91 TYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM 150
Y +I G+C+ G +A ++ +M K + P+ +Y +I LC++ + +A L +M
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Query: 151 LREGVSPHKYIYT 163
+ G+ P I +
Sbjct: 540 IDSGIDPSTSILS 552
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD +H Q+++A + K M+ + P+ YN +I GYC+ A+
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
+L++M ++ L+P+V +Y +I C+ K +A + KM+ GI P ++
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 178/376 (47%), Gaps = 35/376 (9%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GF +V +N L++ +C+ +A + ++ KR L P V ++ LI G+C+ G L +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
F +K +M PD TY LI LC++ ++ A LF EM + G+ P+ I+T L++
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+ GE +DL E K L G+ P +V+YN ++G C G + A I+ GM
Sbjct: 355 HSRNGE----IDLMKESYQK-MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
GL PD ++YT +I GFC+ G+ A E++ EMD+ GI L D V +S L
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL-------------DRVGFSAL 456
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDC 348
+ +G ++DA EM DDV ++ ++ KK + L++ D
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDA-QTGFKLLKEMQSDG 515
Query: 349 LSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYN 408
+P+ TY+ L+ GL K G A D ML+ P+ YN
Sbjct: 516 -HVPSVVTYNVLLN-----------GLCK----LGQMKNADMLLDAMLNIGVVPDDITYN 559
Query: 409 LLIFDHCRHGNVHKAY 424
L+ H RH N K Y
Sbjct: 560 TLLEGHHRHANSSKRY 575
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 144/290 (49%), Gaps = 20/290 (6%)
Query: 2 MITASCKNNK------------AVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRG 49
+I A CK NK L P++ + +H ++D + M+ +G
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
P + YN L++G+C+ A I+ M +RGL PD TY LI GFC+ G + A
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETAL 435
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
E++ +M GI D + L+ +C++GR+ A EMLR G+ P YT +M+ +
Sbjct: 436 EIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAF 495
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
C KG+ L EM + DG PS+V YN ++G C LG+++ A +L M ++G
Sbjct: 496 CKKGDAQTGFKLLKEMQS-----DGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550
Query: 230 LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
+ PD ++Y +++G + K + ++ E GI Y+S++++L
Sbjct: 551 VVPDDITYNTLLEGHHRHANSSKRY---IQKPEIGIVADLASYKSIVNEL 597
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 148/329 (44%), Gaps = 20/329 (6%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+ A + + R P+V ++N LI+GYC+ E + M K PDV TY
Sbjct: 255 NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYS 314
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI C+ K+ A + +M +G++P+ + LI R G + + + +ML +
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ P +Y L+N +C G+ A ++ D MI +G PD I+ Y I G C G
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT-----YTTLIDGFCRGG 429
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
VE AL I + M G+ D V ++ ++ G CK G + A EM GI
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK------- 482
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
D+VTY+ +++ F +G+ + L EM ++ V +V +NGL K
Sbjct: 483 ------PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIE 362
A L + +P TY+TL+E
Sbjct: 537 KNADMLLDAML--NIGVVPDDITYNTLLE 563
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 148/319 (46%), Gaps = 18/319 (5%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L P + + ++ V +D+ + M P V TY+ LI+ C+ ++ A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
G+ +M KRGL P+ + LI G + G++ E KM+ KG+ PD Y L+
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C+ G L A ++ M+R G+ P K YT L++ +C G+ AL++ EM +G
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ-----NG 445
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
I V ++A + G C GRV +A LR M G+ PD V+YT ++ FCK G+ F
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
+L EM G + VTY+ L+N G + +A L M +
Sbjct: 506 KLLKEMQSDG-------------HVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Query: 315 TDDVISSVRINGLNKKATT 333
DD+ + + G ++ A +
Sbjct: 553 PDDITYNTLLEGHHRHANS 571
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 142/352 (40%), Gaps = 70/352 (19%)
Query: 124 ADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPH-KYIYTRLMNYY-----------CF 171
+ ++ L + RKG+ S A +F+ ++ V+P ++ LM Y CF
Sbjct: 135 TEAQSLIELVVSRKGKNS-ASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCF 193
Query: 172 KGEFSKALDLP--------DEMINK-------GF----LPDGISPSLVIYNARIHGCCVL 212
+ D+P D M+ GF L G ++ ++N ++ C
Sbjct: 194 RLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKE 253
Query: 213 GRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIY 272
G + +A + + L P VVS+ +I G+CK+G + F LK +M++
Sbjct: 254 GNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTR------ 307
Query: 273 QSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKAT 332
D TYS LIN + + A+ L EM + + +DVI + I+G ++
Sbjct: 308 -------PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 333 TIEAKRSLVRWFYQDCLS---IPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKA 388
L++ YQ LS P Y+TL+ C N + +V RGL
Sbjct: 361 I-----DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL---- 411
Query: 389 AKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRA 440
+P+ Y LI CR G+V A ++ KE +G+E+ R
Sbjct: 412 ------------RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 189/424 (44%), Gaps = 44/424 (10%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++D A + L M+ G SV YN LI+G+C+ A G + +M + L P V TY
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ G+C GK+ KA + +M KGI P T+ L+ L R G + A LF EM
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
V P++ Y ++ YC +G+ SKA + EM KG +PD S Y IHG C+ G
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS-----YRPLIHGLCLTG 591
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
+ EA + G+ + + YT ++ GFC+ G+ +A + EM ++G+ L Y
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 274 SLLDDL----------------------SDEVTYSTLINDFHAQGNLMDAYCLESEMSEY 311
L+D D+V Y+++I+ G+ +A+ + M
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 312 SYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKT 371
+ ++V + INGL K EA+ + Q S+P TY ++ + E
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSK--MQPVSSVPNQVTYGCFLDILTKGEVDM 769
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETV 431
KA + H+ +L G A YN+LI CR G + +A ++ +
Sbjct: 770 --------------QKAVELHNAILKG-LLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 432 HSGV 435
GV
Sbjct: 815 GDGV 818
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 202/461 (43%), Gaps = 70/461 (15%)
Query: 12 AVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFK 71
+V + PD + SL + + +A M+ +M G ++ YN LI G C+ +
Sbjct: 220 SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVW 279
Query: 72 EAVGILRDMAKRGLSPDVDTYYPLICGFCQT----------------------------- 102
EAVGI +D+A + L PDV TY L+ G C+
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 103 ------GKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
GK+ +A + ++V G+ P+ Y LI +LC+ + +A LF M + G+
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR 399
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P+ Y+ L++ +C +G+ AL EM++ G+ S+ YN+ I+G C G +
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDT-----GLKLSVYPYNSLINGHCKFGDIS 454
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
A G + M + L P VV+YT+++ G+C G+ KA L EM KGI IY
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA--PSIY---- 508
Query: 277 DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEA 336
T++TL++ G + DA L +EM+E++ + V +V I G ++ +A
Sbjct: 509 -------TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 337 KRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKML 396
L + +P +Y LI + G A +A D +
Sbjct: 562 FEFLKEMTEKGI--VPDTYSYRPLIHG---------------LCLTGQASEAKVFVDGLH 604
Query: 397 HGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
GN + Y L+ CR G + +A + +E V GV++
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 179/417 (42%), Gaps = 43/417 (10%)
Query: 41 MLKYMIVR-GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGF 99
+ K MI + P V T + L+HG + F A+ + DM G+ PDV Y +I
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL 237
Query: 100 CQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHK 159
C+ L +A EM A M G + Y +LI LC+K ++ +A + ++ + + P
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 160 YIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEAL 219
Y L+ C EF L++ DEM+ F SPS ++ + G G++EEAL
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEMLCLRF-----SPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 220 GILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG-IPLYEDIYQSLLDD 278
+++ + D G+SP++ Y +I CK K E +L D G I L
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCK---GRKFHEAELLFDRMGKIGLR---------- 399
Query: 279 LSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKR 338
++VTYS LI+ F +G L A EM + + ING + K I A
Sbjct: 400 -PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING-HCKFGDISAAE 457
Query: 339 SLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLA------------ 385
+ L P TY +L+ CS + + L + + +G+A
Sbjct: 458 GFMAEMINKKLE-PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 386 -------HKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
A K ++M N KP YN++I +C G++ KA++ KE G+
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 139/285 (48%), Gaps = 22/285 (7%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H ++++A ++ + M+ RG + Y LI G + K G+L++M RGL
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD Y +I +TG +AF + M+++G +P+ TY +I LC+ G +++A
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGE--FSKALDLPDEMINKGFLPDGISPSLVIYN 203
L +M P++ Y ++ KGE KA++L + ++ KG L + + YN
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILT-KGEVDMQKAVELHNAIL-KGLLANTAT-----YN 791
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
I G C GR+EEA ++ M G+SPD ++YT +I C+ + KA EL M EK
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 264 GIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
GI D V Y+TLI+ G + A L +EM
Sbjct: 852 GIR-------------PDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 103/228 (45%), Gaps = 40/228 (17%)
Query: 41 MLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFC 100
+LK M RG P Y +I + FKEA GI M G P+ TY +I G C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 101 QTGKLGKAFEMKAKM-----------------------------------VHKGILPDAD 125
+ G + +A + +KM + KG+L +
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788
Query: 126 TYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEM 185
TY +LI CR+GR+ +A +L M+ +GVSP YT ++N C + + KA++L + M
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 186 INKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPD 233
KG PD ++ YN IHGCCV G + +A + M GL P+
Sbjct: 849 TEKGIRPDRVA-----YNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 35/224 (15%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEA- 73
L PD+ S + + +A + MI G P+ TY +I+G C+A EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 74 ---------------------VGILR----DMAK---------RGLSPDVDTYYPLICGF 99
+ IL DM K +GL + TY LI GF
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 100 CQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHK 159
C+ G++ +A E+ +M+ G+ PD TY +I LCR+ + KA +L+ M +G+ P +
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 160 YIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
Y L++ C GE KA +L +EM+ +G +P+ + N
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSN 901
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 201/445 (45%), Gaps = 55/445 (12%)
Query: 1 MMITASCKNNKAVILDPDERNLLSQVH------------SLLNVYQ----VDKAHNMLKY 44
+M+ A CK+ K + LSQV +L++ Y +++A ++
Sbjct: 240 IMVNALCKDGKMEKVG----TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
M +GFSP V TYN +I+G C+ +++ A + +M + GLSPD TY L+ C+ G
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
+ + ++ + M + ++PD + ++ R G L KA F + G+ P IYT
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
L+ YC KG S A++L +EM+ +G D +V YN +HG C + EA +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMD-----VVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT 284
M + L PD + T +I G CK+G A EL +M EK I L D VT
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL-------------DVVT 517
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWF 344
Y+TL++ F G++ A + ++M L + S+ +N L K E
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE--------- 568
Query: 345 YQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEG 404
A+R +D +I ++K + G A +KM+ + P+
Sbjct: 569 --------AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 405 AIYNLLIFDHCRHGNVHKAYDMYKE 429
YN LI+ R N+ KA+ + K+
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKK 645
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 181/413 (43%), Gaps = 43/413 (10%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
V++L +++K L + +G P + TYN LI Y +EA ++ M +G
Sbjct: 242 VNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF 301
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
SP V TY +I G C+ GK +A E+ A+M+ G+ PD+ TY L++ C+KG + +
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
+F +M V P ++ +M+ + G KAL + + G +PD VIY
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN-----VIYTIL 416
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCK---IGEPVKAFELKLEMDE 262
I G C G + A+ + M G + DVV+Y ++ G CK +GE K F EM E
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN---EMTE 473
Query: 263 KGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSV 322
+ L+ D Y T + LI+ GNL +A L +M E D V +
Sbjct: 474 RA--LFPDSY-----------TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 323 RINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSM 381
++G K AK ++ L P +Y L+ CS
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPI--SYSILVNALCS---------------- 562
Query: 382 RGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
+G +A + D+M+ N KP I N +I +CR GN ++ + G
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 149/294 (50%), Gaps = 20/294 (6%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H L + +A + M R P T LI G+C+ + A+ + + M ++ +
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
DV TY L+ GF + G + A E+ A MV K ILP +Y IL+ LC KG L++AF
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
++ EM+ + + P I ++ YC G S ++MI++GF+PD IS YN
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS-----YNTL 626
Query: 206 IHGCCVLGRVEEALGILRGMADM--GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
I+G + +A G+++ M + GL PDV +Y +++ GFC+ + +A + +M E+
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 264 GIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDD 317
G+ D TY+ +IN F +Q NL +A+ + EM + + DD
Sbjct: 687 GVN-------------PDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 166/375 (44%), Gaps = 35/375 (9%)
Query: 55 ATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAK 114
+ ++ LI Y +A + +EA + +G + +D LI + G + A+ + +
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 115 MVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
+ G+ + T I++ LC+ G++ K ++ +GV P Y L++ Y KG
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 175 FSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
+A +L + M KGF SP + YN I+G C G+ E A + M GLSPD
Sbjct: 286 MEEAFELMNAMPGKGF-----SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHA 294
+Y +++ CK G+ V+ ++ +M + D + D V +S++++ F
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSR-------------DVVPDLVCFSSMMSLFTR 387
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
GNL A + + E + D+VI ++ I G +K A Q C
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV- 446
Query: 355 RTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDH 414
TY+T++ GL K R + +A K ++M P+ +LI H
Sbjct: 447 -TYNTILH-----------GLCK----RKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 415 CRHGNVHKAYDMYKE 429
C+ GN+ A +++++
Sbjct: 491 CKLGNLQNAMELFQK 505
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 3/250 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD L + + + A + + M + V TYN L+ G+ + A
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
I DM + + P +Y L+ C G L +AF + +M+ K I P +I
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
CR G S +M+ EG P Y L+ + + SKA L +M + G
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE---QGG 652
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ P + YN+ +HG C +++EA +LR M + G++PD +YT +I GF +AF
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Query: 255 ELKLEMDEKG 264
+ EM ++G
Sbjct: 713 RIHDEMLQRG 722
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 135/342 (39%), Gaps = 57/342 (16%)
Query: 130 LILTLCRKGRLSKAFDLFLEMLRE-GVS----------------PHKYIYTRLMNYYCFK 172
+I L R GRLS A L M+R GVS + ++ L+ Y
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQA 178
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
+ +A + + +KGF + S+ NA I +G VE A G+ + ++ G+
Sbjct: 179 RKLREAHEAFTLLRSKGF-----TVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233
Query: 233 DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDF 292
+V + ++ CK G+ K ++ EKG+ Y DI VTY+TLI+ +
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV--YPDI-----------VTYNTLISAY 280
Query: 293 HAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIP 352
++G + +A+ L + M + + INGL K AK + LS P
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML-RSGLS-P 338
Query: 353 AYRTYDTLI-ENCSNNEFKTVVGLVKD-------------------FSMRGLAHKAAKAH 392
TY +L+ E C + + D F+ G KA
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 393 DKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
+ + P+ IY +LI +CR G + A ++ E + G
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 195/408 (47%), Gaps = 35/408 (8%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A +L M+ RGF+ +V +N L+ G CR +AV +LR+M + L PDV +Y +I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
GFC+ +L KA E+ +M G T+GILI C+ G++ +A EM G+
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+YT L+ +C GE + L DE++ + G SP + YN I G C LG+++E
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLER-----GDSPCAITYNTLIRGFCKLGQLKE 300
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
A I M + G+ P+V +YT +I G C +G+ +A +L M EK D
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK-------------D 347
Query: 278 DLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAK 337
+ + VTY+ +IN G + DA + M + D++ ++ + GL K EA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 338 RSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLH 397
+ L + P +Y+ LI GL K+ + H+A +D ++
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIH-----------GLCKENRL----HQALDIYDLLVE 452
Query: 398 GNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPSFT 445
+ N+L+ + G+V+KA +++K+ S +I R ++T
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS--KIVRNSDTYT 498
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 191/434 (44%), Gaps = 42/434 (9%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
S + + ++D+ + ++ RG SP TYN LI G+C+ + KEA I M +R
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
G+ P+V TY LI G C GK +A ++ M+ K P+A TY I+I LC+ G ++ A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
++ M + P Y L+ C KG+ +A L M+ D P ++ YN
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD---PDVISYN 428
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
A IHG C R+ +AL I + + + D V+ ++ K G+ KA EL ++ +
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS 488
Query: 264 GIPLYEDIYQSLLD---------------------DLSDEV-TYSTLINDFHAQGNLMDA 301
I D Y +++D +L V Y+ L++ +G+L A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 302 YCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLI 361
+ L EM + D V ++ I+G + KA I++ SL+ + LS P TY LI
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDG-SLKAGDIKSAESLLVGMSRAGLS-PDLFTYSKLI 606
Query: 362 ENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVH 421
F G +A DKM+ ++P+ I + ++ G
Sbjct: 607 NR---------------FLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651
Query: 422 KAYDMYKETVHSGV 435
K ++ K+ V +
Sbjct: 652 KLTELVKKLVDKDI 665
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 184/396 (46%), Gaps = 33/396 (8%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+++KA + M G S S+ T+ LI +C+A + EA+G L++M GL D+ Y
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI GFC G+L + + +++ +G P A TY LI C+ G+L +A ++F M+
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
GV P+ Y YT L++ C G+ +AL L + MI K P+ ++ YN I+ C G
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT-----YNIIINKLCKDG 366
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
V +A+ I+ M PD ++Y ++ G C G ++DE LY +
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG----------DLDEASKLLYLMLKD 416
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
S D D ++Y+ LI+ + L A + + E D V +++ +N K
Sbjct: 417 SSYTD-PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG-- 473
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHD 393
+ +++ W + D+ I S+ T ++ F G+ + A
Sbjct: 474 -DVNKAMELW----------KQISDSKIVRNSD----TYTAMIDGFCKTGMLNVAKGLLC 518
Query: 394 KMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKE 429
KM +P YN L+ C+ G++ +A+ +++E
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 182/408 (44%), Gaps = 40/408 (9%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q+ A ++ + + G S + A N L+ R+ + A R M + + +
Sbjct: 53 QLKNAVSVFQQAVDSGSSLAFAG-NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ + Q K G AF + A M+ +G + + IL+ LCR KA L EM R
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
+ P + Y ++ +C E KAL+L +EM KG G S SLV + I C G
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEM--KG---SGCSWSLVTWGILIDAFCKAG 226
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
+++EA+G L+ M MGL D+V YT++I+GFC GE ++G L++++ +
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL-----------DRGKALFDEVLE 275
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
D +TY+TLI F G L +A + M E + + I+GL T
Sbjct: 276 R--GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHD 393
EA + L +D P TY+ +I L KD GL A + +
Sbjct: 334 KEALQLLNLMIEKD--EEPNAVTYNIIINK-----------LCKD----GLVADAVEIVE 376
Query: 394 KMLHGNYKPEGAIYNLLIFDHCRHGNVHKA----YDMYKETVHSGVEI 437
M +P+ YN+L+ C G++ +A Y M K++ ++ ++
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 34/276 (12%)
Query: 35 VDKAHNMLKYMIVRGFS---PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDT 91
+D+A +L Y++++ S P V +YN LIHG C+ +R +A+ I + ++ + D T
Sbjct: 403 LDEASKLL-YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461
Query: 92 YYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML 151
L+ + G + KA E+ ++ I+ ++DTY +I C+ G L+ A L +M
Sbjct: 462 TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMR 521
Query: 152 REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD------------------ 193
+ P + Y L++ C +G +A L +EM PD
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK 581
Query: 194 ------------GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI 241
G+SP L Y+ I+ LG ++EA+ M D G PD +V+
Sbjct: 582 SAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Query: 242 KGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
K GE K EL ++ +K I L +++ +++D
Sbjct: 642 KYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMD 677
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ SL +D+A + + M P V ++N +I G +A K A +L M++ GL
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
SPD+ TY LI F + G L +A KMV G PDA ++ +G K +
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTE 655
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYC 170
L +++ + + K + +M+Y C
Sbjct: 656 LVKKLVDKDIVLDKELTCTVMDYMC 680
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 160/327 (48%), Gaps = 20/327 (6%)
Query: 10 NKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADR 69
NK ++D N L +H L ++D+A + K ++ RG +YN LI G C +
Sbjct: 498 NKGFVVDTRTSNAL--LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 70 FKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGI 129
EA L +M KRGL PD TY LICG K+ +A + G+LPD TY +
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
+I C+ R + + F EM+ + V P+ +Y L+ YC G S AL+L ++M +K
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK- 674
Query: 190 FLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
GISP+ Y + I G ++ RVEEA + M GL P+V YT +I G+ K+G+
Sbjct: 675 ----GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 250 PVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMS 309
VK L EM K + +++TY+ +I + GN+ +A L +EM
Sbjct: 731 MVKVECLLREMHSKNVH-------------PNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Query: 310 EYSYLTDDVISSVRINGLNKKATTIEA 336
E + D + I G K+ +EA
Sbjct: 778 EKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 193/451 (42%), Gaps = 85/451 (18%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
++ +G SP V + I+ +C+ + +EAV + M + G++P+V T+ +I G G+
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
+AF K KMV +G+ P TY IL+ L R R+ A+ + EM ++G P+ +Y
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
L++ + G +KA+++ D M++K G+S + YN I G C G+ + A +L+
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSK-----GLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Query: 225 MADMGLSPDVVSYTNV-----------------------------------IKGFCKIGE 249
M +G + + S+T+V I G CK G+
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 250 PVKAFELKLEMDEKGIPLYEDIYQSLLDDLS----------------------DEVTYST 287
KA EL + KG + +LL L D V+Y+T
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 288 LINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQD 347
LI+ + L +A+ EM + D+ S+ I GL EA + F+ D
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-----FWDD 600
Query: 348 CLS---IPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEG 404
C +P TY +I+ C E + + D+M+ N +P
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAE---------------RTEEGQEFFDEMMSKNVQPNT 645
Query: 405 AIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+YN LI +CR G + A ++ ++ H G+
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 147/359 (40%), Gaps = 52/359 (14%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q D A +LK M+ GF+ + ++ +I C F A+ + +M R +SP
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G C+ GK KA E+ + ++KG + D T L+ LC G+L +AF + E+L
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD-------------------- 193
G + Y L++ C K + +A DEM+ +G PD
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 194 ----------GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
G+ P + Y+ I GCC R EE M + P+ V Y ++I+
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 244 FCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS----------------------D 281
+C+ G A EL+ +M KGI Y SL+ +S +
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 282 EVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSL 340
Y+ LI+ + G ++ CL EM + + + +V I G + EA R L
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 5/241 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD + L N+ +V++A G P V TY+ +I G C+A+R +E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+M + + P+ Y LI +C++G+L A E++ M HKGI P++ TY LI +
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
R+ +A LF EM EG+ P+ + YT L++ Y G+ K L EM +K P+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
I+ Y I G G V EA +L M + G+ PD ++Y I G+ K G ++AF
Sbjct: 751 IT-----YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Query: 255 E 255
+
Sbjct: 806 K 806
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 142/320 (44%), Gaps = 36/320 (11%)
Query: 115 MVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
+ +KG+ P T IL+ +L R K + F +++ +GVSP Y++T +N +C G+
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 175 FSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
+A+ L +M G++P++V +N I G + GR +EA M + G+ P +
Sbjct: 276 VEEAVKLFSKMEEA-----GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHA 294
++Y+ ++KG + A+ + EM +KG P + + Y+ LI+ F
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFP-------------PNVIVYNNLIDSFIE 377
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
G+L A ++ M + I G K A+R L ++ LSI
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL-----KEMLSIGF- 431
Query: 355 RTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDH 414
N + F +V+ L+ M A + +ML N P G + LI
Sbjct: 432 --------NVNQGSFTSVICLLCSHLM---FDSALRFVGEMLLRNMSPGGGLLTTLISGL 480
Query: 415 CRHGNVHKAYDMYKETVHSG 434
C+HG KA +++ + ++ G
Sbjct: 481 CKHGKHSKALELWFQFLNKG 500
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 116/303 (38%), Gaps = 73/303 (24%)
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIY 202
A D+F + +G+ P K L+ EF K + D + G+SP + ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD------VVCKGVSPDVYLF 263
Query: 203 NARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
I+ C G+VEEA+ + M + G++P+VV++ VI G G +AF K +M E
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323
Query: 263 KGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSV 322
+G+ +TYS L+ + DAY + EM++ + + ++
Sbjct: 324 RGME-------------PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV--- 367
Query: 323 RINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMR 382
Y+ LI++ F
Sbjct: 368 ----------------------------------YNNLIDS---------------FIEA 378
Query: 383 GLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEP 442
G +KA + D M+ + YN LI +C++G A + KE + G + +
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG-- 436
Query: 443 SFT 445
SFT
Sbjct: 437 SFT 439
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK 107
+G SP+ ATY LI G R +EA + +M GL P+V Y LI G+ + G++ K
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 108 AFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
+ +M K + P+ TY ++I R G +++A L EM +G+ P Y +
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 168 YYCFKGEFSKALDLPDE 184
Y +G +A DE
Sbjct: 794 GYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 160/327 (48%), Gaps = 20/327 (6%)
Query: 10 NKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADR 69
NK ++D N L +H L ++D+A + K ++ RG +YN LI G C +
Sbjct: 498 NKGFVVDTRTSNAL--LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 70 FKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGI 129
EA L +M KRGL PD TY LICG K+ +A + G+LPD TY +
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
+I C+ R + + F EM+ + V P+ +Y L+ YC G S AL+L ++M +K
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK- 674
Query: 190 FLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
GISP+ Y + I G ++ RVEEA + M GL P+V YT +I G+ K+G+
Sbjct: 675 ----GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 250 PVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMS 309
VK L EM K + +++TY+ +I + GN+ +A L +EM
Sbjct: 731 MVKVECLLREMHSKNVH-------------PNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Query: 310 EYSYLTDDVISSVRINGLNKKATTIEA 336
E + D + I G K+ +EA
Sbjct: 778 EKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 193/451 (42%), Gaps = 85/451 (18%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
++ +G SP V + I+ +C+ + +EAV + M + G++P+V T+ +I G G+
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
+AF K KMV +G+ P TY IL+ L R R+ A+ + EM ++G P+ +Y
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
L++ + G +KA+++ D M++K G+S + YN I G C G+ + A +L+
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSK-----GLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Query: 225 MADMGLSPDVVSYTNV-----------------------------------IKGFCKIGE 249
M +G + + S+T+V I G CK G+
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 250 PVKAFELKLEMDEKGIPLYEDIYQSLLDDLS----------------------DEVTYST 287
KA EL + KG + +LL L D V+Y+T
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 288 LINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQD 347
LI+ + L +A+ EM + D+ S+ I GL EA + F+ D
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-----FWDD 600
Query: 348 CLS---IPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEG 404
C +P TY +I+ C E + + D+M+ N +P
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAE---------------RTEEGQEFFDEMMSKNVQPNT 645
Query: 405 AIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+YN LI +CR G + A ++ ++ H G+
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 147/359 (40%), Gaps = 52/359 (14%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q D A +LK M+ GF+ + ++ +I C F A+ + +M R +SP
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G C+ GK KA E+ + ++KG + D T L+ LC G+L +AF + E+L
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD-------------------- 193
G + Y L++ C K + +A DEM+ +G PD
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 194 ----------GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
G+ P + Y+ I GCC R EE M + P+ V Y ++I+
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 244 FCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS----------------------D 281
+C+ G A EL+ +M KGI Y SL+ +S +
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 282 EVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSL 340
Y+ LI+ + G ++ CL EM + + + +V I G + EA R L
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 5/241 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD + L N+ +V++A G P V TY+ +I G C+A+R +E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+M + + P+ Y LI +C++G+L A E++ M HKGI P++ TY LI +
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
R+ +A LF EM EG+ P+ + YT L++ Y G+ K L EM +K P+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
I+ Y I G G V EA +L M + G+ PD ++Y I G+ K G ++AF
Sbjct: 751 IT-----YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Query: 255 E 255
+
Sbjct: 806 K 806
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 142/320 (44%), Gaps = 36/320 (11%)
Query: 115 MVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
+ +KG+ P T IL+ +L R K + F +++ +GVSP Y++T +N +C G+
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 175 FSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
+A+ L +M G++P++V +N I G + GR +EA M + G+ P +
Sbjct: 276 VEEAVKLFSKMEEA-----GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHA 294
++Y+ ++KG + A+ + EM +KG P + + Y+ LI+ F
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFP-------------PNVIVYNNLIDSFIE 377
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
G+L A ++ M + I G K A+R L ++ LSI
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL-----KEMLSIGF- 431
Query: 355 RTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDH 414
N + F +V+ L+ M A + +ML N P G + LI
Sbjct: 432 --------NVNQGSFTSVICLLCSHLM---FDSALRFVGEMLLRNMSPGGGLLTTLISGL 480
Query: 415 CRHGNVHKAYDMYKETVHSG 434
C+HG KA +++ + ++ G
Sbjct: 481 CKHGKHSKALELWFQFLNKG 500
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 116/303 (38%), Gaps = 73/303 (24%)
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIY 202
A D+F + +G+ P K L+ EF K + D + G+SP + ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD------VVCKGVSPDVYLF 263
Query: 203 NARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
I+ C G+VEEA+ + M + G++P+VV++ VI G G +AF K +M E
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323
Query: 263 KGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSV 322
+G+ +TYS L+ + DAY + EM++ + + ++
Sbjct: 324 RGME-------------PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV--- 367
Query: 323 RINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMR 382
Y+ LI++ F
Sbjct: 368 ----------------------------------YNNLIDS---------------FIEA 378
Query: 383 GLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEP 442
G +KA + D M+ + YN LI +C++G A + KE + G + +
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG-- 436
Query: 443 SFT 445
SFT
Sbjct: 437 SFT 439
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK 107
+G SP+ ATY LI G R +EA + +M GL P+V Y LI G+ + G++ K
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 108 AFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
+ +M K + P+ TY ++I R G +++A L EM +G+ P Y +
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 168 YYCFKGEFSKALDLPDE 184
Y +G +A DE
Sbjct: 794 GYLKQGGVLEAFKGSDE 810
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 187/413 (45%), Gaps = 41/413 (9%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
M V G P V+T+N LI CRA + + A+ +L DM GL PD T+ ++ G+ + G
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML-REGVSPHKYIYT 163
L A ++ +MV G + +++ C++GR+ A + EM ++G P +Y +
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 164 RLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILR 223
L+N C G A+++ D M+ +G+ PD + YN+ I G C LG V+EA+ +L
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPD-----VYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 224 GMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEV 283
M SP+ V+Y +I CK + +A EL + KGI L D
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI-------------LPDVC 401
Query: 284 TYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRW 343
T+++LI N A L EM D+ ++ I+ L K EA L +
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 344 FYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHK--------------- 387
C + TY+TLI+ C N+ + + + + G++
Sbjct: 462 ELSGCAR--SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 388 ----AAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
AA+ D+M+ KP+ YN L+ CR G++ KA D+ + +G E
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 198/434 (45%), Gaps = 47/434 (10%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVR-GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
VH +V+ A N ++ M + GF P T+N L++G C+A K A+ I+ M + G
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
PDV TY +I G C+ G++ +A E+ +M+ + P+ TY LI TLC++ ++ +A
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385
Query: 145 DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
+L + +G+ P + L+ C A++L +EM +KG PD + YN
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT-----YNM 440
Query: 205 RIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
I C G+++EAL +L+ M G + V++Y +I GFCK + +A E+ EM+ G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 265 IPLYEDIYQSLLDDL----------------------SDEVTYSTLINDFHAQGNLMDAY 302
+ Y +L+D L D+ TY++L+ F G++ A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 303 CLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIE 362
+ M+ D V I+GL KA +E L+R +++ + Y+ +I+
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLC-KAGRVEVASKLLRSIQMKGINLTPH-AYNPVIQ 618
Query: 363 NCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAI-YNLLIFDHCRHGN-V 420
GL + + +A +ML N P A+ Y ++ C G +
Sbjct: 619 -----------GLFR----KRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Query: 421 HKAYDMYKETVHSG 434
+A D E + G
Sbjct: 664 REAVDFLVELLEKG 677
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 154/322 (47%), Gaps = 20/322 (6%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
DPD S + L + +V +A +L MI R SP+ TYN LI C+ ++ +EA
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+ R + +G+ PDV T+ LI G C T A E+ +M KG PD TY +LI +LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
KG+L +A ++ +M G + Y L++ +C + +A ++ DEM G+
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-----EVHGV 501
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
S + V YN I G C RVE+A ++ M G PD +Y +++ FC+ G+ KA +
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNL-MDAYCLESEMSEYSYL 314
+ M G D VTY TLI+ G + + + L S + L
Sbjct: 562 IVQAMTSNGCE-------------PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 315 TDDVISSVRINGLNKKATTIEA 336
T + V I GL +K T EA
Sbjct: 609 TPHAYNPV-IQGLFRKRKTTEA 629
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ L +V+ A ++ MI+ G P TYN L+ +CR K+A I++ M G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD+ TY LI G C+ G++ A ++ + KGI Y +I L RK + ++A +
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKG------EFSKALDLPDEMINKGFLPD 193
LF EML + +P + R++ F+G +A+D E++ KGF+P+
Sbjct: 632 LFREMLEQNEAPPDAVSYRIV----FRGLCNGGGPIREAVDFLVELLEKGFVPE 681
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 171/356 (48%), Gaps = 21/356 (5%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V A +L M RG +P V TYN L++G C+ R EA+ L DM G P+V T+
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
++ C TG+ A ++ A M+ KG P T+ ILI LCRKG L +A D+ +M + G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
P+ Y L++ +C + + +A++ + M+++G PD +V YN + C G+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD-----IVTYNTMLTALCKDGK 429
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
VE+A+ IL ++ G SP +++Y VI G K G+ KA +L EM K
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK----------- 478
Query: 275 LLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTI 334
D D +TYS+L+ +G + +A E + V + + GL K T
Sbjct: 479 --DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Query: 335 EAKRSLVRWFYQDCLSIPAYRTYDTLIENCS-NNEFKTVVGLVKDFSMRGLAHKAA 389
A LV + C P +Y LIE + K + L+ + +GL K++
Sbjct: 537 RAIDFLVFMINRGCK--PNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 198/450 (44%), Gaps = 46/450 (10%)
Query: 6 SCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYC 65
S N+ + D + N L Q ++ ++++ L+ M+ G P + LI G+C
Sbjct: 92 SSVNSSFALEDVESNNHLRQ---MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFC 148
Query: 66 RADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDAD 125
R + ++A IL + G PDV TY +I G+C+ G++ A + +M + PD
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVV 205
Query: 126 TYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEM 185
TY ++ +LC G+L +A ++ ML+ P YT L+ C A+ L DEM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 186 INKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFC 245
++G PD +V YN ++G C GR++EA+ L M G P+V+++ +++ C
Sbjct: 266 RDRGCTPD-----VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 246 KIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLE 305
G + A +L +M KG VT++ LIN +G L A +
Sbjct: 321 STGRWMDAEKLLADMLRKGFS-------------PSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 306 SEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-C 364
+M ++ + + + ++G K+ A L R + C P TY+T++ C
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY--PDIVTYNTMLTALC 425
Query: 365 SNNEFKTVVGLVKDFSMRGLA-------------------HKAAKAHDKMLHGNYKPEGA 405
+ + + V ++ S +G + KA K D+M + KP+
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Query: 406 IYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
Y+ L+ R G V +A + E G+
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 188/425 (44%), Gaps = 40/425 (9%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+++ A ++L M V SP V TYN ++ C + + K+A+ +L M +R PDV TY
Sbjct: 187 EINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI C+ +G A ++ +M +G PD TY +L+ +C++GRL +A +M
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G P+ + ++ C G + A L +M+ KGF SPS+V +N I+ C G
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF-----SPSVVTFNILINFLCRKG 358
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
+ A+ IL M G P+ +SY ++ GFCK + +A E M +G Y DI
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC--YPDI-- 414
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
VTY+T++ G + DA + +++S + + I+GL K T
Sbjct: 415 ---------VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHD 393
+A + L +D P TY + LV S G +A K
Sbjct: 466 GKAIKLLDEMRAKDLK--PDTITYSS---------------LVGGLSREGKVDEAIKFFH 508
Query: 394 KMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPSFTWPRPGLHF 453
+ +P +N ++ C+ +A D ++ G + E S+T GL +
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN--ETSYTILIEGLAY 566
Query: 454 FFVAQ 458
+A+
Sbjct: 567 EGMAK 571
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 5/205 (2%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H ++D+A L+ M+ RG P + TYN ++ C+ + ++AV IL ++ +G
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
SP + TY +I G + GK GKA ++ +M K + PD TY L+ L R+G++ +A
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
F E R G+ P+ + +M C + +A+D MIN+G P+ S Y
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS-----YTIL 560
Query: 206 IHGCCVLGRVEEALGILRGMADMGL 230
I G G +EAL +L + + GL
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 94/175 (53%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + + +L +V+ A +L + +G SP + TYN +I G +A + +A+ +
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L +M + L PD TY L+ G + GK+ +A + + GI P+A T+ ++L LC+
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL 191
+ +A D + M+ G P++ YT L+ ++G +AL+L +E+ NKG +
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
+A L PD S V L +VD+A G P+ T+N ++ G C++ +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGIL 121
A+ L M RG P+ +Y LI G G +A E+ ++ +KG++
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 214/437 (48%), Gaps = 33/437 (7%)
Query: 3 ITASCKNNKAVILDPD--ERNLLSQV---HSLLNVY----QVDKAHNMLKYMIVRGFSPS 53
+ + CK KA L E+ L+ V ++L+N Y ++ A ++++ M R SP+
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 54 VATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKA 113
TYNELI GYC+++ K A+G+L M +R + PDV TY LI G C++G A+ + +
Sbjct: 428 TRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 114 KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKG 173
M +G++PD TY +I +LC+ R+ +A DLF + ++GV+P+ +YT L++ YC G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 174 EFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPD 233
+ +A + ++M++K LP+ ++ +NA IHG C G+++EA + M +GL P
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLT-----FNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 234 VVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFH 293
V + T +I K G+ A+ +M G D TY+T I +
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK-------------PDAHTYTTFIQTYC 648
Query: 294 AQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPA 353
+G L+DA + ++M E D S I G T A L R C P+
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE--PS 706
Query: 354 YRTYDTLIENCSNNEFKTVVGLVKDF-SMRGLAH--KAAKAHDKMLHGNYKPEGAIYNLL 410
T+ +LI++ ++ G + +M + + +KM+ + P Y L
Sbjct: 707 QHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766
Query: 411 IFDHCRHGNVHKAYDMY 427
I C GN+ A ++
Sbjct: 767 ILGICEVGNLRVAEKVF 783
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 196/441 (44%), Gaps = 41/441 (9%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
LDPD S + +D A + M ++G + Y LIHG C A R EA+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ M P V TY LI C + + +A + +M GI P+ TY +LI +L
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C + + KA +L +ML +G+ P+ Y L+N YC +G A+D+ + M ++
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR-----K 423
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+SP+ YN I G C V +A+G+L M + + PDVV+Y ++I G C+ G A+
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
L M+++G+ + D+ TY+++I+ + +A L + +
Sbjct: 483 RLLSLMNDRGL-------------VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 315 TDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVV 373
+ V+ + I+G K EA L + ++CL P T++ LI C++ + K
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL--PNSLTFNALIHGLCADGKLKEAT 587
Query: 374 GLVKDFSMRGLA----------HKAAKAHD---------KMLHGNYKPEGAIYNLLIFDH 414
L + GL H+ K D +ML KP+ Y I +
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 415 CRHGNVHKAYDMYKETVHSGV 435
CR G + A DM + +GV
Sbjct: 648 CREGRLLDAEDMMAKMRENGV 668
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 139/353 (39%), Gaps = 98/353 (27%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSP------ 87
+VD+AH ML+ M+ + P+ T+N LIHG C + KEA + M K GL P
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 88 -----------------------------DVDTYYPLICGFCQTGKLGKAFEMKAKMVHK 118
D TY I +C+ G+L A +M AKM
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRL------MNYYCFK 172
G+ PD TY LI G+ + AFD+ M G P ++ + L M Y K
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 173 G------------EFSKALDLPDEMINKGFLP---------------------------- 192
G EF ++L ++M+ P
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 193 ---DGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
+GISPS +++NA + CC L + EA ++ M +G P + S +I G K GE
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846
Query: 250 PVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAY 302
E+G +++++ Q DE+ + +I+ QG L++A+
Sbjct: 847 -----------KERGTSVFQNLLQC--GYYEDELAWKIIIDGVGKQG-LVEAF 885
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 151/381 (39%), Gaps = 62/381 (16%)
Query: 89 VDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFL 148
V +Y L+ G +G F+++ M+ D+ + +L LCRK + F+L
Sbjct: 123 VYSYASLLTLLINNGYVGVVFKIRLLMIKSC---DSVGDALYVLDLCRKMNKDERFELKY 179
Query: 149 EMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEM--INKGFLPDGISPSLVIYNARI 206
+++ Y L+N G L DEM + L D + P++ YN +
Sbjct: 180 KLIIG-------CYNTLLNSLARFG-------LVDEMKQVYMEMLEDKVCPNIYTYNKMV 225
Query: 207 HGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIP 266
+G C LG VEEA + + + GL PD +YT++I G+C+ + AF++ EM KG
Sbjct: 226 NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR 285
Query: 267 LYEDIYQSLLDDLS-----DEV-----------------TYSTLINDFHAQGNLMDAYCL 304
E Y L+ L DE TY+ LI +A L
Sbjct: 286 RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNL 345
Query: 305 ESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN- 363
EM E + +V I+ L + E R L+ + L +P TY+ LI
Sbjct: 346 VKEMEETGIKPNIHTYTVLIDSLCSQC-KFEKARELLGQMLEKGL-MPNVITYNALINGY 403
Query: 364 CSNNEFKTVVGLVKDFSMRGLA------------------HKAAKAHDKMLHGNYKPEGA 405
C + V +V+ R L+ HKA +KML P+
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVV 463
Query: 406 IYNLLIFDHCRHGNVHKAYDM 426
YN LI CR GN AY +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRL 484
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 197/435 (45%), Gaps = 65/435 (14%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+D A+N++K MI G P+V Y LI + + RF +A+ +L++M ++G++PD+ Y
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI G + ++ +A +MV G+ P+A TYG I + A EM G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD--------------------- 193
V P+K + T L+N YC KG+ +A M+++G L D
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 194 ---------GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGF 244
GI+P + Y I+G LG +++A I M + GL+P+V+ Y ++ GF
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 245 CKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCL 304
C+ GE KA EL EM KG+ + VTY T+I+ + G+L +A+ L
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLH-------------PNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 305 ESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENC 364
EM + D + + ++G + +E ++ + C S
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCC-RLNDVERAITIFGTNKKGCAS-------------- 764
Query: 365 SNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNY----KPEGAIYNLLIFDHCRHGNV 420
S F ++ V F G + ++++ G++ KP YN++I C+ GN+
Sbjct: 765 STAPFNALINWVFKF---GKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 421 HKAYDMYKETVHSGV 435
A +++ + ++ +
Sbjct: 822 EAAKELFHQMQNANL 836
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 185/426 (43%), Gaps = 58/426 (13%)
Query: 29 LLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
L+N Y +V +A + + M+ +G TY L++G + D+ +A I R+M +G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
++PDV +Y LI GF + G + KA + +MV +G+ P+ Y +L+ CR G + KA
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 145 DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
+L EM +G+ P+ Y +++ YC G+ ++A L DEM KG +PD +Y
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF-----VYTT 737
Query: 205 RIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM---- 260
+ GCC L VE A+ I G G + + +I K G+ ELK E+
Sbjct: 738 LVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKT----ELKTEVLNRL 792
Query: 261 -----DEKGIPLYEDIYQSLLDDLSDE----------------------VTYSTLINDFH 293
D G P + Y ++D L E +TY++L+N +
Sbjct: 793 MDGSFDRFGKP-NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 294 AQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPA 353
G + + + E D ++ SV IN K+ T +A + + F ++
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA----- 906
Query: 354 YRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFD 413
+++ T L+ F+ G A K + M+ Y P+ A LI +
Sbjct: 907 -------VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINE 959
Query: 414 HCRHGN 419
C N
Sbjct: 960 SCISSN 965
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 180/457 (39%), Gaps = 75/457 (16%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
VD A + + MI +G P TY+ LI G C+ R ++A +L +M G+S D TY
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 94 PLI--------------------------------CGFCQTGKLGKAFEMKA---KMVHK 118
LI C C K G + KA M+
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
G++P A Y LI CR+ + + ++L +EM + + Y Y ++ C G+ A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYT 238
++ EMI G P++VIY I R +A+ +L+ M + G++PD+ Y
Sbjct: 437 YNIVKEMI-----ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 239 NVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNL 298
++I G K +A +EM E G+ + TY I+ +
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLK-------------PNAFTYGAFISGYIEASEF 538
Query: 299 MDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYD 358
A EM E L + V+ + IN KK IEA + Q L +TY
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG--DAKTYT 596
Query: 359 TLIENCSNNE--------FKTVVG------------LVKDFSMRGLAHKAAKAHDKMLHG 398
L+ N+ F+ + G L+ FS G KA+ D+M+
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 399 NYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
P IYN+L+ CR G + KA ++ E G+
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 200/433 (46%), Gaps = 44/433 (10%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
++ L Q+ A +L M+ G+ PS+ T N L++G+C +R EAV ++ M + G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD T+ L+ G Q K +A + +MV KG PD TYG +I LC++G A +
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
L +M + + IY+ +++ C AL+L EM NKG PD + Y++
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD-----VFTYSSL 281
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
I C GR +A +L M + ++P+VV++ ++I F K G+ ++A +L EM ++ I
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 266 PLYEDIYQSLL----------------------DDLSDEVTYSTLINDFHAQGNLMDAYC 303
Y SL+ D L D VTY+TLIN F ++D
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 304 LESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN 363
L +MS + + V + I+G +A+ + + + + D + P TY+TL++
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFF-QASDCDNAQMVFKQMVSDGVH-PNIMTYNTLLD- 458
Query: 364 CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKA 423
GL K+ G KA + + +P+ YN++ C+ G V
Sbjct: 459 ----------GLCKN----GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 424 YDMYKETVHSGVE 436
+D++ GV+
Sbjct: 505 WDLFCSLSLKGVK 517
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 193/433 (44%), Gaps = 40/433 (9%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + VH L + +A +++ M+V+G P + TY +I+G C+ A+ +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L M K + DV Y +I C+ + A + +M +KGI PD TY LI LC
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
GR S A L +ML ++P+ + L++ + +G+ +A L DEMI + I
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-----SID 342
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P++V YN+ I+G C+ R++EA I M PDVV+Y +I GFCK + V EL
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
+M +G+ + + VTY+TLI+ F + +A + +M +
Sbjct: 403 FRDMSRRGL-------------VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 317 DVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFK----- 370
+ + ++GL K K +V + Q P TY+ + E C + +
Sbjct: 450 IMTYNTLLDGLCKNGKL--EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 371 -----------TVVG---LVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCR 416
V+ ++ F +GL +A KM P+ YN LI H R
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Query: 417 HGNVHKAYDMYKE 429
G+ + ++ KE
Sbjct: 568 DGDKAASAELIKE 580
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 187/412 (45%), Gaps = 40/412 (9%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
M + G S ++ TYN +I+ CR + A+ IL M K G P + T L+ GFC +
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 150
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
+ +A + +MV G PD T+ L+ L + + S+A L M+ +G P Y
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
++N C +GE AL+L ++M KG I +VIY+ I C V++AL +
Sbjct: 211 VINGLCKRGEPDLALNLLNKM-EKG----KIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT 284
M + G+ PDV +Y+++I C G A L +M E+ I + VT
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN-------------PNVVT 312
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWF 344
+++LI+ F +G L++A L EM + S + V + ING EA++
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 345 YQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLA----------HKAAKAHD 393
+DCL P TY+TLI C + + L +D S RGL H +A D
Sbjct: 373 SKDCL--PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 394 ---------KMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
+M+ P YN L+ C++G + KA +++ S +E
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 139/302 (46%), Gaps = 18/302 (5%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++P+ S + + ++ +A + MI R P++ TYN LI+G+C DR EA
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
I M + PDV TY LI GFC+ K+ E+ M +G++ + TY LI
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ A +F +M+ +GV P+ Y L++ C G+ KA+ ++ +
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM-----VVFEYLQKSK 480
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ P + YN G C G+VE+ + ++ G+ PDV++Y +I GFCK G +A+
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
L ++M E G L D TY+TLI G+ + L EM +
Sbjct: 541 TLFIKMKEDG-------------PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFA 587
Query: 315 TD 316
D
Sbjct: 588 GD 589
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 12/211 (5%)
Query: 2 MITASCKNNKAV-----ILDPDERNLLSQ-------VHSLLNVYQVDKAHNMLKYMIVRG 49
+I CK K V D R L+ +H D A + K M+ G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
P++ TYN L+ G C+ + ++A+ + + K + PD+ TY + G C+ GK+ +
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
++ + KG+ PD Y +I C+KG +A+ LF++M +G P Y L+ +
Sbjct: 506 DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
G+ + + +L EM + F D + LV
Sbjct: 566 LRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 193/419 (46%), Gaps = 37/419 (8%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + +H L + +A ++ M+ RG P + TY +++G C+ A+ +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L+ M K + DV Y +I G C+ + A + +M +KGI PD TY LI LC
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
GR S A L +M+ ++P+ ++ L++ + +G+ +A L DEMI + I
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-----SID 360
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P + Y++ I+G C+ R++EA + M P+VV+Y+ +IKGFCK + EL
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
EM ++G+ + + VTY+TLI+ F + +A + +M +
Sbjct: 421 FREMSQRGL-------------VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 317 DVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGL 375
+ ++ ++GL K AK +V + Q P TY+ +IE C + + L
Sbjct: 468 ILTYNILLDGLCKNGKL--AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 376 VKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
+ S++G++ P YN +I CR G+ +A + K+ G
Sbjct: 526 FCNLSLKGVS----------------PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 202/462 (43%), Gaps = 53/462 (11%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D R +L + L ++ +VD A ++ M+ PS+ +N+L+ + ++F+ + +
Sbjct: 49 DYREILR--NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG 106
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
M G+S D+ TY I FC+ +L A + AKM+ G PD T L+ C
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
R+S A L +M+ G P + +T L++ + S+A+ L D+M+ +G PD
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD---- 222
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELK 257
LV Y ++G C G ++ AL +L+ M + DVV Y +I G CK A L
Sbjct: 223 -LVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 258 LEMDEKGIPLYEDIYQSLLDDL------SDE----------------VTYSTLINDFHAQ 295
EMD KGI Y SL+ L SD VT+S LI+ F +
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 296 GNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYR 355
G L++A L EM + S D S ING EAK +DC P
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVV 399
Query: 356 TYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYK------------- 401
TY TLI+ C + + L ++ S RGL + ++HG ++
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 402 -------PEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
P YN+L+ C++G + KA +++ S +E
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 188/422 (44%), Gaps = 40/422 (9%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q+ A +L M+ G+ P + T + L++GYC + R +AV ++ M + G PD T+
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G K +A + +MV +G PD TYG ++ LC++G + A L +M +
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
+ IY +++ C AL+L EM NKG PD + Y++ I C G
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD-----VFTYSSLISCLCNYG 307
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
R +A +L M + ++P+VV+++ +I F K G+ V+A +L EM ++ I DI+
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIF- 364
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
TYS+LIN F L +A + M + V S I G KA
Sbjct: 365 ----------TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC-KAKR 413
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLI------ENCSNNE--FKTVVG----------- 374
+E L R Q L + TY TLI +C N + FK +V
Sbjct: 414 VEEGMELFREMSQRGL-VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 375 -LVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHS 433
L+ G KA + + +P+ YN++I C+ G V ++++
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 434 GV 435
GV
Sbjct: 533 GV 534
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 130/250 (52%), Gaps = 5/250 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DPD S ++ ++D+A +M + MI + P+V TY+ LI G+C+A R +E +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ R+M++RGL + TY LI GF Q A + +MV G+ P+ TY IL+ L
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C+ G+L+KA +F + R + P Y Y ++ C G+ +L + K G
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-----G 533
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+SP+++ YN I G C G EEA +L+ M + G P+ +Y +I+ + G+ +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 255 ELKLEMDEKG 264
EL EM G
Sbjct: 594 ELIKEMRSCG 603
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 142/292 (48%), Gaps = 12/292 (4%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++P+ + + + + ++ +A + MI R P + TY+ LI+G+C DR EA
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ M + P+V TY LI GFC+ ++ + E+ +M +G++ + TY LI
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ A +F +M+ GV P+ Y L++ C G+ +KA+ + + + PD
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD- 502
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ YN I G C G+VE+ + ++ G+SP+V++Y +I GFC+ G +A
Sbjct: 503 ----IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 255 ELKLEMDEKGIPL-----YEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDA 301
L +M E G PL Y + ++ L D D + LI + + G DA
Sbjct: 559 SLLKKMKEDG-PLPNSGTYNTLIRARLRD-GDREASAELIKEMRSCGFAGDA 608
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H D A + K M+ G P++ TYN L+ G C+ + +A+ + + + +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD+ TY +I G C+ GK+ +E+ + KG+ P+ Y +I CRKG +A
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
L +M +G P+ Y L+ G+ + +L EM + GF D + LV
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++PD + + +V+ + + ++G SP+V YN +I G+CR +EA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L+ M + G P+ TY LI + G + E+ +M G DA T G L+ +
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNM 617
Query: 135 CRKGRLSKAFDLFLEML 151
GRL K+ FL+ML
Sbjct: 618 LHDGRLDKS---FLDML 631
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 198/420 (47%), Gaps = 40/420 (9%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + L ++++A M+ M++RGF+P TY L++G C+ R A
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA--- 341
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK-GILPDADTYGILILTLC 135
+D+ R P++ + LI GF G+L A + + MV GI+PD TY LI
Sbjct: 342 -KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
++G + A ++ +M +G P+ Y YT L++ +C G+ +A ++ +EM DG+
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS-----ADGL 455
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
P+ V +N I C R+ EA+ I R M G PDV ++ ++I G C++ E A
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLT 315
L +M +G+ +++ VTY+TLIN F +G + +A L +EM
Sbjct: 516 LLRDMISEGV-------------VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 316 DDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGL 375
D++ + I GL +A ++ RSL +D + P+ + + LI GL
Sbjct: 563 DEITYNSLIKGLC-RAGEVDKARSLFEKMLRDGHA-PSNISCNILIN-----------GL 609
Query: 376 VKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+ G+ +A + +M+ P+ +N LI CR G + M+++ G+
Sbjct: 610 CRS----GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 190/426 (44%), Gaps = 49/426 (11%)
Query: 32 VYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDT 91
V ++D A ++L+ M G P+ Y LIH + +R EA+ +L +M G PD +T
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 92 YYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML 151
+ +I G C+ ++ +A +M +M+ +G PD TYG L+ LC+ GR+ A DLF +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 152 REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCV 211
+ P I+ L++ + G A + +M+ GI P + YN+ I+G
Sbjct: 350 K----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY----GIVPDVCTYNSLIYGYWK 401
Query: 212 LGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDI 271
G V AL +L M + G P+V SYT ++ GFCK+G+ +A+ + EM G+
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK----- 456
Query: 272 YQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKA 331
+ V ++ LI+ F + + +A + EM D + I+GL
Sbjct: 457 --------PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL---C 505
Query: 332 TTIEAKRSLVRWFYQDCLS---IPAYRTYDTLIEN-CSNNEFK----------------- 370
E K +L W +D +S + TY+TLI E K
Sbjct: 506 EVDEIKHAL--WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 371 --TVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYK 428
T L+K G KA +KML + P N+LI CR G V +A + K
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 429 ETVHSG 434
E V G
Sbjct: 624 EMVLRG 629
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 148/299 (49%), Gaps = 18/299 (6%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++D+A+N+L M G P+ +N LI +C+ R EAV I R+M ++G PDV T+
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G C+ ++ A + M+ +G++ + TY LI R+G + +A L EM+ +
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G + Y L+ C GE KA L ++M L DG +PS + N I+G C G
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKM-----LRDGHAPSNISCNILINGLCRSG 613
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
VEEA+ + M G +PD+V++ ++I G C+ G + ++ +GIP
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP------- 666
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKAT 332
D VT++TL++ G + DA L E E ++ + S+ + + + T
Sbjct: 667 ------PDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQET 719
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 122/234 (52%), Gaps = 5/234 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L P+ + + +++ +A + + M +G P V T+N LI G C D K A+
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+LRDM G+ + TY LI F + G++ +A ++ +MV +G D TY LI L
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
CR G + KA LF +MLR+G +P L+N C G +A++ EM+ +G PD
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD- 633
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
+V +N+ I+G C GR+E+ L + R + G+ PD V++ ++ CK G
Sbjct: 634 ----IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 184/441 (41%), Gaps = 62/441 (14%)
Query: 41 MLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFC 100
ML+ V P+ +YN ++ + K A + DM R + P + T+ ++ FC
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 101 QTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKY 160
++ A + M G +P++ Y LI +L + R+++A L EM G P
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 161 IYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS------------------------ 196
+ ++ C ++A + + M+ +GF PD I+
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 197 --PSLVIYNARIHGCCVLGRVEEALGILRGM-ADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
P +VI+N IHG GR+++A +L M G+ PDV +Y ++I G+ K G A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
E+ +M KG ++Y +Y+ L++ F G + +AY + +EMS
Sbjct: 409 LEVLHDMRNKGCK--PNVY-----------SYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 314 LTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTV 372
+ V + I+ K+ EA + C P T+++LI C +E K
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK--PDVYTFNSLISGLCEVDEIKHA 513
Query: 373 VGLVKD-------------------FSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFD 413
+ L++D F RG +A K ++M+ + YN LI
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 414 HCRHGNVHKAYDMYKETVHSG 434
CR G V KA ++++ + G
Sbjct: 574 LCRAGEVDKARSLFEKMLRDG 594
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 127/322 (39%), Gaps = 73/322 (22%)
Query: 115 MVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
M+ + I P T+G+++ C + A L +M + G P+ IY L++
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 175 FSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
++AL L +EM G +PD + +N I G C R+ EA ++ M G +PD
Sbjct: 268 VNEALQLLEEMFLMGCVPDAET-----FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDD 322
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHA 294
++Y ++ G CKIG A +L + + I V ++TLI+ F
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI-----------------VIFNTLIHGFVT 365
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
G L DA + S+M ++S I +P
Sbjct: 366 HGRLDDAKAVLSDM----------VTSYGI--------------------------VPDV 389
Query: 355 RTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDH 414
TY++LI G K+ GL A + M + KP Y +L+
Sbjct: 390 CTYNSLI-----------YGYWKE----GLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 415 CRHGNVHKAYDMYKETVHSGVE 436
C+ G + +AY++ E G++
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLK 456
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 63/117 (53%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
++ L V++A K M++RG +P + T+N LI+G CRA R ++ + + R + G+
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
PD T+ L+ C+ G + A + + + G +P+ T+ IL+ ++ + L +
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 189/407 (46%), Gaps = 43/407 (10%)
Query: 33 YQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTY 92
+QV A ++L M+ G+ P T L++G+CR +R +AV ++ M + G PD+ Y
Sbjct: 134 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193
Query: 93 YPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLR 152
+I C+T ++ AF+ ++ KGI P+ TY L+ LC R S A L +M++
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 153 EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVL 212
+ ++P+ Y+ L++ + G+ +A +L +EM+ I P +V Y++ I+G C+
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM-----SIDPDIVTYSSLINGLCLH 308
Query: 213 GRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIY 272
R++EA + M G DVVSY +I GFCK +L EM ++G+
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL------- 361
Query: 273 QSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKAT 332
+S+ VTY+TLI F G++ A S+M + D ++ + GL
Sbjct: 362 ------VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG- 414
Query: 333 TIEAKRSLVRWFYQDCLSIPA---YRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKA 388
E +++LV ++D TY T+I C + + L S++GL
Sbjct: 415 --ELEKALV--IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL---- 466
Query: 389 AKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
KP+ Y ++ C G +H+ +Y + G+
Sbjct: 467 ------------KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 163/340 (47%), Gaps = 31/340 (9%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD + S V+ +V A +++ M+ G+ P + YN +I C+ R +A
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+++ ++G+ P+V TY L+ G C + + A + + M+ K I P+ TY L+
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
+ G++ +A +LF EM+R + P Y+ L+N C +A + D M++KG L D +
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
S YN I+G C RVE+ + + R M+ GL + V+Y +I+GF + G+ KA E
Sbjct: 332 S-----YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 256 LKLEMD------------------------EKGIPLYEDIYQSLLDDLSDEVTYSTLIND 291
+MD EK + ++ED+ + +D D VTY+T+I
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD--LDIVTYTTVIRG 444
Query: 292 FHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKA 331
G + +A+ L +S D V + ++GL K
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 182/412 (44%), Gaps = 37/412 (8%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D R LS+ L +++ A ++ M+ PS+ +N L+ + ++ + +
Sbjct: 51 DLRERLSKTR--LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLG 108
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
+ M G+ D+ T+ +I FC ++ A + KM+ G PD T G L+ CR+
Sbjct: 109 KKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR 168
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
R+S A L +M+ G P Y +++ C + A D E+ K GI P
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-----GIRP 223
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELK 257
++V Y A ++G C R +A +L M ++P+V++Y+ ++ F K G+ ++A E
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE-- 281
Query: 258 LEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDD 317
L+E++ + +D D VTYS+LIN + +A + M L D
Sbjct: 282 ---------LFEEMVRMSID--PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 318 VISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVK 377
V + ING KA +E L R Q L + TY+TLI+
Sbjct: 331 VSYNTLINGFC-KAKRVEDGMKLFREMSQRGL-VSNTVTYNTLIQG-------------- 374
Query: 378 DFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKE 429
F G KA + +M P+ YN+L+ C +G + KA ++++
Sbjct: 375 -FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 109/216 (50%), Gaps = 5/216 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DPD S ++ L ++D+A+ M M+ +G V +YN LI+G+C+A R ++ +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ R+M++RGL + TY LI GF Q G + KA E ++M GI PD TY IL+ L
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C G L KA +F +M + + YT ++ C G+ +A L + KG PD
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD- 469
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
+V Y + G C G + E + M GL
Sbjct: 470 ----IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
++ +V+ + + M RG + TYN LI G+ +A +A M G+
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
SPD+ TY L+ G C G+L KA + M + + D TY +I +C+ G++ +A+
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPS 198
LF + +G+ P YT +M+ C KG + L +M +G + + + S
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 196/425 (46%), Gaps = 44/425 (10%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q+ A +L M+ G+ P + T N L++G+C +R +AV ++ M + G PD T+
Sbjct: 131 QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFN 190
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G + + +A + +MV KG PD TYGI++ LC++G + A L +M +
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG 250
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
+ P IY +++ C + AL+L EM NK GI P++V YN+ I C G
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK-----GIRPNVVTYNSLIRCLCNYG 305
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
R +A +L M + ++P+VV+++ +I F K G+ V+A +L EM ++ I Y
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 274 SLLD-----DLSDE-----------------VTYSTLINDFHAQGNLMDAYCLESEMSEY 311
SL++ D DE VTY+TLI F + + L EMS+
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 312 SYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKT 371
+ + V + I+G +A + + + + D + +P TY L++ NN
Sbjct: 426 GLVGNTVTYTTLIHGF-FQARECDNAQIVFKQMVSDGV-LPDIMTYSILLDGLCNN---- 479
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETV 431
G A + + +P+ YN++I C+ G V +D++
Sbjct: 480 -----------GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 432 HSGVE 436
GV+
Sbjct: 529 LKGVK 533
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 182/409 (44%), Gaps = 42/409 (10%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G S ++ TY+ LI+ +CR + A+ +L M K G PD+ T L+ GFC ++ A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ +MV G PD+ T+ LI L R R S+A L M+ +G P Y ++N
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
C +G+ AL L +M +G I P +VIYN I C V +AL + M +
Sbjct: 231 LCKRGDIDLALSLLKKM-EQG----KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
G+ P+VV+Y ++I+ C G A L +M E+ I + VT+S L
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN-------------PNVVTFSAL 332
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDC 348
I+ F +G L++A L EM + S D S ING EAK +DC
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 349 LSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYK------ 401
P TY+TLI+ C + L ++ S RGL + ++HG ++
Sbjct: 393 F--PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARECDN 449
Query: 402 --------------PEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
P+ Y++L+ C +G V A +++ S +E
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 191/422 (45%), Gaps = 43/422 (10%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + +H L + +A ++ M+V+G P + TY +++G C+ A+ +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L+ M + + P V Y +I C + A + +M +KGI P+ TY LI LC
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
GR S A L +M+ ++P+ ++ L++ + +G+ +A L DEMI + I
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-----ID 358
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P + Y++ I+G C+ R++EA + M P+VV+Y +IKGFCK + EL
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
EM ++G+ + + VTY+TLI+ F +A + +M L D
Sbjct: 419 FREMSQRGL-------------VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 317 DVISSVRINGL--NKKATTIEAKRSLVRWFY-QDCLSIPAYRTYDTLIEN-CSNNEFKTV 372
+ S+ ++GL N K T +LV + Y Q P TY+ +IE C + +
Sbjct: 466 IMTYSILLDGLCNNGKVET-----ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 373 VGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVH 432
L S++G+ KP Y ++ CR G +A +++E
Sbjct: 521 WDLFCSLSLKGV----------------KPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 433 SG 434
G
Sbjct: 565 EG 566
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 198/467 (42%), Gaps = 71/467 (15%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD L S ++ + ++ A +++ M+ G+ P T+N LIHG R +R EAV
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
++ M +G PD+ TY ++ G C+ G + A + KM I P Y +I LC
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD-- 193
++ A +LF EM +G+ P+ Y L+ C G +S A L +MI + P+
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 194 ----------------------------GISPSLVIYNARIHGCCVLGRVEEALGILRGM 225
I P + Y++ I+G C+ R++EA + M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 226 ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTY 285
P+VV+Y +IKGFCK + EL EM ++G+ + + VTY
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL-------------VGNTVTY 434
Query: 286 STLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGL--NKKATTIEAKRSLVRW 343
+TLI+ F +A + +M L D + S+ ++GL N K T +LV +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET-----ALVVF 489
Query: 344 FY-QDCLSIPAYRTYDTLIEN-CSNNEFK-------------------TVVGLVKDFSMR 382
Y Q P TY+ +IE C + + T ++ F +
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 383 GLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKE 429
GL +A +M P+ YN LI H R G+ + ++ +E
Sbjct: 550 GLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 124/246 (50%), Gaps = 5/246 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DPD S ++ ++D+A +M + MI + P+V TYN LI G+C+A R E +
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ R+M++RGL + TY LI GF Q + A + +MV G+LPD TY IL+ L
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C G++ A +F + R + P Y Y ++ C G+ DL + K G
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-----G 531
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ P++V Y + G C G EEA + R M + G PD +Y +I+ + G+ +
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Query: 255 ELKLEM 260
EL EM
Sbjct: 592 ELIREM 597
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 176/424 (41%), Gaps = 29/424 (6%)
Query: 47 VRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLG 106
VR FS Y ++ + +AV + DM K P + + L+ + K
Sbjct: 39 VRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD 98
Query: 107 KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLM 166
+ +M + GI + TY ILI CR+ +LS A + +M++ G P L+
Sbjct: 99 LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLL 158
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA 226
N +C S A+ L +M+ G+ PD + +N IHG R EA+ ++ M
Sbjct: 159 NGFCHGNRISDAVSLVGQMVEMGYQPDSFT-----FNTLIHGLFRHNRASEAVALVDRMV 213
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYS 286
G PD+V+Y V+ G CK G+ A L +M++ I IY +++D L + +
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273
Query: 287 TLINDFHAQGN------------LMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTI 334
+N F N L+ C S+ S L D+I +N T
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE----RKINPNVVTF 329
Query: 335 EAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDK 394
A L+ F ++ + A + YD +I+ + + T L+ F M +A +
Sbjct: 330 SA---LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 395 MLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPSFTWPRPGLHFF 454
M+ + P YN LI C+ V + ++++E G+ +G T +H F
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL-VGNTVTYTTL----IHGF 441
Query: 455 FVAQ 458
F A+
Sbjct: 442 FQAR 445
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 142/302 (47%), Gaps = 18/302 (5%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++P+ + + + + ++ +A + MI R P + TY+ LI+G+C DR EA
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ M + P+V TY LI GFC+ ++ + E+ +M +G++ + TY LI
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ A +F +M+ +GV P Y+ L++ C G+ AL + + + PD
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD- 500
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ YN I G C G+VE+ + ++ G+ P+VV+YT ++ GFC+ G +A
Sbjct: 501 ----IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
L EM E+G L D TY+TLI G+ + L EM ++
Sbjct: 557 ALFREMKEEG-------------PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 603
Query: 315 TD 316
D
Sbjct: 604 GD 605
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H + D A + K M+ G P + TY+ L+ G C + + A+ + + + +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD+ TY +I G C+ GK+ +++ + KG+ P+ TY ++ CRKG +A
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
LF EM EG P Y L+ + G+ + + +L EM + F+ D + LV
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 612
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++PD + + +V+ ++ + ++G P+V TY ++ G+CR +EA
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ R+M + G PD TY LI + G + E+ +M + DA T G L+ +
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNM 615
Query: 135 CRKGRLSKAFDLFLEML 151
GRL K+ FL+ML
Sbjct: 616 LHDGRLDKS---FLKML 629
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 159/336 (47%), Gaps = 28/336 (8%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD + S ++ +V A +++ M GF P V YN +I G C+ +AV
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+ M + G+ D TY L+ G C +G+ A + MV + I+P+ T+ +I
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
++G+ S+A L+ EM R V P + Y L+N C G +A + D M+ KG LPD
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD-- 313
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
+V YN I+G C RV+E + R MA GL D ++Y +I+G+ + G P A E
Sbjct: 314 ---VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 256 LKLEMD---------------------EKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHA 294
+ MD EK + L+E++ +S ++ D TY+ +I+
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE--LDITTYNIVIHGMCK 428
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKK 330
GN+ DA+ L +S D V + I+G +K
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 175/399 (43%), Gaps = 73/399 (18%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A +++ M+ G+ P V T + LI+G+C+ +R +A+ ++ M + G PDV Y +I
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
G C+ G + A E+ +M G+ DA TY L+ LC GR S A L +M+ + P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+ +T +++ + +G+FS+A+ L +EM + + P + YN+ I+G C+ GRV+E
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRR-----CVDPDVFTYNSLINGLCMHGRVDE 297
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
A +L M G PDVV+Y +I GFCK + +L EM ++G+
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL------------ 345
Query: 278 DLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAK 337
+ D +TY+T+I + G A + S M
Sbjct: 346 -VGDTITYNTIIQGYFQAGRPDAAQEIFSRMD---------------------------- 376
Query: 338 RSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLH 397
S P RTY L+ M KA + M
Sbjct: 377 ------------SRPNIRTYSILLYG---------------LCMNWRVEKALVLFENMQK 409
Query: 398 GNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
+ + YN++I C+ GNV A+D+++ G++
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 8/218 (3%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DPD S ++ L +VD+A ML M+ +G P V TYN LI+G+C++ R E
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ R+MA+RGL D TY +I G+ Q G+ A E+ ++M + P+ TY IL+ L
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGL 391
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C R+ KA LF M + + Y +++ C G A DL + KG PD
Sbjct: 392 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
+S Y I G C + +++ + R M + GL P
Sbjct: 452 VS-----YTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 152/372 (40%), Gaps = 46/372 (12%)
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
L + ++ KM+ LP + ++ + + LF M G+ Y Y
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
++N C F AL + +M+ G+ PD ++ S + I+G C RV +A+ ++
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVS-----SLINGFCQGNRVFDAIDLVSK 164
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL-------- 276
M +MG PDVV Y +I G CKIG A EL M+ G+ Y SL+
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 277 --------------DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSV 322
D + + +T++ +I+ F +G +A L EM+ D +
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 323 RINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSM 381
INGL EAK+ L + CL P TY+TLI C + L ++ +
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCL--PDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 382 RGL----------------AHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYD 425
RGL A + A + + +P Y++L++ C + V KA
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALV 402
Query: 426 MYKETVHSGVEI 437
+++ S +E+
Sbjct: 403 LFENMQKSEIEL 414
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 178/404 (44%), Gaps = 70/404 (17%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+D A N+ M ++GF + Y LI G+C A R+ + +LRDM KR ++PDV +
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI F + GKL +A E+ +M+ +GI PD TY LI C++ +L KA + M+ +
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G P+ + L+N YC L+L +M +G + D ++ YN I G C LG
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT-----YNTLIQGFCELG 436
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
++E A + + M + PD+VSY ++ G C GEP KA E+ +E I +
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI-----------FEKIEK 485
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
S ++ D Y+ +I+ + DA+ D+ S+ + G+
Sbjct: 486 SKME--LDIGIYNIIIHGMCNASKVDDAW--------------DLFCSLPLKGVK----- 524
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHD 393
P +TY+ +I GL K +G +A
Sbjct: 525 ------------------PDVKTYNIMIG-----------GLCK----KGSLSEADLLFR 551
Query: 394 KMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
KM + P G YN+LI H G+ K+ + +E G +
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 188/410 (45%), Gaps = 55/410 (13%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A + + +I G+ P T++ LI+G C R EA+ ++ M + G P + T L+
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
G C GK+ A + +MV G P+ TYG ++ +C+ G+ + A +L +M +
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
Y+ +++ C G A +L +EM KGF D ++IY I G C GR ++
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD-----IIIYTTLIRGFCYAGRWDD 300
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
+LR M ++PDVV+++ +I F K G+ +A EL EM ++GI
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS----------- 349
Query: 278 DLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVIS----------SVRINGL 327
D VTY++LI D +C E+++ + +++ D ++S ++ ING
Sbjct: 350 --PDTVTYTSLI----------DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 328 NKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHK 387
KA I+ L R + + TY+TLI+ F G
Sbjct: 398 C-KANLIDDGLELFRKMSLRGV-VADTVTYNTLIQG---------------FCELGKLEV 440
Query: 388 AAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
A + +M+ +P+ Y +L+ C +G KA +++++ S +E+
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 136/267 (50%), Gaps = 5/267 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD S + Q+DKA++ML M+ +G P++ T+N LI+GYC+A+ + +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ R M+ RG+ D TY LI GFC+ GKL A E+ +MV + + PD +Y IL+ L
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C G KA ++F ++ + + IY +++ C + A DL + KG PD
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD- 526
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ YN I G C G + EA + R M + G SP+ +Y +I+ G+ K+
Sbjct: 527 ----VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSD 281
+L E+ G + + ++D LSD
Sbjct: 583 KLIEEIKRCGFSVDASTVKMVVDMLSD 609
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 125/250 (50%), Gaps = 5/250 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD + + + ++ +A + K MI RG SP TY LI G+C+ ++ +A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L M +G P++ T+ LI G+C+ + E+ KM +G++ D TY LI
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C G+L A +LF EM+ V P Y L++ C GE KAL++ E I K +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF-EKIEKSKMELD 491
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
I IYN IHG C +V++A + + G+ PDV +Y +I G CK G +A
Sbjct: 492 IG----IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 255 ELKLEMDEKG 264
L +M+E G
Sbjct: 548 LLFRKMEEDG 557
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 171/382 (44%), Gaps = 36/382 (9%)
Query: 72 EAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILI 131
+AV + ++M + P + + L +T + ++ +M KGI + T I+I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 132 LTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL 191
CR +LS AF ++++ G P ++ L+N C +G S+AL+L D M+ G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH- 173
Query: 192 PDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPV 251
P+L+ NA ++G C+ G+V +A+ ++ M + G P+ V+Y V+K CK G+
Sbjct: 174 ----KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 252 KAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEY 311
A EL +M+E+ I L D V YS +I+ G+L +A+ L +EM
Sbjct: 230 LAMELLRKMEERKIKL-------------DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 312 SYLTDDVISSVRING-----------------LNKKAT-TIEAKRSLVRWFYQDCLSIPA 353
+ D +I + I G + +K T + A +L+ F ++ A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 354 YRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFD 413
+ +I+ + + T L+ F KA D M+ P +N+LI
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 414 HCRHGNVHKAYDMYKETVHSGV 435
+C+ + +++++ GV
Sbjct: 397 YCKANLIDDGLELFRKMSLRGV 418
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 188/420 (44%), Gaps = 37/420 (8%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P+ + +H L + +A ++ M+ +G P + TY +++G C+ A +
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L M + L P V Y +I G C+ + A + +M KGI P+ TY LI LC
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
GR S A L +M+ ++P + ++ L++ + +G+ +A L DEM+ + I
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-----SID 358
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
PS+V Y++ I+G C+ R++EA + M PDVV+Y +IKGFCK + E+
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
EM ++G+ + + VTY+ LI G+ A + EM +
Sbjct: 419 FREMSQRGL-------------VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 317 DVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGL 375
+ + ++GL K K +V + Q P TY+ +IE C + + L
Sbjct: 466 IMTYNTLLDGLCKNGKL--EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 376 VKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+ S++G+ KP+ YN +I CR G+ +A ++KE G
Sbjct: 524 FCNLSLKGV----------------KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 173/387 (44%), Gaps = 30/387 (7%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
V+ L D A N+L M P V YN +I G C+ +A+ + ++M +G+
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P+V TY LI C G+ A + + M+ + I PD T+ LI ++G+L +A
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
L+ EM++ + P Y+ L+N +C +A + + M++K PD +V YN
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD-----VVTYNTL 402
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
I G C RVEE + + R M+ GL + V+Y +I+G + G+ A E+ EM G+
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 266 PLYEDIYQSLLDDLSDE----------------------VTYSTLINDFHAQGNLMDAYC 303
P Y +LLD L TY+ +I G + D +
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 304 LESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIE- 362
L +S D V + I+G +K + EA +L + +D ++P Y+TLI
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD-ALFKEMKEDG-TLPNSGCYNTLIRA 580
Query: 363 NCSNNEFKTVVGLVKDFSMRGLAHKAA 389
+ + + L+K+ G A A+
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDAS 607
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 147/291 (50%), Gaps = 10/291 (3%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++PD + + + + ++ +A + M+ R PS+ TY+ LI+G+C DR EA
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ M + PDV TY LI GFC+ ++ + E+ +M +G++ + TY ILI L
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ G A ++F EM+ +GV P+ Y L++ C G+ KA+ ++ +
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM-----VVFEYLQRSK 496
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ P++ YN I G C G+VE+ + ++ G+ PDVV+Y +I GFC+ G +A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 255 ELKLEMDEKG-IP---LYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDA 301
L EM E G +P Y + ++ L D D + LI + + G DA
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRD-GDREASAELIKEMRSCGFAGDA 606
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 183/439 (41%), Gaps = 53/439 (12%)
Query: 20 RNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRD 79
RN LS++ ++D A + M+ PS+ +++L+ + ++F + +
Sbjct: 54 RNGLSEL-------KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQ 106
Query: 80 MAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
M G+ + TY LI FC+ +L A + KM+ G P+ T L+ C R
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
+S+A L +M G P+ + L++ + S+A+ L D M+ KG PD L
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD-----L 221
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
V Y ++G C G + A +L M L P V+ Y +I G CK A L E
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 260 MDEKGIPLYEDIYQSLLDDLS----------------------DEVTYSTLINDFHAQGN 297
M+ KGI Y SL+ L D T+S LI+ F +G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 298 LMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTY 357
L++A L EM + S V S ING EAK+ + C P TY
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF--PDVVTY 399
Query: 358 DTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCR 416
+TLI+ C + + + ++ S RGL GN YN+LI +
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLV------------GNT----VTYNILIQGLFQ 443
Query: 417 HGNVHKAYDMYKETVHSGV 435
G+ A +++KE V GV
Sbjct: 444 AGDCDMAQEIFKEMVSDGV 462
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ L D A + K M+ G P++ TYN L+ G C+ + ++A+ + + + +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P + TY +I G C+ GK+ +++ + KG+ PD Y +I CRKG +A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
LF EM +G P+ Y L+ G+ + +L EM + GF D + LV
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 184/383 (48%), Gaps = 31/383 (8%)
Query: 28 SLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSP 87
+L + ++D A +L M +P V +YN L+HGY + +F EA + D+ + P
Sbjct: 352 ALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHP 407
Query: 88 DVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLF 147
+ TY LI G C++G L A +K +M + I PD TY L+ + G LS A +++
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 148 LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIH 207
EMLR+G+ P Y YT G+ KA L +EM+ D +P L IYN RI
Sbjct: 468 DEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMV----ATDHHAPDLTIYNVRID 523
Query: 208 GCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPL 267
G C +G + +A+ R + +GL PD V+YT VI+G+ + G+ A L EM L
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM------L 577
Query: 268 YEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGL 327
+ +Y S+ +TY LI G L A+ +EM + + + + + G+
Sbjct: 578 RKRLYPSV-------ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 630
Query: 328 NKKATTIEAKRSLVRWFYQDCLSIPAYR-TYDTLI-ENCSNNEFKTVVGLVKDFSMR--- 382
K EA R L + + IP + +Y LI +NC +++ VV L K+ +
Sbjct: 631 CKAGNIDEAYRYLCKMEEE---GIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Query: 383 --GLAHKAAKAHDKMLHGNYKPE 403
G H+A H + H + + E
Sbjct: 688 PDGYTHRALFKHLEKDHESREVE 710
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 175/404 (43%), Gaps = 51/404 (12%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
M R S TYN LI+G+ + + +EA DM + G + ++ PLI G+C+ G
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 323
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
A+ + +M++ GI P TY I I LC GR+ A +L M +P Y
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNT 379
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
LM+ Y G+F +A L D++ I PS+V YN I G C G +E A +
Sbjct: 380 LMHGYIKMGKFVEASLLFDDL-----RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEE 434
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT 284
M + PDV++YT ++KGF K G A E+ EM KGI D
Sbjct: 435 MTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK-------------PDGYA 481
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDV-ISSVRINGLNKKAT---TIEAKRSL 340
Y+T G+ A+ L EM + D+ I +VRI+GL K IE +R +
Sbjct: 482 YTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI 541
Query: 341 VRWFYQDCLSIPAYRTYDTLIEN-CSNNEFK-------------------TVVGLVKDFS 380
R +P + TY T+I N +FK T L+ +
Sbjct: 542 FR-----VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHA 596
Query: 381 MRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAY 424
G +A + +M +P +N L++ C+ GN+ +AY
Sbjct: 597 KAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 187/459 (40%), Gaps = 83/459 (18%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSV---------------------- 54
P RN + L + ++KA + + MI G P+V
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 55 -------------ATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQ 101
TYN LI+G+ + + +EA DM + G + ++ PLI G+C+
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK 320
Query: 102 TGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYI 161
G A+ + +M++ GI P TY I I LC GR+ A +L M +P
Sbjct: 321 QGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVS 376
Query: 162 YTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGI 221
Y LM+ Y G+F +A L D++ I PS+V YN I G C G +E A +
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDL-----RAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 222 LRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD 281
M + PDV++YT ++KGF K G A E+ EM KGI D
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK-------------PD 478
Query: 282 EVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDV-ISSVRINGLNKKAT---TIEAK 337
Y+T G+ A+ L EM + D+ I +VRI+GL K IE +
Sbjct: 479 GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQ 538
Query: 338 RSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKML 396
R + R +P + TY T+I N +FK A +D+ML
Sbjct: 539 RKIFR-----VGLVPDHVTYTTVIRGYLENGQFKM----------------ARNLYDEML 577
Query: 397 HGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
P Y +LI+ H + G + +A+ E GV
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 179/393 (45%), Gaps = 42/393 (10%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
MI +GF PSV N ++ + +A + M + G+ P V T+ ++ + G
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
L + ++ +M + I TY ILI + G++ +A +M R G + Y +
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 313
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
L+ YC +G F A + DEM+N GI P+ YN I C GR+++A +L
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNA-----GIYPTTSTYNIYICALCDFGRIDDARELLSS 368
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT 284
MA +PDVVSY ++ G+ K+G+ V+A L ++ DI+ S+ VT
Sbjct: 369 MA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG------DIHPSI-------VT 411
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWF 344
Y+TLI+ GNL A L+ EM+ D + + + G K
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGN------------ 459
Query: 345 YQDCLSIPAYRTYDTLI-ENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGN-YKP 402
LS+ A YD ++ + + + V + + G + KA + H++M+ + + P
Sbjct: 460 ----LSM-ATEVYDEMLRKGIKPDGYAYTTRAVGELRL-GDSDKAFRLHEEMVATDHHAP 513
Query: 403 EGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+ IYN+ I C+ GN+ KA + ++ G+
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 90/170 (52%)
Query: 25 QVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
++ L V + KA + + G P TY +I GY +FK A + +M ++
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
L P V TY+ LI G + G+L +AF+ +M +G+ P+ T+ L+ +C+ G + +A+
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 145 DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+M EG+ P+KY YT L++ C ++ + + L EM++K PDG
Sbjct: 641 RYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 690
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 13 VILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKE 72
V L PD + + L Q A N+ M+ + PSV TY LI+G+ +A R ++
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 603
Query: 73 AVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILIL 132
A +M KRG+ P+V T+ L+ G C+ G + +A+ KM +GI P+ +Y +LI
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Query: 133 TLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
C + + L+ EML + + P Y + L +
Sbjct: 664 KNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKH 699
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 138/339 (40%), Gaps = 42/339 (12%)
Query: 114 KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK- 172
KM+ KG LP I++ L ++KA ++ M+ G+ P + +++ CFK
Sbjct: 193 KMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLD-SCFKA 251
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
G+ + + EM + I S V YN I+G G++EEA M G +
Sbjct: 252 GDLERVDKIWLEMKRR-----NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAV 306
Query: 233 DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIY----------------QSLL 276
S+ +I+G+CK G A+ + EM GI Y + LL
Sbjct: 307 TPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELL 366
Query: 277 DDLS--DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTI 334
++ D V+Y+TL++ + G ++A L ++ V + I+GL +
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 335 EAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDK 394
A+R Q L P TY T LVK F G A + +D+
Sbjct: 427 GAQRLKEEMTTQ--LIFPDVITYTT---------------LVKGFVKNGNLSMATEVYDE 469
Query: 395 MLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHS 433
ML KP+G Y R G+ KA+ +++E V +
Sbjct: 470 MLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVAT 508
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 106/265 (40%), Gaps = 36/265 (13%)
Query: 183 DEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIK 242
++MI KGFLP + ++V+ R + +A + M + G+ P V+++ ++
Sbjct: 192 EKMIRKGFLPSVRNCNIVLKVLRDSRM-----MNKASAVYETMIEHGIMPTVITFNTMLD 246
Query: 243 GFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAY 302
K G+ + ++ LEM + I EVTY+ LIN F G + +A
Sbjct: 247 SCFKAGDLERVDKIWLEMKRRNIEF-------------SEVTYNILINGFSKNGKMEEAR 293
Query: 303 CLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCL----SIPAYRTYD 358
+M + + I G K+ +A W D + P TY+
Sbjct: 294 RFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDA------WGVTDEMLNAGIYPTTSTYN 347
Query: 359 TLIENCSNNEFKTVVGLVKDFS--MRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCR 416
I C+ +F G + D + +A +++ ++HG K + L+FD R
Sbjct: 348 IYI--CALCDF----GRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLR 401
Query: 417 HGNVHKAYDMYKETVHSGVEIGRAE 441
G++H + Y + E G E
Sbjct: 402 AGDIHPSIVTYNTLIDGLCESGNLE 426
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 181/442 (40%), Gaps = 65/442 (14%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ L ++D A M+ +I +G P V TYN LI+G C+ +F+EA L M GL
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD TY LI G+C+ G + A + V G +PD TY LI LC +G ++A
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD------------ 193
LF E L +G+ P+ +Y L+ +G +A L +EM KG +P+
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 194 ------------------GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
G P + +N IHG ++E AL IL M D G+ PDV
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 236 SYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQ 295
+Y +++ G CK + E M EKG + T++ L+
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCA-------------PNLFTFNILLESLCRY 544
Query: 296 GNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWF---YQDCLSIP 352
L +A L EM S D V I+G K ++ +L R Y+ S P
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG-DLDGAYTLFRKMEEAYKVSSSTP 603
Query: 353 AYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIF 412
Y ++ F+ + A K +M+ P+G Y L++
Sbjct: 604 TYNI------------------IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVD 645
Query: 413 DHCRHGNVHKAYDMYKETVHSG 434
C+ GNV+ Y E + +G
Sbjct: 646 GFCKTGNVNLGYKFLLEMMENG 667
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 201/428 (46%), Gaps = 42/428 (9%)
Query: 23 LSQVHSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILR 78
LS + LL V V + +L +I RG P++ TYN I G C+ AV ++
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 79 DMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKG 138
+ ++G PDV TY LI G C+ K +A KMV++G+ PD+ TY LI C+ G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 139 RLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPS 198
+ A + + + G P ++ Y L++ C +GE ++AL L +E + K GI P+
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK-----GIKPN 390
Query: 199 LVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKL 258
+++YN I G G + EA + M++ GL P+V ++ ++ G CK+G A L
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 259 EMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDV 318
M KG + DI+ T++ LI+ + Q + +A + M + D
Sbjct: 451 VMISKG--YFPDIF-----------TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 319 ISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIE-NCSNNEFKTVVGLVK 377
+ +NGL K + ++D + TY T++E C+ N F + L
Sbjct: 498 TYNSLLNGLCKTSK------------FEDVM-----ETYKTMVEKGCAPNLFTFNILLES 540
Query: 378 DFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
R L +A ++M + + P+ + LI C++G++ AY ++++ + ++
Sbjct: 541 LCRYRKL-DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK-MEEAYKV 598
Query: 438 GRAEPSFT 445
+ P++
Sbjct: 599 SSSTPTYN 606
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 149/321 (46%), Gaps = 28/321 (8%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD+ S + L + + ++A + + +G P+V YN LI G EA +
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
+M+++GL P+V T+ L+ G C+ G + A + M+ KG PD T+ ILI
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
+ ++ A ++ ML GV P Y Y L+N C +F ++ M+ K G +
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK-----GCA 528
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P+L +N + C +++EALG+L M + ++PD V++ +I GFCK G+ A+ L
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 257 KLEMDEK---------------------GIPLYEDIYQSLLDDL--SDEVTYSTLINDFH 293
+M+E + + E ++Q ++D D TY +++ F
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 294 AQGNLMDAYCLESEMSEYSYL 314
GN+ Y EM E ++
Sbjct: 649 KTGNVNLGYKFLLEMMENGFI 669
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 180/421 (42%), Gaps = 44/421 (10%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
D+AH + M RG +P V ++ + +C+ R A+ +L +M+ +G +V Y +
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
+ GF + + +E+ KM+ G+ T+ L+ LC+KG + + L ++++ GV
Sbjct: 188 VGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV 247
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRV 215
P+ + Y + C +GE A+ + +I +G PD ++ YN I+G C +
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD-----VITYNNLIYGLCKNSKF 302
Query: 216 EEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSL 275
+EA L M + GL PD +Y +I G+CK G A + + G + Y+SL
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 276 LDDLSDE----------------------VTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
+D L E + Y+TLI QG +++A L +EMSE
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 314 LTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVV 373
+ + ++ +NGL K +A LV+ P T++ LI
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDAD-GLVKVMISKGY-FPDIFTFNILIHG---------- 470
Query: 374 GLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHS 433
+S + A + D ML P+ YN L+ C+ + YK V
Sbjct: 471 -----YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 434 G 434
G
Sbjct: 526 G 526
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 122/253 (48%), Gaps = 5/253 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L P+ + V+ L + V A ++K MI +G+ P + T+N LIHGY + + A+
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
IL M G+ PDV TY L+ G C+T K E MV KG P+ T+ IL+ +L
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
CR +L +A L EM + V+P + L++ +C G+ A L +M
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE----AYK 597
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+S S YN IH V A + + M D L PD +Y ++ GFCK G +
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 255 ELKLEMDEKG-IP 266
+ LEM E G IP
Sbjct: 658 KFLLEMMENGFIP 670
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DPD S ++ L + + K M+ +G +P++ T+N L+ CR + EA+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK-GILPDADTYGILILT 133
G+L +M + ++PD T+ LI GFC+ G L A+ + KM + TY I+I
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
K ++ A LF EM+ + P Y Y +++ +C G + EM+ GF+P
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP- 670
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVS 236
SL I+ CV RV EA GI+ M GL P+ V+
Sbjct: 671 ----SLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 10 NKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMI-VRGFSPSVATYNELIHGYCRAD 68
NK+V +PD + + +D A+ + + M S S TYN +IH +
Sbjct: 559 NKSV--NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616
Query: 69 RFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYG 128
A + ++M R L PD TY ++ GFC+TG + ++ +M+ G +P T G
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLG 676
Query: 129 ILILTLCRKGRLSKAFDLFLEMLREGVSPH 158
+I LC + R+ +A + M+++G+ P
Sbjct: 677 RVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 147/361 (40%), Gaps = 51/361 (14%)
Query: 100 CQTGKLGKAFEMKAKMVHK-GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPH 158
CQ + KA EM M + G TY +I L G+ ++ ++M RE V H
Sbjct: 16 CQKDPM-KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM-RENVGNH 73
Query: 159 --KYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
+ +Y M Y KG+ +A+++ + M F P++ YNA + G +
Sbjct: 74 MLEGVYVGAMKNYGRKGKVQEAVNVFERM---DFYD--CEPTVFSYNAIMSVLVDSGYFD 128
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPL--------- 267
+A + M D G++PDV S+T +K FCK P A L M +G +
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVV 188
Query: 268 ---YEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVIS---- 320
YE+ +++ +L ++ S + L+ C + ++ E L D VI
Sbjct: 189 GGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVL 248
Query: 321 ------SVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVV 373
++ I GL ++ A R + Q P TY+ LI C N++F+
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG--PKPDVITYNNLIYGLCKNSKFQ--- 303
Query: 374 GLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHS 433
+A KM++ +P+ YN LI +C+ G V A + + V +
Sbjct: 304 -------------EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 434 G 434
G
Sbjct: 351 G 351
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 195/422 (46%), Gaps = 45/422 (10%)
Query: 21 NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM 80
N+ S L + + +KA ++++ MI +GF P +TY+++++ C A + + A + +M
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 81 AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRL 140
+ GL DV TY ++ FC+ G + +A + +M G P+ TY LI + ++
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 141 SKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKAL----------DLPD-EMINKG 189
S A +LF ML EG P+ Y+ L++ +C G+ KA D+PD +M K
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 190 FLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
+ + P++V Y A + G C RVEEA +L M+ G P+ + Y +I G CK+G+
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689
Query: 250 PVKAFELKLEMDEKGIP--LYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESE 307
+A E+K EM E G P LY TYS+LI+ + A + S+
Sbjct: 690 LDEAQEVKTEMSEHGFPATLY---------------TYSSLIDRYFKVKRQDLASKVLSK 734
Query: 308 MSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNN 367
M E S + VI + I+GL K T E AY+ + E
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDE-----------------AYKLMQMMEEKGCQP 777
Query: 368 EFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMY 427
T ++ F M G + ++M P Y +LI C++G + A+++
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837
Query: 428 KE 429
+E
Sbjct: 838 EE 839
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 30 LNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDV 89
LN Q+ + +L M++ G PS +N L+H YC + A +L+ M K G P
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407
Query: 90 DTYYPLI---CG--------------------------------------FCQTGKLGKA 108
Y LI CG C GK KA
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
F + +M+ +G +PD TY ++ LC ++ AF LF EM R G+ Y YT +++
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+C G +A +EM G +P++V Y A IH +V A + M
Sbjct: 528 FCKAGLIEQARKWFNEMREVG-----CTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM-DEKGIPLYEDIYQSLLDDLSDE---VT 284
G P++V+Y+ +I G CK G+ KA ++ M K +P D+Y DD S+ VT
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV-DMYFKQYDDNSERPNVVT 641
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWF 344
Y L++ F + +A L MS + ++ I+GL K EA+
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 345 YQDCLSIPA-YRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPE 403
PA TY +LI + FK VK + A+K KML + P
Sbjct: 702 EH---GFPATLYTYSSLI----DRYFK-----VKRQDL------ASKVLSKMLENSCAPN 743
Query: 404 GAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
IY +I C+ G +AY + + G +
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 131/273 (47%), Gaps = 11/273 (4%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
S + V + D A +L M+ +P+V Y E+I G C+ + EA +++ M ++
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
G P+V TY +I GF GK+ E+ +M KG+ P+ TY +LI C+ G L A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
+L EM + H Y +++ F EF ++L L DE+ D +P L +Y
Sbjct: 834 HNLLEEMKQTHWPTHTAGYRKVIEG--FNKEFIESLGLLDEIGQ-----DDTAPFLSVYR 886
Query: 204 ARIHGCCVLGRVEEALGILRGMADMG--LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMD 261
I R+E AL +L +A L +Y ++I+ C + AF+L EM
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
Query: 262 EKGIPLYEDIYQSLLDDL--SDEVTYSTLINDF 292
+KG+ + SL+ L + +++ + L+ DF
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLLLDF 979
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 62/342 (18%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P+V TY L+ G+C++ R +EA +L M+ G P+ Y LI G C+ GKL +A E+
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
K +M G TY LI + R A + +ML +P+ IYT +++ C
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 172 KGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
G+ +A L M KG P++V Y A I G ++G++E L +L M G++
Sbjct: 757 VGKTDEAYKLMQMMEEKG-----CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYE---------------------- 269
P+ V+Y +I CK G A L EM + P +
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLD 871
Query: 270 -----------DIYQSLLDDL-------------SDEVTYSTLINDFHAQGN-LMDAYCL 304
+Y+ L+D+L + T+S + D+ + N L+++ CL
Sbjct: 872 EIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCL 931
Query: 305 E----------SEMSEYSYLTDDVISSVRINGLNKKATTIEA 336
SEM++ + + I GL + + EA
Sbjct: 932 ANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 156/425 (36%), Gaps = 79/425 (18%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLS----------------------- 86
F PS +TYN LI + +ADR A I R+M+ L
Sbjct: 231 FRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREAL 290
Query: 87 ---------PDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
PD Y LI G C+ +A + +M LP+ TY L+ K
Sbjct: 291 TLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 350
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
+L + + M+ EG P I+ L++ YC G+ S A L +M+ G + P
Sbjct: 351 KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM-----P 405
Query: 198 SLVIYNARIHGCC---------VLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
V+YN I C +L E+A M G+ + ++ ++ + C G
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYS---EMLAAGVVLNKINVSSFTRCLCSAG 462
Query: 249 EPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
+ KAF + EM +G + D TYS ++N + A+ L EM
Sbjct: 463 KYEKAFSVIREMIGQGF-------------IPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 309 SEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNE 368
+ D ++ ++ KA IE R +WF + + E
Sbjct: 510 KRGGLVADVYTYTIMVDSFC-KAGLIEQAR---KWF-------------NEMREVGCTPN 552
Query: 369 FKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYK 428
T L+ + A + + ML P Y+ LI HC+ G V KA +++
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 429 ETVHS 433
S
Sbjct: 613 RMCGS 617
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 181/404 (44%), Gaps = 70/404 (17%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+D A N+ M ++G + ++ TYN LI G+C A R+ + +LRDM KR ++P+V T+
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI F + GKL +A E+ +M+H+GI PD TY LI C++ L KA + M+ +
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G P+ + L+N YC L+L +M +G + D ++ YN I G C LG
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT-----YNTLIQGFCELG 452
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
++ A + + M + P++V+Y ++ G C GE KA E ++E I +
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE-----------IFEKIEK 501
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
S ++ D Y+ +I+ + DA+ D+ S+ + G+
Sbjct: 502 SKME--LDIGIYNIIIHGMCNASKVDDAW--------------DLFCSLPLKGVK----- 540
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHD 393
P +TY+ +I GL K +G +A
Sbjct: 541 ------------------PGVKTYNIMIG-----------GLCK----KGPLSEAELLFR 567
Query: 394 KMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
KM + P+G YN+LI H G+ K+ + +E G +
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSV 611
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 191/426 (44%), Gaps = 50/426 (11%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A + + +I G+ P+ T++ LI+G C R EA+ ++ M + G PD+ T L+
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
G C +GK +A + KMV G P+A TYG ++ +C+ G+ + A +L +M +
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
Y+ +++ C G A +L +EM K GI+ +++ YN I G C GR ++
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-----GITTNIITYNILIGGFCNAGRWDD 316
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
+LR M ++P+VV+++ +I F K G+ +A EL EM +GI Y SL+D
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Query: 278 DLSDE----------------------VTYSTLINDFHAQGNLMDAYCLESEMSEYSYLT 315
E T++ LIN + + D L +MS +
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 316 DDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSI---PAYRTYDTLIENCSNNEFKTV 372
D V + I G + K ++ + +Q+ +S P TY L++ +N
Sbjct: 437 DTVTYNTLIQGFCEL-----GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN----- 486
Query: 373 VGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVH 432
G + KA + +K+ + + IYN++I C V A+D++
Sbjct: 487 ----------GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 433 SGVEIG 438
GV+ G
Sbjct: 537 KGVKPG 542
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 193/442 (43%), Gaps = 48/442 (10%)
Query: 19 ERNL--LSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
+RNL ++ S L + D A ++ + MI P+V ++ L + ++ + +
Sbjct: 51 DRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLAL 110
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
+ M +G++ ++ T +I FC+ KL AF K++ G P+ T+ LI LC
Sbjct: 111 CKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCL 170
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
+GR+S+A +L M+ G P L+N C G+ ++A+ L D+M+ G P+ ++
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
Y ++ C G+ A+ +LR M + + D V Y+ +I G CK G AF L
Sbjct: 231 -----YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 257 KLEMDEKGIPLYEDIYQ----------------SLLDDL------SDEVTYSTLINDFHA 294
EM+ KGI Y LL D+ + VT+S LI+ F
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
+G L +A L EM D + + I+G K+ +A + + + C P
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC--DPNI 403
Query: 355 RTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFD 413
RT++ LI C N + L + S+RG+ + YN LI
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVV----------------ADTVTYNTLIQG 447
Query: 414 HCRHGNVHKAYDMYKETVHSGV 435
C G ++ A ++++E V V
Sbjct: 448 FCELGKLNVAKELFQEMVSRKV 469
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 134/265 (50%), Gaps = 5/265 (1%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD S + +DKA+ M+ M+ +G P++ T+N LI+GYC+A+R + + +
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
R M+ RG+ D TY LI GFC+ GKL A E+ +MV + + P+ TY IL+ LC
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G KA ++F ++ + + IY +++ C + A DL + K G+
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-----GVK 540
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P + YN I G C G + EA + R M + G +PD +Y +I+ G+ K+ +L
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSD 281
E+ G + + ++D LSD
Sbjct: 601 IEELKRCGFSVDASTIKMVIDMLSD 625
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 168/400 (42%), Gaps = 38/400 (9%)
Query: 40 NMLKYMIVRGFSP---SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
N L + RGFS +Y E + + +A+ + RDM P V + L
Sbjct: 36 NELSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLF 95
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
+T + + +M KGI + T I+I CR +L AF ++++ G
Sbjct: 96 SAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYE 155
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P+ ++ L+N C +G S+AL+L D M+ G PD L+ N ++G C+ G+
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD-----LITINTLVNGLCLSGKEA 210
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
EA+ ++ M + G P+ V+Y V+ CK G+ A EL +M+E+ I L
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL--------- 261
Query: 277 DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEA 336
D V YS +I+ G+L +A+ L +EM T+ + ++ I G
Sbjct: 262 ----DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG----- 312
Query: 337 KRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKML 396
RW + +I+ N T L+ F G +A + H +M+
Sbjct: 313 -----RWD-------DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 397 HGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
H P+ Y LI C+ ++ KA M V G +
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 127/250 (50%), Gaps = 5/250 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++P+ + S + ++ +A + K MI RG +P TY LI G+C+ + +A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
++ M +G P++ T+ LI G+C+ ++ E+ KM +G++ D TY LI
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C G+L+ A +LF EM+ V P+ Y L++ C GE KAL++ E I K +
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF-EKIEKSKMELD 507
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
I IYN IHG C +V++A + + G+ P V +Y +I G CK G +A
Sbjct: 508 IG----IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 255 ELKLEMDEKG 264
L +M+E G
Sbjct: 564 LLFRKMEEDG 573
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 13/241 (5%)
Query: 1 MMITASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNEL 60
+M++ C DP+ R ++ ++D + + M +RG TYN L
Sbjct: 393 LMVSKGC--------DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 61 IHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGI 120
I G+C + A + ++M R + P++ TY L+ G C G+ KA E+ K+ +
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 121 LPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALD 180
D Y I+I +C ++ A+DLF + +GV P Y ++ C KG S+A
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 181 LPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNV 240
L +M G PDG + YN I G +++ ++ + G S D + V
Sbjct: 565 LFRKMEEDGHAPDGWT-----YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 241 I 241
I
Sbjct: 620 I 620
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 210/481 (43%), Gaps = 69/481 (14%)
Query: 2 MITASCKNNKAVILDP-----DERNLLSQVHSLLNV--------YQVDKAHNMLKYMIVR 48
MI CK V D ER L V L N+ Y+VD A + + ++I
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAES-IGWIIAN 339
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
P VATYN LI+ C+ + + AVG L + +K+GL P+ +Y PLI +C++ + A
Sbjct: 340 DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIA 399
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
++ +M +G PD TYGILI L G + A ++ ++++ GVSP IY LM+
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
C G F A L EM+++ LPD +Y I G G +EA + +
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDA-----YVYATLIDGFIRSGDFDEARKVFSLSVEK 514
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD------DLS-- 280
G+ DVV + +IKGFC+ G +A M+E+ + + Y +++D D++
Sbjct: 515 GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATA 574
Query: 281 --------------DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRING 326
+ VTY++LIN F QG+ A EM + + V + I
Sbjct: 575 IKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 327 LNKKATTIEAKRSLVRW---FYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRG 383
L K+++T+E +++ W C +P T++ L++ G VK S +
Sbjct: 635 LAKESSTLE--KAVYYWELMMTNKC--VPNEVTFNCLLQ-----------GFVKKTSGKV 679
Query: 384 LAHKAAKAHD----------KMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHS 433
LA H +M + A YN + C HG V A + V
Sbjct: 680 LAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKK 739
Query: 434 G 434
G
Sbjct: 740 G 740
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 177/439 (40%), Gaps = 70/439 (15%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
V + N +V+ +++ +G P++ YN +I GYC+ + A + +++ +G
Sbjct: 212 VKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGF 271
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGIL------------------------ 121
P ++T+ +I GFC+ G + + +++ +G+
Sbjct: 272 MPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAE 331
Query: 122 -----------PDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
PD TY ILI LC++G+ A E ++G+ P+ Y L+ YC
Sbjct: 332 SIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYC 391
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
E+ A L +M +G PD +V Y IHG V G +++A+ + + D G+
Sbjct: 392 KSKEYDIASKLLLQMAERGCKPD-----IVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV 446
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIN 290
SPD Y ++ G CK G + A L EM ++ I L D Y+TLI+
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI-------------LPDAYVYATLID 493
Query: 291 DFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLS 350
F G+ +A + S E D V + I G + EA + R +
Sbjct: 494 GFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL-- 551
Query: 351 IPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLL 410
+P TY T+I+ G VK M A K M KP Y L
Sbjct: 552 VPDKFTYSTIID-----------GYVKQQDMA----TAIKIFRYMEKNKCKPNVVTYTSL 596
Query: 411 IFDHCRHGNVHKAYDMYKE 429
I C G+ A + +KE
Sbjct: 597 INGFCCQGDFKMAEETFKE 615
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 107/245 (43%), Gaps = 13/245 (5%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+D+A + M P TY+ +I GY + A+ I R M K P+V TY
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR-LSKAFDLFLEMLRE 153
LI GFC G A E +M + ++P+ TY LI +L ++ L KA + M+
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTN 655
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPD-------EMINKGF---LPDGISPSLVIYN 203
P++ + L+ + K K L PD + ++ F DG S YN
Sbjct: 656 KCVPNEVTFNCLLQGF-VKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYN 714
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKL-EMDE 262
+ + CV G V+ A M G SPD VS+ ++ GFC +G + + + E
Sbjct: 715 SALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGE 774
Query: 263 KGIPL 267
KG+ +
Sbjct: 775 KGLEV 779
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 154/389 (39%), Gaps = 45/389 (11%)
Query: 70 FKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVH-KGILPDADTYG 128
F E +L ++ + + ++ + ++G L KA E+ +V +PD
Sbjct: 115 FNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACN 174
Query: 129 ILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINK 188
L+ L + RL A ++ EM G S Y L+ C +G+ L + K
Sbjct: 175 SLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGK 234
Query: 189 GFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
G +P+ +V YN I G C LG +E A + + + G P + ++ +I GFCK G
Sbjct: 235 GCIPN-----IVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEG 289
Query: 249 EPVKAFELKLEMDEKGIPLY---------------------EDIYQSLLDDLSDEV-TYS 286
+ V + L E+ E+G+ + E I + +D +V TY+
Sbjct: 290 DFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYN 349
Query: 287 TLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQ 346
LIN +G A E S+ + +++ + I K A + L++ +
Sbjct: 350 ILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER 409
Query: 347 DCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAI 406
C P TY LI GLV + G A K++ P+ AI
Sbjct: 410 GCK--PDIVTYGILIH-----------GLV----VSGHMDDAVNMKVKLIDRGVSPDAAI 452
Query: 407 YNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
YN+L+ C+ G A ++ E + +
Sbjct: 453 YNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 20/218 (9%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD+ + + + + A + +YM P+V TY LI+G+C FK A
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFC-QTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
++M R L P+V TY LI ++ L KA M+ +P+ T+ L+
Sbjct: 611 ETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG 670
Query: 134 LCRK--------------GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKAL 179
+K G+ S + F M +G S H Y + C G A
Sbjct: 671 FVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTAC 730
Query: 180 DLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
D+M+ KGF PD +S + A +HG CV+G ++
Sbjct: 731 MFQDKMVKKGFSPDPVS-----FAAILHGFCVVGNSKQ 763
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 158/318 (49%), Gaps = 25/318 (7%)
Query: 20 RNLLSQV---HSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKE 72
RN++ V +L++V+ ++ +A + MI RG +P TYN LI G+C+ + E
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 73 AVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILIL 132
A + M +G PD+ TY LI +C+ ++ + ++ KG++P+ TY L+L
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 133 TLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLP 192
C+ G+L+ A +LF EM+ GV P Y L++ C GE +KAL++ ++M K +
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM-QKSRMT 487
Query: 193 DGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVK 252
GI IYN IHG C +V++A + ++D G+ PDVV+Y +I G CK G +
Sbjct: 488 LGIG----IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 253 AFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYS 312
A L +M E G D+ TY+ LI L+ + L EM
Sbjct: 544 ADMLFRKMKEDGCT-------------PDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 313 YLTDDVISSVRINGLNKK 330
+ D + I+ L+ +
Sbjct: 591 FSADSSTIKMVIDMLSDR 608
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 35/390 (8%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G+ P T++ L++G+C R EAV ++ M + PD+ T LI G C G++ +A
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ +MV G PD TYG ++ LC+ G + A DLF +M + Y+ +++
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
C G F AL L +EM K GI +V Y++ I G C G+ ++ +LR M
Sbjct: 255 LCKDGSFDDALSLFNEMEMK-----GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
+ PDVV+++ +I F K G+ ++A EL EM +GI D +TY++L
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA-------------PDTITYNSL 356
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDC 348
I+ F + L +A + M D V S+ IN KA ++ L R
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC-KAKRVDDGMRLFREISSKG 415
Query: 349 LSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYN 408
L IP TY+T LV F G + A + +M+ P Y
Sbjct: 416 L-IPNTITYNT---------------LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 409 LLIFDHCRHGNVHKAYDMYKETVHSGVEIG 438
+L+ C +G ++KA +++++ S + +G
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 173/367 (47%), Gaps = 29/367 (7%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PDE ++ L A ++ + M R SV Y+ +I C+ F +A+ +
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
+M +G+ DV TY LI G C GK +M +M+ + I+PD T+ LI +
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
+G+L +A +L+ EM+ G++P Y L++ +C + +A + D M++KG PD
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD--- 384
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
+V Y+ I+ C RV++ + + R ++ GL P+ ++Y ++ GFC+ G+ A EL
Sbjct: 385 --IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSD--------EV--------------TYSTLINDFHA 294
EM +G+P Y LLD L D E+ Y+ +I+
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
+ DA+ L +S+ D V +V I GL KK + EA L R +D + P
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM-LFRKMKEDGCT-PDD 560
Query: 355 RTYDTLI 361
TY+ LI
Sbjct: 561 FTYNILI 567
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 178/403 (44%), Gaps = 37/403 (9%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q D K M + G + T +I+ YCR + A +L K G PD T+
Sbjct: 85 QYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFS 144
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ GFC G++ +A + +MV PD T LI LC KGR+S+A L M+
Sbjct: 145 TLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY 204
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G P + Y ++N C G + ALDL +M + I S+V Y+ I C G
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-----NIKASVVQYSIVIDSLCKDG 259
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
++AL + M G+ DVV+Y+++I G C G + D+ L E I +
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG----------KWDDGAKMLREMIGR 309
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
+++ D+ VT+S LI+ F +G L++A L +EM D + + I+G K+
Sbjct: 310 NIIPDV---VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAH 392
EA + + C P TY LI + C + L ++ S +GL
Sbjct: 367 HEANQMFDLMVSKGCE--PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI------- 417
Query: 393 DKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
P YN L+ C+ G ++ A ++++E V GV
Sbjct: 418 ---------PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 181/428 (42%), Gaps = 49/428 (11%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD + V+ +V +A ++ M+ P + T + LI+G C R EA+
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
++ M + G PD TY P++ C++G A ++ KM + I Y I+I +LC
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
+ G A LF EM +G+ Y+ L+ C G++ + EMI + +PD
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD-- 314
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCK---IGEPVK 252
+V ++A I G++ EA + M G++PD ++Y ++I GFCK + E +
Sbjct: 315 ---VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 253 AFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYS 312
F+L M KG D VTYS LIN + + D L E+S
Sbjct: 372 MFDL---MVSKGCE-------------PDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 313 YLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSI---PAYRTYDTLIEN-CSNNE 368
+ + + + + G + AK +Q+ +S P+ TY L++ C N E
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKE-----LFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 369 FKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYK 428
+KA + +KM IYN++I C V A+ ++
Sbjct: 471 L----------------NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 429 ETVHSGVE 436
GV+
Sbjct: 515 SLSDKGVK 522
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 13/241 (5%)
Query: 1 MMITASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNEL 60
+M++ C +PD ++S +VD + + + +G P+ TYN L
Sbjct: 375 LMVSKGC--------EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 61 IHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGI 120
+ G+C++ + A + ++M RG+ P V TY L+ G C G+L KA E+ KM +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 121 LPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALD 180
Y I+I +C ++ A+ LF + +GV P Y ++ C KG S+A
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 181 LPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNV 240
L +M G PD + +++I A + G ++ VE ++ M G S D + V
Sbjct: 547 LFRKMKEDGCTPDDFTYNILI-RAHLGGSGLISSVE----LIEEMKVCGFSADSSTIKMV 601
Query: 241 I 241
I
Sbjct: 602 I 602
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 147/391 (37%), Gaps = 83/391 (21%)
Query: 104 KLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLR----EGVSPHK 159
K+ A ++ M+ LP + LC +K +DL L + G+
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFN----RLCSAVARTKQYDLVLGFCKGMELNGIEHDM 105
Query: 160 YIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS----------------------- 196
Y T ++N YC K + A + G+ PD I+
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 197 -------PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
P LV + I+G C+ GRV EAL ++ M + G PD V+Y V+ CK G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 250 PVKAFELKLEMDEKGIPLYEDIYQSLLDDL----------------------SDEVTYST 287
A +L +M+E+ I Y ++D L +D VTYS+
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 288 LINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQD 347
LI G D + EM + + D V S I+ K+ +EAK Y +
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE-----LYNE 340
Query: 348 CLS---IPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEG 404
++ P TY++LI+ F H+A + D M+ +P+
Sbjct: 341 MITRGIAPDTITYNSLIDG---------------FCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 405 AIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
Y++LI +C+ V +++E G+
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGL 416
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 148/303 (48%), Gaps = 18/303 (5%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD S + L + + A M+ M R P V T+N LI + R EA
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+M +R L PD+ TY LI G C +L +A EM MV KG PD TY ILI
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C+ ++ LF EM + GV + YT L+ YC G+ + A E I + + G
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA-----EEIFRRMVFCG 391
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ P+++ YN +HG C G++E+AL IL M G+ D+V+Y +I+G CK GE A+
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
++ ++ +G L DI+ TY+T++ + +G +A L +M E L
Sbjct: 452 DIYCSLNCQG--LMPDIW-----------TYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 315 TDD 317
++
Sbjct: 499 PNE 501
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 178/410 (43%), Gaps = 76/410 (18%)
Query: 23 LSQVHSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILR 78
L + LLN + Q+ A + L MI G PS+ T+ L++G+CR DR +A+ +
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 79 DMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKG 138
M G P+V Y +I G C++ ++ A ++ +M GI PD TY LI LC G
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 139 RLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPS 198
R S A + M + + P + + L++ +G S+A + +EMI + PD ++ S
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 199 LVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKL 258
L+IY G C+ R++EA + M G PDVV+Y+ +I G+CK + +L
Sbjct: 296 LLIY-----GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 259 EMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDV 318
EM ++G+ + + VTY+ LI + G L A +++
Sbjct: 351 EMSQRGV-------------VRNTVTYTILIQGYCRAGKLNVA--------------EEI 383
Query: 319 ISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVK 377
+ G++ P TY+ L+ C N + + + ++
Sbjct: 384 FRRMVFCGVH-----------------------PNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 378 DFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMY 427
D G+ + YN++I C+ G V A+D+Y
Sbjct: 421 DMQKNGM----------------DADIVTYNIIIRGMCKAGEVADAWDIY 454
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 129/261 (49%), Gaps = 7/261 (2%)
Query: 5 ASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGY 64
SC + + PD + + + + +V +A + MI R P + TY+ LI+G
Sbjct: 244 VSCMTKREIY--PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 65 CRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDA 124
C R EA + M +G PDV TY LI G+C++ K+ ++ +M +G++ +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 125 DTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDE 184
TY ILI CR G+L+ A ++F M+ GV P+ Y L++ C G+ KAL + +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 185 MINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGF 244
M +G+ +V YN I G C G V +A I + GL PD+ +YT ++ G
Sbjct: 422 M-----QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Query: 245 CKIGEPVKAFELKLEMDEKGI 265
K G +A L +M E GI
Sbjct: 477 YKKGLRREADALFRKMKEDGI 497
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 160/382 (41%), Gaps = 37/382 (9%)
Query: 55 ATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAK 114
+ Y E++ R + +++ + M + P + + L+ + K + +
Sbjct: 47 SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106
Query: 115 MVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
M GI + T IL+ CR +LS A +M++ G P + L+N +C
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 175 FSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
AL + D+M+ G+ P++VIYN I G C +V+ AL +L M G+ PDV
Sbjct: 167 VYDALYMFDQMVGMGY-----KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHA 294
V+Y ++I G C G A + M ++ I Y D++ T++ LI+
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREI--YPDVF-----------TFNALIDACVK 268
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
+G + +A EM S D V S+ I GL + EA+ + C P
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF--PDV 326
Query: 355 RTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFD 413
TY LI C + + + + L + S RG+ Y +LI
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT----------------YTILIQG 370
Query: 414 HCRHGNVHKAYDMYKETVHSGV 435
+CR G ++ A ++++ V GV
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGV 392
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 195/416 (46%), Gaps = 47/416 (11%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H ++ A ++L M+ G+ PS+ T+ L+HG+C +R +A ++ M K G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P+V Y LI G C+ G+L A E+ +M KG+ D TY L+ LC GR S A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
+ +M++ ++P +T L++ + +G +A +L EMI + P+ V YN+
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ-----SSVDPNNVTYNSI 287
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
I+G C+ GR+ +A MA G P+VV+Y +I GFC K M ++G+
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC-----------KFRMVDEGM 336
Query: 266 PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRIN 325
L++ + + +D TY+TLI+ + G L A + M D + + ++
Sbjct: 337 KLFQRMSCEGFN--ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 326 GLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVK-DFSMRGL 384
GL E + +LV+ +D + E+ + +G+V + + GL
Sbjct: 395 GL---CVNGEIESALVK--------------FDDMRES------EKYIGIVAYNIMIHGL 431
Query: 385 --AHKAAKAHD---KMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
A K KA + ++ KP+ Y ++I C++G +A ++ + G+
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 167/381 (43%), Gaps = 21/381 (5%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+P S +H V ++ A +++ M+ G+ P+V YN LI G C+ A+
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+L +M K+GL DV TY L+ G C +G+ A M M+ + I PD T+ LI
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
++G L +A +L+ EM++ V P+ Y ++N C G A D M +KG P+
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN-- 315
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
+V YN I G C V+E + + + M+ G + D+ +Y +I G+C++G+ A +
Sbjct: 316 ---VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLT 315
+ M + + D +T+ L++ G + A +M E
Sbjct: 373 IFCWMVSRRVT-------------PDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 316 DDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVG 374
V ++ I+GL K +A R + P RTY +I C N +
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK--PDARTYTIMILGLCKNGPRREADE 477
Query: 375 LVKDFSMRGLAHKAAKAHDKM 395
L++ G+ + D +
Sbjct: 478 LIRRMKEEGIICQMNAEDDHL 498
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 178/407 (43%), Gaps = 44/407 (10%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
PS+ + L+ R++ + + M G+S D+ ++ LI FC+ +L A +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
KM+ G P T+G L+ C R+ AF L + M++ G P+ +Y L++ C
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 172 KGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
GE + AL+L +EM KG D +V YN + G C GR +A +LR M ++
Sbjct: 189 NGELNIALELLNEMEKKGLGAD-----VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIND 291
PDVV++T +I F K G +A E LY+++ QS +D + VTY+++IN
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQE-----------LYKEMIQSSVD--PNNVTYNSIING 290
Query: 292 FHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSI 351
G L DA M+ + V + I+G K E + R C
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR---MSCEGF 347
Query: 352 PA-YRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHG---NYKPEGAI 406
A TY+TLI C + + + + R + H +LHG N + E A+
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII-THCILLHGLCVNGEIESAL 406
Query: 407 -----------------YNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
YN++I C+ V KA++++ GV+
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 123/252 (48%), Gaps = 7/252 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++PD + + + +D+A + K MI P+ TYN +I+G C R +A
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
MA +G P+V TY LI GFC+ + + ++ +M +G D TY LI
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMI-NKGFLPD 193
C+ G+L A D+F M+ V+P + L++ C GE AL D+M ++ ++
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI-- 419
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
+V YN IHG C +VE+A + + G+ PD +YT +I G CK G +A
Sbjct: 420 ----GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 475
Query: 254 FELKLEMDEKGI 265
EL M E+GI
Sbjct: 476 DELIRRMKEEGI 487
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 153/369 (41%), Gaps = 35/369 (9%)
Query: 59 ELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK 118
+L G+ + RF++A + +M P + + L+ + KM
Sbjct: 41 KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
GI D ++ ILI CR RLS A + +M++ G P + L++ +C A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYT 238
L M+ G+ P++V+YN I G C G + AL +L M GL DVV+Y
Sbjct: 161 FSLVILMVKSGY-----EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 239 NVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNL 298
++ G C G A + +M ++ I D VT++ LI+ F QGNL
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSIN-------------PDVVTFTALIDVFVKQGNL 262
Query: 299 MDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYD 358
+A L EM + S ++V + INGL +AK++ + C P TY+
Sbjct: 263 DEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF--PNVVTYN 320
Query: 359 TLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHG 418
TLI F + + K +M + + YN LI +C+ G
Sbjct: 321 TLISG---------------FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 419 NVHKAYDMY 427
+ A D++
Sbjct: 366 KLRVALDIF 374
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 203/462 (43%), Gaps = 51/462 (11%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D R +L + L ++ +VD A ++ M+ PS+ +N+L+ + ++F+ + +
Sbjct: 49 DYREILR--NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG 106
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
M G+S D+ TY I FC+ +L A + AKM+ G PD T L+ C
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
R+S A L +M+ G P + +T L++ + S+A+ L D+M+ +G PD
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD---- 222
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELK 257
LV Y ++G C G ++ AL +L M + +VV + +I CK A +L
Sbjct: 223 -LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 258 LEMDEKGIPLYEDIYQSLLDDL------SDE----------------VTYSTLINDFHAQ 295
EM+ KGI Y SL++ L SD VT++ LI+ F +
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 296 GNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYR 355
G L++A L EM + S D + ++ ING EAK+ +DCL P +
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL--PNIQ 399
Query: 356 TYDTLIEN-CSNNEFKTVVGLVKDFSMRGLA-------------------HKAAKAHDKM 395
TY+TLI C + V L ++ S RGL A +M
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 396 LHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
+ + Y++L+ C +G + A ++K S +E+
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 190/450 (42%), Gaps = 63/450 (14%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD L S ++ + ++ A ++ M+ G+ P T+ LIHG ++ EAV
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
++ M +RG PD+ TY ++ G C+ G + A + KM I + + +I +LC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD-- 193
+ + A DLF EM +G+ P+ Y L+N C G +S A L M+ K P+
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 194 ----------------------------GISPSLVIYNARIHGCCVLGRVEEALGILRGM 225
I P + YN I+G C+ R++EA + + M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 226 ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTY 285
P++ +Y +I GFCK EL EM ++G+ + + VTY
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL-------------VGNTVTY 436
Query: 286 STLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFY 345
+T+I F G+ A + +M TD + S+ ++GL ++ + ++
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG-KLDTALVIFKYLQ 495
Query: 346 QDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGA 405
+ + + + Y+T+IE G+ K A K +A D + KP+
Sbjct: 496 KSEMELNIF-IYNTMIE-----------GMCK-------AGKVGEAWDLFCSLSIKPDVV 536
Query: 406 IYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
YN +I C + +A D++++ G
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 12/252 (4%)
Query: 15 LDPDE--RNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKE 72
+DPD NLL + N ++D+A M K+M+ + P++ TYN LI+G+C+ R ++
Sbjct: 359 IDPDTITYNLLINGFCMHN--RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 73 AVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILIL 132
V + R+M++RGL + TY +I GF Q G A + +MV + D TY IL+
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 133 TLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLP 192
LC G+L A +F + + + + +IY ++ C G+ +A DL F
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL--------FCS 528
Query: 193 DGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVK 252
I P +V YN I G C ++EA + R M + G P+ +Y +I+ + +
Sbjct: 529 LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAA 588
Query: 253 AFELKLEMDEKG 264
+ EL EM G
Sbjct: 589 SAELIKEMRSSG 600
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 42/314 (13%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
S ++ L N + A +L M+ + +P+V T+N LI + + + EA + +M +R
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
+ PD TY LI GFC +L +A +M MV K LP+ TY LI C+ R+
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
+LF EM + G+ + YT ++ + G+ A +M+ K + + + ++ Y+
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA-----QMVFKQMVSNRVPTDIMTYS 472
Query: 204 ARIHGCCVLGRVEEALGILR-------------------GMADMG-------------LS 231
+HG C G+++ AL I + GM G +
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK 532
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG-IP---LYEDIYQSLLDDLSDEVTYST 287
PDVV+Y +I G C +A +L +M E G +P Y + ++ L D D +
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD-CDRAASAE 591
Query: 288 LINDFHAQGNLMDA 301
LI + + G + DA
Sbjct: 592 LIKEMRSSGFVGDA 605
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
D A + K M+ + TY+ L+HG C + A+ I + + K + ++ Y +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
I G C+ GK+G+A+++ + I PD TY +I LC K L +A DLF +M +G
Sbjct: 510 IEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
P+ Y L+ + + + +L EM + GF+ D + SLV
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 182/396 (45%), Gaps = 35/396 (8%)
Query: 40 NMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGF 99
+ LK M+ R P VAT+N LI+ C F+++ +++ M K G +P + TY ++ +
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 100 CQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHK 159
C+ G+ A E+ M KG+ D TY +LI LCR R++K + L +M + + P++
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 160 YIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEAL 219
Y L+N + +G+ A L +EM L G+SP+ V +NA I G G +EAL
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEM-----LSFGLSPNHVTFNALIDGHISEGNFKEAL 393
Query: 220 GILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
+ M GL+P VSY ++ G CK E A + M G+ +
Sbjct: 394 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV------------ 441
Query: 280 SDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRS 339
+TY+ +I+ G L +A L +EMS+ D V S ING K AK
Sbjct: 442 -GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500
Query: 340 LVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGN 399
+ R Y+ LS P Y TLI NC G +A + ++ M+
Sbjct: 501 VCR-IYRVGLS-PNGIIYSTLIYNCCR---------------MGCLKEAIRIYEAMILEG 543
Query: 400 YKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+ + +N+L+ C+ G V +A + + G+
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 195/454 (42%), Gaps = 73/454 (16%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
+K+ +++ M G++P++ TYN ++H YC+ RFK A+ +L M +G+ DV TY L
Sbjct: 250 EKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML 309
Query: 96 ICGFCQTGKLGKAF----EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML 151
I C++ ++ K + +M+ +M+H P+ TY LI +G++ A L EML
Sbjct: 310 IHDLCRSNRIAKGYLLLRDMRKRMIH----PNEVTYNTLINGFSNEGKVLIASQLLNEML 365
Query: 152 REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLP------------------- 192
G+SP+ + L++ + +G F +AL + M KG P
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 425
Query: 193 -----------DGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI 241
+G+ + Y I G C G ++EA+ +L M+ G+ PD+V+Y+ +I
Sbjct: 426 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Query: 242 KGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDA 301
GFCK+G A E+ + G+ + + YSTLI + G L +A
Sbjct: 486 NGFCKVGRFKTAKEIVCRIYRVGLS-------------PNGIIYSTLIYNCCRMGCLKEA 532
Query: 302 YCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLI 361
+ M + D +V + L K EA+ +R D + +P ++D LI
Sbjct: 533 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE-FMRCMTSDGI-LPNTVSFDCLI 590
Query: 362 ENCSNN--------------------EFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYK 401
N+ F T L+K G +A K +
Sbjct: 591 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 650
Query: 402 PEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+ +YN L+ C+ GN+ KA ++ E V +
Sbjct: 651 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 206/518 (39%), Gaps = 83/518 (16%)
Query: 1 MMITASCKNNKAV------------ILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVR 48
M+I C++N+ ++ P+E + ++ N +V A +L M+
Sbjct: 308 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 367
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G SP+ T+N LI G+ FKEA+ + M +GL+P +Y L+ G C+ + A
Sbjct: 368 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 427
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+M G+ TY +I LC+ G L +A L EM ++G+ P Y+ L+N
Sbjct: 428 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGC------------------- 209
+C G F A ++ + G P+GI S +IYN GC
Sbjct: 488 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 547
Query: 210 -----------CVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKL 258
C G+V EA +R M G+ P+ VS+ +I G+ GE +KAF +
Sbjct: 548 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 607
Query: 259 EMDEKGIPLYEDIYQSLLDDLS----------------------DEVTYSTLINDFHAQG 296
EM + G Y SLL L D V Y+TL+ G
Sbjct: 608 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667
Query: 297 NLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEA---------------KRSLV 341
NL A L EM + S L D + I+GL +K T+ A + +
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 342 RWFYQDCLSIPAYRTYDTLIENCSN----NEFKTVVGLVKDFSMRGLAHKAAKAHDKMLH 397
F ++ E N + T ++ +S G K +M +
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 787
Query: 398 GNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
N P YN+L+ + + +V ++ +Y+ + +G+
Sbjct: 788 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 175/410 (42%), Gaps = 54/410 (13%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
+PSV Y+ LI Y R ++++ I R M G +P V T ++ ++G+ +
Sbjct: 162 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
+M+ + I PD T+ ILI LC +G K+ L +M + G +P Y ++++YC
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
KG F A++L D M +K G+ + YN IH C R+ + +LR M +
Sbjct: 280 KKGRFKAAIELLDHMKSK-----GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIN 290
P+ V+Y +I GF G+ + A +L EM G+ + VT++ LI+
Sbjct: 335 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS-------------PNHVTFNALID 381
Query: 291 DFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQD--- 347
++GN +A + M +V V ++GL K A+ L R FY
Sbjct: 382 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK-----NAEFDLARGFYMRMKR 436
Query: 348 ---CLSIPAYRTYDTLIENCSNNEF--------------------KTVVGLVKDFSMRGL 384
C+ TY +I+ N F T L+ F G
Sbjct: 437 NGVCV---GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493
Query: 385 AHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
A + ++ P G IY+ LI++ CR G + +A +Y+ + G
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 183/448 (40%), Gaps = 50/448 (11%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+D+A +L M G P + TY+ LI+G+C+ RFK A I+ + + GLSP+ Y
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI C+ G L +A + M+ +G D T+ +L+ +LC+ G++++A + M +G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+ P+ + L+N Y GE KA + DEM G P+ Y + + G C G
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-----HPTFFTYGSLLKGLCKGGH 633
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
+ EA L+ + + + D V Y ++ CK G KA L EM ++ I Y S
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693
Query: 275 LLDDLS-----------------------DEVTYSTLINDFHAQGNLMDAYCLESEMSEY 311
L+ L ++V Y+ ++ G +M
Sbjct: 694 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753
Query: 312 SYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSN-NEFK 370
+ D V ++ I+G ++ + L Q+ P TY+ L+ S +
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN--GGPNLTTYNILLHGYSKRKDVS 811
Query: 371 TVVGLVKDFSMRGLAHKAAKAHD--------KMLHGNYKPEGAI-----------YNLLI 411
T L + + G+ H ML K A +N+LI
Sbjct: 812 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 871
Query: 412 FDHCRHGNVHKAYDMYKETVHSGVEIGR 439
C +G ++ A+D+ K G+ + +
Sbjct: 872 SKCCANGEINWAFDLVKVMTSLGISLDK 899
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 18/302 (5%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V + + + +I+ G P T + L+ G C ++ + + IL+ RG+ D T+
Sbjct: 810 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 869
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI C G++ AF++ M GI D DT ++ L R R ++ + EM ++G
Sbjct: 870 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 929
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+SP Y L+N C G+ A + +EMI P ++ S A + G+
Sbjct: 930 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAES-----AMVRALAKCGK 984
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
+EA +LR M M L P + S+T ++ CK G ++A EL++ M G+ L
Sbjct: 985 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL------- 1037
Query: 275 LLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTI 334
D V+Y+ LI A+G++ A+ L EM +L + I GL + T
Sbjct: 1038 ------DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAF 1091
Query: 335 EA 336
Sbjct: 1092 SG 1093
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 181/444 (40%), Gaps = 50/444 (11%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
KA ++ M G P+ TY L+ G C+ +EA L+ + + D Y L+
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM-LREGV 155
C++G L KA + +MV + ILPD+ TY LI LCRKG+ A E R V
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRV 215
P+K +YT ++ G++ + ++M N G PD +V NA I G +G++
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD-----IVTTNAMIDGYSRMGKI 775
Query: 216 EEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI--------PL 267
E+ +L M + P++ +Y ++ G+ K + +F L + GI L
Sbjct: 776 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835
Query: 268 YEDIYQSLLDDLS--------------DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
I +S + ++ D T++ LI+ A G + A+ L M+
Sbjct: 836 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895
Query: 314 LTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTV 372
D ++ LN+ E++ L Q P R Y LI C + KT
Sbjct: 896 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI--SPESRKYIGLINGLCRVGDIKTA 953
Query: 373 V-------------------GLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFD 413
+V+ + G A +A ML P A + L+
Sbjct: 954 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 1013
Query: 414 HCRHGNVHKAYDMYKETVHSGVEI 437
C++GNV +A ++ + G+++
Sbjct: 1014 CCKNGNVIEALELRVVMSNCGLKL 1037
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 155/383 (40%), Gaps = 35/383 (9%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P+ Y + G +A ++K + M G +PD+ T +I G+ + GK+ K ++
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
+M ++ P+ TY IL+ ++ +S +F L+ ++ G+ P K L+ C
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 172 KGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
L I K F+ G+ +N I CC G + A +++ M +G+S
Sbjct: 842 SNMLEIGLK-----ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 896
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIND 291
D + ++ + ++ + EM ++GI + Y LIN
Sbjct: 897 LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS-------------PESRKYIGLING 943
Query: 292 FHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSI 351
G++ A+ ++ EM + +V S + L K EA +L+ F +
Sbjct: 944 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA--TLLLRFMLKMKLV 1001
Query: 352 PAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLI 411
P ++ TL+ C N G +A + M + K + YN+LI
Sbjct: 1002 PTIASFTTLMHLCCKN---------------GNVIEALELRVVMSNCGLKLDLVSYNVLI 1046
Query: 412 FDHCRHGNVHKAYDMYKETVHSG 434
C G++ A+++Y+E G
Sbjct: 1047 TGLCAKGDMALAFELYEEMKGDG 1069
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 138/358 (38%), Gaps = 72/358 (20%)
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
R + + Y LI + + G + + E+ M G P T ++ ++ + G
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIY 202
+ EML+ + P + L+N C +G F K+ L +M G+ +P++V Y
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY-----APTIVTY 271
Query: 203 NARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
N +H C GR + A+ +L M G+ DV +Y +I C+ K + L +M +
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331
Query: 263 KGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSV 322
+ I +EVTY+TLIN F +G ++ A L +EM +
Sbjct: 332 RMIH-------------PNEVTYNTLINGFSNEGKVLIASQLLNEMLSF----------- 367
Query: 323 RINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIE-NCSNNEFKTVVGLVKDFSM 381
GL+ P + T++ LI+ + S FK + +
Sbjct: 368 ---GLS-----------------------PNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 382 RGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGR 439
+GL P Y +L+ C++ A Y +GV +GR
Sbjct: 402 KGLT----------------PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ P+ R + ++ L V + A + + MI P + ++ + + EA
Sbjct: 930 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 989
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+LR M K L P + ++ L+ C+ G + +A E++ M + G+ D +Y +LI L
Sbjct: 990 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1049
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLM-NYYCFKGEFSKALDLPDEMINKGFLPD 193
C KG ++ AF+L+ EM +G + Y L+ + FS A + +++ +GF+
Sbjct: 1050 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITS 1109
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 198/425 (46%), Gaps = 44/425 (10%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q+ A +L M+ G+ PS+ T + L++GYC R +AV ++ M + G PD T+
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G K +A + +MV +G P+ TYG+++ LC++G + AF+L +M
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
+ + IY+ +++ C AL+L EM NK G+ P+++ Y++ I C
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK-----GVRPNVITYSSLISCLCNYE 309
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
R +A +L M + ++P+VV++ +I F K G+ V+A +L EM ++ I Y
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 274 SLLD-----DLSDE-----------------VTYSTLINDFHAQGNLMDAYCLESEMSEY 311
SL++ D DE VTY+TLIN F + + L EMS+
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 312 SYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKT 371
+ + V + I+G +A + + + + D + P TY+TL++
Sbjct: 430 GLVGNTVTYTTLIHGF-FQARDCDNAQMVFKQMVSDGVH-PNIMTYNTLLD--------- 478
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETV 431
GL K+ G KA + + +P YN++I C+ G V +D++
Sbjct: 479 --GLCKN----GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 432 HSGVE 436
GV+
Sbjct: 533 LKGVK 537
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 177/423 (41%), Gaps = 29/423 (6%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK 107
R FS Y E++ + + +A+G+ M K P + + L+ + K
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 108 AFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
+ KM GI + TY ILI CR+ ++S A L +M++ G P + L+N
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 168 YYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMAD 227
YC S A+ L D+M+ G+ PD I+ + IHG + + EA+ ++ M
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTIT-----FTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 228 MGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYST 287
G P++V+Y V+ G CK G+ AF L +M+ I IY +++D L
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 288 LINDFHAQGN------------LMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIE 335
+N F N L+ C S+ S L D+I +N T
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE----RKINPNVVTFN 334
Query: 336 AKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKM 395
A L+ F ++ + A + YD +I+ + + T L+ F M +A + M
Sbjct: 335 A---LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 396 LHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPSFTWPRPGLHFFF 455
+ + P YN LI C+ + + ++++E G+ +G T +H FF
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL-VGNTVTYTTL----IHGFF 446
Query: 456 VAQ 458
A+
Sbjct: 447 QAR 449
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 184/419 (43%), Gaps = 37/419 (8%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + +H L + +A ++ M+ RG P++ TY +++G C+ A +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L M + +V Y +I C+ A + +M +KG+ P+ TY LI LC
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
R S A L +M+ ++P+ + L++ + +G+ +A L DEMI + I
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-----SID 362
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P + Y++ I+G C+ R++EA + M P+VV+Y +I GFCK + EL
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
EM ++G+ + + VTY+TLI+ F + +A + +M +
Sbjct: 423 FREMSQRGL-------------VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 317 DVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGL 375
+ + ++GL K K +V + Q P TY+ +IE C + + L
Sbjct: 470 IMTYNTLLDGLCKNGKL--EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 376 VKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
S++G+ KP+ IYN +I CR G +A ++++ G
Sbjct: 528 FCSLSLKGV----------------KPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 149/308 (48%), Gaps = 22/308 (7%)
Query: 10 NKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADR 69
NK V P+ S + L N + A +L MI R +P+V T+N LI + + +
Sbjct: 288 NKGV--RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 70 FKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGI 129
EA + +M KR + PD+ TY LI GFC +L +A M M+ K P+ TY
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPD-EMINK 188
LI C+ R+ + +LF EM + G+ + YT L++ F +A D + +M+ K
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH------GFFQARDCDNAQMVFK 459
Query: 189 GFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
+ DG+ P+++ YN + G C G++E+A+ + + + P + +Y +I+G CK G
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 249 EPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
+ ++L + KG+ D + Y+T+I+ F +G +A L +M
Sbjct: 520 KVEDGWDLFCSLSLKGVK-------------PDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 309 SEYSYLTD 316
E L D
Sbjct: 567 REDGPLPD 574
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 192/462 (41%), Gaps = 54/462 (11%)
Query: 18 DERNLLSQ-VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
D R +L +HS+ ++D A + M+ PS+ +N+L+ + +F + +
Sbjct: 52 DYREILRNGLHSM----KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISL 107
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
M + G+S ++ TY LI FC+ ++ A + KM+ G P T L+ C
Sbjct: 108 GEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
R+S A L +M+ G P +T L++ + S+A+ L D M+ + G
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-----GCQ 222
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P+LV Y ++G C G ++ A +L M + +VV Y+ VI CK A L
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLS----------------------DEVTYSTLINDFHA 294
EM+ KG+ Y SL+ L + VT++ LI+ F
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
+G L++A L EM + S D S ING EAK +DC P
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNV 400
Query: 355 RTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLA----------HKAAKAHD---------K 394
TY+TLI C V L ++ S RGL H +A D +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 395 MLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
M+ P YN L+ C++G + KA +++ S +E
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+++KA + +Y+ P++ TYN +I G C+A + ++ + ++ +G+ PDV Y
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADT 126
+I GFC+ G +A + KM G LPD+ T
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 164/316 (51%), Gaps = 26/316 (8%)
Query: 9 NNKAVIL-DPDERNLLSQV---HSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNEL 60
N+ A++L D R ++ V + LL+V+ ++ +A+ + K MI RG SP++ TYN L
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 61 IHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGI 120
+ GYC +R EA +L M + SPD+ T+ LI G+C ++ ++ + +G+
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 121 LPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALD 180
+ +A TY IL+ C+ G++ A +LF EM+ GV P Y L++ C G+ KAL+
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 181 LPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNV 240
+ +++ K + GI V+Y I G C G+VE+A + + G+ P+V++YT +
Sbjct: 460 IFEDL-QKSKMDLGI----VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 241 IKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMD 300
I G CK G +A L +M+E G + ++ TY+TLI G+L
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDG-------------NAPNDCTYNTLIRAHLRDGDLTA 561
Query: 301 AYCLESEMSEYSYLTD 316
+ L EM + D
Sbjct: 562 SAKLIEEMKSCGFSAD 577
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 179/370 (48%), Gaps = 33/370 (8%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD S V+ + A ++L+ M R V TY+ +I CR A+ +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
++M +G+ V TY L+ G C+ GK + MV + I+P+ T+ +L+ +
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
+G+L +A +L+ EM+ G+SP+ Y LM+ YC + S+A ++ D M+ + S
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR-----NKCS 365
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P +V + + I G C++ RV++ + + R ++ GL + V+Y+ +++GFC+ G+ A EL
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 257 KLEMD------------------------EKGIPLYEDIYQSLLDDLSDEVTYSTLINDF 292
EM EK + ++ED+ +S +D V Y+T+I
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD--LGIVMYTTIIEGM 483
Query: 293 HAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIP 352
G + DA+ L + + + +V I+GL KK + EA L+R +D + P
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN-ILLRKMEEDG-NAP 541
Query: 353 AYRTYDTLIE 362
TY+TLI
Sbjct: 542 NDCTYNTLIR 551
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 194/439 (44%), Gaps = 40/439 (9%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD + + L +V +A ++ M+ G P V TYN +++G CR+ A+
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+LR M +R + DV TY +I C+ G + A + +M KGI TY L+ LC
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
+ G+ + L +M+ + P+ + L++ + +G+ +A +L EMI +G I
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG-----I 329
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
SP+++ YN + G C+ R+ EA +L M SPD+V++T++IKG+C +
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV----- 384
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLT 315
+ G+ ++ +I + L +++ VTYS L+ F G + A L EM + L
Sbjct: 385 ------DDGMKVFRNISKRGL--VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 316 DDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFK---- 370
D + + ++GL +E + + + + Y T+IE C + +
Sbjct: 437 DVMTYGILLDGLCDNGK-LEKALEIFEDLQKSKMDLGIV-MYTTIIEGMCKGGKVEDAWN 494
Query: 371 ---------------TVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHC 415
T ++ +G +A KM P YN LI H
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 416 RHGNVHKAYDMYKETVHSG 434
R G++ + + +E G
Sbjct: 555 RDGDLTASAKLIEEMKSCG 573
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 184/410 (44%), Gaps = 45/410 (10%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q + + K + + G + ++ T N +I+ +CR + A +L + K G PD T+
Sbjct: 103 QFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFN 162
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G GK+ +A + +MV G PD TY ++ +CR G S A DL +M
Sbjct: 163 TLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER 222
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
V + Y+ +++ C G A+ L EM K GI S+V YN+ + G C G
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-----GIKSSVVTYNSLVRGLCKAG 277
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
+ + +L+ M + P+V+++ ++ F K G+ +A EL EM +GI
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS------- 330
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
+ +TY+T LMD YC+++ +SE + + D ++ NK +
Sbjct: 331 ------PNIITYNT----------LMDGYCMQNRLSEANNMLDLMVR-------NKCSPD 367
Query: 334 IEAKRSLVRWF-----YQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKA 388
I SL++ + D + + + L+ N T LV+ F G A
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV-----TYSILVQGFCQSGKIKLA 422
Query: 389 AKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIG 438
+ +M+ P+ Y +L+ C +G + KA +++++ S +++G
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 157/386 (40%), Gaps = 44/386 (11%)
Query: 72 EAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILI 131
+A+ + ++M + P + + +T + + ++ GI + T I+I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 132 LTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL 191
CR + A+ + ++++ G P + L+ +G+ S+A+ L D M+ G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 192 PDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPV 251
PD +V YN+ ++G C G AL +LR M + + DV +Y+ +I C+ G
Sbjct: 191 PD-----VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 252 KAFELKLEMDEKGIPLYEDIYQSLL-----------------DDLSDE-----VTYSTLI 289
A L EM+ KGI Y SL+ D +S E +T++ L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 290 NDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCL 349
+ F +G L +A L EM + + + ++G + Q+ L
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG----------------YCMQNRL 349
Query: 350 SIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNL 409
S A D ++ N + + T L+K + M K + Y++
Sbjct: 350 S-EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 410 LIFDHCRHGNVHKAYDMYKETVHSGV 435
L+ C+ G + A ++++E V GV
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGV 434
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 155/333 (46%), Gaps = 43/333 (12%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P+ + + L ++ A + M G P+V TYN L+ G C R+ +A +
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
LRDM KR + P+V T+ LI F + GKL +A E+ M+ + PD TYG LI LC
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G L +A +F M R G P++ IYT L++ +C + + EM KG + + I+
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 197 ------------------------------PSLVIYNARIHGCCVLGRVEEALGILRGMA 226
P + YN + G C G+VE+AL I M
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYS 286
+ ++V+YT +I+G CK+G+ AF+L + KG+ + +TY+
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK-------------PNVITYT 472
Query: 287 TLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
T+I+ F +G + +A L +M E +L ++ +
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 175/409 (42%), Gaps = 45/409 (11%)
Query: 5 ASCKNNKAVIL--DPDERNLLSQVHSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYN 58
ASC K + L +PD L SLLN Y +++ A + ++ GF P+V TY
Sbjct: 137 ASCFLGKMMKLGFEPD----LVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192
Query: 59 ELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK 118
LI C+ AV + M G P+V TY L+ G C+ G+ G A + M+ +
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
I P+ T+ LI + G+L +A +L+ M++ V P + Y L+N C G +A
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYT 238
+ M +G P+ VIY IHG C RVE+ + I M+ G+ + ++YT
Sbjct: 313 RQMFYLMER-----NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 239 NVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNL 298
+I+G+C +G P A E+ +M + P D TY+ L++ G +
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAP-------------PDIRTYNVLLDGLCCNGKV 414
Query: 299 MDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYD 358
A + M + + V ++ I G+ K +A F + P TY
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG--MKPNVITYT 472
Query: 359 TLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIY 407
T+I F RGL H+A KM + P ++Y
Sbjct: 473 TMISG---------------FCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 175/419 (41%), Gaps = 40/419 (9%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
D ++ + M + G P + T N ++H C + + A L M K G PD+ T+ L
Sbjct: 100 DVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL 159
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
+ G+C ++ A + +++ G P+ TY LI LC+ L+ A +LF +M G
Sbjct: 160 LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS 219
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRV 215
P+ Y L+ C G + A L +M+ + I P+++ + A I +G++
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-----RIEPNVITFTALIDAFVKVGKL 274
Query: 216 EEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSL 275
EA + M M + PDV +Y ++I G C G +A ++ M+ G
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC---------- 324
Query: 276 LDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIE 335
+EV Y+TLI+ F + D + EMS+ + + + +V I G
Sbjct: 325 ---YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 336 AKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGL---------- 384
A+ + + + P RTY+ L++ C N + + + + + R +
Sbjct: 382 AQEVFNQMSSRR--APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 385 ---AHKAAKAHD------KMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
K K D + KP Y +I CR G +H+A ++K+ G
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 159/328 (48%), Gaps = 33/328 (10%)
Query: 33 YQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTY 92
Y+ DK ++LK M G P+V +Y LI+ C+ + EA + RDM RG+SP V Y
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIY 532
Query: 93 YPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLR 152
LI G C GK+ AF +M+ KGI + TY LI L G+LS+A DL LE+ R
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 153 EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVL 212
+G+ P + Y L++ Y F G + + L +EM GI P+L Y+ I C
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR-----SGIKPTLKTYHLLISLC--- 644
Query: 213 GRVEEALGIL-RGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDI 271
+E + + R +M L PD++ Y V+ + G+ KAF L+ +M EK I L +
Sbjct: 645 --TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTT 702
Query: 272 YQSLL------------DDLSDEV----------TYSTLINDFHAQGNLMDAYCLESEMS 309
Y SL+ L DE+ TY+ ++ + M AY EM
Sbjct: 703 YNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQ 762
Query: 310 EYSYLTDDVISSVRINGLNKKATTIEAK 337
E +L D I + ++GL ++ + EA+
Sbjct: 763 EKGFLLDVCIGNELVSGLKEEWRSKEAE 790
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 181/415 (43%), Gaps = 74/415 (17%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+++L +++KA +L + +G P+ YN +I GYCR A + M K+G+
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD Y LI FC+ G++ A + KM KG+ P +TY ILI RK K FD
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
+ EM G P+ Y L+N C KG SK L+ +++ + G+SP + IYN
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLC-KG--SKLLEA--QIVKRDMEDRGVSPKVRIYNML 535
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
I GCC G++E+A + M G+ ++V+Y +I G G+ +A +L LE+ KG+
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 266 PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRIN 325
D TY++LI+ + GN+ L EM
Sbjct: 596 K-------------PDVFTYNSLISGYGFAGNVQRCIALYEEM----------------- 625
Query: 326 GLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLA 385
KRS ++ P +TY LI C+ + L + S+
Sbjct: 626 -----------KRSGIK---------PTLKTYHLLISLCTKEGIELTERLFGEMSL---- 661
Query: 386 HKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRA 440
KP+ +YN ++ + HG++ KA+++ K+ + + + +
Sbjct: 662 ---------------KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKT 701
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 164/402 (40%), Gaps = 37/402 (9%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+ +A ++ + G PS + L+ + +F+ + + ++ + P Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
I + +GK E+ +M H I P Y +LI LC+ R++ A LF EML
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+ P Y L++ YC G K+ + + M D I PSL+ +N + G G
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERM-----KADHIEPSLITFNTLLKGLFKAGM 299
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
VE+A +L+ M D+G PD +++ + G+ E E + +YE S
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN-----------EKAEAALGVYETAVDS 348
Query: 275 LLDDLSDEVTYSTLINDFHAQGNLMDA-YCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
+ + T S L+N +G + A L EM++ + ++VI + I+G +K
Sbjct: 349 GVK--MNAYTCSILLNALCKEGKIEKAEEILGREMAK-GLVPNEVIYNTMIDGYCRKGDL 405
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHD 393
+ A+ + Q D L NC L++ F G A K +
Sbjct: 406 VGARMKIEAMEKQGM-------KPDHLAYNC----------LIRRFCELGEMENAEKEVN 448
Query: 394 KMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
KM P YN+LI + R K +D+ KE +G
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 200/494 (40%), Gaps = 78/494 (15%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P +L + L+ Q N+ ++ F PS Y + I + + + +
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
M + P V Y LI G C+ ++ A ++ +M+ + +LP TY LI C+
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G K+F + M + + P + L+ G A ++ EM + GF+PD +
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321
Query: 197 PSLV---------------IYNARI--------HGCCVL-------GRVEEALGIL-RGM 225
S++ +Y + + C +L G++E+A IL R M
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 226 ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE-MDEKGIPLYEDIYQSL--------- 275
A GL P+ V Y +I G+C+ G+ V A +K+E M+++G+ Y L
Sbjct: 382 AK-GLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAMEKQGMKPDHLAYNCLIRRFCELGE 439
Query: 276 LDDLSDEV-------------TYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSV 322
+++ EV TY+ LI + + + + EM + + + V
Sbjct: 440 MENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGT 499
Query: 323 RINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSM 381
IN L K + +EA+ +V+ +D P R Y+ LI+ CS + + K+
Sbjct: 500 LINCLCKGSKLLEAQ--IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 382 RG----------------LAHKAAKAHDKMLH---GNYKPEGAIYNLLIFDHCRHGNVHK 422
+G + K ++A D +L KP+ YN LI + GNV +
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617
Query: 423 AYDMYKETVHSGVE 436
+Y+E SG++
Sbjct: 618 CIALYEEMKRSGIK 631
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
++KA N+ K MI + TYN LI G + + E ++ +M R + P+ DTY
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM 150
++ G C+ A+ +M KG L D L+ L + R +A + EM
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 156/328 (47%), Gaps = 20/328 (6%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
VD+A ++ M+ RG P + TYN +I G C+ A ++R++ +G PDV +Y
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
L+ GK + ++ KM + P+ TY ILI TLCR G++ +A +L M +G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
++P Y Y L+ +C +G A++ + MI+ G LPD +V YN + C G+
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD-----IVNYNTVLATLCKNGK 418
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
++AL I + ++G SP+ SY + G+ ++A + LEM GI
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID-------- 470
Query: 275 LLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTI 334
DE+TY+++I+ +G + +A+ L +M + V ++ + G K
Sbjct: 471 -----PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 525
Query: 335 EAKRSLVRWFYQDCLSIPAYRTYDTLIE 362
+A L C P TY LIE
Sbjct: 526 DAINVLESMVGNGCR--PNETTYTVLIE 551
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 128/254 (50%), Gaps = 5/254 (1%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ +LLN + ++ ++ M P+V TY+ LI CR + +EA+ +L+ M ++GL
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
+PD +Y PLI FC+ G+L A E M+ G LPD Y ++ TLC+ G+ +A +
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
+F ++ G SP+ Y + + G+ +AL + EM++ G PD I+ YN+
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEIT-----YNSM 479
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
I C G V+EA +L M P VV+Y V+ GFCK A + M G
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 266 PLYEDIYQSLLDDL 279
E Y L++ +
Sbjct: 540 RPNETTYTVLIEGI 553
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 171/406 (42%), Gaps = 41/406 (10%)
Query: 41 MLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFC 100
+L+ M+ +G++P V +LI G+ +AV ++ + K G PDV Y LI GFC
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 169
Query: 101 QTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKY 160
+ ++ A + +M K PD TY I+I +LC +G+L A + ++L + P
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 161 IYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALG 220
YT L+ +G +AL L DEM+++G PD + YN I G C G V+ A
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPD-----MFTYNTIIRGMCKEGMVDRAFE 284
Query: 221 ILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS 280
++R + G PDV+SY +++ G+ E+G L ++ D
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKW-----------EEGEKLMTKMFSEKCD--P 331
Query: 281 DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSL 340
+ VTYS LI G + +A L M E D I ++ A L
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 341 VRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAA---------- 389
CL P Y+T++ C N + + + G + ++
Sbjct: 392 ETMISDGCL--PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 390 KAHDK---------MLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDM 426
+ DK M+ P+ YN +I CR G V +A+++
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 177/443 (39%), Gaps = 63/443 (14%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P V YN LI+G+C+ +R +A +L M + SPD TY +I C GKL A ++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
+++ P TY ILI +G + +A L EML G+ P + Y ++ C
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 172 KGEFSKALDLPDEMINKGFLPDGIS------------------------------PSLVI 201
+G +A ++ + KG PD IS P++V
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 202 YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMD 261
Y+ I C G++EEA+ +L+ M + GL+PD SY +I FC+ G A E M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 262 EKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISS 321
G L D V Y+T++ G A + ++ E + +
Sbjct: 396 SDGC-------------LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 322 VRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSM 381
+ L I A ++ P TY+++I +C E
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGI--DPDEITYNSMI-SCLCRE------------- 486
Query: 382 RGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAE 441
G+ +A + M + P YN+++ C+ + A ++ + V +G E
Sbjct: 487 -GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN--E 543
Query: 442 PSFTWPRPGLHFF-FVAQAWPVA 463
++T G+ F + A+A +A
Sbjct: 544 TTYTVLIEGIGFAGYRAEAMELA 566
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 162/369 (43%), Gaps = 36/369 (9%)
Query: 59 ELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK 118
++ H CR+ + E++ +L M ++G +PDV LI GF + KA + +++ K
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEK 152
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
PD Y LI C+ R+ A + M + SP Y ++ C +G+
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK---- 208
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYT 238
LDL +++N+ L D P+++ Y I + G V+EAL ++ M GL PD+ +Y
Sbjct: 209 LDLALKVLNQ-LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 239 NVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNL 298
+I+G CK G +AFE+ ++ KG D ++Y+ L+ QG
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCE-------------PDVISYNILLRALLNQGKW 314
Query: 299 MDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYD 358
+ L ++M + V S+ I L + IE +L++ + L+ AY +YD
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG-KIEEAMNLLKLMKEKGLTPDAY-SYD 372
Query: 359 TLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHG 418
LI F G A + + M+ P+ YN ++ C++G
Sbjct: 373 PLI---------------AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 419 NVHKAYDMY 427
+A +++
Sbjct: 418 KADQALEIF 426
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 90/230 (39%), Gaps = 31/230 (13%)
Query: 207 HGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIP 266
H C G E+L +L M G +PDV+ T +IKGF + KA + +++ G P
Sbjct: 97 HRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP 156
Query: 267 LYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRING 326
D Y+ LIN F + DA + M + D V ++ I
Sbjct: 157 --------------DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 202
Query: 327 LNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAH 386
L + A + L + +C P TY LIE + G
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQ--PTVITYTILIEATM---------------LEGGVD 245
Query: 387 KAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
+A K D+ML KP+ YN +I C+ G V +A++M + G E
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE 295
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 130/243 (53%), Gaps = 5/243 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+D A N+ M ++GF + TYN LI G+C A R+ + +LRDM KR +SP+V T+
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI F + GKL +A ++ +M+ +GI P+ TY LI C++ RL +A + M+ +
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G P + L+N YC L+L EM +G + + ++ YN + G C G
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT-----YNTLVQGFCQSG 452
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
++E A + + M + PD+VSY ++ G C GE KA E+ ++++ + L IY
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 274 SLL 276
++
Sbjct: 513 III 515
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 188/426 (44%), Gaps = 43/426 (10%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD + ++ L +V +A ++ M+ G P++ T N L++G C + +AV
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
++ M + G P+ TY P++ C++G+ A E+ KM + I DA Y I+I LC
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
+ G L AF+LF EM +G Y L+ +C G + L +MI + I
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-----KI 329
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
SP++V ++ I G++ EA +L+ M G++P+ ++Y ++I GFCK +A +
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLT 315
+ M KG D +T++ LIN + + D L EMS +
Sbjct: 390 MVDLMISKGCD-------------PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 316 DDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLS---IPAYRTYDTLIEN-CSNNEFKT 371
+ V + + G + K + + +Q+ +S P +Y L++ C N E
Sbjct: 437 NTVTYNTLVQGFCQ-----SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL-- 489
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETV 431
KA + K+ + + IY ++I C V A+D++
Sbjct: 490 --------------EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 535
Query: 432 HSGVEI 437
GV++
Sbjct: 536 LKGVKL 541
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 177/389 (45%), Gaps = 35/389 (8%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G+ P +N L++G C R EA+ ++ M + G P + T L+ G C GK+ A
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ +MV G P+ TYG ++ +C+ G+ + A +L +M + Y+ +++
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
C G A +L +EM KGF D ++ YN I G C GR ++ +LR M
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKAD-----IITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
+SP+VV+++ +I F K G+ +A +L EM ++GI + +TY++L
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA-------------PNTITYNSL 374
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDC 348
I+ F + L +A + M D + ++ ING KA I+ L R
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC-KANRIDDGLELFREMSLRG 433
Query: 349 LSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYN 408
+ I TY+TL++ F G A K +M+ +P+ Y
Sbjct: 434 V-IANTVTYNTLVQG---------------FCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 409 LLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
+L+ C +G + KA +++ + S +E+
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 182/422 (43%), Gaps = 49/422 (11%)
Query: 40 NMLKYMIVRGFSP---SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
N L + RGFS +Y + + + +AV + RDM + P V + L
Sbjct: 36 NELLFCCERGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLF 95
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
+T + + +M KGI T I+I CR +LS AF ++++ G
Sbjct: 96 SAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYE 155
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P I+ L+N C + S+AL+L D M+ G P+L+ N ++G C+ G+V
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH-----KPTLITLNTLVNGLCLNGKVS 210
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
+A+ ++ M + G P+ V+Y V+ CK G+ A EL +M+E+ I L Y ++
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 277 DDL----------------------SDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
D L +D +TY+TLI F G D L +M +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 315 TDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVV 373
+ V SV I+ K+ EA + L++ Q ++ P TY++LI+ C N + +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQ-LLKEMMQRGIA-PNTITYNSLIDGFCKENRLEEAI 388
Query: 374 GLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHS 433
+V D M+ P+ +N+LI +C+ + ++++E
Sbjct: 389 QMV----------------DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 434 GV 435
GV
Sbjct: 433 GV 434
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 144/299 (48%), Gaps = 20/299 (6%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ S + ++ +A +LK M+ RG +P+ TYN LI G+C+ +R +EA+ ++ M +G
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD+ T+ LI G+C+ ++ E+ +M +G++ + TY L+ C+ G+L A
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
LF EM+ V P Y L++ C GE KAL++ + I K + I IY
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK-IEKSKMELDIG----IYMII 514
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
IHG C +V++A + + G+ D +Y +I C+ KA L +M E+G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG- 573
Query: 266 PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRI 324
DE+TY+ LI + A L EM + D +S+V++
Sbjct: 574 ------------HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPAD--VSTVKM 618
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 18/256 (7%)
Query: 1 MMITASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNEL 60
+MI+ C DPD ++ ++D + + M +RG + TYN L
Sbjct: 393 LMISKGC--------DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 61 IHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGI 120
+ G+C++ + + A + ++M R + PD+ +Y L+ G C G+L KA E+ K+ +
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 121 LPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALD 180
D Y I+I +C ++ A+DLF + +GV Y +++ C K SKA
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 181 LPDEMINKGFLPDGISPSLVIYNARIHGCCVLG--RVEEALGILRGMADMGLSPDVVSYT 238
L +M +G PD ++ +++I R H LG A ++ M G DV +
Sbjct: 565 LFRKMTEEGHAPDELTYNILI---RAH----LGDDDATTAAELIEEMKSSGFPADVSTVK 617
Query: 239 NVIKGFCKIGEPVKAF 254
VI GE K+F
Sbjct: 618 MVINMLSS-GELDKSF 632
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 176/402 (43%), Gaps = 30/402 (7%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V+ A + + M RG P TYN +I G+ + R + V +M PDV TY
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI FC+ GKL E +M G+ P+ +Y L+ C++G + +A +++M R G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+ P++Y YT L++ C G S A L +EM L G+ ++V Y A I G C R
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEM-----LQVGVEWNVVTYTALIDGLCDAER 452
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
++EA + M G+ P++ SY +I GF K +A EL E+ +GI +Y +
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 275 LLDDL----------------------SDEVTYSTLINDFHAQGNLMDAYCLESEMSEYS 312
+ L ++ + Y+TL++ + GN + L EM E
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 313 YLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKT 371
V V I+GL K +A R L A + +I+ C +N+ +
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA-AIFTAMIDGLCKDNQVEA 631
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFD 413
L + +GL A+ ++ GN+K + L + D
Sbjct: 632 ATTLFEQMVQKGLVPDRT-AYTSLMDGNFKQGNVLEALALRD 672
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 151/333 (45%), Gaps = 20/333 (6%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
+ V L P+E S + + + + A + M+ G +V TY LI G C A+R
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
KEA + M G+ P++ +Y LI GF + + +A E+ ++ +GI PD YG
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
I LC ++ A + EM G+ + IYT LM+ Y G ++ L L DEM
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL-- 571
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA-DMGLSPDVVSYTNVIKGFCKIGE 249
I ++V + I G C V +A+ ++ D GL + +T +I G CK +
Sbjct: 572 ---DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 250 PVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMS 309
A L +M +KG+ + D Y++L++ QGN+++A L +M+
Sbjct: 629 VEAATTLFEQMVQKGL-------------VPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 310 EYSYLTDDVISSVRINGLNKKATTIEAKRSLVR 342
E D + + + GL+ ++ RS +
Sbjct: 676 EIGMKLDLLAYTSLVWGLS-HCNQLQKARSFLE 707
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 5/230 (2%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P + N L+H + + + + +DM G P V TY +I C+ G + A +
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
+M +G++PD TY +I + GRL F EM P Y L+N +C
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 172 KGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
G+ L+ EM KG +G+ P++V Y+ + C G +++A+ M +GL
Sbjct: 345 FGKLPIGLEFYREM--KG---NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD 281
P+ +YT++I CKIG AF L EM + G+ Y +L+D L D
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 157/385 (40%), Gaps = 35/385 (9%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P ++ L +EA+ M + + P + L+ F + GK
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
M+ G P TY I+I +C++G + A LF EM G+ P Y +++ +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 172 KGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
G + +EM + PD I+ YNA I+ C G++ L R M GL
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVIT-----YNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIND 291
P+VVSY+ ++ FCK G +A + ++M G+ + +E TY++LI+
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL-------------VPNEYTYTSLIDA 411
Query: 292 FHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSI 351
GNL DA+ L +EM + + V + I+GL EA+ + I
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGK--MDTAGVI 469
Query: 352 PAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLI 411
P +Y+ LI G VK +M +A + +++ KP+ +Y I
Sbjct: 470 PNLASYNALIH-----------GFVKAKNM----DRALELLNELKGRGIKPDLLLYGTFI 514
Query: 412 FDHCRHGNVHKAYDMYKETVHSGVE 436
+ C + A + E G++
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIK 539
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 54/328 (16%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ L + ++ +A + M G P++A+YN LIHG+ +A A+ +L ++ RG+
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGI---------LPDA------------ 124
PD+ Y I G C K+ A + +M GI L DA
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 125 --------------DTYGILILTLCRKGRLSKAFDLFLEMLRE-GVSPHKYIYTRLMNYY 169
T+ +LI LC+ +SKA D F + + G+ + I+T +++
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
C + A L ++M+ KG +PD + Y + + G G V EAL + MA++G
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTA-----YTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 230 LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLI 289
+ D+++YT+++ G + KA EM +GI DEV +++
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH-------------PDEVLCISVL 725
Query: 290 NDFHAQGNLMDAYCLESEMSEYSYLTDD 317
+ G + +A L+S + ++ LT D
Sbjct: 726 KKHYELGCIDEAVELQSYLMKHQLLTSD 753
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 186/425 (43%), Gaps = 44/425 (10%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q+ A +L M+ G+ PS+ T + L++GYC R +AV ++ M + G PD T+
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G K +A + +MV +G P+ TYG+++ LC++G + AF+L +M
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
+ I+ +++ C AL+L EM K GI P++V Y++ I C G
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-----GIRPNVVTYSSLISCLCSYG 234
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
R +A +L M + ++P++V++ +I F K G+ V+A +L +M ++ I Y
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 274 SLL----------------------DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEY 311
SL+ D D TY+TLI F + D L EMS
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 312 SYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKT 371
+ D V + I GL A++ + + D + P TY L++ NN
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQK-VFKQMVSDGVP-PDIMTYSILLDGLCNN---- 408
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETV 431
G KA + D M K + IY +I C+ G V +D++
Sbjct: 409 -----------GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 432 HSGVE 436
GV+
Sbjct: 458 LKGVK 462
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 137/279 (49%), Gaps = 18/279 (6%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A +L MI + +P++ T+N LI + + +F EA + DM KR + PD+ TY LI
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
GFC +L KA +M MV K PD DTY LI C+ R+ +LF EM G+
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
YT L+ G+ A + +M++ DG+ P ++ Y+ + G C G++E+
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVS-----DGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
AL + M + D+ YT +I+G CK G+ ++L + KG+
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK----------- 462
Query: 278 DLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
+ VTY+T+I+ ++ L +AY L +M E L D
Sbjct: 463 --PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 181/409 (44%), Gaps = 40/409 (9%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G S ++ TYN LI+ +CR + A+ +L M K G P + T L+ G+C ++ A
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ +MV G PD T+ LI L + S+A L M++ G P+ Y ++N
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 159
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
C +G+ A +L ++M I +VI+N I C V++AL + + M
Sbjct: 160 LCKRGDIDLAFNLLNKM-----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
G+ P+VV+Y+++I C G A +L +M EK I + VT++ L
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN-------------PNLVTFNAL 261
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDC 348
I+ F +G ++A L +M + S D + ING +AK+ +DC
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 349 LSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLA-------------------HKA 388
P TY+TLI+ C + + L ++ S RGL A
Sbjct: 322 F--PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 389 AKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
K +M+ P+ Y++L+ C +G + KA +++ S +++
Sbjct: 380 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 181/419 (43%), Gaps = 37/419 (8%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + +H L + +A ++ M+ RG P++ TY +++G C+ A +
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L M + DV + +I C+ + A + +M KGI P+ TY LI LC
Sbjct: 173 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
GR S A L +M+ + ++P+ + L++ + +G+F +A L D+MI + I
Sbjct: 233 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS-----ID 287
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P + YN+ I+G C+ R+++A + M PD+ +Y +IKGFCK EL
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
EM +G+ + D VTY+TLI G+ +A + +M D
Sbjct: 348 FREMSHRGL-------------VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 317 DVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGL 375
+ S+ ++GL +E + + + + + Y Y T+IE C + L
Sbjct: 395 IMTYSILLDGLCNNGK-LEKALEVFDYMQKSEIKLDIY-IYTTMIEGMCKAGKVDDGWDL 452
Query: 376 VKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
S++G+ KP YN +I C + +AY + K+ G
Sbjct: 453 FCSLSLKGV----------------KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 125/246 (50%), Gaps = 5/246 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DPD S ++ ++DKA M ++M+ + P + TYN LI G+C++ R ++
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ R+M+ RGL D TY LI G G A ++ +MV G+ PD TY IL+ L
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C G+L KA ++F M + + YIYT ++ C G+ DL + K G
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-----G 460
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ P++V YN I G C ++EA +L+ M + G PD +Y +I+ + G+ +
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 520
Query: 255 ELKLEM 260
EL EM
Sbjct: 521 ELIREM 526
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 160/378 (42%), Gaps = 44/378 (11%)
Query: 80 MAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
M K P + + L+ + K + KM GI + TY ILI CR+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
+S A L +M++ G P + L+N YC S A+ L D+M+ G+ PD I+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT--- 117
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
+ IHG + + EA+ ++ M G P++V+Y V+ G CK G+ AF L +
Sbjct: 118 --FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 175
Query: 260 MDEKGIPLYEDIYQSLLDDLS----------------------DEVTYSTLINDFHAQGN 297
M+ I I+ +++D L + VTYS+LI+ + G
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 298 LMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTY 357
DA L S+M E +N T A L+ F ++ + A + +
Sbjct: 236 WSDASQLLSDMIE--------------KKINPNLVTFNA---LIDAFVKEGKFVEAEKLH 278
Query: 358 DTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRH 417
D +I+ + + T L+ F M KA + + M+ + P+ YN LI C+
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 418 GNVHKAYDMYKETVHSGV 435
V ++++E H G+
Sbjct: 339 KRVEDGTELFREMSHRGL 356
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ L + D A + K M+ G P + TY+ L+ G C + ++A+ + M K +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
D+ Y +I G C+ GK+ +++ + KG+ P+ TY +I LC K L +A+
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
L +M +G P Y L+ + G+ + + +L EM + F+ D + LV
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
+ + + +VD ++ + ++G P+V TYN +I G C +EA +L+ M +
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 494
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
G PD TY LI + G + E+ +M + DA T G L+ + GRL K+
Sbjct: 495 GPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS 553
Query: 144 FDLFLEML 151
FL+ML
Sbjct: 554 ---FLDML 558
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 194/440 (44%), Gaps = 44/440 (10%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P+ + +H L + +A ++ M+ RG P + TY +++G C+ A+ +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L+ M K + DV Y +I C + A + +M +KGI P+ TY LI LC
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
GR S A L +M+ ++P+ ++ L++ + +G+ +A L DEMI + I
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-----ID 357
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P + Y++ I+G C+ R++EA + M P+VV+Y +IKGFCK + EL
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
EM ++G+ + + VTY+TLI G+ A + +M D
Sbjct: 418 FREMSQRGL-------------VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 317 DVISSVRINGLNKKATTIEAKRSLVRWFY-QDCLSIPAYRTYDTLIEN------------ 363
+ S+ ++GL K + +++LV + Y Q P TY+ +IE
Sbjct: 465 IITYSILLDGLCKYG---KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 364 --CSNNEFKTV-------VGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDH 414
CS + K V ++ F +GL +A +M P YN LI
Sbjct: 522 LFCSLS-LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Query: 415 CRHGNVHKAYDMYKETVHSG 434
R G+ + ++ KE G
Sbjct: 581 LRDGDKAASAELIKEMRSCG 600
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 200/461 (43%), Gaps = 82/461 (17%)
Query: 16 DPDERNLLSQVHSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFK 71
+PD + + SLLN Y ++ +A ++ M V + P+ T+N LIHG ++
Sbjct: 147 EPD----IVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 72 EAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMV--------------- 116
EAV ++ M RG PD+ TY ++ G C+ G + A + KM
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 117 --------------------HKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
+KGI P+ TY LI LC GR S A L +M+ ++
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P+ ++ L++ + +G+ +A L DEMI + I P + Y++ I+G C+ R++
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-----SIDPDIFTYSSLINGFCMHDRLD 377
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
EA + M P+VV+Y +IKGFCK + EL EM ++G+
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL----------- 426
Query: 277 DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEA 336
+ + VTY+TLI G+ A + +M D + S+ ++GL K +
Sbjct: 427 --VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG---KL 481
Query: 337 KRSLVRWFY-QDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDK 394
+++LV + Y Q P TY+ +IE C + + L S++G+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV---------- 531
Query: 395 MLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
KP IY +I CR G +A +++E G
Sbjct: 532 ------KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 191/412 (46%), Gaps = 53/412 (12%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q+ A +L M+ G+ P + T + L++GYC R EAV ++ M P+ T+
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G K +A + +MV +G PD TYG ++ LC++G + A L +M +
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
+ IYT +++ C + AL+L EM NK GI P++V YN+ I C G
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-----GIRPNVVTYNSLIRCLCNYG 304
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
R +A +L M + ++P+VV+++ +I F K G+ V+A +L EM ++ I DI+
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIF- 361
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISS------VRINGL 327
TYS+LIN F C+ + E ++ + +IS V N L
Sbjct: 362 ----------TYSSLINGF----------CMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 328 NK---KATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGL 384
K KA +E L R Q L + TY+TLI+ GL + G
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYNTLIQ-----------GLFQ----AGD 445
Query: 385 AHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
A K KM+ P+ Y++L+ C++G + KA +++ S +E
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 19/288 (6%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DPD S ++ ++D+A +M + MI + P+V TYN LI G+C+A R +E +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ R+M++RGL + TY LI G Q G A ++ KMV G+ PD TY IL+ L
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C+ G+L KA +F + + + P Y Y ++ C G+ DL + K G
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-----G 530
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ P+++IY I G C G EEA + R M + G P+ +Y +I+ + G+ +
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAY 302
EL EM G + D T S +IN H G L +Y
Sbjct: 591 ELIKEMRSCGF-------------VGDASTISMVINMLH-DGRLEKSY 624
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 149/314 (47%), Gaps = 18/314 (5%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++P+ + + + + ++ +A + MI R P + TY+ LI+G+C DR EA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ M + P+V TY LI GFC+ ++ + E+ +M +G++ + TY LI L
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ G A +F +M+ +GV P Y+ L++ C G+ KAL ++ +
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL-----VVFEYLQKSK 495
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ P + YN I G C G+VE+ + ++ G+ P+V+ YT +I GFC+ G +A
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
L EM E G L + TY+TLI G+ + L EM ++
Sbjct: 556 ALFREMKEDGT-------------LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 315 TDDVISSVRINGLN 328
D S+ IN L+
Sbjct: 603 GDASTISMVINMLH 616
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 165/334 (49%), Gaps = 22/334 (6%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
KA +LK M+ SP++ T+N LI G+ + D ++ + ++M + + P+V +Y LI
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
G C GK+ +A M+ KMV G+ P+ TY LI C+ L +A D+F + +G
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P +Y L++ YC G+ L +EM +G +PD + YN I G C G +E
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD-----VGTYNCLIAGLCRNGNIE 453
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
A + + GL PD+V++ +++G+C+ GE KA L EM + G+
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK---------- 502
Query: 277 DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVIS-SVRINGLNKKATTIE 335
+TY+ ++ + +GNL A + ++M + L +V S +V + G ++K +E
Sbjct: 503 ---PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG-KLE 558
Query: 336 AKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEF 369
L+ + L +P TY+ + E + F
Sbjct: 559 DANMLLNEMLEKGL-VPNRITYEIVKEEMVDQGF 591
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 168/388 (43%), Gaps = 76/388 (19%)
Query: 43 KYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQT 102
K MI R P+V T+N +I+ C+ + +A ++ DM G SP+V +Y LI G+C+
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 103 GKLGKAFEMKA---KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHK 159
G GK ++ A +MV + P+ T+ ILI + L + +F EML + V P+
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 160 YIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEAL 219
Y L+N C G+ S+A+ + D+M++ G+ P+L+ YNA I+G C ++EAL
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSA-----GVQPNLITYNALINGFCKNDMLKEAL 386
Query: 220 GILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
+ + G P Y +I +CK+G+ F LK EM+ +GI +
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI-------------V 433
Query: 280 SDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRS 339
D TY+ LI GN IEA +
Sbjct: 434 PDVGTYNCLIAGLCRNGN------------------------------------IEAAKK 457
Query: 340 LVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHG 398
L L P T+ L+E C E + L+K+ S GL
Sbjct: 458 LFDQLTSKGL--PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL-------------- 501
Query: 399 NYKPEGAIYNLLIFDHCRHGNVHKAYDM 426
KP YN+++ +C+ GN+ A +M
Sbjct: 502 --KPRHLTYNIVMKGYCKEGNLKAATNM 527
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 7/260 (2%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
S ++ L N ++ +A +M M+ G P++ TYN LI+G+C+ D KEA+ + + +
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
G P Y LI +C+ GK+ F +K +M +GI+PD TY LI LCR G + A
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
LF ++ +G+ P + LM YC KGE KA L EM G+ P + YN
Sbjct: 456 KKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKM-----GLKPRHLTYN 509
Query: 204 ARIHGCCVLGRVEEALGILRGM-ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
+ G C G ++ A + M + L +V SY +++G+ + G+ A L EM E
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 263 KGIPLYEDIYQSLLDDLSDE 282
KG+ Y+ + +++ D+
Sbjct: 570 KGLVPNRITYEIVKEEMVDQ 589
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 161/394 (40%), Gaps = 80/394 (20%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G+ S + L+ + +R + + ++M +R + P+V T+ +I C+TGK+ KA
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCR---KGRLSKAFDLFLEMLREGVSPHKYIYTRL 165
++ M G P+ +Y LI C+ G++ KA + EM+ VSP+ + L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 166 MNYYCFKGEFSKALDLPDEM-INKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
++ F K +LP M + K L + P+++ YN+ I+G C G++ EA+ +
Sbjct: 303 ID------GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG-IPLYEDIYQSLLDDLSDEV 283
M G+ P++++Y +I GFCK +A ++ + +G +P
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR-------------- 402
Query: 284 TYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRW 343
Y+ LI+ + G + D + L+ EM
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGI------------------------------ 432
Query: 344 FYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKP 402
+P TY+ LI C N + L + +GL P
Sbjct: 433 -------VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-----------------P 468
Query: 403 EGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
+ +++L+ +CR G KA + KE G++
Sbjct: 469 DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 18/161 (11%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++ A + + +G P + T++ L+ GYCR ++A +L++M+K GL P TY
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 94 PLICGFCQTGKLGKAFEMKAKM-VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLR 152
++ G+C+ G L A M+ +M + + + +Y +L+ +KG+L A L EML
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 153 EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
+G+ P++ Y E K +EM+++GF+PD
Sbjct: 570 KGLVPNRITY-----------EIVK-----EEMVDQGFVPD 594
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 185/425 (43%), Gaps = 44/425 (10%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q+ A +L M+ G+ PS+ T + L++GYC R +AV ++ M + G PD T+
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G K +A + +MV +G P+ TYG+++ LC++G A +L +M
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
+ I+ +++ C AL+L EM K GI P++V Y++ I C G
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-----GIRPNVVTYSSLISCLCSYG 309
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
R +A +L M + ++P++V++ +I F K G+ V+A +L +M ++ I Y
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 274 SLL----------------------DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEY 311
SL+ D D VTY+TLI F + D L EMS
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 312 SYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKT 371
+ D V + I GL A++ + + D + P TY L++ NN
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQK-VFKQMVSDGVP-PDIMTYSILLDGLCNN---- 483
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETV 431
G KA + D M K + IY +I C+ G V +D++
Sbjct: 484 -----------GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 432 HSGVE 436
GV+
Sbjct: 533 LKGVK 537
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 186/433 (42%), Gaps = 40/433 (9%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + +H L + +A ++ M+ RG P++ TY +++G C+ A+ +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L M + DV + +I C+ + A + +M KGI P+ TY LI LC
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
GR S A L +M+ + ++P+ + L++ + +G+F +A L D+MI + I
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-----SID 362
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P + YN+ ++G C+ R+++A + M PDVV+Y +IKGFCK EL
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
EM +G+ + D VTY+TLI G+ +A + +M D
Sbjct: 423 FREMSHRGL-------------VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 317 DVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGL 375
+ S+ ++GL +E + + + + + Y Y T+IE C + L
Sbjct: 470 IMTYSILLDGLCNNG-KLEKALEVFDYMQKSEIKLDIY-IYTTMIEGMCKAGKVDDGWDL 527
Query: 376 VKDFSMRG-------------------LAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCR 416
S++G L +A KM P YN LI H R
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Query: 417 HGNVHKAYDMYKE 429
G+ + ++ +E
Sbjct: 588 DGDKAASAELIRE 600
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 125/246 (50%), Gaps = 5/246 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DPD S V+ ++DKA M ++M+ + P V TYN LI G+C++ R ++
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ R+M+ RGL D TY LI G G A ++ +MV G+ PD TY IL+ L
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C G+L KA ++F M + + YIYT ++ C G+ DL + K G
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-----G 535
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ P++V YN I G C ++EA +L+ M + G P+ +Y +I+ + G+ +
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 595
Query: 255 ELKLEM 260
EL EM
Sbjct: 596 ELIREM 601
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 171/410 (41%), Gaps = 44/410 (10%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK 107
R FS Y E++ + +A+G+ M K P + + L+ + K
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 108 AFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
+ KM I+ TY ILI CR+ ++S A L +M++ G P + L+N
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 168 YYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMAD 227
YC S A+ L D+M+ G+ PD I+ + IHG + + EA+ ++ M
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTIT-----FTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 228 MGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS------- 280
G P++V+Y V+ G CK G+ A L +M+ I I+ +++D L
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 281 ---------------DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRIN 325
+ VTYS+LI+ + G DA L S+M E
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE--------------K 324
Query: 326 GLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLA 385
+N T A L+ F ++ + A + YD +I+ + + T LV F M
Sbjct: 325 KINPNLVTFNA---LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 386 HKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
KA + + M+ + P+ YN LI C+ V ++++E H G+
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 131/280 (46%), Gaps = 18/280 (6%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
+A + MI R P + TYN L++G+C DR +A + M + PDV TY LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
GFC++ ++ E+ +M H+G++ D TY LI L G A +F +M+ +GV
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P Y+ L++ C G+ KAL++ D M I + IY I G C G+V+
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYM-----QKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
+ + ++ G+ P+VV+Y +I G C +A+ L +M E G
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG------------ 570
Query: 277 DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
L + TY+TLI G+ + L EM ++ D
Sbjct: 571 -PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ L + D A + K M+ G P + TY+ L+ G C + ++A+ + M K +
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
D+ Y +I G C+ GK+ +++ + KG+ P+ TY +I LC K L +A+
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
L +M +G P+ Y L+ + G+ + + +L EM + F+ D + LV
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
+ + + +VD ++ + ++G P+V TYN +I G C +EA +L+ M +
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
G P+ TY LI + G + E+ +M + DA T G L+ + GRL K+
Sbjct: 570 GPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS 628
Query: 144 FDLFLEML 151
FL+ML
Sbjct: 629 ---FLDML 633
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 191/439 (43%), Gaps = 50/439 (11%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCR---ADRFKEAVGILRDMAKRGLSPDVDTYYP 94
A + + MI P++ T N L+ G R + A + DM K G+S +V T+
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 95 LICGFCQTGKLGKAFEMKAKMVHK-GILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ G+C GKL A M +MV + + PD TY ++ + +KGRLS +L L+M +
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ P++ Y L+ YC G +A + + M LPD L YN I+G C G
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD-----LCTYNILINGLCNAG 324
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
+ E L ++ M + L PDVV+Y +I G ++G ++A +L +M+ G+ + +
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 274 SLLDDLSDE-----------------------VTYSTLINDFHAQGNLMDAYCLESEMSE 310
L L E VTY TLI + G+L A + EM +
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 311 YSYLTDDVISSVRINGLNKKATTIEA--------KR----------SLVRWFYQDCLSIP 352
+ + + ++ L K+ EA KR +L+ F+++
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 353 AYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIF 412
A +D + + T L+ G A + D++ P+ + +N +I
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 413 DHCRHGNVHKAYDMYKETV 431
+C+ G V KA++ Y E++
Sbjct: 565 GYCKEGRVEKAFEFYNESI 583
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 6/279 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++D+AHN+L RGF TY LI G+ R ++ ++A+ + +M K ++P V T+
Sbjct: 466 KLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFN 525
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G C GK A E ++ G+LPD T+ +IL C++GR+ KAF+ + E ++
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH 585
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
P Y L+N C +G KAL+ + +I + + V YN I C
Sbjct: 586 SFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV------DTVTYNTMISAFCKDK 639
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
+++EA +L M + GL PD +Y + I + G+ + EL + K + D+
Sbjct: 640 KLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQV 699
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYS 312
+ + + L + A +++D C + E+S
Sbjct: 700 ETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHS 738
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 47 VRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLG 106
+ GFSP + TY+ LI Y + A+ ++R+M ++G+ + T ++ C+ KL
Sbjct: 409 MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLD 468
Query: 107 KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLM 166
+A + +G + D TYG LI+ R+ ++ KA +++ EM + ++P + L+
Sbjct: 469 EAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI 528
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA 226
C G+ A++ DE+ G LPD + +N+ I G C GRVE+A
Sbjct: 529 GGLCHHGKTELAMEKFDELAESGLLPDDST-----FNSIILGYCKEGRVEKAFEFYNESI 583
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS-DEVTY 285
PD + ++ G CK G M EK + + + +L+++ D VTY
Sbjct: 584 KHSFKPDNYTCNILLNGLCKEG-----------MTEKAL----NFFNTLIEEREVDTVTY 628
Query: 286 STLINDFHAQGNLMDAYCLESEMSE 310
+T+I+ F L +AY L SEM E
Sbjct: 629 NTMISAFCKDKKLKEAYDLLSEMEE 653
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 125/285 (43%), Gaps = 19/285 (6%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + + + L V + A M++ M +G + T N ++ C+ + EA +
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L KRG D TY LI GF + K+ KA EM +M I P T+ LI LC
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G+ A + F E+ G+ P + ++ YC +G KA + +E I F PD +
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
N ++G C G E+AL + + D V+Y +I FCK + +A++L
Sbjct: 594 -----CNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDL 647
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDA 301
EM+EKG+ D TY++ I+ G L +
Sbjct: 648 LSEMEEKGLE-------------PDRFTYNSFISLLMEDGKLSET 679
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 188/450 (41%), Gaps = 44/450 (9%)
Query: 10 NKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADR 69
+K V P+ + +H L V ++++A + M +G PS TY LI C
Sbjct: 257 SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 70 FKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGI 129
+A + +M RG P+V TY LI G C+ GK+ +A + KMV I P TY
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
LI C+ GR+ AF+L M + P+ + LM C G+ KA+ L M++
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD-- 434
Query: 190 FLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
+G+SP +V YN I G C G + A +L M + PD +++T +I FCK G+
Sbjct: 435 ---NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Query: 250 PVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMS 309
A M KGI L DEVT +TLI+ G DA + +
Sbjct: 492 ADVASAFLGLMLRKGISL-------------DEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 310 EYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLS-IPAYRTYDTLIE------ 362
+ LT +V ++ L+K + K L + L +P+ TY TL++
Sbjct: 539 KMRILTTPHSLNVILDMLSKGC---KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 363 ---------------NCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIY 407
C N + + ++ G +A K M P Y
Sbjct: 596 DITGSFRILELMKLSGCLPNVYPYTI-IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Query: 408 NLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
+++ + +G + +A + + V G E+
Sbjct: 655 TVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 195/450 (43%), Gaps = 51/450 (11%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P R + +L + +DKA N+ MI RG P+V TY LI G CR + +EA G+
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
R M K + P V TY LI G+C+ G++ AFE+ M + P+ T+ L+ LCR
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G+ KA L ML G+SP Y L++ C +G + A L M F I
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM--NCF---DIE 473
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA--- 253
P + + A I+ C G+ + A L M G+S D V+ T +I G CK+G+ A
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533
Query: 254 ---------------FELKLEMDEKGIPLYEDIYQ----SLLDDLSDEVTYSTLINDFHA 294
+ L+M KG + E++ + L + VTY+TL++
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
G++ ++ + M L + ++ INGL + EA++ L QD P +
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM--QDSGVSPNH 651
Query: 355 RTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDH 414
TY +++ NN G +A + M+ Y+ IY+ L+
Sbjct: 652 VTYTVMVKGYVNN---------------GKLDRALETVRAMVERGYELNDRIYSSLL--- 693
Query: 415 CRHGNV--HKAYDMYKETVHSGVEIGRAEP 442
G V K D +E+ S + + +P
Sbjct: 694 --QGFVLSQKGIDNSEESTVSDIALRETDP 721
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 159/316 (50%), Gaps = 19/316 (6%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIV-RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
++ L V Q KA ML+ +I + +S S +YN +I G+ + AV R+M++ G
Sbjct: 561 INGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
SP+V T+ LI GFC++ ++ A EM +M + D YG LI C+K + A+
Sbjct: 621 KSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAY 680
Query: 145 DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
LF E+ G+ P+ +Y L++ + G+ A+DL +M+N DGIS L Y
Sbjct: 681 TLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVN-----DGISCDLFTYTT 735
Query: 205 RIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
I G G + A + + D+G+ PD + + ++ G K G+ +KA ++ EM +K
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK- 794
Query: 265 IPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRI 324
D+ ++L YST+I H +GNL +A+ L EM E + DD + ++ +
Sbjct: 795 -----DVTPNVL-------LYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Query: 325 NGLNKKATTIEAKRSL 340
+G +K SL
Sbjct: 843 SGRVEKPPAASKISSL 858
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 182/401 (45%), Gaps = 45/401 (11%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+VD A + LK M +G P+V YN ++ +CR A I +M ++GL P+ TY
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS 523
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI GF + A+++ +M + Y +I LC+ G+ SKA ++ +++E
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Query: 154 G-VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVL 212
S Y +++ + G+ A++ EM +G SP++V + + I+G C
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSE-----NGKSPNVVTFTSLINGFCKS 638
Query: 213 GRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIY 272
R++ AL + M M L D+ +Y +I GFCK + A+ L E+ E G+ +Y
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVY 698
Query: 273 QSLL---------------------DDLS-DEVTYSTLINDFHAQGNLMDAYCLESEMSE 310
SL+ D +S D TY+T+I+ GN+ A L SE+ +
Sbjct: 699 NSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLD 758
Query: 311 YSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFK 370
+ D+++ V +NGL+KK ++A + L +D P Y T+I
Sbjct: 759 LGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV--TPNVLLYSTVIAG------- 809
Query: 371 TVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLI 411
G ++A + HD+ML + ++NLL+
Sbjct: 810 --------HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 131/253 (51%), Gaps = 6/253 (2%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
S + + V D A + M G SP+V T+ LI+G+C+++R A+ + +M
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM 654
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
L D+ Y LI GFC+ + A+ + +++ G++P+ Y LI G++ A
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
DL+ +M+ +G+S + YT +++ G + A DL E+++ G +PD I ++
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEI-----LHM 769
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
++G G+ +A +L M ++P+V+ Y+ VI G + G +AF L EM EK
Sbjct: 770 VLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829
Query: 264 GIPLYEDIYQSLL 276
GI +++D +LL
Sbjct: 830 GI-VHDDTVFNLL 841
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 210/509 (41%), Gaps = 109/509 (21%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+++A ++ M+ G SV L++GYC+ + +A+ + M + GL+PD +
Sbjct: 325 NMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFS 384
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDA------------------------DTYGI 129
++ FC+ ++ KA E +M I P + D++
Sbjct: 385 VMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFES 444
Query: 130 LI----------LTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKAL 179
I L C++G++ A M ++G+ P+ Y +M +C A
Sbjct: 445 WIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLAR 504
Query: 180 DLPDEMINKGFLPDGISPSL------------------------------VIYNARIHGC 209
+ EM+ KG P+ + S+ VIYN I+G
Sbjct: 505 SIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL 564
Query: 210 CVLGRVEEALGILRGM-ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLY 268
C +G+ +A +L+ + + S SY ++I GF K+G+ A E EM E G
Sbjct: 565 CKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPN 624
Query: 269 EDIYQSLLD--------DLSDEVT--------------YSTLINDFHAQGNLMDAYCLES 306
+ SL++ DL+ E+T Y LI+ F + ++ AY L S
Sbjct: 625 VVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFS 684
Query: 307 EMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIE---- 362
E+ E + + + + I+G + ++A L + D +S + TY T+I+
Sbjct: 685 ELPELGLMPNVSVYNSLISGF-RNLGKMDAAIDLYKKMVNDGISCDLF-TYTTMIDGLLK 742
Query: 363 ----NCSNNEFKTV--VGLVKD----------FSMRGLAHKAAKAHDKMLHGNYKPEGAI 406
N +++ + + +G+V D S +G KA+K ++M + P +
Sbjct: 743 DGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLL 802
Query: 407 YNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
Y+ +I H R GN+++A+ ++ E + G+
Sbjct: 803 YSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 196/509 (38%), Gaps = 100/509 (19%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
K V P N+LS SL+ +D+A + M++ G + T L+ R +
Sbjct: 199 KVVPFVPYVNNVLS---SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKP 255
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK-GILPDADTYGI 129
+EAV I R + RG PD + + C+T L A ++ +M K G+ +TY
Sbjct: 256 EEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTS 315
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
+I+ ++G + +A + EM+ G+ T L+N YC E KALDL + M +G
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG 375
Query: 190 FLPDG------------------------------ISPSLVIYNARIHGC---------- 209
PD I+PS V+ + I GC
Sbjct: 376 LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435
Query: 210 ------------------------CVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFC 245
C G+V+ A L+ M G+ P+VV Y N++ C
Sbjct: 436 EIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHC 495
Query: 246 KIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLE 305
++ A + EM EKG+ + TYS LI+ F + +A+ +
Sbjct: 496 RMKNMDLARSIFSEMLEKGLE-------------PNNFTYSILIDGFFKNKDEQNAWDVI 542
Query: 306 SEMSEYSYLTDDVISSVRINGLNKKATTIEAKR-------------------SLVRWFYQ 346
++M+ ++ ++VI + INGL K T +AK S++ F +
Sbjct: 543 NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVK 602
Query: 347 DCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAI 406
+ A TY + EN + T L+ F A + +M K +
Sbjct: 603 VGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA 662
Query: 407 YNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
Y LI C+ ++ AY ++ E G+
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGL 691
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P+ S ++ ++D A M M + Y LI G+C+ + K A +
Sbjct: 623 PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
++ + GL P+V Y LI GF GK+ A ++ KMV+ GI D TY +I L +
Sbjct: 683 FSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLK 742
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G ++ A DL+ E+L G+ P + ++ L+N KG+F KA + +EM K ++
Sbjct: 743 DGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK-----DVT 797
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
P++++Y+ I G G + EA + M + G+ D + ++ G ++ +P A
Sbjct: 798 PNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG--RVEKPPAA 852
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 157/395 (39%), Gaps = 49/395 (12%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GF + +N L++ Y R R AV M R + P V ++ ++ + +A
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
E+ KMV G+ D T +L+ R+ + +A +F ++ G P +++ +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
C + ALDL EM +G L G+ S Y + I G +EEA+ ++ M
Sbjct: 284 ACKTPDLVMALDLLREM--RGKL--GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
G+ V++ T+++ G+CK E KA +L M+E+G+ D+V +S +
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLA-------------PDKVMFSVM 386
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDC 348
+ + +C EM + + K+ I LV Q C
Sbjct: 387 V----------EWFCKNMEMEKAIEFY-----------MRMKSVRIAPSSVLVHTMIQGC 425
Query: 349 LSIPAYRTYDTLIENCSNNEFKTVVG-------LVKDFSMRGLAHKAAKAHDKMLHGNYK 401
L + + N+ F++ + + F +G A M +
Sbjct: 426 LKAESPEAALEIF----NDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIE 481
Query: 402 PEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
P YN ++ HCR N+ A ++ E + G+E
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLE 516
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 186/427 (43%), Gaps = 53/427 (12%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A + L M+ GF P + T+ LI+G+C +R +EA+ ++ M + G+ PDV Y +I
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
C+ G + A + +M + GI PD Y L+ LC GR A L M + + P
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+ L++ + +G+F A +L +EMI I+P++ Y + I+G C+ G V+E
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRM-----SIAPNIFTYTSLINGFCMEGCVDE 300
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
A + M G PDVV+YT++I GFCK + A ++ EM +KG+
Sbjct: 301 ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT----------- 349
Query: 278 DLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRI-----NGLNKKAT 332
+ +TY+TLI F G A + S M + +V + NG KKA
Sbjct: 350 --GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 333 TI---EAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMR------ 382
I KR + D ++ P TY+ L+ C N + + + + +D R
Sbjct: 408 MIFEDMQKREM------DGVA-PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460
Query: 383 -------------GLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKE 429
G A + KP Y +I R G H+A+ ++++
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Query: 430 TVHSGVE 436
GV
Sbjct: 521 MKEDGVS 527
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 182/406 (44%), Gaps = 38/406 (9%)
Query: 29 LLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
LLNV + D N+ ++ + G S + T N L++ +C++ + A L M K G
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
PD+ T+ LI GFC ++ +A M +MV GI PD Y +I +LC+ G ++ A
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 145 DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
LF +M G+ P +YT L+N C G + A D ++ +G I P ++ +NA
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA----DSLL-RGMTKRKIKPDVITFNA 252
Query: 205 RIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
I G+ +A + M M ++P++ +YT++I GFC G +A ++ M+ KG
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 265 IPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRI 324
D V Y++LIN F + DA + EMS+ + + + I
Sbjct: 313 C-------------FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 325 NGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRG 383
G + A+ + P RTY+ L+ C N + K + + +D R
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGV--PPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 384 LAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKE 429
+ A P YN+L+ C +G + KA ++++
Sbjct: 418 MDGVA-------------PNIWTYNVLLHGLCYNGKLEKALMVFED 450
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 132/262 (50%), Gaps = 5/262 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+PD S ++ ++++A +M+ M+ G P V Y +I C+ A+
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ M G+ PDV Y L+ G C +G+ A + M + I PD T+ LI
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
++G+ A +L+ EM+R ++P+ + YT L+N +C +G +A + M KG PD
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD- 316
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+V Y + I+G C +V++A+ I M+ GL+ + ++YT +I+GF ++G+P A
Sbjct: 317 ----VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 255 ELKLEMDEKGIPLYEDIYQSLL 276
E+ M +G+P Y LL
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLL 394
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 158/403 (39%), Gaps = 44/403 (10%)
Query: 47 VRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLG 106
VR F Y E++ + +F EA+ + M + P + + L+ + K
Sbjct: 34 VRAF----CNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFD 89
Query: 107 KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLM 166
+ + G+ D T +L+ C+ + A +M++ G P +T L+
Sbjct: 90 VVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLI 149
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA 226
N +C +A+ + ++M+ GI P +V+Y I C G V AL + M
Sbjct: 150 NGFCLGNRMEEAMSMVNQMVEM-----GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQME 204
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYS 286
+ G+ PDVV YT+++ G C G A L M ++ I D +T++
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK-------------PDVITFN 251
Query: 287 TLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQ 346
LI+ F +G +DA L +EM S + + ING + EA++ +
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 347 DCLSIPAYRTYDTLIEN-CSNNEFK-------------------TVVGLVKDFSMRGLAH 386
C P Y +LI C + T L++ F G +
Sbjct: 312 GCF--PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 387 KAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKE 429
A + M+ P YN+L+ C +G V KA ++++
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVR---GFSPSVATYNELIHGYCRADRFKEA 73
P+ R +H L +V KA + + M R G +P++ TYN L+HG C + ++A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 74 VGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
+ + DM KR + + TY +I G C+ GK+ A + + KG+ P+ TY +I
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Query: 134 LCRKGRLSKAFDLFLEMLREGVS 156
L R+G +A LF +M +GVS
Sbjct: 505 LFREGLKHEAHVLFRKMKEDGVS 527
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 182/423 (43%), Gaps = 44/423 (10%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + VH L + +A +++ M+V+G P + TY +I+G C+ A+ +
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L M K + DV Y +I G C+ + AF++ KM KGI PD TY LI LC
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMI-NKGFLPDGI 195
GR S A L +ML + ++P + L++ + +G+ +A L DEM+ +K PD
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD-- 355
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
+V YN I G C RVEE + + R M+ GL + V+YT +I GF + + A
Sbjct: 356 ---VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLT 315
+ +M G+ + DI +TY+ L++ GN+ A + M +
Sbjct: 413 VFKQMVSDGV--HPDI-----------MTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 316 DDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSI----PAYRTYDTLIENCSNNEFKT 371
D V + I L K + W LS+ P TY T++
Sbjct: 460 DIVTYTTMIEALCKAGKVEDG------WDLFCSLSLKGVKPNVVTYTTMMSG-------- 505
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETV 431
F +GL +A +M P YN LI R G+ + ++ KE
Sbjct: 506 -------FCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Query: 432 HSG 434
G
Sbjct: 559 SCG 561
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 187/431 (43%), Gaps = 41/431 (9%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D R LS+ +L ++D A + M+ PS+ +++L+ + ++F + +
Sbjct: 41 DCRENLSR--KVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLG 98
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
M G+S ++ TY I FC+ +L A + KM+ G P T L+ C
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
R+S+A L +M+ G P +T L++ + S+A+ L + M+ KG PD
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD---- 214
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELK 257
LV Y A I+G C G + AL +L M + DVV Y +I G CK AF+L
Sbjct: 215 -LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 258 LEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDD 317
+M+ KGI D TY+ LI+ G DA L S+M E + D
Sbjct: 274 NKMETKGIK-------------PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 318 VISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLV 376
V + I+ K+ +EA++ L + P Y+TLI+ C + + +
Sbjct: 321 VFFNALIDAFVKEGKLVEAEK-LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 377 KDFSMRGLA----------HKAAKAHD---------KMLHGNYKPEGAIYNLLIFDHCRH 417
++ S RGL H +A D +M+ P+ YN+L+ C +
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 418 GNVHKAYDMYK 428
GNV A +++
Sbjct: 440 GNVETALVVFE 450
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H D A + K M+ G P + TYN L+ G C + A+ + M KR +
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
D+ TY +I C+ GK+ +++ + KG+ P+ TY ++ CRKG +A
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
LF+EM +G P+ Y L+ G+ + + +L EM + GF D + LV
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
+ + +L +V+ ++ + ++G P+V TY ++ G+CR +EA + +M +
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
G P+ TY LI + G + E+ +M G DA T+G L+ + GRL K+
Sbjct: 526 GPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKS 584
Query: 144 FDLFLEML 151
FL+ML
Sbjct: 585 ---FLDML 589
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 176/390 (45%), Gaps = 40/390 (10%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
M+ GF PS+ T L++G+C+ +RF+EAV ++ M G P+V Y +I G C+
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
L A E+ M KGI DA TY LI L GR + A L +M++ + P+ +T
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
L++ + +G +A +L EMI + + P++ YN+ I+G C+ G + +A +
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRR-----SVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT 284
M G PDVV+Y +I GFCK +L EM +G+ + D T
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL-------------VGDAFT 361
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWF 344
Y+TLI+ + G L A + + M + D V ++ ++ L IE +V
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG-KIEKALVMVEDL 420
Query: 345 YQDCLSIPAYRTYDTLIEN-CSNNEFKTV-------------------VGLVKDFSMRGL 384
+ + + TY+ +I+ C ++ K + ++ +GL
Sbjct: 421 QKSEMDVDII-TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 385 AHKAAKAHDKMLHGNYKPEGAIYNLLIFDH 414
+A K +M + P IY+ + DH
Sbjct: 480 QREADKLCRRMKEDGFMPSERIYDETLRDH 509
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 134/264 (50%), Gaps = 5/264 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DP+ + + + + + +A N+ K MI R P+V TYN LI+G+C +A
Sbjct: 250 IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 309
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ M +G PDV TY LI GFC++ ++ ++ +M ++G++ DA TY LI
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGY 369
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C+ G+L+ A +F M+ GVSP Y L++ C G+ KAL + +++ D
Sbjct: 370 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD- 428
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
++ YN I G C +++EA + R + G+ PD ++Y +I G C+ G +A
Sbjct: 429 ----IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDD 278
+L M E G E IY L D
Sbjct: 485 KLCRRMKEDGFMPSERIYDETLRD 508
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 171/408 (41%), Gaps = 35/408 (8%)
Query: 30 LNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDV 89
L+ + D A ++ M+ PS+ + ++ + ++F + + M G+S D+
Sbjct: 55 LHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL 114
Query: 90 DTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLE 149
++ LI FC+ +L A + KM+ G P T G L+ C+ R +A L
Sbjct: 115 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 174
Query: 150 MLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGC 209
M G P+ IY ++N C + + AL++ M KG D ++ YN I G
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT-----YNTLISGL 229
Query: 210 CVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYE 269
GR +A +LR M + P+V+ +T +I F K G ++A L EM + +
Sbjct: 230 SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV---- 285
Query: 270 DIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNK 329
+ + TY++LIN F G L DA + M D V + I G K
Sbjct: 286 ---------VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Query: 330 KATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAA 389
+ + YQ + A+ TY+TLI + G + A
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVG-DAF-TYNTLIHG---------------YCQAGKLNVAQ 379
Query: 390 KAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
K ++M+ P+ YN+L+ C +G + KA M ++ S +++
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 188/424 (44%), Gaps = 61/424 (14%)
Query: 49 GFSPSVATYNELIHGYCRADR---------------FKEAVGILRDMAKRGLSPDVDTYY 93
GF P V T+N L+HG C DR F EAV + M + GL+P V T+
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G C G++ +A + KMV KG+ D TYG ++ +C+ G A +L +M
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
+ P IY+ +++ C G S A L EM+ KG I+P++ YN I G C G
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-----IAPNVFTYNCMIDGFCSFG 345
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
R +A +LR M + ++PDV+++ +I K G+ +A +L EM + I
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI-------- 397
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
D VTY+++I F DA + M+ + DV++ I + +A
Sbjct: 398 -----FPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA-----SPDVVTFNTIIDVYCRAKR 447
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAH 392
++ L+R + L + TY+TLI C + L ++ G+
Sbjct: 448 VDEGMQLLREISRRGL-VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC- 505
Query: 393 DKMLHG---NYKPEGAI-----------------YNLLIFDHCRHGNVHKAYDMYKETVH 432
+ +L+G N K E A+ YN++I C+ V +A+D++
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 433 SGVE 436
GVE
Sbjct: 566 HGVE 569
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 189/446 (42%), Gaps = 65/446 (14%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
+A + M+ G +P V T+N LI+G C R EA ++ M +GL DV TY ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
G C+ G A + +KM I PD Y +I LC+ G S A LF EML +G++
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS-------------------- 196
P+ + Y +++ +C G +S A L +MI + PD ++
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 197 ----------PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCK 246
P V YN+ I+G C R ++A + M D+ SPDVV++ +I +C+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCR 444
Query: 247 IGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLES 306
+ +L E+ +G+ +++ TY+TLI+ F NL A L
Sbjct: 445 AKRVDEGMQLLREISRRGL-------------VANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 307 EMSEYSYLTDDVISSVRINGLNKKATTIEAKR--SLVRWFYQDCLSIP------------ 352
EM + D + ++ + G + EA +++ D ++
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 353 ----AYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYN 408
A+ + +L + + +T ++ F + A KM ++P+ + YN
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 409 LLIFDHCRHGNVHKAYDMYKETVHSG 434
LI + G + K+ ++ E +G
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 177/425 (41%), Gaps = 60/425 (14%)
Query: 4 TASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMI-VRGFSPSVATYNELIH 62
T S + V + +E L S H +D A + YM+ R F +V N++I
Sbjct: 59 TKSLPSLTQVTFEGEELKLKSGSHYF---KSLDDAIDFFDYMVRSRPFYTAVDC-NKVIG 114
Query: 63 GYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILP 122
+ R +R A+ + R M R + ++ ++ LI FC KL + K+ G P
Sbjct: 115 VFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQP 174
Query: 123 DADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLP 182
D T+ L+ LC + R+S+A LF M+ G F +A+ L
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVETG--------------------FLEAVALF 214
Query: 183 DEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIK 242
D+M+ G++P ++ +N I+G C+ GRV EA ++ M GL DVV+Y ++
Sbjct: 215 DQMVEI-----GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 243 GFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAY 302
G CK+G+ A L +M+E I D V YS +I+ G+ DA
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIK-------------PDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 303 CLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIE 362
L SEM E + + I+G S RW A R +IE
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFC----------SFGRWS-------DAQRLLRDMIE 359
Query: 363 NCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHK 422
N + T L+ G +A K D+MLH P+ YN +I+ C+H
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 423 AYDMY 427
A M+
Sbjct: 420 AKHMF 424
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 116/249 (46%), Gaps = 11/249 (4%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD S ++ + D A +M M SP V T+N +I YCRA R E + +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
LR++++RGL + TY LI GFC+ L A ++ +M+ G+ PD T IL+ C
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLP-DGI 195
+L +A +LF + + Y +++ C + +A DL LP G+
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS------LPIHGV 568
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
P + YN I G C + +A + M D G PD +Y +I+G K GE K+ E
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 256 LKLEMDEKG 264
L EM G
Sbjct: 629 LISEMRSNG 637
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 157/365 (43%), Gaps = 88/365 (24%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A + M+ +G +P+V TYN +I G+C R+ +A +LRDM +R ++PDV T+ LI
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA---FDLF------- 147
+ GKL +A ++ +M+H+ I PD TY +I C+ R A FDL
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT 434
Query: 148 -----------------LEMLRE----GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMI 186
+++LRE G+ + Y L++ +C + A DL EMI
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 187 NKGFLPDGISPSL------------------------------VIYNARIHGCCVLGRVE 216
+ G PD I+ ++ V YN IHG C +V+
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
EA + + G+ PDV +Y +I GFC A L +M + G +E
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG---HE------- 604
Query: 277 DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEA 336
D TY+TLI CL++ + S ++IS +R NG + A TI+
Sbjct: 605 ---PDNSTYNTLIRG-----------CLKAGEIDKSI---ELISEMRSNGFSGDAFTIKM 647
Query: 337 KRSLV 341
L+
Sbjct: 648 VADLI 652
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 21/247 (8%)
Query: 2 MITASCKNNK--------AVILDPDERNLLSQVHSLLNVY----QVDKAHNMLKYMIVRG 49
MI CK+N+ ++ PD + +++++VY +VD+ +L+ + RG
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
+ TYN LIHG+C D A + ++M G+ PD T L+ GFC+ KL +A
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
E+ + I D Y I+I +C+ ++ +A+DLF + GV P Y +++ +
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
C K S A L +M + G PD + YN I GC G +++++ ++ M G
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNST-----YNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 230 LSPDVVS 236
S D +
Sbjct: 638 FSGDAFT 644
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 188/424 (44%), Gaps = 61/424 (14%)
Query: 49 GFSPSVATYNELIHGYCRADR---------------FKEAVGILRDMAKRGLSPDVDTYY 93
GF P V T+N L+HG C DR F EAV + M + GL+P V T+
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G C G++ +A + KMV KG+ D TYG ++ +C+ G A +L +M
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
+ P IY+ +++ C G S A L EM+ KG I+P++ YN I G C G
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-----IAPNVFTYNCMIDGFCSFG 345
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
R +A +LR M + ++PDV+++ +I K G+ +A +L EM + I
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI-------- 397
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
D VTY+++I F DA + M+ + DV++ I + +A
Sbjct: 398 -----FPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA-----SPDVVTFNTIIDVYCRAKR 447
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAH 392
++ L+R + L + TY+TLI C + L ++ G+
Sbjct: 448 VDEGMQLLREISRRGL-VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC- 505
Query: 393 DKMLHG---NYKPEGAI-----------------YNLLIFDHCRHGNVHKAYDMYKETVH 432
+ +L+G N K E A+ YN++I C+ V +A+D++
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 433 SGVE 436
GVE
Sbjct: 566 HGVE 569
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 199/483 (41%), Gaps = 80/483 (16%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGF---------------SPSVATYNE 59
PD + +H L ++ +A + YM+ GF +P V T+N
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 60 LIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG 119
LI+G C R EA ++ M +GL DV TY ++ G C+ G A + +KM
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 120 ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKAL 179
I PD Y +I LC+ G S A LF EML +G++P+ + Y +++ +C G +S A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 180 DLPDEMINKGFLPDGIS------------------------------PSLVIYNARIHGC 209
L +MI + PD ++ P V YN+ I+G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 210 CVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYE 269
C R ++A + M D+ SPDVV++ +I +C+ + +L E+ +G+
Sbjct: 412 CKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL---- 463
Query: 270 DIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNK 329
+++ TY+TLI+ F NL A L EM + D + ++ + G +
Sbjct: 464 ---------VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 330 KATTIEAKR--SLVRWFYQDCLSIP----------------AYRTYDTLIENCSNNEFKT 371
EA +++ D ++ A+ + +L + + +T
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETV 431
++ F + A KM ++P+ + YN LI + G + K+ ++ E
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Query: 432 HSG 434
+G
Sbjct: 635 SNG 637
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 177/425 (41%), Gaps = 60/425 (14%)
Query: 4 TASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMI-VRGFSPSVATYNELIH 62
T S + V + +E L S H +D A + YM+ R F +V N++I
Sbjct: 59 TKSLPSLTQVTFEGEELKLKSGSHYF---KSLDDAIDFFDYMVRSRPFYTAVDC-NKVIG 114
Query: 63 GYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILP 122
+ R +R A+ + R M R + ++ ++ LI FC KL + K+ G P
Sbjct: 115 VFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQP 174
Query: 123 DADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLP 182
D T+ L+ LC + R+S+A LF M+ G F +A+ L
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVETG--------------------FLEAVALF 214
Query: 183 DEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIK 242
D+M+ G++P ++ +N I+G C+ GRV EA ++ M GL DVV+Y ++
Sbjct: 215 DQMVEI-----GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 243 GFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAY 302
G CK+G+ A L +M+E I D V YS +I+ G+ DA
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIK-------------PDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 303 CLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIE 362
L SEM E + + I+G S RW A R +IE
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFC----------SFGRW-------SDAQRLLRDMIE 359
Query: 363 NCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHK 422
N + T L+ G +A K D+MLH P+ YN +I+ C+H
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 423 AYDMY 427
A M+
Sbjct: 420 AKHMF 424
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 155/365 (42%), Gaps = 88/365 (24%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A + M+ +G +P+V TYN +I G+C R+ +A +LRDM +R ++PDV T+ LI
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA---FDLF------- 147
+ GKL +A ++ +M+H+ I PD TY +I C+ R A FDL
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT 434
Query: 148 -----------------LEMLRE----GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMI 186
+++LRE G+ + Y L++ +C + A DL EMI
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 187 NKGFLPDGISPSL------------------------------VIYNARIHGCCVLGRVE 216
+ G PD I+ ++ V YN IHG C +V+
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
EA + + G+ PDV +Y +I GFC A L +M + G
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE---------- 604
Query: 277 DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEA 336
D TY+TLI CL++ + S ++IS +R NG + A TI+
Sbjct: 605 ---PDNSTYNTLIRG-----------CLKAGEIDKSI---ELISEMRSNGFSGDAFTIKM 647
Query: 337 KRSLV 341
++
Sbjct: 648 AEEII 652
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 21/260 (8%)
Query: 2 MITASCKNNK--------AVILDPDERNLLSQVHSLLNVY----QVDKAHNMLKYMIVRG 49
MI CK+N+ ++ PD + +++++VY +VD+ +L+ + RG
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
+ TYN LIHG+C D A + ++M G+ PD T L+ GFC+ KL +A
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
E+ + I D Y I+I +C+ ++ +A+DLF + GV P Y +++ +
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
C K S A L +M + G PD + YN I GC G +++++ ++ M G
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNST-----YNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 230 LSPDVVSYTNVIKGFCKIGE 249
S D + + C++ +
Sbjct: 638 FSGDAFTIKMAEEIICRVSD 657
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 179/385 (46%), Gaps = 60/385 (15%)
Query: 21 NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM 80
N L Q SL +++ A ++ M +GF P + TYN ++ C R E +LR+M
Sbjct: 264 NTLVQGFSLRG--RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREM 318
Query: 81 AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILP------------------ 122
+ GL PD +Y LI G G L AF + +MV +G++P
Sbjct: 319 KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 378
Query: 123 -----------------DADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRL 165
D+ TY ILI C+ G KAF L EM+ +G+ P ++ YT L
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438
Query: 166 MNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM 225
+ C K + +A +L ++++ KG PD LV+ N + G C +G ++ A +L+ M
Sbjct: 439 IYVLCRKNKTREADELFEKVVGKGMKPD-----LVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 226 ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTY 285
M ++PD V+Y +++G C G+ +A EL EM +GI D ++Y
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIK-------------PDHISY 540
Query: 286 STLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFY 345
+TLI+ + +G+ A+ + EM + + + + GL+K E L+R
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEG-ELAEELLREMK 599
Query: 346 QDCLSIPAYRTYDTLIENCSNNEFK 370
+ + +P ++ ++IE SN + K
Sbjct: 600 SEGI-VPNDSSFCSVIEAMSNLDAK 623
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 180/402 (44%), Gaps = 38/402 (9%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++ KA L M V G P++ TYN L+ G+ R + A I+ +M +G PD+ TY
Sbjct: 240 KLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYN 299
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
P++ C G+ A E+ +M G++PD+ +Y ILI G L AF EM+++
Sbjct: 300 PILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQ 356
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ P Y Y L++ + + A L E+ KG + D ++ YN I+G C G
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVT-----YNILINGYCQHG 411
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
++A + M G+ P +YT++I C+ + +A EL ++ KG+
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMK------- 464
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
D V +TL++ A GN+ A+ L EM S DDV + + GL +
Sbjct: 465 ------PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHD 393
EA R L+ + + P + +Y+TLI +S +G A D
Sbjct: 519 EEA-RELMGEMKRRGIK-PDHISYNTLISG---------------YSKKGDTKHAFMVRD 561
Query: 394 KMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+ML + P YN L+ ++ A ++ +E G+
Sbjct: 562 EMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGI 603
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 179/408 (43%), Gaps = 48/408 (11%)
Query: 24 SQVHSLLNVY-QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
S+ +S+ N++ ++ AH+ L+ + S ++ L+ C+ EA+ M +
Sbjct: 131 SRKNSIRNLFDELVLAHDRLE-------TKSTILFDLLVRCCCQLRMVDEAIECFYLMKE 183
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
+G P +T ++ + ++ A+ A M I + T+ I+I LC++G+L K
Sbjct: 184 KGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKK 243
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIY 202
A M G+ P Y L+ + +G A + EM +KGF PD + Y
Sbjct: 244 AKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPD-----MQTY 298
Query: 203 NARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
N + C GR E +LR M ++GL PD VSY +I+G G+ AF + EM +
Sbjct: 299 NPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVK 355
Query: 263 KG-IPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISS 321
+G +P + TY+TLI+ + + A L E+ E + D V +
Sbjct: 356 QGMVPTF--------------YTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYN 401
Query: 322 VRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSM 381
+ ING + +AK+ A+ +D ++ + T L+
Sbjct: 402 ILINGYCQHG---DAKK--------------AFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 382 RGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKE 429
+ +A + +K++ KP+ + N L+ HC GN+ +A+ + KE
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 46/341 (13%)
Query: 100 CQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHK 159
CQ + +A E M KG P +T ++ L R R+ A+ + +M R + +
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNV 225
Query: 160 YIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD----GISPSLVIYNARIHGCCVLGRV 215
Y + ++N C +G+ KA KGFL GI P++V YN + G + GR+
Sbjct: 226 YTFNIMINVLCKEGKLKKA---------KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 216 EEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSL 275
E A I+ M G PD+ +Y ++ C G +A E+ EM E G+
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGL---------- 323
Query: 276 LDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIE 335
+ D V+Y+ LI G+L A+ EM + + + I+GL + IE
Sbjct: 324 ---VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME-NKIE 379
Query: 336 AKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKM 395
A L+R + + + + TY+ LI + G A KA HD+M
Sbjct: 380 AAEILIREIREKGIVLDSV-TYNILING---------------YCQHGDAKKAFALHDEM 423
Query: 396 LHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
+ +P Y LI+ CR +A +++++ V G++
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMK 464
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ P + S ++ L + +A + + ++ +G P + N L+ G+C A
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAF 487
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L++M ++PD TY L+ G C GK +A E+ +M +GI PD +Y LI
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+KG AF + EML G +P Y L+ E A +L EM ++G +P+
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPND 607
Query: 195 ISPSLVI 201
S VI
Sbjct: 608 SSFCSVI 614
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 187/439 (42%), Gaps = 75/439 (17%)
Query: 44 YMIVR-----GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICG 98
YM+ R GF P+V TYN L+ C+ ++ A +L +M+ +G PD +Y +I
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 99 FCQTG--KLGK----------------------------AFEMKAKMVHKGILPDADTYG 128
C+ G K G+ AFE+ +MV KGI P+ +Y
Sbjct: 226 MCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 129 ILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINK 188
LI LC G++ AF +ML+ G P+ Y + L+ +G ALDL ++MI +
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-R 344
Query: 189 GFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
GF G+ P++V YN + G C G + +A+ + M ++G SP++ +Y ++I GF K G
Sbjct: 345 GF---GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 249 EPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
A + +M G + V Y+ ++ +A L M
Sbjct: 402 SLDGAVYIWNKMLTSGC-------------CPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 309 SEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSN-N 367
S+ + + I GL A ++ + R Q P TY+ L++ + N
Sbjct: 449 SKENCAPSVPTFNAFIKGLC-DAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKAN 507
Query: 368 EFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGN--------------------YKPEGAIY 407
+ GL ++ MRG+ ++ ++ +LHG+ P+
Sbjct: 508 RIEEAYGLTREIFMRGV-EWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566
Query: 408 NLLIFDHCRHGNVHKAYDM 426
N++I +C+ G +A M
Sbjct: 567 NMIILAYCKQGKAERAAQM 585
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 173/419 (41%), Gaps = 43/419 (10%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
QVD +L+ M ++GF S + +I Y + + AV + + + G P V Y
Sbjct: 91 QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYN 150
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
++ ++ + + M G P+ TY +L+ LC+ ++ A L +EM +
Sbjct: 151 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 210
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G P YT +++ C G + +L + P + +YNA I+G C
Sbjct: 211 GCCPDAVSYTTVISSMCEVGLVKEGRELAERF----------EPVVSVYNALINGLCKEH 260
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
+ A ++R M + G+SP+V+SY+ +I C G+ AF +M ++G + +IY
Sbjct: 261 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC--HPNIY- 317
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
T S+L+ +G DA L ++M L +V+
Sbjct: 318 ----------TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVV-------------- 353
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIE-NCSNNEFKTVVGLVKDFSMRGLAHKAAKAH 392
A +LV+ F + A + + E CS N +T L+ F+ RG A
Sbjct: 354 --AYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPN-IRTYGSLINGFAKRGSLDGAVYIW 410
Query: 393 DKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPSFTWPRPGL 451
+KML P +Y ++ CRH +A + + + S + P+F GL
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE--IMSKENCAPSVPTFNAFIKGL 467
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 121/280 (43%), Gaps = 21/280 (7%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
P+ R S ++ +D A + M+ G P+V Y ++ CR +FKEA
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES 443
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK-GILPDADTYGILILTL 134
++ M+K +P V T+ I G C G+L A ++ +M + P+ TY L+ L
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ R+ +A+ L E+ GV Y L++ C G AL L +M + DG
Sbjct: 504 AKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM-----MVDG 558
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILR--GMADMGLSPDVVSYTNVIKGFCKIGEPVK 252
SP + N I C G+ E A +L PDV+SYTNVI G C+
Sbjct: 559 KSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSN---- 614
Query: 253 AFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDF 292
E G+ L E + + + + T+S LIN F
Sbjct: 615 -------CREDGVILLERMISAGI--VPSIATWSVLINCF 645
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 160/325 (49%), Gaps = 15/325 (4%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P+E + +H L ++DKA ++L+ M+ P+ TY LI+G + R +AV +
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L M +RG + Y LI G + GK +A + KM KG P+ Y +L+ LCR
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
+G+ ++A ++ M+ G P+ Y Y+ LM + G +A+ + EM G S
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKT-----GCS 464
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
+ Y+ I G C +GRV+EA+ + M +G+ PD V+Y+++IKG C IG A +L
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
EM + Q D VTY+ L++ Q ++ A L + M + D
Sbjct: 525 YHEM----------LCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPD 574
Query: 317 DVISSVRINGLNKKATTIEAKRSLV 341
+ + +N L++K+ + + RS +
Sbjct: 575 VITCNTFLNTLSEKSNSCDKGRSFL 599
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 181/415 (43%), Gaps = 40/415 (9%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ +L + VD+A + + M R P TY L+ G C+ +R EAV +L +M G
Sbjct: 194 IKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
SP Y LI G C+ G L + ++ M KG +P+ TY LI LC KG+L KA
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
L M+ P+ Y L+N + + A+ L M +G+ + IY+
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY-----HLNQHIYSVL 368
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
I G G+ EEA+ + R MA+ G P++V Y+ ++ G C+ G+P +A E+ M G
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 266 PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRIN 325
L + TYS+L+ F G +A + EM + + SV I+
Sbjct: 429 -------------LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLID 475
Query: 326 GLNKKATTIEAKRSLVRWFYQDCLSI-PAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGL 384
GL K +++ W + I P Y ++I K + G+ G
Sbjct: 476 GL---CGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII--------KGLCGI-------GS 517
Query: 385 AHKAAKAHDKML---HGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
A K + +ML +P+ YN+L+ C ++ +A D+ + G +
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCD 572
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 186/440 (42%), Gaps = 38/440 (8%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + + L ++D+A +L M G SPS YN LI G C+ +
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
+ +M +G P+ TY LI G C GKL KA + +MV +P+ TYG LI L +
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
+ R + A L M G +++IY+ L++ +G+ +A+ L +M K G
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK-----GCK 394
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P++V+Y+ + G C G+ EA IL M G P+ +Y++++KGF K G +A ++
Sbjct: 395 PNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQV 454
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLS----------------------DEVTYSTLINDFHA 294
EMD+ G + Y L+D L D V YS++I
Sbjct: 455 WKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCG 514
Query: 295 QGNLMDAYCLESEM---SEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSI 351
G++ A L EM E D V ++ ++GL + A L + C
Sbjct: 515 IGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGC--D 572
Query: 352 PAYRTYDTLIENCSNNEFKTVVG------LVKDFSMRGLAHKAAKAHDKMLHGNYKPEGA 405
P T +T + S G LV R A + ML P+ +
Sbjct: 573 PDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTS 632
Query: 406 IYNLLIFDHCRHGNVHKAYD 425
+ +++ + C+ ++ A D
Sbjct: 633 TWAMIVREICKPKKINAAID 652
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 98/250 (39%), Gaps = 44/250 (17%)
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK--------------GIPLYEDIY 272
+M +SP+ +S+ VIK CK+ +A E+ M E+ G+ E I
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 273 QS--LLDDLSDE------VTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRI 324
++ LLD++ E V Y+ LI+ +G+L L M + ++V + I
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 325 NGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKT-VVGLVKDFSMRG 383
+GL K +A L R C IP TY TLI T V L+ RG
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKC--IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 384 L-------------------AHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAY 424
A +A KM KP +Y++L+ CR G ++A
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 425 DMYKETVHSG 434
++ + SG
Sbjct: 418 EILNRMIASG 427
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 208/452 (46%), Gaps = 42/452 (9%)
Query: 2 MITASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELI 61
++ S + + I PD + S + + +D+ + M+ + SP+V TY+ I
Sbjct: 112 LVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWI 170
Query: 62 HGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGIL 121
+C++ + A+ M + LSP+V T+ LI G+C+ G L A + +M +
Sbjct: 171 DTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS 230
Query: 122 PDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDL 181
+ TY LI C+KG + +A +++ M+ + V P+ +YT +++ + +G+ A+
Sbjct: 231 LNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKF 290
Query: 182 PDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI 241
+M+N+G D + Y I G C G+++EA I+ M L PD+V +T ++
Sbjct: 291 LAKMLNQGMRLD-----ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 242 KGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL-----------------SDEVT 284
+ K G A + ++ E+G +++D + +++V
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM 405
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWF 344
Y+ LI+ +G+ ++ L S++SE + D + + I GL K+ ++A + R
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 345 YQD-CLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPE 403
+ L + AY T L+ + +GL +A + D+ML+ P+
Sbjct: 466 QEGLLLDLLAYTT------------------LIYGLASKGLMVEARQVFDEMLNSGISPD 507
Query: 404 GAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
A+++LLI + + GN+ A D+ + G+
Sbjct: 508 SAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 42/233 (18%)
Query: 1 MMITASCKNNK-----AVILDPDERNLLSQV---HSLLNVY----QVDKAHNMLKYMIVR 48
++I+ C N K ++ D ++ +L+ + +++N Y ++ A NM +I R
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367
Query: 49 GFSPSVAT------------------------------YNELIHGYCRADRFKEAVGILR 78
GF P V Y LI C+ F E +
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFS 427
Query: 79 DMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKG 138
+++ GL PD Y I G C+ G L AF++K +MV +G+L D Y LI L KG
Sbjct: 428 KISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKG 487
Query: 139 RLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL 191
+ +A +F EML G+SP ++ L+ Y +G + A DL +M +G +
Sbjct: 488 LMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 195/446 (43%), Gaps = 81/446 (18%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q+ A +L M G P++ N I + RA+R ++A+ L M G+ P+V TY
Sbjct: 257 QLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYN 316
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
+I G+C ++ +A E+ M KG LPD +Y ++ LC++ R+ + DL +M +E
Sbjct: 317 CMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE 376
Query: 154 -GVSPHKYIYTRLMNY-----------------------------------YCFKGEFSK 177
G+ P + Y L++ C +G S+
Sbjct: 377 HGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSE 436
Query: 178 ALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSY 237
A DL +EM++KG P P +V Y A ++G C LG V++A +L+ M G P+ VSY
Sbjct: 437 AKDLINEMLSKGHCP----PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSY 492
Query: 238 TNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGN 297
T ++ G C+ G+ ++A E+ + + E+ + S + +TYS +++ +G
Sbjct: 493 TALLNGMCRTGKSLEAREM--------MNMSEEHWWS-----PNSITYSVIMHGLRREGK 539
Query: 298 LMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPA---Y 354
L +A + EM + V ++ + L + T EA++ F ++CL+
Sbjct: 540 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK-----FMEECLNKGCAINV 594
Query: 355 RTYDTLIEN-CSNNEFK-------------------TVVGLVKDFSMRGLAHKAAKAHDK 394
+ T+I C N+E T LV +G +A + K
Sbjct: 595 VNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKK 654
Query: 395 MLHGNYKPEGAIYNLLIFDHCRHGNV 420
MLH P Y +I +C+ G V
Sbjct: 655 MLHKGIDPTPVTYRTVIHRYCQMGKV 680
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 187/412 (45%), Gaps = 47/412 (11%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD+ + +H L D+A LK +GF Y+ ++H C+ R EA
Sbjct: 379 LVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAK 438
Query: 75 GILRDMAKRG-LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
++ +M +G PDV TY ++ GFC+ G++ KA ++ M G P+ +Y L+
Sbjct: 439 DLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNG 498
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
+CR G+ +A ++ SP+ Y+ +M+ +G+ S+A D+ EM+ KGF P
Sbjct: 499 MCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPG 558
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
+ +L+ + C GR EA + + G + +VV++T VI GFC+ E
Sbjct: 559 PVEINLL-----LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDEL--- 610
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEM----- 308
+ + + +D+Y L++ +D TY+TL++ +G + +A L +M
Sbjct: 611 --------DAALSVLDDMY--LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Query: 309 --SEYSYLT-----------DDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYR 355
+ +Y T DD+++ + +K + + R++ + +
Sbjct: 661 DPTPVTYRTVIHRYCQMGKVDDLVAIL------EKMISRQKCRTIYNQVIEKLCVLGKLE 714
Query: 356 TYDTL----IENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPE 403
DTL + S ++ KT L++ + +G+ A K +M + N P+
Sbjct: 715 EADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPD 766
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 6/165 (3%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++ +A ++K M+ +G P+ TY +IH YC+ + + V IL M R + Y
Sbjct: 644 RIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YN 701
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
+I C GKL +A + K++ DA T L+ +KG A+ + M
Sbjct: 702 QVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNR 761
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPS 198
+ P + +L KG+ +A L ++ +G ISP
Sbjct: 762 NLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGH----ISPQ 802
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DP + +H + +VD +L+ MI R ++ YN++I C + +EA
Sbjct: 660 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEAD 717
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L + + D T Y L+ G+ + G A+++ +M ++ ++PD L L
Sbjct: 718 TLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRL 777
Query: 135 CRKGRLSKAFDLFLEMLREG-VSPH 158
KG++ +A L L ++ G +SP
Sbjct: 778 VLKGKVDEADKLMLRLVERGHISPQ 802
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 184/425 (43%), Gaps = 80/425 (18%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+ D+A +L M RG P+V +YN ++ G+CR A + ++ ++GL P+ TY
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYS 517
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G + A E+ M I + Y +I LC+ G+ SKA +L M+ E
Sbjct: 518 ILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Query: 154 G-VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVL 212
+ Y +++ + +GE A+ +EM +GISP+++ Y + ++G C
Sbjct: 578 KRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCG-----NGISPNVITYTSLMNGLCKN 632
Query: 213 GRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI----PLY 268
R+++AL + M + G+ D+ +Y +I GFCK A L E+ E+G+ P+Y
Sbjct: 633 NRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIY 692
Query: 269 E----------------DIYQSLLDD--LSDEVTYSTLINDFHAQGNLMDAYCLESEMSE 310
D+Y+ +L D D TY+TLI+ GNL+ A L +EM
Sbjct: 693 NSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQA 752
Query: 311 YSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFK 370
+ D++I +V +NGL+KK +
Sbjct: 753 VGLVPDEIIYTVIVNGLSKKGQFV------------------------------------ 776
Query: 371 TVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKET 430
K K ++M N P IYN +I H R GN+ +A+ ++ E
Sbjct: 777 ----------------KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Query: 431 VHSGV 435
+ G+
Sbjct: 821 LDKGI 825
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 19/302 (6%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIV-RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
++ L V Q KA +L MI + S +YN +I G+ + AV +M G
Sbjct: 555 INGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG 614
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
+SP+V TY L+ G C+ ++ +A EM+ +M +KG+ D YG LI C++ + A
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 145 DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
LF E+L EG++P + IY L++ + G ALDL +M L DG+ L Y
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM-----LKDGLRCDLGTYTT 729
Query: 205 RIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
I G G + A + M +GL PD + YT ++ G K G+ VK ++ EM +
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 265 IPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRI 324
+ + + Y+ +I + +GNL +A+ L EM + L D + +
Sbjct: 790 VT-------------PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Query: 325 NG 326
+G
Sbjct: 837 SG 838
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 120/242 (49%), Gaps = 5/242 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ P+ S ++ L ++D+A M M +G + Y LI G+C+ + A
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ ++ + GL+P Y LI GF G + A ++ KM+ G+ D TY LI L
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 734
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ G L A +L+ EM G+ P + IYT ++N KG+F K + + +EM +
Sbjct: 735 LKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK-----NN 789
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
++P+++IYNA I G G ++EA + M D G+ PD ++ ++ G +PV+A
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAA 849
Query: 255 EL 256
L
Sbjct: 850 SL 851
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 177/434 (40%), Gaps = 65/434 (14%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLS-PDVDTYYPL 95
+A +L I RG P Y+ + C+ A +LR+M ++ L P +TY +
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSV 310
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
I + G + A +K +M+ GI + LI C+ L A LF +M +EG
Sbjct: 311 ILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP 370
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD---------------------- 193
SP+ ++ L+ ++ GE KAL+ +M G P
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 194 --------GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFC 245
G++ ++ + N + C G+ +EA +L M G+ P+VVSY NV+ G C
Sbjct: 431 LFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 246 KIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDD--LSDEVTYSTLINDFHAQGNLMDAYC 303
+ +K + L ++ ++L+ + TYS LI+ + +A
Sbjct: 490 R---------------QKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE 534
Query: 304 LESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN 363
+ + M+ + + V+ INGL K T +A+ L + L + +Y+++I+
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM-SYNSIIDG 593
Query: 364 CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKA 423
F G A A+++M P Y L+ C++ + +A
Sbjct: 594 ---------------FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQA 638
Query: 424 YDMYKETVHSGVEI 437
+M E + GV++
Sbjct: 639 LEMRDEMKNKGVKL 652
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 156/392 (39%), Gaps = 43/392 (10%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI----CGFCQTGK 104
GF + +N L++ Y + + AV I+ M L DV ++P + Q
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM----LELDVIPFFPYVNRTLSALVQRNS 213
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
L +A E+ ++MV G+ D T +L+ R+ + ++A ++ + G P +Y+
Sbjct: 214 LTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSL 273
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
+ C + + A L EM K PS Y + I G +++A+ +
Sbjct: 274 AVQACCKTLDLAMANSLLREMKEKKL----CVPSQETYTSVILASVKQGNMDDAIRLKDE 329
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT 284
M G+S +VV+ T++I G CK + V A L +M+++G + VT
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS-------------PNSVT 376
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWF 344
+S LI F G + A +M E LT V ++++ +
Sbjct: 377 FSVLIEWFRKNGEMEKALEFYKKM-EVLGLTPSVFHV----------------HTIIQGW 419
Query: 345 YQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEG 404
+ A + +D E N F ++ +G +A + KM P
Sbjct: 420 LKGQKHEEALKLFDESFETGLANVF-VCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478
Query: 405 AIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
YN ++ HCR N+ A ++ + G++
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 174/373 (46%), Gaps = 20/373 (5%)
Query: 14 ILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEA 73
I D +E + V L +++ A L+ + PSV ++N ++ GYC+ A
Sbjct: 182 IKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMA 241
Query: 74 VGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
+ K GL P V ++ LI G C G + +A E+ + M G+ PD+ TY IL
Sbjct: 242 KSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
G +S A+++ +ML +G+SP YT L+ C G L L +M+++GF +
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
I P V+ + G C GR++EAL + M GLSPD+V+Y+ VI G CK+G+ A
Sbjct: 362 SIIPCSVM----LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
L EM +K I L + T+ L+ +G L++A L +
Sbjct: 418 LWLYDEMCDKRI-------------LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464
Query: 314 LTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTV 372
D V+ ++ I+G K+ IE L + + ++ P+ T+++LI C
Sbjct: 465 TLDIVLYNIVIDGY-AKSGCIEEALELFKVVIETGIT-PSVATFNSLIYGYCKTQNIAEA 522
Query: 373 VGLVKDFSMRGLA 385
++ + GLA
Sbjct: 523 RKILDVIKLYGLA 535
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 178/404 (44%), Gaps = 47/404 (11%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
VD + +LK M + + S +YN +++ + D+ + ++D + TY
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYST 192
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
++ G C+ KL A K I P ++ ++ C+ G + A F +L+ G
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 252
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+ P Y + L+N C G ++AL+L +M G PD ++ YN G +LG
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT-----YNILAKGFHLLGM 307
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
+ A ++R M D GLSPDV++YT ++ G C++G L +M +G
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF--------- 358
Query: 275 LLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTI 334
+L+ + S +++ G + +A L ++M D V S+ I+GL K
Sbjct: 359 ---ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL---- 411
Query: 335 EAKRSLVRWFYQDCLS---IPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKA 391
K + W Y + +P RT+ L+ +GL + +G+ +A
Sbjct: 412 -GKFDMALWLYDEMCDKRILPNSRTHGALL-----------LGLCQ----KGMLLEARSL 455
Query: 392 HDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
D ++ + +YN++I + + G + +A +++K + +G+
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 170/397 (42%), Gaps = 51/397 (12%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++D+A ++ M G SP + Y+ +IHG C+ +F A+ + +M + + P+ T+
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ G CQ G L +A + ++ G D Y I+I + G + +A +LF ++
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G++P + L+ YC ++A + D + K + G++PS+V Y + G
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILD--VIKLY---GLAPSVVSYTTLMDAYANCG 552
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
+ + R M G+ P V+Y+ + KG C+ + + E ++E Q
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE------RIFEKCKQ 606
Query: 274 SLLDDLS-----DEVTYSTLINDF----HAQG-----NLMDAYCLESEMSEYSYLTDDVI 319
L D S D++TY+T+I H G +M + L++ + Y+ L D
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID--- 663
Query: 320 SSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDF 379
S+ + G +KA + Y +N S ++F L+K
Sbjct: 664 -SLCVYGYIRKADSF---------------------IYSLQEQNVSLSKFAYTT-LIKAH 700
Query: 380 SMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCR 416
++G A K ++LH + Y+ +I CR
Sbjct: 701 CVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 17/281 (6%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
KA L PD +H L + + D A + M + P+ T+ L+ G C+
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
EA +L + G + D+ Y +I G+ ++G + +A E+ ++ GI P T+ L
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
I C+ +++A + + G++P YT LM+ Y G +L EM
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM----- 564
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILR---------GMADM---GLSPDVVSYT 238
+GI P+ V Y+ G C + E +LR G+ DM G+ PD ++Y
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYN 624
Query: 239 NVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
+I+ C++ AF M + + Y L+D L
Sbjct: 625 TIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 174/373 (46%), Gaps = 20/373 (5%)
Query: 14 ILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEA 73
I D +E + V L +++ A L+ + PSV ++N ++ GYC+ A
Sbjct: 182 IKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMA 241
Query: 74 VGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
+ K GL P V ++ LI G C G + +A E+ + M G+ PD+ TY IL
Sbjct: 242 KSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
G +S A+++ +ML +G+SP YT L+ C G L L +M+++GF +
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
I P V+ + G C GR++EAL + M GLSPD+V+Y+ VI G CK+G+ A
Sbjct: 362 SIIPCSVM----LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
L EM +K I L + T+ L+ +G L++A L +
Sbjct: 418 LWLYDEMCDKRI-------------LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464
Query: 314 LTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTV 372
D V+ ++ I+G K+ IE L + + ++ P+ T+++LI C
Sbjct: 465 TLDIVLYNIVIDGY-AKSGCIEEALELFKVVIETGIT-PSVATFNSLIYGYCKTQNIAEA 522
Query: 373 VGLVKDFSMRGLA 385
++ + GLA
Sbjct: 523 RKILDVIKLYGLA 535
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 178/404 (44%), Gaps = 47/404 (11%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
VD + +LK M + + S +YN +++ + D+ + ++D + TY
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH-------TYST 192
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
++ G C+ KL A K I P ++ ++ C+ G + A F +L+ G
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 252
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+ P Y + L+N C G ++AL+L +M G PD ++ YN G +LG
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT-----YNILAKGFHLLGM 307
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
+ A ++R M D GLSPDV++YT ++ G C++G L +M +G
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF--------- 358
Query: 275 LLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTI 334
+L+ + S +++ G + +A L ++M D V S+ I+GL K
Sbjct: 359 ---ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL---- 411
Query: 335 EAKRSLVRWFYQDCLS---IPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKA 391
K + W Y + +P RT+ L+ +GL + +G+ +A
Sbjct: 412 -GKFDMALWLYDEMCDKRILPNSRTHGALL-----------LGLCQ----KGMLLEARSL 455
Query: 392 HDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
D ++ + +YN++I + + G + +A +++K + +G+
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 170/397 (42%), Gaps = 51/397 (12%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++D+A ++ M G SP + Y+ +IHG C+ +F A+ + +M + + P+ T+
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ G CQ G L +A + ++ G D Y I+I + G + +A +LF ++
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G++P + L+ YC ++A + D + K + G++PS+V Y + G
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILD--VIKLY---GLAPSVVSYTTLMDAYANCG 552
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
+ + R M G+ P V+Y+ + KG C+ + + E ++E Q
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE------RIFEKCKQ 606
Query: 274 SLLDDLS-----DEVTYSTLINDF----HAQG-----NLMDAYCLESEMSEYSYLTDDVI 319
L D S D++TY+T+I H G +M + L++ + Y+ L D
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID--- 663
Query: 320 SSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDF 379
S+ + G +KA + Y +N S ++F L+K
Sbjct: 664 -SLCVYGYIRKADSF---------------------IYSLQEQNVSLSKFAYTT-LIKAH 700
Query: 380 SMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCR 416
++G A K ++LH + Y+ +I CR
Sbjct: 701 CVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 17/281 (6%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
KA L PD +H L + + D A + M + P+ T+ L+ G C+
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
EA +L + G + D+ Y +I G+ ++G + +A E+ ++ GI P T+ L
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
I C+ +++A + + G++P YT LM+ Y G +L EM
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM----- 564
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILR---------GMADM---GLSPDVVSYT 238
+GI P+ V Y+ G C + E +LR G+ DM G+ PD ++Y
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYN 624
Query: 239 NVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
+I+ C++ AF M + + Y L+D L
Sbjct: 625 TIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 165/365 (45%), Gaps = 55/365 (15%)
Query: 20 RNLLSQVHSLLNVYQV-------DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKE 72
R L+ VH ++Q K +L M G P+V Y I CR ++ +E
Sbjct: 193 RGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEE 252
Query: 73 AVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILIL 132
A + M K G+ P++ TY +I G+C+TG + +A+ + +++ +LP+ +G L+
Sbjct: 253 AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 133 TLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLP 192
C+ L A LF+ M++ GV P+ Y+Y L++ +C G +A+ L EM + P
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 193 D------------------------------GISPSLVIYNARIHGCCVLGRVEEALGIL 222
D I PS YN+ IHG C +E+AL +
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 223 RGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDE 282
M G+ P++++++ +I G+C + + A L EM KGI + D
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI-------------VPDV 479
Query: 283 VTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVR 342
VTY+ LI+ + N+ +A L S+M E +D + ++G K E + S+
Sbjct: 480 VTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK-----EGRLSVAI 534
Query: 343 WFYQD 347
FYQ+
Sbjct: 535 DFYQE 539
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 182/421 (43%), Gaps = 72/421 (17%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
PD + LS ++ L+ + D + MI RG P V Y L + + +
Sbjct: 161 SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEK 220
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+L +M G+ P+V Y I C+ K+ +A +M M G+LP+ TY +I C
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
+ G + +A+ L+ E+L + P+ ++ L++ +C E A L M+ G+
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKF-----GV 335
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
P+L +YN IHG C G + EA+G+L M + LSPDV +YT +I G C + +A
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANR 395
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLT 315
L +M E I+ S TY++LI+ + + N+ A L SEM+
Sbjct: 396 LFQKMKN------ERIFPS-------SATYNSLIHGYCKEYNMEQALDLCSEMT------ 436
Query: 316 DDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVG 374
A+ +E P T+ TLI+ C+ + K +G
Sbjct: 437 ---------------ASGVE----------------PNIITFSTLIDGYCNVRDIKAAMG 465
Query: 375 LVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
L + +++G+ P+ Y LI H + N+ +A +Y + + +G
Sbjct: 466 LYFEMTIKGIV----------------PDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 435 V 435
+
Sbjct: 510 I 510
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 118/226 (52%), Gaps = 5/226 (2%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A ++ +M+ G P++ YN LIHG+C++ EAVG+L +M LSPDV TY LI
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
G C ++ +A + KM ++ I P + TY LI C++ + +A DL EM GV P
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+ ++ L++ YC + A+ L EM KG +PD +V Y A I ++E
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD-----VVTYTALIDAHFKEANMKE 497
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
AL + M + G+ P+ ++ ++ GF K G A + E +++
Sbjct: 498 ALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 5/251 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD ++ L QV +A+ + + M PS ATYN LIHGYC+ ++A+
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ +M G+ P++ T+ LI G+C + A + +M KGI+PD TY LI
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
++ + +A L+ +ML G+ P+ + + L++ + +G S A+D E + +
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNH 549
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ + I G C G + A M G++PD+ SY +++KG +
Sbjct: 550 VG-----FTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM 604
Query: 255 ELKLEMDEKGI 265
L+ +M + GI
Sbjct: 605 MLQCDMIKTGI 615
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 167/383 (43%), Gaps = 38/383 (9%)
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMK 112
S+ ++ LI + F+EA+ + R+M SPD ++ G + + +
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDY 187
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
M+ +G++PD Y +L ++G SK L EM G+ P+ YIYT + C
Sbjct: 188 QLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
+ +A + + M G LP+ L Y+A I G C G V +A G+ + + L P
Sbjct: 248 NKMEEAEKMFELMKKHGVLPN-----LYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP 302
Query: 233 DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDF 292
+VV + ++ GFCK E V A L + M + G+ ++Y Y+ LI+
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD--PNLY-----------VYNCLIHGH 349
Query: 293 HAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIP 352
GN+++A L SEM + D ++ INGL + EA R + ++ P
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM--KNERIFP 407
Query: 353 AYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIF 412
+ TY++LI G K+++M +A +M +P ++ LI
Sbjct: 408 SSATYNSLIH-----------GYCKEYNM----EQALDLCSEMTASGVEPNIITFSTLID 452
Query: 413 DHCRHGNVHKAYDMYKETVHSGV 435
+C ++ A +Y E G+
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGI 475
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 149/350 (42%), Gaps = 40/350 (11%)
Query: 88 DVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLF 147
+ + LI F + G +A + +M PD+ ++ L R+ R + +
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDY 187
Query: 148 LEMLREGVSPHKYIYTRLMNYYCFK-GEFSKALDLPDEMINKGFLPDGISPSLVIYNARI 206
M+ G+ P +IY L CFK G +SK L DEM + G I P++ IY I
Sbjct: 188 QLMISRGLVPDVHIYFVLFQC-CFKQGLYSKKEKLLDEMTSLG-----IKPNVYIYTIYI 241
Query: 207 HGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIP 266
C ++EEA + M G+ P++ +Y+ +I G+CK G +A+
Sbjct: 242 LDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY-----------G 290
Query: 267 LYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRING 326
LY++I + L L + V + TL++ F L+ A L M ++ + + + I+G
Sbjct: 291 LYKEILVAEL--LPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 327 LNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAH 386
K +EA + ++L N S + F + L+ +
Sbjct: 349 HCKSGNMLEA--------------VGLLSEMESL--NLSPDVFTYTI-LINGLCIEDQVA 391
Query: 387 KAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
+A + KM + P A YN LI +C+ N+ +A D+ E SGVE
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVE 441
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%)
Query: 7 CKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCR 66
C A ++P+ + + NV + A + M ++G P V TY LI + +
Sbjct: 432 CSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Query: 67 ADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADT 126
KEA+ + DM + G+ P+ T+ L+ GF + G+L A + + + +
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVG 551
Query: 127 YGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMI 186
+ LI LC+ G + +A F +M G++P Y ++ + + + + L +MI
Sbjct: 552 FTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMI 611
Query: 187 NKGFLPDGISPSLV 200
G LP+ + L+
Sbjct: 612 KTGILPNLLVNQLL 625
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 204/436 (46%), Gaps = 57/436 (13%)
Query: 29 LLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPD 88
LLNV ++D+ + K M G+ +V T+N +I+ +C+ + EA+ + M K G+ P+
Sbjct: 193 LLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPN 252
Query: 89 VDTYYPLICGFCQTGKLGKAFEMKAKM-VHKG--ILPDADTYGILILTLCRKGRLSKAFD 145
V ++ +I G C+TG + A ++ KM + G + P+A TY +I C+ GRL A
Sbjct: 253 VVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAER 312
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
+ +M++ GV ++ Y L++ Y G +AL L DEM +KG + + VIYN+
Sbjct: 313 IRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVN-----TVIYNSI 367
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
++ + G +E A+ +LR M + D + V++G C+ G +A E + ++ EK
Sbjct: 368 VYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEK-- 425
Query: 266 PLYEDIY-----------------------QSLLDDLS-DEVTYSTLINDFHAQGNLMDA 301
L EDI L+ LS D +++ TLI+ + +G L A
Sbjct: 426 KLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERA 485
Query: 302 YCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLI 361
+ M + + ++ VI + +NGL+K+ A+ + + + I TY+TL+
Sbjct: 486 LEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVV------NAMEIKDIVTYNTLL 539
Query: 362 ENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLH--GNYKPEGAIYNLLIFDHCRHGN 419
N KT G +A KM G +N++I C+ G+
Sbjct: 540 ----NESLKT-----------GNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGS 584
Query: 420 VHKAYDMYKETVHSGV 435
KA ++ K V GV
Sbjct: 585 YEKAKEVLKFMVERGV 600
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 161/377 (42%), Gaps = 42/377 (11%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
SP+ TYN +I+G+C+A R A I DM K G+ + TY L+ + + G +A
Sbjct: 288 SPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALR 347
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
+ +M KG++ + Y ++ L +G + A + +M + + ++ ++ C
Sbjct: 348 LCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLC 407
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
G +A++ ++ K + D +V +N +H ++ A IL M GL
Sbjct: 408 RNGYVKEAVEFQRQISEKKLVED-----IVCHNTLMHHFVRDKKLACADQILGSMLVQGL 462
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS---------- 280
S D +S+ +I G+ K G+ +A E+ M + IY S+++ LS
Sbjct: 463 SLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEA 522
Query: 281 --------DEVTYSTLINDFHAQGNLMDAYCLESEMSEY--SYLTDDVISSVRINGLNKK 330
D VTY+TL+N+ GN+ +A + S+M + V ++ IN L K
Sbjct: 523 VVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKF 582
Query: 331 ATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAK 390
+ +AK L F + +P TY TLI + FS K +
Sbjct: 583 GSYEKAKEVLK--FMVERGVVPDSITYGTLITS---------------FSKHRSQEKVVE 625
Query: 391 AHDKMLHGNYKPEGAIY 407
HD ++ P IY
Sbjct: 626 LHDYLILQGVTPHEHIY 642
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 28/275 (10%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
++ A ++L+ M + T ++ G CR KEAV R ++++ L D+ +
Sbjct: 377 IEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNT 436
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
L+ F + KL A ++ M+ +G+ DA ++G LI ++G+L +A +++ M++
Sbjct: 437 LMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMN 496
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKA---------------------------LDLPDEMIN 187
+ + IY ++N +G A ++ D++++
Sbjct: 497 KTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILS 556
Query: 188 KGFLPDG-ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCK 246
K DG S SLV +N I+ C G E+A +L+ M + G+ PD ++Y +I F K
Sbjct: 557 KMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSK 616
Query: 247 IGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD 281
K EL + +G+ +E IY S++ L D
Sbjct: 617 HRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLD 651
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 41/306 (13%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+D +ER + V + D+A + M +G + YN +++ + A+
Sbjct: 322 VDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAM 381
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+LRDM + + D T ++ G C+ G + +A E + ++ K ++ D + L+
Sbjct: 382 SVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHF 441
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMI--NK---- 188
R +L+ A + ML +G+S + L++ Y +G+ +AL++ D MI NK
Sbjct: 442 VRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNL 501
Query: 189 --------GFLPDGISPS------------LVIYNARIHGCCVLGRVEEALGILRGM--A 226
G G++ + +V YN ++ G VEEA IL M
Sbjct: 502 VIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQ 561
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYS 286
D S +V++ +I CK G KA E+ M E+G+ + D +TY
Sbjct: 562 DGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGV-------------VPDSITYG 608
Query: 287 TLINDF 292
TLI F
Sbjct: 609 TLITSF 614
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 170/431 (39%), Gaps = 91/431 (21%)
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM--------VHK-------- 118
G++R G SPDV + L+ Q G A+E+ + VH
Sbjct: 136 GLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCL 193
Query: 119 -------------------GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHK 159
G + + +T+ ++I + C++ +L +A +F ML+ GV P+
Sbjct: 194 LNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNV 253
Query: 160 YIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG-ISPSLVIYNARIHGCCVLGRVEEA 218
+ +++ C G+ AL L +M G + +SP+ V YN+ I+G C GR++ A
Sbjct: 254 VSFNMMIDGACKTGDMRFALQLLGKM---GMMSGNFVSPNAVTYNSVINGFCKAGRLDLA 310
Query: 219 LGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSL--- 275
I M G+ + +Y ++ + + G +A L EM KG+ + IY S+
Sbjct: 311 ERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYW 370
Query: 276 -------------LDDLS------DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL-- 314
L D++ D T + ++ G + +A + ++SE +
Sbjct: 371 LFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVED 430
Query: 315 -------------------TDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYR 355
D ++ S+ + GL+ A + +L+ + ++ A
Sbjct: 431 IVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFG---TLIDGYLKEGKLERALE 487
Query: 356 TYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHC 415
YD +I+ + +V S RG+A A + M + YN L+ +
Sbjct: 488 IYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM----EIKDIVTYNTLLNESL 543
Query: 416 RHGNVHKAYDM 426
+ GNV +A D+
Sbjct: 544 KTGNVEEADDI 554
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 184/413 (44%), Gaps = 77/413 (18%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
M+ G+ P + T N L++G+C +R +AV ++ M + G PD T+ LI G K
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
+A + +MV +G PD TYG ++ LC++G A +L +M + + IY+
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
+++ C AL+L EM NK G+ P+++ Y++ I C GR +A +L
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENK-----GVRPNVITYSSLISCLCNYGRWSDASRLLSD 313
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT 284
M + ++P++V+++ +I F K G+ VKA EK LYE++ + +D + T
Sbjct: 314 MIERKINPNLVTFSALIDAFVKKGKLVKA--------EK---LYEEMIKRSID--PNIFT 360
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWF 344
YS+LIN F C+ + EAK+ L
Sbjct: 361 YSSLINGF----------CMLDRLG-------------------------EAKQMLELMI 385
Query: 345 YQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYK-- 401
+DCL P TY+TLI C + L ++ S RGL + ++HG ++
Sbjct: 386 RKDCL--PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV-TYTTLIHGFFQAR 442
Query: 402 ------------------PEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
P YN+L+ C++G + KA +++ S +E
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 9/241 (3%)
Query: 10 NKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADR 69
NK V P+ S + L N + A +L MI R +P++ T++ LI + + +
Sbjct: 281 NKGV--RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 70 FKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGI 129
+A + +M KR + P++ TY LI GFC +LG+A +M M+ K LP+ TY
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPD-EMINK 188
LI C+ R+ K +LF EM + G+ + YT L++ F +A D + +M+ K
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH------GFFQARDCDNAQMVFK 452
Query: 189 GFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
+ G+ P+++ YN + G C G++ +A+ + + + PD+ +Y +I+G CK G
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Query: 249 E 249
+
Sbjct: 513 K 513
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 89/161 (55%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DP+ S ++ + ++ +A ML+ MI + P+V TYN LI+G+C+A R + +
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ R+M++RGL + TY LI GF Q A + +MV G+ P+ TY IL+ L
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
C+ G+L+KA +F + R + P Y Y ++ C G++
Sbjct: 474 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 179/434 (41%), Gaps = 68/434 (15%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
+A + + M GFS TYN L+ Y ++ R KEA+ +L +M G SP + TY LI
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
+ + G L +A E+K +M KG PD TY L+ R G++ A +F EM G
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD----------------------- 193
P+ + + Y +G+F++ + + DE+ G PD
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 194 -------GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCK 246
G P +N I G E+A+ + R M D G++PD+ +Y V+ +
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 247 IGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLES 306
G E EK + ED +E+TY +L++ AY
Sbjct: 537 GG--------MWEQSEKVLAEMEDGRCK-----PNELTYCSLLH----------AYANGK 573
Query: 307 EMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDC----LSIPAYRTYDTLIE 362
E+ L ++V S V IE + L++ C L A R + L E
Sbjct: 574 EIGLMHSLAEEVYSGV-----------IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 363 NCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHK 422
+ + T+ +V + R + KA D M + P A YN L++ H R + K
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 423 AYDMYKETVHSGVE 436
+ ++ +E + G++
Sbjct: 683 SEEILREILAKGIK 696
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 186/420 (44%), Gaps = 59/420 (14%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+V A NM + GFS V +Y LI + + R++EAV + + M + G P + TY
Sbjct: 188 RVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYN 247
Query: 94 PLICGFCQTGK-LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRL-SKAFDLFLEML 151
++ F + G K + KM GI PDA TY LI T C++G L +A +F EM
Sbjct: 248 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMK 306
Query: 152 REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCV 211
G S K Y L++ Y +A+ + +EM+ GF SPS+V YN+ I
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF-----SPSIVTYNSLISAYAR 361
Query: 212 LGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDI 271
G ++EA+ + MA+ G PDV +YT ++ GF + G+ A + EM G
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK----- 416
Query: 272 YQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRI------N 325
+ T++ I + +G + + E++ L+ D+++ + N
Sbjct: 417 --------PNICTFNAFIKMYGNRGKFTEMMKIFDEIN-VCGLSPDIVTWNTLLAVFGQN 467
Query: 326 GLNKKATTI--EAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRG 383
G++ + + + E KR+ +P T++TLI +S G
Sbjct: 468 GMDSEVSGVFKEMKRAGF---------VPERETFNTLIS---------------AYSRCG 503
Query: 384 LAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPS 443
+A + +ML P+ + YN ++ R G ++ E V + +E GR +P+
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS-----EKVLAEMEDGRCKPN 558
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 182/415 (43%), Gaps = 43/415 (10%)
Query: 27 HSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
+SL++ Y +D+A + M +G P V TY L+ G+ RA + + A+ I +M
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
G P++ T+ I + GK + ++ ++ G+ PD T+ L+ + G S+
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIY 202
+F EM R G P + + L++ Y G F +A+ + M++ G PD L Y
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD-----LSTY 527
Query: 203 NARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
N + G E++ +L M D P+ ++Y +++ + G+ +
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN-GKEIGLMH------- 579
Query: 263 KGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD--DVIS 320
L E++Y +++ + V TL+ L +A SE+ E + D + S
Sbjct: 580 ---SLAEEVYSGVIEPRA--VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNS 634
Query: 321 SVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFS 380
V I G + + AK + V + ++ P+ TY++L+ S + DF
Sbjct: 635 MVSIYGRRQ----MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRS---------ADFG 681
Query: 381 MRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
K+ + ++L KP+ YN +I+ +CR+ + A ++ E +SG+
Sbjct: 682 ------KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+ ++A + LK RGFSP + T N ++ Y R +A G+L M +RG +P + TY
Sbjct: 612 EAERAFSELKE---RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ ++ GK+ E+ +++ KGI PD +Y +I CR R+ A +F EM
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ P Y + Y F +A+ + MI G P+ + YN+ + G C L
Sbjct: 729 GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNT-----YNSIVDGYCKLN 783
Query: 214 RVEEA 218
R +EA
Sbjct: 784 RKDEA 788
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 23 LSQVHSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILR 78
++ ++S++++Y V KA+ +L YM RGF+PS+ATYN L++ + R+ F ++ ILR
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 79 DMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKG 138
++ +G+ PD+ +Y +I +C+ ++ A + ++M + GI+PD TY I +
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 139 RLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
+A + M++ G P++ Y +++ YC
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC 780
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 5/237 (2%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P+E S +H+ N ++ H++ + + P L+ + D EA
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
++ +RG SPD+ T ++ + + + KA + M +G P TY L+ R
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
K+ ++ E+L +G+ P Y ++ YC A + EM N G +PD
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD--- 733
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
++ YN I EEA+G++R M G P+ +Y +++ G+CK+ +A
Sbjct: 734 --VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 158/379 (41%), Gaps = 64/379 (16%)
Query: 107 KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLM 166
+AF+ K + D I+I L ++GR+S A ++F + +G S Y YT L+
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLI 215
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRV----EEALGIL 222
+ + G + +A+++ +M DG P+L+ YN ++ V G++ + ++
Sbjct: 216 SAFANSGRYREAVNVFKKMEE-----DGCKPTLITYNVILN---VFGKMGTPWNKITSLV 267
Query: 223 RGMADMGLSPDVVSYTNVIKGFCKIG----EPVKAFELKLEMDEKGIPLYEDIYQSLLDD 278
M G++PD +Y +I CK G E + FE EM G + Y +LLD
Sbjct: 268 EKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFE---EMKAAGFSYDKVTYNALLDV 323
Query: 279 LSDE----------------------VTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
VTY++LI+ + G L +A L+++M+E D
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 317 DVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKT----- 371
+ ++G ++A +E+ S+ ++ P T++ I+ N T
Sbjct: 384 VFTYTTLLSGF-ERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 372 -----VVGLVKD----------FSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCR 416
V GL D F G+ + + +M + PE +N LI + R
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Query: 417 HGNVHKAYDMYKETVHSGV 435
G+ +A +Y+ + +GV
Sbjct: 502 CGSFEQAMTVYRRMLDAGV 520
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 32/273 (11%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
++A + + M+ G +P ++TYN ++ R ++++ +L +M P+ TY L
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGIL-PDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
+ + ++G + A+ V+ G++ P A L+L + L +A F E+ G
Sbjct: 566 LHAYANGKEIGLMHSL-AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD--------------------- 193
SP +++ Y + +KA + D M +GF P
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 194 ---------GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGF 244
GI P ++ YN I+ C R+ +A I M + G+ PDV++Y I +
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 245 CKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
+A + M + G ++ Y S++D
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD 777
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 196/442 (44%), Gaps = 52/442 (11%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
++ A N+ M VRG P ++Y ++ G R + +EA L M +RG PD T
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
++ C+ G + +A KM+ G P+ + LI LC+KG + +AF++ EM+R G
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
P+ Y +T L++ C +G KA L +++ D P++ Y + I G C +
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR----SDTYKPNVHTYTSMIGGYCKEDK 373
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
+ A + M + GL P+V +YT +I G CK G +A+EL M ++G Y +
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433
Query: 275 LLDDL----------------------SDEVTYSTLINDFHAQGNLMDAYCLESEMSEYS 312
+D L +D VTY+ LI + Q ++ A M++
Sbjct: 434 AIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTG 493
Query: 313 YLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLS---IPAYRTYDTLIENCSNNEF 369
+ D ++++ I ++ E++R +Q +S IP TY ++I +C E
Sbjct: 494 FEADMRLNNILIAAFCRQKKMKESER-----LFQLVVSLGLIPTKETYTSMI-SCYCKEG 547
Query: 370 KTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKE 429
+ L K F H+ HG P+ Y LI C+ V +A +Y+
Sbjct: 548 DIDLAL-KYF------------HNMKRHGCV-PDSFTYGSLISGLCKKSMVDEACKLYEA 593
Query: 430 TVHSGV---EIGRAEPSFTWPR 448
+ G+ E+ R ++ + +
Sbjct: 594 MIDRGLSPPEVTRVTLAYEYCK 615
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 186/404 (46%), Gaps = 38/404 (9%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++++A M+ M +G +PS T N ++ + A + +M+ RG+ PD +Y
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
++ G + GK+ +A M+ +G +PD T +++ LC G +++A F +M+
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G P+ +T L++ C KG +A ++ +EM+ G+ P++ + A I G C G
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW-----KPNVYTHTALIDGLCKRG 336
Query: 214 RVEEALGI-LRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIY 272
E+A + L+ + P+V +YT++I G+CK + +A L M E+G L+ ++
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG--LFPNVN 394
Query: 273 QSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKAT 332
TY+TLIN G+ AY L + M + ++ + + I+ L KK+
Sbjct: 395 -----------TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 333 TIEAKRSLVRWFYQDCLSIPAYRTYDTLI-ENCSNNEFKTVVGLVKDFSMRGLAHKAAKA 391
EA L + F C TY LI E C N+ ++A
Sbjct: 444 APEAYELLNKAF--SCGLEADGVTYTILIQEQCKQNDI----------------NQALAF 485
Query: 392 HDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+M ++ + + N+LI CR + ++ +++ V G+
Sbjct: 486 FCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 162/352 (46%), Gaps = 37/352 (10%)
Query: 1 MMITASCKN---NKAV-----ILD----PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVR 48
+++TA C+N N+A+ ++D P+ N S + L + +A ML+ M+
Sbjct: 257 LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 316
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL-SPDVDTYYPLICGFCQTGKLGK 107
G+ P+V T+ LI G C+ ++A + + + P+V TY +I G+C+ KL +
Sbjct: 317 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 108 AFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
A + ++M +G+ P+ +TY LI C+ G +A++L M EG P+ Y Y ++
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 168 YYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMAD 227
C K +A +L ++ + G DG++ +++I C + +AL M
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ-----CKQNDINQALAFFCRMNK 491
Query: 228 MGLSPDVVSYTNVIKGFC---KIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT 284
G D+ +I FC K+ E + F+L + + IP E T
Sbjct: 492 TGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL--IPTKE--------------T 535
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEA 336
Y+++I+ + +G++ A M + + D I+GL KK+ EA
Sbjct: 536 YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 182/417 (43%), Gaps = 49/417 (11%)
Query: 20 RNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRD 79
R L SLL + KAH +++ M+ R FS R EAVG++ D
Sbjct: 128 RLYLVTADSLLANGNLQKAHEVMRCML-RNFS--------------EIGRLNEAVGMVMD 172
Query: 80 MAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
M +GL+P T ++ + G + A + +M +G++PD+ +Y ++++ R G+
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
+ +A M++ G P T ++ C G ++A+ +MI+ GF P+L
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGF-----KPNL 287
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
+ + + I G C G +++A +L M G P+V ++T +I G CK G KAF L L+
Sbjct: 288 INFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLK 347
Query: 260 MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
+ + D Y+ + TY+++I + + L A L S M E +
Sbjct: 348 L------VRSDTYKPNVH------TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 320 SSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDF 379
+ ING + KA + L+ + +P TY+ I++
Sbjct: 396 YTTLING-HCKAGSFGRAYELMNLMGDEGF-MPNIYTYNAAIDS---------------L 438
Query: 380 SMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
+ A +A + +K + +G Y +LI + C+ ++++A + +G E
Sbjct: 439 CKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE 495
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 43/284 (15%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++++A + M +G P+V TY LI+G+C+A F A ++ M G P++ TY
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM--- 150
I C+ + +A+E+ K G+ D TY ILI C++ +++A F M
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 151 ---------------------LRE-----------GVSPHKYIYTRLMNYYCFKGEFSKA 178
++E G+ P K YT +++ YC +G+ A
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYT 238
L M G +PD + Y + I G C V+EA + M D GLSP V+
Sbjct: 553 LKYFHNMKRHGCVPDSFT-----YGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRV 607
Query: 239 NVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDE 282
+ +CK + A L +D+K L+ ++L+ L E
Sbjct: 608 TLAYEYCKRNDSANAMILLEPLDKK---LWIRTVRTLVRKLCSE 648
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
+ + SL + +A+ +L G TY LI C+ + +A+ M K
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
G D+ LI FC+ K+ ++ + +V G++P +TY +I C++G + A
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIY 202
F M R G P + Y L++ C K +A L + MI++G P ++ + Y
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAY 611
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 127/250 (50%), Gaps = 5/250 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ P L V +LLN + + LK M V G SV +YN +I C+A R + A
Sbjct: 386 VKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAA 445
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
L +M RG+SP++ T+ + G+ G + K + K++ G PD T+ ++I L
Sbjct: 446 MFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCL 505
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
CR + AFD F EML G+ P++ Y L+ C G+ +++ L +M +G
Sbjct: 506 CRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE-----NG 560
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+SP L YNA I C + +V++A +L+ M +GL PD +Y+ +IK + G +A
Sbjct: 561 LSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAR 620
Query: 255 ELKLEMDEKG 264
E+ ++ G
Sbjct: 621 EMFSSIERHG 630
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 123/300 (41%), Gaps = 18/300 (6%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + + LL + + + + + RG P Y L+ A RF E
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L+ M GL V +Y +I C+ ++ A +M +GI P+ T+ +
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
+G + K + ++L G P ++ ++N C E A D EM L GI
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEM-----LEWGIE 527
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P+ + YN I CC G + ++ + M + GLSPD+ +Y I+ FCK+ + KA EL
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
M G+ D TYSTLI G +A + S + + + D
Sbjct: 588 LKTMLRIGLK-------------PDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V K H +L+ ++V GF P V T++ +I+ CRA K+A ++M + G+ P+ TY
Sbjct: 476 VKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNI 535
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI C TG ++ ++ AKM G+ PD Y I + C+ ++ KA +L MLR G
Sbjct: 536 LIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIG 595
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
+ P + Y+ L+ G S+A ++ + G +PD + LV
Sbjct: 596 LKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 177/457 (38%), Gaps = 70/457 (15%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ P R + + +L+ +D A+ + M G P TYN LIHG C+ EA+
Sbjct: 176 MKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAI 235
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+++ M + G P+V TY LI GF G++ +A + M + + P+ T + +
Sbjct: 236 RLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGI 295
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK--------GEFSKALD----LP 182
R KAF++ + + + + + Y ++ YC G+F + + +P
Sbjct: 296 FRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVL--YCLSNNSMAKETGQFLRKIGERGYIP 353
Query: 183 DE--------------------MINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGIL 222
D I GF+ G+ P Y + R E L
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYL 413
Query: 223 RGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDE 282
+ M GL V SY VI CK A EM ++GI +
Sbjct: 414 KQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGIS-------------PNL 460
Query: 283 VTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEA---KRS 339
VT++T ++ + +G++ + + ++ + + D + S+ IN L + +A +
Sbjct: 461 VTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKE 520
Query: 340 LVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGN 399
++ W + P TY+ LI +C + G ++ K KM
Sbjct: 521 MLEWGIE-----PNEITYNILIRSCCST---------------GDTDRSVKLFAKMKENG 560
Query: 400 YKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
P+ YN I C+ V KA ++ K + G++
Sbjct: 561 LSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLK 597
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 67/144 (46%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD ++ L ++ A + K M+ G P+ TYN LI C +V +
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
M + GLSPD+ Y I FC+ K+ KA E+ M+ G+ PD TY LI L
Sbjct: 553 FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 137 KGRLSKAFDLFLEMLREGVSPHKY 160
GR S+A ++F + R G P Y
Sbjct: 613 SGRESEAREMFSSIERHGCVPDSY 636
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 157/417 (37%), Gaps = 80/417 (19%)
Query: 60 LIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG 119
LI + R K + ++ G+ P Y +I ++ L A+ +M G
Sbjct: 151 LIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDG 210
Query: 120 ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKAL 179
PD TY ILI +C+KG + +A L +M +EG P+ + YT L++
Sbjct: 211 CKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILID------------ 258
Query: 180 DLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTN 239
GFL + GRV+EAL L M L+P+ +
Sbjct: 259 ---------GFL-------------------IAGRVDEALKQLEMMRVRKLNPNEATIRT 290
Query: 240 VIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT---YSTLINDFHAQG 296
+ G + P KAFE+ + EK L Y ++L LS+ + +G
Sbjct: 291 FVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERG 350
Query: 297 NLMDAYCLESEMS---------EYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQD 347
+ D+ + MS E + D +S G N ++A + R+ D
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 348 -----------CLSIPAYRTY-DTL-----IENCS-----------NNEFKTVVGLVKDF 379
S+ +Y D L IEN + + T + +
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 380 SMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
S+RG K +K+L +KP+ ++L+I CR + A+D +KE + G+E
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++P+E + S + D++ + M G SP + YN I +C+ + K+A
Sbjct: 526 IEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L+ M + GL PD TY LI ++G+ +A EM + + G +PD+ T ++
Sbjct: 586 ELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELD 645
Query: 135 CRKGRLSK 142
RK LS+
Sbjct: 646 LRKSGLSR 653
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 180/417 (43%), Gaps = 45/417 (10%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
++ L++ VD A + + M P + TYN +I GYC+A + ++A+ LRDM RG
Sbjct: 229 MNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGH 288
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
D TY +I G + +M KGI + ++I LC++G+L++ +
Sbjct: 289 EADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYT 348
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
+F M+R+G P+ IYT L++ Y G A+ L MI++GF PD +V Y+
Sbjct: 349 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD-----VVTYSVV 403
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
++G C GRVEEAL GL+ + + Y+++I G K G +A L EM EKG
Sbjct: 404 VNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 266 PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVIS-SVRI 324
D Y+ LI+ F + +A L M E V + ++ +
Sbjct: 464 T-------------RDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 510
Query: 325 NGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGL 384
+G+ K+ E A + +D +I+ L + G
Sbjct: 511 SGMFKEHRNEE-----------------ALKLWDMMIDKGITPTAACFRALSTGLCLSGK 553
Query: 385 AHKAAKAHDKMLHGNYKPEGAIYNL----LIFDHCRHGNVHKAYDMYKETVHSGVEI 437
+A K D++ P G I + +I C+ G + +A + G E+
Sbjct: 554 VARACKILDEL-----APMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREV 605
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 166/414 (40%), Gaps = 45/414 (10%)
Query: 23 LSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
L V LL V++ K + G P++ TYN L++G A A + M
Sbjct: 200 LGMVEELLWVWRKMKEN---------GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
+ PD+ TY +I G+C+ G+ KA E M +G D TY +I
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIY 202
L+ EM +G+ + ++ ++ C +G+ ++ + + MI K G P++ IY
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK-----GSKPNVAIY 365
Query: 203 NARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
I G G VE+A+ +L M D G PDVV+Y+ V+ G CK G +A +
Sbjct: 366 TVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY------ 419
Query: 263 KGIPLYEDIYQSLLDDLS-DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISS 321
+ D L+ + + YS+LI+ G + +A L EMSE D +
Sbjct: 420 --------FHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471
Query: 322 VRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSM 381
I+ K EA R ++ Y TY L+ G+ K+
Sbjct: 472 ALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVY-TYTILLS-----------GMFKEHR- 518
Query: 382 RGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+A K D M+ P A + L C G V +A + E GV
Sbjct: 519 ---NEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGV 569
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 30/245 (12%)
Query: 193 DGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVK 252
+GI P+L YN ++G V+ A + M + PD+V+Y +IKG+CK G+ K
Sbjct: 216 NGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQK 275
Query: 253 AFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYS 312
A E +M+ +G +E +D++TY T+I +A + L EM E
Sbjct: 276 AMEKLRDMETRG---HE----------ADKITYMTMIQACYADSDFGSCVALYQEMDEKG 322
Query: 313 YLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTV 372
S+ I GL K+ E Y ++ +I S
Sbjct: 323 IQVPPHAFSLVIGGLCKEGKLNE-----------------GYTVFENMIRKGSKPNVAIY 365
Query: 373 VGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVH 432
L+ ++ G A + +M+ +KP+ Y++++ C++G V +A D +
Sbjct: 366 TVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRF 425
Query: 433 SGVEI 437
G+ I
Sbjct: 426 DGLAI 430
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 106/259 (40%), Gaps = 42/259 (16%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
V+ A +L MI GF P V TY+ +++G C+ R +EA+ GL+ + Y
Sbjct: 377 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYS 436
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDAD---------------------------- 125
LI G + G++ +A + +M KG D+
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Query: 126 --------TYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSK 177
TY IL+ + ++ R +A L+ M+ +G++P + L C G+ ++
Sbjct: 497 EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVAR 556
Query: 178 ALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSY 237
A + DE+ G + D + I+ C GR++EA + G+ + G
Sbjct: 557 ACKILDELAPMGVILDAACEDM------INTLCKAGRIKEACKLADGITERGREVPGRIR 610
Query: 238 TNVIKGFCKIGEPVKAFEL 256
T +I K+G+ A +L
Sbjct: 611 TVMINALRKVGKADLAMKL 629
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 130/324 (40%), Gaps = 50/324 (15%)
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
LI + + G + + ++ +M G+ P Y Y LMN F + + E++ G
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGL-VSAMFVDSAERVFEVMESG 251
Query: 190 FLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
I P +V YN I G C G+ ++A+ LR M G D ++Y +I+ +
Sbjct: 252 ----RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD 307
Query: 250 PVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDE----------------------VTYST 287
L EMDEKGI + + ++ L E Y+
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 288 LINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQ- 346
LI+ + G++ DA L M + + D V SV +NGL K EA + +F+
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA----LDYFHTC 423
Query: 347 --DCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEG 404
D L+I + Y +LI+ GL K G +A + ++M +
Sbjct: 424 RFDGLAINSM-FYSSLID-----------GLGK----AGRVDEAERLFEEMSEKGCTRDS 467
Query: 405 AIYNLLIFDHCRHGNVHKAYDMYK 428
YN LI +H V +A ++K
Sbjct: 468 YCYNALIDAFTKHRKVDEAIALFK 491
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 34 QVDKAHNMLKYMIVR-GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTY 92
+VD+A + K M G +V TY L+ G + R +EA+ + M +G++P +
Sbjct: 482 KVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACF 541
Query: 93 YPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLR 152
L G C +GK+ +A ++ ++ G++ DA +I TLC+ GR+ +A L +
Sbjct: 542 RALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITE 600
Query: 153 EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGC 209
G I T ++N G+ A+ L I G+ G V + + C
Sbjct: 601 RGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLETC 657
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 145/294 (49%), Gaps = 18/294 (6%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+DKA + M P V T+N LI+GYCR+ +F A+ + R+M ++G P+V ++
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI GF +GK+ + +M +M+ G T IL+ LCR+GR+ A L L++L +
Sbjct: 269 LIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKR 328
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
V P ++ Y L+ C + + +A+++ +E+ K G +P + + G GR
Sbjct: 329 VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKK-----GQTPCFIACTTLVEGLRKSGR 383
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
E+A G + M + G+ PD V++ +++ C A L+L KG YE
Sbjct: 384 TEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG---YE----- 435
Query: 275 LLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLN 328
DE TY L++ F +G + L +EM + L D + ++GL+
Sbjct: 436 -----PDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLS 484
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 5/234 (2%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+P+ + + + L+ ++++ M MI G S AT L+ G CR R +A G
Sbjct: 260 EPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACG 319
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
++ D+ + + P Y L+ C K +A EM ++ KG P L+ L
Sbjct: 320 LVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLR 379
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
+ GR KA +M+ G+ P + L+ C + A L +KG+ PD
Sbjct: 380 KSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDET 439
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
+ Y+ + G GR +E ++ M D + PD+ +Y ++ G G+
Sbjct: 440 T-----YHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 118/286 (41%), Gaps = 44/286 (15%)
Query: 135 CRKGRLSKAFDLFLEMLR--EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLP 192
CR ++ A F M R +G P+ +Y ++N Y G+ KAL M + P
Sbjct: 168 CRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKP 226
Query: 193 DGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVK 252
D + +N I+G C + + AL + R M + G P+VVS+ +I+GF G+ +
Sbjct: 227 D-----VCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEE 281
Query: 253 AFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQG---NLMDAYCLESEMS 309
++ EM E G E + L+D L E ++D A G +L++ L SE
Sbjct: 282 GVKMAYEMIELGCRFSEATCEILVDGLCRE----GRVDD--ACGLVLDLLNKRVLPSEF- 334
Query: 310 EYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEF 369
+Y L + ++ G NK +E L + C F
Sbjct: 335 DYGSLVE------KLCGENKAVRAMEMMEELWKKGQTPC--------------------F 368
Query: 370 KTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHC 415
LV+ G KA+ +KM++ P+ +NLL+ D C
Sbjct: 369 IACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLC 414
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 10 NKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADR 69
NK V+ P E + S V L + +A M++ + +G +P L+ G ++ R
Sbjct: 326 NKRVL--PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGR 383
Query: 70 FKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGI 129
++A G + M G+ PD T+ L+ C + A ++ KG PD TY +
Sbjct: 384 TEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHV 443
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSK 177
L+ ++GR + L EML + + P + Y RLM+ G+FS+
Sbjct: 444 LVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 187/386 (48%), Gaps = 36/386 (9%)
Query: 14 ILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEA 73
+L P+ + V +L + +VD+ ++++ + GF Y+ IHGY + +A
Sbjct: 202 VLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDA 261
Query: 74 VGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
+ R+M ++G++ DV +Y LI G + G + +A + KM+ +G+ P+ TY +I
Sbjct: 262 LMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRG 321
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
LC+ G+L +AF LF +L G+ +++Y L++ C KG ++A + +M +
Sbjct: 322 LCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQR----- 376
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
GI PS++ YN I+G C+ GRV EA + +G+ DV++Y+ ++ + K+
Sbjct: 377 GIQPSILTYNTVINGLCMAGRVSEADEVSKGVV-----GDVITYSTLLDSYIKVQNIDAV 431
Query: 254 FELKLEMDEKGIPL--------------------YEDIYQSL--LDDLSDEVTYSTLIND 291
E++ E IP+ + +Y+++ +D D TY+T+I
Sbjct: 432 LEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKG 491
Query: 292 FHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVR-WFYQDCLS 350
+ G + +A + +E+ + S ++ V + I+ L KK A L+ W L
Sbjct: 492 YCKTGQIEEALEMFNELRK-SSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550
Query: 351 IPAYRTYDTLIENCSNNEFKTVVGLV 376
I RT I +N K ++GLV
Sbjct: 551 IHTSRTLLHSIH--ANGGDKGILGLV 574
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 199/495 (40%), Gaps = 98/495 (19%)
Query: 12 AVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFK 71
+V ++ DE ++ + + +++A +ML M RG PS+ TYN +I+G C A R
Sbjct: 340 SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS 399
Query: 72 EAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGI----------- 120
EA D +G+ DV TY L+ + + + E++ + + I
Sbjct: 400 EA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILL 454
Query: 121 ------------------------LPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
PD TY +I C+ G++ +A ++F E+ + VS
Sbjct: 455 KAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVS 514
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR--IHGCCVLGR 214
Y R+++ C KG A ++ E+ KG D I+ +R +H G
Sbjct: 515 A-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLD-------IHTSRTLLHSIHANGG 566
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLY--EDIY 272
+ LG++ G+ + + + I CK G A E+ + M KG+ + I
Sbjct: 567 DKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTIL 626
Query: 273 QSLLDDLS-------------------DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
++L+D+L D + Y+ +IN +G L+ A L S
Sbjct: 627 KTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGV 686
Query: 314 LTDDVISSVRINGLNKKATTIEAKRSLVRWF--YQDCLSIPAYRTYDTLIENCSNNEFKT 371
+ + + INGL ++ +EA +R F ++ +P+ TY LI+N
Sbjct: 687 TLNTITYNSLINGLCQQGCLVEA----LRLFDSLENIGLVPSEVTYGILIDN-------- 734
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETV 431
L K+ GL A K D M+ P IYN ++ +C+ G A + +
Sbjct: 735 ---LCKE----GLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKM 787
Query: 432 HSGVEIGRAEP-SFT 445
+GR P +FT
Sbjct: 788 -----MGRVTPDAFT 797
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 17/278 (6%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
S V Y +I+G C+ +A+ + RG++ + TY LI G CQ G L +A
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALR 711
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
+ + + G++P TYGILI LC++G A L M+ +G+ P+ IY +++ YC
Sbjct: 712 LFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC 771
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
G+ A+ + + PD + S + I G C G +EEAL + D +
Sbjct: 772 KLGQTEDAMRVVSRKMMGRVTPDAFTVS-----SMIKGYCKKGDMEEALSVFTEFKDKNI 826
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIN 290
S D + +IKGFC G +A L EM L + L++ + E+ S I
Sbjct: 827 SADFFGFLFLIKGFCTKGRMEEARGLLREM------LVSESVVKLINRVDAELAESESIR 880
Query: 291 DFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLN 328
F + C + + + + D++ S++ +G N
Sbjct: 881 GFLVE------LCEQGRVPQAIKILDEISSTIYPSGKN 912
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 27/303 (8%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
KA N+ + RG + + TYN LI+G C+ EA+ + + GL P TY LI
Sbjct: 673 KALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILI 732
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
C+ G A ++ MV KG++P+ Y ++ C+ G+ A + + V+
Sbjct: 733 DNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVT 792
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P + + ++ YC KG+ +AL + E +K IS + I G C GR+E
Sbjct: 793 PDAFTVSSMIKGYCKKGDMEEALSVFTEFKDK-----NISADFFGFLFLIKGFCTKGRME 847
Query: 217 EALGILRGMADMGLSPDVVSYTN----------VIKGF----CKIGEPVKAFELKLEMDE 262
EA G+LR +M +S VV N I+GF C+ G +A ++ E+
Sbjct: 848 EARGLLR---EMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISS 904
Query: 263 KGIPLYEDI--YQSL--LDDLS-DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDD 317
P +++ YQ L L+D++ +E+ ++DFH+ + + + C ++ + +
Sbjct: 905 TIYPSGKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVMS 964
Query: 318 VIS 320
V+S
Sbjct: 965 VLS 967
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 175/442 (39%), Gaps = 78/442 (17%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ S + V +D + + + + N L+ + + EA + R M + L
Sbjct: 419 LDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDL 478
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
+PD TY +I G+C+TG++ +A EM ++ K + A Y +I LC+KG L A +
Sbjct: 479 TPDTATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATE 537
Query: 146 LFLEMLREGVSPHKYIYTRLMN-----------------------------------YYC 170
+ +E+ +G+ + L++ C
Sbjct: 538 VLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLC 597
Query: 171 FKGEFSKALDLPDEMINKGF---LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMAD 227
+G F A+++ M KG P I +LV N R ++ L ++
Sbjct: 598 KRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLV-DNLR--------SLDAYLLVVNAGET 648
Query: 228 MGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYST 287
S DV+ YT +I G CK G VKA L +G+ L + +TY++
Sbjct: 649 TLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTL-------------NTITYNS 695
Query: 288 LINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQD 347
LIN QG L++A L + + +V + I+ L K+ ++A++ L +
Sbjct: 696 LINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKG 755
Query: 348 CLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIY 407
+P Y+++++ + G A + + + G P+
Sbjct: 756 L--VPNIIIYNSIVDG---------------YCKLGQTEDAMRVVSRKMMGRVTPDAFTV 798
Query: 408 NLLIFDHCRHGNVHKAYDMYKE 429
+ +I +C+ G++ +A ++ E
Sbjct: 799 SSMIKGYCKKGDMEEALSVFTE 820
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 167/403 (41%), Gaps = 45/403 (11%)
Query: 42 LKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQ 101
L+ ++ GFSP++ + + + R +F + + + ++ + Y + F
Sbjct: 14 LQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLN 73
Query: 102 TGKLGKAFEM------KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE-G 154
+ A + KA + + + D+ +G I + SK + + LR G
Sbjct: 74 LNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSI----TRDDPSKGLLILRDCLRNHG 129
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
P + L+ + KGE A+++ + M NK + +A I G C +G+
Sbjct: 130 AFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNV---NYPFDNFVCSAVISGFCKIGK 186
Query: 215 VEEALGILRGMADMG-LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
E ALG D G L P++V+YT ++ C++G+ + +L ++++G
Sbjct: 187 PELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEF------ 240
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
D V YS I+ + G L+DA + EM E D V S+ I+GL+K+
Sbjct: 241 -------DCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNV 293
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHD 393
EA L + + P TY +I GL K G +A +
Sbjct: 294 EEALGLLGKMIKEGVE--PNLITYTAIIR-----------GLCK----MGKLEEAFVLFN 336
Query: 394 KMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
++L + + +Y LI CR GN+++A+ M + G++
Sbjct: 337 RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/536 (21%), Positives = 223/536 (41%), Gaps = 119/536 (22%)
Query: 30 LNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDV 89
L+V Q++ A +L ++ G +P+V T+ LI+G+C+ A + + M +RG+ PD+
Sbjct: 262 LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 90 DTYYPLICGFCQTGKLGKAFEMKAKMVHK------------------------------- 118
Y LI G+ + G LG ++ ++ +HK
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 119 ----GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
GI P+ TY ILI LC+ GR+ +AF ++ ++L+ G+ P Y+ L++ +C G
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 175 FSKALDLPDEMINKGFLPD------------------------------GISPSLVIYNA 204
L ++MI G+ PD I ++V++N+
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 205 RIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIK------GFCKIGEPVKAFEL-- 256
I G C L R +EAL + R M G+ PDV ++T V++ FCK +P +L
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFD 561
Query: 257 -----KLEMD-----------------EKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHA 294
K+ D E + ++ + ++ D VTY+T+I + +
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME--PDIVTYNTMICGYCS 619
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNK--------KATTIEAKRS------- 339
L +A + + + + V ++ I+ L K + +I A++
Sbjct: 620 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 679
Query: 340 ---LVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKML 396
L+ WF + +++ ++ + E + + ++ RG +A + +
Sbjct: 680 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Query: 397 HGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE----IGRAEPSFTWPR 448
P+ Y +LI +C+ G + +A +Y+ + +GV+ + RA + P+
Sbjct: 740 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPK 795
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 190/424 (44%), Gaps = 46/424 (10%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+V KA + + ++ RGF + + N+++ G D+ + A +L + G +P+V T+
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFC 290
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI GFC+ G++ +AF++ M +GI PD Y LI + G L LF + L +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
GV +++ ++ Y G+ + A ++ K L GISP++V Y I G C G
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATA-----SVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
R+ EA G+ + G+ P +V+Y+++I GFCK G F L +M + G P
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP------- 458
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRING---LNKK 330
D V Y L++ QG ++ A +M S + V+ + I+G LN+
Sbjct: 459 ------PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 331 ATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGL-VKDFSMRG------ 383
++ R + + + ++ +++E+ K +GL + D R
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 384 -----------LAHK---AAKAHDKMLHGNYKPEGAIYNLLIFDHC---RHGNVHKAYDM 426
H+ A+K + ++ G +P+ YN +I +C R + +++
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Query: 427 YKET 430
K T
Sbjct: 633 LKVT 636
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 110/245 (44%), Gaps = 17/245 (6%)
Query: 1 MMITASCKNNKAVI----LDPDERNLLSQ--------VHSLLNVYQVDKAHNMLKYMIVR 48
+M A CK+ K I D +RN +S +H L ++++ A +I
Sbjct: 542 IMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 601
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
P + TYN +I GYC R EA I + P+ T LI C+ + A
Sbjct: 602 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 661
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
M + M KG P+A TYG L+ + + +F LF EM +G+SP Y+ +++
Sbjct: 662 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 721
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
C +G +A ++ + I+ LPD +V Y I G C +GR+ EA + M
Sbjct: 722 LCKRGRVDEATNIFHQAIDAKLLPD-----VVAYAILIRGYCKVGRLVEAALLYEHMLRN 776
Query: 229 GLSPD 233
G+ PD
Sbjct: 777 GVKPD 781
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
K P+ L +H L +D A M M +G P+ TY L+ + ++
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
+ + + +M ++G+SP + +Y +I G C+ G++ +A + + + +LPD Y IL
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 753
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDE 184
I C+ GRL +A L+ MLR GV P + L Y K SK + + D+
Sbjct: 754 IRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVHDK 807
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 166/408 (40%), Gaps = 90/408 (22%)
Query: 36 DKAHNMLKYMIVRG--FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
D + + ++++R F + ++E+I R F +G +RD R L DV +
Sbjct: 99 DPSFYTIAHVLIRNGMFDVADKVFDEMITN--RGKDF-NVLGSIRD---RSLDADVCKFL 152
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
C C+ G + KA E+ G++ D+ ++ +L R+ D F ++ R
Sbjct: 153 MECC--CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRG 210
Query: 154 GVSP-----HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHG 208
G+ P H ++ L +C KGE +KALD ++ +GF +V N + G
Sbjct: 211 GIEPSGVSAHGFVLDAL---FC-KGEVTKALDFHRLVMERGF-----RVGIVSCNKVLKG 261
Query: 209 CCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLY 268
V ++E A +L + D G +P+VV++ +I GFCK GE +AF+L M+++GI
Sbjct: 262 LSV-DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE-- 318
Query: 269 EDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLN 328
D + YSTLI+ + G L + L S+ D V+ S
Sbjct: 319 -----------PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS------- 360
Query: 329 KKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKA 388
T D +++ G A
Sbjct: 361 --------------------------STIDVYVKS-------------------GDLATA 375
Query: 389 AKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
+ + +ML P Y +LI C+ G +++A+ MY + + G+E
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 133/262 (50%), Gaps = 5/262 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD + + N+ + DKA ++ G PS+ T LI R +A
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ R+M GL DV TY L+ G+ +T +L K FE+ +M GI PD TY ILI ++
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+G + +A ++ E++R G P +T ++ + +G+F +A L M + PD
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
++ S A +HG C R+E+A+ + + D GL PDVV Y +I G+C +G+ KA
Sbjct: 584 VTCS-----ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 255 ELKLEMDEKGIPLYEDIYQSLL 276
EL M ++G+ E + +L+
Sbjct: 639 ELIGLMVQRGMLPNESTHHALV 660
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 179/451 (39%), Gaps = 67/451 (14%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P +S + +L V+ ++ A +++M+ RG + A + I YC F + +
Sbjct: 234 PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWEL 293
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA----FEMK-------------------- 112
L M G+ PD+ + I C+ G L +A F++K
Sbjct: 294 LMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK 353
Query: 113 -------AKMVHKGIL-PDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
K++H L P+ Y + +C G + +A +F E+ G+ P YT
Sbjct: 354 VGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
+++ YC G KA + L G PSL I C G + +A + R
Sbjct: 414 MIDGYCNLGRTDKAFQYFGAL-----LKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT 284
M GL DVV+Y N++ G+ K + K FEL EM GI D T
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS-------------PDVAT 515
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWF 344
Y+ LI+ +G + +A + SE+ ++ + + I G +K+ EA + WF
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA---FILWF 572
Query: 345 YQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEG 404
Y L + + T L+ + KA +K+L KP+
Sbjct: 573 YMADLRMKP--------------DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 405 AIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+YN LI +C G++ KA ++ V G+
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 141/321 (43%), Gaps = 31/321 (9%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+V K +K + P++ Y+ + C A I +++ + GL PD Y
Sbjct: 353 KVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYT 412
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
+I G+C G+ KAF+ ++ G P T ILI R G +S A +F M E
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ Y LM+ Y + +K +L DEM + GISP + YN IH V G
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA-----GISPDVATYNILIHSMVVRG 527
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF-------ELKLEMD----- 261
++EA I+ + G P +++T+VI GF K G+ +AF +L+++ D
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCS 587
Query: 262 ------------EKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMS 309
EK I L+ + + L D V Y+TLI+ + + G++ A L M
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLK--PDVVLYNTLIHGYCSVGDIEKACELIGLMV 645
Query: 310 EYSYLTDDVISSVRINGLNKK 330
+ L ++ + GL K
Sbjct: 646 QRGMLPNESTHHALVLGLEGK 666
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%)
Query: 8 KNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRA 67
+N K L D + +H +Q++K ++ M G SP VATYN LIH
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 68 DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTY 127
EA I+ ++ +RG P + +I GF + G +AF + M + PD T
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 128 GILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
L+ C+ R+ KA LF ++L G+ P +Y L++ YC G+ KA +L M+
Sbjct: 587 SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQ 646
Query: 188 KGFLPD 193
+G LP+
Sbjct: 647 RGMLPN 652
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 150/367 (40%), Gaps = 44/367 (11%)
Query: 89 VDTYYPLICGFC-QTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLF 147
++T + ++ C + K+ A ++ K+ GI P L+ + R L A +
Sbjct: 200 LETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFV 259
Query: 148 LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIH 207
ML G + + + + YC G F K +L G GI P +V + I
Sbjct: 260 EHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELL-----MGMKHYGIRPDIVAFTVFID 314
Query: 208 GCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPL 267
C G ++EA +L + G+S D VS ++VI GFCK+G+P +A +L L
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI-----HSFRL 369
Query: 268 YEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGL 327
+I+ YS+ +++ + G+++ A + E+ E L D V + I+G
Sbjct: 370 RPNIF-----------VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 328 NKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSN----NEFKTVVGLVKDFSMR- 382
T +A + + P+ T LI CS ++ ++V +K ++
Sbjct: 419 CNLGRTDKAFQYFGALLKSG--NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 383 ------GLAHKAAKAH---------DKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMY 427
L H K H D+M P+ A YN+LI G + +A ++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 428 KETVHSG 434
E + G
Sbjct: 537 SELIRRG 543
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD + +H +++KA + ++ G P V YN LIHGYC ++A
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGIL 121
++ M +RG+ P+ T++ L+ G GK E A M+ + I+
Sbjct: 639 ELIGLMVQRGMLPNESTHHALVLGL--EGKRFVNSETHASMLLEEII 683
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 133/262 (50%), Gaps = 5/262 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD + + N+ + DKA ++ G PS+ T LI R +A
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ R+M GL DV TY L+ G+ +T +L K FE+ +M GI PD TY ILI ++
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+G + +A ++ E++R G P +T ++ + +G+F +A L M + PD
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
++ S A +HG C R+E+A+ + + D GL PDVV Y +I G+C +G+ KA
Sbjct: 584 VTCS-----ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 255 ELKLEMDEKGIPLYEDIYQSLL 276
EL M ++G+ E + +L+
Sbjct: 639 ELIGLMVQRGMLPNESTHHALV 660
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 179/451 (39%), Gaps = 67/451 (14%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P +S + +L V+ ++ A +++M+ RG + A + I YC F + +
Sbjct: 234 PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWEL 293
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA----FEMK-------------------- 112
L M G+ PD+ + I C+ G L +A F++K
Sbjct: 294 LMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK 353
Query: 113 -------AKMVHKGIL-PDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
K++H L P+ Y + +C G + +A +F E+ G+ P YT
Sbjct: 354 VGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
+++ YC G KA + L G PSL I C G + +A + R
Sbjct: 414 MIDGYCNLGRTDKAFQYFGAL-----LKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT 284
M GL DVV+Y N++ G+ K + K FEL EM GI D T
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS-------------PDVAT 515
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWF 344
Y+ LI+ +G + +A + SE+ ++ + + I G +K+ EA + WF
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA---FILWF 572
Query: 345 YQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEG 404
Y L + + T L+ + KA +K+L KP+
Sbjct: 573 YMADLRMKP--------------DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 405 AIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+YN LI +C G++ KA ++ V G+
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 141/321 (43%), Gaps = 31/321 (9%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+V K +K + P++ Y+ + C A I +++ + GL PD Y
Sbjct: 353 KVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYT 412
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
+I G+C G+ KAF+ ++ G P T ILI R G +S A +F M E
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ Y LM+ Y + +K +L DEM + GISP + YN IH V G
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA-----GISPDVATYNILIHSMVVRG 527
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF-------ELKLEMD----- 261
++EA I+ + G P +++T+VI GF K G+ +AF +L+++ D
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCS 587
Query: 262 ------------EKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMS 309
EK I L+ + + L D V Y+TLI+ + + G++ A L M
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLK--PDVVLYNTLIHGYCSVGDIEKACELIGLMV 645
Query: 310 EYSYLTDDVISSVRINGLNKK 330
+ L ++ + GL K
Sbjct: 646 QRGMLPNESTHHALVLGLEGK 666
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%)
Query: 8 KNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRA 67
+N K L D + +H +Q++K ++ M G SP VATYN LIH
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 68 DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTY 127
EA I+ ++ +RG P + +I GF + G +AF + M + PD T
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 128 GILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
L+ C+ R+ KA LF ++L G+ P +Y L++ YC G+ KA +L M+
Sbjct: 587 SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQ 646
Query: 188 KGFLPD 193
+G LP+
Sbjct: 647 RGMLPN 652
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 150/367 (40%), Gaps = 44/367 (11%)
Query: 89 VDTYYPLICGFC-QTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLF 147
++T + ++ C + K+ A ++ K+ GI P L+ + R L A +
Sbjct: 200 LETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFV 259
Query: 148 LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIH 207
ML G + + + + YC G F K +L G GI P +V + I
Sbjct: 260 EHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELL-----MGMKHYGIRPDIVAFTVFID 314
Query: 208 GCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPL 267
C G ++EA +L + G+S D VS ++VI GFCK+G+P +A +L L
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI-----HSFRL 369
Query: 268 YEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGL 327
+I+ YS+ +++ + G+++ A + E+ E L D V + I+G
Sbjct: 370 RPNIF-----------VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 328 NKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSN----NEFKTVVGLVKDFSMR- 382
T +A + + P+ T LI CS ++ ++V +K ++
Sbjct: 419 CNLGRTDKAFQYFGALLKSG--NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 383 ------GLAHKAAKAH---------DKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMY 427
L H K H D+M P+ A YN+LI G + +A ++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 428 KETVHSG 434
E + G
Sbjct: 537 SELIRRG 543
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD + +H +++KA + ++ G P V YN LIHGYC ++A
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGIL 121
++ M +RG+ P+ T++ L+ G GK E A M+ + I+
Sbjct: 639 ELIGLMVQRGMLPNESTHHALVLGL--EGKRFVNSETHASMLLEEII 683
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 180/413 (43%), Gaps = 37/413 (8%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
V L +V+K+ ++K V+G P TYN +I+ Y + F G+L+ M K G+
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
+ TY L+ + GK+ A ++ +M +GI D Y LI CRKG + +AF
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
LF E+ +G+SP Y Y L++ C GE A L +EM +K G++ + V++N
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK-----GVNITQVVFNTL 405
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
I G C G V+EA I M G DV + + F ++ +A + M E G+
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Query: 266 PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRIN 325
L V+Y+ LI+ + +GN+ +A L EMS + + +V I
Sbjct: 466 KL-------------STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIY 512
Query: 326 GLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIE-NCSNNEFKTVVGLVKDFSMRGL 384
K+ EA++ +R + P TY +LI C + + L + ++GL
Sbjct: 513 AYCKQGKIKEARK--LRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Query: 385 AHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
+ Y ++I + G +A+ +Y E G I
Sbjct: 571 DQNS----------------VTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTI 607
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 125/265 (47%), Gaps = 5/265 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L P + + + V ++ A ++ M +G + + +N LI GYCR EA
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEAS 419
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
I M ++G DV T + F + + +A + +M+ G+ +Y LI
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C++G + +A LF+EM +GV P+ Y ++ YC +G+ +A L M G PD
Sbjct: 480 CKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDS 539
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ Y + IHG C+ V+EA+ + M GL + V+YT +I G K G+ +AF
Sbjct: 540 YT-----YTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDL 279
L EM KG + +Y +L+ +
Sbjct: 595 GLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 162/390 (41%), Gaps = 46/390 (11%)
Query: 70 FKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGI 129
F+E + + M K+GLS D + + + ++ E+ +MV G+ + I
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
++ LCR+G + K+ L E +G+ P Y Y ++N Y + +FS E + K
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV-----EGVLKV 284
Query: 190 FLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
DG+ + V Y + G++ +A + M + G+ DV YT++I C+ G
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 250 PVKAFELKLEMDEKGIPLYEDIYQSLLD---DLSDEVTYSTLINDFHAQG---------N 297
+AF L E+ EKG+ Y +L+D + + L+N+ ++G
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 298 LMDAYCLESEMSEYSYLTD---------DVISSVRING-LNKKATTIEAKRSLVRWFYQD 347
L+D YC + + E S + D DV + I N+ EAK+ L R
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 348 C-LSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAI 406
LS +Y L+ + G +A + +M +P
Sbjct: 465 VKLSTVSY------------------TNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT 506
Query: 407 YNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
YN++I+ +C+ G + +A + +G++
Sbjct: 507 YNVMIYAYCKQGKIKEARKLRANMEANGMD 536
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 169/369 (45%), Gaps = 40/369 (10%)
Query: 17 PDERNLLSQVHSL-LNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
PD R S +H +N D+ + MI G SP V N LIH +C+ R A+
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 150
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+LR+ R +S D TY +I G C+ G +A++ ++MV GILPD +Y LI C
Sbjct: 151 LLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFC 207
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
+ G +A L E+ + H + + N + + + +M+ GF PD
Sbjct: 208 KVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYR-------DMVMSGFDPD-- 258
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
+V +++ I+ C G+V E +LR M +M + P+ V+YT ++ K A
Sbjct: 259 ---VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDL----------------------SDEVTYSTLINDFH 293
L +M +GIP+ +Y L+D L + VTY+ L++
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375
Query: 294 AQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPA 353
G+L A + ++M E S + + V S ING KK +E SL+R +D +P
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKG-MLEEAVSLLRKM-EDQNVVPN 433
Query: 354 YRTYDTLIE 362
TY T+I+
Sbjct: 434 GFTYGTVID 442
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 27/341 (7%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
KA++ + E NL++ L + Y + + M++ GF P V T++ +I+ C+ +
Sbjct: 216 KALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKV 275
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
E +LR+M + + P+ TY L+ + A + ++MV +GI D Y +L
Sbjct: 276 LEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVL 335
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
+ L + G L +A F +L + P+ YT L++ C G+ S A + +M+ K
Sbjct: 336 MDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSV 395
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEP 250
+P+ +V Y++ I+G G +EEA+ +LR M D + P+ +Y VI G K G+
Sbjct: 396 IPN-----VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE 450
Query: 251 VKAFELKLEMDEKGIPLYEDIYQSLLDDLS----------------------DEVTYSTL 288
A EL EM G+ I +L++ L D++ Y++L
Sbjct: 451 EMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSL 510
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNK 329
I+ F G+ A EM E D V +V I+G+ K
Sbjct: 511 IDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLK 551
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 191/470 (40%), Gaps = 73/470 (15%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
+A K ++ P+V TY L+ G C+A A I+ M ++ + P+V TY +I
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
G+ + G L +A + KM + ++P+ TYG +I L + G+ A +L EM GV
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 466
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD----------------------- 193
+ YI L+N+ G + L +M++KG D
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAW 526
Query: 194 -------GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCK 246
G+ +V YN I G G+V A +GM + G+ PD+ ++ ++ K
Sbjct: 527 AEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRK 585
Query: 247 IGEPVKAFELKLEMDEKGI------------------PLYEDIY---QSLLDDLSDEVTY 285
G+ +L +M GI + E I+ Q +L ++ +T
Sbjct: 586 QGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTT 645
Query: 286 STLINDFHAQGNLMDAYCLESEMSEYSY-------LTDDVISSVRINGLNKKATTI---- 334
+ D ++ DA ++ + SY + + +I+++ G+ KKA +
Sbjct: 646 YRIFLDTSSKHKRADA-IFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM 704
Query: 335 EAK---------RSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLA 385
EA+ SL+ ++ A TY ++E + T +++ S GL
Sbjct: 705 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLI 764
Query: 386 HKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+ K +M +P+ YN LI + GN+ + +Y E + G+
Sbjct: 765 KEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGL 814
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 16/237 (6%)
Query: 22 LLSQVHSLLNVYQV-----------DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
+L ++H L Y++ D + ++ G S YN LI C+
Sbjct: 635 MLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMT 694
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
K+A ++ DM RG PD T+ L+ G+ + KA + M+ GI P+ TY +
Sbjct: 695 KKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTI 754
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
I L G + + EM G+ P + Y L++ G ++ + EMI
Sbjct: 755 IRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMI---- 810
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKI 247
DG+ P YN I +G++ +A +L+ M G+SP+ +Y +I G CK+
Sbjct: 811 -ADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 170/440 (38%), Gaps = 94/440 (21%)
Query: 79 DMAKRGLSPD---------VDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGI 129
+ +R PD V ++ L + +L A + M G++PD+ +
Sbjct: 39 SITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNS 98
Query: 130 LILTLCRKGRLSKAFDL-FLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINK 188
LI G + L + +M+ GVSP + L++ +C G S A+ L +
Sbjct: 99 LIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV-- 156
Query: 189 GFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
IS V YN I G C G +EA L M MG+ PD VSY +I GFCK+G
Sbjct: 157 ------ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG 210
Query: 249 EPVKAFELKLEMDEKGI-----------------PLYEDIYQSLLDDLSDEVTYSTLIND 291
V+A L E+ E + Y D+ S D D VT+S++IN
Sbjct: 211 NFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFD--PDVVTFSSIINR 268
Query: 292 FHAQGNLMDAYCLESEMSE---------YSYLTDD------------------------- 317
G +++ L EM E Y+ L D
Sbjct: 269 LCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD 328
Query: 318 -VISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIE------NCSNNEF- 369
V+ +V ++GL K EA+++ + +D +P TY L++ + S+ EF
Sbjct: 329 LVVYTVLMDGLFKAGDLREAEKTF-KMLLEDN-QVPNVVTYTALVDGLCKAGDLSSAEFI 386
Query: 370 ------KTVV-------GLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCR 416
K+V+ ++ + +G+ +A KM N P G Y +I +
Sbjct: 387 ITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFK 446
Query: 417 HGNVHKAYDMYKETVHSGVE 436
G A ++ KE GVE
Sbjct: 447 AGKEEMAIELSKEMRLIGVE 466
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 148/347 (42%), Gaps = 38/347 (10%)
Query: 43 KYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQT 102
K M +G P +AT+N +++ + + + + M G+ P + + ++ C+
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN 621
Query: 103 GKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIY 162
GK+ +A + +M+ I P+ TY I + T + R F +L G+ + +Y
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 163 TRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGIL 222
L+ C G KA + +M +GF+PD ++ +N+ +HG V V +AL
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT-----FNSLMHGYFVGSHVRKALSTY 736
Query: 223 RGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL------ 276
M + G+SP+V +Y +I+G G + + EM +G+ + Y +L+
Sbjct: 737 SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 796
Query: 277 ---------------DDLSDEV-TYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVIS 320
D L + TY+ LI++F G ++ A L EM + +
Sbjct: 797 GNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTY 856
Query: 321 SVRINGL-----------NKKATTIEAKRSLVRWFYQDCLSIPAYRT 356
I+GL NKKA + + L++ ++ IP +T
Sbjct: 857 CTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQT 903
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD S +H V KA + M+ G SP+VATYN +I G A KE
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 770
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L +M RG+ PD TY LI G + G + + + +M+ G++P TY +LI
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
G++ +A +L EM + GVSP+ Y +++ C
Sbjct: 831 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 6/251 (2%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEA-V 74
DP ++ ++ + L+ Q++ A K M G P+VA+ N LI CR D +A +
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
I +M KRG PD TY LI G C+ G++ +A ++ +MV K P TY LI L
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C + +A EM +G+ P+ + Y+ LM+ C G +A++L + M+ + G
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR-----G 292
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
P++V Y I G C +++EA+ +L M GL PD Y VI GFC I + +A
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA 352
Query: 255 ELKLEMDEKGI 265
EM GI
Sbjct: 353 NFLDEMILGGI 363
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 131/277 (47%), Gaps = 14/277 (5%)
Query: 8 KNNKAVILDPDERNLLSQVHSLL-NVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCR 66
KN + + L P +L + +L N VD + M RG P TY LI G CR
Sbjct: 145 KNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCR 204
Query: 67 ADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADT 126
R EA + +M ++ +P V TY LI G C + + +A +M KGI P+ T
Sbjct: 205 FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFT 264
Query: 127 YGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMI 186
Y L+ LC+ GR +A +LF M+ G P+ YT L+ C + + +A++L D M
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Query: 187 NKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSY-------TN 239
+G PD +Y I G C + + EA L M G++P+ +++
Sbjct: 325 LQGLKPDA-----GLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNE 379
Query: 240 VIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
V++G C P +AF L L M +GI + + +SL+
Sbjct: 380 VVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLV 415
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 132/254 (51%), Gaps = 4/254 (1%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
DPD + + L ++D+A + M+ + +P+V TY LI+G C + EA+
Sbjct: 189 DPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR 248
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
L +M +G+ P+V TY L+ G C+ G+ +A E+ M+ +G P+ TY LI LC
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 308
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
++ ++ +A +L M +G+ P +Y ++++ +C +F +A + DEMI G P+ +
Sbjct: 309 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRL 368
Query: 196 SPSLVI--YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
+ ++ + N + G C A + M G+S +V + +++K CK GE KA
Sbjct: 369 TWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKA 427
Query: 254 FELKLEMDEKG-IP 266
+L E+ G IP
Sbjct: 428 VQLVDEIVTDGCIP 441
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 175/413 (42%), Gaps = 31/413 (7%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D+ + V L++ + A +++ M + S + GY R R +++ +
Sbjct: 50 DQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
M P Y ++ + +L AF+ M G+ P + +LI LCR
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169
Query: 138 -GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G + +FLEM + G P Y Y L++ C G +A L EM+ K +
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK-----DCA 224
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P++V Y + I+G C V+EA+ L M G+ P+V +Y++++ G CK G ++A EL
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 257 KLEMDEKGIPLYEDIYQSLLD------------DLSDEVTYSTLINDFHAQGNLMDAYCL 304
M +G Y +L+ +L D + L D G ++ +C
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 305 ESEMSEYSYLTDDVISSVRINGL--NKKATTIEAKRS--LVRWFYQDCLSIP--AYRTYD 358
S+ E + D++I + G+ N+ I K S +VR C + P A+ Y
Sbjct: 345 ISKFREAANFLDEMI----LGGITPNRLTWNIHVKTSNEVVRGL---CANYPSRAFTLYL 397
Query: 359 TLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLI 411
++ + E +T+ LVK +G KA + D+++ P + LLI
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 41/185 (22%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
+A + + M+ RG P++ TY LI G C+ + +EAV +L M +GL PD Y +I
Sbjct: 280 QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGI--------------------------- 129
GFC K +A +M+ GI P+ T+ I
Sbjct: 340 SGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSM 399
Query: 130 --------------LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
L+ LC+KG KA L E++ +G P K + L+ + K
Sbjct: 400 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIV 459
Query: 176 SKALD 180
+A D
Sbjct: 460 GEASD 464
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 123/323 (38%), Gaps = 46/323 (14%)
Query: 130 LILTLCRK-GRLSKAFD---LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEM 185
++L++CR GR+ + FD +F +M P + Y ++ + + + A
Sbjct: 88 ILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKF---- 143
Query: 186 INKGFLPDGISPSLVIYNARIHGCCVL-GRVEEALGILRGMADMGLSPDVVSYTNVIKGF 244
K G+ P++ N I C G V+ L I M G PD +Y +I G
Sbjct: 144 -YKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGL 202
Query: 245 CKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCL 304
C+ G +A +L EM EK D VTY++LIN N+ +A
Sbjct: 203 CRFGRIDEAKKLFTEMVEK-------------DCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 305 ESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN- 363
EM + S ++GL K +++A + C P TY TLI
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR--PNMVTYTTLITGL 307
Query: 364 CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKA 423
C + + V L+ +++GL KP+ +Y +I C +A
Sbjct: 308 CKEQKIQEAVELLDRMNLQGL----------------KPDAGLYGKVISGFCAISKFREA 351
Query: 424 YDMYKETVHSGVEIGRAEPSFTW 446
+ E + G+ R TW
Sbjct: 352 ANFLDEMILGGITPNR----LTW 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPS-------VATYNELIHGYCRA 67
L PD + + + +A N L MI+ G +P+ V T NE++ G C A
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-A 386
Query: 68 DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTY 127
+ A + M RG+S +V+T L+ C+ G+ KA ++ ++V G +P T+
Sbjct: 387 NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTW 446
Query: 128 GILILTLCRKGRLSKAFDLFLEML 151
+LI K + +A D L L
Sbjct: 447 KLLIGHTLDKTIVGEASDTLLRDL 470
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 177/425 (41%), Gaps = 45/425 (10%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GFS TY+ I G C+ +F +L DM G PD+ + + C+ K+G A
Sbjct: 74 GFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFA 133
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ MV +G PD +Y ILI L R G+++ A +++ M+R GVSP L+
Sbjct: 134 VQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVG 193
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
C ++ +DL EM+ + + S V+YNA I G C GR+E+A + M+ +
Sbjct: 194 LC----HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD----------- 277
G PD+V+Y ++ + +A + EM GI L Y LL
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 278 -----------DLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRING 326
D V+YSTLI F N AY L EM + + + V +
Sbjct: 310 YNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT----- 364
Query: 327 LNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAH 386
SL++ F ++ S A + D + E + + ++ G
Sbjct: 365 ------------SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVD 412
Query: 387 KAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPSFTW 446
KA + M+ P+ YN LI CR G V +A ++++ G E E +F +
Sbjct: 413 KAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM--KGKECCPDELTFKF 470
Query: 447 PRPGL 451
GL
Sbjct: 471 IIGGL 475
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 18/293 (6%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+++KA + YM G P + TYN L++ Y + K A G++ +M + G+ D +Y
Sbjct: 235 RIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYN 294
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ C+ K + K + D +Y LI T CR KA+ LF EM ++
Sbjct: 295 QLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQK 354
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ + YT L+ + +G S A L D+M G PD I Y + C G
Sbjct: 355 GMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI-----FYTTILDHLCKSG 409
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
V++A G+ M + ++PD +SY ++I G C+ G +A I L+ED+
Sbjct: 410 NVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEA-----------IKLFEDMKG 458
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRING 326
+ DE+T+ +I L AY + +M + + D +S I
Sbjct: 459 K--ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 139/323 (43%), Gaps = 21/323 (6%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD + ++ L +V A + MI G SP L+ G C A + A
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 76 ILRDMAKRG-LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
++ + K + Y LI GFC+ G++ KA +K+ M G PD TY +L+
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALD-LPDEMINKGFLPD 193
L +A + EM+R G+ Y Y +L+ +C K + + EM +GF
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-- 323
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
+V Y+ I C +A + M G+ +VV+YT++IK F + G A
Sbjct: 324 ----DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVA 379
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
+L +M E G+ D + Y+T+++ GN+ AY + ++M E+
Sbjct: 380 KKLLDQMTELGLS-------------PDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426
Query: 314 LTDDVISSVRINGLNKKATTIEA 336
D + + I+GL + EA
Sbjct: 427 TPDAISYNSLISGLCRSGRVTEA 449
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 151/418 (36%), Gaps = 81/418 (19%)
Query: 91 TYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM 150
Y I ++G + A ++ +M H + Y I L R+ R A ++ +M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 151 LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCC 210
G S + Y+R ++ C +F L +M GF+PD + +N + C
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPD-----IWAFNVYLDLLC 125
Query: 211 VLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI----- 265
+V A+ M G PDVVSYT +I G + G+ A E+ M G+
Sbjct: 126 RENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNK 185
Query: 266 ---PLYEDIYQSLLDDLSDE---------------VTYSTLINDFHAQGNLMDAYCLESE 307
L + + DL+ E V Y+ LI+ F G + A L+S
Sbjct: 186 ACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSY 245
Query: 308 MSEYSYLTDDVISSVRI-----NGLNKKATTIEAK------------------------- 337
MS+ D V +V + N + K+A + A+
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 338 -----------------------RSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVG 374
+L+ F + + AYR ++ + + T
Sbjct: 306 PDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 375 LVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVH 432
L+K F G + A K D+M P+ Y ++ C+ GNV KAY ++ + +
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A +L M G SP Y ++ C++ +A G+ DM + ++PD +Y LI
Sbjct: 379 AKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLIS 438
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
G C++G++ +A ++ M K PD T+ +I L R +LS A+ ++ +M+ +G +
Sbjct: 439 GLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTL 498
Query: 158 HKYIYTRLMNYYC 170
+ + L+ C
Sbjct: 499 DRDVSDTLIKASC 511
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD + + L VDKA+ + MI +P +YN LI G CR+ R EA+
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAI 450
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ DM + PD T+ +I G + KL A+++ +M+ KG D D LI
Sbjct: 451 KLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKAS 510
Query: 135 C 135
C
Sbjct: 511 C 511
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 162/350 (46%), Gaps = 23/350 (6%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A + L M+ GF PS+ T+ L++G+C +RF EA+ ++ + G P+V Y +I
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID 192
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
C+ G++ A ++ M GI PD TY LI L G + + +M+R G+SP
Sbjct: 193 SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISP 252
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
++ L++ Y +G+ +A +EMI + ++P++V YN+ I+G C+ G ++E
Sbjct: 253 DVITFSALIDVYGKEGQLLEAKKQYNEMIQR-----SVNPNIVTYNSLINGLCIHGLLDE 307
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
A +L + G P+ V+Y +I G+CK ++ M G+
Sbjct: 308 AKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD----------- 356
Query: 278 DLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAK 337
D TY+TL + G A + M D ++ ++GL +
Sbjct: 357 --GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHG---KIG 411
Query: 338 RSLVRWF-YQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLA 385
++LVR Q ++ TY+ +I+ C ++ + L +++G++
Sbjct: 412 KALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVS 461
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 134/267 (50%), Gaps = 5/267 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+P S V+ +V + +A +++ ++ G+ P+V YN +I C + A+
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L+ M K G+ PDV TY LI +G G + + + M+ GI PD T+ LI
Sbjct: 205 DVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY 264
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
++G+L +A + EM++ V+P+ Y L+N C G +A + + +++KGF P+
Sbjct: 265 GKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNA 324
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
++ YN I+G C RV++ + IL M+ G+ D +Y + +G+C+ G+ A
Sbjct: 325 VT-----YNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAE 379
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSD 281
++ M G+ + LLD L D
Sbjct: 380 KVLGRMVSCGVHPDMYTFNILLDGLCD 406
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 175/415 (42%), Gaps = 49/415 (11%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK 107
R FS + Y E + + +F +A+ + DMA+ P + + L+ + K
Sbjct: 39 RAFSGR-SDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEA 97
Query: 108 AFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
+ + GI D ++ LI CR RLS A +M++ G P + L+N
Sbjct: 98 VISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVN 157
Query: 168 YYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMAD 227
+C F +A+ L D+++ G+ P++VIYN I C G+V AL +L+ M
Sbjct: 158 GFCHVNRFYEAMSLVDQIVGLGY-----EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKK 212
Query: 228 MGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYST 287
MG+ PDVV+Y ++I G + + +M GI D +T+S
Sbjct: 213 MGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGIS-------------PDVITFSA 259
Query: 288 LINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSL----VRW 343
LI+ + +G L++A +EM + S + V + INGL EAK+ L +
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 344 FYQDCLSIPAYRTYDTLIEN-CS----NNEFKTVVGLVKD---------------FSMRG 383
F+ P TY+TLI C ++ K + + +D + G
Sbjct: 320 FF------PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 384 LAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIG 438
A K +M+ P+ +N+L+ C HG + KA ++ S +G
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG 428
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 5/259 (1%)
Query: 8 KNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRA 67
K+ K + + PD S + L + + +L M+ G SP V T++ LI Y +
Sbjct: 208 KHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKE 267
Query: 68 DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTY 127
+ EA +M +R ++P++ TY LI G C G L +A ++ +V KG P+A TY
Sbjct: 268 GQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTY 327
Query: 128 GILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
LI C+ R+ + M R+GV + Y L YC G+FS A + M++
Sbjct: 328 NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 188 KGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKI 247
G PD + +N + G C G++ +AL L + +++Y +IKG CK
Sbjct: 388 CGVHPD-----MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKA 442
Query: 248 GEPVKAFELKLEMDEKGIP 266
+ A+ L + KG+
Sbjct: 443 DKVEDAWYLFCSLALKGVS 461
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 40/173 (23%)
Query: 27 HSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
++L+N Y +VD +L M G TYN L GYC+A +F A +L M
Sbjct: 328 NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFE-----MKAKMV--------------------- 116
G+ PD+ T+ L+ G C GK+GKA K+K V
Sbjct: 388 CGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVED 447
Query: 117 ---------HKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE-GVSPHK 159
KG+ PD TY +++ L RK +A +L+ +M +E G+ P K
Sbjct: 448 AWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMPIK 500
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 180/404 (44%), Gaps = 67/404 (16%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L+PDE + +L V +A + + M + F P++ + L++G+CR + EA
Sbjct: 198 LEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAK 256
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L M + GL PD+ + L+ G+ GK+ A+++ M +G P+ + Y +LI L
Sbjct: 257 EVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQAL 316
Query: 135 CR-KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
CR + R+ +A +F+EM R G YT L++ +C G K + D+M KG +P
Sbjct: 317 CRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 376
Query: 194 ------------------------------GISPSLVIYNARIHGCCVLGRVEEALGILR 223
G P L+IYN I C LG V+EA+ +
Sbjct: 377 QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWN 436
Query: 224 GMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI---PLYEDIYQSLLDDL- 279
M GLSP V ++ +I GF G ++A EM +GI P Y + +SLL++L
Sbjct: 437 EMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTL-KSLLNNLV 495
Query: 280 ---------------SDEVT--------YSTLINDFHAQGNLMDA--YCLESEMSEYSYL 314
S++ + ++ I+ +A+G++ +A YCL +M E +
Sbjct: 496 RDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCL--DMMEMDLM 553
Query: 315 TDDVISSVRINGLNK---KATTIEAKRSLVRWFYQDCLSIPAYR 355
+ + GLNK + E +V+ + +S Y+
Sbjct: 554 PQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMSFKMYK 597
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 154/376 (40%), Gaps = 69/376 (18%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDV---DTYYPLICGFCQTGKL 105
G+ S ++ + +F G++ +M R +P++ + + L+ F +
Sbjct: 126 GYFHSYEVCKSMVMILSKMRQFGAVWGLIEEM--RKTNPELIEPELFVVLMRRFASANMV 183
Query: 106 GKAFEMKAKMVHKGILPDADTYGILILTL------------------------------- 134
KA E+ +M G+ PD +G L+ L
Sbjct: 184 KKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLL 243
Query: 135 ---CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL 191
CR+G+L +A ++ ++M G+ P ++T L++ Y G+ + A DL ++M +GF
Sbjct: 244 YGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF- 302
Query: 192 PDGISPSLVIYNARIHGCC-VLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEP 250
P++ Y I C R++EA+ + M G D+V+YT +I GFCK G
Sbjct: 303 ----EPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMI 358
Query: 251 VKAFELKLEMDEKGIPLYEDIYQS----------------LLDDLS------DEVTYSTL 288
K + + +M +KG+ + Y L++ + D + Y+ +
Sbjct: 359 DKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVISSV-RINGLNKKATTIEAKRSLVRWFYQD 347
I G + +A L +EM E + L+ V + V ING + IEA +
Sbjct: 419 IRLACKLGEVKEAVRLWNEM-EANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRG 477
Query: 348 CLSIPAYRTYDTLIEN 363
S P Y T +L+ N
Sbjct: 478 IFSAPQYGTLKSLLNN 493
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 174/398 (43%), Gaps = 39/398 (9%)
Query: 42 LKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQ 101
L+ ++ G P+VA +L++ C+A+R K+A+ ++ M G+ PD Y L+ C+
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 102 TGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYI 161
G +G A ++ KM G + TY L+ LC G L+++ ++++G++P+ +
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 162 YTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGI 221
Y+ L+ + +A+ L DE+I KG P+LV YN + G C GR ++A+ +
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGG-----EPNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 222 LRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD 281
R + G +VVSY +++ C G +A L EMD D
Sbjct: 269 FRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGG-------------DRAPS 315
Query: 282 EVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVR--INGLNKKATTIEAKRS 339
VTY+ LIN G A + EMS+ ++ +S I L K+ +
Sbjct: 316 VVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKC 375
Query: 340 LVRWFYQDCLSIPAYRTYDTLIENCS-NNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHG 398
L Y+ C P TY+ + C N++ + +++ S + + HD
Sbjct: 376 LDEMIYRRCK--PNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNK----QKCCTHD----- 424
Query: 399 NYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
Y +I CR GN A+ + E G +
Sbjct: 425 -------FYKSVITSLCRKGNTFAAFQLLYEMTRCGFD 455
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 110/237 (46%), Gaps = 5/237 (2%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
++ L ++ KA +++ M+ G P + Y L++ C+ A+ ++ M G
Sbjct: 113 LYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGY 172
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
+ TY L+ G C G L ++ + +++ KG+ P+A TY L+ ++ +A
Sbjct: 173 PSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVK 232
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
L E++ +G P+ Y L+ +C +G A+ L E+ KGF ++V YN
Sbjct: 233 LLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGF-----KANVVSYNIL 287
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
+ C GR EEA +L M +P VV+Y +I G +A ++ EM +
Sbjct: 288 LRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSK 344
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 118/258 (45%), Gaps = 15/258 (5%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
D+A +L +IV+G P++ +YN L+ G+C+ R +A+ + R++ +G +V +Y
Sbjct: 227 TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM---- 150
L+ C G+ +A + A+M P TY ILI +L GR +A + EM
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 151 --LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHG 208
R + + + RL C +G+ + DEMI + P+ + YNA
Sbjct: 347 HQFRVTATSYNPVIARL----CKEGKVDLVVKCLDEMIYRRCKPNEGT-----YNAIGSL 397
Query: 209 CCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLY 268
C +V+EA I++ +++ Y +VI C+ G AF+L EM G
Sbjct: 398 CEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPD 457
Query: 269 EDIYQSLLDDLSDEVTYS 286
Y +L+ L E ++
Sbjct: 458 AHTYSALIRGLCLEGMFT 475
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK--RGLSPDVDTYY 93
++A+++L M +PSV TYN LI+ R ++A+ +L++M+K +Y
Sbjct: 298 EEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYN 357
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL----------------------- 130
P+I C+ GK+ + +M+++ P+ TY +
Sbjct: 358 PVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNK 417
Query: 131 ------------ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
I +LCRKG AF L EM R G P + Y+ L+ C +G F+ A
Sbjct: 418 QKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGA 477
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYT 238
+++ M + P++ +NA I G C + R + A+ + M + P+ +Y
Sbjct: 478 MEVLSIMEES----ENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYA 533
Query: 239 NVIKGF 244
+++G
Sbjct: 534 ILVEGI 539
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 131/325 (40%), Gaps = 51/325 (15%)
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
L +F +V G P+ L+ LC+ RL KA + M+ G+ P YT
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPS-LVIYNARIHGCCVLGRVEEALGILR 223
L+N C +G A+ L ++M + G+ PS V YNA + G C+LG + ++L +
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGY------PSNTVTYNALVRGLCMLGSLNQSLQFVE 200
Query: 224 GMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL---- 279
+ GL+P+ +Y+ F L+ E+G D LLD++
Sbjct: 201 RLMQKGLAPNAFTYS---------------FLLEAAYKERGT----DEAVKLLDEIIVKG 241
Query: 280 --SDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAK 337
+ V+Y+ L+ F +G DA L E+ + + V ++ + L EA
Sbjct: 242 GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEAN 301
Query: 338 RSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLH 397
L D P+ TY+ LI + + G +A + +M
Sbjct: 302 SLLAEMDGGD--RAPSVVTYNILINS---------------LAFHGRTEQALQVLKEMSK 344
Query: 398 GN--YKPEGAIYNLLIFDHCRHGNV 420
GN ++ YN +I C+ G V
Sbjct: 345 GNHQFRVTATSYNPVIARLCKEGKV 369
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 185/416 (44%), Gaps = 27/416 (6%)
Query: 30 LNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDV 89
L+V Q++ A +L ++ G +P+V T+ LI+G+C+ A + + M +RG+ PD+
Sbjct: 262 LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 90 DTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLE 149
Y LI G+ + G LG ++ ++ +HKG+ D + I + G L+ A ++
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 150 MLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGC 209
ML +G+SP+ YT L+ C G +A + +++ + G+ PS+V Y++ I G
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-----GMEPSIVTYSSLIDGF 436
Query: 210 CVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYE 269
C G + + M MG PDVV Y ++ G K G + A ++M + I L
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496
Query: 270 DIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRIN---- 325
++ SL+D + + F LM Y ++ +++ ++ + I R+
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFR----LMGIYGIKPDVATFTTVMRVSIMEGRLEEALF 552
Query: 326 --------GLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVK 377
GL A A +L+ F + + +D + N + + ++
Sbjct: 553 LFFRMFKMGLEPDAL---AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 378 DFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHC---RHGNVHKAYDMYKET 430
A+K + ++ G +P+ YN +I +C R + +++ K T
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 665
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 19/293 (6%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+V KA + + ++ RGF + + N+++ G D+ + A +L + G +P+V T+
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFC 290
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI GFC+ G++ +AF++ M +GI PD Y LI + G L LF + L +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
GV +++ ++ Y G+ + A ++ K L GISP++V Y I G C G
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATA-----SVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
R+ EA G+ + G+ P +V+Y+++I GFCK G F L +M + G P
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP------- 458
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRING 326
D V Y L++ QG ++ A +M S + V+ + I+G
Sbjct: 459 ------PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 144/311 (46%), Gaps = 53/311 (17%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADR------- 69
P+ + ++ ++D+A ++ K M RG P + Y+ LI GY +A
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 70 FKEAVG----------------------------ILRDMAKRGLSPDVDTYYPLICGFCQ 101
F +A+ + + M +G+SP+V TY LI G CQ
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 102 TGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYI 161
G++ +AF M +++ +G+ P TY LI C+ G L F L+ +M++ G P I
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 162 YTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGI 221
Y L++ +G A+ +M+ + I ++V++N+ I G C L R +EAL +
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQ-----SIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 222 LRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD 281
R M G+ PDV ++T V++ V E +L E+ + L+ +++ L+ D
Sbjct: 519 FRLMGIYGIKPDVATFTTVMR--------VSIMEGRL---EEALFLFFRMFKMGLE--PD 565
Query: 282 EVTYSTLINDF 292
+ Y TLI+ F
Sbjct: 566 ALAYCTLIDAF 576
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 180/452 (39%), Gaps = 70/452 (15%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++ +A M ++ RG PS+ TY+ LI G+C+ + + DM K G PDV Y
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ G + G + A KM+ + I + + LI CR R +A +F M
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG------------------- 194
G+ P +T +M +G +AL L M G PD
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 195 -----------ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
IS + + N IH R+E+A + + + PD+V+Y +I G
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 244 FC---KIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMD 300
+C ++ E + FEL L++ G + VT + LI+ ++
Sbjct: 646 YCSLRRLDEAERIFEL-LKVTPFG---------------PNTVTLTILIHVLCKNNDMDG 689
Query: 301 AYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTL 360
A + S M+E + V ++ + K+ IE L + +S P+ +Y +
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFS-KSVDIEGSFKLFEEMQEKGIS-PSIVSYSII 747
Query: 361 IENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNV 420
I+ GL K RG +A + + P+ Y +LI +C+ G +
Sbjct: 748 ID-----------GLCK----RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 421 HKAYDMYKETVHSGVE----IGRAEPSFTWPR 448
+A +Y+ + +GV+ + RA + P+
Sbjct: 793 VEAALLYEHMLRNGVKPDDLLQRALSEYNPPK 824
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 17/244 (6%)
Query: 2 MITASCKNNKAVI----LDPDERNLLSQ--------VHSLLNVYQVDKAHNMLKYMIVRG 49
+I A CK+ K I D +RN +S +H L ++++ A +I
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
P + TYN +I GYC R EA I + P+ T LI C+ + A
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
M + M KG P+A TYG L+ + + +F LF EM +G+SP Y+ +++
Sbjct: 692 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
C +G +A ++ + I+ LPD +V Y I G C +GR+ EA + M G
Sbjct: 752 CKRGRVDEATNIFHQAIDAKLLPD-----VVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Query: 230 LSPD 233
+ PD
Sbjct: 807 VKPD 810
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 170/408 (41%), Gaps = 56/408 (13%)
Query: 36 DKAHNMLKYMIVRG--FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
D + + ++++R F + ++E+I R F +G +RD R L DV +
Sbjct: 99 DPSFYTIAHVLIRNGMFDVADKVFDEMITN--RGKDF-NVLGSIRD---RSLDADVCKFL 152
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
C C+ G + KA E+ G++ D+ ++ +L R+ D F ++ R
Sbjct: 153 MECC--CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRG 210
Query: 154 GVSP-----HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHG 208
G+ P H ++ L +C KGE +KALD ++ +GF +V N + G
Sbjct: 211 GIEPSGVSAHGFVLDAL---FC-KGEVTKALDFHRLVMERGF-----RVGIVSCNKVLKG 261
Query: 209 CCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLY 268
V ++E A +L + D G +P+VV++ +I GFCK GE +AF+L M+++GI
Sbjct: 262 LSV-DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE-- 318
Query: 269 EDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLN 328
D + YSTLI+ + G L + L S+ D V+ S I+
Sbjct: 319 -----------PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYV 367
Query: 329 KKATTIEA----KRSL--------------VRWFYQDCLSIPAYRTYDTLIENCSNNEFK 370
K A KR L ++ QD A+ Y +++
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427
Query: 371 TVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHG 418
T L+ F G ++ M+ Y P+ IY +L+ + G
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
K P+ L +H L +D A M M +G P+ TY L+ + ++
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 722
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
+ + + +M ++G+SP + +Y +I G C+ G++ +A + + + +LPD Y IL
Sbjct: 723 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 782
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDE 184
I C+ GRL +A L+ MLR GV P + L Y K SK + + D+
Sbjct: 783 IRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVHDK 836
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 202/464 (43%), Gaps = 73/464 (15%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+++A +++ M G +A Y+ ++ GY K+ + + + + + G +P V TY
Sbjct: 430 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 489
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI + + GK+ KA E+ M +G+ + TY ++I + + AF +F +M++EG
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEM-------INKGFLPD-------------- 193
+ P +Y +++ +C G +A+ EM + F+P
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 194 ---------GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGF 244
G P++ +N I+G ++E+A+ IL M G+S + +YT +++G+
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 245 CKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCL 304
+G+ KAFE + +G+ + DI+ TY L+ G + A +
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDV--DIF-----------TYEALLKACCKSGRMQSALAV 716
Query: 305 ESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENC 364
EMS + + + ++ I+G ++ EA L++ ++ + P TY + I C
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAA-DLIQQMKKEGVK-PDIHTYTSFISAC 774
Query: 365 SNN--------------------EFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEG 404
S KT L+K ++ L KA +++M KP+
Sbjct: 775 SKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDK 834
Query: 405 AIYNLLIFDHCRHGNVHKAY------DMYKETVHSG--VEIGRA 440
A+Y+ L+ ++ +AY + KE V +G V++G A
Sbjct: 835 AVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTA 878
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 126/263 (47%), Gaps = 5/263 (1%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P R + +H + ++ + M G P+V T+N LI+G + ++AV I
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEI 646
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L +M G+S + TY ++ G+ G GKAFE ++ ++G+ D TY L+ C+
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK 706
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
GR+ A + EM + + ++Y L++ + +G+ +A DL +M +G PD
Sbjct: 707 SGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD--- 763
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
+ Y + I C G + A + M +G+ P++ +YT +IKG+ + P KA
Sbjct: 764 --IHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 257 KLEMDEKGIPLYEDIYQSLLDDL 279
EM GI + +Y LL L
Sbjct: 822 YEEMKAMGIKPDKAVYHCLLTSL 844
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 176/405 (43%), Gaps = 43/405 (10%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
+A + M RG +P+ Y LIH Y EA+ +R M + G+ + TY ++
Sbjct: 327 RARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIV 386
Query: 97 CGFCQTGKLGKA---FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
GF + G A F+ +AK +HK + +A YG +I C+ + +A L EM E
Sbjct: 387 GGFSKAGHAEAADYWFD-EAKRIHKTL--NASIYGKIIYAHCQTCNMERAEALVREMEEE 443
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ IY +M+ Y + K L ++ K G +P++V Y I+ +G
Sbjct: 444 GIDAPIAIYHTMMDGYTMVADEKKGL-----VVFKRLKECGFTPTVVTYGCLINLYTKVG 498
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
++ +AL + R M + G+ ++ +Y+ +I GF K+ + AF + +M ++G+
Sbjct: 499 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK------- 551
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
D + Y+ +I+ F GN+ A EM + + I+G K
Sbjct: 552 ------PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG-- 603
Query: 334 IEAKRSL-VRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAH 392
+ +RSL V + C +P T++ LI GLV+ M KA +
Sbjct: 604 -DMRRSLEVFDMMRRCGCVPTVHTFNGLIN-----------GLVEKRQM----EKAVEIL 647
Query: 393 DKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
D+M Y ++ + G+ KA++ + + G+++
Sbjct: 648 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 14/210 (6%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++ A + K M R + YN LI G+ R EA +++ M K G+ PD+ TY
Sbjct: 709 RMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYT 768
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
I + G + +A + +M G+ P+ TY LI R KA + EM
Sbjct: 769 SFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAM 828
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKA------LDLPDEMINKGFLPDGISPSLVIYNARIH 207
G+ P K +Y L+ + ++A + + EM+ G + D +H
Sbjct: 829 GIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVD--------MGTAVH 880
Query: 208 GCCVLGRVEEALGILRGMADMGLSPDVVSY 237
L ++E + G L PD S+
Sbjct: 881 WSKCLCKIEASGGELTETLQKTFPPDWSSH 910
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 128/328 (39%), Gaps = 44/328 (13%)
Query: 122 PDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDL 181
P +G+++ R+G + +A + F M G++P IYT L++ Y + +AL
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 182 PDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI 241
+M +GI SLV Y+ + G G E A + + + Y +I
Sbjct: 367 VRKMKE-----EGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKII 421
Query: 242 KGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDD---LSDE---------------- 282
C+ +A L EM+E+GI IY +++D ++DE
Sbjct: 422 YAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFT 481
Query: 283 ---VTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRS 339
VTY LIN + G + A + M E + S+ ING K
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK---------- 531
Query: 340 LVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGN 399
L W A+ ++ +++ + ++ F G +A + +M
Sbjct: 532 LKDW-------ANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 400 YKPEGAIYNLLIFDHCRHGNVHKAYDMY 427
++P + +I + + G++ ++ +++
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 148/293 (50%), Gaps = 28/293 (9%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
++SL+ D + K M+ G ++ YN L+H ++ ++A +L +M ++G+
Sbjct: 175 LNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGV 234
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD+ TY LI +C+ +A ++ +M G+ P+ TY I R+GR+ +A
Sbjct: 235 FPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATR 294
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
LF E +++ V+ + YT L++ YC + +AL L + M ++GF SP +V YN+
Sbjct: 295 LFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGF-----SPGVVTYNSI 348
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
+ C GR+ EA +L M+ + PD ++ +I +CKI + V A ++K +M E G+
Sbjct: 349 LRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGL 408
Query: 266 PLYEDIYQSL---------LDDLSDEV-------------TYSTLINDFHAQG 296
L Y++L L++ +E+ TYS L++ F+ Q
Sbjct: 409 KLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQN 461
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 158/357 (44%), Gaps = 31/357 (8%)
Query: 56 TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM 115
++ L+ Y +A +++ + + GL P + L+ + +++ KM
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
V G++ + Y +L+ + G KA L EM +GV P + Y L++ YC K
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
+AL + D M G++P++V YN+ IHG GR+ EA + R + D ++ + V
Sbjct: 255 FEALSVQDRMER-----SGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHV 308
Query: 236 SYTNVIKGFCKIGEPVKAFELKLEMDEK----GIPLYEDIYQSLLDD------------- 278
+YT +I G+C++ + +A L+ M+ + G+ Y I + L +D
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 279 -----LSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
D +T +TLIN + +++ A ++ +M E D I+G K
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 334 IEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSN-NEFKTVVGLVKDFSMRGLAHKAA 389
AK L + S P Y TY L++ N N+ + L+++F RGL A
Sbjct: 429 ENAKEELFS-MIEKGFS-PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA 483
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 5/241 (2%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+D+A + + M RGFSP V TYN ++ C R +EA +L +M+ + + PD T
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI +C+ + A ++K KM+ G+ D +Y LI C+ L A + M+ +G
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
SP Y+ L++ + + + + L +E +G D + +Y I C L +
Sbjct: 443 FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCAD-----VALYRGLIRRICKLEQ 497
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
V+ A + M GL D V +T + + + G+ +A L M + + + +Y+S
Sbjct: 498 VDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKS 557
Query: 275 L 275
+
Sbjct: 558 I 558
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 18/250 (7%)
Query: 55 ATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAK 114
TY LI GYCR + EA+ + M RG SP V TY ++ C+ G++ +A + +
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 115 MVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
M K I PD T LI C+ + A + +M+ G+ Y Y L++ +C E
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLE 427
Query: 175 FSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
A + MI KGF SP Y+ + G + +E +L GL DV
Sbjct: 428 LENAKEELFSMIEKGF-----SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADV 482
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHA 294
Y +I+ CK+ + A L M++KG+ + D V ++T+ +
Sbjct: 483 ALYRGLIRRICKLEQVDYAKVLFESMEKKGL-------------VGDSVIFTTMAYAYWR 529
Query: 295 QGNLMDAYCL 304
G + +A L
Sbjct: 530 TGKVTEASAL 539
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 5/221 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++ +A+ +L M + P T N LI+ YC+ + AV + + M + GL D+ +Y
Sbjct: 357 RIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYK 416
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI GFC+ +L A E M+ KG P TY L+ + + + L E +
Sbjct: 417 ALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKR 476
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ +Y L+ C + A L + M KG + D VI+ + G
Sbjct: 477 GLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDS-----VIFTTMAYAYWRTG 531
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+V EA + M + L ++ Y ++ + + ++ F
Sbjct: 532 KVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFF 572
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++PD + +++ + + A + K MI G + +Y LIHG+C+ + A
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAK 432
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
L M ++G SP TY L+ GF K + ++ + +G+ D Y LI +
Sbjct: 433 EELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRI 492
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
C+ ++ A LF M ++G+ I+T + Y G+ ++A L D M N+ + +
Sbjct: 493 CKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVN 551
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 132/251 (52%), Gaps = 6/251 (2%)
Query: 14 ILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEA 73
+ PD S + ++ +A ++L M+ G P+ T+N L+ GY +A A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 74 VGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
I M G PDV T+ LI G+C+ G++ + F + +M +G+ P+A TY ILI
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
LC + RL KA +L ++ + + P ++Y +++ +C G+ ++A + +EM K PD
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
I+ +++I G C+ GR+ EA+ I M +G SPD ++ ++++ K G +A
Sbjct: 452 KITFTILII-----GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Query: 254 FELKLEMDEKG 264
+ L ++ KG
Sbjct: 507 YHLN-QIARKG 516
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 25/317 (7%)
Query: 26 VHSLLN-VYQVDKAHNMLKYM---IVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMA 81
V+SLLN + ++D+ + +K + T+N LI G C + ++A+ +L M+
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 82 KRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGIL--PDADTYGILILTLCRKGR 139
G PD+ TY LI GFC++ +L KA EM K V G + PD TY +I C+ G+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEM-FKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
+ +A L +MLR G+ P + L++ Y GE A ++ +MI+ G PD +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD-----V 347
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
V + + I G C +G+V + + M G+ P+ +Y+ +I C +KA EL +
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQ 407
Query: 260 MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
+ K D + Y+ +I+ F G + +A + EM + D +
Sbjct: 408 LASK-------------DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 320 SSVRINGLNKKATTIEA 336
++ I G K EA
Sbjct: 455 FTILIIGHCMKGRMFEA 471
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 165/415 (39%), Gaps = 67/415 (16%)
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLG------ 106
S TYN L C+A A + M G+SP+ L+ F + GKL
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 107 -KAFEMKAK-MVHKGILP-------------------------DADTYGILILTLCRKGR 139
++FE++ MV +L D T+ ILI LC G+
Sbjct: 162 LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
KA +L M G P Y L+ +C E +KA EM SP +
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKA----SEMFKDVKSGSVCSPDV 277
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
V Y + I G C G++ EA +L M +G+ P V++ ++ G+ K GE + A E++ +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 260 MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
M G D VT+++LI+ + G + + L EM+ +
Sbjct: 338 MISFGC-------------FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 320 SSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDF 379
S+ IN L + ++A+ L + +D IP Y+ +I+ F
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDI--IPQPFMYNPVIDG---------------F 427
Query: 380 SMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
G ++A ++M KP+ + +LI HC G + +A ++ + V G
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 132/251 (52%), Gaps = 6/251 (2%)
Query: 14 ILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEA 73
+ PD S + ++ +A ++L M+ G P+ T+N L+ GY +A A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 74 VGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
I M G PDV T+ LI G+C+ G++ + F + +M +G+ P+A TY ILI
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
LC + RL KA +L ++ + + P ++Y +++ +C G+ ++A + +EM K PD
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
I+ +++I G C+ GR+ EA+ I M +G SPD ++ ++++ K G +A
Sbjct: 452 KITFTILII-----GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Query: 254 FELKLEMDEKG 264
+ L ++ KG
Sbjct: 507 YHLN-QIARKG 516
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 25/317 (7%)
Query: 26 VHSLLN-VYQVDKAHNMLKYM---IVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMA 81
V+SLLN + ++D+ + +K + T+N LI G C + ++A+ +L M+
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 82 KRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGIL--PDADTYGILILTLCRKGR 139
G PD+ TY LI GFC++ +L KA EM K V G + PD TY +I C+ G+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEM-FKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
+ +A L +MLR G+ P + L++ Y GE A ++ +MI+ G PD +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD-----V 347
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
V + + I G C +G+V + + M G+ P+ +Y+ +I C +KA EL +
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQ 407
Query: 260 MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
+ K D + Y+ +I+ F G + +A + EM + D +
Sbjct: 408 LASK-------------DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 320 SSVRINGLNKKATTIEA 336
++ I G K EA
Sbjct: 455 FTILIIGHCMKGRMFEA 471
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 165/415 (39%), Gaps = 67/415 (16%)
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLG------ 106
S TYN L C+A A + M G+SP+ L+ F + GKL
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 107 -KAFEMKAK-MVHKGILP-------------------------DADTYGILILTLCRKGR 139
++FE++ MV +L D T+ ILI LC G+
Sbjct: 162 LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
KA +L M G P Y L+ +C E +KA EM SP +
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKA----SEMFKDVKSGSVCSPDV 277
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
V Y + I G C G++ EA +L M +G+ P V++ ++ G+ K GE + A E++ +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 260 MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
M G D VT+++LI+ + G + + L EM+ +
Sbjct: 338 MISFGC-------------FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 320 SSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDF 379
S+ IN L + ++A+ L + +D IP Y+ +I+ F
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDI--IPQPFMYNPVIDG---------------F 427
Query: 380 SMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
G ++A ++M KP+ + +LI HC G + +A ++ + V G
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 16/245 (6%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A N+ M +G P V TY+ +I +CR+ R+ +A +LRDM +R ++PDV T+ LI
Sbjct: 95 AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN 154
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
+ GK+ +A E+ M+ +GI P TY +I C++ RL+ A + M + SP
Sbjct: 155 ALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSP 214
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
++ L+N YC +++ EM + GI + V Y IHG C +G ++
Sbjct: 215 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRR-----GIVANTVTYTTLIHGFCQVGDLDA 269
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
A +L M G++P+ +++ +++ C E KAF + ED+ +S
Sbjct: 270 AQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF-----------AILEDLQKSEGH 318
Query: 278 DLSDE 282
L DE
Sbjct: 319 HLEDE 323
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 137/282 (48%), Gaps = 22/282 (7%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + ++ L +V +A ++ M+ G P Y +I+G C+ + A+ +
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L M + + V Y +I C+ G A + +M KGI PD TY +I + CR
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
GR + A L +M+ ++P ++ L+N +G+ S+A ++ +M+ + GI
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR-----GIF 178
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P+ + YN+ I G C R+ +A +L MA SPDVV+++ +I G+CK E+
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNL 298
EM +GI +++ VTY+TLI+ F G+L
Sbjct: 239 FCEMHRRGI-------------VANTVTYTTLIHGFCQVGDL 267
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 5/254 (1%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
++ L + + A N+L M V YN +I C+ A + +M +G+
Sbjct: 48 INGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGI 107
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PDV TY +I FC++G+ A ++ M+ + I PD T+ LI L ++G++S+A +
Sbjct: 108 FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEE 167
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
++ +MLR G+ P Y +++ +C + + A + D M +K SP +V ++
Sbjct: 168 IYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK-----SCSPDVVTFSTL 222
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
I+G C RV+ + I M G+ + V+YT +I GFC++G+ A +L M G+
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 266 PLYEDIYQSLLDDL 279
+QS+L L
Sbjct: 283 APNYITFQSMLASL 296
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 92/171 (53%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++PD + +++L+ +V +A + M+ RG P+ TYN +I G+C+ DR +A
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAK 201
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L MA + SPDV T+ LI G+C+ ++ E+ +M +GI+ + TY LI
Sbjct: 202 RMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 261
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEM 185
C+ G L A DL M+ GV+P+ + ++ C K E KA + +++
Sbjct: 262 CQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 131/322 (40%), Gaps = 41/322 (12%)
Query: 115 MVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
MV G PD T+ L+ LC +GR+ +A L M+ EG P Y ++N C G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 175 FSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
AL+L +M I +VIYNA I C G A + M D G+ PDV
Sbjct: 57 TESALNLLSKMEET-----HIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDV 111
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHA 294
++Y+ +I FC+ G A +L +M E+ I D VT+S LIN
Sbjct: 112 ITYSGMIDSFCRSGRWTDAEQLLRDMIERQIN-------------PDVVTFSALINALVK 158
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
+G + +A + +M + + I+G K+ +AKR L + C P
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC--SPDV 216
Query: 355 RTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFD 413
T+ TLI C + + + RG+ Y LI
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT----------------YTTLIHG 260
Query: 414 HCRHGNVHKAYDMYKETVHSGV 435
C+ G++ A D+ + SGV
Sbjct: 261 FCQVGDLDAAQDLLNVMISSGV 282
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 121/252 (48%), Gaps = 6/252 (2%)
Query: 14 ILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEA 73
++ PD + V+ + V +A + ++I G P TY I G+CR A
Sbjct: 150 LVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAA 209
Query: 74 VGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
+ ++M + G + +Y LI G + K+ +A + KM P+ TY +LI
Sbjct: 210 FKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDA 269
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
LC G+ S+A +LF +M G+ P +YT L+ +C +A L + M+ G +P+
Sbjct: 270 LCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPN 329
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
I+ YNA I G C V +A+G+L M + L PD+++Y +I G C G A
Sbjct: 330 VIT-----YNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Query: 254 FELKLEMDEKGI 265
+ L M+E G+
Sbjct: 384 YRLLSLMEESGL 395
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 141/290 (48%), Gaps = 22/290 (7%)
Query: 21 NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM 80
NLLS SL V++ + M+ SP + T+N L++GYC+ EA + +
Sbjct: 125 NLLS---SLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 81 AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRL 140
+ G PD TY I G C+ ++ AF++ +M G + +Y LI L ++
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 141 SKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
+A L ++M + P+ YT L++ C G+ S+A++L +M G PD
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDD-----C 296
Query: 201 IYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM 260
+Y I C ++EA G+L M + GL P+V++Y +IKGFCK KA L +M
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKM 355
Query: 261 DEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSE 310
E Q+L+ DL +TY+TLI + GNL AY L S M E
Sbjct: 356 LE----------QNLVPDL---ITYNTLIAGQCSSGNLDSAYRLLSLMEE 392
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
DPD S + +VD A + K M G + +Y +LI+G A + EA+
Sbjct: 187 DPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALS 246
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+L M P+V TY LI C +G+ +A + +M GI PD Y +LI + C
Sbjct: 247 LLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFC 306
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
L +A L ML G+ P+ Y L+ +C K KA+ L +M+ + +PD
Sbjct: 307 SGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPD-- 363
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPD 233
L+ YN I G C G ++ A +L M + GL P+
Sbjct: 364 ---LITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 159/391 (40%), Gaps = 50/391 (12%)
Query: 47 VRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLG 106
+ F +V +Y L+ C + E I M K S D + + FC+T + G
Sbjct: 53 IPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVR-DALF--VVDFCRTMRKG 109
Query: 107 KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLM 166
+FE+K K+ K Y L+ +L R G + + L+ EML + VSP Y + L+
Sbjct: 110 DSFEIKYKLTPK-------CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLV 162
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA 226
N YC G +A +I G PD + Y + I G C V+ A + + M
Sbjct: 163 NGYCKLGYVVEAKQYVTWLIQAGCDPDYFT-----YTSFITGHCRRKEVDAAFKVFKEMT 217
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM-DEKGIPLYEDIYQSLLDDLSDEVTY 285
G + VSYT +I G + + +A L ++M D+ P + TY
Sbjct: 218 QNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCP--------------NVRTY 263
Query: 286 STLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFY 345
+ LI+ G +A L +MSE DD + +V I T EA L+
Sbjct: 264 TVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEAS-GLLEHML 322
Query: 346 QDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEG 404
++ L +P TY+ LI+ C N HKA KML N P+
Sbjct: 323 ENGL-MPNVITYNALIKGFCKKN-----------------VHKAMGLLSKMLEQNLVPDL 364
Query: 405 AIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
YN LI C GN+ AY + SG+
Sbjct: 365 ITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P+ R + +L Q +A N+ K M G P Y LI +C D EA G+
Sbjct: 258 PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGL 317
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L M + GL P+V TY LI GFC+ + KA + +KM+ + ++PD TY LI C
Sbjct: 318 LEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCS 376
Query: 137 KGRLSKAFDLFLEMLREGVSPHK 159
G L A+ L M G+ P++
Sbjct: 377 SGNLDSAYRLLSLMEESGLVPNQ 399
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD+ + S + +D+A +L++M+ G P+V TYN LI G+C+ + K A+
Sbjct: 291 IKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHK-AM 349
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADT 126
G+L M ++ L PD+ TY LI G C +G L A+ + + M G++P+ T
Sbjct: 350 GLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 175/407 (42%), Gaps = 39/407 (9%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++D A + K MI G P + T+N L++G C+A ++A G++R+M + G SP+ +Y
Sbjct: 136 KLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYN 195
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML-- 151
LI G C + KA + M GI P+ T I++ LC+KG + LE +
Sbjct: 196 TLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILD 255
Query: 152 -REGVSPHKYIYTRLMNYYCFK-GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGC 209
+ +P + ++ CFK G +AL++ EM K D V+YN I G
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS-----VVYNVIIRGL 310
Query: 210 CVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYE 269
C G + A G + M G++PDV +Y +I CK G+ +A +L M G+
Sbjct: 311 CSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVA--- 367
Query: 270 DIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNK 329
D+++Y +I G++ A M + S L + ++ +V I+G +
Sbjct: 368 ----------PDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 330 KATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAA 389
T A LS+ + N N L+ + G A
Sbjct: 418 YGDTSSA------------LSVLNLMLSYGVKPNVYTNN-----ALIHGYVKGGRLIDAW 460
Query: 390 KAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
++M P+ YNLL+ C G++ A+ +Y E + G +
Sbjct: 461 WVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ 507
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 130/285 (45%), Gaps = 18/285 (6%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
V +A + K M + YN +I G C + A G + DM KRG++PDV TY
Sbjct: 280 NVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYN 339
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI C+ GK +A ++ M + G+ PD +Y ++I LC G +++A + L ML+
Sbjct: 340 TLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKS 399
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
+ P ++ +++ Y G+ S AL + + M L G+ P++ NA IHG G
Sbjct: 400 SLLPEVLLWNVVIDGYGRYGDTSSALSVLNLM-----LSYGVKPNVYTNNALIHGYVKGG 454
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
R+ +A + M + PD +Y ++ C +G AF+L EM +G
Sbjct: 455 RLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ------- 507
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDV 318
D +TY+ L+ +G L A L S + D V
Sbjct: 508 ------PDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHV 546
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 174/434 (40%), Gaps = 74/434 (17%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
++KA +++ M G SP+ +YN LI G C + +A+ + M K G+ P+ T
Sbjct: 172 IEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNI 231
Query: 95 LICGFCQTGKLG---------------------------------------KAFEMKAKM 115
++ CQ G +G +A E+ +M
Sbjct: 232 IVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM 291
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
K + D+ Y ++I LC G + A+ +M++ GV+P + Y L++ C +G+F
Sbjct: 292 SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKF 351
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
+A DL M N G PD IS Y I G C+ G V A L M L P+V+
Sbjct: 352 DEACDLHGTMQNGGVAPDQIS-----YKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVL 406
Query: 236 SYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQ 295
+ VI G+ + G+ A + M G+ ++Y T + LI+ +
Sbjct: 407 LWNVVIDGYGRYGDTSSALSVLNLMLSYGVK--PNVY-----------TNNALIHGYVKG 453
Query: 296 GNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYR 355
G L+DA+ +++EM D + N L A T+ R A++
Sbjct: 454 GRLIDAWWVKNEMRSTKIHPD----TTTYNLLLGAACTLGHLR-------------LAFQ 496
Query: 356 TYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHC 415
YD ++ + T LV+ +G KA ++ + + +L +
Sbjct: 497 LYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYT 556
Query: 416 RHGNVHKAYDMYKE 429
R +AY +YK+
Sbjct: 557 RLQRPGEAYLVYKK 570
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD+ + + L V++A+ L M+ P V +N +I GY R A+ +
Sbjct: 368 PDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L M G+ P+V T LI G+ + G+L A+ +K +M I PD TY +L+ C
Sbjct: 428 LNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACT 487
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G L AF L+ EMLR G P YT L+ C+KG KA L + G D +
Sbjct: 488 LGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHV- 546
Query: 197 PSLVI 201
P L++
Sbjct: 547 PFLIL 551
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 135/344 (39%), Gaps = 54/344 (15%)
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKM-VHKGILPDADTYGILILTLCRKGRLSKA 143
L +D L CQT K+F+ + +H I+ D LC +G+L A
Sbjct: 95 LKSSLDRLASLRESVCQT----KSFDYDDCLSIHSSIMRD----------LCLQGKLDAA 140
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
L +M+ GV P + L+N C G KA L EM G SP+ V YN
Sbjct: 141 LWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREM-----GPSPNCVSYN 195
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG----EPVKAFELKLE 259
I G C + V++AL + M G+ P+ V+ ++ C+ G K E L+
Sbjct: 196 TLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILD 255
Query: 260 MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
+ PL D V + L++ GN++ A + EMS+ + D V+
Sbjct: 256 SSQANAPL-------------DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 320 SSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDF 379
+V I GL + AY +++ N + T L+
Sbjct: 303 YNVIIRGLCSSGNM-----------------VAAYGFMCDMVKRGVNPDVFTYNTLISAL 345
Query: 380 SMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKA 423
G +A H M +G P+ Y ++I C HG+V++A
Sbjct: 346 CKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P TYN L+ C + A + +M +RG PD+ TY L+ G C G+L KA +
Sbjct: 473 PDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESL 532
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML---REGVS 156
+++ GI D + IL R R +A+ ++ + L GVS
Sbjct: 533 LSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGVS 580
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 197/475 (41%), Gaps = 84/475 (17%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H LL +A + + MI+ GF PS+ TY+ L+ G + +G+L++M GL
Sbjct: 195 IHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGL 254
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P+V T+ I + GK+ +A+E+ +M +G PD TY +LI LC +L A +
Sbjct: 255 KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 314
Query: 146 LF-----------------------------------LEMLREGVSPHKYIYTRLMNYYC 170
+F EM ++G P +T L++ C
Sbjct: 315 VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC 374
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
G F +A D D M ++G LP+ L YN I G + R+++AL + M +G+
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPN-----LHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIP---------LY-----------ED 270
P +Y I + K G+ V A E +M KGI LY +
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 271 IYQSLLDD--LSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLN 328
I+ L D + D VTY+ ++ + G + +A L SEM E D ++ + IN L
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 329 KKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCS-NNEFKTVVGLVKDFSMRGLAHK 387
K EA + +R ++ P TY+TL+ N + + + L + +G
Sbjct: 550 KADRVDEAWKMFMRM--KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 388 -------------------AAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKA 423
A K KM+ P+ YN +IF ++G V +A
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 185/435 (42%), Gaps = 43/435 (9%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD V +L +A + L M +G P++ TYN LI G R R +A+ +
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
+M G+ P TY I + ++G A E KM KGI P+ + +L +
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
GR +A +F + G+ P Y +M Y GE +A+ L EM+ G PD
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD--- 537
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
+++ N+ I+ RV+EA + M +M L P VV+Y ++ G K G+ +A EL
Sbjct: 538 --VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 257 KLEMDEKGIPLYEDIYQSLLDDL--SDEV--------------------TYSTLINDFHA 294
M +KG P + +L D L +DEV TY+T+I
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
G + +A C +M + Y D V + G+ KA+ IE ++ F +C PA
Sbjct: 656 NGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGV-VKASLIEDAYKIITNFLYNCADQPAN 713
Query: 355 RTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDH 414
++ LI + + G+ + + + + +G + +I +I
Sbjct: 714 LFWEDLIGSI--------------LAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS 759
Query: 415 CRHGNVHKAYDMYKE 429
C+H NV A ++++
Sbjct: 760 CKHNNVSGARTLFEK 774
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Query: 26 VHSLLNVYQVDKAHNML-KYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
+ L+ VD A ++ M R FSP+ TY LI G ++ R EA + M G
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
P+ Y LI GF + G+ A + +MV +G+ PD TY +L+ LC GR+ +
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 145 DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
F E+ G++P Y ++N +AL L +EM GI+P L YN+
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS----RGITPDLYTYNS 1037
Query: 205 RIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
I + G VEEA I + GL P+V ++ +I+G+ G+P A+ + M G
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Query: 265 IPLYEDIYQSL 275
Y+ L
Sbjct: 1098 FSPNTGTYEQL 1108
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 196/487 (40%), Gaps = 86/487 (17%)
Query: 11 KAVILDPDE--RNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRAD 68
K + L PD N++ + +S V ++D+A +L M+ G P V N LI+ +AD
Sbjct: 495 KDIGLVPDSVTYNMMMKCYS--KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 552
Query: 69 RFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYG 128
R EA + M + L P V TY L+ G + GK+ +A E+ MV KG P+ T+
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 612
Query: 129 ILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA---------L 179
L LC+ ++ A + +M+ G P + Y ++ G+ +A L
Sbjct: 613 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 672
Query: 180 DLPDEMINKGFLPDGISPSLV----------IYNARIHGCCVLGRVEEALGILRGMADMG 229
PD + LP + SL+ +YN + E+ +G + +A+ G
Sbjct: 673 VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFW--EDLIGSI--LAEAG 728
Query: 230 LSPDVVSYTN--VIKGFCKIGEPV---------------------KAFELKLEMDEKGIP 266
+ + VS++ V G C+ G+ + + F L + K +P
Sbjct: 729 ID-NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK-LP 786
Query: 267 LYEDIYQSLLDD------------------LSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
Y + LL+ + D TY+ L++ + G + + + L EM
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 309 SEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNE 368
S + + + ++ I+GL KA ++ L D P TY LI+ S +
Sbjct: 847 STHECEANTITHNIVISGL-VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS- 904
Query: 369 FKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYK 428
G ++A + + ML +P AIYN+LI + G A ++K
Sbjct: 905 --------------GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 429 ETVHSGV 435
V GV
Sbjct: 951 RMVKEGV 957
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 150/377 (39%), Gaps = 36/377 (9%)
Query: 60 LIHGYCRADRFKEAVGILRDMAKR-GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK 118
+I C+ + A + K G+ P + TY LI G + + A ++ ++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
G +PD TY L+ + G++ + F+L+ EM + + +++ G A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 179 LDLP-DEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSY 237
LDL D M ++ F SP+ Y I G GR+ EA + GM D G P+ Y
Sbjct: 875 LDLYYDLMSDRDF-----SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIY 929
Query: 238 TNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGN 297
+I GF K GE A L M ++G+ D TYS L++ G
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVR-------------PDLKTYSVLVDCLCMVGR 976
Query: 298 LMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTY 357
+ + E+ E D V ++ INGL K+ +E L P TY
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLG-KSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 358 DTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRH 417
++LI N + G+ +A K ++++ +P +N LI +
Sbjct: 1036 NSLILN---------------LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 418 GNVHKAYDMYKETVHSG 434
G AY +Y+ V G
Sbjct: 1081 GKPEHAYAVYQTMVTGG 1097
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 161/436 (36%), Gaps = 65/436 (14%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++ +A + + M+ +G P+ T+N L C+ D A+ +L M G PDV TY
Sbjct: 588 KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYN 647
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
+I G + G++ +A +M K + PD T L+ + + + A+ + L
Sbjct: 648 TIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYN 706
Query: 154 GV-SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG------------------ 194
P + L+ + A+ + ++ G DG
Sbjct: 707 CADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVS 766
Query: 195 --------------ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNV 240
+ P L YN I G +E A + + G PDV +Y +
Sbjct: 767 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 826
Query: 241 IKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMD 300
+ + K G+ + FEL EM S + ++ +T++ +I+ GN+ D
Sbjct: 827 LDAYGKSGKIDELFELYKEM-------------STHECEANTITHNIVISGLVKAGNVDD 873
Query: 301 AYCLESE-MSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDT 359
A L + MS+ + I+GL+K EAK+ C P Y+
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR--PNCAIYNI 931
Query: 360 LIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGN 419
LI F G A A +M+ +P+ Y++L+ C G
Sbjct: 932 LING---------------FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 420 VHKAYDMYKETVHSGV 435
V + +KE SG+
Sbjct: 977 VDEGLHYFKELKESGL 992
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 31/270 (11%)
Query: 115 MVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
M + I D +TY + +L KG L +A +M G + Y Y L+ + K
Sbjct: 144 MQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLI-HLLLKSR 202
Query: 175 F-SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPD 233
F ++A+++ MI +GF PSL Y++ + G ++ +G+L+ M +GL P+
Sbjct: 203 FCTEAMEVYRRMILEGF-----RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPN 257
Query: 234 VVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS------------- 280
V ++T I+ + G+ +A+E+ MD++G Y L+D L
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE 317
Query: 281 ---------DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKA 331
D VTY TL++ F +L SEM + ++ D V ++ ++ L K
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377
Query: 332 TTIEAKRSLVRWFYQDCLSIPAYRTYDTLI 361
EA +L Q L P TY+TLI
Sbjct: 378 NFGEAFDTLDVMRDQGIL--PNLHTYNTLI 405
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + V L V +VD+ + K + G +P V YN +I+G ++ R +EA+ +
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 77 LRDM-AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+M RG++PD+ TY LI G + +A ++ ++ G+ P+ T+ LI
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
G+ A+ ++ M+ G SP+ Y +L N
Sbjct: 1079 LSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 5/248 (2%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+ KA + K + G P+ +YN L+ +C D A + M +R + PDVD+Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI GFC+ G++ A E+ M++KG +PD +Y L+ +LCRK +L +A+ L M +G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+P Y ++ +C + A + D+M L +G SP+ V Y I G C G
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDM-----LSNGCSPNSVSYRTLIGGLCDQGM 345
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
+E L M G SP ++KGFC G+ +A ++ + + G L+ D ++
Sbjct: 346 FDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM 405
Query: 275 LLDDLSDE 282
++ + +E
Sbjct: 406 VIPLICNE 413
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 9/238 (3%)
Query: 17 PDER--NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
P+ R NLL Q L + + A+ + M+ R P V +Y LI G+CR + A+
Sbjct: 188 PNTRSYNLLMQAFCLNDDLSI--AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L DM +G PD +Y L+ C+ +L +A+++ +M KG PD Y +IL
Sbjct: 246 ELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGF 305
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
CR+ R A + +ML G SP+ Y L+ C +G F + +EMI+KGF
Sbjct: 306 CREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGF---- 361
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVK 252
SP + N + G C G+VEEA ++ + G + ++ VI C E K
Sbjct: 362 -SPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 418
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 7/181 (3%)
Query: 103 GKLGKAFEM-KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYI 161
G L KAFE+ K+ +H G++P+ +Y +L+ C LS A+ LF +ML V P
Sbjct: 169 GYLQKAFELFKSSRLH-GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 162 YTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGI 221
Y L+ +C KG+ + A++L D+M+NKGF+PD +S Y ++ C ++ EA +
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLS-----YTTLLNSLCRKTQLREAYKL 282
Query: 222 LRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD 281
L M G +PD+V Y +I GFC+ + A ++ +M G Y++L+ L D
Sbjct: 283 LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCD 342
Query: 282 E 282
+
Sbjct: 343 Q 343
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
+ V+ D D +L + QV+ A +L M+ +GF P +Y L++ CR +
Sbjct: 219 RDVVPDVDSYKIL--IQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
+EA +L M +G +PD+ Y +I GFC+ + A ++ M+ G P++ +Y L
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
I LC +G + EM+ +G SPH + L+ +C G+ +A D+ + ++ G
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 127/313 (40%), Gaps = 80/313 (25%)
Query: 129 ILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINK 188
IL + + +G L KAF+LF GV P+ Y LM +C + S A L +M+ +
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 189 GFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
+PD S Y I G C G+V A+ +L M + G PD +SYT ++ C+
Sbjct: 220 DVVPDVDS-----YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKT 274
Query: 249 EPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
+ +A++L M KG D V Y+T+I F + MDA
Sbjct: 275 QLREAYKLLCRMKLKGCN-------------PDLVHYNTMILGFCREDRAMDA------- 314
Query: 309 SEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNN- 367
+ DD++S NG CS N
Sbjct: 315 ---RKVLDDMLS----NG-------------------------------------CSPNS 330
Query: 368 -EFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDM 426
++T++G + D +G+ + K ++M+ + P ++ N L+ C G V +A D+
Sbjct: 331 VSYRTLIGGLCD---QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV 387
Query: 427 YK------ETVHS 433
+ ET+HS
Sbjct: 388 VEVVMKNGETLHS 400
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 21/288 (7%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+PDE + +L V A + + M +R F ++ + L++G+CR + EA
Sbjct: 214 FEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAK 272
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L M + G PD+ Y L+ G+ GK+ A+++ M +G P+A+ Y +LI L
Sbjct: 273 YVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQAL 332
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C+ R+ +A +F+EM R YT L++ +C G+ K + D+MI KG +P
Sbjct: 333 CKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSE 392
Query: 195 IS-PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
++ +++ + + EE L ++ M + PD+ Y VI+ CK+GE +A
Sbjct: 393 LTYMHIMVAHEKKES------FEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEA 446
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDA 301
L EM+E G+ D T+ +IN +QG L++A
Sbjct: 447 VRLWNEMEENGLSPGVD-------------TFVIMINGLASQGCLLEA 481
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 156/390 (40%), Gaps = 78/390 (20%)
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRG---LSPDVDTYYPLICGFCQTGKLGKAF 109
S+ Y ++ + +F G++ +M K + P++ + L+ F + KA
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL--FVVLVQRFASADMVKKAI 203
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
E+ +M G PD +G L+ LC+ G + A LF +M +Y +T L+ +
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRY-FTSLLYGW 262
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
C G+ +A + +M GF PD +V Y + G G++ +A +LR M G
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPD-----IVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 230 LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLI 289
P+ YT +I+ CK+ +A ++ +EM+ +D VTY+ L+
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECE-------------ADVVTYTALV 364
Query: 290 NDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCL 349
+ F G + Y + DD+I GL
Sbjct: 365 SGFCKWGKIDKCYI----------VLDDMIK----KGL---------------------- 388
Query: 350 SIPAYRTY-DTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYN 408
+P+ TY ++ + F+ + L++ KM Y P+ IYN
Sbjct: 389 -MPSELTYMHIMVAHEKKESFEECLELME----------------KMRQIEYHPDIGIYN 431
Query: 409 LLIFDHCRHGNVHKAYDMYKETVHSGVEIG 438
++I C+ G V +A ++ E +G+ G
Sbjct: 432 VVIRLACKLGEVKEAVRLWNEMEENGLSPG 461
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 6/216 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++DK + +L MI +G PS TY ++ + + + F+E + ++ M + PD+ Y
Sbjct: 372 KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYN 431
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
+I C+ G++ +A + +M G+ P DT+ I+I L +G L +A D F EM+
Sbjct: 432 VVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTR 491
Query: 154 GV-SPHKYIYTR-LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCV 211
G+ S +Y + L+N + A D+ + +KG +++ + IH
Sbjct: 492 GLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKG----ACELNVLSWTIWIHALFS 547
Query: 212 LGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKI 247
G +EA M +M P ++ ++KG K+
Sbjct: 548 KGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKL 583
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+P+ + +L V ++++A + M V TY L+ G+C+ + +
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 377
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L DM K+GL P TY ++ + + E+ KM PD Y ++I
Sbjct: 378 IVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLA 437
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL 191
C+ G + +A L+ EM G+SP + ++N +G +A D EM+ +G
Sbjct: 438 CKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF 494
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 185/420 (44%), Gaps = 49/420 (11%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
+A +LK M +G PS+ +YN L+ G C+ +A I+ M + G+ PD TY L+
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
G+C GK+ A + +M+ LP+A T IL+ +L + GR+S+A +L +M +G
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEM------------------INKGFLPDGISPS 198
+++ C GE KA+++ M ++ + + P
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523
Query: 199 LVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKL 258
L+ Y+ ++G C GR EA + M L PD V+Y I FCK G+ AF +
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLK 583
Query: 259 EMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDV 318
+M++KG ++SL TY++LI + + + + L EM E +
Sbjct: 584 DMEKKG------CHKSL-------ETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 319 ISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKD 378
+ I L + +E +L+ Q ++ P ++ LIE V D
Sbjct: 631 TYNTAIQYLC-EGEKVEDATNLLDEMMQKNIA-PNVFSFKYLIEAFCK---------VPD 679
Query: 379 FSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIG 438
F M A + + + + EG +Y+L+ + G + KA ++ + + G E+G
Sbjct: 680 FDM------AQEVFETAVSICGQKEG-LYSLMFNELLAAGQLLKATELLEAVLDRGFELG 732
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 142/338 (42%), Gaps = 67/338 (19%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD +H +V +VD A ++L+ M+ P+ T N L+H + R EA +
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM--------------------- 115
LR M ++G D T ++ G C +G+L KA E+ M
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 116 --VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKG 173
+ LPD TY L+ LC+ GR ++A +LF EM+ E + P Y ++++C +G
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQG 573
Query: 174 EFSKALDLPDEMINKG------------------------------FLPDGISPSLVIYN 203
+ S A + +M KG GISP++ YN
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYN 633
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
I C +VE+A +L M ++P+V S+ +I+ FCK+ + F++ E+ E
Sbjct: 634 TAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPD----FDMAQEVFET 689
Query: 264 GIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDA 301
+ + E YS + N+ A G L+ A
Sbjct: 690 AVSICG----------QKEGLYSLMFNELLAAGQLLKA 717
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 188/423 (44%), Gaps = 47/423 (11%)
Query: 21 NLLSQVHSLLNVYQVDKAHNMLKYMIVRGF----SPSVATYNELIHGYCRADRFKEAVGI 76
+LLS V +DKA ++ +VR PSV YN L+ + R + +
Sbjct: 77 SLLSVVSIFAKSNHIDKAFP--QFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWL 134
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
+DM G++P T+ LI C + + A E+ +M KG P+ T+GIL+ C+
Sbjct: 135 YKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCK 194
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G K +L M GV P+K IY +++ +C +G + + ++M +G +PD
Sbjct: 195 AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPD--- 251
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMAD---MGL-SPDVVSYTNVIKGFCKIGEPVK 252
+V +N+RI C G+V +A I M +GL P+ ++Y ++KGFCK+G
Sbjct: 252 --IVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVG---- 305
Query: 253 AFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYS 312
+ E L+E I ++ DDL+ +Y+ + G ++A + +M++
Sbjct: 306 -------LLEDAKTLFESIREN--DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356
Query: 313 YLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKT 371
++ ++GL K +AK ++V ++ + P TY L+ CS +
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAK-TIVGLMKRNGVC-PDAVTYGCLLHGYCSVGKVDA 414
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETV 431
L+++ M+ N P N+L+ + G + +A ++ ++
Sbjct: 415 AKSLLQE----------------MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 432 HSG 434
G
Sbjct: 459 EKG 461
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 174/410 (42%), Gaps = 66/410 (16%)
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMK 112
S+ +YN + G R +F EA +L+ M +G+ P + +Y L+ G C+ G L A +
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
M G+ PDA TYG L+ C G++ A L EM+R P+ Y L++
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM------- 225
G S+A +L +M KG+ D ++ +++ + G C G +++A+ I++GM
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNII-----VDGLCGSGELDKAIEIVKGMRVHGSAA 499
Query: 226 -ADMGLS---------------PDVVSYTNVIKGFCKIGEPVKAFELKLE-MDEKGIPLY 268
++G S PD+++Y+ ++ G CK G +A L E M EK P
Sbjct: 500 LGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP-- 557
Query: 269 EDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLN 328
D V Y+ I+ F QG + A+ + +M + + I GL
Sbjct: 558 ------------DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605
Query: 329 KKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHK 387
K E L+ + +S P TY+T I+ C + + L+
Sbjct: 606 IKNQIFEI-HGLMDEMKEKGIS-PNICTYNTAIQYLCEGEKVEDATNLL----------- 652
Query: 388 AAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
D+M+ N P + LI C+ + +DM +E + V I
Sbjct: 653 -----DEMMQKNIAPNVFSFKYLIEAFCKVPD----FDMAQEVFETAVSI 693
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 8/240 (3%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P + TY+ L++G C+A RF EA + +M L PD Y I FC+ GK+ AF +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
M KG +TY LIL L K ++ + L EM +G+SP+ Y + Y C
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 172 KGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
+ A +L DEM+ K I+P++ + I C + + A + +
Sbjct: 642 GEKVEDATNLLDEMMQK-----NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQ 696
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL--SDEVTYSTLI 289
+ + Y+ + G+ +KA EL + ++G L +Y+ L++ L DE+ ++ I
Sbjct: 697 KEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGI 755
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 39/271 (14%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + ++ L + +A N+ M+ P YN IH +C+ + A +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L+DM K+G ++TY LI G ++ + + +M KGI P+ TY I LC
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC-------------------------- 170
++ A +L EM+++ ++P+ + + L+ +C
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 171 --------FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGIL 222
G+ KA +L + ++++GF +Y + C +E A GIL
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDRGF-----ELGTFLYKDLVESLCKKDELEVASGIL 756
Query: 223 RGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
M D G D + VI G K+G +A
Sbjct: 757 HKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q+ + H ++ M +G SP++ TYN I C ++ ++A +L +M ++ ++P+V ++
Sbjct: 609 QIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFK 668
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGIL---PDADTYGILILTLCRKGRLSKAFDLFLEM 150
LI FC+ F+M ++ + Y ++ L G+L KA +L +
Sbjct: 669 YLIEAFCKV----PDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAV 724
Query: 151 LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCC 210
L G ++Y L+ C K E A + +MI++G+ G P+ ++ I G
Sbjct: 725 LDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY---GFDPAALM--PVIDGLG 779
Query: 211 VLGRVEEALGILRGMADMGLSPDVVS 236
+G +EA M +M +V +
Sbjct: 780 KMGNKKEANSFADKMMEMASVGEVAN 805
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 5/222 (2%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
S + L ++++A N++K M G + N LI G R R EA LR+M K
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN 493
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
G P V +Y LICG C+ GK G+A +M+ G PD TY IL+ LCR ++ A
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
+L+ + L+ G+ ++ L++ C G+ A+ + M ++ + +LV YN
Sbjct: 554 LELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR-----NCTANLVTYN 608
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFC 245
+ G +G A I M MGL PD++SY ++KG C
Sbjct: 609 TLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 196/479 (40%), Gaps = 81/479 (16%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+P R+ + +++ + Q K ++ Y G +P++ TYN LI C+ F++A G
Sbjct: 111 EPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG 170
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
L M K G PDV +Y +I + GKL A E+ +M +G+ PD Y ILI
Sbjct: 171 FLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230
Query: 136 RKGRLSKAFDLFLEMLREG-VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
++ A +L+ +L + V P+ + +++ G L + + M D
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKD- 289
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
L Y++ IHG C G V++A + + + S DVV+Y ++ GFC+ G+ ++
Sbjct: 290 ----LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESL 345
Query: 255 ELKLEMDEKG---IPLYEDIYQSLLDD------------------LSDEVTYSTLIN--- 290
EL M+ K I Y + + LL++ +D+ TY I+
Sbjct: 346 ELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLC 405
Query: 291 ----------------------DFHAQGNLMDAYCLESEMSEYSYLTDDV---------- 318
D +A +++D C + + E S L ++
Sbjct: 406 VNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSH 465
Query: 319 ISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVK 377
+ + I GL + + EA L C P +Y+ LI C +F VK
Sbjct: 466 VCNALIGGLIRDSRLGEASFFLREMGKNGCR--PTVVSYNILICGLCKAGKFGEASAFVK 523
Query: 378 DFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
+ ML +KP+ Y++L+ CR + A +++ + + SG+E
Sbjct: 524 E----------------MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLE 566
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 40/263 (15%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHG---------------------- 63
+ LL ++D+A + + M +G++ TY IHG
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 64 -------------YCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
C+ R +EA ++++M+K G+ + LI G + +LG+A
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
+M G P +Y ILI LC+ G+ +A EML G P Y+ L+ C
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
+ AL+L + FL G+ ++++N IHG C +G++++A+ ++ M
Sbjct: 546 RDRKIDLALELWHQ-----FLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 231 SPDVVSYTNVIKGFCKIGEPVKA 253
+ ++V+Y +++GF K+G+ +A
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRA 623
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 5/218 (2%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ L+ ++ +A L+ M G P+V +YN LI G C+A +F EA +++M + G
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD+ TY L+CG C+ K+ A E+ + + G+ D + ILI LC G+L A
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
+ M + + Y LM + G+ ++A + M G PD ++ YN
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD-----IISYNTI 645
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
+ G C+ V A+ + G+ P V ++ +++
Sbjct: 646 MKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 154/340 (45%), Gaps = 30/340 (8%)
Query: 25 QVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
V+SL +++A +L I G P V TYN LI GY R EA + R M + G
Sbjct: 19 SVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAG 78
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
+ PDV TY LI G + L + ++ +M+H G+ PD +Y L+ + GR +AF
Sbjct: 79 IEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAF 138
Query: 145 DLFLEMLR-EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
+ E + G+ P Y L++ C G A++L + ++ + P L+ YN
Sbjct: 139 KILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR------VKPELMTYN 192
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
I+G C RV ++R + G +P+ V+YT ++K + K K +L L+M ++
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 264 GIPL-----------------YEDIYQSLLDDL------SDEVTYSTLINDFHAQGNLMD 300
G E+ Y+ + + + D V+Y+TL+N + GNL
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 301 AYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSL 340
L E+ DD ++ +NGL T A++ L
Sbjct: 313 VDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 132/296 (44%), Gaps = 29/296 (9%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
D A + K++ R P + TYN LI+G C++ R ++R++ K G +P+ TY
Sbjct: 169 HTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYT 227
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
++ + +T ++ K ++ KM +G D ++ L + GR +A++ E++R
Sbjct: 228 TMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRS 287
Query: 154 GVSPHKYI-YTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVL 212
G + Y L+N Y G DL +E+ KG PD + ++++ +G +
Sbjct: 288 GTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIV-----NGLLNI 342
Query: 213 GRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIY 272
G A L + +MG+ P VV+ +I G CK G +A L M
Sbjct: 343 GNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM------------ 390
Query: 273 QSLLDDLSDEVTYSTLINDFHAQGNLMDA-----YCLESEMSEYSYLTDDVISSVR 323
++ DE TY++++++ G L+ A C M S V+S +R
Sbjct: 391 -----EVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIR 441
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 140/326 (42%), Gaps = 21/326 (6%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++PD S + +++ + M+ G SP + +YN L+ Y + R EA
Sbjct: 79 IEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAF 138
Query: 75 GIL-RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
IL D+ GL P +DTY L+ C++G A E+ K + + P+ TY ILI
Sbjct: 139 KILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIEL-FKHLKSRVKPELMTYNILING 197
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
LC+ R+ + E+ + G +P+ YT ++ Y K L L +M +G+ D
Sbjct: 198 LCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFD 257
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL-SPDVVSYTNVIKGFCKIGEPVK 252
G + V+ +A I GR EEA + + G S D+VSY ++ + K G
Sbjct: 258 GFANCAVV-SALIK----TGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 253 AFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYS 312
+L E++ KG+ D+ T++ ++N GN A + + E
Sbjct: 313 VDDLLEEIEMKGLK-------------PDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMG 359
Query: 313 YLTDDVISSVRINGLNKKATTIEAKR 338
V + I+GL K A R
Sbjct: 360 MQPSVVTCNCLIDGLCKAGHVDRAMR 385
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 151/395 (38%), Gaps = 73/395 (18%)
Query: 46 IVRGFS--PSVAT--YNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQ 101
+VRG P ++T N ++ C+ + A +L D + G+ PDV TY LI G+ +
Sbjct: 1 MVRGLMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTR 60
Query: 102 TGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYI 161
+ +A+ + +M GI PD TY LI + L++ LF EML G+SP +
Sbjct: 61 FIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWS 120
Query: 162 YTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGI 221
Y LM+ Y G +A + E I+ G+ P + YN + C G + A+ +
Sbjct: 121 YNTLMSCYFKLGRHGEAFKILHEDIHLA----GLVPGIDTYNILLDALCKSGHTDNAIEL 176
Query: 222 LRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD 281
+ + + P++++Y +I G CK + E+ + G +
Sbjct: 177 FKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYT-------------PN 222
Query: 282 EVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLV 341
VTY+T++ + + L +M + Y D + ++ L K EA
Sbjct: 223 AVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEA----- 277
Query: 342 RWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYK 401
+C+ H+ + G
Sbjct: 278 ----YECM------------------------------------------HELVRSGTRS 291
Query: 402 PEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
+ YN L+ + + GN+ D+ +E G++
Sbjct: 292 QDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLK 326
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGF-SPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
V +L+ + ++A+ + ++ G S + +YN L++ Y + +L ++ +G
Sbjct: 265 VSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKG 324
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
L PD T+ ++ G G G A + A + G+ P T LI LC+ G + +A
Sbjct: 325 LKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAM 384
Query: 145 DLFLEM-LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
LF M +R+ ++ YT +++ C G A L NKG
Sbjct: 385 RLFASMEVRD-----EFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 177/417 (42%), Gaps = 62/417 (14%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
SP++ T+ L+ G + R +A + DM RG+SP+ TY LI G CQ G A +
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARK 254
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
+ +M G PD+ + L+ C+ GR+ +AF+L ++G Y+ L++
Sbjct: 255 LFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLF 314
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
+++A +L M+ K I P +++Y I G G++E+AL +L M G+
Sbjct: 315 RARRYTQAFELYANMLKK-----NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIN 290
SPD Y VIK C G + L+LEM E + D T++ LI
Sbjct: 370 SPDTYCYNAVIKALCGRGLLEEGRSLQLEMSET-------------ESFPDACTHTILIC 416
Query: 291 DFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSL--------VR 342
G + +A + +E+ + + I+GL K EA+ L
Sbjct: 417 SMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPAS 476
Query: 343 WFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKP 402
F + LS R++DT++E+ S ++K + R LAH A P
Sbjct: 477 LFLR--LSHSGNRSFDTMVESGS---------ILKAY--RDLAHFADTGSS--------P 515
Query: 403 EGAIYNLLIFDHCRHGNVHKAYDM---------------YKETVHSGVEIGRAEPSF 444
+ YN+LI CR G++ A + Y ++ +GR E +F
Sbjct: 516 DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAF 572
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)
Query: 20 RNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRD 79
R S + L + +A + M+ + P + Y LI G +A + ++A+ +L
Sbjct: 304 RGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSS 363
Query: 80 MAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
M +G+SPD Y +I C G L + ++ +M PDA T+ ILI ++CR G
Sbjct: 364 MPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLP----------------- 182
+ +A ++F E+ + G SP + L++ C GE +A L
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSH 483
Query: 183 ------DEMINKG-----------FLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM 225
D M+ G F G SP +V YN I+G C G ++ AL +L +
Sbjct: 484 SGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVL 543
Query: 226 ADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
GLSPD V+Y +I G ++G +AF+L
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 178/414 (42%), Gaps = 38/414 (9%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+ A M M RG SP+ TY LI G C+ +A + +M G PD +
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ GFC+ G++ +AFE+ G + Y LI L R R ++AF+L+ ML++
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
+ P +YT L+ G+ AL L M +K GISP YNA I C G
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK-----GISPDTYCYNAVIKALCGRG 387
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
+EE + M++ PD ++T +I C+ G +A E+ E+++ G +
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFN 447
Query: 274 SLLDDL--SDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKA 331
+L+D L S E+ + L+ G + S S+ D ++ S
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSF--DTMVES---------G 496
Query: 332 TTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLA----- 385
+ ++A R L + D S P +Y+ LI C + + L+ ++GL+
Sbjct: 497 SILKAYRDLAH--FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVT 554
Query: 386 --------HKAAKAHD--KMLHG--NYKPEGAIYNLLIFDHCRHGNVHKAYDMY 427
H+ + + K+ + +++ A+Y L+ CR V A++++
Sbjct: 555 YNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLW 608
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 156/359 (43%), Gaps = 36/359 (10%)
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L ++ G+S D + LI + + G KA E +M PD TY +++ + R
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 137 KGRLSK-AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
+ AF ++ EML+ SP+ Y + LM+ KG S A + D+M + GI
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGR-----GI 229
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
SP+ V Y I G C G ++A + M G PD V++ ++ GFCK+G V+AFE
Sbjct: 230 SPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFE 289
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLT 315
L ++ G L Y SL+D L Y+ A+ L + M + +
Sbjct: 290 LLRLFEKDGFVLGLRGYSSLIDGLFRARRYT-------------QAFELYANMLKKNIKP 336
Query: 316 DDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGL 375
D ++ ++ I GL+ KA IE L+ +S Y C N K + G
Sbjct: 337 DIILYTILIQGLS-KAGKIEDALKLLSSMPSKGISPDTY---------CYNAVIKALCG- 385
Query: 376 VKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
RGL + +M P+ + +LI CR+G V +A +++ E SG
Sbjct: 386 ------RGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 129/339 (38%), Gaps = 74/339 (21%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM-------------- 80
V +A + + G SPSVAT+N LI G C++ KEA +L M
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSH 483
Query: 81 -------------------------AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM 115
A G SPD+ +Y LI GFC+ G + A ++ +
Sbjct: 484 SGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVL 543
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
KG+ PD+ TY LI L R GR +AF LF ++ +Y LM + C K +
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFRHSPAVYRSLMTWSCRKRKV 601
Query: 176 SKALDL-----------PDEMINK--GFLPDGISP----------------SLVIYNARI 206
A +L DE N+ +G + +L Y +
Sbjct: 602 LVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWL 661
Query: 207 HGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCK---IGEPVKAFELKLEMDEK 263
G C GR EAL + + + + S +I G CK + ++ F L+ + K
Sbjct: 662 IGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFK 721
Query: 264 GIP-LYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDA 301
+P + + SLL+ S L N G +D+
Sbjct: 722 LMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGYNVDS 760
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 18/320 (5%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + L + + + + +K M + + R F P +Y+ LIHG +A E +
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
M ++G D Y +I GFC+ GK+ KA+++ +M KG P TYG +I L +
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
RL +A+ LF E + + + IY+ L++ + G +A + +E++ K G++
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-----GLT 689
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P+L +N+ + + EAL + M ++ +P+ V+Y +I G CK+ + KAF
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
EM ++G+ ++Y+T+I+ GN+ +A L + D
Sbjct: 750 WQEMQKQGMK-------------PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 317 DVISSVRINGLNKKATTIEA 336
+ I GL+ ++A
Sbjct: 797 SACYNAMIEGLSNGNRAMDA 816
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 168/394 (42%), Gaps = 30/394 (7%)
Query: 14 ILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEA 73
+ PDE S + L V +VD A+ + + M+ + Y LI + R ++
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 74 VGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
I +DM + SPD+ + + G+ K M ++ + +PDA +Y ILI
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
L + G ++ ++LF M +G Y +++ +C G+ +KA L +EM KGF
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF--- 618
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
P++V Y + I G + R++EA + + +VV Y+++I GF K+G +A
Sbjct: 619 --EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDL----------------------SDEVTYSTLIND 291
+ + E+ +KG+ + SLLD L ++VTY LIN
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Query: 292 FHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSI 351
A+ EM + + + I+GL K EA R ++ +
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR--FKANGGV 794
Query: 352 PAYRTYDTLIENCSN-NEFKTVVGLVKDFSMRGL 384
P Y+ +IE SN N L ++ RGL
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 7/269 (2%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
+ +LD N++ + +V+KA+ +L+ M +GF P+V TY +I G + DR
Sbjct: 581 QGCVLDTRAYNIV--IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
EA + + + + +V Y LI GF + G++ +A+ + +++ KG+ P+ T+ L
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
+ L + +++A F M +P++ Y L+N C +F+KA EM +
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ-- 756
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEP 250
G+ PS + Y I G G + EA + G PD Y +I+G
Sbjct: 757 ---GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 251 VKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
+ AF L E +G+P++ LLD L
Sbjct: 814 MDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 174/413 (42%), Gaps = 40/413 (9%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ S V +VD A + G P TY +I C+A+R EAV + + K
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P Y +I G+ GK +A+ + + KG +P Y ++ L + G++ +A
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
+F EM ++ +P+ Y L++ C G+ A +L D M G P+ + N
Sbjct: 365 VFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN-----VRTVNIM 418
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
+ C +++EA + M +PD +++ ++I G K+G A++
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK---------- 468
Query: 266 PLYEDIYQSLLDD--LSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVR 323
+Y+ +LD ++ + Y++LI +F G D + + +M + D + +
Sbjct: 469 -----VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 324 INGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRG 383
++ + KA E R++ +P R+Y LI GL+K G
Sbjct: 524 MDCMF-KAGEPEKGRAMFEEIKARRF-VPDARSYSILIH-----------GLIK----AG 566
Query: 384 LAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
A++ + M + YN++I C+ G V+KAY + +E G E
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 176/446 (39%), Gaps = 49/446 (10%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++D A + M G P+V T N ++ C++ + EA + +M + +PD T+
Sbjct: 392 KLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G + G++ A+++ KM+ ++ Y LI GR ++ +M+ +
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
SP + M+ GE K + +E+ + F+PD S S++ IHG G
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL-----IHGLIKAG 566
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
E + M + G D +Y VI GFCK G+ KA++L EM KG Y
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 274 SLLDDLS-----DE-----------------VTYSTLINDFHAQGNLMDAYCLESEMSEY 311
S++D L+ DE V YS+LI+ F G + +AY + E+ +
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 312 SYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFK 370
+ + ++ L K EA C P TY LI C +F
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC--TPNQVTYGILINGLCKVRKFN 744
Query: 371 TVVGLVKDFS--------------MRGLAHKAAKAHDKMLHGNYK-----PEGAIYNLLI 411
++ + GLA A L +K P+ A YN +I
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 412 FDHCRHGNVHKAYDMYKETVHSGVEI 437
A+ +++ET G+ I
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPI 830
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 177/424 (41%), Gaps = 38/424 (8%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PDE S + L ++D+A M +++ P YN +I GY A +F EA
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L +G P V Y ++ + GK+ +A ++ +M K P+ TY ILI L
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDML 387
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
CR G+L AF+L M + G+ P+ +++ C + +A + +EM K PD
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
I+ + + I G +GRV++A + M D + + YT++IK F G
Sbjct: 448 IT-----FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK---- 498
Query: 255 ELKLEMDEKGIPLYED-IYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
E G +Y+D I Q+ DL +T ++ G + E+ +
Sbjct: 499 -------EDGHKIYKDMINQNCSPDLQ---LLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 314 LTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVV 373
+ D S+ I+GL K E Q C + R Y+ +I+
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGC--VLDTRAYNIVIDG---------- 596
Query: 374 GLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHS 433
F G +KA + ++M ++P Y +I + + +AY +++E
Sbjct: 597 -----FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 434 GVEI 437
+E+
Sbjct: 652 RIEL 655
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 168/432 (38%), Gaps = 74/432 (17%)
Query: 56 TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM 115
+YN L+ R F IL +M+ G P V+T ++ G + KL + +++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
P Y LI LF +M G P +++T L+ + +G
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
AL L DEM + D +V+YN I +G+V+ A + GL PD V
Sbjct: 220 DSALSLLDEMKSSSLDAD-----IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 236 SYTNVIKGFCK---IGEPVKAFELKLEMDEKGIPL----------------YEDIYQSLL 276
+YT++I CK + E V+ FE LE + + +P +++ Y SLL
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFE-HLEKNRR-VPCTYAYNTMIMGYGSAGKFDEAY-SLL 331
Query: 277 D------DLSDEVTYSTLINDFHAQGNLMDAYCLESEM--------SEYSYLTDDVISSV 322
+ + + Y+ ++ G + +A + EM S Y+ L D + +
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAG 391
Query: 323 RINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN------------------- 363
+++ T E + S+ Q P RT + +++
Sbjct: 392 KLD------TAFELRDSM-----QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 364 --CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVH 421
C+ +E T L+ G A K ++KML + + +Y LI + HG
Sbjct: 441 KVCTPDEI-TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 422 KAYDMYKETVHS 433
+ +YK+ ++
Sbjct: 500 DGHKIYKDMINQ 511
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 22/344 (6%)
Query: 20 RNLLSQVHSLLNVYQVDKAHNMLKYMIVR-GFSPSVATYNELIHGYCRADRFKEAVGILR 78
R+L + ++ L+ + D H M K G +P++ T N L+ C+ + + A +L
Sbjct: 156 RSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLD 215
Query: 79 DMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKG 138
++ GL P++ TY ++ G+ G + A + +M+ +G PDA TY +L+ C+ G
Sbjct: 216 EIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLG 275
Query: 139 RLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPS 198
R S+A + +M + + P++ Y ++ C + + +A ++ DEM+ + F+PD
Sbjct: 276 RFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCC 335
Query: 199 LVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKL 258
V I C +V+EA G+ R M PD + +I CK G +A +L
Sbjct: 336 KV-----IDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFD 390
Query: 259 EMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDV 318
E ++ IP SLL TY+TLI +G L +A L +M E +
Sbjct: 391 EFEKGSIP-------SLL-------TYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAF 436
Query: 319 ISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIE 362
+V I GL+K E R L C P T+ L E
Sbjct: 437 TYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF--PNKTTFLILFE 478
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 139/309 (44%), Gaps = 21/309 (6%)
Query: 21 NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM 80
NLL V +L ++ A+ +L + G P++ TY ++ GY + A +L +M
Sbjct: 195 NLL--VKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252
Query: 81 AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRL 140
RG PD TY L+ G+C+ G+ +A + M I P+ TYG++I LC++ +
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 141 SKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
+A ++F EML P + ++++ C + +A L +M+ +PD
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN-----A 367
Query: 201 IYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM 260
+ + IH C GRV EA + + G P +++Y +I G C+ GE +A
Sbjct: 368 LLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGR----- 421
Query: 261 DEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVIS 320
L++D+Y+ + TY+ LI GN+ + + EM E +
Sbjct: 422 ------LWDDMYERKCK--PNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTF 473
Query: 321 SVRINGLNK 329
+ GL K
Sbjct: 474 LILFEGLQK 482
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 41/257 (15%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
++ A +L+ M+ RG+ P TY L+ GYC+ RF EA ++ DM K + P+ TY
Sbjct: 242 MESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGV 301
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADT---------------------------- 126
+I C+ K G+A M +M+ + +PD+
Sbjct: 302 MIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNN 361
Query: 127 -------YGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKAL 179
LI LC++GR+++A LF E +G P Y L+ C KGE ++A
Sbjct: 362 CMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAG 420
Query: 180 DLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTN 239
L D+M + P+ + YN I G G V+E + +L M ++G P+ ++
Sbjct: 421 RLWDDMYERKCKPNAFT-----YNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLI 475
Query: 240 VIKGFCKIGEPVKAFEL 256
+ +G K+G+ A ++
Sbjct: 476 LFEGLQKLGKEEDAMKI 492
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 163/377 (43%), Gaps = 37/377 (9%)
Query: 59 ELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM-KAKMVH 117
+L+ Y A R++ ++ I + G+ V + L+ Q + M K
Sbjct: 125 DLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKES 184
Query: 118 KGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSK 177
GI P+ T +L+ LC+K + A+ + E+ G+ P+ YT ++ Y +G+
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 178 ALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSY 237
A + +EM+++G+ PD + Y + G C LGR EA ++ M + P+ V+Y
Sbjct: 245 AKRVLEEMLDRGWYPDATT-----YTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTY 299
Query: 238 TNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGN 297
+I+ CK + +A + EM E+ + D +I+
Sbjct: 300 GVMIRALCKEKKSGEARNMFDEMLERSF-------------MPDSSLCCKVIDALCEDHK 346
Query: 298 LMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTY 357
+ +A L +M + + + D+ + S I+ L K+ EA R L F + SIP+ TY
Sbjct: 347 VDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA-RKLFDEFEKG--SIPSLLTY 403
Query: 358 DTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRH 417
+TLI G+ + +G +A + D M KP YN+LI ++
Sbjct: 404 NTLI-----------AGMCE----KGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKN 448
Query: 418 GNVHKAYDMYKETVHSG 434
GNV + + +E + G
Sbjct: 449 GNVKEGVRVLEEMLEIG 465
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 19/259 (7%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++P+E + +L + +A NM M+ R F P + ++I C + EA
Sbjct: 292 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEAC 351
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
G+ R M K PD LI C+ G++ +A ++ + KG +P TY LI +
Sbjct: 352 GLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGM 410
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C KG L++A L+ +M P+ + Y L+ G + + + +EM+ G P+
Sbjct: 411 CEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNK 470
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ L+++ G LG+ E+A+ I+ MA M D S+ +K F
Sbjct: 471 TT-FLILF----EGLQKLGKEEDAMKIV-SMAVMNGKVDKESWELFLKKFAG-------- 516
Query: 255 ELKLEMDEKGIPLYEDIYQ 273
E+D+ +PL E +++
Sbjct: 517 ----ELDKGVLPLKELLHE 531
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 5/219 (2%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A N+ M +G P+V TYN +I +C + R+ +A +LR M ++ ++PD+ T+ LI
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
F + K+ +A E+ +M+ I P TY +I C++ R+ A + M +G SP
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
++ L+N YC +++ EM + GI + V Y IHG C +G ++
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRR-----GIVANTVTYTTLIHGFCQVGDLDA 203
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
A +L M G++PD +++ ++ G C E KAF +
Sbjct: 204 AQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 18/251 (7%)
Query: 80 MAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
M + + DV ++ C+ G A + +M KGI P+ TY +I + C GR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
S A L M+ + ++P ++ L+N + + + S+A E I K L I P+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEA-----EEIYKEMLRWSIFPTT 115
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
+ YN+ I G C RV++A +L MA G SPDVV+++ +I G+CK E+ E
Sbjct: 116 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 175
Query: 260 MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
M +GI +++ VTY+TLI+ F G+L A L +EM D +
Sbjct: 176 MHRRGI-------------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 222
Query: 320 SSVRINGLNKK 330
+ GL K
Sbjct: 223 FHCMLAGLCSK 233
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A +L++MI + +P + T++ LI+ + + + EA I ++M + + P TY +I
Sbjct: 64 ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMID 123
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
GFC+ ++ A M M KG PD T+ LI C+ R+ ++F EM R G+
Sbjct: 124 GFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA 183
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+ YT L++ +C G+ A DL +EMI+ G PD I+ ++ + G C + +
Sbjct: 184 NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT-----FHCMLAGLCSKKELRK 238
Query: 218 ALGILRGM 225
A IL +
Sbjct: 239 AFAILEDL 246
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 5/213 (2%)
Query: 54 VATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKA 113
V ++ C+ A + +M ++G+ P+V TY +I FC +G+ A ++
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 114 KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKG 173
M+ K I PD T+ LI ++ ++S+A +++ EMLR + P Y +++ +C +
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 174 EFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPD 233
A + D M +K G SP +V ++ I+G C RV+ + I M G+ +
Sbjct: 130 RVDDAKRMLDSMASK-----GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 234 VVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIP 266
V+YT +I GFC++G+ A +L EM G+
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 217
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++PD + +++ + +V +A + K M+ P+ TYN +I G+C+ DR +A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L MA +G SPDV T+ LI G+C+ ++ E+ +M +GI+ + TY LI
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEM 185
C+ G L A DL EM+ GV+P + ++ C K E KA + +++
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 92/242 (38%), Gaps = 32/242 (13%)
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
I +VI A + C G A + M + G+ P+V++Y +I FC G A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
+L M EK I D VT+S LIN F + + +A + EM +S
Sbjct: 66 QLLRHMIEKQIN-------------PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIF 112
Query: 315 TDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVV 373
+ + I+G K+ +AKR L + C P T+ TLI C +
Sbjct: 113 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS--PDVVTFSTLINGYCKAKRVDNGM 170
Query: 374 GLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHS 433
+ + RG+ Y LI C+ G++ A D+ E +
Sbjct: 171 EIFCEMHRRGIV----------------ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISC 214
Query: 434 GV 435
GV
Sbjct: 215 GV 216
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 175/404 (43%), Gaps = 76/404 (18%)
Query: 41 MLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFC 100
MLK M + G P + T + L++G+C ++ K+AV + M K G+ DV LI C
Sbjct: 1 MLKMMKL-GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLC 59
Query: 101 QTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKY 160
+ + A E+ +M +GI P+ TY LI LC+ GRL+ A EM + ++P+
Sbjct: 60 KNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVI 119
Query: 161 IYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALG 220
++ L++ Y +G+ SK + + K + I P++ Y++ I+G C+ RV+EA+
Sbjct: 120 TFSALIDAYAKRGKLSKV-----DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIK 174
Query: 221 ILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS 280
+L M G +P+VV+Y+ + GF K +L +M ++G+ +
Sbjct: 175 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVA-------------A 221
Query: 281 DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSL 340
+ V+ +TLI + G ++ + + Y+T NGL
Sbjct: 222 NTVSCNTLIKGYFQAGK------IDLALGVFGYMTS--------NGL------------- 254
Query: 341 VRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNY 400
IP R+Y+ ++ N G KA + M
Sbjct: 255 ----------IPNIRSYNIVLAGLFAN---------------GEVEKALSRFEHMQKTRN 289
Query: 401 KPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPSF 444
+ Y ++I C+ V +AYD++ + ++ R EP F
Sbjct: 290 DLDIITYTIMIHGMCKACMVKEAYDLFYK-----LKFKRVEPDF 328
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 143/309 (46%), Gaps = 20/309 (6%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A +LK M RG SP+V TY+ LI G C++ R +A L +M + ++P+V T+ LI
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
+ + GKL K + M+ I P+ TY LI LC R+ +A + M+ +G +P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+ Y+ L N + + L D+M +G + +S N I G G+++
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVS-----CNTLIKGYFQAGKIDL 241
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
ALG+ M GL P++ SY V+ G GE EK + +E + Q +
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV-----------EKALSRFEHM-QKTRN 289
Query: 278 DLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAK 337
DL D +TY+ +I+ + +AY L ++ D ++ I LN+ EA
Sbjct: 290 DL-DIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA- 347
Query: 338 RSLVRWFYQ 346
+ FYQ
Sbjct: 348 -DALNRFYQ 355
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DP+ S ++ L +VD+A ML MI +G +P+V TY+ L +G+ ++ R + +
Sbjct: 149 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 208
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L DM +RG++ + + LI G+ Q GK+ A + M G++P+ +Y I++ L
Sbjct: 209 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 268
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
G + KA F M + YT +++ C +A DL ++ K PD
Sbjct: 269 FANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPD 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++D A + YM G P++ +YN ++ G ++A+ M K D+ TY
Sbjct: 238 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYT 297
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
+I G C+ + +A+++ K+ K + PD Y I+I L R G ++A
Sbjct: 298 IMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 188/466 (40%), Gaps = 62/466 (13%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+V++A + + M +G +P V Y LI G C + +A ++ +M G +PD+ Y
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML-- 151
L G G +AFE M ++G+ P T+ ++I L G L KA + F E L
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA-EAFYESLEH 529
Query: 152 --RE------------GVSPH-------------KYIYTRLMNYYCFKGEF-SKALDLPD 183
RE G H K +Y L C + ++ SKA DL D
Sbjct: 530 KSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLD 589
Query: 184 EMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
M G + P +Y I C + V +A + + PD+ +YT +I
Sbjct: 590 RMWKLG-----VEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINT 644
Query: 244 FCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL---------------DDLSDEVTYSTL 288
+C++ EP +A+ L +M + + Y LL D + D V Y+ +
Sbjct: 645 YCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIM 704
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAK----------- 337
IN + +L Y L +M + D V +V + ++ + E K
Sbjct: 705 INRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYY 764
Query: 338 RSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLH 397
L+ W + A R +D +IE+ + + L+ G +A D+M+
Sbjct: 765 TVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIE 824
Query: 398 GNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPS 443
KP+ Y LI CR+G V KA + KE + G++ +A S
Sbjct: 825 SGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 127/279 (45%), Gaps = 40/279 (14%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++P++ + + V V KA + ++ + P + TY +I+ YCR + K+A
Sbjct: 596 VEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAY 655
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ DM +R + PDV TY L+ +MK +M ++PD Y I+I
Sbjct: 656 ALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRY 708
Query: 135 CRKGRLSKAFDLFLEMLRE----------------------------GVSPHKYIYTRLM 166
C L K + LF +M R V P + YT L+
Sbjct: 709 CHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLI 768
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA 226
++ C G+ +A + D+MI G PD +P Y A I CC +G ++EA I M
Sbjct: 769 DWQCKIGDLGEAKRIFDQMIESGVDPDA-AP----YTALIACCCKMGYLKEAKMIFDRMI 823
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
+ G+ PDVV YT +I G C+ G +KA +L EM EKGI
Sbjct: 824 ESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 175/440 (39%), Gaps = 40/440 (9%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
LD D + V +L ++ +L +++ Y I G C A
Sbjct: 213 LDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAY 272
Query: 75 GILRDMAKRGLSPDVD----TYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
+L+ + + D Y ++ G C ++ A + M GI PD Y +
Sbjct: 273 FLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAI 332
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
I + + KA D+F +ML++ + I + ++ YC G FS+A DL E F
Sbjct: 333 IEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKE-----F 387
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEP 250
IS V YN LG+VEEA+ + R M G++PDV++YT +I G C G+
Sbjct: 388 RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKC 447
Query: 251 VKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAY----CLES 306
AF+L +EMD G D V Y+ L G +A+ +E+
Sbjct: 448 SDAFDLMIEMDGTG-------------KTPDIVIYNVLAGGLATNGLAQEAFETLKMMEN 494
Query: 307 EMSEYSYLTDDVISSVRING--LNKKATTIEA--------KRSLVRWF-YQDCLSIPAYR 355
+ +Y+T +++ I+ L+K E+ S+V+ F CL R
Sbjct: 495 RGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFER 554
Query: 356 TYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHC 415
+ F L + + KA D+M +PE ++Y LI C
Sbjct: 555 FIRLEFPLPKSVYFTLFTSLCAE---KDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWC 611
Query: 416 RHGNVHKAYDMYKETVHSGV 435
R NV KA + ++ V +
Sbjct: 612 RVNNVRKAREFFEILVTKKI 631
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 173/431 (40%), Gaps = 45/431 (10%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DPD + + + KA ++ M+ + + + ++ YC+ F EA
Sbjct: 322 IDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAY 381
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ ++ + +S D Y + GK+ +A E+ +M KGI PD Y LI
Sbjct: 382 DLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGC 441
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C +G+ S AFDL +EM G +P IY L G +A + M N+ G
Sbjct: 442 CLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENR-----G 496
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ P+ V +N I G G +++A + D +++KGFC G AF
Sbjct: 497 VKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVKGFCAAGCLDHAF 552
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
E + ++ PL + +Y +L L E Y + D + M +E E S Y L
Sbjct: 553 ERFIRLE---FPLPKSVYFTLFTSLCAEKDYISKAQDLLDR---MWKLGVEPEKSMYGKL 606
Query: 315 TDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLS---IPAYRTYDTLIEN-CSNNEFK 370
+ + R+N + K R F++ ++ +P TY +I C NE K
Sbjct: 607 ---IGAWCRVNNVRK-----------AREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 371 TVVGLVKDFSMRGL------------AHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHG 418
L +D R + + +M + P+ Y ++I +C
Sbjct: 653 QAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLN 712
Query: 419 NVHKAYDMYKE 429
++ K Y ++K+
Sbjct: 713 DLKKVYALFKD 723
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 113/247 (45%), Gaps = 21/247 (8%)
Query: 1 MMITASCKNNK-----AVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVA 55
+MI C+ N+ A+ D R++ V + + D +M + M P V
Sbjct: 640 IMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVV 699
Query: 56 TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQT--GKLGKAFEMKA 113
Y +I+ YC + K+ + +DM +R + PDV TY L+ + + KAF++K
Sbjct: 700 YYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVK- 758
Query: 114 KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKG 173
PD Y +LI C+ G L +A +F +M+ GV P YT L+ C G
Sbjct: 759 --------PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 174 EFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPD 233
+A + D MI G + P +V Y A I GCC G V +A+ +++ M + G+ P
Sbjct: 811 YLKEAKMIFDRMIESG-----VKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Query: 234 VVSYTNV 240
S + V
Sbjct: 866 KASLSAV 872
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 144/400 (36%), Gaps = 41/400 (10%)
Query: 60 LIHGYCRADRFKEAVGIL-RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK 118
L+ Y D F EA+ I R G +PD+ LI +G+ ++
Sbjct: 152 LVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERL 211
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
G+ DA TY +++ L R + L +L Y + C A
Sbjct: 212 GLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIA 271
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYT 238
L + + L D S + Y + G C R+E+A ++ M G+ PDV Y+
Sbjct: 272 YFLLQPLRDANILVDK-SDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYS 330
Query: 239 NVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS--DEVTYSTLINDFHAQG 296
+I+G K IP D++ +L + V S+++ + G
Sbjct: 331 AIIEGHRK---------------NMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMG 375
Query: 297 NLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRT 356
N +AY L E E + D V +V + L K EA L R ++ P
Sbjct: 376 NFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAI-ELFREMTGKGIA-PDVIN 433
Query: 357 YDTLIENC-----SNNEFKTVVG---------------LVKDFSMRGLAHKAAKAHDKML 396
Y TLI C ++ F ++ L + GLA +A + M
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 397 HGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
+ KP +N++I G + KA Y+ H E
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRE 533
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 5/273 (1%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D + + +L + V + + +LK + +G P Y +LI G+C + +L
Sbjct: 212 DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVL 271
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
M P + Y +I G C K +A+ + + KG PD Y +I C K
Sbjct: 272 HTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEK 331
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
G L A L+ EM+++G+ P+++ Y +++ + +GE S +EM+ G+
Sbjct: 332 GWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGY-----GG 386
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELK 257
+++ N I G C G+ +EA I + M++ G++P+ ++Y +IKGFCK + K +L
Sbjct: 387 TMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLY 446
Query: 258 LEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIN 290
E+ G+ Y +L+ +L + +T +N
Sbjct: 447 KELKALGLKPSGMAYAALVRNLKMSDSVATSLN 479
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 157/393 (39%), Gaps = 72/393 (18%)
Query: 44 YMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTG 103
++ GF P + + +EA+ + + G+S V T ++ G +
Sbjct: 135 FLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKAR 194
Query: 104 KLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYT 163
KL + +E+ +MV D++ LI LC G +S+ ++L + L++G+ P +Y+Y
Sbjct: 195 KLDRFWELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYA 252
Query: 164 RLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILR 223
+L++ +C G ++ ++ MI PS+ IY I G C+ + EA I +
Sbjct: 253 KLISGFCEIGNYACMSEVLHTMIAWNHF-----PSMYIYQKIIKGLCMNKKQLEAYCIFK 307
Query: 224 GMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEV 283
+ D G +PD V YT +I+GFC+ G A +L EM +KG+ +E
Sbjct: 308 NLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMR-------------PNEF 354
Query: 284 TYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRW 343
Y+ +I+ +G + SLV
Sbjct: 355 AYNVMIHGHFKRGEI----------------------------------------SLVEA 374
Query: 344 FYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPE 403
FY + L Y + +C+ ++K F G + +A + M P
Sbjct: 375 FYNEMLR----NGYGGTMLSCNT--------MIKGFCSHGKSDEAFEIFKNMSETGVTPN 422
Query: 404 GAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
YN LI C+ V K +YKE G++
Sbjct: 423 AITYNALIKGFCKENKVEKGLKLYKELKALGLK 455
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 73/174 (41%)
Query: 8 KNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRA 67
KN K PD + + + A + MI +G P+ YN +IHG+ +
Sbjct: 307 KNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKR 366
Query: 68 DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTY 127
+M + G + + +I GFC GK +AFE+ M G+ P+A TY
Sbjct: 367 GEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITY 426
Query: 128 GILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDL 181
LI C++ ++ K L+ E+ G+ P Y L+ + +L+L
Sbjct: 427 NALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 5/212 (2%)
Query: 32 VYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDT 91
+ + KA +LK M+ RG +P++ TYN ++ G+ RA + + A +M KR DV T
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 92 YYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML 151
Y ++ GF G++ +A + +M+ +G+LP TY +I LC+K + A +F EM+
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 152 REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCV 211
R G P+ Y L+ GEFS+ +L M N +G P+ YN I
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN-----EGCEPNFQTYNMMIRYYSE 382
Query: 212 LGRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
VE+ALG+ M P++ +Y +I G
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 6/229 (2%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
DKA + M G +A++N ++ C++ R ++A + R + R S D TY +
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVI 201
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
+ G+C + KA E+ +MV +GI P+ TY ++ R G++ A++ FLEM +
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 261
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRV 215
YT +++ + GE +A ++ DEMI +G L PS+ YNA I C V
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL-----PSVATYNAMIQVLCKKDNV 316
Query: 216 EEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
E A+ + M G P+V +Y +I+G GE + EL M+ +G
Sbjct: 317 ENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 124/238 (52%), Gaps = 10/238 (4%)
Query: 23 LSQVHSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILR 78
L+ +++L+V +V+KA+ + + + R FS TYN +++G+C R +A+ +L+
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLK 219
Query: 79 DMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKG 138
+M +RG++P++ TY ++ GF + G++ A+E +M + D TY ++ G
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 139 RLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPS 198
+ +A ++F EM+REGV P Y ++ C K A+ + +EM+ +G+ P+
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY-----EPN 334
Query: 199 LVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
+ YN I G G +++ M + G P+ +Y +I+ + + E KA L
Sbjct: 335 VTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 136/340 (40%), Gaps = 42/340 (12%)
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
++ M + P T+ + + GK KA ++ M G D ++ ++ L
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C+ R+ KA++LF LR S Y ++N +C KAL++ EM+ + G
Sbjct: 172 CKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER-----G 225
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
I+P+L YN + G G++ A M DVV+YT V+ GF GE +A
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
+ EM +G+ L TY+ +I + N+ +A + EM Y
Sbjct: 286 NVFDEMIREGV-------------LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYE 332
Query: 315 TDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIE---NCSNNEFKT 371
+ +V I GL + + R + C P ++TY+ +I CS E
Sbjct: 333 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE--PNFQTYNMMIRYYSECSEVE--- 387
Query: 372 VVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLI 411
KA +KM G+ P YN+LI
Sbjct: 388 ---------------KALGLFEKMGSGDCLPNLDTYNILI 412
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 5/203 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++P+ + + Q+ A M R V TY ++HG+ A K A
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ +M + G+ P V TY +I C+ + A M +MV +G P+ TY +LI L
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
G S+ +L M EG P+ Y ++ YY E KAL L ++M + LP+
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPN- 404
Query: 195 ISPSLVIYNARIHGCCVLGRVEE 217
L YN I G V R E+
Sbjct: 405 ----LDTYNILISGMFVRKRSED 423
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 120/318 (37%), Gaps = 73/318 (22%)
Query: 120 ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKAL 179
I P T+ I+ G+ KA LFL M G + +++ C KA
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 180 DLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTN 239
+L + + S V YN ++G C++ R +AL +L+ M + G++P++ +Y
Sbjct: 182 ELFRALRGR------FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 240 VIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLM 299
++KGF + G+ A+E LEM ++ + D VTY+T+++ F G +
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEI-------------DVVTYTTVVHGFGVAGEIK 282
Query: 300 DAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDT 359
A + EM L P+ TY+
Sbjct: 283 RARNVFDEMIREGVL-------------------------------------PSVATYNA 305
Query: 360 LIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHG 418
+I+ C + + V + ++ RG Y+P YN+LI G
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRG----------------YEPNVTTYNVLIRGLFHAG 349
Query: 419 NVHKAYDMYKETVHSGVE 436
+ ++ + + G E
Sbjct: 350 EFSRGEELMQRMENEGCE 367
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 162/409 (39%), Gaps = 70/409 (17%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
V L + Q+DKA +L+ M++ G P TYN +I C+ + A+ +L DM+ G
Sbjct: 146 VRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGS 205
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PDV TY +I G +A + G P TY +L+ +CR ++A +
Sbjct: 206 PPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE 265
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
+ +M EG P Y L+NY C +G + + + L G+ + V YN
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVAS-----VIQHILSHGLELNTVTYNTL 320
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
+H C +E IL M P V++Y +I G CK +A +
Sbjct: 321 LHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDF--------- 371
Query: 266 PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRIN 325
Y+ + Q L D+ VTY+T++ +G + DD I
Sbjct: 372 -FYQMLEQKCLPDI---VTYNTVLGAMSKEG-----------------MVDDAI------ 404
Query: 326 GLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLA 385
L+ C P TY+++I+ GL K +GL
Sbjct: 405 -------------ELLGLLKNTCCP-PGLITYNSVID-----------GLAK----KGLM 435
Query: 386 HKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
KA + + +ML P+ LI+ CR V +A + KET + G
Sbjct: 436 KKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 7/249 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+++ +++++++ G + TYN L+H C + + E IL M + P V TY
Sbjct: 294 NLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYN 353
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G C+ L +A + +M+ + LPD TY ++ + ++G + A +L L +L+
Sbjct: 354 ILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL-LGLLKN 412
Query: 154 GVSPHKYI-YTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVL 212
P I Y +++ KG KAL+L +M++ G PD I+ +IY G C
Sbjct: 413 TCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIY-----GFCRA 467
Query: 213 GRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIY 272
VEEA +L+ ++ G +Y VI+G CK E A E+ M G E IY
Sbjct: 468 NLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIY 527
Query: 273 QSLLDDLSD 281
+++ + +
Sbjct: 528 TAIVKGVEE 536
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 157/382 (41%), Gaps = 39/382 (10%)
Query: 56 TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM 115
T NE++H C + +A ++ MA+ P + L+ G + +L KA + M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
V G +PD TY ++I LC+KG + A L +M G P Y ++ G
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
+A+ K L +G P ++ Y + C A+ +L MA G PD+V
Sbjct: 226 EQAIRFW-----KDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 236 SYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQ 295
+Y +++ C+ G + + + G+ L + VTY+TL++ +
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLEL-------------NTVTYNTLLHSLCSH 327
Query: 296 GNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYR 355
+ + + M + SY + ++ INGL K A + Q CL P
Sbjct: 328 EYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL--PDIV 385
Query: 356 TYDTLIENCSNNEFKTVVGLVKD-FSMRGLAHKAAKAHDKMLHGNYKPEGAI-YNLLIFD 413
TY+T++ S G+V D + GL L P G I YN +I
Sbjct: 386 TYNTVLGAMSKE------GMVDDAIELLGL-----------LKNTCCPPGLITYNSVIDG 428
Query: 414 HCRHGNVHKAYDMYKETVHSGV 435
+ G + KA ++Y + + +G+
Sbjct: 429 LAKKGLMKKALELYHQMLDAGI 450
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 5/223 (2%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+HSL + D+ +L M + P+V TYN LI+G C+A A+ M ++
Sbjct: 321 LHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKC 380
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD+ TY ++ + G + A E+ + + P TY +I L +KG + KA +
Sbjct: 381 LPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALE 440
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
L+ +ML G+ P L+ +C +A + E N+G +GI S Y
Sbjct: 441 LYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG---NGIRGS--TYRLV 495
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
I G C +E A+ ++ M G PD YT ++KG ++G
Sbjct: 496 IQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 5/248 (2%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D + V +L Q + + +L M+ G P+ TYN LIH Y RA+ KEA+ +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
M + G PD TY LI + G L A +M +M G+ PD TY ++I L +
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
G L A LF EM+ +G +P+ + ++ + + AL L +M N GF PD ++
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELK 257
S+V+ + G C G +EEA G+ M PD Y ++ + K G KA++
Sbjct: 538 SIVM---EVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 258 LEMDEKGI 265
M + G+
Sbjct: 593 QAMLQAGL 600
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 110/248 (44%), Gaps = 9/248 (3%)
Query: 34 QVDKAHNMLK--YMIVR--GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDV 89
Q+D N L Y + R GF TY ++ RA +F E +L +M + G P+
Sbjct: 335 QMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNT 394
Query: 90 DTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLE 149
TY LI + + L +A + +M G PD TY LI + G L A D++
Sbjct: 395 VTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQR 454
Query: 150 MLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGC 209
M G+SP + Y+ ++N G A L EM+ + G +P+LV +N I
Sbjct: 455 MQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQ-----GCTPNLVTFNIMIALH 509
Query: 210 CVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYE 269
E AL + R M + G PD V+Y+ V++ G +A + EM K E
Sbjct: 510 AKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDE 569
Query: 270 DIYQSLLD 277
+Y L+D
Sbjct: 570 PVYGLLVD 577
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 31/284 (10%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+D A +M + M G SP TY+ +I+ +A A + +M +G +P++ T+
Sbjct: 445 LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 504
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
+I + A ++ M + G PD TY I++ L G L +A +F EM R+
Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN 564
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD-GISPSLVIYNARIHGCCVLG 213
P + +Y L++ + G KA M+ G P+ SL+ R+H
Sbjct: 565 WVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVH------ 618
Query: 214 RVEEALGILRGMADMGLSPDVVSYT-----------NVIKGFCK-----IGEPVKAFELK 257
R+ EA +L+ M +GL P + +YT N GFC G P F LK
Sbjct: 619 RMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAHMFLLK 678
Query: 258 LEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDA 301
+ D + LD + E D ++ LMDA
Sbjct: 679 MPPAGPDGQKVRDHVSNFLDFMHSE--------DRESKRGLMDA 714
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 6/206 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD ++ L + AH + M+ +G +P++ T+N +I + +A ++ A+
Sbjct: 460 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETAL 519
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ RDM G PD TY ++ G L +A + A+M K +PD YG+L+
Sbjct: 520 KLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLW 579
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ G + KA+ + ML+ G+ P+ L++ + S+A +L M L G
Sbjct: 580 GKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM-----LALG 634
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALG 220
+ PSL Y + CC R +G
Sbjct: 635 LHPSLQTYTLLL-SCCTDARSNFDMG 659
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 119/297 (40%), Gaps = 36/297 (12%)
Query: 141 SKAFDLFLEMLRE-GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
+ A F + R+ G + YT ++ +F + L DEM+ DG P+
Sbjct: 340 ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVR-----DGCKPNT 394
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
V YN IH ++EA+ + M + G PD V+Y +I K G A ++
Sbjct: 395 VTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQR 454
Query: 260 MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
M E G+ D TYS +IN G+L A+ L EM + V
Sbjct: 455 MQEAGLS-------------PDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVT 501
Query: 320 SSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDF 379
++ I L+ KA E L R Q+ P TY ++E V+G
Sbjct: 502 FNIMI-ALHAKARNYETALKLYR-DMQNAGFQPDKVTYSIVME---------VLGHC--- 547
Query: 380 SMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
G +A +M N+ P+ +Y LL+ + GNV KA+ Y+ + +G+
Sbjct: 548 ---GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLR 601
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 190/450 (42%), Gaps = 54/450 (12%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD + V VD+A + M + P+V TYN L+ GY R F + +
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ + M KRG++ D + L+ + G +A ++ ++ +G+L D T ++I L
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 516
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C+ ++++A ++ + P Y L + Y G +A + + M K G
Sbjct: 517 CKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK-----G 571
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
I P++ +YN I G + + ++ + GL+P V +Y +I G+C IG KA+
Sbjct: 572 IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDL-----SDE--------VTYSTLINDFHAQGNLMDA 301
EM EKGI L +I + + L DE V + L+ + + ++A
Sbjct: 632 ATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEA 691
Query: 302 ---YCLESEMSEYS---------YLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCL 349
CL+++ S + ++++ +V I GL K +A++ + D L
Sbjct: 692 SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARK-----LFSDLL 746
Query: 350 S----IPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGA 405
S IP TY LI C ++ G +KA D+M P
Sbjct: 747 SSDRFIPDEYTYTILIHGC---------------AIAGDINKAFTLRDEMALKGIIPNIV 791
Query: 406 IYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
YN LI C+ GNV +A + + G+
Sbjct: 792 TYNALIKGLCKLGNVDRAQRLLHKLPQKGI 821
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 185/455 (40%), Gaps = 88/455 (19%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAV------------------------------ 74
MI SP V T + +++ YCR+ +A+
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 275
Query: 75 ------GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYG 128
+LR M++RG+S +V TY LI G+C+ G + +A + + K ++ D YG
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Query: 129 ILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINK 188
+L+ CR G++ A + M+ GV + I L+N YC G+ +A + M +
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 189 GFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
PD + YN + G C G V+EAL + M + P V++Y ++KG+ +IG
Sbjct: 396 SLKPDHHT-----YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450
Query: 249 EPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
L M ++G+ +DE++ STL+ G+ +A L +
Sbjct: 451 AFHDVLSLWKMMLKRGVN-------------ADEISCSTLLEALFKLGDFNEAMKLWENV 497
Query: 309 SEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNE 368
LTD + +V I+GL K EAK L C PA +TY L S+
Sbjct: 498 LARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK--PAVQTYQAL----SHGY 551
Query: 369 FKTVVG------LVKDFSMRGLAHKAAKAHDKMLHGNYK--------------------P 402
+K VG VK++ R + ++ ++ G +K P
Sbjct: 552 YK--VGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTP 609
Query: 403 EGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
A Y LI C G + KAY E + G+ +
Sbjct: 610 TVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 174/407 (42%), Gaps = 60/407 (14%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVG------------------ILRDMAKRGLSPDVDT 91
F P Y +++H RA +++ ++R + SP V
Sbjct: 100 FRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTV-- 157
Query: 92 YYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML 151
+ ++ + + G + A + M + G +P + L+ L RKG A ++ +M+
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 152 REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCV 211
VSP + + ++N YC G KA+ E + G+ ++V YN+ I+G +
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETES----SLGLELNVVTYNSLINGYAM 273
Query: 212 LGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG---EPVKAFELKLEMDEKGIPLY 268
+G VE +LR M++ G+S +VV+YT++IKG+CK G E FEL + EK +
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL---LKEKKL--- 327
Query: 269 EDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLN 328
++D+ Y L++ + G + DA + M E T+ I + ING
Sbjct: 328 ----------VADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377
Query: 329 KKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKA 388
K +EA++ R D P + TY+TL++ + G +A
Sbjct: 378 KSGQLVEAEQIFSRM--NDWSLKPDHHTYNTLVDG---------------YCRAGYVDEA 420
Query: 389 AKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
K D+M P YN+L+ + R G H ++K + GV
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGV 467
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 174/417 (41%), Gaps = 64/417 (15%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++ DE + + + +L + ++A + + ++ RG T N +I G C+ ++ EA
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
IL ++ P V TY L G+ + G L +AF +K M KGI P + Y LI
Sbjct: 527 EILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGA 586
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF---- 190
+ L+K DL +E+ G++P Y L+ +C G KA EMI KG
Sbjct: 587 FKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNV 646
Query: 191 -LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG-------------------- 229
+ I+ SL + C +L ++ + +L G +
Sbjct: 647 NICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESV 706
Query: 230 --------LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDD-LS 280
L P+ + Y I G CK G KLE K L+ D+ S D +
Sbjct: 707 ENSTPKKLLVPNNIVYNVAIAGLCKAG--------KLEDARK---LFSDLLSS--DRFIP 753
Query: 281 DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSL 340
DE TY+ LI+ G++ A+ L EM+ + + V + I GL K A+R L
Sbjct: 754 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQR-L 812
Query: 341 VRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLH 397
+ Q ++ P TY+TLI+ GLVK G +A + +KM+
Sbjct: 813 LHKLPQKGIT-PNAITYNTLID-----------GLVKS----GNVAEAMRLKEKMIE 853
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PDE +H ++KA + M ++G P++ TYN LI G C+ A +
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRL 812
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYG 128
L + ++G++P+ TY LI G ++G + +A +K KM+ KG++ +D G
Sbjct: 813 LHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQG 864
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 178/426 (41%), Gaps = 80/426 (18%)
Query: 13 VILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRG--------FSPSVATYNELIHGY 64
V + PD L +++L +VD+A + + M RG +N LI G
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEKM--RGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 65 CRADRFKEAVGILRDMA-KRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPD 123
C+ R KEA +L M + +P+ TY LI G+C+ GKL A E+ ++M I P+
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 124 ADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPD 183
T ++ +CR L+ A F++M +EGV + Y L++ C KA+ +
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYE 500
Query: 184 EMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
+M+ G PD IY A I G C + R +A+ ++ + + G S D+++Y +I
Sbjct: 501 KMLEAGCSPDA-----KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 244 FCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYC 303
FC K +E+ +M+++G D +TY+TLI+ F G D
Sbjct: 556 FCDKNNTEKVYEMLTDMEKEG-------------KKPDSITYNTLISFF---GKHKDFES 599
Query: 304 LESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN 363
+E M + +R +GL+ TT A I AY
Sbjct: 600 VERMMEQ-----------MREDGLDPTVTTYGA-------------VIDAY--------- 626
Query: 364 CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKA 423
CS E + L KD LH P IYN+LI + GN +A
Sbjct: 627 CSVGELDEALKLFKDMG---------------LHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 424 YDMYKE 429
+ +E
Sbjct: 672 LSLKEE 677
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 122/295 (41%), Gaps = 47/295 (15%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL-------- 85
+++ A ++ M P+V T N ++ G CR AV DM K G+
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 86 ---------------------------SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK 118
SPD YY LI G CQ + A + K+
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
G D Y +LI C K K +++ +M +EG P Y L++++ +F
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL----SPDV 234
+ ++M DG+ P++ Y A I C +G ++EAL + + DMGL +P+
Sbjct: 601 ERMMEQM-----REDGLDPTVTTYGAVIDAYCSVGELDEALKLFK---DMGLHSKVNPNT 652
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLI 289
V Y +I F K+G +A LK EM K + + Y +L L+++ TL+
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLL 707
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 6/259 (2%)
Query: 23 LSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
++ +H+ +V V+KA + M+ G SP Y LI G C+ R +A+ ++ + +
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
G S D+ Y LI FC K +EM M +G PD+ TY LI + K + +
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI-SFFGKHKDFE 598
Query: 143 AFDLFLEMLRE-GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
+ + +E +RE G+ P Y +++ YC GE +AL L +M L ++P+ VI
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM----GLHSKVNPNTVI 654
Query: 202 YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMD 261
YN I+ LG +AL + M + P+V +Y + K + + +L EM
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Query: 262 EKGIPLYEDIYQSLLDDLS 280
E+ + + L++ LS
Sbjct: 715 EQSCEPNQITMEILMERLS 733
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 6/237 (2%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + + + L V + A +++ + GFS + YN LI +C + ++ +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEM 568
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L DM K G PD TY LI F + M +M G+ P TYG +I C
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 137 KGRLSKAFDLFLEM-LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
G L +A LF +M L V+P+ IY L+N + G F +AL L +EM K +
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK-----MV 683
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVK 252
P++ YNA + E L ++ M + P+ ++ +++ E VK
Sbjct: 684 RPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVK 740
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 142/354 (40%), Gaps = 45/354 (12%)
Query: 107 KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLM 166
K + ++ G+ P++ I +LC+ R + A+D+ ++++ + L+
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALL 301
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM- 225
+ + S+ DL +M PD ++ ++ I+ C RV+EAL + M
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGIL-----INTLCKSRRVDEALEVFEKMR 356
Query: 226 ---ADMG--LSPDVVSYTNVIKGFCKIGEPVKAFEL--KLEMDEKGIPLYEDIYQSLLDD 278
D G + D + + +I G CK+G +A EL +++++E+ P
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAP------------ 404
Query: 279 LSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSV------RINGLNKKAT 332
+ VTY+ LI+ + G L A + S M E + V + R +GLN
Sbjct: 405 --NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 333 TIE------AKRSLVRW--FYQDCLSIP----AYRTYDTLIENCSNNEFKTVVGLVKDFS 380
K ++V + C S+ A Y+ ++E + + K L+
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 381 MRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
H A + +K+ G + + YN+LI C N K Y+M + G
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEG 576
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 177/426 (41%), Gaps = 80/426 (18%)
Query: 13 VILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRG--------FSPSVATYNELIHGY 64
V + PD L +++L +VD+A + + M RG +N LI G
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 65 CRADRFKEAVGILRDMA-KRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPD 123
C+ R KEA +L M + P+ TY LI G+C+ GKL A E+ ++M I P+
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 124 ADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPD 183
T ++ +CR L+ A F++M +EGV + Y L++ C KA+ +
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYE 500
Query: 184 EMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
+M+ G PD IY A I G C + R +A+ ++ + + G S D+++Y +I
Sbjct: 501 KMLEAGCSPDA-----KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 244 FCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYC 303
FC K +E+ +M+++G D +TY+TLI+ F G D
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEGKK-------------PDSITYNTLISFF---GKHKDFES 599
Query: 304 LESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN 363
+E M + +R +GL+ TT A I AY
Sbjct: 600 VERMMEQ-----------MREDGLDPTVTTYGA-------------VIDAY--------- 626
Query: 364 CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKA 423
CS E + L KD LH P IYN+LI + GN +A
Sbjct: 627 CSVGELDEALKLFKDMG---------------LHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 424 YDMYKE 429
+ +E
Sbjct: 672 LSLKEE 677
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 122/295 (41%), Gaps = 47/295 (15%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL-------- 85
+++ A ++ M P+V T N ++ G CR AV DM K G+
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 86 ---------------------------SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK 118
SPD YY LI G CQ + A + K+
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
G D Y +LI C K K +++ +M +EG P Y L++++ +F
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL----SPDV 234
+ ++M DG+ P++ Y A I C +G ++EAL + + DMGL +P+
Sbjct: 601 ERMMEQM-----REDGLDPTVTTYGAVIDAYCSVGELDEALKLFK---DMGLHSKVNPNT 652
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLI 289
V Y +I F K+G +A LK EM K + + Y +L L+++ TL+
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLL 707
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 108/221 (48%), Gaps = 6/221 (2%)
Query: 23 LSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
++ +H+ +V V+KA + M+ G SP Y LI G C+ R +A+ ++ + +
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
G S D+ Y LI FC K +EM M +G PD+ TY LI + K + +
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI-SFFGKHKDFE 598
Query: 143 AFDLFLEMLRE-GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
+ + +E +RE G+ P Y +++ YC GE +AL L +M L ++P+ VI
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM----GLHSKVNPNTVI 654
Query: 202 YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIK 242
YN I+ LG +AL + M + P+V +Y + K
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK 695
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + + + L V + A +++ + GFS + YN LI +C + ++ +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L DM K G PD TY LI F + M +M G+ P TYG +I C
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 137 KGRLSKAFDLFLEM-LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
G L +A LF +M L V+P+ IY L+N + G F +AL L +EM K +
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK-----MV 683
Query: 196 SPSLVIYNA 204
P++ YNA
Sbjct: 684 RPNVETYNA 692
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 143/354 (40%), Gaps = 45/354 (12%)
Query: 107 KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLM 166
K + ++ G+ P++ I +LC+ R + A+D+ ++++ + L+
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL 301
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM- 225
+ + S+ DL +M PD ++ ++ I+ C RV+EAL + M
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGIL-----INTLCKSRRVDEALEVFEQMR 356
Query: 226 ---ADMG--LSPDVVSYTNVIKGFCKIGEPVKAFEL--KLEMDEKGIPLYEDIYQSLLDD 278
D G + D + + +I G CK+G +A EL +++++E+ +P
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVP------------ 404
Query: 279 LSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSV------RINGLNKKAT 332
+ VTY+ LI+ + G L A + S M E + V + R +GLN
Sbjct: 405 --NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 333 TIE------AKRSLVRW--FYQDCLSIP----AYRTYDTLIENCSNNEFKTVVGLVKDFS 380
K ++V + C S+ A Y+ ++E + + K L+
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 381 MRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
H A + +K+ G + + YN+LI C N K Y+M + G
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG-LSPDVDTYYP 94
+ M++ M G P+V TY +I YC EA+ + +DM ++P+ Y
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI F + G G+A +K +M K + P+ +TY L L K + L EM+
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHL 717
Query: 155 VS 156
V+
Sbjct: 718 VN 719
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 5/248 (2%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D + V +L Q + +L M+ G P+ TYN LIH Y RA+ EA+ +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
M + G PD TY LI + G L A +M +M G+ PD TY ++I L +
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
G L A LF EM+ +G +P+ Y +M+ + + AL L +M N GF PD ++
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELK 257
S+V+ + G C G +EEA + M PD Y ++ + K G KA++
Sbjct: 543 SIVM---EVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 258 LEMDEKGI 265
M G+
Sbjct: 598 QAMLHAGL 605
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 147/349 (42%), Gaps = 39/349 (11%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GF TY ++ RA +F +L +M + G P+ TY LI + + L +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ +M G PD TY LI + G L A D++ M G+SP + Y+ ++N
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
G A L EM+++ G +P+LV YN + + AL + R M +
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQ-----GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
G PD V+Y+ V++ G +A + EM +K + + DE Y L
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-------------NWIPDEPVYGLL 580
Query: 289 INDFHAQGNLMDAY-----CLESEMSEYSYLTDDVISS-VRINGLNKKATTIEAKRSLVR 342
++ + GN+ A+ L + + + ++S+ +R+ NK A E
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV---NKIAEAYE------- 630
Query: 343 WFYQDCLSI---PAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKA 388
Q+ L++ P+ +TY L+ C++ K +G M H A
Sbjct: 631 -LLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQL-MASTGHPA 677
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 24/244 (9%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD ++ L + AH + M+ +G +P++ TYN ++ + +A ++ A+
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ RDM G PD TY ++ G L +A + +M K +PD YG+L+
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ G + KA+ + ML G+ P+ L++ + + ++A +L M L G
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM-----LALG 639
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ PSL Y + CC GR + DMG +++ T G P F
Sbjct: 640 LRPSLQTYTLLL-SCCTDGRSK---------LDMGFCGQLMAST---------GHPAHMF 680
Query: 255 ELKL 258
LK+
Sbjct: 681 LLKM 684
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 121/295 (41%), Gaps = 36/295 (12%)
Query: 143 AFDLFLEMLRE-GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
A F + R+ G + YT ++ +F L DEM+ DG P+ V
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR-----DGCQPNTVT 401
Query: 202 YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMD 261
YN IH + EA+ + M + G PD V+Y +I K G L + MD
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF------LDIAMD 455
Query: 262 EKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISS 321
+Y+ + L D TYS +IN G+L A+ L EM + + V +
Sbjct: 456 -----MYQRMQAGGLS--PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 322 VRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSM 381
+ ++ L+ KA + L R Q+ P TY ++E V+G
Sbjct: 509 IMMD-LHAKARNYQNALKLYR-DMQNAGFEPDKVTYSIVME---------VLGHC----- 552
Query: 382 RGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
G +A +M N+ P+ +Y LL+ + GNV KA+ Y+ +H+G+
Sbjct: 553 -GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 5/248 (2%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D + V +L Q + +L M+ G P+ TYN LIH Y RA+ EA+ +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
M + G PD TY LI + G L A +M +M G+ PD TY ++I L +
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
G L A LF EM+ +G +P+ Y +M+ + + AL L +M N GF PD ++
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELK 257
S+V+ + G C G +EEA + M PD Y ++ + K G KA++
Sbjct: 543 SIVM---EVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 258 LEMDEKGI 265
M G+
Sbjct: 598 QAMLHAGL 605
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 147/349 (42%), Gaps = 39/349 (11%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GF TY ++ RA +F +L +M + G P+ TY LI + + L +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ +M G PD TY LI + G L A D++ M G+SP + Y+ ++N
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
G A L EM+++ G +P+LV YN + + AL + R M +
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQ-----GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
G PD V+Y+ V++ G +A + EM +K + + DE Y L
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-------------NWIPDEPVYGLL 580
Query: 289 INDFHAQGNLMDAY-----CLESEMSEYSYLTDDVISS-VRINGLNKKATTIEAKRSLVR 342
++ + GN+ A+ L + + + ++S+ +R+ NK A E
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV---NKIAEAYE------- 630
Query: 343 WFYQDCLSI---PAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKA 388
Q+ L++ P+ +TY L+ C++ K +G M H A
Sbjct: 631 -LLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQL-MASTGHPA 677
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 24/244 (9%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD ++ L + AH + M+ +G +P++ TYN ++ + +A ++ A+
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ RDM G PD TY ++ G L +A + +M K +PD YG+L+
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ G + KA+ + ML G+ P+ L++ + + ++A +L M L G
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM-----LALG 639
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ PSL Y + CC GR + DMG +++ T G P F
Sbjct: 640 LRPSLQTYTLLL-SCCTDGRSK---------LDMGFCGQLMAST---------GHPAHMF 680
Query: 255 ELKL 258
LK+
Sbjct: 681 LLKM 684
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 121/295 (41%), Gaps = 36/295 (12%)
Query: 143 AFDLFLEMLRE-GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
A F + R+ G + YT ++ +F L DEM+ DG P+ V
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR-----DGCQPNTVT 401
Query: 202 YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMD 261
YN IH + EA+ + M + G PD V+Y +I K G L + MD
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF------LDIAMD 455
Query: 262 EKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISS 321
+Y+ + L D TYS +IN G+L A+ L EM + + V +
Sbjct: 456 -----MYQRMQAGGLS--PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 322 VRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSM 381
+ ++ L+ KA + L R Q+ P TY ++E V+G
Sbjct: 509 IMMD-LHAKARNYQNALKLYR-DMQNAGFEPDKVTYSIVME---------VLGHC----- 552
Query: 382 RGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
G +A +M N+ P+ +Y LL+ + GNV KA+ Y+ +H+G+
Sbjct: 553 -GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+ H +L M+ G P T + + C R EA +++++ ++ PD TY
Sbjct: 139 SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYN 198
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHK-GILPDADTYGILILTLCRKGRLSKAFDLFLEMLR 152
L+ C+ L +E +M + PD ++ ILI +C L +A L ++
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 153 EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVL 212
G P ++Y +M +C + S+A+ + +M +G PD I+ YN I G
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT-----YNTLIFGLSKA 313
Query: 213 GRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIY 272
GRVEEA L+ M D G PD +YT+++ G C+ GE + A L EM+ +G + Y
Sbjct: 314 GRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTY 373
Query: 273 QSLLDDL 279
+LL L
Sbjct: 374 NTLLHGL 380
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 127/311 (40%), Gaps = 56/311 (18%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCR-------- 66
L+PD+ V SL +VD+A +++K + + P TYN L+ C+
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVY 214
Query: 67 ----------------------------ADRFKEAVGILRDMAKRGLSPDVDTYYPLICG 98
+ +EA+ ++ + G PD Y ++ G
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 99 FCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPH 158
FC K +A + KM +G+ PD TY LI L + GR+ +A M+ G P
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 159 KYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEA 218
YT LMN C KGE AL L +EM +G P+ + YN +HG C +++
Sbjct: 335 TATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCT-----YNTLLHGLCKARLMDKG 389
Query: 219 LGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL-KLEMDEKGIPLYEDIYQSLLD 277
+ + M G+ + Y +++ K G+ +A+E+ +D K
Sbjct: 390 MELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKS------------- 436
Query: 278 DLSDEVTYSTL 288
LSD YSTL
Sbjct: 437 -LSDASAYSTL 446
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 154/381 (40%), Gaps = 38/381 (9%)
Query: 57 YNELIHGYCRADRFKEAVGILRDMAKR--GLSPDVDTYYPLICGFCQT--GKLGKAFEMK 112
+N ++ Y + V + + + K P T+ L+ C+ + +
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
MV+ G+ PD T I + +LC GR+ +A DL E+ + P Y Y L+ + C
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
+ + DEM + + P LV + I C + EA+ ++ + + G P
Sbjct: 208 KDLHVVYEFVDEMRDDF----DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 233 DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDF 292
D Y ++KGFC + + +A + +M E+G+ D++TY+TLI
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE-------------PDQITYNTLIFGL 310
Query: 293 HAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIP 352
G + +A M + Y D + +NG+ +K ++ A L + C P
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGC--AP 368
Query: 353 AYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIF 412
TY+TL+ GL K L K + ++ M K E Y L+
Sbjct: 369 NDCTYNTLLH-----------GLCK----ARLMDKGMELYEMMKSSGVKLESNGYATLVR 413
Query: 413 DHCRHGNVHKAYDMYKETVHS 433
+ G V +AY+++ V S
Sbjct: 414 SLVKSGKVAEAYEVFDYAVDS 434
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD S ++ + + A ++L+ M RG +P+ TYN L+HG C+A + +
Sbjct: 332 EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME 391
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ M G+ + + Y L+ ++GK+ +A+E+ V L DA Y L TL
Sbjct: 392 LYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 5/248 (2%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D + V +L Q + +L M+ G P+ TYN LIH Y RA+ EA+ +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
M + G PD TY LI + G L A +M +M G+ PD TY ++I L +
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
G L A LF EM+ +G +P+ Y +M+ + + AL L +M N GF PD ++
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELK 257
S+V+ + G C G +EEA + M PD Y ++ + K G KA++
Sbjct: 543 SIVM---EVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 258 LEMDEKGI 265
M G+
Sbjct: 598 QAMLHAGL 605
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 147/349 (42%), Gaps = 39/349 (11%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GF TY ++ RA +F +L +M + G P+ TY LI + + L +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ +M G PD TY LI + G L A D++ M G+SP + Y+ ++N
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
G A L EM+++ G +P+LV YN + + AL + R M +
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQ-----GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
G PD V+Y+ V++ G +A + EM +K + + DE Y L
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-------------NWIPDEPVYGLL 580
Query: 289 INDFHAQGNLMDAY-----CLESEMSEYSYLTDDVISS-VRINGLNKKATTIEAKRSLVR 342
++ + GN+ A+ L + + + ++S+ +R+ NK A E
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV---NKIAEAYE------- 630
Query: 343 WFYQDCLSI---PAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKA 388
Q+ L++ P+ +TY L+ C++ K +G M H A
Sbjct: 631 -LLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQL-MASTGHPA 677
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 24/244 (9%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD ++ L + AH + M+ +G +P++ TYN ++ + +A ++ A+
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ RDM G PD TY ++ G L +A + +M K +PD YG+L+
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ G + KA+ + ML G+ P+ L++ + + ++A +L M L G
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM-----LALG 639
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ PSL Y + CC GR + DMG +++ T G P F
Sbjct: 640 LRPSLQTYTLLL-SCCTDGRSK---------LDMGFCGQLMAST---------GHPAHMF 680
Query: 255 ELKL 258
LK+
Sbjct: 681 LLKM 684
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 121/295 (41%), Gaps = 36/295 (12%)
Query: 143 AFDLFLEMLRE-GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
A F + R+ G + YT ++ +F L DEM+ DG P+ V
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR-----DGCQPNTVT 401
Query: 202 YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMD 261
YN IH + EA+ + M + G PD V+Y +I K G L + MD
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF------LDIAMD 455
Query: 262 EKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISS 321
+Y+ + L D TYS +IN G+L A+ L EM + + V +
Sbjct: 456 -----MYQRMQAGGLS--PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 322 VRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSM 381
+ ++ L+ KA + L R Q+ P TY ++E V+G
Sbjct: 509 IMMD-LHAKARNYQNALKLYR-DMQNAGFEPDKVTYSIVME---------VLGHC----- 552
Query: 382 RGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
G +A +M N+ P+ +Y LL+ + GNV KA+ Y+ +H+G+
Sbjct: 553 -GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR-GLSPDVDTYYP 94
D A + M+ + P+ T+ LIHG C+ R KEA+ + DM K G+ P V Y
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYAS 228
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI CQ G+L AF++K + I DA Y LI +L + GR ++ + EM +G
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG 288
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
P Y L+N +C + + A + DEM+ KG PD IS YN + + +
Sbjct: 289 CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS-----YNMILGVFFRIKK 343
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
EEA + M G SPD +SY V G C+ + +A + EM KG D +
Sbjct: 344 WEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEG 403
Query: 275 LLDDLSD 281
L L +
Sbjct: 404 FLQKLCE 410
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 6/235 (2%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P TYN LIHG ++ F +A+ + +M K+ + P T+ LI G C+ ++ +A +M
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 112 KAKMVHK-GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
K M+ G+ P Y LI LC+ G LS AF L E + IY+ L++
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
G ++ + +EM KG PD ++ YN I+G CV E A +L M + GL
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVT-----YNVLINGFCVENDSESANRVLDEMVEKGL 324
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTY 285
PDV+SY ++ F +I + +A L +M +G Y+ + D L + + +
Sbjct: 325 KPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQF 379
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 55 ATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAK 114
A Y+ LI +A R E IL +M+++G PD TY LI GFC A + +
Sbjct: 259 AIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDE 318
Query: 115 MVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
MV KG+ PD +Y +++ R + +A LF +M R G SP Y + + C +
Sbjct: 319 MVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ 378
Query: 175 FSKALDLPDEMINKGFLPDGISPSLVIYNARIHG----CCVLGRVEEALGILRGMADMGL 230
F +A + DEM+ KG+ P R+ G C G++E ++ + G+
Sbjct: 379 FEEAAVILDEMLFKGYKP---------RRDRLEGFLQKLCESGKLEILSKVISSL-HRGI 428
Query: 231 SPDVVSYTNVIKGFCKIGEPV 251
+ D ++ +I CK EPV
Sbjct: 429 AGDADVWSVMIPTMCK--EPV 447
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 89/201 (44%), Gaps = 26/201 (12%)
Query: 148 LEMLREGVS-------PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
LE ++E +S P Y L++ G F AL L DEM+ K P G++
Sbjct: 134 LEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVT---- 189
Query: 201 IYNARIHGCCVLGRVEEALGILRGMADM-GLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
+ IHG C RV+EAL + M + G+ P V Y ++IK C+IGE AF+LK E
Sbjct: 190 -FGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE 248
Query: 260 MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
E I + D YSTLI+ G + + EMSE D V
Sbjct: 249 AYEGKIKV-------------DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVT 295
Query: 320 SSVRINGLNKKATTIEAKRSL 340
+V ING + + A R L
Sbjct: 296 YNVLINGFCVENDSESANRVL 316
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 29 LLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPD 88
+ + ++A + + M RG SP +Y + G C +F+EA IL +M +G P
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPR 397
Query: 89 VDTYYPLICGFCQTGKLGKAFEMKAKMV---HKGILPDADTYGILILTLCRKGRLSKAFD 145
D + C++GKL E+ +K++ H+GI DAD + ++I T+C++ +S + D
Sbjct: 398 RDRLEGFLQKLCESGKL----EILSKVISSLHRGIAGDADVWSVMIPTMCKEPVISDSID 453
Query: 146 LFLEMLRE 153
L L ++E
Sbjct: 454 LLLNTVKE 461
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ SL+ + ++ +L+ M +G P TYN LI+G+C + + A +L +M ++GL
Sbjct: 265 ISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PDV +Y ++ F + K +A + M +G PD +Y I+ LC + +A
Sbjct: 325 KPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAV 384
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
+ EML +G P + + C G+
Sbjct: 385 ILDEMLFKGYKPRRDRLEGFLQKLCESGKL 414
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 177/426 (41%), Gaps = 80/426 (18%)
Query: 13 VILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRG--------FSPSVATYNELIHGY 64
V + PD L +++L +VD+A + + M RG +N LI G
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 65 CRADRFKEAVGILRDMA-KRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPD 123
C+ R KEA +L M + P+ TY LI G+C+ GKL A E+ ++M I P+
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 124 ADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPD 183
T ++ +CR L+ A F++M +EGV + Y L++ C KA+ +
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYE 500
Query: 184 EMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
+M+ G PD IY A I G C + R +A+ ++ + + G S D+++Y +I
Sbjct: 501 KMLEAGCSPDA-----KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 244 FCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYC 303
FC K +E+ +M+++G D +TY+TLI+ F G D
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEG-------------KKPDSITYNTLISFF---GKHKDFES 599
Query: 304 LESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN 363
+E M + +R +GL+ TT A I AY
Sbjct: 600 VERMMEQ-----------MREDGLDPTVTTYGA-------------VIDAY--------- 626
Query: 364 CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKA 423
CS E + L KD LH P IYN+LI + GN +A
Sbjct: 627 CSVGELDEALKLFKDMG---------------LHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 424 YDMYKE 429
+ +E
Sbjct: 672 LSLKEE 677
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 122/295 (41%), Gaps = 47/295 (15%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL-------- 85
+++ A ++ M P+V T N ++ G CR AV DM K G+
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 86 ---------------------------SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK 118
SPD YY LI G CQ + A + K+
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
G D Y +LI C K K +++ +M +EG P Y L++++ +F
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL----SPDV 234
+ ++M DG+ P++ Y A I C +G ++EAL + + DMGL +P+
Sbjct: 601 ERMMEQM-----REDGLDPTVTTYGAVIDAYCSVGELDEALKLFK---DMGLHSKVNPNT 652
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLI 289
V Y +I F K+G +A LK EM K + + Y +L L+++ TL+
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLL 707
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 6/259 (2%)
Query: 23 LSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
++ +H+ +V V+KA + M+ G SP Y LI G C+ R +A+ ++ + +
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
G S D+ Y LI FC K +EM M +G PD+ TY LI + K + +
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI-SFFGKHKDFE 598
Query: 143 AFDLFLEMLRE-GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
+ + +E +RE G+ P Y +++ YC GE +AL L +M L ++P+ VI
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM----GLHSKVNPNTVI 654
Query: 202 YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMD 261
YN I+ LG +AL + M + P+V +Y + K + + +L EM
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Query: 262 EKGIPLYEDIYQSLLDDLS 280
E+ + + L++ LS
Sbjct: 715 EQSCEPNQITMEILMERLS 733
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 6/237 (2%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + + + L V + A +++ + GFS + YN LI +C + ++ +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L DM K G PD TY LI F + M +M G+ P TYG +I C
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 137 KGRLSKAFDLFLEM-LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
G L +A LF +M L V+P+ IY L+N + G F +AL L +EM K +
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK-----MV 683
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVK 252
P++ YNA + E L ++ M + P+ ++ +++ E VK
Sbjct: 684 RPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVK 740
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 143/354 (40%), Gaps = 45/354 (12%)
Query: 107 KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLM 166
K + ++ G+ P++ I +LC+ R + A+D+ ++++ + L+
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL 301
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM- 225
+ + S+ DL +M PD ++ ++ I+ C RV+EAL + M
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGIL-----INTLCKSRRVDEALEVFEQMR 356
Query: 226 ---ADMG--LSPDVVSYTNVIKGFCKIGEPVKAFEL--KLEMDEKGIPLYEDIYQSLLDD 278
D G + D + + +I G CK+G +A EL +++++E+ +P
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVP------------ 404
Query: 279 LSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSV------RINGLNKKAT 332
+ VTY+ LI+ + G L A + S M E + V + R +GLN
Sbjct: 405 --NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 333 TIE------AKRSLVRW--FYQDCLSIP----AYRTYDTLIENCSNNEFKTVVGLVKDFS 380
K ++V + C S+ A Y+ ++E + + K L+
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 381 MRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
H A + +K+ G + + YN+LI C N K Y+M + G
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 5/249 (2%)
Query: 28 SLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSP 87
SLL +VD A + M SP+ T N ++ GYCR+ + + + +L+DM + G
Sbjct: 212 SLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRA 271
Query: 88 DVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLF 147
+Y LI G C+ G L A ++K M G+ P+ T+ LI CR +L +A +F
Sbjct: 272 TDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 148 LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIH 207
EM V+P+ Y L+N Y +G+ A ++M+ +GI ++ YNA I
Sbjct: 332 GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV-----CNGIQRDILTYNALIF 386
Query: 208 GCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPL 267
G C + +A ++ + L P+ +++ +I G C + FEL M G
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHP 446
Query: 268 YEDIYQSLL 276
E + L+
Sbjct: 447 NEQTFNMLV 455
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 169/408 (41%), Gaps = 59/408 (14%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRG--------------------LSPDVD 90
S S+ T+ ++H + +FK A ILRD+ G +P V
Sbjct: 112 SHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV- 170
Query: 91 TYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM 150
+ L F K A + +M G LP ++ + +L +GR+ A + EM
Sbjct: 171 -FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 151 LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCC 210
R +SP+ Y +M+ YC G+ K ++L +M GF +S YN I G C
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVS-----YNTLIAGHC 284
Query: 211 VLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYED 270
G + AL + M GL P+VV++ +I GFC+ + +A ++ EM +
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVA---- 340
Query: 271 IYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKK 330
+ VTY+TLIN + QG+ A+ +M D + + I GL K+
Sbjct: 341 ---------PNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQ 391
Query: 331 ATTIEAKRSLVRWFYQDCLSIPAYRTYDTLI-ENCSNNEFKTVVGLVKDFSMRGLAHKAA 389
A T +A + V+ ++ L +P T+ LI C +R A +
Sbjct: 392 AKTRKAAQ-FVKELDKENL-VPNSSTFSALIMGQC----------------VRKNADRGF 433
Query: 390 KAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
+ + M+ P +N+L+ CR+ + A + +E V + +
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Query: 42 LKYMIVR-GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFC 100
LK M+ + G P+V T+N LIHG+CRA + +EA + +M ++P+ TY LI G+
Sbjct: 295 LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYS 354
Query: 101 QTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKY 160
Q G AF MV GI D TY LI LC++ + KA E+ +E + P+
Sbjct: 355 QQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSS 414
Query: 161 IYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALG 220
++ L+ C + + +L MI G P+ +N + C + A
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSMIR-----SGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 221 ILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
+LR M + D + V G G+ +L EM+ K
Sbjct: 470 VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 145/346 (41%), Gaps = 29/346 (8%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
+P V ++ L + +F+ A M G P V++ + G++ A
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
+M I P+ T +++ CR G+L K +L +M R G Y L+ +C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
KG S AL L + M+ K G+ P++V +N IHG C +++EA + M + +
Sbjct: 285 EKGLLSSALKLKN-MMGKS----GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIN 290
+P+ V+Y +I G+ + G+ AF +M GI D +TY+ LI
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQ-------------RDILTYNALIF 386
Query: 291 DFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRING--LNKKATT-IEAKRSLVRWFYQD 347
Q A E+ + + + + S I G + K A E +S++R
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIR---SG 443
Query: 348 CLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAH 392
C P +T++ L+ C N +F ++++ R + + H
Sbjct: 444 CH--PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH 487
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 9/230 (3%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GF P+V + N + R A+ R+M + +SP+ T ++ G+C++GKL K
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
E+ M G +Y LI C KG LS A L M + G+ P+ + L++
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 169 YCFKGEFSKALDLPDEM--INKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA 226
+C + +A + EM +N ++P+ V YN I+G G E A M
Sbjct: 318 FCRAMKLQEASKVFGEMKAVN-------VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
G+ D+++Y +I G CK + KA + E+D++ + + +L+
Sbjct: 371 CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L P+ + +H ++ +A + M +P+ TYN LI+GY + + A
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAF 363
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
DM G+ D+ TY LI G C+ K KA + ++ + ++P++ T+ LI+
Sbjct: 364 RFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQ 423
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINK 188
C + + F+L+ M+R G P++ + L++ +C +F A + EM+ +
Sbjct: 424 CVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 4/174 (2%)
Query: 27 HSLLNVYQVDKAHNML----KYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
++L+N Y H M + M+ G + TYN LI G C+ + ++A ++++ K
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
L P+ T+ LI G C + FE+ M+ G P+ T+ +L+ CR
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
A + EM+R + ++ N +G+ L EM K FL + +
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFN 520
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 5/249 (2%)
Query: 28 SLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSP 87
SLL +VD A + M SP+ T N ++ GYCR+ + + + +L+DM + G
Sbjct: 212 SLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRA 271
Query: 88 DVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLF 147
+Y LI G C+ G L A ++K M G+ P+ T+ LI CR +L +A +F
Sbjct: 272 TDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 148 LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIH 207
EM V+P+ Y L+N Y +G+ A ++M+ +GI ++ YNA I
Sbjct: 332 GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV-----CNGIQRDILTYNALIF 386
Query: 208 GCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPL 267
G C + +A ++ + L P+ +++ +I G C + FEL M G
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHP 446
Query: 268 YEDIYQSLL 276
E + L+
Sbjct: 447 NEQTFNMLV 455
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 169/408 (41%), Gaps = 59/408 (14%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRG--------------------LSPDVD 90
S S+ T+ ++H + +FK A ILRD+ G +P V
Sbjct: 112 SHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV- 170
Query: 91 TYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM 150
+ L F K A + +M G LP ++ + +L +GR+ A + EM
Sbjct: 171 -FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 151 LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCC 210
R +SP+ Y +M+ YC G+ K ++L +M GF +S YN I G C
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVS-----YNTLIAGHC 284
Query: 211 VLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYED 270
G + AL + M GL P+VV++ +I GFC+ + +A ++ EM +
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVA---- 340
Query: 271 IYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKK 330
+ VTY+TLIN + QG+ A+ +M D + + I GL K+
Sbjct: 341 ---------PNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQ 391
Query: 331 ATTIEAKRSLVRWFYQDCLSIPAYRTYDTLI-ENCSNNEFKTVVGLVKDFSMRGLAHKAA 389
A T +A + V+ ++ L +P T+ LI C +R A +
Sbjct: 392 AKTRKAAQ-FVKELDKENL-VPNSSTFSALIMGQC----------------VRKNADRGF 433
Query: 390 KAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
+ + M+ P +N+L+ CR+ + A + +E V + +
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Query: 42 LKYMIVR-GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFC 100
LK M+ + G P+V T+N LIHG+CRA + +EA + +M ++P+ TY LI G+
Sbjct: 295 LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYS 354
Query: 101 QTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKY 160
Q G AF MV GI D TY LI LC++ + KA E+ +E + P+
Sbjct: 355 QQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSS 414
Query: 161 IYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALG 220
++ L+ C + + +L MI G P+ +N + C + A
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSMIR-----SGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 221 ILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
+LR M + D + V G G+ +L EM+ K
Sbjct: 470 VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 145/346 (41%), Gaps = 29/346 (8%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
+P V ++ L + +F+ A M G P V++ + G++ A
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
+M I P+ T +++ CR G+L K +L +M R G Y L+ +C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
KG S AL L + M+ K G+ P++V +N IHG C +++EA + M + +
Sbjct: 285 EKGLLSSALKLKN-MMGKS----GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIN 290
+P+ V+Y +I G+ + G+ AF +M GI D +TY+ LI
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQ-------------RDILTYNALIF 386
Query: 291 DFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRING--LNKKATT-IEAKRSLVRWFYQD 347
Q A E+ + + + + S I G + K A E +S++R
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIR---SG 443
Query: 348 CLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAH 392
C P +T++ L+ C N +F ++++ R + + H
Sbjct: 444 CH--PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH 487
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 9/230 (3%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GF P+V + N + R A+ R+M + +SP+ T ++ G+C++GKL K
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
E+ M G +Y LI C KG LS A L M + G+ P+ + L++
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 169 YCFKGEFSKALDLPDEM--INKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA 226
+C + +A + EM +N ++P+ V YN I+G G E A M
Sbjct: 318 FCRAMKLQEASKVFGEMKAVN-------VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
G+ D+++Y +I G CK + KA + E+D++ + + +L+
Sbjct: 371 CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L P+ + +H ++ +A + M +P+ TYN LI+GY + + A
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAF 363
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
DM G+ D+ TY LI G C+ K KA + ++ + ++P++ T+ LI+
Sbjct: 364 RFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQ 423
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINK 188
C + + F+L+ M+R G P++ + L++ +C +F A + EM+ +
Sbjct: 424 CVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 4/174 (2%)
Query: 27 HSLLNVYQVDKAHNML----KYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
++L+N Y H M + M+ G + TYN LI G C+ + ++A ++++ K
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
L P+ T+ LI G C + FE+ M+ G P+ T+ +L+ CR
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
A + EM+R + ++ N +G+ L EM K FL + +
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFN 520
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 179/390 (45%), Gaps = 46/390 (11%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRAD---RFKEAVGILRDMAKRGLSPDVDT 91
VD + +KY R F S+ + L+ + R+D + E +++ +A+ + P ++
Sbjct: 108 VDAILHQMKYETCR-FQESL--FLNLMRHFSRSDLHDKVMEMFNLIQVIAR--VKPSLNA 162
Query: 92 YYPLICGFCQTGKLGKAFEMKAKMVHK-GILPDADTYGILILTLCRKGRLSKAFDLFLEM 150
+ +G++ + ++ H G+ P+ + IL+ C+ G ++ AF + EM
Sbjct: 163 ISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEM 222
Query: 151 LREGVS-PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGC 209
R G+S P+ Y+ LM+ +A++L ++MI+K +GISP V +N I+G
Sbjct: 223 KRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISK----EGISPDPVTFNVMINGF 278
Query: 210 CVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYE 269
C G VE A IL M G +P+V +Y+ ++ GFCK+G+ +A + E+ + G+ L
Sbjct: 279 CRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKL-- 336
Query: 270 DIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNK 329
D V Y+TL+N F G +A L EM D + +V + GL+
Sbjct: 337 -----------DTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSS 385
Query: 330 KATTIEAKRSLVRWFYQDC-LSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKA 388
+ + EA + L +W + L+ +YR + C N E + V + S RG+
Sbjct: 386 EGRSEEALQMLDQWGSEGVHLNKGSYRIILNAL--CCNGELEKAVKFLSVMSERGIW--- 440
Query: 389 AKAHDKMLHGNYKPEGAIYNLLIFDHCRHG 418
P A +N L+ C G
Sbjct: 441 -------------PHHATWNELVVRLCESG 457
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 130/282 (46%), Gaps = 18/282 (6%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDM-AKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
P+ TY+ L+ R KEAV + DM +K G+SPD T+ +I GFC+ G++ +A +
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
+ M G P+ Y L+ C+ G++ +A F E+ + G+ YT LMN +C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
GE +A+ L EM D ++ YN + G GR EEAL +L G+
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLT-----YNVILRGLSSEGRSEEALQMLDQWGSEGV 404
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD----EVTYS 286
+ SY ++ C GE KA + M E+GI + + L+ L + E+
Sbjct: 405 HLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVR 464
Query: 287 TLINDFH--------AQGNLMDAYCLESEMSEYSYLTDDVIS 320
LI + G ++++ C E ++ L D ++S
Sbjct: 465 VLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 5/242 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD ++ +V++A +L +M G +P+V Y+ L++G+C+ + +EA
Sbjct: 264 ISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAK 323
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
++ K GL D Y L+ FC+ G+ +A ++ +M D TY +++ L
Sbjct: 324 QTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGL 383
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+GR +A + + EGV +K Y ++N C GE KA+ M + G
Sbjct: 384 SSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSER-----G 438
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
I P +N + C G E + +L G +GL P S+ V++ CK + V F
Sbjct: 439 IWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVF 498
Query: 255 EL 256
EL
Sbjct: 499 EL 500
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 4/164 (2%)
Query: 28 SLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
+L+N + + D+A +L M TYN ++ G R +EA+ +L
Sbjct: 343 TLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSE 402
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
G+ + +Y ++ C G+L KA + + M +GI P T+ L++ LC G
Sbjct: 403 GVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIG 462
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
+ + LR G+ P + ++ C + + +L D +++
Sbjct: 463 VRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 178/444 (40%), Gaps = 46/444 (10%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFS-PSVATYNELIHGYCRADRFKEAVG 75
P S + L+ Q +K H + M G P TY+ LI Y + R A+
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+ +M + P Y L+ + + GK+ KA ++ +M G P TY LI L
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
+ GR+ +A+ + +MLR+G++P LMN G + ++ EM G
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEM---GMWR--C 369
Query: 196 SPSLVIYNARIHGCC-VLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+P++V YN I V E M +SP +Y+ +I G+CK KA
Sbjct: 370 TPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKAL 429
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDL--------SDEV--------------TYSTLINDF 292
L EMDEKG P Y SL++ L ++E+ Y+ +I F
Sbjct: 430 LLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHF 489
Query: 293 HAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIP 352
G L +A L +EM D + ++G+ KA I SL+R
Sbjct: 490 GKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM-VKAGMINEANSLLR---------- 538
Query: 353 AYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIF 412
+ EN + + ++ F+ G+ +A + + + H KP+G YN L+
Sbjct: 539 ------KMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLG 592
Query: 413 DHCRHGNVHKAYDMYKETVHSGVE 436
G +A M +E G E
Sbjct: 593 CFAHAGMFEEAARMMREMKDKGFE 616
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 151/378 (39%), Gaps = 89/378 (23%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ P E+ + + V +V+KA ++ + M G SP+V TY ELI G +A R EA
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAY 323
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK--------------------------A 108
G +DM + GL+PDV L+ + G++ +
Sbjct: 324 GFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL 383
Query: 109 FEMKA----------KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPH 158
FE KA KM + P TY ILI C+ R+ KA L EM +G P
Sbjct: 384 FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPC 443
Query: 159 KYIYTRLMNYY-----------CFK------------------------GEFSKALDLPD 183
Y L+N FK G+ S+A+DL +
Sbjct: 444 PAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFN 503
Query: 184 EMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
EM N+G PD + YNA + G G + EA +LR M + G D+ S+ ++ G
Sbjct: 504 EMKNQGSGPD-----VYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNG 558
Query: 244 FCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYC 303
F + G P +A E+ + GI D VTY+TL+ F G +A
Sbjct: 559 FARTGVPRRAIEMFETIKHSGIK-------------PDGVTYNTLLGCFAHAGMFEEAAR 605
Query: 304 LESEMSEYSYLTDDVISS 321
+ EM + + D + S
Sbjct: 606 MMREMKDKGFEYDAITYS 623
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 166/411 (40%), Gaps = 52/411 (12%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
S S A +EL+ RA +A+ + R P TY +I Q G+ K E
Sbjct: 159 SVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHE 218
Query: 111 MKAKMVHKG-ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
+ +M ++G PD TY LI + + GR A LF EM + P + IYT L+ Y
Sbjct: 219 VYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIY 278
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
G+ KALDL +EM G SP++ Y I G GRV+EA G + M G
Sbjct: 279 FKVGKVEKALDLFEEMKRA-----GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG 333
Query: 230 LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG-------IPLYEDIYQSLLDDLS-- 280
L+PDVV N++ K+G + EL E G + Y + ++L + +
Sbjct: 334 LTPDVVFLNNLMNILGKVG---RVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHV 390
Query: 281 -----------------DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVR 323
E TYS LI+ + + A L EM E +
Sbjct: 391 SEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 450
Query: 324 INGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRG 383
IN L K AKR Y+ A + L EN N + ++K F G
Sbjct: 451 INALGK------AKR------YE-----AANELFKELKENFGNVSSRVYAVMIKHFGKCG 493
Query: 384 LAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
+A ++M + P+ YN L+ + G +++A + ++ +G
Sbjct: 494 KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 5/248 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
V + + M SPS TY+ LI GYC+ +R ++A+ +L +M ++G P Y
Sbjct: 389 HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI + + A E+ ++ + Y ++I + G+LS+A DLF EM +
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G P Y Y LM+ G ++A L +M G D S ++++ +G G
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL-----NGFARTG 563
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
A+ + + G+ PD V+Y ++ F G +A + EM +KG Y
Sbjct: 564 VPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYS 623
Query: 274 SLLDDLSD 281
S+LD + +
Sbjct: 624 SILDAVGN 631
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 110/231 (47%), Gaps = 5/231 (2%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
KA + P E + +V+KA +L+ M +GF P A Y LI+ +A R+
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
+ A + +++ + + Y +I F + GKL +A ++ +M ++G PD Y L
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
+ + + G +++A L +M G + ++N + G +A+++ + + + G
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI 241
PDG++ YN + G EEA ++R M D G D ++Y++++
Sbjct: 581 KPDGVT-----YNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 1 MMITASCKNN---KAVIL--DPDERNL-------LSQVHSLLNVYQVDKAHNMLKYMIVR 48
++I CK N KA++L + DE+ S +++L + + A+ + K +
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
+ S Y +I + + + EAV + +M +G PDV Y L+ G + G + +A
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEA 533
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ KM G D +++ I++ R G +A ++F + G+ P Y L+
Sbjct: 534 NSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGC 593
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
+ G F +A + EM +KGF D I+ S ++
Sbjct: 594 FAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 5/239 (2%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+HSLL V Q + + M+ GF+P V TYN ++ R + +L +M K G
Sbjct: 229 LHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGF 288
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
SPD+ TY L+ K A + M G+ P + LI L R G+L
Sbjct: 289 SPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKY 348
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
E ++ G +P YT ++ Y GE KA ++ EM KG LP+ + YN+
Sbjct: 349 FMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN-----VFTYNSM 403
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
I G C+ G+ +EA +L+ M G +P+ V Y+ ++ G+ ++A E+ +M EKG
Sbjct: 404 IRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 18/261 (6%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
+ P +YN ++H ++K + M + G +PDV TY ++ + GK + +
Sbjct: 218 YRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLY 277
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
+ +MV G PD TY IL+ L + A +L M GV P +T L++
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
G+ DE + G PD +V Y I G G +E+A + + M + G
Sbjct: 338 SRAGKLEACKYFMDETVKVGCTPD-----VVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 230 LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLI 289
P+V +Y ++I+GFC G+ +A L EM+ +G + V YSTL+
Sbjct: 393 QLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCN-------------PNFVVYSTLV 439
Query: 290 NDFHAQGNLMDAYCLESEMSE 310
N+ G +++A+ + +M E
Sbjct: 440 NNLKNAGKVLEAHEVVKDMVE 460
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
+ V ++P + + + L +++ + + G +P V Y +I GY
Sbjct: 319 REVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGEL 378
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
++A + ++M ++G P+V TY +I GFC GK +A + +M +G P+ Y L
Sbjct: 379 EKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTL 438
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPH 158
+ L G++ +A ++ +M+ +G H
Sbjct: 439 VNNLKNAGKVLEAHEVVKDMVEKGHYVH 466
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 166/430 (38%), Gaps = 46/430 (10%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
KA +L G S AT +I + R EA + ++ + G+ P Y L+
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
G+ +TG L A M ++M +G+ PD TY +LI GR A + EM V
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P+ ++++RL+ + +GE+ K + EM + G PD YN I ++
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDR-----QFYNVVIDTFGKFNCLD 461
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
A+ M G+ PD V++ +I CK G + A E+ M+ +G Y ++
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Query: 277 DDLSDE----------------------VTYSTLINDFHAQGNLMDAY-CLESEMSEYSY 313
+ D+ VT++TL++ + G DA CLE
Sbjct: 522 NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE------- 574
Query: 314 LTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVV 373
+ SV GL +T A L+ + Q LS A + + + +
Sbjct: 575 -----MKSV---GLKPSSTMYNA---LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALN 623
Query: 374 GLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHS 433
L+ F +A M KP+ Y L+ R K +Y+E + S
Sbjct: 624 SLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMS 683
Query: 434 GVEIGRAEPS 443
G + R S
Sbjct: 684 GCKPDRKARS 693
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 9/242 (3%)
Query: 8 KNNKAVILDPDER--NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYC 65
K K++ + PD + N++ N +D A M+ G P T+N LI +C
Sbjct: 433 KEMKSIGVKPDRQFYNVVIDTFGKFNC--LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 66 RADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDAD 125
+ R A + M +RG P TY +I + + + KM +GILP+
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 126 TYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEM 185
T+ L+ + GR + A + EM G+ P +Y L+N Y +G +A++ M
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM 610
Query: 186 INKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFC 245
+ DG+ PSL+ N+ I+ R EA +L+ M + G+ PDVV+YT ++K
Sbjct: 611 TS-----DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALI 665
Query: 246 KI 247
++
Sbjct: 666 RV 667
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 43/305 (14%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PDE + + +N + + A +LK M P+ ++ L+ G+ +++
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L++M G+ PD Y +I F + L A +M+ +GI PD T+ LI
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD- 193
C+ GR A ++F M R G P Y ++N Y + + L +M ++G LP+
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 194 -----------------------------GISPSLVIYNARIHGCCVLGRVEEALGILRG 224
G+ PS +YNA I+ G E+A+ R
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT 284
M GL P +++ ++I F + +AF + M E G+ D VT
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVK-------------PDVVT 656
Query: 285 YSTLI 289
Y+TL+
Sbjct: 657 YTTLM 661
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 148/385 (38%), Gaps = 52/385 (13%)
Query: 57 YNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMV 116
Y+ LIH R+++ EA + + K+ L+P TY LI + + KA + AKM
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQ---KQTLTPL--TYNALIGACARNNDIEKALNLIAKMR 224
Query: 117 HKGILPDADTYGILILTLCRKGRLSKA--FDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
G D Y ++I +L R ++ L+ E+ R+ + + ++ + G+
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 175 FSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
SKAL L G+S + I GR EA + + G+ P
Sbjct: 285 PSKALQLLGMA-----QATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRT 339
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHA 294
+Y ++KG+ K G A + EM+++G+ DE TYS LI+ +
Sbjct: 340 RAYNALLKGYVKTGPLKDAESMVSEMEKRGVS-------------PDEHTYSLLIDAYVN 386
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
G A + EM + + S + G + W
Sbjct: 387 AGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG----------EW----------Q 426
Query: 355 RTYDTLIENCS-----NNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNL 409
+T+ L E S + +F VV + F A D+ML +P+ +N
Sbjct: 427 KTFQVLKEMKSIGVKPDRQFYNVV--IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 410 LIFDHCRHGNVHKAYDMYKETVHSG 434
LI HC+HG A +M++ G
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRG 509
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
D +L M +G P+V T+ L+ Y ++ RF +A+ L +M GL P Y L
Sbjct: 531 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 590
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
I + Q G +A M G+ P LI R ++AF + M GV
Sbjct: 591 INAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 650
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
P YT LM +F K + +EMI G PD + S++
Sbjct: 651 KPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q+D A +L M V+ P+V +Y+ +I G+ +A RF EA+ + +M G++ D +Y
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ + + G+ +A ++ +M GI D TY L+ ++G+ + +F EM RE
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
V P+ Y+ L++ Y G + +A+++ E + G D +V+Y+A I C G
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD-----VVLYSALIDALCKNG 563
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCK 246
V A+ ++ M G+SP+VV+Y ++I F +
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 157/328 (47%), Gaps = 21/328 (6%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRAD-RFKEAVGILRDMAKRGLSPDVDTYYP 94
++A ++ M G P++ TYN +I + FK+ +M + G+ PD T+
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
L+ + G A + +M ++ I D +Y L+ +C+ G++ AF++ +M +
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+ P+ Y+ +++ + G F +AL+L EM G D +S YN + +GR
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS-----YNTLLSIYTKVGR 459
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
EEAL ILR MA +G+ DVV+Y ++ G+ K G+ + ++ EM + +
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV--------- 510
Query: 275 LLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTI 334
L + +TYSTLI+ + G +A + E D V+ S I+ L K +
Sbjct: 511 ----LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG-LV 565
Query: 335 EAKRSLVRWFYQDCLSIPAYRTYDTLIE 362
+ SL+ ++ +S P TY+++I+
Sbjct: 566 GSAVSLIDEMTKEGIS-PNVVTYNSIID 592
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 18/288 (6%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
M G P T+N L+ R ++ A + +M R + DV +Y L+ C+ G+
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
+ AFE+ A+M K I+P+ +Y +I + GR +A +LF EM G++ + Y
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
L++ Y G +ALD+ EM + G D +V YNA + G G+ +E +
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKD-----VVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT 284
M + P++++Y+ +I G+ K G +A E+ E G+ +D V
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL-------------RADVVL 551
Query: 285 YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKAT 332
YS LI+ G + A L EM++ + V + I+ + AT
Sbjct: 552 YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 112/249 (44%), Gaps = 5/249 (2%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
+ A N+ M R V +YN L+ C+ + A IL M + + P+V +Y +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
I GF + G+ +A + +M + GI D +Y L+ + GR +A D+ EM G+
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRV 215
Y L+ Y +G++ + + EM + LP+ L+ Y+ I G G
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN-----LLTYSTLIDGYSKGGLY 530
Query: 216 EEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSL 275
+EA+ I R GL DVV Y+ +I CK G A L EM ++GI Y S+
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 276 LDDLSDEVT 284
+D T
Sbjct: 591 IDAFGRSAT 599
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 28/239 (11%)
Query: 27 HSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
++LL++Y + ++A ++L+ M G V TYN L+ GY + ++ E + +M +
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
+ P++ TY LI G+ + G +A E+ + G+ D Y LI LC+ G +
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP----- 197
A L EM +EG+SP+ Y +++ + S +D + N G LP S
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFG----RSATMDRSADYSNGGSLPFSSSALSALT 623
Query: 198 ----SLVIY---------NARIHGCCVLGRVEEA--LGILRGMADMGLSPDVVSYTNVI 241
+ VI N R C G E + L + R M + + P+VV+++ ++
Sbjct: 624 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAIL 682
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 9/250 (3%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V + +L+ M R P T+N L G+CR K+A+ +L +M + G P+ TY
Sbjct: 250 VKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCA 308
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKG---ILPDADTYGILILTLCRKGRLSKAFDLFLEML 151
I FCQ G + +A ++ M+ KG P A T+ ++I+ L + + + F+L M+
Sbjct: 309 AIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMI 368
Query: 152 REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCV 211
G P Y ++ C + +A DEM NKG+ PD +V YN + C
Sbjct: 369 STGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD-----IVTYNCFLRVLCE 423
Query: 212 LGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDI 271
+ +EAL + M + +P V +Y +I F ++ +P AF EMD++ +
Sbjct: 424 NRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVET 483
Query: 272 YQSLLDDLSD 281
Y ++++ L D
Sbjct: 484 YCAMINGLFD 493
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 138/315 (43%), Gaps = 26/315 (8%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
P + +N L+ C+ KE +LR M R + PD +T+ L G+C+ KA +
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG---VSPHKYIYTRLMN 167
+ +M+ G P+ TY I T C+ G + +A DLF M+ +G +P + ++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 168 YYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMAD 227
+ + +L MI+ G LPD + Y I G C+ +V+EA L M++
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPD-----VSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 228 MGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE-KGIPLYEDIYQSLLDDLSDEVTYS 286
G PD+V+Y ++ C+ + +A +L M E + P + TY+
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQ--------------TYN 450
Query: 287 TLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQ 346
LI+ F + A+ +EM + + D INGL EA L+
Sbjct: 451 MLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEAC-FLLEEVVN 509
Query: 347 DCLSIPAYRTYDTLI 361
L +P YR +D+ +
Sbjct: 510 KGLKLP-YRVFDSFL 523
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 8/217 (3%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFS---PSVATYNELIHGYCRADRFKEA 73
P+ + + + VD+A ++ +MI +G + P+ T+ +I + D+ +E
Sbjct: 301 PENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEEC 360
Query: 74 VGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
++ M G PDV TY +I G C K+ +A++ +M +KG PD TY +
Sbjct: 361 FELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRV 420
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
LC + +A L+ M+ +P Y L++ + + A + EM + + D
Sbjct: 421 LCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQD 480
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
+ Y A I+G R +EA +L + + GL
Sbjct: 481 -----VETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 5/206 (2%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P + + +L + ++ ++ MI G P V+TY ++I G C A++ EA
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L +M+ +G PD+ TY + C+ K +A ++ +MV P TY +LI
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFE 458
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMN--YYCFKGEFSKALDLPDEMINKGF-LPD 193
AF+ + EM + Y ++N + C + + +A L +E++NKG LP
Sbjct: 459 MDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAK--EACFLLEEVVNKGLKLPY 516
Query: 194 GISPSLVIYNARIHGCCVLGRVEEAL 219
+ S ++ + + + +V E +
Sbjct: 517 RVFDSFLMRLSEVGNLKAIHKVSEHM 542
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 167/392 (42%), Gaps = 40/392 (10%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMI-VRGFSPSVATYNELIHGYCRADR 69
K + + P S + LL + AH++ M G +P T+N LI+G+C+
Sbjct: 165 KQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSM 224
Query: 70 FKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG--ILPDADTY 127
EA I +DM +PDV TY +I G C+ GK+ A + + M+ K + P+ +Y
Sbjct: 225 VDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSY 284
Query: 128 GILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKG--EFSKALDLPDEM 185
L+ C K + +A +F +ML G+ P+ Y L+ KG E + ++ D +
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI-----KGLSEAHRYDEIKDIL 339
Query: 186 INKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFC 245
I +P +N I C G ++ A+ + + M +M L PD SY+ +I+ C
Sbjct: 340 IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 399
Query: 246 KIGEPVKAFELKLEMDEKGI---------------PLY------------EDIYQSLLDD 278
E +A L E+ EK + P++ E +++ L+
Sbjct: 400 MRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKR 459
Query: 279 -LSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAK 337
+ D +Y TLI +G AY L M ++ D + I+GL K + A
Sbjct: 460 GVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAH 519
Query: 338 RSLVRWFYQDCLSIPAYRTYDTLIENCSNNEF 369
+L R L P T+ +++ + +F
Sbjct: 520 DTLQRMLRSSYL--PVATTFHSVLAELAKRKF 549
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 157/381 (41%), Gaps = 46/381 (12%)
Query: 57 YNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMV 116
+N LI Y A F+E+V + + M + G+SP V T+ L+ + G+ G A ++ +M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 117 HK-GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
G+ PD+ T+ LI C+ + +AF +F +M +P Y +++ C G+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
A ++ M+ K + P++V Y + G C+ ++EA+ + M GL P+ V
Sbjct: 261 KIAHNVLSGMLKKA---TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAV 317
Query: 236 SYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS----DEVTYSTLIND 291
+Y +IKG + E + E+K DI D + D T++ LI
Sbjct: 318 TYNTLIKG---LSEAHRYDEIK------------DILIGGNDAFTTFAPDACTFNILIKA 362
Query: 292 FHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCL-- 349
G+L A + EM D SV I L + A+ F ++ L
Sbjct: 363 HCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG 422
Query: 350 ---SIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGA 405
P Y+ + E C+N + K + + RG+ +
Sbjct: 423 KDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPS---------------- 466
Query: 406 IYNLLIFDHCRHGNVHKAYDM 426
Y LI HCR G AY++
Sbjct: 467 -YKTLITGHCREGKFKPAYEL 486
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 170/400 (42%), Gaps = 42/400 (10%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR--GLSPDVDTYY-PLICGFCQTGK 104
+GFS ++ ++ RA A L + +R G D Y+ LI + G
Sbjct: 94 KGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGL 153
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE-GVSPHKYIYT 163
++ ++ M GI P T+ L+ L ++GR A DLF EM R GV+P Y +
Sbjct: 154 FQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFN 213
Query: 164 RLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILR 223
L+N +C +A + +M PD +V YN I G C G+V+ A +L
Sbjct: 214 TLINGFCKNSMVDEAFRIFKDMELYHCNPD-----VVTYNTIIDGLCRAGKVKIAHNVLS 268
Query: 224 GMADMG--LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD 281
GM + P+VVSYT +++G+C E +A + +M +G+ Y +L+ LS+
Sbjct: 269 GMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE 328
Query: 282 EVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLV 341
Y I D GN DA+ ++ D ++ I + A ++A +
Sbjct: 329 AHRYDE-IKDILIGGN--DAFT--------TFAPDACTFNILIKA-HCDAGHLDAAMKV- 375
Query: 342 RWFYQDCLSI---PAYRTYDTLIEN-CSNNEFKTVVGLVKD-FSMRGLAHKAAKAHDKML 396
+Q+ L++ P +Y LI C NEF L + F L K
Sbjct: 376 ---FQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGK--------- 423
Query: 397 HGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
KP A YN + C +G +A ++++ + GV+
Sbjct: 424 -DECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ 462
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 116/259 (44%), Gaps = 14/259 (5%)
Query: 11 KAVILDPDERNLLSQVHSLLNVY-----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYC 65
K V+L DE L+ ++ + Y + +A + + ++ RG +Y LI G+C
Sbjct: 417 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP-PSYKTLITGHC 475
Query: 66 RADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDAD 125
R +FK A +L M +R PD++TY LI G + G+ A + +M+ LP A
Sbjct: 476 REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 535
Query: 126 TYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEM 185
T+ ++ L ++ +++F L ML + + + + T+++ + KA + +
Sbjct: 536 TFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLL 595
Query: 186 INKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFC 245
+ G+ LV + C ++ +A ++ + D+ + VI+G C
Sbjct: 596 YDNGY--------LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLC 647
Query: 246 KIGEPVKAFELKLEMDEKG 264
K +AF L E+ E G
Sbjct: 648 KHKRHSEAFSLYNELVELG 666
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 175/414 (42%), Gaps = 37/414 (8%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D R+ ++ L+ + +AH++ +I G PS+ TY L+ R F + ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
+ K GL PD + +I ++G L +A ++ KM G P A T+ LI +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 138 GRLSKAFDLFLEMLR-EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G+L ++ L MLR E + P+ L+ +C + + +A ++ +M + G PD ++
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 197 -PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
+L ARI C + I+ M + P+V + ++ G+C+ G+ +A
Sbjct: 498 FNTLAKAYARIGSTCTAEDM-----IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALR 552
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLT 315
M E G+ ++ SL+ + IND G ++D M E+
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFLN-------INDMDGVGEVVDL------MEEFGVKP 599
Query: 316 DDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGL 375
D V S +N ++ + KR C I Y ++E + + L
Sbjct: 600 DVVTFSTLMNAW---SSVGDMKR---------CEEI-----YTDMLEGGIDPDIHAFSIL 642
Query: 376 VKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKE 429
K ++ G KA + ++M +P IY +I C G + KA +YK+
Sbjct: 643 AKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKK 696
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 134/301 (44%), Gaps = 42/301 (13%)
Query: 14 ILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNEL------------- 60
+L P++R V + N ++++A N++ M G P V T+N L
Sbjct: 455 MLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA 514
Query: 61 -----------------------IHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
++GYC + +EA+ M + G+ P++ + LI
Sbjct: 515 EDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK 574
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
GF + E+ M G+ PD T+ L+ G + + +++ +ML G+ P
Sbjct: 575 GFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP 634
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+ ++ L Y GE KA + ++M + F G+ P++VIY I G C G +++
Sbjct: 635 DIHAFSILAKGYARAGEPEKAEQILNQM--RKF---GVRPNVVIYTQIISGWCSAGEMKK 689
Query: 218 ALGILRGMADM-GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
A+ + + M + GLSP++ +Y +I GF + +P KA EL +M+ K + Q +
Sbjct: 690 AMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIA 749
Query: 277 D 277
D
Sbjct: 750 D 750
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 4/234 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ P+ R + V+ ++++A M G P++ +N LI G+ +
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
++ M + G+ PDV T+ L+ + G + + E+ M+ GI PD + IL
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
R G KA + +M + GV P+ IYT++++ +C GE KA+ + +M G + G
Sbjct: 647 ARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMC--GIV--G 702
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
+SP+L Y I G + +A +L+ M + P + + G+ IG
Sbjct: 703 LSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 144/328 (43%), Gaps = 59/328 (17%)
Query: 21 NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM 80
N++ ++H+ N VD+A + M P TY+ LI+ + RA +++ A+ ++ DM
Sbjct: 147 NMMIRLHARHN--WVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 81 AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG--------------------- 119
+ ++P TY LI +G +A E+ KM G
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 120 --------------ILPDADTYGILILTLCRKGRLSKAFDLFLEML--REGVSPHKYIYT 163
+ PD T+ I+I L + G+ S+A DLF M R P +T
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 164 RLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILR 223
+M+ Y KGE + + M+ +G+ P++V YNA + V G AL +L
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMV-----AEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 224 GMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM-DEKGIPLYEDIYQSLLDDLSDE 282
+ G+ PDVVSYT ++ + + +P KA E+ L M E+ P +
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP--------------NV 425
Query: 283 VTYSTLINDFHAQGNLMDAYCLESEMSE 310
VTY+ LI+ + + G L +A + +M +
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 146/335 (43%), Gaps = 27/335 (8%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD S +H +++ + + M+ G P++ +YN L+ Y A+ +
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L D+ + G+ PDV +Y L+ + ++ + GKA E+ M + P+ TY LI
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G L++A ++F +M ++G+ P+ L+ C + + +D + GI+
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLL-AACSRSKKKVNVD----TVLSAAQSRGIN 492
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
+ YN+ I +E+A+ + + M + D V++T +I G C++ + +A
Sbjct: 493 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 552
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLS----------------------DEVTYSTLINDFHA 294
EM++ IPL +++Y S+L S D + Y+++++ ++A
Sbjct: 553 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 612
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNK 329
A L EM D + S + NK
Sbjct: 613 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 7/257 (2%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
S + S +N +++KA + + M + T+ LI G CR ++ EA+ L++M
Sbjct: 500 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 559
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
+ + Y ++C + + G++ +A + +M G PD Y ++ + KA
Sbjct: 560 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 619
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
+LFLEM G+ P + LM + G+ S L D M K G ++
Sbjct: 620 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTG-----AVFF 674
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTN-VIKGFCKIGEPVKAFELKLEMDE 262
C L + A+ +++ M D L + TN ++ F K G+ +L ++
Sbjct: 675 EIFSACNTLQEWKRAIDLIQ-MMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIA 733
Query: 263 KGIPLYEDIYQSLLDDL 279
G+ + Y LL+ L
Sbjct: 734 SGVGINLKTYAILLEHL 750
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 135/345 (39%), Gaps = 46/345 (13%)
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
+ K D Y ++I R + +A LF EM + P Y L+N + G++
Sbjct: 135 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 194
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
A++L D+M L I+PS YN I+ C G EAL + + M D G+ PD+V
Sbjct: 195 RWAMNLMDDM-----LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 249
Query: 236 SYTNVIKGFCKIGEPVKA---FEL---------------------KLEMDEKGIPLYEDI 271
++ V+ + + KA FEL KL + + L+ +
Sbjct: 250 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Query: 272 YQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKA 331
+ + D VT++++++ + +G + + V ++ GL
Sbjct: 310 REKRAECRPDVVTFTSIMHLYSVKGEIENCRA--------------VFEAMVAEGLKPNI 355
Query: 332 TTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKA 391
+ A L+ + +S A + +N + + L+ + KA +
Sbjct: 356 VSYNA---LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 392 HDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
M KP YN LI + +G + +A +++++ G++
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 457
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 145/331 (43%), Gaps = 59/331 (17%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D N++ ++H+ N VD+A + M P TY+ LI+ + RA +++ A+ ++
Sbjct: 12 DIYNMMIRLHARHN--WVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLM 69
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG------------------ 119
DM + ++P TY LI +G +A E+ KM G
Sbjct: 70 DDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSG 129
Query: 120 -----------------ILPDADTYGILILTLCRKGRLSKAFDLFLEML--REGVSPHKY 160
+ PD T+ I+I L + G+ S+A DLF M R P
Sbjct: 130 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 189
Query: 161 IYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALG 220
+T +M+ Y KGE + + M+ +G+ P++V YNA + V G AL
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAMV-----AEGLKPNIVSYNALMGAYAVHGMSGTALS 244
Query: 221 ILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM-DEKGIPLYEDIYQSLLDDL 279
+L + G+ PDVVSYT ++ + + +P KA E+ L M E+ P
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP------------- 291
Query: 280 SDEVTYSTLINDFHAQGNLMDAYCLESEMSE 310
+ VTY+ LI+ + + G L +A + +M +
Sbjct: 292 -NVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 146/335 (43%), Gaps = 27/335 (8%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD S +H +++ + + M+ G P++ +YN L+ Y A+ +
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L D+ + G+ PDV +Y L+ + ++ + GKA E+ M + P+ TY LI
Sbjct: 246 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 305
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G L++A ++F +M ++G+ P+ L+ C + + +D + GI+
Sbjct: 306 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLL-AACSRSKKKVNVD----TVLSAAQSRGIN 360
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
+ YN+ I +E+A+ + + M + D V++T +I G C++ + +A
Sbjct: 361 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 420
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLS----------------------DEVTYSTLINDFHA 294
EM++ IPL +++Y S+L S D + Y+++++ ++A
Sbjct: 421 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 480
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNK 329
A L EM D + S + NK
Sbjct: 481 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 515
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 7/257 (2%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
S + S +N +++KA + + M + T+ LI G CR ++ EA+ L++M
Sbjct: 368 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 427
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
+ + Y ++C + + G++ +A + +M G PD Y ++ + KA
Sbjct: 428 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 487
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
+LFLEM G+ P + LM + G+ S L D M K G ++
Sbjct: 488 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTG-----AVFF 542
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTN-VIKGFCKIGEPVKAFELKLEMDE 262
C L + A+ +++ M D L + TN ++ F K G+ +L ++
Sbjct: 543 EIFSACNTLQEWKRAIDLIQ-MMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIA 601
Query: 263 KGIPLYEDIYQSLLDDL 279
G+ + Y LL+ L
Sbjct: 602 SGVGINLKTYAILLEHL 618
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 135/345 (39%), Gaps = 46/345 (13%)
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
+ K D Y ++I R + +A LF EM + P Y L+N + G++
Sbjct: 3 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 62
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
A++L D+M L I+PS YN I+ C G EAL + + M D G+ PD+V
Sbjct: 63 RWAMNLMDDM-----LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 117
Query: 236 SYTNVIKGFCKIGEPVKA---FEL---------------------KLEMDEKGIPLYEDI 271
++ V+ + + KA FEL KL + + L+ +
Sbjct: 118 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 177
Query: 272 YQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKA 331
+ + D VT++++++ + +G + + V ++ GL
Sbjct: 178 REKRAECRPDVVTFTSIMHLYSVKGEIENCRA--------------VFEAMVAEGLKPNI 223
Query: 332 TTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKA 391
+ A L+ + +S A + +N + + L+ + KA +
Sbjct: 224 VSYNA---LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 392 HDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
M KP YN LI + +G + +A +++++ G++
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 325
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 169/425 (39%), Gaps = 76/425 (17%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G + TY ++ CR +EA +L + + V Y I G C TG+ KA
Sbjct: 211 GLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLCVTGETEKA 264
Query: 109 FEMKAKMVHKGILPDAD---TYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRL 165
+ +++ + L D G+++ C + ++ A + +EM G Y +
Sbjct: 265 VALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAV 324
Query: 166 MNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI------------------------ 201
++ YC +AL D+M+ KG + + SL++
Sbjct: 325 IDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNI 384
Query: 202 ------YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
YN LGRVEEA +L+ M D G+ PDV++YT +I G+C G+ V A +
Sbjct: 385 FLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD 444
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLT 315
L EM G+ D +TY+ L++ G+ + + M
Sbjct: 445 LIDEMIGNGMS-------------PDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKP 491
Query: 316 DDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGL 375
+ V +SV I GL EA+ + +L + C N+
Sbjct: 492 NAVTNSVIIEGLCFARKVKEAE-----------------DFFSSLEQKCPENK----ASF 530
Query: 376 VKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
VK + GL+ KA KA ++ Y ++Y L F C G + KA+D+ K+ V
Sbjct: 531 VKGYCEAGLSKKAYKAFVRL---EYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRV 587
Query: 436 EIGRA 440
E GR+
Sbjct: 588 EPGRS 592
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 189/495 (38%), Gaps = 67/495 (13%)
Query: 1 MMITASCKNNKAVILDPDERNLLSQ----------VHSLLNVYQVDKAHNMLKYMIVRGF 50
+ +T + A+IL+ +R L+ V N ++ A +++ M GF
Sbjct: 255 LCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGF 314
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
V +I YC+ EA+G L M +GL + ++ +C+ +A E
Sbjct: 315 GLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALE 374
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
+ I D Y + L + GR+ +AF+L EM G+ P YT L++ YC
Sbjct: 375 KFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYC 434
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
+G+ ALDL DEMI +G+SP L+ YN + G G EE L I M G
Sbjct: 435 LQGKVVDALDLIDEMIG-----NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGP 489
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIP--------------LYEDIYQSL- 275
P+ V+ + +I+G C VK E E+ P L + Y++
Sbjct: 490 KPNAVTNSVIIEGLC-FARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFV 548
Query: 276 -LDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTI 334
L+ + Y L +G L A+ + +MS Y + I K
Sbjct: 549 RLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVR 608
Query: 335 EAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGL--------- 384
EA+ L + L IP TY +I C NE + L +D RG+
Sbjct: 609 EAQ-VLFDTMVERGL-IPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTV 666
Query: 385 -----------------------AHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVH 421
KA++ + + Y +LI C+ N+
Sbjct: 667 LLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLE 726
Query: 422 KAYDMYKETVHSGVE 436
+A +++ + SG+E
Sbjct: 727 QAAELFDRMIDSGLE 741
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 15/224 (6%)
Query: 55 ATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAK 114
+ Y +L C ++A +L+ M+ + P +I FC+ + +A +
Sbjct: 557 SVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDT 616
Query: 115 MVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY----- 169
MV +G++PD TY I+I T CR L KA LF +M + G+ P YT L++ Y
Sbjct: 617 MVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDP 676
Query: 170 ------CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILR 223
+GE K + + F GI +V Y I C + +E+A +
Sbjct: 677 EHHETCSVQGEVGKR---KASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFD 733
Query: 224 GMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK-GIP 266
M D GL PD+V+YT +I + + G A L E+ +K IP
Sbjct: 734 RMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIP 777
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 13/171 (7%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V +A + M+ RG P + TY +IH YCR + ++A + DM +RG+ PDV TY
Sbjct: 607 VREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTV 666
Query: 95 LICGFCQ-----------TGKLG--KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLS 141
L+ + + G++G KA E+ + GI D Y +LI C+ L
Sbjct: 667 LLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLE 726
Query: 142 KAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLP 192
+A +LF M+ G+ P YT L++ Y KG A+ L E+ K +P
Sbjct: 727 QAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIP 777
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 135/323 (41%), Gaps = 50/323 (15%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR---------------GLSPDV 89
M G P+ T + +I G C A + KEA + ++ GLS
Sbjct: 484 MKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKA 543
Query: 90 -------------DTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
Y L C G L KA ++ KM + P G +I C+
Sbjct: 544 YKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCK 603
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
+ +A LF M+ G+ P + YT +++ YC E KA L ++M +G PD ++
Sbjct: 604 LNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVT 663
Query: 197 PSLVI-----YNARIH-GCCVLGRV--EEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
++++ + H C V G V +A +LR + G+ DVV YT +I CK+
Sbjct: 664 YTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMN 723
Query: 249 EPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
+A EL M + G+ D V Y+TLI+ + +G + A L +E+
Sbjct: 724 NLEQAAELFDRMIDSGLE-------------PDMVAYTTLISSYFRKGYIDMAVTLVTEL 770
Query: 309 S-EYSYLTDDVISSVRINGLNKK 330
S +Y+ ++ ++V+ L K
Sbjct: 771 SKKYNIPSESFEAAVKSAALKAK 793
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 13/180 (7%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
++KAH++LK M P + ++I +C+ + +EA + M +RGL PD+ TY
Sbjct: 572 LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTI 631
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILI-----------LTLCRKGRLS-- 141
+I +C+ +L KA + M +GI PD TY +L+ T +G +
Sbjct: 632 MIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKR 691
Query: 142 KAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
KA ++ E G+ YT L++ C +A +L D MI+ G PD ++ + +I
Sbjct: 692 KASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLI 751
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 179/425 (42%), Gaps = 53/425 (12%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G T+ L+ G C+A R +E + IL+ M + PDV Y +I G L +
Sbjct: 258 GLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDAS 317
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ +M I PD YG L++ LC+ GR+ + ++LF+EM + + + IY L+
Sbjct: 318 LRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEG 377
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+ G+ A +L +++++ G++ D + IYNA I G C + +V++A + + +
Sbjct: 378 FVADGKVRSACNLWEDLVDSGYIAD-----IGIYNAVIKGLCSVNQVDKAYKLFQVAIEE 432
Query: 229 GLSPD----------------VVSYTNVIKGFCKIGEPVKAFELK----LEMDEKGIPLY 268
L PD + ++NV++ ++G PV + + L DE+ +
Sbjct: 433 ELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMA 492
Query: 269 EDIYQSLLDDLSDEVT-YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGL 327
D++ L V+ Y+ L+ + G++ + L EM + + D S+ I
Sbjct: 493 LDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCF 552
Query: 328 NKKATTIEAKRSLVRWFYQDCL-SIPAYRTYDT-------------LIENCSNN------ 367
+K A + C+ SI AY + L+ C N
Sbjct: 553 VEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPM 612
Query: 368 EFK---TVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAY 424
EFK TV + K + A K K D+M IY +I +HG + A
Sbjct: 613 EFKYALTVCHVCKGSN----AEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAR 668
Query: 425 DMYKE 429
+++ E
Sbjct: 669 EVFTE 673
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 116/293 (39%), Gaps = 17/293 (5%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A + + M +G PS + LI + R + M K G P V Y ++
Sbjct: 177 ADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMD 236
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
+ G A + G++ ++ T+ IL+ LC+ GR+ + ++ M P
Sbjct: 237 ALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKP 296
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+ YT ++ +G +L + DEM D I P ++ Y + G C GRVE
Sbjct: 297 DVFAYTAMIKTLVSEGNLDASLRVWDEMRR-----DEIKPDVMAYGTLVVGLCKDGRVER 351
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG----IPLYEDIYQ 273
+ M + D Y +I+GF G+ A L ++ + G I +Y + +
Sbjct: 352 GYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIK 411
Query: 274 SLLDDLSDEVTY--------STLINDFHAQGNLMDAYCLESEMSEYSYLTDDV 318
L + Y L DF +M AY + + +S++S + + +
Sbjct: 412 GLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERI 464
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 12/219 (5%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+V A N+ + ++ G+ + YN +I G C ++ +A + + + L PD +T
Sbjct: 383 KVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLS 442
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR-KGRLSKAFDLFLEMLR 152
P++ + +L + ++ G P +D LC + + + A D+F +L+
Sbjct: 443 PIMVAYVVMNRLSDFSNVLERIGELG-YPVSDYLTQFFKLLCADEEKNAMALDVFY-ILK 500
Query: 153 EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVL 212
+Y LM G+ K+L L EM GF PD S S+ I CC +
Sbjct: 501 TKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAI-------CCFV 553
Query: 213 --GRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
G V+ A + +M P + +Y ++ KG C+IGE
Sbjct: 554 EKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGE 592
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 18/280 (6%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK 107
+G+ A YN + R F+ A + M +G P + LI + +
Sbjct: 152 KGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLR 211
Query: 108 AFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
+ + KM G P Y ++ L + G A ++ + +G+ + L+
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 168 YYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMAD 227
C G + L++ M PD + Y A I G ++ +L + M
Sbjct: 272 GLCKAGRIEEMLEILQRMRENLCKPD-----VFAYTAMIKTLVSEGNLDASLRVWDEMRR 326
Query: 228 MGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYST 287
+ PDV++Y ++ G CK G + +EL +EM K I L D Y
Sbjct: 327 DEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQI-------------LIDREIYRV 373
Query: 288 LINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGL 327
LI F A G + A L ++ + Y+ D I + I GL
Sbjct: 374 LIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGL 413
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 115/262 (43%), Gaps = 11/262 (4%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG- 84
+ L +V QVDKA+ + + I P T + ++ Y +R + +L + + G
Sbjct: 410 IKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGY 469
Query: 85 -LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
+S + ++ L+C K A ++ + KG Y IL+ L + G + K+
Sbjct: 470 PVSDYLTQFFKLLCA--DEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKS 526
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
LF EM + G P Y+ + + KG+ A +++I + PS+ Y
Sbjct: 527 LSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCV-----PSIAAYL 581
Query: 204 ARIHGCCVLGRVEEALGILRG-MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
+ G C +G ++ + ++R + ++ P Y + CK K ++ EM++
Sbjct: 582 SLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQ 641
Query: 263 KGIPLYEDIYQSLLDDLSDEVT 284
+G+ + E IY +++ +S T
Sbjct: 642 EGVFINEVIYCAIISGMSKHGT 663
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 110/239 (46%), Gaps = 5/239 (2%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
++SLL V Q + K M+ GFSP V TYN L+ R + + +MA+ G
Sbjct: 226 LNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGF 285
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
SPD TY L+ + K A M GI P Y LI L R G L
Sbjct: 286 SPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKY 345
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
EM++ G P YT ++ Y GE KA ++ EM KG LP+ + YN+
Sbjct: 346 FLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPN-----VFTYNSM 400
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
I G C+ G EA +L+ M G +P+ V Y+ ++ K G+ +A ++ EM +KG
Sbjct: 401 IRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 18/259 (6%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
+ P +YN +++ ++K + + M + G SPDV TY L+ + GK+ +
Sbjct: 215 YRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFD 274
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
+ +M G PD+ TY IL+ L + + A M G+ P YT L++
Sbjct: 275 RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL 334
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
G DEM+ G PD +V Y I G V G +++A + R M G
Sbjct: 335 SRAGNLEACKYFLDEMVKAGCRPD-----VVCYTVMITGYVVSGELDKAKEMFREMTVKG 389
Query: 230 LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLI 289
P+V +Y ++I+G C GE +A L EM+ +G + V YSTL+
Sbjct: 390 QLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCN-------------PNFVVYSTLV 436
Query: 290 NDFHAQGNLMDAYCLESEM 308
+ G L +A + EM
Sbjct: 437 SYLRKAGKLSEARKVIREM 455
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++D+ + M GFSP TYN L+H + ++ A+ L M + G+ P V Y
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G + G L +MV G PD Y ++I G L KA ++F EM +
Sbjct: 329 TLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK 388
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G P+ + Y ++ C GEF +A L EM ++ G +P+ V+Y+ + G
Sbjct: 389 GQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESR-----GCNPNFVVYSTLVSYLRKAG 443
Query: 214 RVEEALGILRGMADMG----LSPDVVSY 237
++ EA ++R M G L P ++ Y
Sbjct: 444 KLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 134/347 (38%), Gaps = 37/347 (10%)
Query: 89 VDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFL 148
V++Y+ L+ F + G+ + + +MV G A T+ +LI + G +A F+
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFM 208
Query: 149 EMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHG 208
+ P K+ Y ++N ++ E + K L DG SP ++ YN +
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYKLI-----EWVYKQMLEDGFSPDVLTYNILLWT 263
Query: 209 CCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLY 268
LG+++ + MA G SPD +Y ++ K +P+ A M E GI
Sbjct: 264 NYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGID-- 321
Query: 269 EDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLN 328
+ Y+TLI+ GNL EM + D V +V I G
Sbjct: 322 -----------PSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYV 370
Query: 329 KKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHK 387
+AK + +P TY+++I C EF+ L+K+ RG
Sbjct: 371 VSGELDKAKEMFREMTVKG--QLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGC--- 425
Query: 388 AAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
P +Y+ L+ + G + +A + +E V G
Sbjct: 426 -------------NPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
K V +DP + + + L ++ L M+ G P V Y +I GY +
Sbjct: 316 KEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGEL 375
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
+A + R+M +G P+V TY +I G C G+ +A + +M +G P+ Y L
Sbjct: 376 DKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTL 435
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ L + G+LS+A + EM+++G H + ++M Y
Sbjct: 436 VSYLRKAGKLSEARKVIREMVKKGHYVH--LVPKMMKY 471
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 182/442 (41%), Gaps = 48/442 (10%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD+ ++ + + + +++ + G PS+ +N ++ + D
Sbjct: 108 LPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIARE 167
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
R M G+ DV TY L+ G T ++G F++ M G+ P+A Y L+ L
Sbjct: 168 FFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHAL 227
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C+ G++ +A L EM P+ + L++ YC + + +++ L ++ + GF+PD
Sbjct: 228 CKNGKVGRARSLMSEM----KEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDV 283
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
++ + V + C GRV EAL +L + G DVV+ ++KG+C +G+ A
Sbjct: 284 VTVTKV-----MEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQ 338
Query: 255 ELKLEMDEKG-----------IPLYEDI--YQSLLDDLSDE---------VTYSTLINDF 292
+EM+ KG I Y D+ S LD +D T++TLI
Sbjct: 339 RFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGL 398
Query: 293 HAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIP 352
G D + M + D + RI+ N I RW +D L
Sbjct: 399 SIGGRTDDGLKILEMMQD-----SDTVHGARIDPYN---CVIYGFYKENRW--EDALEF- 447
Query: 353 AYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIF 412
+ L + FK + +G A+D+M+ P + + LI
Sbjct: 448 -LLKMEKLFPRAVDRSFKLI-----SLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIH 501
Query: 413 DHCRHGNVHKAYDMYKETVHSG 434
+ +HG + ++ ++ + V G
Sbjct: 502 RYSQHGKIEESLELINDMVTRG 523
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 171/421 (40%), Gaps = 61/421 (14%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H+L +V +A +++ M P+ T+N LI YC + +++ +L G
Sbjct: 224 LHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGF 279
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PDV T ++ C G++ +A E+ ++ KG D L+ C G++ A
Sbjct: 280 VPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQR 339
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
F+EM R+G P+ Y L+ YC G ALD ++M D I + +N
Sbjct: 340 FFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT-----DAIRWNFATFNTL 394
Query: 206 IHGCCVLGRVEEALGILRGMADMGL--SPDVVSYTNVIKGFCKIGEPVKAFELKLEMD-- 261
I G + GR ++ L IL M D + Y VI GF K A E L+M+
Sbjct: 395 IRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKL 454
Query: 262 -----EKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD 316
++ L + +DDL + Y +I + +++ ++CL S++ + +
Sbjct: 455 FPRAVDRSFKLISLCEKGGMDDL--KTAYDQMIGE-GGVPSIIVSHCLIHRYSQHGKIEE 511
Query: 317 --DVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVG 374
++I+ + G +++T A +I C ++ +
Sbjct: 512 SLELINDMVTRGYLPRSSTFNA----------------------VIIGFCKQDKVMNGIK 549
Query: 375 LVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
V+D + RG P+ YN L+ + C G++ KA+ ++ V
Sbjct: 550 FVEDMAERGCV----------------PDTESYNPLLEELCVKGDIQKAWLLFSRMVEKS 593
Query: 435 V 435
+
Sbjct: 594 I 594
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 51/290 (17%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK--------------RGLS------- 86
+G+ P+V TYN LI GYC A+ DM RGLS
Sbjct: 347 KGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDD 406
Query: 87 ----------------PDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
+D Y +I GF + + A E KM + + P A
Sbjct: 407 GLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFK 464
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
+++LC KG + + +M+ EG P + L++ Y G+ ++L+L ++M+ +G+
Sbjct: 465 LISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGY 524
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEP 250
LP + +NA I G C +V + + MA+ G PD SY +++ C G+
Sbjct: 525 LPRSST-----FNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDI 579
Query: 251 VKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMD 300
KA+ L M EK I ++ SL+ LS + H +L D
Sbjct: 580 QKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTA-------IHVNSSLQD 622
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query: 27 HSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
H L++ Y +++++ ++ M+ RG+ P +T+N +I G+C+ D+ + + DMA+
Sbjct: 497 HCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAE 556
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
RG PD ++Y PL+ C G + KA+ + ++MV K I+PD + L+ L +K
Sbjct: 557 RGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQK 611
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
MI G PS+ + LIH Y + + +E++ ++ DM RG P T+ +I GFC+ K
Sbjct: 484 MIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDK 543
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
+ + M +G +PD ++Y L+ LC KG + KA+ LF M+ + + P +++
Sbjct: 544 VMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSS 603
Query: 165 LM 166
LM
Sbjct: 604 LM 605
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 115/246 (46%), Gaps = 12/246 (4%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A + M+ R + YN L+ C++ + ++M GL PD ++ I
Sbjct: 227 ARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIH 286
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
+C G + A+++ +M ++P+ T+ +I TLC+ ++ A+ L EM+++G +P
Sbjct: 287 AYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP 346
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+ Y +M Y+C E ++A L M LPD + YN + +GR +
Sbjct: 347 DTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHT-----YNMVLKLLIRIGRFDR 401
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFC----KIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
A I GM++ P V +YT +I G K+ E + FE+ M ++GIP Y +
Sbjct: 402 ATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEM---MIDEGIPPYSTTVE 458
Query: 274 SLLDDL 279
L + L
Sbjct: 459 MLRNRL 464
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 138/374 (36%), Gaps = 34/374 (9%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRG-----FSPSVATYNELIHGYCRADRFK 71
PD + L H L+ + K +L ++ F S + + Y RA+
Sbjct: 96 PDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPS 155
Query: 72 EAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILI 131
EA M + G+ P VD L+ C + A E K GI+P A TY IL+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 132 LTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL 191
R S A +F EML Y L++ C G+ + EM N G
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 192 PDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPV 251
PD S ++ IH C G V A +L M L P+V ++ ++IK CK +
Sbjct: 276 PDAYSFAIF-----IHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVD 330
Query: 252 KAFELKLEMDEKGIPLYEDIYQSLL----------------------DDLSDEVTYSTLI 289
A+ L EM +KG Y S++ L D TY+ ++
Sbjct: 331 DAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVL 390
Query: 290 NDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCL 349
G A + MSE + +V I+GL +K +E +
Sbjct: 391 KLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDE-- 448
Query: 350 SIPAYRTYDTLIEN 363
IP Y T ++ N
Sbjct: 449 GIPPYSTTVEMLRN 462
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD + +H+ + V A+ +L M P+V T+N +I C+ ++ +A
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L +M ++G +PD TY ++ C ++ +A ++ ++M LPD TY +++ L
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF-KGEFSKALDLPDEMINKGFLP 192
R GR +A +++ M P YT +++ KG+ +A + MI++G P
Sbjct: 394 IRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 134/315 (42%), Gaps = 28/315 (8%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G P+ T+N L + +C F+E L M + G PD+ TY L+ +C+ G+L +A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
F + M + ++PD TY LI LC+ GR+ +A F M+ G+ P Y L+
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
YC +G ++ L EM+ +PD + ++ + G GR+ A+ + + +
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVI-----VEGFVREGRLLSAVNFVVELRRL 405
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFE-LKLEMDEKGIPLYEDIYQSLLDDLS------- 280
+ +I C+ G+P A L ++E+G + Y +L++ LS
Sbjct: 406 KVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEE 465
Query: 281 ---------------DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRIN 325
D TY LI G +A L +EM + D I +
Sbjct: 466 ALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVY 525
Query: 326 GLNKKATTIEAKRSL 340
G K+ +A+R L
Sbjct: 526 GYCKELDFDKAERLL 540
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 149/389 (38%), Gaps = 39/389 (10%)
Query: 55 ATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAK 114
++ L+ GY + +E + R++ G S V T L+ G + + +++ +
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 115 MVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
M GI P+ T+ IL C + D +M EG P Y L++ YC +G
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 175 FSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
+A L M + +PD LV Y + I G C GRV EA M D G+ PD
Sbjct: 287 LKEAFYLYKIMYRRRVVPD-----LVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHA 294
+SY +I +CK G ++ +L EM + + D T ++ F
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV-------------VPDRFTCKVIVEGFVR 388
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
+G L+ A E+ + I L ++ AK L R ++
Sbjct: 389 EGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKP- 447
Query: 355 RTYDTLIENCS-----------------NNEF---KTVVGLVKDFSMRGLAHKAAKAHDK 394
TY+ LIE+ S N+ KT L+ G +A +
Sbjct: 448 ETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAE 507
Query: 395 MLHGNYKPEGAIYNLLIFDHCRHGNVHKA 423
M KP+ I L++ +C+ + KA
Sbjct: 508 MFDSEVKPDSFICGALVYGYCKELDFDKA 536
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 5/257 (1%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
V L + V++ + + ++ GFS SV T N L++G + D ++ + M + G+
Sbjct: 173 VKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGI 232
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P+ T+ L FC + + KM +G PD TY L+ + CR+GRL +AF
Sbjct: 233 HPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFY 292
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
L+ M R V P YT L+ C G +A M+++G PD +S YN
Sbjct: 293 LYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMS-----YNTL 347
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
I+ C G ++++ +L M + PD + +++GF + G + A +E+ +
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKV 407
Query: 266 PLYEDIYQSLLDDLSDE 282
+ ++ L+ L E
Sbjct: 408 DIPFEVCDFLIVSLCQE 424
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 4/246 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+PD + V S ++ +A + K M R P + TY LI G C+ R +EA
Sbjct: 267 FEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAH 326
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
M RG+ PD +Y LI +C+ G + ++ ++ +M+ ++PD T +++
Sbjct: 327 QTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
R+GRL A + +E+ R V + L+ C +G+ A L D +I + +G
Sbjct: 387 VREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEE----EG 442
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
YN I +EEAL + + + D +Y +I C+IG +A
Sbjct: 443 HEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAE 502
Query: 255 ELKLEM 260
L EM
Sbjct: 503 SLMAEM 508
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 1/154 (0%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G TYN LI R D +EA+ + + + D TY LI C+ G+ +A
Sbjct: 442 GHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREA 501
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ A+M + PD+ G L+ C++ KA L E Y L+
Sbjct: 502 ESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKA 561
Query: 169 YCFKG-EFSKALDLPDEMINKGFLPDGISPSLVI 201
C G + KAL+L + M GF+P+ ++ +I
Sbjct: 562 VCETGCGYKKALELQERMQRLGFVPNRLTCKYLI 595
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 177/427 (41%), Gaps = 45/427 (10%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G+ P TYN L+ + +A + EA+ +L++M + D TY L+ + + G +A
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ M KG++P+A TY +I + G+ +A LF M G P+ Y +++
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
K ++ + + +M + +G SP+ +N + C G + + R M
Sbjct: 431 LGKKSRSNEMIKMLCDMKS-----NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC 485
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS-------- 280
G PD ++ +I + + G V A ++ EM G Y +LL+ L+
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 281 --------------DEVTYSTLINDFHAQGNLMDAYCLESEMSE------YSYLTDDVIS 320
E +YS ++ + GN + +E+ + E + L +++
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLA 605
Query: 321 SVRINGL--NKKATTIEAK----------RSLVRWFYQDCLSIPAYRTYDTLIENCSNNE 368
+ + L +++A T+ K S++ F ++ + A +++ E+ + +
Sbjct: 606 NFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Query: 369 FKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYK 428
T L+ + RG KA + + KP+ YN +I CR G + +A M
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 429 ETVHSGV 435
E G+
Sbjct: 726 EMTERGI 732
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 192/466 (41%), Gaps = 36/466 (7%)
Query: 9 NNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRAD 68
N+ A+ LD + ++ + Y V A +L + ++ + V Y ++H Y R
Sbjct: 167 NSGALKLDHQVIEIFVRILGRESQYSV--AAKLLDKIPLQEYLLDVRAYTTILHAYSRTG 224
Query: 69 RFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE----MKAKMVHKGILPDA 124
++++A+ + M + G SP + TY ++ F GK+G+++ + +M KG+ D
Sbjct: 225 KYEKAIDLFERMKEMGPSPTLVTYNVILDVF---GKMGRSWRKILGVLDEMRSKGLKFDE 281
Query: 125 DTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDE 184
T ++ R+G L +A + F E+ G P Y L+ + G +++AL + E
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 185 MINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGF 244
M D ++ YN + G +EA G++ M G+ P+ ++YT VI +
Sbjct: 342 MEENSCPADSVT-----YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAY 396
Query: 245 CKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIN---DFHAQG----- 296
K G+ +A +L M E G Y ++L L + + +I D + G
Sbjct: 397 GKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNR 456
Query: 297 ---NLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPA 353
N M A C M ++ + V ++ G T +L+ + + + A
Sbjct: 457 ATWNTMLALCGNKGMDKF---VNRVFREMKSCGFEPDRDTFN---TLISAYGRCGSEVDA 510
Query: 354 YRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFD 413
+ Y + N T L+ + +G M +KP Y+L++
Sbjct: 511 SKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 570
Query: 414 HCRHGNVHKAYDMYKETVHSGVEIGRAEPSFTWPRPGLHFFFVAQA 459
+ + GN + E + + ++ G+ PS+ R L F +A
Sbjct: 571 YAKGGNY-----LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 21/263 (7%)
Query: 11 KAVILDPDERNLLSQVHSLLNVY-----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYC 65
K+ +PD ++L++ Y +VD A M M GF+ V TYN L++
Sbjct: 483 KSCGFEPDRDTF----NTLISAYGRCGSEVD-ASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 66 RADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDAD 125
R ++ ++ DM +G P +Y ++ + + G ++ ++ I P
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWM 597
Query: 126 TYGILILT--LCRK-GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLP 182
L+L CR +AF LF + G P I+ +++ + + +A
Sbjct: 598 LLRTLLLANFKCRALAGSERAFTLF---KKHGYKPDMVIFNSMLSIFTRNNMYDQA---- 650
Query: 183 DEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIK 242
E I + DG+SP LV YN+ + G +A IL+ + L PD+VSY VIK
Sbjct: 651 -EGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIK 709
Query: 243 GFCKIGEPVKAFELKLEMDEKGI 265
GFC+ G +A + EM E+GI
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGI 732
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 169/436 (38%), Gaps = 43/436 (9%)
Query: 21 NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM 80
N L QV VY +A ++LK M TYNEL+ Y RA KEA G++ M
Sbjct: 320 NALLQVFGKAGVYT--EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377
Query: 81 AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRL 140
K+G+ P+ TY +I + + GK +A ++ M G +P+ TY ++ L +K R
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 141 SKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD------- 193
++ + +M G SP++ + ++ KG + EM + GF PD
Sbjct: 438 NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 194 -----------------------GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
G + + YNA ++ G ++ M G
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI-PLYEDIYQSLLDDLSDEVTYST-- 287
P SY+ +++ + K G + ++ + E I P + + LL + +
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617
Query: 288 LINDFHAQGNLMDAYCLESEMSEYSY-----LTDDVISSVRINGLNKKATTIEAKRSLVR 342
F G D S +S ++ + ++ S+R +GL+ T SL+
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN---SLMD 674
Query: 343 WFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKP 402
+ + A TL ++ + + ++K F RGL +A + +M +P
Sbjct: 675 MYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Query: 403 EGAIYNLLIFDHCRHG 418
YN + + G
Sbjct: 735 CIFTYNTFVSGYTAMG 750
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 21 NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM 80
N + + + N+Y D+A +L+ + G SP + TYN L+ Y R +A IL+ +
Sbjct: 635 NSMLSIFTRNNMY--DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Query: 81 AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRL 140
K L PD+ +Y +I GFC+ G + +A M ++M +GI P TY + G
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 752
Query: 141 SKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDL 181
++ D+ M + P++ + +++ YC G++S+A+D
Sbjct: 753 AEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDF 793
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G+ P + +N ++ + R + + +A GIL + + GLSPD+ TY L+ + + G+ KA
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
E+ + + PD +Y +I CR+G + +A + EM G+ P + Y ++
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEAL 219
Y G F++ D+ + M P+ ++ +V + G C G+ EA+
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMV-----VDGYCRAGKYSEAM 791
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 103/254 (40%), Gaps = 40/254 (15%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRA----------DRFKE-----AVGILRDM-- 80
N++ M +GF P+ +Y+ ++ Y + +R KE + +LR +
Sbjct: 545 GENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLL 604
Query: 81 ------------------AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILP 122
K G PD+ + ++ F + +A + + G+ P
Sbjct: 605 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 123 DADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLP 182
D TY L+ R+G KA ++ + + + P Y ++ +C +G +A+ +
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRML 724
Query: 183 DEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIK 242
EM + GI P + YN + G +G E ++ MA P+ +++ V+
Sbjct: 725 SEMTER-----GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVD 779
Query: 243 GFCKIGEPVKAFEL 256
G+C+ G+ +A +
Sbjct: 780 GYCRAGKYSEAMDF 793
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+ +A ML M RG P + TYN + GY F E ++ MAK P+ T+
Sbjct: 717 MQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKM 776
Query: 95 LICGFCQTGKLGKAFEMKAKM 115
++ G+C+ GK +A + +K+
Sbjct: 777 VVDGYCRAGKYSEAMDFVSKI 797
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V++A + MI GF P + + C K+A L + K G P Y
Sbjct: 766 VEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSI 824
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
I C+ GKL +A A + L D TYG ++ L ++G L KA D M G
Sbjct: 825 YIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIG 884
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
P ++YT L+ Y+ + + K L+ +M + PS+V Y A I G LG+
Sbjct: 885 TKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEG-----ESCEPSVVTYTAMICGYMSLGK 939
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIP 266
VEEA R M + G SPD +Y+ I C+ + A +L EM +KGI
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIA 991
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 141/345 (40%), Gaps = 52/345 (15%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
LD N++ + SL + D A K M+ +G + + TY L+ ++++
Sbjct: 257 LDATAYNIM--IRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQ 314
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
I DM + + D + L+ FC +GK+ +A E+ ++ +K + DA + IL+ L
Sbjct: 315 SIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGL 374
Query: 135 CRKGRL----------------------------------SKAFDLFLEMLREGVSPHKY 160
CR R+ SKA + F + + G P
Sbjct: 375 CRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVS 434
Query: 161 IYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALG 220
YT +M + +F K +L +EMI G PD ++ + V + G RV EA
Sbjct: 435 TYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAV-----VAGHLGQNRVAEAWK 489
Query: 221 ILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS 280
+ M + G+ P SY+ +K C+ + ++ +M I + +DI+ ++ +
Sbjct: 490 VFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSME 549
Query: 281 D--EVTYSTLINDFHAQGNLMDAYCLE------SEMSEYSYLTDD 317
E LI + + N +YC E +E S+ L DD
Sbjct: 550 KNGEKEKIHLIKEIQKRSN---SYCDELNGSGKAEFSQEEELVDD 591
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 158/401 (39%), Gaps = 44/401 (10%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GFS V YN ++ A ++ +M K G D+ T+ LI + + K+GK
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ KM G DA Y I+I +LC GR A + + EM+ +G++ Y L++
Sbjct: 244 LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDC 303
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+ + D+M+ + + + + + CV G+++EAL ++R + +
Sbjct: 304 IAKSEKVDVVQSIADDMVRICEISEHDA-----FGYLLKSFCVSGKIKEALELIRELKNK 358
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
+ D + ++KG C+ V A E+ M + L D Y +
Sbjct: 359 EMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRR--------------KLDDSNVYGII 404
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT-IEAKRSL--VRWFY 345
I+ + Q ++ A + ++ +G + +T E + L ++ F
Sbjct: 405 ISGYLRQNDVSKAL--------------EQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFE 450
Query: 346 QDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGA 405
+ C ++ +IEN + + +V + +A K M KP
Sbjct: 451 KGC------NLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWK 504
Query: 406 IYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPSFTW 446
Y++ + + CR + ++ + S + I + F+W
Sbjct: 505 SYSIFVKELCRSSRYDEIIKIFNQMHASKIVI--RDDIFSW 543
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 8/230 (3%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G+ + YN I FK+ + +M ++G DT+ +I + +TG A
Sbjct: 673 GYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIA 732
Query: 109 FEMKAKMVHKGILPDADTYGILILTLC-RKGR-LSKAFDLFLEMLREGVSPHKYIYTRLM 166
+M G++P + T+ LI LC +KGR + +A F EM+R G P + + +
Sbjct: 733 IRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYL 792
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA 226
C G A D + GF P V Y+ I C +G++EEAL L
Sbjct: 793 GCLCEVGNTKDAKSCLDSLGKIGF------PVTVAYSIYIRALCRIGKLEEALSELASFE 846
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
D +Y +++ G + G+ KA + M E G +Y SL+
Sbjct: 847 GERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLI 896
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%)
Query: 56 TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM 115
TY ++HG + ++A+ + M + G P V Y LI F + +L K E KM
Sbjct: 856 TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM 915
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
+ P TY +I G++ +A++ F M G SP Y++ +N C +
Sbjct: 916 EGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKS 975
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRV 215
AL L EM++KG P I+ V Y G L R+
Sbjct: 976 EDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARI 1015
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 19 ERNLLSQ------VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKE 72
ER+LL Q VH LL + KA + + M G P V Y LI + + + ++
Sbjct: 848 ERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEK 907
Query: 73 AVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILIL 132
+ + M P V TY +ICG+ GK+ +A+ M +G PD TY I
Sbjct: 908 VLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFIN 967
Query: 133 TLCRKGRLSKAFDLFLEMLREGVSP 157
LC+ + A L EML +G++P
Sbjct: 968 CLCQACKSEDALKLLSEMLDKGIAP 992
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 134/341 (39%), Gaps = 41/341 (12%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+D ++ M G + T+ LI Y +A + + + + M K G D Y
Sbjct: 205 LDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNI 264
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
+I C G+ A E +M+ KGI TY +L+ + + ++ + +M+R
Sbjct: 265 MIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRIC 324
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+ L+ +C G+ +AL+L E+ NK D + + G C R
Sbjct: 325 EISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDA-----KYFEILVKGLCRANR 379
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE------------------- 255
+ +AL I+ M L V Y +I G+ + + KA E
Sbjct: 380 MVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTE 438
Query: 256 -----LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSE 310
KL+ EKG L+ ++ ++ ++ D V + ++ Q + +A+ + S M E
Sbjct: 439 IMQHLFKLKQFEKGCNLFNEMIENGIE--PDSVAITAVVAGHLGQNRVAEAWKVFSSMEE 496
Query: 311 ---------YSYLTDDVISSVRINGLNKKATTIEAKRSLVR 342
YS ++ S R + + K + A + ++R
Sbjct: 497 KGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIR 537
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 26 VHSLLNVY-----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM 80
V++ L VY Q++K + M PSV TY +I GY + +EA R+M
Sbjct: 891 VYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNM 950
Query: 81 AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
+RG SPD TY I CQ K A ++ ++M+ KGI P + + L R+G+
Sbjct: 951 EERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 11/188 (5%)
Query: 1 MMITASCKNNKAV----ILDPDERNLL--SQVHSL-----LNVYQVDKAHNMLKYMIVRG 49
+++ C+ N+ V I+D +R L S V+ + L V KA + + G
Sbjct: 369 ILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSG 428
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
P V+TY E++ + +F++ + +M + G+ PD ++ G ++ +A+
Sbjct: 429 RPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAW 488
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
++ + M KGI P +Y I + LCR R + +F +M + I++ +++
Sbjct: 489 KVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSM 548
Query: 170 CFKGEFSK 177
GE K
Sbjct: 549 EKNGEKEK 556
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 58/344 (16%)
Query: 106 GKAF-EMKA---KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYI 161
GK F +M++ +M +G L DT+ I+I+ R G + A F EM G+ P
Sbjct: 691 GKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSST 750
Query: 162 YTRLMNYYCFKG--EFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGC-CVLGRVEEA 218
+ L+ C K +A EMI GF+PD LV GC C +G ++A
Sbjct: 751 FKCLITVLCEKKGRNVEEATRTFREMIRSGFVPD---RELV---QDYLGCLCEVGNTKDA 804
Query: 219 LGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDD 278
L + +G P V+Y+ I+ C+IG KLE + +E +SLL
Sbjct: 805 KSCLDSLGKIGF-PVTVAYSIYIRALCRIG--------KLEEALSELASFEG-ERSLL-- 852
Query: 279 LSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKR 338
D+ TY ++++ +G+L A D ++S++ G +
Sbjct: 853 --DQYTYGSIVHGLLQRGDLQKAL--------------DKVNSMKEIGTK---PGVHVYT 893
Query: 339 SLVRWFYQDCLSIPAYRTYDTLIENCSNNEFK-------TVVGLVKDFSMRGLAHKAAKA 391
SL+ +F+++ + + ++E C E + T ++ + G +A A
Sbjct: 894 SLIVYFFKE-------KQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNA 946
Query: 392 HDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
M P+ Y+ I C+ A + E + G+
Sbjct: 947 FRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGI 990
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 6/216 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+ H +L M+ G P T + + C R EA +++++ ++ PD TY
Sbjct: 139 SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYN 198
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHK-GILPDADTYGILILTLCRKGRLSKAFDLFLEMLR 152
L+ C+ L +E +M + PD ++ ILI +C L +A L ++
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 153 EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVL 212
G P ++Y +M +C + S+A+ + +M +G PD I+ YN I G
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT-----YNTLIFGLSKA 313
Query: 213 GRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
GRVEEA L+ M D G PD +YT+++ G C+ G
Sbjct: 314 GRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 21/251 (8%)
Query: 49 GFSPSVATYNELIHGYCRA--DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLG 106
F P +T+ L+ CRA +L M GL PD T + C+TG++
Sbjct: 117 NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVD 176
Query: 107 KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE-GVSPHKYIYTRL 165
+A ++ ++ K PD TY L+ LC+ L ++ EM + V P +T L
Sbjct: 177 EAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTIL 236
Query: 166 MNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM 225
++ C +A+ L ++ N GF PD +YN + G C L + EA+G+ + M
Sbjct: 237 IDNVCNSKNLREAMYLVSKLGNAGFKPD-----CFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 226 ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTY 285
+ G+ PD ++Y +I G K G +A M + G YE D TY
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG---YE----------PDTATY 338
Query: 286 STLINDFHAQG 296
++L+N +G
Sbjct: 339 TSLMNGMCRKG 349
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 21/279 (7%)
Query: 57 YNELIHGYCRADRFKEAVGILRDMAKR--GLSPDVDTYYPLICGFCQT--GKLGKAFEMK 112
+N ++ Y + V + + + K P T+ L+ C+ + +
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
MV+ G+ PD T I + +LC GR+ +A DL E+ + P Y Y L+ + C
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
+ + DEM + + P LV + I C + EA+ ++ + + G P
Sbjct: 208 KDLHVVYEFVDEMRDDF----DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 233 DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDF 292
D Y ++KGFC + + +A + +M E+G+ D++TY+TLI
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE-------------PDQITYNTLIFGL 310
Query: 293 HAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKA 331
G + +A M + Y D + +NG+ +K
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 78/195 (40%), Gaps = 36/195 (18%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCR-------- 66
L+PD+ V SL +VD+A +++K + + P TYN L+ C+
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVY 214
Query: 67 ----------------------------ADRFKEAVGILRDMAKRGLSPDVDTYYPLICG 98
+ +EA+ ++ + G PD Y ++ G
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 99 FCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPH 158
FC K +A + KM +G+ PD TY LI L + GR+ +A M+ G P
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 159 KYIYTRLMNYYCFKG 173
YT LMN C KG
Sbjct: 335 TATYTSLMNGMCRKG 349
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 114/283 (40%), Gaps = 50/283 (17%)
Query: 146 LFLEMLRE--GVSPHKYIYTRLMNYYCFKGEFS-----KALDLPDEMINKGFLPDGISPS 198
LF +L+ P + + L+++ C + S + L+L M+N G PD ++
Sbjct: 107 LFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNL---MVNNGLEPDQVTTD 163
Query: 199 LVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKL 258
+ + C GRV+EA +++ + + PD +Y ++K CK + +E
Sbjct: 164 IAV-----RSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVD 218
Query: 259 EMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDV 318
EM + D D V+++ LI++ NL +A L S++ + D
Sbjct: 219 EMRDD------------FDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 319 ISSVRING---LNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGL 375
+ + + G L+K + + + + + P TY+TLI GL
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE-----PDQITYNTLI-----------FGL 310
Query: 376 VKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHG 418
K G +A M+ Y+P+ A Y L+ CR G
Sbjct: 311 SK----AGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 5/269 (1%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
K + L P+ + + L+ + A + M+ PSV TYN LI CR D
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
+A +L DM K+ + P+ T+ L+ G C G+ +A ++ M ++G P YGIL
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
+ L ++GR+ +A L EM + + P IY L+N+ C + +A + EM K
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK-- 355
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEP 250
G P+ Y I G C + + L +L M P ++ ++ G K G
Sbjct: 356 ---GCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNL 412
Query: 251 VKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
A + M +K + +Q+LL DL
Sbjct: 413 DHACFVLEVMGKKNLSFGSGAWQNLLSDL 441
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 9/229 (3%)
Query: 23 LSQVHSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILR 78
+ +++L+NV +++KA + P+ ++N LI G+ ++ A +
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFD 210
Query: 79 DMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKG 138
+M + + P V TY LI C+ +GKA + M+ K I P+A T+G+L+ LC KG
Sbjct: 211 EMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKG 270
Query: 139 RLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPS 198
++A L +M G P Y LM+ +G +A L EM + I P
Sbjct: 271 EYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKR-----RIKPD 325
Query: 199 LVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKI 247
+VIYN ++ C RV EA +L M G P+ +Y +I GFC+I
Sbjct: 326 VVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRI 374
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+D H + + VR ++ + N LI+ ++A L P+ ++
Sbjct: 136 IDVFHKITSFDCVR----TIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNI 191
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI GF A ++ +M+ + P TY LI LCR + KA L +M+++
Sbjct: 192 LIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKR 251
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+ P+ + LM C KGE+++A L +M + G P LV Y + GR
Sbjct: 252 IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYR-----GCKPGLVNYGILMSDLGKRGR 306
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
++EA +L M + PDVV Y ++ C +A+ + EM KG Y+
Sbjct: 307 IDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRM 366
Query: 275 LLDDLSDEVTYSTLINDFHAQGNLMDA 301
++D I DF + N+++A
Sbjct: 367 MIDGFCR-------IEDFDSGLNVLNA 386
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 134/324 (41%), Gaps = 21/324 (6%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GF +Y+ LI+ ++ F ILR + R + + LI + + G + KA
Sbjct: 76 GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKA 135
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
++ K+ + + LI L G L KA F + P+ + L+
Sbjct: 136 IDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKG 195
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+ K ++ A + DEM L + PS+V YN+ I C + +A +L M
Sbjct: 196 FLDKCDWEAACKVFDEM-----LEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK 250
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
+ P+ V++ ++KG C GE +A +L +M+ +G V Y L
Sbjct: 251 RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCK-------------PGLVNYGIL 297
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDC 348
++D +G + +A L EM + D VI ++ +N L + EA R L + C
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 349 LSIPAYRTYDTLIEN-CSNNEFKT 371
P TY +I+ C +F +
Sbjct: 358 K--PNAATYRMMIDGFCRIEDFDS 379
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 124/322 (38%), Gaps = 43/322 (13%)
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLR-EGVSPHKYIYTRLMNYYCFKGEFSK 177
G D +Y LI L K R A D L ++R V + ++ L+ +Y G K
Sbjct: 76 GFRHDYPSYSSLIYKLA-KSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDK 134
Query: 178 ALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSY 237
A+D+ ++ + + ++ N I+ G +E+A G DM L P+ VS+
Sbjct: 135 AIDVFHKITSFDCVR-----TIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSF 189
Query: 238 TNVIKGF---CKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHA 294
+IKGF C K F+ LEM+ + VTY++LI
Sbjct: 190 NILIKGFLDKCDWEAACKVFDEMLEMEVQ----------------PSVVTYNSLIGFLCR 233
Query: 295 QGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
++ A L +M + + V + + GL K EAK+ + Y+ C P
Sbjct: 234 NDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCK--PGL 291
Query: 355 RTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDH 414
Y L+ D RG +A +M KP+ IYN+L+
Sbjct: 292 VNYGILMS---------------DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 415 CRHGNVHKAYDMYKETVHSGVE 436
C V +AY + E G +
Sbjct: 337 CTECRVPEAYRVLTEMQMKGCK 358
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++D+A +L M R P V YN L++ C R EA +L +M +G P+ TY
Sbjct: 306 RIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYR 365
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
+I GFC+ + M+ P T+ ++ L + G L A + M ++
Sbjct: 366 MMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKK 425
Query: 154 GVSPHKYIYTRLMNYYCFK--GEFSKAL 179
+S + L++ C K G + +AL
Sbjct: 426 NLSFGSGAWQNLLSDLCIKDGGVYCEAL 453
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 126/271 (46%), Gaps = 23/271 (8%)
Query: 27 HSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
++L++ Y +++ + M +G PS ATYN L+ Y R + +LR+M
Sbjct: 383 NTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMED 442
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGK-AFEMKAKMVHKGILPDADTYGILILTLCRKGRLS 141
GL P+V +Y LI + +T K+ A + +M G+ P + +Y LI G
Sbjct: 443 LGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHE 502
Query: 142 KAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
KA+ F EM +EG+ P YT +++ + G+ K ++ I K L + I + +
Sbjct: 503 KAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLME-----IWKLMLREKIKGTRIT 557
Query: 202 YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMD 261
YN + G G EA ++ + MGL P V++Y ++ + + G+ K +L EM
Sbjct: 558 YNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM- 616
Query: 262 EKGIPLYEDIYQSLLDDLSDEVTYSTLINDF 292
+ L+ D +TYST+I F
Sbjct: 617 ------------AALNLKPDSITYSTMIYAF 635
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 8/223 (3%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKE--AVGILRDMAKRGLSPDVDT 91
Q D +L+ M G P+V +Y LI Y R + + A LR M K GL P +
Sbjct: 429 QPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHS 487
Query: 92 YYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML 151
Y LI + +G KA+ +M +GI P +TY ++ R G K +++ ML
Sbjct: 488 YTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLML 547
Query: 152 REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCV 211
RE + + Y L++ + +G + +A D+ E F G+ PS++ YN ++
Sbjct: 548 REKIKGTRITYNTLLDGFAKQGLYIEARDVVSE-----FSKMGLQPSVMTYNMLMNAYAR 602
Query: 212 LGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
G+ + +L+ MA + L PD ++Y+ +I F ++ + +AF
Sbjct: 603 GGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF 645
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 170/408 (41%), Gaps = 52/408 (12%)
Query: 54 VATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK-AFEMK 112
V YN I G + R+ +A + M K + PD T LI + G+ K +E+
Sbjct: 273 VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIF 332
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
KM KG+ D +G L+ + C +G +A + EM ++G+ + +Y LM+ Y
Sbjct: 333 EKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
+ L EM +K G+ PS YN + + + +LR M D+GL P
Sbjct: 393 NHIEEVEGLFTEMRDK-----GLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEP 447
Query: 233 DVVSYTNVIKGFCKIGEPVK-AFELKLEMDEKGIPLYEDIYQSLLDDLS----------- 280
+V SYT +I + + + A + L M + G+ Y +L+ S
Sbjct: 448 NVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS 507
Query: 281 -DEV----------TYSTLINDFHAQGN---LMDAYCLESEMSEYSYLTDDVISSVRING 326
+E+ TY+++++ F G+ LM+ + L M + + ++G
Sbjct: 508 FEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKL---MLREKIKGTRITYNTLLDG 564
Query: 327 LNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAH 386
K+ IEA R +V F + L P+ TY+ L+ ++ G
Sbjct: 565 FAKQGLYIEA-RDVVSEFSKMGLQ-PSVMTYNMLMNA---------------YARGGQDA 607
Query: 387 KAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
K + +M N KP+ Y+ +I+ R + +A+ +K V SG
Sbjct: 608 KLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSG 655
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 25/274 (9%)
Query: 41 MLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFC 100
+ + M +G S + L+ +C +EA+ I +M K+G+ + Y L+ +
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 101 QTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKY 160
++ + + + +M KG+ P A TY IL+ R+ + L EM G+ P+
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 161 IYTRLMNYYCFKGEFSKALDLPDEMINKGFL---PDGISPSLVIYNARIHGCCVLGRVEE 217
YT L++ Y G K D M FL G+ PS Y A IH V G E+
Sbjct: 451 SYTCLISAY---GRTKKMSD----MAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEK 503
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL-KLEMDEKGIPLYEDIYQSLL 276
A M G+ P V +YT+V+ F + G+ K E+ KL + EK
Sbjct: 504 AYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREK------------- 550
Query: 277 DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSE 310
+TY+TL++ F QG ++A + SE S+
Sbjct: 551 -IKGTRITYNTLLDGFAKQGLYIEARDVVSEFSK 583
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 141/350 (40%), Gaps = 35/350 (10%)
Query: 88 DVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK-AFDL 146
DV Y I G + + A+E+ M + PD T ILI TL + GR +K +++
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 147 FLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARI 206
F +M +GV + ++ L+ +C +G +AL + EM K GI + ++YN +
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKK-----GIRSNTIVYNTLM 386
Query: 207 HGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIP 266
+EE G+ M D GL P +Y ++ + + +P
Sbjct: 387 DAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQP---------------- 430
Query: 267 LYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRING 326
DI ++LL ++ D L + + L+ AY +MS+ + D ++ G
Sbjct: 431 ---DIVETLLREMED----LGLEPNVKSYTCLISAYGRTKKMSD---MAADAFLRMKKVG 480
Query: 327 LNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAH 386
L + + A L+ + AY +++ + + +T ++ F G
Sbjct: 481 LKPSSHSYTA---LIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTG 537
Query: 387 KAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
K + ML K YN L+ + G +A D+ E G++
Sbjct: 538 KLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQ 587
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
K V L P + + +H+ +KA+ + M G PSV TY ++ + R+
Sbjct: 477 KKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDT 536
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
+ + I + M + + TY L+ GF + G +A ++ ++ G+ P TY +L
Sbjct: 537 GKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNML 596
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
+ R G+ +K L EM + P Y+ ++ + +F +A M+ G
Sbjct: 597 MNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQ 656
Query: 191 LPD 193
+PD
Sbjct: 657 VPD 659
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
K + K M+ + TYN L+ G+ + + EA ++ + +K GL P V TY L+
Sbjct: 538 KLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLM 597
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
+ + G+ K ++ +M + PD+ TY +I R +AF M++ G
Sbjct: 598 NAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQV 657
Query: 157 PHKYIYTRL 165
P Y +L
Sbjct: 658 PDPRSYEKL 666
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 5/266 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD+ + ++ ++D+A + M PSV +Y +I GY DR + +
Sbjct: 286 ISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGL 345
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILP-DADTYGILILT 133
I +M G+ P+ TY L+ G C GK+ +A + M+ K I P D + L+++
Sbjct: 346 RIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVS 405
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL-- 191
+ G ++ A ++ M V Y L+ C +++A+ L D +I K +
Sbjct: 406 QSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILR 465
Query: 192 -PDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEP 250
D + YN I C G+ +A + R + G+ D + N+I+G K G P
Sbjct: 466 HQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNP 524
Query: 251 VKAFELKLEMDEKGIPLYEDIYQSLL 276
++E+ M +G+P + Y+ L+
Sbjct: 525 DSSYEILKIMSRRGVPRESNAYELLI 550
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 169/415 (40%), Gaps = 31/415 (7%)
Query: 23 LSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
+ + L V +++ A +L M +G + LI Y +A +E+V I + M
Sbjct: 154 MKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKD 213
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
G+ + +Y L + G+ A KMV +G+ P TY +++ RL
Sbjct: 214 LGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLET 273
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIY 202
A F +M G+SP + ++N +C + +A L EM KG + I PS+V Y
Sbjct: 274 ALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM--KG---NKIGPSVVSY 328
Query: 203 NARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
I G + RV++ L I M G+ P+ +Y+ ++ G C G+ V+A + M
Sbjct: 329 TTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMA 388
Query: 263 KGI-PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISS 321
K I P I+ LL S + A L + +E Y L ++ +
Sbjct: 389 KHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATL----NVPAEAGHYGVLIENQCKA 444
Query: 322 VRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFS 380
N K T+ K ++R +QD L + Y+ +IE C+N + L +
Sbjct: 445 SAYNRAIKLLDTLIEKEIILR--HQDTLEMEPS-AYNPIIEYLCNNGQTAKAEVLFRQLM 501
Query: 381 MRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
RG+ + A N LI H + GN +Y++ K GV
Sbjct: 502 KRGVQDQDA-----------------LNNLIRGHAKEGNPDSSYEILKIMSRRGV 539
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 177/384 (46%), Gaps = 32/384 (8%)
Query: 56 TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM 115
T+ ++I + A IL DM ++G+ D D + LI + + G + ++ ++ KM
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
G+ +Y L + R+GR A F +M+ EGV P ++ Y ++ +
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRL 271
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
AL ++M + GISP +N I+G C +++EA + M + P VV
Sbjct: 272 ETALRFFEDMKTR-----GISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVV 326
Query: 236 SYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQ 295
SYT +IKG+ L ++ + G+ ++E++ S ++ + TYSTL+
Sbjct: 327 SYTTMIKGY-----------LAVDRVDDGLRIFEEMRSSGIE--PNATTYSTLLPGLCDA 373
Query: 296 GNLMDAY-CLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAY 354
G +++A L++ M+++ D+ I +++ KA + A +++ L++PA
Sbjct: 374 GKMVEAKNILKNMMAKHIAPKDNSI-FLKLLVSQSKAGDMAAATEVLKAMA--TLNVPAE 430
Query: 355 RT-YDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIF 412
Y LIEN C + + + L+ + + + H L + E + YN +I
Sbjct: 431 AGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILR----HQDTL----EMEPSAYNPIIE 482
Query: 413 DHCRHGNVHKAYDMYKETVHSGVE 436
C +G KA ++++ + GV+
Sbjct: 483 YLCNNGQTAKAEVLFRQLMKRGVQ 506
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 159/404 (39%), Gaps = 22/404 (5%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V ++ + + M G ++ +YN L R R+ A M G+ P TY
Sbjct: 201 VQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNL 260
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
++ GF + +L A M +GI PD T+ +I CR ++ +A LF+EM
Sbjct: 261 MLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNK 320
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+ P YT ++ Y L + +EM + GI P+ Y+ + G C G+
Sbjct: 321 IGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRS-----SGIEPNATTYSTLLPGLCDAGK 375
Query: 215 VEEALGILRGMADMGLSP-DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
+ EA IL+ M ++P D + ++ K G+ A E+ M +P Y
Sbjct: 376 MVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYG 435
Query: 274 SLLDDLSDEVTYSTLIN--DFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKA 331
L+++ Y+ I D + ++ + EM +Y + +I + NG KA
Sbjct: 436 VLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAY--NPIIEYLCNNGQTAKA 493
Query: 332 TTI------------EAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDF 379
+ +A +L+R ++ +Y + E L+K +
Sbjct: 494 EVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSY 553
Query: 380 SMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKA 423
+G A A D M+ + P+ +++ +I G V A
Sbjct: 554 MSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTA 597
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 125/339 (36%), Gaps = 57/339 (16%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR--------GLSPDV 89
A +LK M Y LI C+A + A+ +L + ++ L +
Sbjct: 415 ATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEP 474
Query: 90 DTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLE 149
Y P+I C G+ KA + +++ +G+ D D LI ++G ++++
Sbjct: 475 SAYNPIIEYLCNNGQTAKAEVLFRQLMKRGV-QDQDALNNLIRGHAKEGNPDSSYEILKI 533
Query: 150 MLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD---------------- 193
M R GV Y L+ Y KGE A D M+ G +PD
Sbjct: 534 MSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGR 593
Query: 194 ----------------GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSY 237
GI ++ + + + G VEEALG + + G + D+ S
Sbjct: 594 VQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSL 653
Query: 238 TNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGN 297
+V+ K +K + LE D + L Y +LD L G
Sbjct: 654 LSVLSEKGKTIAALKLLDFGLERD---LSLEFSSYDKVLDAL-------------LGAGK 697
Query: 298 LMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEA 336
++AY + ++ E TD S I LN++ T +A
Sbjct: 698 TLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQA 736
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 24/281 (8%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ L N Q KA + + ++ RG A N LI G+ + + IL+ M++RG+
Sbjct: 481 IEYLCNNGQTAKAEVLFRQLMKRGVQDQDA-LNNLIRGHAKEGNPDSSYEILKIMSRRGV 539
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
+ + Y LI + G+ G A MV G +PD+ + +I +L GR+ A
Sbjct: 540 PRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASR 599
Query: 146 LFLEMLRE--GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
+ + M+ + G+ + + +++ +G +AL D + G D + L + +
Sbjct: 600 VMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTAD-LDSLLSVLS 658
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
+ G+ AL +L + LS + SY V+ G+ + A+ + ++ EK
Sbjct: 659 EK-------GKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEK 711
Query: 264 GIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCL 304
G +D + LI + +GN A L
Sbjct: 712 GSS-------------TDWKSSDELIKSLNQEGNTKQADVL 739
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 18/219 (8%)
Query: 41 MLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFC 100
M K M A YN +IHG C+A +F EA I ++ GL PDV TY +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 101 QTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKY 160
+ LG+A ++ A+M+ +G++PD TY +I LC++ +L++A VS
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 161 IYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALG 220
+ L+N YC ++L EM + GI +++ Y IHG +G AL
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRR-----GIVANVITYTTLIHGFRQVGDFNTALD 162
Query: 221 ILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
I + M G+ +++ +++ C E KA + L+
Sbjct: 163 IFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+ + M + + D Y +I G C+ GK +A + ++ G+ PD TY ++I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
R L +A L+ EM+R G+ P Y +++ C + + ++A +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK--------------V 102
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
S S +N I+G C RV++ + + M G+ +V++YT +I GF ++G+ A +
Sbjct: 103 SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALD 162
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDL 279
+ EM G+ ++ +L L
Sbjct: 163 IFQEMVSNGVYSSSITFRDILPQL 186
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 15 LDPDER--NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKE 72
L PD + N++ + SL +A + MI RG P TYN +IHG C+ ++ +
Sbjct: 45 LQPDVQTYNMMIRFSSL------GRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQ 98
Query: 73 AVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILIL 132
A R +S T+ LI G+C+ ++ + +M +GI+ + TY LI
Sbjct: 99 A---------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIH 149
Query: 133 TLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDL 181
+ G + A D+F EM+ GV + ++ C + E KA+ +
Sbjct: 150 GFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAM 198
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD S +H L ++ +A R S S +T+N LI+GYC+A R K+ +
Sbjct: 76 LVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKDGM 126
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ +M +RG+ +V TY LI GF Q G A ++ +MV G+ + T+ ++ L
Sbjct: 127 NLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQL 186
Query: 135 CRKGRLSKAFDLFLE 149
C + L KA + L+
Sbjct: 187 CSRKELRKAVAMLLQ 201
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 33/188 (17%)
Query: 123 DADT--YGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALD 180
D DT Y I+I LC+ G+ +A ++F +L G+ P Y ++ + +A
Sbjct: 11 DMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF----SSLGRAEK 66
Query: 181 LPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNV 240
L EMI +G +PD I+ YN+ IHG C ++ +A + S ++ +
Sbjct: 67 LYAEMIRRGLVPDTIT-----YNSMIHGLCKQNKLAQARKV---------SKSCSTFNTL 112
Query: 241 IKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMD 300
I G+CK L EM +GI +++ +TY+TLI+ F G+
Sbjct: 113 INGYCKATRVKDGMNLFCEMYRRGI-------------VANVITYTTLIHGFRQVGDFNT 159
Query: 301 AYCLESEM 308
A + EM
Sbjct: 160 ALDIFQEM 167
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 21/262 (8%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
+P+ T+N IHG+C+A+R +EA+ +++M G P V +Y +I +CQ + K +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
EM ++M G P++ TY ++ +L + +A + M R G P Y L++
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 170 CFKGEFSKALDLPDEMINKGFLPD-GISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
G +A E + + +P+ G+S + YN+ I C ++A+ +L+ M
Sbjct: 340 ARAGRLEEA-----ERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 229 GL-SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYST 287
L +PDV +Y +++ K G+ V+ +L EM K + SL DE TY+
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKH-------HLSL-----DESTYTF 442
Query: 288 LINDFHAQGNLMD-AYCLESEM 308
LI + N+ + AYCL EM
Sbjct: 443 LIQRL-CRANMCEWAYCLFEEM 463
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 109/242 (45%), Gaps = 6/242 (2%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H +V++A ++ M GF P V +Y +I YC+ F + +L +M G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P+ TY ++ + +A + +M G PD+ Y LI TL R GRL +A
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 146 LF-LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
+F +EM GVS + Y ++ YC E KA++L EM + +P + Y
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL----CNPDVHTYQP 406
Query: 205 RIHGCCVLGRVEEALGILRGM-ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
+ C G V E +L+ M LS D +YT +I+ C+ A+ L EM +
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 264 GI 265
I
Sbjct: 467 DI 468
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 175/438 (39%), Gaps = 87/438 (19%)
Query: 26 VHSLLNVYQVD--KAHNMLKYM-IVRGFSPSVATYN---ELIHGYCRADRFKEAVGILRD 79
VH LL+ ++ D A +LK+ +G S Y+ +++ + DR KE V +R
Sbjct: 90 VHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRG 149
Query: 80 MAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
L +T ++ F G+ +A + ++ G+ + ++ +L+ TLC++ R
Sbjct: 150 DKLVTL----NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR 205
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
+ +A + L+ L I+P+
Sbjct: 206 VEQARVVLLQ-----------------------------------------LKSHITPNA 224
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
+N IHG C RVEEAL ++ M G P V+SYT +I+ +C+ E +K +E+ E
Sbjct: 225 HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSE 284
Query: 260 MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
M+ G P + +TY+T+++ +AQ +A + + M D +
Sbjct: 285 MEANGSP-------------PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 320 SSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKD 378
+ I+ L + EA+R + +SI TY+++I C ++E + L+K+
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELGVSINT-STYNSMIAMYCHHDEEDKAIELLKE 390
Query: 379 FSMRGLAHKAAKAHDKMLHGNYKP---------------------EGAIYNLLIFDHCRH 417
L + + +L +K + + Y LI CR
Sbjct: 391 MESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Query: 418 GNVHKAYDMYKETVHSGV 435
AY +++E + +
Sbjct: 451 NMCEWAYCLFEEMISQDI 468
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 21/262 (8%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
+P+ T+N IHG+C+A+R +EA+ +++M G P V +Y +I +CQ + K +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
EM ++M G P++ TY ++ +L + +A + M R G P Y L++
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 170 CFKGEFSKALDLPDEMINKGFLPD-GISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
G +A E + + +P+ G+S + YN+ I C ++A+ +L+ M
Sbjct: 340 ARAGRLEEA-----ERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 229 GL-SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYST 287
L +PDV +Y +++ K G+ V+ +L EM K + SL DE TY+
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKH-------HLSL-----DESTYTF 442
Query: 288 LINDFHAQGNLMD-AYCLESEM 308
LI + N+ + AYCL EM
Sbjct: 443 LIQRL-CRANMCEWAYCLFEEM 463
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 109/242 (45%), Gaps = 6/242 (2%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+H +V++A ++ M GF P V +Y +I YC+ F + +L +M G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P+ TY ++ + +A + +M G PD+ Y LI TL R GRL +A
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 146 LF-LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
+F +EM GVS + Y ++ YC E KA++L EM + +P + Y
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL----CNPDVHTYQP 406
Query: 205 RIHGCCVLGRVEEALGILRGM-ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
+ C G V E +L+ M LS D +YT +I+ C+ A+ L EM +
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 264 GI 265
I
Sbjct: 467 DI 468
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 175/438 (39%), Gaps = 87/438 (19%)
Query: 26 VHSLLNVYQVD--KAHNMLKYM-IVRGFSPSVATYN---ELIHGYCRADRFKEAVGILRD 79
VH LL+ ++ D A +LK+ +G S Y+ +++ + DR KE V +R
Sbjct: 90 VHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRG 149
Query: 80 MAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
L +T ++ F G+ +A + ++ G+ + ++ +L+ TLC++ R
Sbjct: 150 DKLVTL----NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR 205
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
+ +A + L+ L I+P+
Sbjct: 206 VEQARVVLLQ-----------------------------------------LKSHITPNA 224
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
+N IHG C RVEEAL ++ M G P V+SYT +I+ +C+ E +K +E+ E
Sbjct: 225 HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSE 284
Query: 260 MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
M+ G P + +TY+T+++ +AQ +A + + M D +
Sbjct: 285 MEANGSP-------------PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 320 SSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKD 378
+ I+ L + EA+R + +SI TY+++I C ++E + L+K+
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELGVSINT-STYNSMIAMYCHHDEEDKAIELLKE 390
Query: 379 FSMRGLAHKAAKAHDKMLHGNYKP---------------------EGAIYNLLIFDHCRH 417
L + + +L +K + + Y LI CR
Sbjct: 391 MESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Query: 418 GNVHKAYDMYKETVHSGV 435
AY +++E + +
Sbjct: 451 NMCEWAYCLFEEMISQDI 468
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 162/390 (41%), Gaps = 25/390 (6%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G P TYN L+ R AV + DM PD+ TY +I + + G +A
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ ++ KG PDA TY L+ R+ K +++ +M + G + Y +++
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
Y +G+ AL L +M KG G +P + Y I R EA ++ M D+
Sbjct: 412 YGKQGQLDLALQLYKDM--KGL--SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL--SDEVT-- 284
G+ P + +Y+ +I G+ K G+ +A + M G Y +LD L +E
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Query: 285 ---YSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVR----INGLNKKATTIEAK 337
Y +I+D H + + M E +DD+ ++R + G+N +E
Sbjct: 528 WGLYRDMISDGHTPSYTLYELMILGLMKENR--SDDIQKTIRDMEELCGMN----PLEIS 581
Query: 338 RSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLH 397
LV+ +C + A R I N E T++ ++ +S G +A + + +
Sbjct: 582 SVLVK---GECFDLAA-RQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKE 637
Query: 398 GNYKPEGAIYNLLIFDHCRHGNVHKAYDMY 427
+ I LI HC+ N+ A D Y
Sbjct: 638 HASGSKRLITEALIVLHCKVNNLSAALDEY 667
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 158/363 (43%), Gaps = 42/363 (11%)
Query: 27 HSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI-LRDMA 81
++++ VY + KA ++ M RG P + ++N LI+ ++ + + L DM
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV 288
Query: 82 KR-GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRL 140
+ GL PD TY L+ + L A ++ M PD TY +I R G
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 141 SKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
++A LF+E+ +G P Y L+ + + K ++ +M GF D ++
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT---- 404
Query: 201 IYNARIHGCCVLGRVEEALGILRGMADM-GLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
YN IH G+++ AL + + M + G +PD ++YT +I K V+A L E
Sbjct: 405 -YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 260 MDEKGI-PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDV 318
M + GI P + TYS LI + G +A S M D++
Sbjct: 464 MLDVGIKPTLQ--------------TYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 319 ISSVRINGLNKKATTIEAKRSLVRW-FYQDCLS---IPAYRTYDTLI-----ENCSNNEF 369
SV ++ L + T +A W Y+D +S P+Y Y+ +I EN S++
Sbjct: 510 AYSVMLDVLLRGNETRKA------WGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQ 563
Query: 370 KTV 372
KT+
Sbjct: 564 KTI 566
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 149/362 (41%), Gaps = 47/362 (12%)
Query: 89 VDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDL-F 147
V Y ++ + ++GK KA E+ M +G +PD ++ LI + G L+ +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 148 LEMLR-EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARI 206
L+M+R G+ P Y L++ A+ + ++M PD L YNA I
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPD-----LWTYNAMI 339
Query: 207 --HGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
+G C G EA + + G PD V+Y +++ F + K E+ +M + G
Sbjct: 340 SVYGRC--GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 265 IPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVIS-SVR 323
DE+TY+T+I+ + QG L A L +M S D I+ +V
Sbjct: 398 FG-------------KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVL 444
Query: 324 INGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRG 383
I+ L K T+EA + D P +TY LI C ++ G
Sbjct: 445 IDSLGKANRTVEAAALMSEML--DVGIKPTLQTYSALI--CG-------------YAKAG 487
Query: 384 LAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPS 443
+A ML KP+ Y++++ R KA+ +Y++ + G PS
Sbjct: 488 KREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG-----HTPS 542
Query: 444 FT 445
+T
Sbjct: 543 YT 544
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 5/232 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+V A M+ M F +A +N ++ Y + +K+ V + + + + GL PD TY
Sbjct: 907 RVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYN 966
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI +C+ + + + + +M + G+ P DTY LI ++ L +A LF E+L +
Sbjct: 967 TLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSK 1026
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ + Y +M G SKA L M N GI P+L + + G
Sbjct: 1027 GLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA-----GIEPTLATMHLLMVSYSSSG 1081
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
+EA +L + D + + Y++VI + + + E LEM ++G+
Sbjct: 1082 NPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGL 1133
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 179/407 (43%), Gaps = 44/407 (10%)
Query: 36 DKAHNMLKYMIVRGFSPSVA-TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+ AH ++ +GF + + Y ++I Y + +++A ++ ++ + G +PD+ T+
Sbjct: 733 ETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNS 792
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
L+ + Q G +A + M+ G P ++ IL+ LC GRL + + + E+ G
Sbjct: 793 LMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMG 852
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
K +++ + G + + M G+L P++ +Y I C R
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL-----PTIRLYRMMIELLCKGKR 907
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
V +A ++ M + ++ + +++K + I E +K + +Y+ I ++
Sbjct: 908 VRDAEIMVSEMEEANFKVELAIWNSMLKMYTAI-----------EDYKKTVQVYQRIKET 956
Query: 275 LLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTI 334
L+ DE TY+TLI +M YC + E YL ++ +R GL+ K +
Sbjct: 957 GLE--PDETTYNTLI--------IM--YCRDRR-PEEGYL---LMQQMRNLGLDPK---L 997
Query: 335 EAKRSLVRWF-YQDCLSIPAYRTYDTLIE---NCSNNEFKTVVGLVKDFSMRGLAHKAAK 390
+ +SL+ F Q CL A + ++ L+ + + T++ + +D G KA K
Sbjct: 998 DTYKSLISAFGKQKCLE-QAEQLFEELLSKGLKLDRSFYHTMMKISRD---SGSDSKAEK 1053
Query: 391 AHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
M + +P A +LL+ + GN +A + + VE+
Sbjct: 1054 LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVEL 1100
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 113/258 (43%), Gaps = 9/258 (3%)
Query: 23 LSQVHSLLNVYQV----DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILR 78
L +SL++ Y ++A + M+ G SP+V + N L+H C R +E ++
Sbjct: 787 LKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVE 846
Query: 79 DMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKG 138
++ G + ++ F + G + + ++ + M G LP Y ++I LC+
Sbjct: 847 ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK 906
Query: 139 RLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPS 198
R+ A + EM I+ ++ Y ++ K + + + G PD +
Sbjct: 907 RVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETT-- 964
Query: 199 LVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKL 258
YN I C R EE +++ M ++GL P + +Y ++I F K +A +L
Sbjct: 965 ---YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFE 1021
Query: 259 EMDEKGIPLYEDIYQSLL 276
E+ KG+ L Y +++
Sbjct: 1022 ELLSKGLKLDRSFYHTMM 1039
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMI-VRGFSPSVATYNELIHGYCRADRFKEAVGI 76
DE + +H Q+D A + K M + G +P TY LI +A+R EA +
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
+ +M G+ P + TY LICG+ + GK +A + + M+ G PD Y +++ L R
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIY 162
KA+ L+ +M+ +G +P +Y
Sbjct: 521 GNETRKAWGLYRDMISDGHTPSYTLY 546
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 173/448 (38%), Gaps = 55/448 (12%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + LL + KA + + MI G +PS Y +I G + +R +
Sbjct: 506 PDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKT 565
Query: 77 LRDMAKR-GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILP----DADTYGILI 131
+RDM + G++P ++ L+ G C F++ A+ + I + DT ++
Sbjct: 566 IRDMEELCGMNP-LEISSVLVKGEC--------FDLAARQLKVAITNGYELENDTLLSIL 616
Query: 132 LTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR-LMNYYCFKGEFSKALDLPDEMINKGF 190
+ GR S+AF+L LE L+E S K + T L+ +C S AL DE
Sbjct: 617 GSYSSSGRHSEAFEL-LEFLKEHASGSKRLITEALIVLHCKVNNLSAAL---DEYFADPC 672
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEP 250
+ S +Y +H C EA + + G +++ +CK+G P
Sbjct: 673 VHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFP 732
Query: 251 VKAFELKLEMDEKGI-----PLYEDIYQSL--------LDDLSDEVTYSTLINDFHAQGN 297
A ++ + + KG P+Y DI ++ + + + S D +
Sbjct: 733 ETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNS 792
Query: 298 LMDAY----CLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPA 353
LM AY C E + ++ + D S T+E+ L+ D
Sbjct: 793 LMSAYAQCGCYERARAIFNTMMRDGPSP-----------TVESINILLHALCVDGRLEEL 841
Query: 354 YRTYDTLIENCSNNEFK----TVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNL 409
Y ++E + FK +++ ++ F+ G + K + M Y P +Y +
Sbjct: 842 Y----VVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRM 897
Query: 410 LIFDHCRHGNVHKAYDMYKETVHSGVEI 437
+I C+ V A M E + ++
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKV 925
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD + SL + +A ++ M+ G P++ TY+ LI GY +A + +EA
Sbjct: 435 NPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAED 494
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
M + G PD Y ++ + + KA+ + M+ G P Y ++IL L
Sbjct: 495 TFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLM 554
Query: 136 RKGR 139
++ R
Sbjct: 555 KENR 558
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 158/379 (41%), Gaps = 44/379 (11%)
Query: 57 YNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMV 116
YNE+I + +F A ++ M R + ++T+ LI + + G +A +M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 117 HKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFS 176
G +PD + I+I L RK R S+A F + L++ P +YT L+ +C GE S
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEA-QSFFDSLKDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 177 KALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVS 236
+A E + K GI P++ Y+ I C G++ A + M D G +P+ ++
Sbjct: 273 EA-----EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT 327
Query: 237 YTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQG 296
+ N+++ K G K ++ +M + G D +TY+ LI
Sbjct: 328 FNNLMRVHVKAGRTEKVLQVYNQMKKLGCE-------------PDTITYNFLI------- 367
Query: 297 NLMDAYCLESEMSEYSYLTDDVIS---SVRINGLNKKATTIEAKRSLVRWFYQDCLSIPA 353
+A+C + + + + +I V + N IE KR + A
Sbjct: 368 ---EAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVN----------GA 414
Query: 354 YRTYDTLIE-NCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIF 412
+R Y ++E C N T L++ F K +M +P Y LL+
Sbjct: 415 HRMYSKMMEAKCEPNTV-TYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVT 473
Query: 413 DHCRHGNVHKAYDMYKETV 431
C G+ + AY ++KE V
Sbjct: 474 MFCGMGHWNNAYKLFKEMV 492
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 18/266 (6%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
F P V Y L+ G+CRA EA + ++M G+ P+V TY +I C+ G++ +A
Sbjct: 251 FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAH 310
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
++ A M+ G P+A T+ L+ + GR K ++ +M + G P Y L+ +
Sbjct: 311 DVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAH 370
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
C A+ + + MI K + + +N V A + M +
Sbjct: 371 CRDENLENAVKVLNTMIKKKCEVNAST-----FNTIFRYIEKKRDVNGAHRMYSKMMEAK 425
Query: 230 LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLI 289
P+ V+Y +++ F ++K EMD+K + + TY L+
Sbjct: 426 CEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVE-------------PNVNTYRLLV 472
Query: 290 NDFHAQGNLMDAYCLESEMSEYSYLT 315
F G+ +AY L EM E LT
Sbjct: 473 TMFCGMGHWNNAYKLFKEMVEEKCLT 498
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 6/247 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++ +A + K M + G P+V TY+ +I CR + A + DM G +P+ T+
Sbjct: 270 EISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFN 329
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ + G+ K ++ +M G PD TY LI CR L A + M+++
Sbjct: 330 NLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
+ + + Y K + + A + +M+ P+ V YN +
Sbjct: 390 KCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA-----KCEPNTVTYNILMRMFVGSK 444
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM-DEKGIPLYEDIY 272
+ L + + M D + P+V +Y ++ FC +G A++L EM +EK + +Y
Sbjct: 445 STDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLY 504
Query: 273 QSLLDDL 279
+ +L L
Sbjct: 505 EMVLAQL 511
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 6/241 (2%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ +L Q+ +AH++ M+ G +P+ T+N L+ + +A R ++ + + M K G
Sbjct: 297 IDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGC 356
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD TY LI C+ L A ++ M+ K +A T+ + + +K ++ A
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHR 416
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
++ +M+ P+ Y LM + L + EM +K + P++ Y
Sbjct: 417 MYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDK-----EVEPNVNTYRLL 471
Query: 206 IHGCCVLGRVEEALGILRGMADMG-LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
+ C +G A + + M + L+P + Y V+ + G+ K EL +M +KG
Sbjct: 472 VTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Query: 265 I 265
+
Sbjct: 532 L 532
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 47/280 (16%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
F+P++ TY L++G+CR EA I DM GL PD+ + ++ G ++ K A
Sbjct: 293 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 352
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
++ M KG P+ +Y I+I C++ + A + F +M+ G+ P +YT L+ +
Sbjct: 353 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 412
Query: 170 CFKGEFSKALDLPDEMINKGFLPDG------------------------------ISPSL 199
+ + +L EM KG PDG I PS+
Sbjct: 413 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI 472
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
+N + V E + M G+ PD SYT +I+G G+ +A E
Sbjct: 473 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEE 532
Query: 260 MDEKGI--PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGN 297
M +KG+ PL + Y+ DFH G
Sbjct: 533 MLDKGMKTPL---------------IDYNKFAADFHRGGQ 557
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 5/225 (2%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ LL + A + M +G P+V +Y +I +C+ + A+ DM GL
Sbjct: 339 LEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 398
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD Y LI GF KL +E+ +M KG PD TY LI + +
Sbjct: 399 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTR 458
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
++ +M++ + P + + +M Y + + DEMI KG PD S Y
Sbjct: 459 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNS-----YTVL 513
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEP 250
I G G+ EA L M D G+ ++ Y F + G+P
Sbjct: 514 IRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP 558
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 19/304 (6%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
KA + + M F V T N L+ RA KEA +L D K +P++ TY L+
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLL 304
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
G+C+ L +A + M+ G+ PD + +++ L R + S A LF M +G
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P+ YT ++ +C + A++ D+M++ G PD +Y I G +++
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA-----AVYTCLITGFGTQKKLD 419
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
+L+ M + G PD +Y +IK +M E G +Y + Q+ +
Sbjct: 420 TVYELLKEMQEKGHPPDGKTYNALIK-----------LMANQKMPEHGTRIYNKMIQNEI 468
Query: 277 DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEA 336
+ T++ ++ + N + EM + DD +V I GL + + EA
Sbjct: 469 EPSIH--TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Query: 337 KRSL 340
R L
Sbjct: 527 CRYL 530
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 159/393 (40%), Gaps = 45/393 (11%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK 107
+GF+ TYN ++ + +F+ V +L +M +GL ++T+ + F + K
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 246
Query: 108 A---FEMKAKMVHK-GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYT 163
A FE+ K K G+ +T L+ +L R +L K + + L+E +P+ YT
Sbjct: 247 AVGIFELMKKYKFKIGV----ETINCLLDSLGR-AKLGKEAQVLFDKLKERFTPNMMTYT 301
Query: 164 RLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILR 223
L+N +C +A + ++MI+ G PD +V +N + G + +A+ +
Sbjct: 302 VLLNGWCRVRNLIEAARIWNDMIDHGLKPD-----IVAHNVMLEGLLRSMKKSDAIKLFH 356
Query: 224 GMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEV 283
M G P+V SYT +I+ FCK E I ++D+ S L D
Sbjct: 357 VMKSKGPCPNVRSYTIMIRDFCKQSSM-----------ETAIEYFDDMVDSGLQ--PDAA 403
Query: 284 TYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRW 343
Y+ LI F Q L Y L EM E + D + +L++
Sbjct: 404 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG-----------------KTYNALIKL 446
Query: 344 FYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPE 403
+ R Y+ +I+N T ++K + + D+M+ P+
Sbjct: 447 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 506
Query: 404 GAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
Y +LI G +A +E + G++
Sbjct: 507 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 539
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 47/280 (16%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
F+P++ TY L++G+CR EA I DM GL PD+ + ++ G ++ K A
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 353
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
++ M KG P+ +Y I+I C++ + A + F +M+ G+ P +YT L+ +
Sbjct: 354 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 170 CFKGEFSKALDLPDEMINKGFLPDG------------------------------ISPSL 199
+ + +L EM KG PDG I PS+
Sbjct: 414 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI 473
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
+N + V E + M G+ PD SYT +I+G G+ +A E
Sbjct: 474 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEE 533
Query: 260 MDEKGI--PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGN 297
M +KG+ PL + Y+ DFH G
Sbjct: 534 MLDKGMKTPL---------------IDYNKFAADFHRGGQ 558
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 5/225 (2%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ LL + A + M +G P+V +Y +I +C+ + A+ DM GL
Sbjct: 340 LEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 399
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD Y LI GF KL +E+ +M KG PD TY LI + +
Sbjct: 400 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTR 459
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
++ +M++ + P + + +M Y + + DEMI KG PD S Y
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNS-----YTVL 514
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEP 250
I G G+ EA L M D G+ ++ Y F + G+P
Sbjct: 515 IRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP 559
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 19/304 (6%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
KA + + M F V T N L+ RA KEA +L D K +P++ TY L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLL 305
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
G+C+ L +A + M+ G+ PD + +++ L R + S A LF M +G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P+ YT ++ +C + A++ D+M++ G PD +Y I G +++
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA-----AVYTCLITGFGTQKKLD 420
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
+L+ M + G PD +Y +IK +M E G +Y + Q+ +
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIK-----------LMANQKMPEHGTRIYNKMIQNEI 469
Query: 277 DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEA 336
+ T++ ++ + N + EM + DD +V I GL + + EA
Sbjct: 470 EPSIH--TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Query: 337 KRSL 340
R L
Sbjct: 528 CRYL 531
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 160/393 (40%), Gaps = 45/393 (11%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK 107
+GF+ + TYN ++ + +F+ V +L +M +GL ++T+ + F + K
Sbjct: 189 QGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 247
Query: 108 A---FEMKAKMVHK-GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYT 163
A FE+ K K G+ +T L+ +L R +L K + + L+E +P+ YT
Sbjct: 248 AVGIFELMKKYKFKIGV----ETINCLLDSLGR-AKLGKEAQVLFDKLKERFTPNMMTYT 302
Query: 164 RLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILR 223
L+N +C +A + ++MI+ G PD +V +N + G + +A+ +
Sbjct: 303 VLLNGWCRVRNLIEAARIWNDMIDHGLKPD-----IVAHNVMLEGLLRSMKKSDAIKLFH 357
Query: 224 GMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEV 283
M G P+V SYT +I+ FCK E I ++D+ S L D
Sbjct: 358 VMKSKGPCPNVRSYTIMIRDFCKQSSM-----------ETAIEYFDDMVDSGLQ--PDAA 404
Query: 284 TYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRW 343
Y+ LI F Q L Y L EM E + D + +L++
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG-----------------KTYNALIKL 447
Query: 344 FYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPE 403
+ R Y+ +I+N T ++K + + D+M+ P+
Sbjct: 448 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 507
Query: 404 GAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
Y +LI G +A +E + G++
Sbjct: 508 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 540
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 115/258 (44%), Gaps = 5/258 (1%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
S +H+L +V A+ +++ MI +G P TY L++G+C A + KEA L +M++R
Sbjct: 187 SLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRR 246
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
G +P LI G G L A EM +KM G +PD T+ ILI + + G +
Sbjct: 247 GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFC 306
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
+++ + G+ Y L+ G+ +A L + + G P PSL Y
Sbjct: 307 IEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKP---FPSL--YA 361
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
I G C G ++A M P+ YT +I + G+ V A +EM E
Sbjct: 362 PIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEM 421
Query: 264 GIPLYEDIYQSLLDDLSD 281
G+ + + D L +
Sbjct: 422 GLVPISRCFDMVTDGLKN 439
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 5/228 (2%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G +V YN L+H C F A ++R M ++GL PD TY L+ G+C GK+ +A
Sbjct: 177 GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEA 236
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
E +M +G P A +LI L G L A ++ +M + G P + L+
Sbjct: 237 QEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEA 296
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
GE +++ G D + Y I +G+++EA +L +
Sbjct: 297 ISKSGEVEFCIEMYYTACKLGLCVD-----IDTYKTLIPAVSKIGKIDEAFRLLNNCVED 351
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
G P Y +IKG C+ G AF +M K P +Y L+
Sbjct: 352 GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI 399
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 6/252 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD+R V+ + ++ +A L M RGF+P + LI G A + A
Sbjct: 213 LKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAK 272
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
++ M K G PD+ T+ LI ++G++ EM G+ D DTY LI +
Sbjct: 273 EMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAV 332
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ G++ +AF L + +G P +Y ++ C G F A +M K
Sbjct: 333 SKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAH---- 388
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
P+ +Y I C G+ +A L M +MGL P + V G G+ A
Sbjct: 389 -PPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAM 447
Query: 255 EL-KLEMDEKGI 265
+ +LE+ +G+
Sbjct: 448 RIEQLEVQLRGV 459
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 30/340 (8%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
++P+ Y EL +++ IL+ M L +T +I + + G + +A
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 110 EMKAKMVHK-GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
E+ + G D Y L+ LC A+ L M+R+G+ P K Y L+N
Sbjct: 167 ELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG 226
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+C G+ +A + DEM +GF P L+ I G G +E A ++ M
Sbjct: 227 WCSAGKMKEAQEFLDEMSRRGFNPPARGRDLL-----IEGLLNAGYLESAKEMVSKMTKG 281
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS-----DEV 283
G PD+ ++ +I+ K GE E+ + G+ + D Y++L+ +S DE
Sbjct: 282 GFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA 341
Query: 284 -----------------TYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRING 326
Y+ +I G DA+ S+M ++ + + ++ I
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITM 401
Query: 327 LNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSN 366
+ ++A LV + +P R +D + + N
Sbjct: 402 CGRGGKFVDAANYLVEM--TEMGLVPISRCFDMVTDGLKN 439
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 47/280 (16%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
F+P++ TY L++G+CR EA I DM +GL PD+ + ++ G ++ K A
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 353
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
++ M KG P+ +Y I+I C++ + A + F +M+ G+ P +YT L+ +
Sbjct: 354 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 170 CFKGEFSKALDLPDEMINKGFLPDG------------------------------ISPSL 199
+ + +L EM KG PDG I PS+
Sbjct: 414 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSI 473
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
+N + + E + M G+ PD SYT +I+G G+ +A E
Sbjct: 474 HTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEE 533
Query: 260 MDEKGI--PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGN 297
M +KG+ PL + Y+ DFH G
Sbjct: 534 MLDKGMKTPL---------------IDYNKFAADFHRGGQ 558
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 5/225 (2%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ LL + A + M +G P+V +Y +I +C+ + A+ DM GL
Sbjct: 340 LEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 399
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD Y LI GF KL +E+ +M KG PD TY LI + + A
Sbjct: 400 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATR 459
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
++ +M++ + P + + +M Y + + +EMI KG PD S Y
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNS-----YTVL 514
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEP 250
I G G+ EA L M D G+ ++ Y F + G+P
Sbjct: 515 IRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP 559
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 161/393 (40%), Gaps = 45/393 (11%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK 107
+GF+ TYN ++ + +F+ V +L +M +GL ++T+ + F + K
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 247
Query: 108 A---FEMKAKMVHK-GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYT 163
A FE+ K K G+ +T L+ +L R +L K + + L+E +P+ YT
Sbjct: 248 AVGIFELMKKYKFKIGV----ETINCLLDSLGR-AKLGKEAQVLFDKLKERFTPNMMTYT 302
Query: 164 RLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILR 223
L+N +C +A + ++MI++G PD +V +N + G + +A+ +
Sbjct: 303 VLLNGWCRVRNLIEAARIWNDMIDQGLKPD-----IVAHNVMLEGLLRSRKKSDAIKLFH 357
Query: 224 GMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEV 283
M G P+V SYT +I+ FCK E I ++D+ S L D
Sbjct: 358 VMKSKGPCPNVRSYTIMIRDFCKQSSM-----------ETAIEYFDDMVDSGLQ--PDAA 404
Query: 284 TYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRW 343
Y+ LI F Q L Y L EM E + D + +L++
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG-----------------KTYNALIKL 447
Query: 344 FYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPE 403
+ A R Y+ +I+N T ++K + M ++M+ P+
Sbjct: 448 MANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPD 507
Query: 404 GAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
Y +LI G +A +E + G++
Sbjct: 508 DNSYTVLIRGLIGEGKSREACRYLEEMLDKGMK 540
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 19/304 (6%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
KA + + M F V T N L+ RA KEA +L D K +P++ TY L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLL 305
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
G+C+ L +A + M+ +G+ PD + +++ L R + S A LF M +G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P+ YT ++ +C + A++ D+M++ G PD +Y I G +++
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA-----AVYTCLITGFGTQKKLD 420
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
+L+ M + G PD +Y +IK +M E +Y + Q+ +
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIK-----------LMANQKMPEHATRIYNKMIQNEI 469
Query: 277 DDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEA 336
+ T++ ++ + N + EM + DD +V I GL + + EA
Sbjct: 470 EPSIH--TFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527
Query: 337 KRSL 340
R L
Sbjct: 528 CRYL 531
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 14/236 (5%)
Query: 2 MITASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELI 61
MI A C PD V L +VD+A +++ M P+ Y+ L+
Sbjct: 263 MIDAGC--------HPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 314
Query: 62 HGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGIL 121
H Y +R +EAV +M + G+ DV + LI FC+ ++ + + +M KG+
Sbjct: 315 HTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT 374
Query: 122 PDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDL 181
P++ + I++ L +G +AFD+F +M++ P YT ++ +C K E A
Sbjct: 375 PNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETA--- 430
Query: 182 PDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSY 237
+ + K G+ PS+ ++ I+G C ++A +L M +MG+ P V++
Sbjct: 431 --DKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 20/303 (6%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+VD+A M P++ +N L+ C++ ++A + +M R +PD TY
Sbjct: 183 KVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYS 241
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
L+ G+ + L KA E+ +M+ G PD TY I++ LC+ GR+ +A + M
Sbjct: 242 ILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPS 301
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
P +IY+ L++ Y + +A+D EM G D + ++N+ I C
Sbjct: 302 ICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKAD-----VAVFNSLIGAFCKAN 356
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
R++ +L+ M G++P+ S +++ + GE +AF++ +M + P
Sbjct: 357 RMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEP------- 409
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT 333
D TY+ +I F + + A + M + SV INGL ++ TT
Sbjct: 410 -------DADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTT 462
Query: 334 IEA 336
+A
Sbjct: 463 QKA 465
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 35/196 (17%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
VH+ ++++A + M G VA +N LI +C+A+R K +L++M +G+
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 86 SP----------------------------------DVDTYYPLICGFCQTGKLGKAFEM 111
+P D DTY +I FC+ ++ A ++
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKV 433
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
M KG+ P T+ +LI LC + KA L EM+ G+ P + RL
Sbjct: 434 WKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLL-I 492
Query: 172 KGEFSKALDLPDEMIN 187
K E L +E +N
Sbjct: 493 KEEREDVLKFLNEKMN 508
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 2 MITASCKNNKAVILDPDERNLLSQ-------------VHSLLNVYQVDKAHNMLKYMIVR 48
+ITA CKN+ + + LS +HSL + V A +L MI +
Sbjct: 342 LITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISK 401
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G +P A +N ++H + EA +L+ M RGL PDV TY +I G+ + G + +A
Sbjct: 402 GPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEA 461
Query: 109 FEM--KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLM 166
E+ +AK HK + P TY LI C+ +A L EM R GV P+ Y +L+
Sbjct: 462 QEILAEAKKKHKKLSP--VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
Query: 167 NYYCFKG-EFSKALDLPDEMINKGFLPDGISPSLV 200
+C K ++ KA L +EM KG + IS L+
Sbjct: 520 QSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLI 554
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 33/251 (13%)
Query: 58 NELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVH 117
NELI + + + K A + + G +P+ TYY + C+ + A + KM+
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 118 KGILPDADTYGILILTLCRKGRLSKAFDLF-LEMLREGVSPHKYIYTRLMNYYCFKG--- 173
G+L + + G +I C++G+ +A+ ++ L +E P +++ T L+ C
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVAT-LITALCKNDGTI 353
Query: 174 EFSKAL--DLPDEMINKGFLP--------------------------DGISPSLVIYNAR 205
F++ + DL E +G P G +P ++N
Sbjct: 354 TFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLV 413
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
+H C G ++EA +L+ M GL PDV +YT +I G+ K G +A E+ E +K
Sbjct: 414 VHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHK 473
Query: 266 PLYEDIYQSLL 276
L Y +L+
Sbjct: 474 KLSPVTYHALI 484
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 63/265 (23%)
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
KE+ G+L +++ LI F + GK AF++ +K G P+A TY +
Sbjct: 223 KESCGVL----------NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLT 272
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKAL----------- 179
+ LC++ + A + +ML+ GV ++ ++C +G+ +A
Sbjct: 273 LEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEK 332
Query: 180 DLPDEMI---------NKGFLP---------------DGISPSLVIYNARIHGCCVLGRV 215
LP + N G + GI P ++ IH C + V
Sbjct: 333 SLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNV 388
Query: 216 EEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSL 275
++A +L M G +P + V+ K G+ +A E+ M+ +G L D+Y
Sbjct: 389 KDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRG--LKPDVY--- 443
Query: 276 LDDLSDEVTYSTLINDFHAQGNLMD 300
TY+ +I+ + A+G +MD
Sbjct: 444 --------TYTVIISGY-AKGGMMD 459
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 4/266 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD R +H + D A M+ M V F+P V TY + YC+ F+
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L +M + G +P+V TY ++ ++ ++ +A + KM G +PDA Y LI L
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ GR A ++F +M +GV +Y +++ AL L M ++ +
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE--GES 446
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGI-LRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
SP++ Y A + C + + LGI L M +S DV +Y +I+G C G+ +A
Sbjct: 447 CSPNVETY-APLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDL 279
E KG+ + + L+D+L
Sbjct: 506 CLFFEEAVRKGMVPRDSTCKMLVDEL 531
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 141/335 (42%), Gaps = 45/335 (13%)
Query: 125 DTYGILILTLCRKGRLSKAFDLFLEMLRE-GVSPHKYIYTRLMNYYCFKGEFSKALDLPD 183
DT ++ L + G+ +KA D FLEM + GV LM+ + A
Sbjct: 204 DTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHA----H 259
Query: 184 EMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
E+ K F D I P +N IHG C + ++A ++ M +PDVV+YT+ ++
Sbjct: 260 EVFLKLF--DTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEA 317
Query: 244 FCKIGEPVKAFELKLEMDEKG---------IPLYE-----------DIYQSLLDD--LSD 281
+CK G+ + E+ EM E G I ++ +Y+ + +D + D
Sbjct: 318 YCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPD 377
Query: 282 EVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLV 341
YS+LI+ G DA + +M+ D ++ + I+ + A R L
Sbjct: 378 AKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLK 437
Query: 342 RWFYQDCLSI-PAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNY 400
R ++ S P TY L++ C + + ++G++ L H M+ +
Sbjct: 438 RMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGIL-------LHH--------MVKNDV 482
Query: 401 KPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+ + Y LLI C G V +A ++E V G+
Sbjct: 483 SIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGM 517
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 165/355 (46%), Gaps = 32/355 (9%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V +A ++ MI G S SV ++ L+ G+ R+ ++AV + M + G SP++ TY
Sbjct: 228 VSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTS 287
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI GF G + +AF + +K+ +G+ PD ++I T R GR +A +F + +
Sbjct: 288 LIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRK 347
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCV--L 212
+ P +Y + +++ C G+F DL + + GI + + C +
Sbjct: 348 LVPDQYTFASILSSLCLSGKF----DLVPRITH------GIGTDFDLVTGNLLSNCFSKI 397
Query: 213 GRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL-KLEMDEKGIPLYEDI 271
G AL +L M+ + D +YT + C+ G P A ++ K+ + EK L
Sbjct: 398 GYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKK-HLDAHF 456
Query: 272 YQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVIS-SVRINGLNKK 330
+ +++D L + Y+T ++ F + +++ Y L DV+S +V I GL +
Sbjct: 457 HSAIIDSLIELGKYNTAVHLF--KRCILEKYPL------------DVVSYTVAIKGL-VR 501
Query: 331 ATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGL 384
A IE SL + + P RTY T+I C E + V ++++ G+
Sbjct: 502 AKRIEEAYSLCCDMKEGGI-YPNRRTYRTIISGLCKEKETEKVRKILRECIQEGV 555
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 188/445 (42%), Gaps = 52/445 (11%)
Query: 17 PDER--NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
P+ R N++ V+ LNV V+ A + + + R F +++ + +C + V
Sbjct: 141 PNTRAMNMMMDVNFKLNV--VNGALEIFEGIRFRNF----FSFDIALSHFCSRGGRGDLV 194
Query: 75 GI---LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILI 131
G+ L+ M G P+ + + ++ C+TG + +AF++ M+ GI + + +L+
Sbjct: 195 GVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLV 254
Query: 132 LTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL 191
R G KA DLF +M++ G SP+ YT L+ + G +A + ++ ++G
Sbjct: 255 SGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLA 314
Query: 192 PDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPV 251
PD +V+ N IH LGR EEA + + L PD ++ +++ C G+
Sbjct: 315 PD-----IVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGK-- 367
Query: 252 KAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEY 311
F+L +P I + D D VT + L N F G A + S MS
Sbjct: 368 --FDL--------VP---RITHGIGTDF-DLVTGNLLSNCFSKIGYNSYALKVLSIMSYK 413
Query: 312 SYLTDDVISSVRINGLNKKAT----------TIEAKRSLVRWFYQ----DCLSIPAYRTY 357
+ D +V ++ L + I+ K+ L F+ + + Y T
Sbjct: 414 DFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTA 473
Query: 358 DTLIENCSNNEFKTVVGLVKDFSMRGL--AHKAAKAHD---KMLHGNYKPEGAIYNLLIF 412
L + C ++ V + +++GL A + +A+ M G P Y +I
Sbjct: 474 VHLFKRCILEKYPLDV-VSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIIS 532
Query: 413 DHCRHGNVHKAYDMYKETVHSGVEI 437
C+ K + +E + GVE+
Sbjct: 533 GLCKEKETEKVRKILRECIQEGVEL 557
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P ++ ++ L++ D+ H + G N LI G C + + A+ +
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L + ++ P+V T+ PLI GFC GK +AF++ +M + I PD T+ ILI L +
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
KGR+ + DL M +G P+ Y ++ K +A ++ +MI+ G+
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW-----GMR 339
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIK 242
PS + Y + G C V E +LR M + G P + + V++
Sbjct: 340 PSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 10/231 (4%)
Query: 27 HSLLNVY-----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMA 81
++L+ +Y ++++A +L M G PS ++N +++ A F E I
Sbjct: 135 YNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAP 194
Query: 82 KRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLS 141
K G+ D LI G C++G L A ++ + + P+ T+ LI C KG+
Sbjct: 195 KLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFE 254
Query: 142 KAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
+AF L M +E + P + L++ KG + +DL + M K G P+
Sbjct: 255 EAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVK-----GCEPNPGT 309
Query: 202 YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVK 252
Y ++G R EA ++ M G+ P +SY ++ G C+ V+
Sbjct: 310 YQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVE 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 13/203 (6%)
Query: 67 ADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKL----GKAFEMKAKMVHKGILP 122
A R A+ IL M G P ++ I + KL K F K+ G+
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFN-FILNLLVSAKLFDEIHKIFVSAPKL---GVEI 200
Query: 123 DADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLP 182
DA ILI LC G L A L E ++ P+ ++ L+ +C KG+F +A L
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 183 DEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIK 242
+ M + PD I+ +N I G GRVEE + +L M G P+ +Y V+
Sbjct: 261 ERMEKERIEPDTIT-----FNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLY 315
Query: 243 GFCKIGEPVKAFELKLEMDEKGI 265
G ++A E+ +M G+
Sbjct: 316 GLLDKKRNLEAKEMMSQMISWGM 338
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 7/237 (2%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMA-KRGLSPDVDTYYPLICGFCQ-TGKL 105
+ + P+ + Y +I+ + +A + E ++R + ++ + +Y L+ + G++
Sbjct: 89 KDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRI 148
Query: 106 GKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRL 165
+A E+ M G P + ++ ++ L + +F+ + GV L
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 166 MNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM 225
+ C G AL L DE F P+++ ++ I G C G+ EEA +L M
Sbjct: 209 IKGLCESGNLEAALQLLDE-----FPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 226 ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDE 282
+ PD +++ +I G K G + +L M KG YQ +L L D+
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 54/108 (50%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++PD + L +V++ ++L+ M V+G P+ TY E+++G R EA
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILP 122
++ M G+ P +Y ++ G C+T + + + +MV+ G +P
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 20/289 (6%)
Query: 57 YNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMV 116
Y+ L+ + EA + DM + + D+Y ++ C GK +A EM +K+
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 117 HKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFS 176
KG++ D Y + L + ++S DLF +M ++G SP + Y L+ + GE
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD 494
Query: 177 KALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVS 236
+A+++ +E+ PD IS YN+ I+ G V+EA + M + GL+PDVV+
Sbjct: 495 EAINIFEELERSDCKPDIIS-----YNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVT 549
Query: 237 YTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQG 296
Y+ +++ F K A+ L EM KG + VTY+ L++ G
Sbjct: 550 YSTLMECFGKTERVEMAYSLFEEMLVKGCQ-------------PNIVTYNILLDCLEKNG 596
Query: 297 NLMDAYCLESEMSEYSYLTDDVISSV--RINGLNKKATTIEAKRSLVRW 343
+A L S+M + D + +V R+ ++ + I K + W
Sbjct: 597 RTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSRIRRKNPITGW 645
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
Q+ H++ + M G SP + TYN LI + R EA+ I ++ + PD+ +Y
Sbjct: 457 QISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYN 516
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI + G + +A +M KG+ PD TY L+ + R+ A+ LF EML +
Sbjct: 517 SLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVK 576
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G P+ Y L++ G ++A+DL +M +G PD I+
Sbjct: 577 GCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSIT 619
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 172/433 (39%), Gaps = 60/433 (13%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
DE + ++ + + D+A + MI G + +V YN L+ + +A+ +
Sbjct: 269 DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGK---AFEMKAKMVHKGILPDADTYGILILTL 134
M + G P+ TY L+ G+L + E+ + + +GI Y L+ TL
Sbjct: 329 SRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGI------YSYLVRTL 382
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ G +S+A LF +M V + Y ++ C G+ +A+++ ++ KG + D
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ +YN L ++ + M G SPD+ +Y +I F ++G
Sbjct: 443 M-----MYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG------ 491
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
E+DE I ++E++ +S D D ++Y++LIN G++ +A+ EM E L
Sbjct: 492 ----EVDE-AINIFEELERS--DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG-L 543
Query: 315 TDDVISSVRINGLNKKATTIEAKRSLV-RWFYQDCLSIPAYRTYDTLIENCSNNEFKTVV 373
DV++ + K +E SL + C P TY+ L++ N
Sbjct: 544 NPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQ--PNIVTYNILLDCLEKN------ 595
Query: 374 GLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHS 433
G +A + KM P+ Y +L + + H
Sbjct: 596 ---------GRTAEAVDLYSKMKQQGLTPDSITYTVL--------------ERLQSVSHG 632
Query: 434 GVEIGRAEPSFTW 446
I R P W
Sbjct: 633 KSRIRRKNPITGW 645
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 180/428 (42%), Gaps = 63/428 (14%)
Query: 44 YMIVRGFSPSVATYNELIHGYCRADRF------------KEAVGILRDMAKRGLSPDVDT 91
Y+ R +S + Y E+ G + D F ++A + DM KR D T
Sbjct: 213 YLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYT 272
Query: 92 YYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML 151
Y +I + GK +A + +M+ +G+ + Y L+ L + + KA +F M+
Sbjct: 273 YTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMV 332
Query: 152 REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCV 211
G P++Y Y+ L+N +G+ + LD E I+K ++ G IY+ +
Sbjct: 333 ETGCRPNEYTYSLLLNLLVAEGQLVR-LDGVVE-ISKRYMTQG------IYSYLVRTLSK 384
Query: 212 LGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIP----L 267
LG V EA + M + + SY ++++ C G+ ++A E+ ++ EKG+ +
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 268 YEDIYQSL--------LDDL----------SDEVTYSTLINDFHAQGNLMDAYCLESEMS 309
Y ++ +L + DL D TY+ LI F G + +A + E+
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL- 503
Query: 310 EYSYLTDDVIS-SVRINGLNKKATTIEAKRSLVRWF-YQDCLSIPAYRTYDTLIENCSNN 367
E S D+IS + IN L K EA VR+ Q+ P TY TL+E C
Sbjct: 504 ERSDCKPDIISYNSLINCLGKNGDVDEAH---VRFKEMQEKGLNPDVVTYSTLME-C--- 556
Query: 368 EFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMY 427
F A ++ML +P YN+L+ ++G +A D+Y
Sbjct: 557 -----------FGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLY 605
Query: 428 KETVHSGV 435
+ G+
Sbjct: 606 SKMKQQGL 613
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 172/406 (42%), Gaps = 64/406 (15%)
Query: 57 YNELIHGYCRA---DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKA 113
YN +I R+ DRF IL M K + ++ T LI F T L +M
Sbjct: 136 YNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDL----QMCL 191
Query: 114 KMVHKGILP-DADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
++V K L ++ TY L+ R SKAFD++ E+ R G + Y L++
Sbjct: 192 RLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL--- 248
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
+ KA + ++M + D + +++I R G +G+ +EA+G+ M GL+
Sbjct: 249 AKDEKACQVFEDMKKRHCRRDEYTYTIMI---RTMG--RIGKCDEAVGLFNEMITEGLTL 303
Query: 233 DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDF 292
+VV Y +++ K KA ++ M E G +E TYS L+N
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCR-------------PNEYTYSLLLNLL 350
Query: 293 HAQGNL--MDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLS 350
A+G L +D E+S+ Y+T + S + + L+K EA R + D S
Sbjct: 351 VAEGQLVRLDGVV---EISK-RYMTQGIYSYL-VRTLSKLGHVSEAHR-----LFCDMWS 400
Query: 351 IPA---YRTYDTLIEN-CSNNEFKTVV---------GLVKD-------FSMRGLAHKAAK 390
P +Y +++E+ C + + G+V D FS G + +
Sbjct: 401 FPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISH 460
Query: 391 AHD---KMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHS 433
HD KM P+ YN+LI R G V +A ++++E S
Sbjct: 461 IHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERS 506
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + S ++ L VD+AH K M +G +P V TY+ L+ + + +R + A +
Sbjct: 510 PDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSL 569
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
+M +G P++ TY L+ + G+ +A ++ +KM +G+ PD+ TY +L
Sbjct: 570 FEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Query: 41 MLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFC 100
ML++ I P+ TYN +I G+C+ DR +A +L MA +G SPDV T+ LI G+C
Sbjct: 1 MLRWSIF----PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYC 56
Query: 101 QTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKY 160
+ ++ E+ +M +GI+ + TY LI C+ G L A DL EM+ GV+P
Sbjct: 57 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYI 116
Query: 161 IYTRLMNYYCFKGEFSKALDLPDEM 185
+ ++ C K E KA + +++
Sbjct: 117 TFHCMLAGLCSKKELRKAFAILEDL 141
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+VD A ML M +G SP V T++ LI+GYC+A R + I +M +RG+ + TY
Sbjct: 25 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 84
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI GFCQ G L A ++ +M+ G+ PD T+ ++ LC K L KAF + LE L++
Sbjct: 85 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI-LEDLQK 143
Query: 154 GVSPH 158
H
Sbjct: 144 SEDHH 148
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 80 MAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
M + + P TY +I GFC+ ++ A M M KG PD T+ LI C+ R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
+ ++F EM R G+ + YT L++ +C G+ A DL +EMI+ G PD I+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT--- 117
Query: 200 VIYNARIHGCCVLGRVEEALGILRGM 225
++ + G C + +A IL +
Sbjct: 118 --FHCMLAGLCSKKELRKAFAILEDL 141
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
I P+ + YN+ I G C RV++A +L MA G SPDVV+++ +I G+CK
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
E+ EM +GI +++ VTY+TLI+ F G+L A L +EM
Sbjct: 65 MEIFCEMHRRGI-------------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 111
Query: 314 LTDDVISSVRINGLNKK 330
D + + GL K
Sbjct: 112 APDYITFHCMLAGLCSK 128
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 150 MLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGC 209
MLR + P Y +++ +C + A + D M +KG SP +V ++ I+G
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG-----CSPDVVTFSTLINGY 55
Query: 210 CVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIP 266
C RV+ + I M G+ + V+YT +I GFC++G+ A +L EM G+
Sbjct: 56 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + ++ +VD + M RG + TY LIHG+C+ A +
Sbjct: 43 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 102
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
L +M G++PD T++ ++ G C +L KAF +
Sbjct: 103 LNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 137
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 8/254 (3%)
Query: 14 ILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIV---RGFSPSVATYNELIHGYCRADRF 70
+ PD R + + + +V ML+ M R P TY ++ + A
Sbjct: 409 VFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLM 468
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVH-KGILPDADTYGI 129
A +L +MA+ G+ + TY L+ G+C+ ++ +A ++ +M GI PD +Y I
Sbjct: 469 DRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNI 528
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
+I + A F EM G++P K YT LM + G+ A + DEM+N
Sbjct: 529 IIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMND- 587
Query: 190 FLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
+ L+ +N + G C LG +E+A ++ M + G P+V +Y ++ G + +
Sbjct: 588 ---PRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Query: 250 PVKAFELKLEMDEK 263
P A L E+ E+
Sbjct: 645 PGDALLLWKEIKER 658
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 25/251 (9%)
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVH---KGILPDADTYGILILTLCRKGRLS 141
+PD Y L+ G+ + G++ M M + PD TY ++ G +
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 142 KAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
+A + EM R GV ++ Y L+ YC + + +A DL EM GI P +V
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDA----GIEPDVVS 525
Query: 202 YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMD 261
YN I GC ++ AL M G++P +SYT ++K F G+P
Sbjct: 526 YNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQP----------- 574
Query: 262 EKGIPLYEDIYQSLLDDLS---DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDV 318
L ++ +++D D + ++ L+ + G + DA + S M E + +
Sbjct: 575 ----KLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVA 630
Query: 319 ISSVRINGLNK 329
NG+++
Sbjct: 631 TYGSLANGVSQ 641
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 169/439 (38%), Gaps = 69/439 (15%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + +++ N+ DK + + M P V TYN +I R R + V +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L + +G+ + T + L+ + G L A + M K LC+
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKR------------RDLCK 341
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSK--ALD-----LPDEMINKG 189
R A DL + E + Y + E S+ +D LP+ + G
Sbjct: 342 VLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSG 401
Query: 190 ---FLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA---DMGLSPDVVSYTNVIKG 243
LP +P IY + G GRV + +L M D PD V+YT V+
Sbjct: 402 EPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSA 461
Query: 244 FCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYC 303
F G +A ++ EM G+P ++ +TY+ L+ + Q + A
Sbjct: 462 FVNAGLMDRARQVLAEMARMGVP-------------ANRITYNVLLKGYCKQLQIDRAED 508
Query: 304 LESEMSEYSYLTDDVIS-SVRING---LNKKATTIEAKRSLVRWFYQDCLS---IPAYRT 356
L EM+E + + DV+S ++ I+G ++ A + F+ + + P +
Sbjct: 509 LLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALA--------FFNEMRTRGIAPTKIS 560
Query: 357 YDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHG-NYKPEGAIYNLLIFDHC 415
Y TL+ K F+M G A + D+M++ K + +N+L+ +C
Sbjct: 561 YTTLM---------------KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYC 605
Query: 416 RHGNVHKAYDMYKETVHSG 434
R G + A + +G
Sbjct: 606 RLGLIEDAQRVVSRMKENG 624
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 157/401 (39%), Gaps = 37/401 (9%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
+KA ++ K M +G P TYN L D EA IL +M G P TY +
Sbjct: 532 EKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAM 591
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
I + + G L A ++ M G+ P+ YG LI G + +A F M GV
Sbjct: 592 IASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRV 215
+ + T L+ Y G +A + D+M + PD + N+ + C LG V
Sbjct: 652 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD-----VAASNSMLSLCADLGIV 706
Query: 216 EEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSL 275
EA I + + G + DV+S+ ++ + +G +A E+ EM E G+
Sbjct: 707 SEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGL---------- 755
Query: 276 LDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIE 335
LSD +++ ++ + A G L + L EM L D + + L KK
Sbjct: 756 ---LSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPS 812
Query: 336 AKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKM 395
S ++ Y + + TL FS GL A ++ ++
Sbjct: 813 EAVSQLQTAYNEAKPLATPAITATL------------------FSAMGLYAYALESCQEL 854
Query: 396 LHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
G E YN +I+ + G++ A Y G+E
Sbjct: 855 TSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLE 895
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 175/446 (39%), Gaps = 50/446 (11%)
Query: 17 PDERNLLSQVHSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKE 72
P + L S ++L+++Y +++ A N+ M+ G T+N +IH E
Sbjct: 299 PRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSE 358
Query: 73 AVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILIL 132
A +L+ M ++G+SPD TY L+ G + A E K+ G+ PD T+ ++
Sbjct: 359 AESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLH 418
Query: 133 TLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLP 192
LC++ +++ + EM R + ++ +M Y +G +A L + F
Sbjct: 419 ILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFER-----FQL 473
Query: 193 DGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM-GLSPDVVSYTNVIKGFCKIGEPV 251
D + S + A I G EA + G +M G DV+ Y +IK + K
Sbjct: 474 DCVLSSTTL-AAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHE 532
Query: 252 KAFELKLEMDEKGIPLYEDIYQSLLD-----DLSDEV-----------------TYSTLI 289
KA L M +G E Y SL DL DE TY+ +I
Sbjct: 533 KALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 290 NDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCL 349
+ G L DA L M + ++V+ ING + EA
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEA------------- 639
Query: 350 SIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNL 409
I +R + E+ + + L+K +S G +A + +DKM P+ A N
Sbjct: 640 -IQYFRMME---EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNS 695
Query: 410 LIFDHCRHGNVHKAYDMYKETVHSGV 435
++ G V +A ++ G
Sbjct: 696 MLSLCADLGIVSEAESIFNALREKGT 721
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 135/328 (41%), Gaps = 20/328 (6%)
Query: 9 NNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRAD 68
+NKA++ PD +L ++ L+ +VD A +L ++ G P YN +I G C+
Sbjct: 431 HNKAIL--PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEG 488
Query: 69 RFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYG 128
R +E++ +L +M G+ P T + + A ++ KM G P
Sbjct: 489 RSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTT 548
Query: 129 ILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINK 188
L+ LC GR A ++ EG H T ++ + L+L ++
Sbjct: 549 FLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICAN 608
Query: 189 GFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
G PD I+ Y+ I C R EA + M GL P V +Y ++I G+CK G
Sbjct: 609 GHCPDVIA-----YHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEG 663
Query: 249 EPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
E + + M YED + D +TY++LI+ A G +A +EM
Sbjct: 664 EIDRGLSCIVRM-------YED------EKNPDVITYTSLIHGLCASGRPSEAIFRWNEM 710
Query: 309 SEYSYLTDDVISSVRINGLNKKATTIEA 336
+ + I GL K + EA
Sbjct: 711 KGKDCYPNRITFMALIQGLCKCGWSGEA 738
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 5/226 (2%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A ++LK M GF P + L+ C R +A L D+A G + I
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
G + + + E+ + G PD Y +LI LC+ R +A LF EM+ +G+ P
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
Y +++ +C +GE + L M D +P ++ Y + IHG C GR E
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYE-----DEKNPDVITYTSLIHGLCASGRPSE 702
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
A+ M P+ +++ +I+G CK G +A EM+EK
Sbjct: 703 AIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEK 748
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 5/209 (2%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
+ + L+ VD+ + + + G P V Y+ LI C+A R EA + +M +
Sbjct: 584 AAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK 643
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
GL P V TY +I G+C+ G++ + +M PD TY LI LC GR S+A
Sbjct: 644 GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA 703
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
+ EM + P++ + L+ C G +AL EM K PD +Y
Sbjct: 704 IFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDS-----AVYL 758
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSP 232
+ + + GI R M G P
Sbjct: 759 SLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 177/457 (38%), Gaps = 78/457 (17%)
Query: 19 ERNLLSQVHSLLNVYQVDKAHNMLKYM-IVRGFSPSVATYNELIH----------GYCRA 67
E + LS++ ++ + +DK ML Y + GF N+L+H G +
Sbjct: 365 EESELSRITEVI-IGDIDKKSVMLLYKSLFEGF-----IRNDLVHEAYSFIQNLMGNYES 418
Query: 68 DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTY 127
D E V +L+D K + PD D+ +I + K+ A + +V G++P Y
Sbjct: 419 DGVSEIVKLLKDHNK-AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMY 477
Query: 128 GILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
+I +C++GR ++ L EM GV P ++ + + +F ALDL +M
Sbjct: 478 NNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRF 537
Query: 188 KGFLP------------------------------DGISPSLVIYNARIHGCCVLGRVEE 217
GF P +G +V A I G V+
Sbjct: 538 YGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDR 597
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
L + R + G PDV++Y +IK CK ++A L EM KG+
Sbjct: 598 GLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLK----------- 646
Query: 278 DLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAK 337
TY+++I+ + +G + M E D + + I+GL EA
Sbjct: 647 --PTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA- 703
Query: 338 RSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLH 397
+ RW + ++C N T + L++ G + +A +M
Sbjct: 704 --IFRW-------------NEMKGKDCYPNRI-TFMALIQGLCKCGWSGEALVYFREMEE 747
Query: 398 GNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
+P+ A+Y L+ N++ + +++E VH G
Sbjct: 748 KEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 16/253 (6%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GF + I G + + + + RD+ G PDV Y+ LI C+ + +A
Sbjct: 574 GFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEA 633
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ +MV KG+ P TY +I C++G + + + M + +P YT L++
Sbjct: 634 DILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHG 693
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
C G S+A+ +EM K P+ I+ + A I G C G EAL R M +
Sbjct: 694 LCASGRPSEAIFRWNEMKGKDCYPNRIT-----FMALIQGLCKCGWSGEALVYFREMEEK 748
Query: 229 GLSPDVVSYT----------NVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDD 278
+ PD Y N+ GF E V + +D + L ++ ++D
Sbjct: 749 EMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVD-RNYMLAVNVTSKFVED 807
Query: 279 LSDEVTYSTLIND 291
L + LI D
Sbjct: 808 LRTSCYLTCLIKD 820
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 106/523 (20%), Positives = 192/523 (36%), Gaps = 122/523 (23%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGF-SPSVATYNELIHGYCRADRFKEAVGI 76
D+ L + N + ++A ++ ++ RG+ ++T L+ +C+ + +A +
Sbjct: 213 DKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTI--LVVSFCKWGQVDKAFEL 270
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
+ + +R + + TY LI GF + ++ KAF++ KM G+ D Y +LI LC+
Sbjct: 271 IEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCK 330
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINK-------- 188
L A L+LE+ R G+ P + I +L+ + + E S+ ++ I+K
Sbjct: 331 HKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYK 390
Query: 189 ----GF---------------------------------------LPDGISPSLVIYNAR 205
GF LPD S S+VI
Sbjct: 391 SLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVI---- 446
Query: 206 IHGCCV-LGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
C V +V+ A+ +L + GL P + Y N+I+G CK G ++ +L EM + G
Sbjct: 447 --NCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAG 504
Query: 265 IPLYEDIYQSLLDDLSDEVTY----------------------STLINDFHAQGNLMDAY 302
+ + + L++ + + L+ G +DA
Sbjct: 505 VEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDAC 564
Query: 303 CLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIE 362
+++ +L V S+ I+GL K R + +
Sbjct: 565 KYLDDVAGEGFLGHMVASTAAIDGLIKNEGV--------------------DRGLELFRD 604
Query: 363 NCSNNEFKTVVG---LVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGN 419
C+N V+ L+K +A ++M+ KP A YN +I C+ G
Sbjct: 605 ICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGE 664
Query: 420 VHKAYD---------------MYKETVHSGVEIGR-AEPSFTW 446
+ + Y +H GR +E F W
Sbjct: 665 IDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 146/368 (39%), Gaps = 87/368 (23%)
Query: 121 LPDADTYGILILTLCRKGRLSKAFDLFLEMLRE----GVSPHKYIYTRLMNYYCFKGEFS 176
+P+A TY L+ + + S + +L L+E G K+ T ++ YC G+
Sbjct: 174 VPNAYTYNCLLEAISKSN--SSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSE 231
Query: 177 KALDLPDEMINKGFLPDGISPSLVI-----------------------------YNARIH 207
+AL + +E++++G+L + IS LV+ Y IH
Sbjct: 232 RALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIH 291
Query: 208 GCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPL 267
G R+++A + M MG++ D+ Y +I G CK + A L LE+ GIP
Sbjct: 292 GFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351
Query: 268 YEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGL 327
I LL C SE SE S +T+ +I +
Sbjct: 352 DRGILGKLL--------------------------CSFSEESELSRITEVIIGDI----- 380
Query: 328 NKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGL--- 384
+KK+ + K SL F ++ L AY L+ N ++ +V L+KD + L
Sbjct: 381 DKKSVMLLYK-SLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDS 439
Query: 385 ------------AHKAAKA----HDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYK 428
A+K A HD + +G P +YN +I C+ G ++ +
Sbjct: 440 DSLSIVINCLVKANKVDMAVTLLHDIVQNG-LIPGPMMYNNIIEGMCKEGRSEESLKLLG 498
Query: 429 ETVHSGVE 436
E +GVE
Sbjct: 499 EMKDAGVE 506
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
Query: 21 NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM 80
N L + S N V+ LK M GF T ++ YC + + A+ + ++
Sbjct: 181 NCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEI 240
Query: 81 AKRG-LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
RG L + T L+ FC+ G++ KAFE+ + + I + TY +LI ++ R
Sbjct: 241 LSRGWLDEHISTI--LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESR 298
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
+ KAF LF +M R G++ +Y L+ C + AL L E+ G PD
Sbjct: 299 IDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPD 352
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 5/242 (2%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A + ++ M+ G +P +YN +I + + ++ ++ + + PDVDTY ++
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
C+ AF + M G+ P Y +I +L ++GR+ +A + F +ML G+ P
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP 615
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+ Y ++N Y G +A +L +E++ K FL PS Y I G +G +E+
Sbjct: 616 DEIAYMIMINTYARNGRIDEANELVEEVV-KHFL----RPSSFTYTVLISGFVKMGMMEK 670
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
L M + GLSP+VV YT +I F K G+ +F L M E I Y +LL
Sbjct: 671 GCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLS 730
Query: 278 DL 279
L
Sbjct: 731 GL 732
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 19/227 (8%)
Query: 19 ERNLLSQVHSLLNVYQ-VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
+ N++ + SL+N+ Q +D F P V TY +++ C+ + A I+
Sbjct: 524 QENIIEDLASLVNIIQELD-------------FVPDVDTYLIVVNELCKKNDRDAAFAII 570
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
M + GL P V Y +I + G++ +A E AKM+ GI PD Y I+I T R
Sbjct: 571 DAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARN 630
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
GR+ +A +L E+++ + P + YT L++ + G K D+M L DG+SP
Sbjct: 631 GRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKM-----LEDGLSP 685
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGF 244
++V+Y A I G + + + M + + D ++Y ++ G
Sbjct: 686 NVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 136/314 (43%), Gaps = 18/314 (5%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD L S V L+ + + D+A L +I G++PS + + ++ C DRF EA
Sbjct: 129 PDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHC 188
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILP-DADTYGILILTLC 135
+ +RG + L G C G L +A M + +P + Y L C
Sbjct: 189 FEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFC 248
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
++G ++A LF M +G K +YT LM YC + A+ L M+ + F D
Sbjct: 249 KRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDP- 307
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
I+N IHG LG +++ + M G+ +V +Y +I +CK G +
Sbjct: 308 ----CIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNV--DYA 361
Query: 256 LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLT 315
L+L ++ G EDI +++ Y+ LI F+ +G + A L M + +
Sbjct: 362 LRLFVNNTG---SEDISRNVH-------CYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVP 411
Query: 316 DDVISSVRINGLNK 329
D + V + L K
Sbjct: 412 DHITYFVLLKMLPK 425
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 127/302 (42%), Gaps = 45/302 (14%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PDE + +++ ++D+A+ +++ ++ PS TY LI G+ + ++
Sbjct: 613 IQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGC 672
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
L M + GLSP+V Y LI F + G +F + M I D Y L+ L
Sbjct: 673 QYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Query: 135 CR---------------KGRL---------------------SKAFDL-FLEMLREGVSP 157
R K +L SK+F + + +++ + P
Sbjct: 733 WRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIP 792
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+ Y++ ++ YC G +A + + M +GI P+LV Y + G +E
Sbjct: 793 NLYLHNTIITGYCAAGRLDEAYNHLESM-----QKEGIVPNLVTYTILMKSHIEAGDIES 847
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
A+ + G PD V Y+ ++KG C P+ A L LEM + GI +D Y+ LL
Sbjct: 848 AIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQ 904
Query: 278 DL 279
L
Sbjct: 905 CL 906
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 183/456 (40%), Gaps = 65/456 (14%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
+A + +M V G+ Y L+ YC+ + A+ + M +R D + LI
Sbjct: 255 EAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLI 314
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML-REGV 155
GF + G L K M ++M+ KG+ + TY I+I + C++G + A LF+ E +
Sbjct: 315 HGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDI 374
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS--------P-------SLV 200
S + + YT L+ + KG KA+DL M++ G +PD I+ P ++V
Sbjct: 375 SRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMV 434
Query: 201 IYNARI-HGCCV-------LGRVEEALGILRG--------MADMGL---SPDVVSYTNVI 241
I + + +GC + LG +E + L G +A +GL + + S N I
Sbjct: 435 ILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYI 494
Query: 242 KGFCKIGEPVKAFELKLEMDEKGIP---LYEDIYQSL---------LDDLSDEVTYSTLI 289
+I + V L + E+I + L LD + D TY ++
Sbjct: 495 AALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVV 554
Query: 290 NDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQ--- 346
N+ + + A+ + M E I S I L K+ +EA+ + +
Sbjct: 555 NELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQ 614
Query: 347 --DCLSIPAYRTY---------DTLIENCSNNEFK----TVVGLVKDFSMRGLAHKAAKA 391
+ + TY + L+E + + T L+ F G+ K +
Sbjct: 615 PDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQY 674
Query: 392 HDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMY 427
DKML P +Y LI + G+ ++ ++
Sbjct: 675 LDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLF 710
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD L V+ L D A ++ M G P+VA Y+ +I + R EA
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
M + G+ PD Y +I + + G++ +A E+ ++V + P + TY +LI +
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDL 181
G + K +ML +G+SP+ +YT L+ ++ KG+F + L
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTL 709
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 8 KNNKAVILDPDERNLLSQ---------VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYN 58
K + VI++P + LL + + S L Y + + + P++ +N
Sbjct: 739 KKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHN 798
Query: 59 ELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK 118
+I GYC A R EA L M K G+ P++ TY L+ + G + A ++
Sbjct: 799 TIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL---FEGT 855
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
PD Y L+ LC R A L LEM + G++P+K Y +L+ C+ +A
Sbjct: 856 NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEA 915
Query: 179 LDLPDEMINKGFLPDGISPSLVIY 202
+ + +M P I+ + +IY
Sbjct: 916 VKVVKDMAALDIWPRSINHTWLIY 939
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 166/417 (39%), Gaps = 48/417 (11%)
Query: 54 VATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKA 113
V Y L + +C+ EA + M G D Y L+ +C+ + A +
Sbjct: 237 VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYL 296
Query: 114 KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKG 173
+MV + D + LI + G L K +F +M+++GV + + Y ++ YC +G
Sbjct: 297 RMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEG 356
Query: 174 EFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPD 233
AL L +N D IS ++ Y I G G +++A+ +L M D G+ PD
Sbjct: 357 NVDYALRL---FVNNTGSED-ISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPD 412
Query: 234 VVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD-EVTYSTLINDF 292
++Y ++K K E A + + + G I ++DDL + EV +L+ +
Sbjct: 413 HITYFVLLKMLPKCHELKYAMVILQSILDNGC----GINPPVIDDLGNIEVKVESLLGEI 468
Query: 293 HAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATT------------------I 334
+ + A L + + + + RI + T I
Sbjct: 469 ARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENII 528
Query: 335 EAKRSLVRWFYQDCLSIPAYRTYDTLI-ENCSNNEFKTVVGLV---KDFSMR-------- 382
E SLV Q+ +P TY ++ E C N+ ++ ++ +R
Sbjct: 529 EDLASLVN-IIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSS 587
Query: 383 --------GLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETV 431
G +A + KML +P+ Y ++I + R+G + +A ++ +E V
Sbjct: 588 IIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVV 644
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 105/268 (39%), Gaps = 45/268 (16%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L P + + + ++K L M+ G SP+V Y LI + + FK +
Sbjct: 648 LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSF 707
Query: 75 GILRDMAKRGLSPDVDTYYPLICGF-------------CQTGK----------------- 104
+ M + + D Y L+ G + GK
Sbjct: 708 TLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIP 767
Query: 105 --LG----KAFEMKA-KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
LG K+F M+ V K I+P+ + +I C GRL +A++ M +EG+ P
Sbjct: 768 SSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVP 827
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+ YT LM + G+ A+DL F P V+Y+ + G C R +
Sbjct: 828 NLVTYTILMKSHIEAGDIESAIDL--------FEGTNCEPDQVMYSTLLKGLCDFKRPLD 879
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFC 245
AL ++ M G++P+ SY +++ C
Sbjct: 880 ALALMLEMQKSGINPNKDSYEKLLQCLC 907
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 89/225 (39%), Gaps = 17/225 (7%)
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
G+ PD ++ + + +A +++ G P ++ +++ LC + R +A
Sbjct: 126 GIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEA 185
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
F F ++ G + RL C G ++A+ + D + +P ++ +Y
Sbjct: 186 FHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVN----LYK 241
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
+ + C G EA + M G D V YT ++K +CK A L L M E+
Sbjct: 242 SLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVER 301
Query: 264 GIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
L D ++TLI+ F G L + S+M
Sbjct: 302 SFEL-------------DPCIFNTLIHGFMKLGMLDKGRVMFSQM 333
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 115/298 (38%), Gaps = 30/298 (10%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLS---PDVDT 91
+DKA ++L M+ G P TY L+ + K A+ IL+ + G P +D
Sbjct: 394 MDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDD 453
Query: 92 YYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML 151
+ LG+ A + G+ ++ LC + A +M+
Sbjct: 454 LGNIEVKV--ESLLGEIARKDANLAAVGL-------AVVTTALCSQRNYIAALSRIEKMV 504
Query: 152 REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCV 211
G +P + Y ++ + L + + F+PD + L++ N C
Sbjct: 505 NLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPD-VDTYLIVVNE----LCK 559
Query: 212 LGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDI 271
+ A I+ M ++GL P V Y+++I K G V+A E +M E GI
Sbjct: 560 KNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQ----- 614
Query: 272 YQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNK 329
DE+ Y +IN + G + +A L E+ ++ +V I+G K
Sbjct: 615 --------PDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P Y+ L+ G C R +A+ ++ +M K G++P+ D+Y L+ C + +A ++
Sbjct: 859 PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKV 918
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
M I P + + LI LC + +L +A LF M++ G S
Sbjct: 919 VKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRS 963
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 104/250 (41%), Gaps = 24/250 (9%)
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEM-KAKMVHKGILPDADTYGILILTLCRKGRLSK 142
G+ D Y LI + G+ G A +++ GI+PD+ ++ L + R +
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIY 202
A ++ G +P + + +++ C + F +A +++ +G L ++
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERG-------SGLWLW 202
Query: 203 NAR--IHGCCVLGRVEEALGILRGMADMGLSPDVVS-YTNVIKGFCKIGEPVKAFELKLE 259
+ G C G + EA+G+L + M P V+ Y ++ FCK G +A L
Sbjct: 203 CCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDH 262
Query: 260 MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
M+ G + D+V Y+ L+ ++ N+ A L M E S+ D I
Sbjct: 263 MEVDGYYV-------------DKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCI 309
Query: 320 SSVRINGLNK 329
+ I+G K
Sbjct: 310 FNTLIHGFMK 319
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 5/222 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++ +A + + M P+V TY LI GYCR R + A+ +L +M + + +
Sbjct: 265 KLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFN 324
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
P+I G + G+L +A M + P TY L+ C+ G L A + M+
Sbjct: 325 PIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTR 384
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
GV P Y Y+ + + ++L ++I G PD ++ Y+ + C G
Sbjct: 385 GVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT-----YHLILKMLCEDG 439
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
++ A+ + + M + G+ PD+++ T +I C++ +AFE
Sbjct: 440 KLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE 481
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 7/215 (3%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
PSV +N L++G+ R+ + K+A + +M + P V TY LI G+C+ ++ A E+
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
+M + + + +I L GRLS+A + P Y L+ +C
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFC- 366
Query: 172 KGEFSKALDLPD-EMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
KA DLP I K + G+ P+ YN + EE + + + + G
Sbjct: 367 -----KAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH 421
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
SPD ++Y ++K C+ G+ A ++ EM +GI
Sbjct: 422 SPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++ +A M++ V P++ TYN L+ +C+A A IL+ M RG+ P TY
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
F + K + + K++ G PD TY +++ LC G+LS A + EM
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ P T L++ C +A + D + +G +P I+ ++ R G +
Sbjct: 455 GIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMA 514
Query: 214 R 214
+
Sbjct: 515 K 515
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/452 (19%), Positives = 174/452 (38%), Gaps = 69/452 (15%)
Query: 23 LSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM-- 80
LS + +LL V ++ + G PSV EL+H DR + +L +
Sbjct: 70 LSTISNLLENTDVVPGSSLESALDETGIEPSV----ELVHALF--DRLSSSPMLLHSVFK 123
Query: 81 ---AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPD-------ADTYGIL 130
K G + + ++ C+ + FE+ +V + D ADT+ +L
Sbjct: 124 WAEMKPGFTLSPSLFDSVVNSLCK----AREFEIAWSLVFDRVRSDEGSNLVSADTFIVL 179
Query: 131 ILTLCRKGRLSKAFDLFLEMLRE-----GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEM 185
I R G + +A F E R + + L++ C +G +A + E
Sbjct: 180 IRRYARAGMVQQAIRAF-EFARSYEPVCKSATELRLLEVLLDALCKEGHVREA-SMYLER 237
Query: 186 INKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFC 245
I G + PS+ I+N ++G ++++A + M M + P VV+Y +I+G+C
Sbjct: 238 IG-GTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYC 296
Query: 246 KIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDE----------------------V 283
++ A E+ EM + + ++ ++D L + V
Sbjct: 297 RMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIV 356
Query: 284 TYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRW 343
TY++L+ +F G+L A ++ + G++ TT ++
Sbjct: 357 TYNSLVKNFCKAGDLPGA--------------SKILKMMMTRGVDPTTTTYN---HFFKY 399
Query: 344 FYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPE 403
F + + Y LIE + + T ++K G A + + +M + P+
Sbjct: 400 FSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPD 459
Query: 404 GAIYNLLIFDHCRHGNVHKAYDMYKETVHSGV 435
+LI CR + +A++ + V G+
Sbjct: 460 LLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGI 491
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 176/454 (38%), Gaps = 72/454 (15%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
++PSV YN ++ RA +F A G+ +M +R L+PD TY LI F + G A
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
KM + D Y LI R SKA +F + R G++P Y ++N Y
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 270
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPS--LVIY------------------------- 202
F +A L EM G LP+ +S S L +Y
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 330
Query: 203 ---NARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCK---IGEPVKAFEL 256
N I L V+EA + + M + P+VVSY +++ + + GE + F L
Sbjct: 331 TTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRL 390
Query: 257 KLEMD-EKGIPLYEDIYQ------------SLLDDLS------DEVTYSTLINDFHAQGN 297
D E+ + Y + + +L+ ++ + +TYST+I+ + G
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 450
Query: 298 LMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTY 357
L A L ++ D V+ I + AKR L D +IP T
Sbjct: 451 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPD--NIPR-ETA 507
Query: 358 DTLIENCSNNEFKTVV-------GLVKDFSMRG----LAHKAAK------AHDKMLHGNY 400
T++ E T V G VKD S+ G L + + +KM Y
Sbjct: 508 ITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGY 567
Query: 401 KPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
P+ + +++ + + KA +Y+E G
Sbjct: 568 FPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 13/251 (5%)
Query: 15 LDPDERNLLSQVHSLLN-VYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEA 73
LD N++ V+ L+ V + D+ L+ M + P+V +YN ++ Y A+ F EA
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI---EPNVVSYNTILRVYGEAELFGEA 384
Query: 74 VGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
+ + R M ++ + +V TY +I + +T + KA + +M +GI P+A TY +I
Sbjct: 385 IHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISI 444
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
+ G+L +A LF ++ GV + +Y ++ Y G A L E+ LPD
Sbjct: 445 WGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPD 500
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
I I GR EEA + R + G D+ + +I + + V
Sbjct: 501 NIPRETA-----ITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNV 555
Query: 254 FELKLEMDEKG 264
E+ +M G
Sbjct: 556 IEVFEKMRTAG 566
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 185/469 (39%), Gaps = 91/469 (19%)
Query: 37 KAHNMLKYMIVRGFSPSVATY-----------------------------------NELI 61
+A + K + G PS+ +Y N +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 62 HGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG-- 119
+ + + ++AV L M + GL+P TY LI G+ GK ++ E+ M+ +G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 120 -ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
+ P+ T+ +L+ C+K ++ +A+++ +M GV P Y + Y KGE +A
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYT 238
E++ K + + P+ + G C GRV + L +R M +M + ++V +
Sbjct: 243 ---ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 239 NVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL---SDEVTYSTLINDFHAQ 295
++I GF ++ MD GI D +L+ + +D +TYST++N + +
Sbjct: 300 SLINGFVEV------------MDRDGI----DEVLTLMKECNVKADVITYSTVMNAWSSA 343
Query: 296 GNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYR 355
G + A + EM + D S+ G + +A+ L + S P
Sbjct: 344 GYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE---SRPNVV 400
Query: 356 TYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDH 414
+ T+I CSN G A + +KM P + L++ +
Sbjct: 401 IFTTVISGWCSN----------------GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 444
Query: 415 CRHGNVHKAYDMYKETVHSGVEIGRAEPSFTWPRPGLHFFFVAQAWPVA 463
KA ++ + GV + E S F +A+AW VA
Sbjct: 445 LEVKQPWKAEEVLQMMRGCGV---KPENS--------TFLLLAEAWRVA 482
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 132/328 (40%), Gaps = 37/328 (11%)
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
L+ L +GR +A +F + G P YT L+ + ++ + E+ G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 190 FLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
D I +NA I+ G +E+A+ L M ++GL+P +Y +IKG+ G+
Sbjct: 111 TKLDSI-----FFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGK 165
Query: 250 PVKAFE-LKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
P ++ E L L ++E + + +I T++ L+ + + + +A+ + +M
Sbjct: 166 PERSSELLDLMLEEGNVDVGPNIR-----------TFNVLVQAWCKKKKVEEAWEVVKKM 214
Query: 309 SEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNN 367
E D V + +K T+ A+ +V + P RT ++ C
Sbjct: 215 EECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREG 274
Query: 368 EFKTVVGLVKDF-SMR---------GLAHKAAKAHDK---------MLHGNYKPEGAIYN 408
+ + V+ MR L + + D+ M N K + Y+
Sbjct: 275 RVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYS 334
Query: 409 LLIFDHCRHGNVHKAYDMYKETVHSGVE 436
++ G + KA ++KE V +GV+
Sbjct: 335 TVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 4/193 (2%)
Query: 19 ERNLL---SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
E NL+ S ++ + V D +L M V TY+ +++ + A ++A
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+ ++M K G+ PD Y L G+ + + KA E+ ++ + P+ + +I C
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWC 410
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
G + A +F +M + GVSP+ + LM Y + KA ++ M G P+
Sbjct: 411 SNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENS 470
Query: 196 SPSLVIYNARIHG 208
+ L+ R+ G
Sbjct: 471 TFLLLAEAWRVAG 483
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 109/239 (45%), Gaps = 19/239 (7%)
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGIL--PDADTYG 128
KEA+ M + PDV Y +I C+ G KA + +M G PD TY
Sbjct: 182 KEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 129 ILILTLCRKG-----------RLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSK 177
ILI + CR G R+ +A +F EML G P Y L++ C +
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 178 ALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS-PDVVS 236
AL+L ++M KG +P+ ++ YN+ I V +E A+ ++R M +G P +
Sbjct: 302 ALELFEDMKTKGCVPNQVT-----YNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSST 356
Query: 237 YTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQ 295
YT +I + +A +L +EM E G+ E Y+ + D LS E STL + H +
Sbjct: 357 YTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKR 415
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLS--PDVDTYYPLICGFC----QTG-- 103
P V YN +I+ CR FK+A +L M G PD TY LI +C QTG
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 104 -----KLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPH 158
++ +A M +M+ +G +PD TY LI C+ R+ +A +LF +M +G P+
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 159 KYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEA 218
+ Y + YY E A+++ M G G+ P Y IH R EA
Sbjct: 318 QVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG---HGV-PGSSTYTPLIHALVETRRAAEA 373
Query: 219 LGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
++ M + GL P +Y V G
Sbjct: 374 RDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
+A+ M + M+ RGF P V TYN LI G C+ +R A+ + DM +G P+ TY I
Sbjct: 266 EANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI 325
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGI-LPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
+ T ++ A EM M G +P + TY LI L R ++A DL +EM+ G+
Sbjct: 326 RYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGL 385
Query: 156 SPHKYIY 162
P +Y Y
Sbjct: 386 VPREYTY 392
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
L+ L +G + +A F M P Y Y ++N C G F KA L D+M G
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 190 FL--PDGISPSLVIYN----ARIHGC--CVLGRVEEALGILRGMADMGLSPDVVSYTNVI 241
F PD + +++I + GC + R+ EA + R M G PDVV+Y +I
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 242 KGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
G CK +A EL +M KG + Y S +
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI 325
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 11/244 (4%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
D+A + + M G P + TY+ L+ + + R ++ +L +MA G PD+ +Y L
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
+ + ++G + +A + +M G P+A+TY +L+ + GR LFLEM
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRV 215
P Y L+ + G F + + L +M+ + I P + Y I C G
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVE-----ENIEPDMETYEGIIFACGKGGLH 438
Query: 216 EEALGILRGMADMGLSPDVVSYTNVIKGFCKIG---EPVKAFELKLEMDEKGIPLYEDIY 272
E+A IL+ M + P +YT VI+ F + E + AF M E G + +
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT---MHEVGSNPSIETF 495
Query: 273 QSLL 276
SLL
Sbjct: 496 HSLL 499
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 115/261 (44%), Gaps = 5/261 (1%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD V + + +++K ++L M G P + +YN L+ Y ++ KEA+G+
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
M G +P+ +TY L+ F Q+G+ ++ +M PDA TY ILI
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G + LF +M+ E + P Y ++ + C KG L I + + I
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGII-FACGKG----GLHEDARKILQYMTANDIV 454
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
PS Y I EEAL M ++G +P + ++ +++ F + G ++ +
Sbjct: 455 PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAI 514
Query: 257 KLEMDEKGIPLYEDIYQSLLD 277
+ + GIP D + + ++
Sbjct: 515 LSRLVDSGIPRNRDTFNAQIE 535
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 135/333 (40%), Gaps = 64/333 (19%)
Query: 122 PDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDL 181
P+ Y I+I L R+G L K ++F EM +GVS + YT L+N Y G + +L+L
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 182 PDEMINKGFLP-------------------------------DGISPSLVIYNARIHGCC 210
D M N+ P +GI P +V YN + C
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 211 VLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYED 270
+ G +EA + R M D G+ PD+ +Y+++++ F K+ K +L EM G
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG------ 312
Query: 271 IYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKK 330
L D +Y+ L+ + G++ +A + +M + SV +N +
Sbjct: 313 -------SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQS 365
Query: 331 ATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNE-FKTVVGLVKDFSMRGLAHKAA 389
+ ++ + + + P TY+ LIE FK VV L D
Sbjct: 366 GRYDDVRQLFLE--MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD----------- 412
Query: 390 KAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHK 422
M+ N +P+ Y +IF C G +H+
Sbjct: 413 -----MVEENIEPDMETYEGIIF-ACGKGGLHE 439
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G P + TYN L+ EA + R M G+ PD+ TY L+ F + +L K
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKV 301
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
++ +M G LPD +Y +L+ + G + +A +F +M G +P+ Y+ L+N
Sbjct: 302 CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+ G + L EM + PD + YN I G +E + + M +
Sbjct: 362 FGQSGRYDDVRQLFLEMKSSNTDPDAAT-----YNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 229 GLSPDVVSYTNVI 241
+ PD+ +Y +I
Sbjct: 417 NIEPDMETYEGII 429
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 163/406 (40%), Gaps = 42/406 (10%)
Query: 28 SLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRAD-RFKEAVGILRDMAK 82
+L+N Y + + + +L M SPS+ TYN +I+ R ++ +G+ +M
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAK-MVHKGILPDADTYGILILTLCRKGRLS 141
G+ PD+ TY L+ C LG EM + M GI+PD TY L+ T + RL
Sbjct: 241 EGIQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 142 KAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
K DL EM G P Y L+ Y G +A+ + +M G P+ + S+++
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 202 YNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMD 261
+ G GR ++ + M PD +Y +I+ F + G + L +M
Sbjct: 360 ---NLFGQS--GRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 262 EKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISS 321
E+ I D TY +I G DA ++ +Y D V SS
Sbjct: 415 EENIE-------------PDMETYEGIIFACGKGGLHEDA----RKILQYMTANDIVPSS 457
Query: 322 VRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSM 381
G+ IEA F Q L A ++T+ E SN +T L+ F+
Sbjct: 458 KAYTGV------IEA-------FGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFAR 504
Query: 382 RGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMY 427
GL ++ +++ +N I + + G +A Y
Sbjct: 505 GGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 550
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 74/157 (47%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
+ A +L+YM PS Y +I + +A ++EA+ M + G +P ++T++ L
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
+ F + G + ++ + +++V GI + DT+ I + G+ +A +++M +
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRC 558
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLP 192
P + +++ Y F + + +EM LP
Sbjct: 559 DPDERTLEAVLSVYSFARLVDECREQFEEMKASDILP 595
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 11/221 (4%)
Query: 35 VDKAHNMLKYMIVRG------FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPD 88
+D A ++ K M R F P + TYN LIH C + K+A+ + ++ G PD
Sbjct: 264 LDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPD 323
Query: 89 VDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFL 148
TY LI G C++ ++ A + +M + G +PD Y L+ + ++++A LF
Sbjct: 324 NSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFE 383
Query: 149 EMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHG 208
+M++EGV + Y L++ G L ++ KG D I+ S+V
Sbjct: 384 KMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQ----- 438
Query: 209 CCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
C G++E A+ ++ M G S D+V+ ++++ GF K G
Sbjct: 439 LCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGR 479
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 26/257 (10%)
Query: 47 VRGFSPSVATYNELIHGY-CRADRFKEAVGILRDMAKRG------LSPDVDTYYPLICGF 99
++ F +YN IHG+ C D A+ + ++M +R PD+ TY LI
Sbjct: 241 MKRFKFDTWSYNICIHGFGCWGD-LDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVL 299
Query: 100 CQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHK 159
C GK A + ++ G PD TY ILI C+ R+ A ++ EM G P
Sbjct: 300 CLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDT 359
Query: 160 YIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEAL 219
+Y L++ + ++A L ++M+ +G+ S YN I G GR E
Sbjct: 360 IVYNCLLDGTLKARKVTEACQLFEKMVQ-----EGVRASCWTYNILIDGLFRNGRAEAGF 414
Query: 220 GILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
+ + G D ++++ V C+ G+ A +L EM+ +G +
Sbjct: 415 TLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSV------------ 462
Query: 280 SDEVTYSTLINDFHAQG 296
D VT S+L+ FH QG
Sbjct: 463 -DLVTISSLLIGFHKQG 478
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 5/193 (2%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD + Y++D A + M GF P YN L+ G +A + EA
Sbjct: 321 EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQ 380
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+ M + G+ TY LI G + G+ F + + KG DA T+ I+ L LC
Sbjct: 381 LFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLC 440
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
R+G+L A L EM G S + L+ + +G + E + K +
Sbjct: 441 REGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWK-----EKLMKHIREGNL 495
Query: 196 SPSLVIYNARIHG 208
P+++ +NA +
Sbjct: 496 VPNVLRWNAGVEA 508
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%)
Query: 56 TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM 115
TYN ++ + + F+ A G+L M + + D+ TY +I G + G+ A + ++
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
+G D Y LI L + RL +A LF M G++P Y ++ G+
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIY 202
+A M++ G LP+ ++ +++ Y
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTILDY 778
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A +L M + +ATYN +I G + R A +L + K+G D+ Y LI
Sbjct: 649 ARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLIN 708
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
+ +L +A ++ M GI PD +Y +I + G+L +A+ ML G P
Sbjct: 709 ALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLP 768
Query: 158 HKYIYTRLMNYY---CFKGEFSKA 178
+ ++ +++Y K F KA
Sbjct: 769 N-HVTDTILDYLGKEMEKARFKKA 791
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 99/286 (34%), Gaps = 52/286 (18%)
Query: 44 YMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTG 103
Y + G+ S Y+++ CR E +L M + G++ D L+ ++G
Sbjct: 82 YSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSG 141
Query: 104 KLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG--------- 154
K A + M G + Y +++ L +K L A + ++L
Sbjct: 142 KFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTG 201
Query: 155 --------------------------VSPHKYIYTRLMNYYCFK---------------- 172
S K ++ +L FK
Sbjct: 202 RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCW 261
Query: 173 GEFSKALDLPDEMINKGFL-PDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
G+ AL L EM + + P + YN+ IH C+ G+ ++AL + + G
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
PD +Y +I+G CK A + EM G +Y LLD
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLD 367
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 76/201 (37%), Gaps = 19/201 (9%)
Query: 123 DADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP-HKYIYTRLMNYYCFKGEFSKALDL 181
D D + KG LS A LF GV+ Y Y +M+ + KG F A +
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 182 PDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI 241
D+M D + YN I G +GR + A +L + G D+V Y +I
Sbjct: 653 LDQMFENFCAAD-----IATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLI 707
Query: 242 KGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDA 301
K +A +L M GI D V+Y+T+I G L +A
Sbjct: 708 NALGKATRLDEATQLFDHMKSNGIN-------------PDVVSYNTMIEVNSKAGKLKEA 754
Query: 302 YCLESEMSEYSYLTDDVISSV 322
Y M + L + V ++
Sbjct: 755 YKYLKAMLDAGCLPNHVTDTI 775
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 129/284 (45%), Gaps = 36/284 (12%)
Query: 12 AVILDPDERNLLSQVHSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRA 67
+V++ + L +S+L VY ++D A + M R V +N ++ YC+
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQN 260
Query: 68 DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTY 127
+ +EAV ++++M K G+SP + T+ LI G+ Q GK A ++ KM GI D T+
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 128 GILILTLCRKGRLSKAFDLFLEMLREGVSPHKY-IYTRLMNYYCFKGEFSKALDLPDEMI 186
+I L G +A D+F +M GV P+ I + + C K ++ ++ +
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK-VINQGSEVHSIAV 379
Query: 187 NKGFLPDG-ISPSLV-------------------------IYNARIHGCCVLGRVEEALG 220
GF+ D + SLV +N+ I G C G +A
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYE 439
Query: 221 ILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
+ M D L P+++++ +I G+ K G+ +A +L M++ G
Sbjct: 440 LFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 158/382 (41%), Gaps = 49/382 (12%)
Query: 56 TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI---CGFCQTGKLGKAFEMK 112
T++ +I Y R +R++E + R M K G+ PD D +P I C C + GK +
Sbjct: 148 TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD-DFLFPKILQGCANCGDVEAGKV--IH 204
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
+ ++ G+ ++ + G L A F M V + ++ YC
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV----IAWNSVLLAYCQN 260
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
G+ +A++L EM +GISP LV +N I G LG+ + A+ +++ M G++
Sbjct: 261 GKHEEAVELVKEM-----EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA 315
Query: 233 DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDF 292
DV ++T +I G G +A ++ +M G+ + + VT + ++
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV-------------VPNAVTIMSAVSAC 362
Query: 293 HAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIP 352
+ + S + ++ DDV+ + + K +E R
Sbjct: 363 SCLKVINQGSEVHSIAVKMGFI-DDVLVGNSLVDMYSKCGKLEDAR-------------- 407
Query: 353 AYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIF 412
+ +D++ N + T ++ + G KA + +M N +P +N +I
Sbjct: 408 --KVFDSV----KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 413 DHCRHGNVHKAYDMYKETVHSG 434
+ ++G+ +A D+++ G
Sbjct: 462 GYIKNGDEGEAMDLFQRMEKDG 483
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 5/223 (2%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A + M+ RGFS + Y + C KEA +L +M + G+SP +T+ LI
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIG 382
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
GF + G K E MV +G++P + ++ ++ + +++A ++ + + +G P
Sbjct: 383 GFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVP 442
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
++ Y+ L+ + + +AL L EM + +SP ++ + I G C G+VE
Sbjct: 443 DEHTYSHLIRGFIEGNDIDQALKLFYEMEYR-----KMSPGFEVFRSLIVGLCTCGKVEA 497
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM 260
L+ M + P+ Y +IK F KIG+ A + EM
Sbjct: 498 GEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 19/249 (7%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P+ T +I C+ R KE V +L + + P V L+ + ++ ++ +
Sbjct: 232 PNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSL 291
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
+++ K ++ D Y I++ ++G L A +F EML+ G S + ++YT + C
Sbjct: 292 LKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCE 351
Query: 172 KGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
KG+ +A L EM G+SP +N I G G E+ L M GL
Sbjct: 352 KGDVKEAERLLSEM-----EESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIND 291
P ++ ++K KI +A E+ + +KG + DE TYS LI
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGF-------------VPDEHTYSHLIRG 453
Query: 292 FHAQGNLMD 300
F +GN +D
Sbjct: 454 F-IEGNDID 461
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 5/260 (1%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P+E + + L ++ + ++L + + PSV L+ R +E++ +
Sbjct: 232 PNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSL 291
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L+ + + + D Y ++ + G L A ++ +M+ +G ++ Y + + C
Sbjct: 292 LKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCE 351
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
KG + +A L EM GVSP+ + L+ + G K L+ + M+ +G +
Sbjct: 352 KGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM----- 406
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
PS +N + + V A IL D G PD +Y+++I+GF + + +A +L
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL 466
Query: 257 KLEMDEKGIPLYEDIYQSLL 276
EM+ + + ++++SL+
Sbjct: 467 FYEMEYRKMSPGFEVFRSLI 486
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 117/254 (46%), Gaps = 7/254 (2%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
S V +L +++++ ++LK ++++ Y+ +++ + A + +M +R
Sbjct: 274 SLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQR 333
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
G S + Y + C+ G + +A + ++M G+ P +T+ LI R G K
Sbjct: 334 GFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKG 393
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
+ M+ G+ P + ++ ++A ++ + I+KGF+PD + Y+
Sbjct: 394 LEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHT-----YS 448
Query: 204 ARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE-MDE 262
I G +++AL + M +SP + ++I G C G+ V+A E L+ M +
Sbjct: 449 HLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGK-VEAGEKYLKIMKK 507
Query: 263 KGIPLYEDIYQSLL 276
+ I DIY +L+
Sbjct: 508 RLIEPNADIYDALI 521
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
V S+ + V++A+ +L I +GF P TY+ LI G+ + +A+ + +M R +
Sbjct: 416 VKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKM 475
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
SP + + LI G C GK+ + M + I P+AD Y LI + G + A
Sbjct: 476 SPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADR 535
Query: 146 LFLEML 151
++ EM+
Sbjct: 536 VYNEMI 541
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
+K + M+ RG PS + +NE++ + + A IL +G PD TY L
Sbjct: 391 EKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHL 450
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
I GF + + +A ++ +M ++ + P + + LI+ LC G++ M + +
Sbjct: 451 IRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLI 510
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
P+ IY L+ + G+ + A + +EMI+
Sbjct: 511 EPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 114/276 (41%), Gaps = 22/276 (7%)
Query: 1 MMITASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNEL 60
++I A +++ P + +L V SLL+ Y++ S + ++ L
Sbjct: 128 LLIDARALIESSLLNSPPDSDL---VDSLLDTYEIS--------------SSTPLVFDLL 170
Query: 61 IHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGI 120
+ Y + + + + + G + V T LI ++ + + + K I
Sbjct: 171 VQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRI 230
Query: 121 LPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALD 180
P+ T I+I LC++GRL + DL + + P + T L+ + +++
Sbjct: 231 YPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMS 290
Query: 181 LPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNV 240
L ++ K + D I S+V+Y G V R + M G S + YT
Sbjct: 291 LLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSAR-----KVFDEMLQRGFSANSFVYTVF 345
Query: 241 IKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
++ C+ G+ +A L EM+E G+ Y++ + L+
Sbjct: 346 VRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLI 381
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 158/396 (39%), Gaps = 55/396 (13%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ SL + A ++ M +G P +YN +IHG C+ A +L + ++
Sbjct: 314 IDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEF 373
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P TY L+ C+ GKA + M+ K Y I + LC ++ +
Sbjct: 374 FPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILN 433
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
+ + ML+ P +Y ++N C G A+ + D+M+ F +P V N
Sbjct: 434 VLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKF----CAPDAVTLNTV 489
Query: 206 IHGCCVLGRVEEALGIL-RGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
+ G GR EEAL +L R M + + P VV+Y VI+G K+ + +A + ++++
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKAS 549
Query: 265 IPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVIS---- 320
+ +D TY+ +I D C+ +++ DDVI
Sbjct: 550 VT-------------ADSTTYAIII----------DGLCVTNKVDMAKKFWDDVIWPSGR 586
Query: 321 ------SVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVG 374
+ + GL + +A L + D +IP Y+T+I CS +
Sbjct: 587 HDAFVYAAFLKGLCQSGYLSDACHFL--YDLADSGAIPNVVCYNTVIAECSRS------- 637
Query: 375 LVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLL 410
GL +A + ++M P+ + +L
Sbjct: 638 --------GLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 170/453 (37%), Gaps = 78/453 (17%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGF-------------------------- 50
PD NL S +HSL + + D+AH + GF
Sbjct: 88 PDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGV 147
Query: 51 -----------SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGF 99
PS+ YN L++ C R +A ++ DM RG PDV T+ LI G+
Sbjct: 148 IHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGY 207
Query: 100 CQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML-----REG 154
C+ +L A ++ +M GI P++ T +LI + + L E+
Sbjct: 208 CEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETD 267
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
S + L++ C +G F+ ++ + M L + ++ Y I C R
Sbjct: 268 TSMKAAAFANLVDSMCREGYFNDIFEIAENM----SLCESVNVEFA-YGHMIDSLCRYRR 322
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
A I+ M GL P SY +I G CK G ++A++L E E E Y+
Sbjct: 323 NHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKL 382
Query: 275 LLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTI 334
L++ L E+ D N+++ L E ++ + I ++ + GL
Sbjct: 383 LMESLCKEL-------DTGKARNVLELM-LRKEGADRTR-----IYNIYLRGLCVMDNPT 429
Query: 335 EAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDK 394
E LV DC P T +T+I GL K G A K D
Sbjct: 430 EILNVLVSMLQGDCR--PDEYTLNTVIN-----------GLCK----MGRVDDAMKVLDD 472
Query: 395 MLHGNY-KPEGAIYNLLIFDHCRHGNVHKAYDM 426
M+ G + P+ N ++ G +A D+
Sbjct: 473 MMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV 505
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 5/232 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L P + + +H L +A+ +L+ F PS TY L+ C+ +A
Sbjct: 338 LKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKAR 397
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L M ++ + Y + G C + + M+ PD T +I L
Sbjct: 398 NVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGL 457
Query: 135 CRKGRLSKAFDLFLEMLR-EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
C+ GR+ A + +M+ + +P +M +G +ALD+ +N+ +
Sbjct: 458 CKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV----LNRVMPEN 513
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFC 245
I P +V YNA I G L + +EA+ + + ++ D +Y +I G C
Sbjct: 514 KIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLC 565
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 25/269 (9%)
Query: 55 ATYNELIHGYCRADRF-KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKA 113
A + IH C R EA+ IL + RG PD +I C G+ +A
Sbjct: 55 AYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFL 114
Query: 114 KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML--REGVSPHKYIYTRLMNYYCF 171
+ G +PD T ++I L + ++ ++ P Y RLMN C
Sbjct: 115 LFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCT 174
Query: 172 KGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
A L +M N+G LPD +V + I G C + +E A + M G+
Sbjct: 175 IYRVIDAHKLVFDMRNRGHLPD-----VVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIR 229
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEM-----DEKGIPLYEDIYQSLLDDLSDEVTYS 286
P+ ++ + +I GF K+ + +L E+ +E + + +L+D + E ++
Sbjct: 230 PNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFN 289
Query: 287 TL------------INDFHAQGNLMDAYC 303
+ +N A G+++D+ C
Sbjct: 290 DIFEIAENMSLCESVNVEFAYGHMIDSLC 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNML-KYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
PD L + + LL + ++A ++L + M P V YN +I G + + EA+
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMS 540
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+ + K ++ D TY +I G C T K+ A + ++ DA Y + LC
Sbjct: 541 VFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC 600
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
+ G LS A ++ G P+ Y ++ G +A + +EM G PD +
Sbjct: 601 QSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAV 660
Query: 196 S 196
+
Sbjct: 661 T 661
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 44/224 (19%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIV-RGFSPSVATYNELIHGYCRADR 69
K ++PD + + VH+L V +A N++K M +G P+V TYN LI C+A +
Sbjct: 329 KKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARK 388
Query: 70 FKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGI 129
+EA + +M ++GL P + TY+ + +TG+ + FE+ AKM G P +TY +
Sbjct: 389 TEEAKQVFDEMLEKGLFPTIRTYHAFM-RILRTGE--EVFELLAKMRKMGCEPTVETYIM 445
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
LI LCR +F L L DEM K
Sbjct: 446 LIRKLCR-----------------------------------WRDFDNVLLLWDEMKEKT 470
Query: 190 FLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPD 233
PD L Y IHG + G++EEA G + M D G+ P+
Sbjct: 471 VGPD-----LSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 110/271 (40%), Gaps = 29/271 (10%)
Query: 56 TYNELIHGYCRA-DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAK 114
++N +++G+C +EA + +M G+ DV +Y +I + + G L K ++ +
Sbjct: 268 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327
Query: 115 MVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE-GVSPHKYIYTRLMNYYCFKG 173
M + I PD Y ++ L + +S+A +L M E G+ P+ Y L+ C
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 174 EFSKALDLPDEMINKGFLPD---------------------------GISPSLVIYNARI 206
+ +A + DEM+ KG P G P++ Y I
Sbjct: 388 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLI 447
Query: 207 HGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIP 266
C + L + M + + PD+ SY +I G G+ +A+ EM +KG+
Sbjct: 448 RKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMR 507
Query: 267 LYEDIYQSLLDDLSDEVTYSTLINDFHAQGN 297
E++ + S + I D + N
Sbjct: 508 PNENVEDMIQSWFSGKQYAEQRITDSKGEVN 538
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 9/263 (3%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
+ + LL + V+ V KA N + + L+ CR +A G L
Sbjct: 196 NSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA-GHL 254
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQT-GKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
K D ++ ++ G+C G +A + +M + G+ D +Y +I +
Sbjct: 255 IFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSK 314
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G L+K LF M +E + P + +Y +++ S+A +L M + GI
Sbjct: 315 GGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEE----KGIE 370
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
P++V YN+ I C + EEA + M + GL P + +Y ++ + GE V FEL
Sbjct: 371 PNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTGEEV--FEL 427
Query: 257 KLEMDEKGIPLYEDIYQSLLDDL 279
+M + G + Y L+ L
Sbjct: 428 LAKMRKMGCEPTVETYIMLIRKL 450
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 12/246 (4%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A ++K M G P V TY +I+GYC A + +A + ++M+K + TY ++
Sbjct: 184 ADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILE 243
Query: 98 GFCQTGKLGKAFEMKAKMVHKG----ILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
G C++G + +A E+ A+M + I P+A TY ++I C K R+ +A + M
Sbjct: 244 GVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNR 303
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALD-LPDEMINKGFLPDGISPSLVIYNARIHGCCVL 212
G P++ L+ E KAL L D+++ G G+S S +A + +
Sbjct: 304 GCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG----GVSLSECFSSATV-SLIRM 358
Query: 213 GRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI--PLYED 270
R EEA I R M G+ PD ++ ++V + C + + F L E+++K + + D
Sbjct: 359 KRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSD 418
Query: 271 IYQSLL 276
I+ LL
Sbjct: 419 IHAVLL 424
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 120/268 (44%), Gaps = 14/268 (5%)
Query: 8 KNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRA 67
K V L PD S ++ N ++D A + K M + TY+ ++ G C++
Sbjct: 189 KEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKS 248
Query: 68 DRFKEAVGILRDMAKRG----LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPD 123
+ A+ +L +M K +SP+ TY +I FC+ ++ +A + +M ++G +P+
Sbjct: 249 GDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPN 308
Query: 124 ADTYGILILTLCRKGRLSKAFDLFLEMLRE--GVSPHKYIYTRLMNYYCFKGEFSKALDL 181
T +LI + KA ++ L + GVS + + ++ K + +A +
Sbjct: 309 RVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMK-RWEEAEKI 367
Query: 182 PDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM--ADMGLSPDVVSYTN 239
M+ +G PDG++ S V C+L R + + + + D+ + D +
Sbjct: 368 FRLMLVRGVRPDGLACSHVFREL-----CLLERYLDCFLLYQEIEKKDVKSTIDSDIHAV 422
Query: 240 VIKGFCKIGEPVKAFELKLEMDEKGIPL 267
++ G C+ G +A +L M +K + L
Sbjct: 423 LLLGLCQQGNSWEAAKLAKSMLDKKMRL 450
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 14/221 (6%)
Query: 95 LICGFCQTGKLG-KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
++ C L +A + K + D Y ++I KG L+ A L EM
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
G+ P YT ++N YC G+ A L EM + + ++ Y+ + G C G
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVT-----YSRILEGVCKSG 249
Query: 214 RVEEALGILRGM--ADMG--LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG-IPLY 268
+E AL +L M D G +SP+ V+YT VI+ FC+ +A + M +G +P
Sbjct: 250 DMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNR 309
Query: 269 ED---IYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLES 306
+ Q +L++ D S LI+ G + + C S
Sbjct: 310 VTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSS 350
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 22/284 (7%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
+ PSV Y ++ Y + + K A +M + G PD ++C + + G+
Sbjct: 183 SYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAM 242
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ + IL Y ++ +L +K K DL+LEM+ EGV P+++ YT +++
Sbjct: 243 LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSS 302
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
Y +G +AL EM + GF+P+ ++ Y++ I G E+A+G+ M
Sbjct: 303 YAKQGFKEEALKAFGEMKSLGFVPEEVT-----YSSVISLSVKAGDWEKAIGLYEDMRSQ 357
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
G+ P + ++ + K KA L +M+ IP +DEV +
Sbjct: 358 GIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIP-------------ADEVIRGLI 404
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDD----VISSVRINGLN 328
I + G DA + E + L D+ +S V +N N
Sbjct: 405 IRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGN 448
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 132/299 (44%), Gaps = 23/299 (7%)
Query: 3 ITASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIH 62
I+ +C K + LD N L + ++L ++ A + + M G S+ TYN +I
Sbjct: 761 ISRTCLE-KNIELDTVGYNTL--IKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS 817
Query: 63 GYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILP 122
Y R + +A+ I + + GL D Y +I + + GK+ +A + ++M KGI P
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Query: 123 DADTYGILILTLCRKGRLSKAFDLFLE-MLREGVSPHKYIYTRLMNYYCFKGEFSKALDL 181
+Y +++ +C RL D L+ M R G Y L+ Y +F++A
Sbjct: 878 GTPSYNMMV-KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKT 936
Query: 182 PDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI 241
+ KG +P S + +A + G +EEA M++ G+SPD ++
Sbjct: 937 ITLVKEKG-IPLSHSHFSSLLSALVKA----GMMEEAERTYCKMSEAGISPDSACKRTIL 991
Query: 242 KGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMD 300
KG+ G+ EKGI YE + +S ++D D S + + + A G D
Sbjct: 992 KGYMTCGDA-----------EKGILFYEKMIRSSVED--DRFVSSVVEDLYKAVGKEQD 1037
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 9/247 (3%)
Query: 24 SQVHSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRD 79
S + S+++ Y ++ A+ + +G P T + L++ + +EA I R
Sbjct: 705 SVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRT 764
Query: 80 MAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
++ + D Y LI + GKL A E+ +M G+ TY +I R +
Sbjct: 765 CLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQ 824
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSL 199
L KA ++F R G+ + IYT ++ +Y G+ S+AL L EM KG P +PS
Sbjct: 825 LDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPG--TPS- 881
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
YN + C E +L+ M G D+ +Y +I+ + + + +A +
Sbjct: 882 --YNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITL 939
Query: 260 MDEKGIP 266
+ EKGIP
Sbjct: 940 VKEKGIP 946
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 8/216 (3%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GF P TY+ +I +A +++A+G+ DM +G+ P T ++ + +T KA
Sbjct: 323 GFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKA 382
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ A M I D G++I + G A +F E R + + Y +
Sbjct: 383 LSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQV 442
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+ G KALD+ + M + I S Y + + V+ A R ++
Sbjct: 443 HLNSGNVVKALDVIEMMKTR-----DIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKT 497
Query: 229 GLSPDVVSYTNVIKGFCK--IGEPVKAFELKLEMDE 262
GL PD S +++ + + +GE K F ++ +D+
Sbjct: 498 GL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQ 532
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 103 GKLGKAFEM-KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYI 161
G L KAFE+ K+ +H G++P+ +Y +L+ C LS A+ LF +ML V P
Sbjct: 169 GYLQKAFELFKSSRLH-GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 162 YTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGI 221
Y L+ +C KG+ + A++L D+M+NKGF+PD I G C G +E
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPD---------RTLIGGLCDQGMFDEGKKY 278
Query: 222 LRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD 281
L M G SP ++KGFC G+ +A ++ + + G L+ D ++ ++ + +
Sbjct: 279 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 338
Query: 282 E 282
E
Sbjct: 339 E 339
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+ KA + K + G P+ +YN L+ +C D A + M +R + PDVD+Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
LI GFC+ G++ A E+ M++KG +PD LI LC +G + EM+ +G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKG 286
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
SPH + L+ +C G+ +A D+ + ++ G
Sbjct: 287 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 17 PDER--NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
P+ R NLL Q L + + A+ + M+ R P V +Y LI G+CR + A+
Sbjct: 188 PNTRSYNLLMQAFCLNDDLSI--AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+L DM +G PD LI G C G + + +M+ KG P L+
Sbjct: 246 ELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 301
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSK 177
C G++ +A D+ +++ G + H + ++ C + E K
Sbjct: 302 CSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
QV+ A +L M+ +GF P LI G C F E L +M +G SP
Sbjct: 240 QVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSN 295
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLE 149
L+ GFC GK+ +A ++ ++ G +DT+ ++I +C + S+ LFLE
Sbjct: 296 CLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE-SEKIKLFLE 350
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 124/258 (48%), Gaps = 28/258 (10%)
Query: 19 ERNLLSQVHSLLNVYQ----VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+RNL S +S+L+ Y VD A +L M + G P + T+N L+ GY K+A+
Sbjct: 152 DRNL-SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAI 210
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTG--KLGKAFEMKAKMVHKGILPDADTYGILIL 132
+L+ M GL P + L+ + G KLGKA +H IL + Y + +
Sbjct: 211 AVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA-------IHGYILRNQLWYDVYVE 263
Query: 133 TL-----CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
T + G L A +F M + + + + L +Y C + ++AL + E
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL-SYACLLKD-AEALMIRME--- 318
Query: 188 KGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKI 247
+GI P + +N+ G LG+ E+AL ++ M + G++P+VVS+T + G K
Sbjct: 319 ----KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKN 374
Query: 248 GEPVKAFELKLEMDEKGI 265
G A ++ ++M E+G+
Sbjct: 375 GNFRNALKVFIKMQEEGV 392
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 49/245 (20%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
+ ++ +N L+ G A K+A ++ M K G+ PD T+ L G+ GK KA +
Sbjct: 288 AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALD 347
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPH------------ 158
+ KM KG+ P+ ++ + + G A +F++M EGV P+
Sbjct: 348 VIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILG 407
Query: 159 -----------------------KYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
Y+ T L++ Y G+ A+++ + NK
Sbjct: 408 CLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK------- 460
Query: 196 SPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCK----IGEPV 251
SL +N + G + GR EE + M + G+ PD +++T+V+ CK + E
Sbjct: 461 --SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS-VCKNSGLVQEGW 517
Query: 252 KAFEL 256
K F+L
Sbjct: 518 KYFDL 522
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 12/229 (5%)
Query: 27 HSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLS 86
SL +V + D+A + K M G+ P TY++L+ G C+A R +EA G+L M +G
Sbjct: 378 RSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCF 437
Query: 87 PDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDL 146
PD+ T+ LI G C+ +L KA A M+ KG D++ +LI + A
Sbjct: 438 PDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIF 497
Query: 147 FLEMLREG-VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
+EM++ V P + Y L++ + +ALDL +M+ K P Y
Sbjct: 498 LMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLL-QMMKKQNYP--------AYAEA 548
Query: 206 IHG-CCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
G G +E+A L ++ SP +Y +VI+ F + G A
Sbjct: 549 FDGYLAKFGTLEDAKKFLDVLSSKD-SPSFAAYFHVIEAFYREGRLTDA 596
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 15/236 (6%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
+ S TYN + R + E ++ +M G D+DTY + F ++ + +
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETV 318
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE----GVSPHKYIYTRL 165
++ M+ P +L+ L G + DL + R+ G S K +Y +
Sbjct: 319 KLYEYMMDGPFKPSIQDCSLLLRYLS--GSPNPDLDLVFRVSRKYESTGKSLSKAVYDGI 376
Query: 166 MNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM 225
G F +A ++ M N G+ PD I+ Y+ + G C R+EEA G+L M
Sbjct: 377 HRSLTSVGRFDEAEEITKAMRNAGYEPDNIT-----YSQLVFGLCKAKRLEEARGVLDQM 431
Query: 226 ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD 281
G PD+ ++T +I+G CK E KA M EKG DI +LLD L D
Sbjct: 432 EAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGF----DIDSNLLDVLID 483
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 98/253 (38%), Gaps = 21/253 (8%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G S S A Y+ + RF EA I + M G PD TY L+ G C+ +L +A
Sbjct: 365 GKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEA 424
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ +M +G PD T+ ILI C+ L KA F ML +G + L++
Sbjct: 425 RGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDG 484
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+ +F A EM+ + P Y I + + EEAL +L+ M
Sbjct: 485 FVIHNKFEGASIFLMEMVKNA----NVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQ 540
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
++ + F + + K ++ + K P + Y +
Sbjct: 541 NYPAYAEAFDGYLAKFGTLEDAKKFLDV---LSSKDSPSF--------------AAYFHV 583
Query: 289 INDFHAQGNLMDA 301
I F+ +G L DA
Sbjct: 584 IEAFYREGRLTDA 596
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 10/208 (4%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD V L ++++A +L M +G P + T+ LI G+C+ + +A+
Sbjct: 402 EPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALA 461
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMV-HKGILPDADTYGILILTL 134
+M ++G D + LI GF K A +MV + + P TY +LI L
Sbjct: 462 CFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKL 521
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ + +A DL L+M+++ P Y F G +K L D L
Sbjct: 522 LKIKKSEEALDL-LQMMKKQNYP---AYAE-----AFDGYLAKFGTLEDAKKFLDVLSSK 572
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGIL 222
SPS Y I GR+ +A +L
Sbjct: 573 DSPSFAAYFHVIEAFYREGRLTDAKNLL 600
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 5/246 (2%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+V++ +LK M+ GF P +Y+ LI G R R ++V I ++ +G PD + Y
Sbjct: 270 EVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYN 329
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
+IC F ++ +M+ + P+ +TY L+ L + ++S A ++F EML
Sbjct: 330 AMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSR 389
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
GV P + T + C G A+ +I + G S Y + G
Sbjct: 390 GVLPTTGLVTSFLKPLCSYGPPHAAM-----VIYQKSRKAGCRISESAYKLLLKRLSRFG 444
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
+ L + M + G DV Y ++ G C IG A + E KG +Y
Sbjct: 445 KCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYS 504
Query: 274 SLLDDL 279
L L
Sbjct: 505 RLSSKL 510
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 56 TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM 115
+YN +I G+ + +E +L++M + G PD +Y LI G +TG++ + E+ +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
HKG +PDA+ Y +I ++ + ML E P+ Y++L++ +
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKV 376
Query: 176 SKALDLPDEMINKGFLP-DGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
S AL++ +EM+++G LP G+ S + C G A+ I + G
Sbjct: 377 SDALEIFEEMLSRGVLPTTGLVTSF------LKPLCSYGPPHAAMVIYQKSRKAGCRISE 430
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
+Y ++K + G+ + EM E G P ++Y+ ++D L
Sbjct: 431 SAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGL 475
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 135/314 (42%), Gaps = 21/314 (6%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++PD L + S + V+ V +A + + G S ++N L+ C A
Sbjct: 182 VNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAK 241
Query: 75 GILRDMAKRGLSP-DVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
+ AK+G P D +Y +I G+ + G++ + ++ +MV G PD +Y LI
Sbjct: 242 SVFN--AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEG 299
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
L R GR++ + ++F + +G P +Y ++ + +F +++ M L +
Sbjct: 300 LGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRM-----LDE 354
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
P+L Y+ + G +V +AL I M G+ P T+ +K C G P A
Sbjct: 355 ECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAA 414
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
+ + + G + E Y+ LL LS F G L++ + EM E Y
Sbjct: 415 MVIYQKSRKAGCRISESAYKLLLKRLS----------RFGKCGMLLNVW---DEMQESGY 461
Query: 314 LTDDVISSVRINGL 327
+D + ++GL
Sbjct: 462 PSDVEVYEYIVDGL 475
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 114/263 (43%), Gaps = 14/263 (5%)
Query: 66 RADRFKEAVGILRDMAKR--GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPD 123
R + EA+ D A R G++ DV +Y ++ + ++ MV +G+ PD
Sbjct: 126 RGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPD 185
Query: 124 ADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPD 183
+ I + + R + +A +LF E GV + L+ C + S A + +
Sbjct: 186 LECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN 245
Query: 184 EMINKGFLP-DGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIK 242
KG +P D S YN I G LG VEE +L+ M + G PD +SY+++I+
Sbjct: 246 A--KKGNIPFDSCS-----YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIE 298
Query: 243 GFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAY 302
G + G + E+ + KG ++Y +++ + + + + ++D
Sbjct: 299 GLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYR---RMLDEE 355
Query: 303 CLESEMSEYSYLTDDVISSVRIN 325
C E + YS L +I +++
Sbjct: 356 C-EPNLETYSKLVSGLIKGRKVS 377
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 74/177 (41%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + + + ++ D++ + M+ P++ TY++L+ G + + +A+ I
Sbjct: 323 PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
+M RG+ P + C G A + K G Y +L+ L R
Sbjct: 383 FEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSR 442
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
G+ +++ EM G +Y +++ C G A+ + +E + KGF P+
Sbjct: 443 FGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPN 499
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 61/150 (40%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+P+ V L+ +V A + + M+ RG P+ + C A+
Sbjct: 357 EPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMV 416
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
I + K G Y L+ + GK G + +M G D + Y ++ LC
Sbjct: 417 IYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLC 476
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRL 165
G L A + E +R+G P++++Y+RL
Sbjct: 477 IIGHLENAVLVMEEAMRKGFCPNRFVYSRL 506
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 8/230 (3%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G P + TYN +I +C + + I+ +M ++G+ P+ ++ +I GF K +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
++ A M +G+ TY I I +LC++ + +A L ML G+ P+ Y+ L++
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+C + +F +A L M+N+G PD Y I+ C G E AL + + +
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDS-----ECYFTLIYYLCKGGDFETALSLCKESMEK 356
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK---GIPLYEDIYQSL 275
P +++ G K + +A EL ++ EK + L+ ++ +L
Sbjct: 357 NWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAAL 406
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 5/174 (2%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
M +G P+ +++ +I G+ D+ E +L M RG++ V TY I C+ K
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
+A + M+ G+ P+ TY LI C + +A LF M+ G P Y
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT 332
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEA 218
L+ Y C G+F AL L E + K ++ PS I + ++G +VEEA
Sbjct: 333 LIYYLCKGGDFETALSLCKESMEKNWV-----PSFSIMKSLVNGLAKDSKVEEA 381
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+ D+ +L M RG + V+TYN I C+ + KEA +L M G+ P+ TY
Sbjct: 237 KSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYS 296
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI GFC +A ++ MV++G PD++ Y LI LC+ G A L E + +
Sbjct: 297 HLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEK 356
Query: 154 GVSPHKYIYTRLMN 167
P I L+N
Sbjct: 357 NWVPSFSIMKSLVN 370
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 29/280 (10%)
Query: 64 YCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI--CGFCQTGKLGKAFEMKAKMVHKGIL 121
Y +A+ ++ + RD+ K +S V + L+ C + K K ++ ++ GI
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMY-GIE 184
Query: 122 PDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN-YYCFKGEFSKALD 180
PD +TY +I C G S ++ + EM R+G+ P+ + +++ +Y A D
Sbjct: 185 PDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFY--------AED 236
Query: 181 LPDEMINK--GFLPD-GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSY 237
DE + K + D G++ + YN RI C + +EA +L GM G+ P+ V+Y
Sbjct: 237 KSDE-VGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTY 295
Query: 238 TNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGN 297
+++I GFC + +A +L M +G D Y TLI G+
Sbjct: 296 SHLIHGFCNEDDFEEAKKLFKIMVNRGCK-------------PDSECYFTLIYYLCKGGD 342
Query: 298 LMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAK 337
A L E E +++ I +NGL K + EAK
Sbjct: 343 FETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAK 382
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%)
Query: 25 QVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
++ SL + +A +L M+ G P+ TY+ LIHG+C D F+EA + + M RG
Sbjct: 263 RIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRG 322
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
PD + Y+ LI C+ G A + + + K +P L+ L + ++ +A
Sbjct: 323 CKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAK 382
Query: 145 DLF 147
+L
Sbjct: 383 ELI 385
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 189/478 (39%), Gaps = 84/478 (17%)
Query: 37 KAHNMLKYMIVRGFSPSVATY-----------------------------------NELI 61
+A + K + G PS+ +Y N +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 62 HGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG-- 119
+ + + ++AV L M + GL+P TY LI G+ GK ++ E+ M+ +G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 120 -ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
+ P+ T+ +L+ C+K ++ +A+++ +M GV P Y + Y KGE +A
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYT 238
E++ K + + P+ + G C GRV + L +R M +M + ++V +
Sbjct: 243 ---ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 239 NVIKGFCKIGEPVKAFELKL---------EMDEKGIPLYEDIYQSLLDDL---SDEVTYS 286
++I GF ++ + E+ L E++ G + +L+ + +D +TYS
Sbjct: 300 SLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYS 359
Query: 287 TLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQ 346
T++N + + G + A + EM + D S+ G + +A+ L +
Sbjct: 360 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE 419
Query: 347 DCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGA 405
S P + T+I CSN G A + +KM P
Sbjct: 420 ---SRPNVVIFTTVISGWCSN----------------GSMDDAMRVFNKMCKFGVSPNIK 460
Query: 406 IYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPSFTWPRPGLHFFFVAQAWPVA 463
+ L++ + KA ++ + GV + E S F +A+AW VA
Sbjct: 461 TFETLMWGYLEVKQPWKAEEVLQMMRGCGV---KPENS--------TFLLLAEAWRVA 507
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 161/385 (41%), Gaps = 27/385 (7%)
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMK 112
+V + +L++ R EA + + +A+ G P + +Y L+ + G +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
+++ G D+ + +I G + A L+M G++P Y L+ Y
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
G+ ++ +L D M+ +G + G P++ +N + C +VEEA +++ M + G+ P
Sbjct: 164 GKPERSSELLDLMLEEGNVDVG--PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 233 DVVSYTNVIKGFCKIGEPVKA---FELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLI 289
D V+Y + + + GE V+A K+ M EK P + T ++
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKP--------------NGRTCGIVV 267
Query: 290 NDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNK---KATTIEAKRSLVRWFYQ 346
+ +G + D M E + V+ + ING + + E +L+ +
Sbjct: 268 GGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFN 327
Query: 347 DCLSIPAYRTYD----TLIENCS-NNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYK 401
+ + + + TL++ C+ + T ++ +S G KAA+ +M+ K
Sbjct: 328 EEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 387
Query: 402 PEGAIYNLLIFDHCRHGNVHKAYDM 426
P+ Y++L + R KA ++
Sbjct: 388 PDAHAYSILAKGYVRAKEPKKAEEL 412
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
++KA + K M+ G P Y+ L GY RA K+A +L + P+V +
Sbjct: 371 MEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTT 429
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE- 153
+I G+C G + A + KM G+ P+ T+ L+ + KA ++ L+M+R
Sbjct: 430 VISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV-LQMMRGC 488
Query: 154 GVSPHKYIYTRLMNYYCFKG---EFSKALD 180
GV P + L + G E +KA++
Sbjct: 489 GVKPENSTFLLLAEAWRVAGLTDESNKAIN 518
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 18/267 (6%)
Query: 30 LNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR-GLSPD 88
L+ VD+A M+ + P+ T+N ++ + R + I R+M + G SP+
Sbjct: 226 LDDVSVDEAKKMIGKI-----KPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPN 280
Query: 89 VDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFL 148
V +Y L+ +C G + +A ++ +M +G++ D Y +I LC + KA +LF
Sbjct: 281 VYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFR 340
Query: 149 EMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHG 208
+M +G+ Y L+N YC G+ L + EM KGF DG++ A + G
Sbjct: 341 DMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLT-----IEALVEG 395
Query: 209 CC---VLGRVEEALGILR-GMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
C RV EA I++ + + P Y ++K C+ G+ +A ++ EM KG
Sbjct: 396 LCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG 455
Query: 265 IPLYEDIYQSLLDD---LSDEVTYSTL 288
++ Y++ +D + DE T + L
Sbjct: 456 FKPSQETYRAFIDGYGIVGDEETSALL 482
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 28/258 (10%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ S L+ ++D A +++ + RG + ++T N LI R +RG
Sbjct: 169 IKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSR---------------RRGA 213
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
S Y + G + + KM+ K I P+A T+ ++++ R+G
Sbjct: 214 SNGYKMYREVF------GLDDVSVDEAKKMIGK-IKPNATTFNSMMVSFYREGETEMVER 266
Query: 146 LFLEMLRE-GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
++ EM E G SP+ Y Y LM YC +G S+A + +EM +G + D +V YN
Sbjct: 267 IWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYD-----IVAYNT 321
Query: 205 RIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
I G C V +A + R M G+ ++Y +++ G+CK G+ + EM KG
Sbjct: 322 MIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKG 381
Query: 265 IPLYEDIYQSLLDDLSDE 282
++L++ L D+
Sbjct: 382 FEADGLTIEALVEGLCDD 399
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
+ + L + ++V KA + + M ++G + TY L++GYC+A + + R+M ++
Sbjct: 321 TMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRK 380
Query: 84 GLSPDVDTYYPLICGFCQT---GKLGKAFEMKAKMVHKGIL-PDADTYGILILTLCRKGR 139
G D T L+ G C ++ +A ++ V + + P + Y +L+ LC G+
Sbjct: 381 GFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGK 440
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEM 185
+ +A ++ EM+ +G P + Y ++ Y G+ + L EM
Sbjct: 441 MDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEM 486
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 144/411 (35%), Gaps = 96/411 (23%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
D DE +L SL+ K++N G +P V ++ LI + AV
Sbjct: 138 DEDEDRVLKVFRSLI------KSYNRC------GSAPFV--FDLLIKSCLDSKEIDGAVM 183
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM-------------KAKMVHKGILP 122
++R + RG++ + T LI + ++M +AK + I P
Sbjct: 184 VMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKP 243
Query: 123 DADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLP 182
+A T+ ++++ R+G ++ EM E
Sbjct: 244 NATTFNSMMVSFYREGETEMVERIWREMEEEV---------------------------- 275
Query: 183 DEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIK 242
G SP++ YN + C G + EA + M G+ D+V+Y +I
Sbjct: 276 -----------GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIG 324
Query: 243 GFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAY 302
G C E VKA EL +M KGI +TY L+N + G++
Sbjct: 325 GLCSNFEVVKAKELFRDMGLKGIE-------------CTCLTYEHLVNGYCKAGDVDSGL 371
Query: 303 CLESEMSEYSYLTDDVISSVRINGL--NKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTL 360
+ EM + D + + GL ++ + +V+ ++ + P+ Y+
Sbjct: 372 VVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYEL- 430
Query: 361 IENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLI 411
LVK G +A +M+ +KP Y I
Sbjct: 431 --------------LVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFI 467
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 6/243 (2%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR-GLSPDVDTYYPLI 96
AH + M +V ++N L+ Y + + EA+ +++ ++ G++PD+ TY +I
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
C+ G + + ++ G PD ++ L+ R+ + ++ M + +S
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P+ Y + +F+ AL+L D M +GISP + YNA I V +E
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKT-----EGISPDVHTYNALITAYRVDNNLE 315
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
E + M + GL+PD V+Y +I CK G+ +A E+ E + + ++Y+ ++
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Query: 277 DDL 279
+ L
Sbjct: 376 ERL 378
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
M + SP++ +YN + G R +F +A+ ++ M G+SPDV TY LI +
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
L + + +M KG+ PD TY +LI LC+KG L +A ++ E ++ + +Y
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKP 373
Query: 165 LMNYYCFKGEFSKALDL 181
++ G+ +A L
Sbjct: 374 VVERLMGAGKIDEATQL 390
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD + + +L +D ++ + + GF P + ++N L+ + R + F E
Sbjct: 189 ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD 248
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
I M + LSP++ +Y + G + K A + M +GI PD TY LI
Sbjct: 249 RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL--P 192
L + + EM +G++P Y L+ C KG+ +A+++ +E I L P
Sbjct: 309 RVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRP 368
Query: 193 DGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
+ P + R+ G G+++EA +++
Sbjct: 369 NMYKPVV----ERLMGA---GKIDEATQLVKN 393
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
K+ L P+ R+ S+V L + A N++ M G SP V TYN LI Y +
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
+E + +M ++GL+PD TY LI C+ G L +A E+ + + +L + Y +
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPV 374
Query: 131 ILTLCRKGRLSKAFDL 146
+ L G++ +A L
Sbjct: 375 VERLMGAGKIDEATQL 390
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 102/262 (38%), Gaps = 57/262 (21%)
Query: 60 LIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK- 118
L++GY + + A + +M + V ++ L+ + + KL +A + ++ K
Sbjct: 130 LLYGY--SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
GI PD TY +I LCRKG + +F E+ + G P + L+ + + F +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYT 238
+ D M +K +SP++ YN+R+ G + +AL ++ M G+SPDV
Sbjct: 248 DRIWDLMKSKN-----LSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVH--- 299
Query: 239 NVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNL 298
TY+ LI + NL
Sbjct: 300 ---------------------------------------------TYNALITAYRVDNNL 314
Query: 299 MDAYCLESEMSEYSYLTDDVIS 320
+ +EM E LT D ++
Sbjct: 315 EEVMKCYNEMKEKG-LTPDTVT 335
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 126/280 (45%), Gaps = 8/280 (2%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
+PS+AT+ L+ G D ++A+ I DMA +G D Y L+ G +
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVL 256
Query: 110 EMKAKMVHK--GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG--VSPHKYIYTRL 165
++ ++ K G + D YG L+ K +A + + E + E V Y +
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 166 MNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM 225
+ G+F +AL L D + + P ++ +L +N ++G C G+ EEA+ + R M
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM 376
Query: 226 ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTY 285
D SPD +S+ N++ C +A +L EM+EK + E Y L+D E
Sbjct: 377 GDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGK- 435
Query: 286 STLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRIN 325
I++ A M L ++ Y+ L D +I + +++
Sbjct: 436 ---IDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLD 472
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V K HN +++ V ++ T+N +++GYC +F+EA+ + R M SPD ++
Sbjct: 336 VKKEHNPPRHLAV-----NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNN 390
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
L+ C L +A ++ +M K + PD TYG+L+ T ++G++ + + M+
Sbjct: 391 LMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESN 450
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+ P+ +Y RL + G+ A D M++K + D Y + GR
Sbjct: 451 LRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDE------AYKFIMRALSEAGR 504
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCK 246
++E L I+ M D D V + ++ F K
Sbjct: 505 LDEMLKIVDEMLD----DDTVRVSEELQEFVK 532
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 123/285 (43%), Gaps = 49/285 (17%)
Query: 15 LDPDERN---LLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFK 71
+PD ++ LL LN+ +VD+ + +K GF P V Y +I+ +C+A +++
Sbjct: 228 FEPDIKSYTILLEGWGQELNLLRVDEVNREMKD---EGFEPDVVAYGIIINAHCKAKKYE 284
Query: 72 EAVGILRDMAKRGLSP-----------------------------------DVDTYYPLI 96
EA+ +M +R P + TY L+
Sbjct: 285 EAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALV 344
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
+C + ++ A++ +M KG+ P+A TY I++ L R R +A++++ M
Sbjct: 345 GAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCE 401
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P Y ++ +C K A+ + DEM KG L P + ++++ I C +++
Sbjct: 402 PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL-----PGMHMFSSLITALCHENKLD 456
Query: 217 EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMD 261
EA M D+G+ P ++ + + G K +L ++MD
Sbjct: 457 EACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMD 501
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 122/271 (45%), Gaps = 14/271 (5%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GF + +N ++ ++ +A + M K+ PD+ +Y L+ G+ Q L +
Sbjct: 192 GFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRV 251
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
E+ +M +G PD YGI+I C+ + +A F EM + P +I+ L+N
Sbjct: 252 DEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLING 311
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+ + + AL+ + + GF + +P+ YNA + C R+E+A + M
Sbjct: 312 LGSEKKLNDALEFFERSKSSGFPLE--APT---YNALVGAYCWSQRMEDAYKTVDEMRLK 366
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMD-EKGIPLYEDIYQSLLD--------DL 279
G+ P+ +Y ++ ++ +A+E+ M E + YE + + + +
Sbjct: 367 GVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKI 426
Query: 280 SDEVTYSTLINDFHAQGNLMDAYCLESEMSE 310
DE+ ++ H +L+ A C E+++ E
Sbjct: 427 WDEMKGKGVLPGMHMFSSLITALCHENKLDE 457
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 101/255 (39%), Gaps = 8/255 (3%)
Query: 28 SLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSP 87
+L V A + M + F P + +Y L+ G+ + + R+M G P
Sbjct: 206 TLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEP 265
Query: 88 DVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLF 147
DV Y +I C+ K +A +M + P + LI L + +L+ A + F
Sbjct: 266 DVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF 325
Query: 148 LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIH 207
G Y L+ YC+ A DEM K G+ P+ Y+ +H
Sbjct: 326 ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLK-----GVGPNARTYDIILH 380
Query: 208 GCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPL 267
+ R +EA + + M+ P V +Y +++ FC A ++ EM KG+
Sbjct: 381 HLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLP 437
Query: 268 YEDIYQSLLDDLSDE 282
++ SL+ L E
Sbjct: 438 GMHMFSSLITALCHE 452
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P+ R +H L+ + + +A+ + + M P+V+TY ++ +C +R A+ I
Sbjct: 370 PNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKI 426
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
+M +G+ P + + LI C KL +A E +M+ GI P + L TL
Sbjct: 427 WDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLD 486
Query: 137 KGRLSKAFDLFLEMLR 152
+GR K DL ++M R
Sbjct: 487 EGRKDKVTDLVVKMDR 502
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 6/231 (2%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
+D+ + MI GF+P+ T+N L+ Y +A FK+ V L +AKR DV +Y
Sbjct: 680 LDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKK-VNELFLLAKRHGVVDVISYNT 738
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
+I + + M G + Y L+ + ++ K + M +
Sbjct: 739 IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKST 798
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
P Y Y ++N Y +G + D+ E+ G PD L YN I + G
Sbjct: 799 SGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPD-----LCSYNTLIKAYGIGGM 853
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
VEEA+G+++ M + PD V+YTN++ + E ++A + L M + GI
Sbjct: 854 VEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 23 LSQVHSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILR 78
L ++LL+ Y Q++K ++LK M P TYN +I+ Y E +L+
Sbjct: 768 LEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLK 827
Query: 79 DMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKG 138
++ + GL PD+ +Y LI + G + +A + +M + I+PD TY L+ L R
Sbjct: 828 ELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRND 887
Query: 139 RLSKAFDLFLEMLREGV 155
+A L M + G+
Sbjct: 888 EFLEAIKWSLWMKQMGI 904
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 3/171 (1%)
Query: 29 LLNVY---QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
LL+VY ++ K N L + R V +YN +I Y + + +++M G
Sbjct: 705 LLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGF 764
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
S ++ Y L+ + + ++ K + +M PD TY I+I +G + + D
Sbjct: 765 SVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAD 824
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
+ E+ G+ P Y L+ Y G +A+ L EM + +PD ++
Sbjct: 825 VLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVT 875
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P + ++L + ++ D A L YM+ G P++ T ++L CR D+ +
Sbjct: 325 PMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKA 384
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
++ +G ++ +Y +I C+ G++ +++ +M +G+ PD Y LI C+
Sbjct: 385 YELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK 444
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
+ A L+ EM EG + Y L+ +GE ++L L D+M+ +G PD
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDE-- 502
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILR 223
IY + I G C ++E A+ + R
Sbjct: 503 ---TIYMSLIEGLCKETKIEAAMEVFR 526
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 98/247 (39%), Gaps = 12/247 (4%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G +P + Y I A R EA + + D D LI G A
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALI-GSVSAVDPDSA 346
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGR---LSKAFDLFLEMLREGVSPHKYIYTRL 165
E MV G LP T L LCR + L KA++L + +G Y+ +
Sbjct: 347 VEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYEL---LSSKGYFSELQSYSLM 403
Query: 166 MNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM 225
+++ C G ++ EM +G PD + +YNA I CC + A + M
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPD-----VSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 226 ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTY 285
G ++ +Y +I+ + GE ++ L +M E+GI E IY SL++ L E
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
Query: 286 STLINDF 292
+ F
Sbjct: 519 EAAMEVF 525
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 127/354 (35%), Gaps = 54/354 (15%)
Query: 60 LIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG 119
++H C+ R +A IL ++ PD Y + F TG L + + K G
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLG 288
Query: 120 ILPDADTYGILILTLCRKGRLSK----------------------------------AFD 145
+ P + Y IL L RL++ A +
Sbjct: 289 VAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVE 348
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNAR 205
+ M+ G P ++L C + + + + +KG+ + L Y+
Sbjct: 349 FLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSE-----LQSYSLM 403
Query: 206 IHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
I C GRV E+ L+ M GL+PDV Y +I+ CK A +L EM +G
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 266 PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRIN 325
+ + TY+ LI +G ++ L +M E D+ I I
Sbjct: 464 KM-------------NLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIE 510
Query: 326 GLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIEN-CSNNEFKTVVGLVKD 378
GL K+ T IEA + R + R + N CSN L+++
Sbjct: 511 GLCKE-TKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/401 (18%), Positives = 152/401 (37%), Gaps = 22/401 (5%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G+S +Y+ + + +F + + + + D Y LI K A
Sbjct: 77 GYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSA 136
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
F + + G D L+ L G A LF++M +GVS + + + +
Sbjct: 137 FWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGW 196
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+C E ++ L L DE+ +G +L+I +H C R +A IL + ++
Sbjct: 197 FCRSSETNQLLRLVDEVKKANLNINGSIIALLI----LHSLCKCSREMDAFYILEELRNI 252
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK---GIPLYEDIYQSLLDDL------ 279
PD ++Y + + F G +E ++ + +K G+ Y++ + DL
Sbjct: 253 DCKPDFMAYRVIAEAFVVTG---NLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRL 309
Query: 280 --SDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAK 337
+ EV + F +++DA + + ++ V L T +
Sbjct: 310 TEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLS 369
Query: 338 RSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLH 397
++L R D L + Y+ L +E ++ ++ G ++ A +M
Sbjct: 370 KNLCRHDKSDHL----IKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKK 425
Query: 398 GNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIG 438
P+ ++YN LI C+ + A ++ E G ++
Sbjct: 426 EGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMN 466
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 111/277 (40%), Gaps = 40/277 (14%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI---LRDMAKRGLSPDVDTY 92
+ A + + M G PS TY ++ + D+FKEA + L D K L PD Y
Sbjct: 191 NNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 250
Query: 93 YPLICGFCQTGKLGKAFEMKAKMVHKG--------------------------------I 120
+ +I + + G KA ++ + MV KG I
Sbjct: 251 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDI 310
Query: 121 LPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALD 180
PD +Y +LI R R +A +F EML GV P Y L++ + G +A
Sbjct: 311 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA-- 368
Query: 181 LPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNV 240
+ + K D I P L Y + +E A + + G P++V+Y +
Sbjct: 369 ---KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTL 425
Query: 241 IKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
IKG+ K + K E+ +M GI + I +++D
Sbjct: 426 IKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 14/261 (5%)
Query: 9 NNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRAD 68
+ K L PD++ ++ +KA + M+ +G S TYN L+
Sbjct: 237 DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFET 293
Query: 69 RFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYG 128
+KE I M + + PDV +Y LI + + + +A + +M+ G+ P Y
Sbjct: 294 SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 353
Query: 129 ILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINK 188
IL+ G + +A +F M R+ + P + YT +++ Y + A E K
Sbjct: 354 ILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA-----EKFFK 408
Query: 189 GFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI--KGFCK 246
DG P++V Y I G VE+ + + M G+ + T ++ G CK
Sbjct: 409 RIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK 468
Query: 247 -IGEPVKAFELKLEMDEKGIP 266
G + ++ EM+ G+P
Sbjct: 469 NFGSALGWYK---EMESCGVP 486
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A +L + G +P+V +Y L+ Y R + A I R M G P TY ++
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217
Query: 98 GFCQTGKLGKAFEMKAKMVHKG---ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
F + K +A E+ ++ + + PD Y ++I + G KA +F M+ +G
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 277
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
V Y LM++ E SK + D+M PD +S +L+I + +G R
Sbjct: 278 VPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLI---KAYGRA--RR 329
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
EEAL + M D G+ P +Y ++ F G
Sbjct: 330 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 11/221 (4%)
Query: 60 LIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG 119
LI Y + F A +L ++K G +P+V +Y L+ + + GK A + +M G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 120 ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHK---YIYTRLMNYYCFKGEFS 176
P A TY I++ T + +A ++F +L E SP K +Y ++ Y G +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 177 KALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVS 236
KA + M+ K G+ S V YN+ + V + I M + PDVVS
Sbjct: 265 KARKVFSSMVGK-----GVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVS 316
Query: 237 YTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
Y +IK + + +A + EM + G+ Y LLD
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLD 357
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 77/166 (46%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
++A ++ + M+ G P+ YN L+ + + ++A + + M + + PD+ +Y +
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
+ + + A + ++ G P+ TYG LI + + K +++ +M G+
Sbjct: 391 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
++ I T +M+ F AL EM + G PD + ++++
Sbjct: 451 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 496
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 32/315 (10%)
Query: 1 MMITASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNM-LKYMIVRGF--------- 50
+++ A C K + LL ++ L+ +D+A+N+ ++ +I GF
Sbjct: 291 ILVDALCSKRKF----QEATKLLDEI-KLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQ 345
Query: 51 --SP------SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQT 102
SP V YN ++ + + IL +M RG+SP+ T +C FC+
Sbjct: 346 KISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKA 405
Query: 103 GKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIY 162
G + +A E+ G P A +Y LI TLC + +A+D+ + G +
Sbjct: 406 GFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTF 465
Query: 163 TRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGIL 222
+ L N C+KG+ A +L + LP I+ + I C +G+VE+AL I
Sbjct: 466 STLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKI-----ISALCDVGKVEDALMIN 520
Query: 223 RGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI----PLYEDIYQSLLDD 278
G+ +T++I G + A +L + M EKG LY ++ Q + +
Sbjct: 521 ELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEM 580
Query: 279 LSDEVTYSTLINDFH 293
S E + T + F
Sbjct: 581 ESGEKNFFTTLLKFQ 595
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 111/277 (40%), Gaps = 40/277 (14%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI---LRDMAKRGLSPDVDTY 92
+ A + + M G PS TY ++ + D+FKEA + L D K L PD Y
Sbjct: 198 NNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 257
Query: 93 YPLICGFCQTGKLGKAFEMKAKMVHKG--------------------------------I 120
+ +I + + G KA ++ + MV KG I
Sbjct: 258 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDI 317
Query: 121 LPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALD 180
PD +Y +LI R R +A +F EML GV P Y L++ + G +A
Sbjct: 318 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA-- 375
Query: 181 LPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNV 240
+ + K D I P L Y + +E A + + G P++V+Y +
Sbjct: 376 ---KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTL 432
Query: 241 IKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
IKG+ K + K E+ +M GI + I +++D
Sbjct: 433 IKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 469
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 14/261 (5%)
Query: 9 NNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRAD 68
+ K L PD++ ++ +KA + M+ +G S TYN L+
Sbjct: 244 DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFET 300
Query: 69 RFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYG 128
+KE I M + + PDV +Y LI + + + +A + +M+ G+ P Y
Sbjct: 301 SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 360
Query: 129 ILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINK 188
IL+ G + +A +F M R+ + P + YT +++ Y + A E K
Sbjct: 361 ILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA-----EKFFK 415
Query: 189 GFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI--KGFCK 246
DG P++V Y I G VE+ + + M G+ + T ++ G CK
Sbjct: 416 RIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK 475
Query: 247 -IGEPVKAFELKLEMDEKGIP 266
G + ++ EM+ G+P
Sbjct: 476 NFGSALGWYK---EMESCGVP 493
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A +L + G +P+V +Y L+ Y R + A I R M G P TY ++
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 224
Query: 98 GFCQTGKLGKAFEMKAKMVHKG---ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
F + K +A E+ ++ + + PD Y ++I + G KA +F M+ +G
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 284
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
V Y LM++ E SK + D+M PD +S +L+I + +G R
Sbjct: 285 VPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLI---KAYGRA--RR 336
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
EEAL + M D G+ P +Y ++ F G
Sbjct: 337 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 11/221 (4%)
Query: 60 LIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG 119
LI Y + F A +L ++K G +P+V +Y L+ + + GK A + +M G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 120 ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHK---YIYTRLMNYYCFKGEFS 176
P A TY I++ T + +A ++F +L E SP K +Y ++ Y G +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 177 KALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVS 236
KA + M+ K G+ S V YN+ + +E I M + PDVVS
Sbjct: 272 KARKVFSSMVGK-----GVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVS 323
Query: 237 YTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
Y +IK + + +A + EM + G+ Y LLD
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLD 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 77/166 (46%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
++A ++ + M+ G P+ YN L+ + + ++A + + M + + PD+ +Y +
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
+ + + A + ++ G P+ TYG LI + + K +++ +M G+
Sbjct: 398 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
++ I T +M+ F AL EM + G PD + ++++
Sbjct: 458 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 503
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 148/367 (40%), Gaps = 61/367 (16%)
Query: 39 HNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICG 98
H KY + + N L+ C+ +R A + ++M +G PD D+Y L+ G
Sbjct: 137 HIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKG 196
Query: 99 FCQTGKLGKA----FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
FC GKL +A + M ++ KG D Y IL+ LC G + A ++ ++LR+G
Sbjct: 197 FCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKG 256
Query: 155 VSPHKYIY------------------TRLMNYYCFKGEF-------SKALDLPDE----- 184
+ K Y RL+ +G + A DL +E
Sbjct: 257 LKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVE 316
Query: 185 -------MINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGIL-RGMADMGLSPDVVS 236
M +KGF P+ IY A++ C G+++EA+ ++ + M P V
Sbjct: 317 GEEVLLAMRSKGF-----EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV 371
Query: 237 YTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQG 296
Y +IKG C G+ ++A +M ++ + +++E TY TL++ G
Sbjct: 372 YNVLIKGLCDDGKSMEAVGYLKKMSKQ------------VSCVANEETYQTLVDGLCRDG 419
Query: 297 NLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRT 356
++A + EM S+ + I GL EA L QD +P
Sbjct: 420 QFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQD--MVPESSV 477
Query: 357 YDTLIEN 363
+ L E+
Sbjct: 478 WKALAES 484
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFS-PSVATYNELIHGYCRADRFKEAVGILRDMAK 82
++V +L ++ +A +++ +++G P+V YN LI G C + EAVG L+ M+K
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK 397
Query: 83 R-GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLS 141
+ + +TY L+ G C+ G+ +A ++ +M+ K P +TY ++I LC R
Sbjct: 398 QVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRY 457
Query: 142 KAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
+A EM+ + + P ++ L CF
Sbjct: 458 EAVMWLEEMVSQDMVPESSVWKALAESVCF 487
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 7/255 (2%)
Query: 28 SLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRA--DRFKEAVGILRDMAKRGL 85
+L + +VD A +L ++ +G Y+ + G+ + + + +L + RG
Sbjct: 235 ALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGA 294
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P +D+Y + + GKL + E+ M KG P YG + LCR G+L +A
Sbjct: 295 IPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVS 354
Query: 146 LF-LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
+ EM++ P +Y L+ C G+ +A+ +M + + Y
Sbjct: 355 VINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQV----SCVANEETYQT 410
Query: 205 RIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
+ G C G+ EA ++ M P V +Y +IKG C + +A EM +
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQD 470
Query: 265 IPLYEDIYQSLLDDL 279
+ ++++L + +
Sbjct: 471 MVPESSVWKALAESV 485
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 148/367 (40%), Gaps = 61/367 (16%)
Query: 39 HNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICG 98
H KY + + N L+ C+ +R A + ++M +G PD D+Y L+ G
Sbjct: 137 HIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKG 196
Query: 99 FCQTGKLGKA----FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
FC GKL +A + M ++ KG D Y IL+ LC G + A ++ ++LR+G
Sbjct: 197 FCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKG 256
Query: 155 VSPHKYIY------------------TRLMNYYCFKGEF-------SKALDLPDE----- 184
+ K Y RL+ +G + A DL +E
Sbjct: 257 LKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVE 316
Query: 185 -------MINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGIL-RGMADMGLSPDVVS 236
M +KGF P+ IY A++ C G+++EA+ ++ + M P V
Sbjct: 317 GEEVLLAMRSKGF-----EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV 371
Query: 237 YTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQG 296
Y +IKG C G+ ++A +M ++ + +++E TY TL++ G
Sbjct: 372 YNVLIKGLCDDGKSMEAVGYLKKMSKQ------------VSCVANEETYQTLVDGLCRDG 419
Query: 297 NLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRT 356
++A + EM S+ + I GL EA L QD +P
Sbjct: 420 QFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQD--MVPESSV 477
Query: 357 YDTLIEN 363
+ L E+
Sbjct: 478 WKALAES 484
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 24 SQVHSLLNVYQVDKAHNMLKYMIVRGFS-PSVATYNELIHGYCRADRFKEAVGILRDMAK 82
++V +L ++ +A +++ +++G P+V YN LI G C + EAVG L+ M+K
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK 397
Query: 83 R-GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLS 141
+ + +TY L+ G C+ G+ +A ++ +M+ K P +TY ++I LC R
Sbjct: 398 QVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRY 457
Query: 142 KAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
+A EM+ + + P ++ L CF
Sbjct: 458 EAVMWLEEMVSQDMVPESSVWKALAESVCF 487
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 7/255 (2%)
Query: 28 SLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRA--DRFKEAVGILRDMAKRGL 85
+L + +VD A +L ++ +G Y+ + G+ + + + +L + RG
Sbjct: 235 ALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGA 294
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P +D+Y + + GKL + E+ M KG P YG + LCR G+L +A
Sbjct: 295 IPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVS 354
Query: 146 LF-LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
+ EM++ P +Y L+ C G+ +A+ +M + + Y
Sbjct: 355 VINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQV----SCVANEETYQT 410
Query: 205 RIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
+ G C G+ EA ++ M P V +Y +IKG C + +A EM +
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQD 470
Query: 265 IPLYEDIYQSLLDDL 279
+ ++++L + +
Sbjct: 471 MVPESSVWKALAESV 485
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 7/230 (3%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
+P+++T+N L+ + + A G+LR + + G++ D Y LI ++GK+ F
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
E+ +M + G+ + T+G LI R G+++KAF + + + V P + ++ L++
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
G +A D+ EM + I P + A + CC G+VE A + + + G
Sbjct: 583 GQSGAVDRAFDVLAEMKAE---THPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYG 639
Query: 230 L--SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
+ +P+V YT + K G+ A + +M EK + E + +L+D
Sbjct: 640 IRGTPEV--YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 7/225 (3%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+VD + M G ++ T+ LI G RA + +A G + + + PD +
Sbjct: 517 KVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFN 576
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKG--ILPDADTYGILILTLCRKGRLSKAFDLFLEML 151
LI Q+G + +AF++ A+M + I PD + G L+ C G++ +A +++ +
Sbjct: 577 ALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIH 636
Query: 152 REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCV 211
+ G+ +YT +N G++ A + +M K PD V ++A I
Sbjct: 637 KYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDE-----VFFSALIDVAGH 691
Query: 212 LGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
++EA GIL+ G+ +SY++++ C + KA EL
Sbjct: 692 AKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALEL 736
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 127/288 (44%), Gaps = 28/288 (9%)
Query: 6 SCKNNKAV---------ILDPDERNLLSQVHSLLNV----YQVDKAHNMLKYMIVRGFSP 52
+CK +AV IL+P +S + L++V ++ A +L+ + G +
Sbjct: 445 ACKKQRAVKEAFRFTKLILNP----TMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTA 500
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMK 112
Y LI ++ + + M+ G+ ++ T+ LI G + G++ KAF
Sbjct: 501 DCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY 560
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG--VSPHKYIYTRLMNYYC 170
+ K + PD + LI + G + +AFD+ EM E + P LM C
Sbjct: 561 GILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACC 620
Query: 171 FKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
G+ +A ++ +MI+K GI + +Y ++ C G + A I + M + +
Sbjct: 621 NAGQVERAKEVY-QMIHKY----GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDV 675
Query: 231 SPDVVSYTNVI--KGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
+PD V ++ +I G K+ + +AF + + +GI L Y SL+
Sbjct: 676 TPDEVFFSALIDVAGHAKMLD--EAFGILQDAKSQGIRLGTISYSSLM 721
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 9/236 (3%)
Query: 8 KNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRA 67
K+ K + PDE + + + +D+A +L+ +G +Y+ L+ C A
Sbjct: 668 KDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNA 727
Query: 68 DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTY 127
+K+A+ + + L P + T LI C+ +L KA E ++ G+ P+ TY
Sbjct: 728 KDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITY 787
Query: 128 GILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
+L+L RK +F L + +GVSP+ I R + C K F KA + +++
Sbjct: 788 SMLMLASERKDDFEVSFKLLSQAKGDGVSPN-LIMCRCITSLC-KRRFEKACAGGEPVVS 845
Query: 188 -KGFLPD----GISPSLVIYNARIHGCCVLGR--VEEALGILRGMADMGLSPDVVS 236
K P S +L++Y I G V V + LG L+ D L ++S
Sbjct: 846 FKSGRPQIENKWTSMALMVYRETISGGTVPTTEVVSQVLGCLQLPHDAALRDRLIS 901
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 138/347 (39%), Gaps = 37/347 (10%)
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
L+P + T+ L+ + + A + + G+ D Y LI + + G++ F
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 145 DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
++F +M GV + + + L++ G+ +KA + +K PD V++NA
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPD-----RVVFNA 577
Query: 205 RIHGCCVLGRVEEALGILRGMA--DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
I C G V+ A +L M + PD +S ++K C G+ +A E+ + +
Sbjct: 578 LISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHK 637
Query: 263 KGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSV 322
GI ++ Y+ +N G+ A + +M E D+V S
Sbjct: 638 YGIRGTPEV-------------YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSA 684
Query: 323 RINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMR 382
I+ + A ++ +++ + + +Y +L+ C N KD+
Sbjct: 685 LID-VAGHAKMLDEAFGILQDAKSQGIRLGTI-SYSSLMGACCN---------AKDW--- 730
Query: 383 GLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKE 429
KA + ++K+ +P + N LI C + KA + E
Sbjct: 731 ---KKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDE 774
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 134/328 (40%), Gaps = 25/328 (7%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+DPD ++ + + + N QV++A + + + G + Y ++ ++ + A
Sbjct: 605 IDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFAC 664
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
I +DM ++ ++PD + LI L +AF + +GI +Y L+
Sbjct: 665 SIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGAC 724
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C KA +L+ ++ + P L+ C + KA++ DE+ G P+
Sbjct: 725 CNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKI------- 247
I+ S+++ + E + +L G+SP+++ I CK
Sbjct: 785 ITYSMLMLASERK-----DDFEVSFKLLSQAKGDGVSPNLI-MCRCITSLCKRRFEKACA 838
Query: 248 -GEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLES 306
GEPV +F + G P E+ + S+ + E + ++ CL
Sbjct: 839 GGEPVVSF-------KSGRPQIENKWTSMALMVYRETISGGTVPTTEVVSQVLG--CL-- 887
Query: 307 EMSEYSYLTDDVISSVRINGLNKKATTI 334
++ + L D +IS++ IN ++K I
Sbjct: 888 QLPHDAALRDRLISTLGINISSQKQHNI 915
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 8/210 (3%)
Query: 58 NELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLG--KAFEMKAKM 115
N ++ + + + + M + GL PDV TY L+ G C K G KA E+ ++
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAG-CIKVKNGYPKAIELIGEL 228
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
H GI D+ YG ++ GR +A + +M EG SP+ Y Y+ L+N Y +KG++
Sbjct: 229 PHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
KA +L EM + G +P+ + + ++ I G G + + +L + G + + +
Sbjct: 289 KKADELMTEMKSIGLVPNKVMMTTLL-KVYIKG----GLFDRSRELLSELESAGYAENEM 343
Query: 236 SYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
Y ++ G K G+ +A + +M KG+
Sbjct: 344 PYCMLMDGLSKAGKLEEARSIFDDMKGKGV 373
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 118/241 (48%), Gaps = 5/241 (2%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
++A N ++ M V G SP++ Y+ L++ Y +K+A ++ +M GL P+ L
Sbjct: 254 EEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTL 313
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
+ + + G ++ E+ +++ G + Y +L+ L + G+L +A +F +M +GV
Sbjct: 314 LKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGV 373
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRV 215
Y + +++ C F +A +L + D LV+ N + C G +
Sbjct: 374 RSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCD-----LVMLNTMLCAYCRAGEM 428
Query: 216 EEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSL 275
E + +++ M + +SPD ++ +IK F K + A++ L+M KG L E++ SL
Sbjct: 429 ESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSL 488
Query: 276 L 276
+
Sbjct: 489 I 489
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
++++A ++ M +G + +I CR+ RFKEA + RD D+
Sbjct: 357 KLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLN 416
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
++C +C+ G++ M KM + + PD +T+ ILI ++ A+ L+M +
Sbjct: 417 TMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSK 476
Query: 154 G 154
G
Sbjct: 477 G 477
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 13/238 (5%)
Query: 40 NMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGF 99
N L Y +V V+ +N L+ + ++ V +L M +GL P + ++
Sbjct: 415 NNLSYELV------VSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVAC 468
Query: 100 CQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRL-SKAFDLFLEMLREGVSPH 158
+ + A ++ MV G P +YG L L+ KG+L +AF ++ M++ G+ P+
Sbjct: 469 SKASETTAAIQIFKAMVDNGEKPTVISYGAL-LSALEKGKLYDEAFRVWNHMIKVGIEPN 527
Query: 159 KYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEA 218
Y YT + + + +F+ L EM +K GI PS+V +NA I GC G A
Sbjct: 528 LYAYTTMASVLTGQQKFNLLDTLLKEMASK-----GIEPSVVTFNAVISGCARNGLSGVA 582
Query: 219 LGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL 276
M + P+ ++Y +I+ +P A+EL ++ +G+ L Y +++
Sbjct: 583 YEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 4 TASCKNNKAVILDPDERNLLSQVHSLLNVYQ----VDKAHNMLKYMIVRGFSPSVATYNE 59
TA+ + KA++ D E+ + +LL+ + D+A + +MI G P++ Y
Sbjct: 475 TAAIQIFKAMV-DNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTT 533
Query: 60 LIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG 119
+ +F +L++MA +G+ P V T+ +I G + G G A+E +M +
Sbjct: 534 MASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSEN 593
Query: 120 ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
+ P+ TY +LI L + A++L ++ EG+
Sbjct: 594 VEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGL 629
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 77/197 (39%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L P R+ + + + + A + K M+ G P+V +Y L+ + + EA
Sbjct: 454 LKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAF 513
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ M K G+ P++ Y + K + +M KGI P T+ +I
Sbjct: 514 RVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGC 573
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
R G A++ F M E V P++ Y L+ + A +L + N+G
Sbjct: 574 ARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSS 633
Query: 195 ISPSLVIYNARIHGCCV 211
V+ +A +G +
Sbjct: 634 KPYDAVVKSAETYGATI 650
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 11/210 (5%)
Query: 19 ERNLLSQVHSLLNVYQVDKAHNMLKYMIVR-----GFSPSVATYNELIHGYCRADRFKEA 73
+R++LS ++LL+ Y++ K ++++ + P + +YN LI C D EA
Sbjct: 141 KRSVLS-FNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEA 199
Query: 74 VGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
V +L ++ +GL PD+ T+ L+ G+ E+ AKMV K + D TY +L
Sbjct: 200 VALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLG 259
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
L + + + +LF E+ G+ P + + ++ +G+ +A E++ G+ PD
Sbjct: 260 LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILR 223
+ +L+ + C G E A+ + +
Sbjct: 320 KATFALL-----LPAMCKAGDFESAIELFK 344
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 81/177 (45%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ PD + + + +L + +A +L + +G P + T+N L+ +F+
Sbjct: 176 IKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGE 235
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
I M ++ ++ D+ TY + G K + + ++ G+ PD ++ +I
Sbjct: 236 EIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGS 295
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL 191
+G++ +A + E+++ G P K + L+ C G+F A++L E +K +L
Sbjct: 296 INEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 166/411 (40%), Gaps = 94/411 (22%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ P +++L S V+ N ++ K F ++A Y+ + A R
Sbjct: 37 ISPPQKSLTSLVNGERNPKRI--VEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVE 94
Query: 75 GIL------RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYG 128
IL RDM+K G + + + Y GK G FE K+ + +P+ D
Sbjct: 95 EILEEQKKYRDMSKEGFAARIISLY---------GKAG-MFENAQKVFEE--MPNRD--- 139
Query: 129 ILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINK 188
C++ LS F+ L R SK D+ +E+ N+
Sbjct: 140 ------CKRSVLS--FNALLSAYR----------------------LSKKFDVVEELFNE 169
Query: 189 GFLPDGIS--PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNV-----I 241
LP +S P +V YN I C + EA+ +L + + GL PD+V++ + +
Sbjct: 170 --LPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYL 227
Query: 242 KGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDA 301
KG ++GE + A +M EK + + Y + L L++E L+N F G L
Sbjct: 228 KGQFELGEEIWA-----KMVEKNVAIDIRTYNARLLGLANEAKSKELVNLF---GEL--- 276
Query: 302 YCLESEMSEYSYLTDDVIS-SVRINGLNKKATTIEAK---RSLVRWFYQDCLSIPAYRTY 357
+ S L DV S + I G + EA+ + +V+ Y+ P T+
Sbjct: 277 --------KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYR-----PDKATF 323
Query: 358 DTLIEN-CSNNEFKTVVGLVKD-FSMRGLAHKAAKAH--DKMLHGNYKPEG 404
L+ C +F++ + L K+ FS R L + D+++ G+ + E
Sbjct: 324 ALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEA 374
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 126/298 (42%), Gaps = 50/298 (16%)
Query: 147 FLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARI 206
+ +M +EG + R+++ Y G F A + +EM N+ S++ +NA +
Sbjct: 103 YRDMSKEGFA------ARIISLYGKAGMFENAQKVFEEMPNRD-----CKRSVLSFNALL 151
Query: 207 HGCCVLGR---VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
+ + VEE L G + + PD+VSY +IK C+ +A L E++ K
Sbjct: 152 SAYRLSKKFDVVEELFNELPG--KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENK 209
Query: 264 GIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVR 323
G+ D VT++TL+ + +G + ++M E + D + R
Sbjct: 210 GLK-------------PDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNAR 256
Query: 324 INGLNKKATTIEAKRSLVRWFYQDCLS--IPAYRTYDTLIENCSNNEFKTVVGLVKDFSM 381
+ GL +A + E LV F + S P +++ +I N
Sbjct: 257 LLGLANEAKSKE----LVNLFGELKASGLKPDVFSFNAMIRGSINE-------------- 298
Query: 382 RGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGR 439
G +A + +++ Y+P+ A + LL+ C+ G+ A +++KET +G+
Sbjct: 299 -GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQ 355
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
++ K M G P N +I Y + EA+ + ++MA G P+ TY L+
Sbjct: 207 VRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVK 266
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
G C+ G++G+ +M KG++P+ Y +LI +L + RL +A ++ +ML +SP
Sbjct: 267 GVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSP 326
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDE 184
Y ++ C G S+AL++ +E
Sbjct: 327 DMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 19/267 (7%)
Query: 27 HSLLNVYQVDKAHN----MLKYMIVRGFSPSVATYNELIHGYC-RADRFKEAVGILRDMA 81
H+++ K +N +++ +I SV YN +I C R F A + M
Sbjct: 112 HTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKML 171
Query: 82 KRGLS-PDVDTYYPLICGFCQT-GKLGKAF-------EMKAKMVHKGILPDADTYGILIL 132
+ S PD++TY L+ + KL + + +M G++PD ++I
Sbjct: 172 RSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIK 231
Query: 133 TLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLP 192
+ + +A +F EM G P+ Y Y+ L+ C KG + L EM KG +P
Sbjct: 232 AYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVP 291
Query: 193 DGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVK 252
+G Y I + R++EA+ ++ M LSPD+++Y V+ C+ G +
Sbjct: 292 NG-----SCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSE 346
Query: 253 AFELKLEMDEKGIPLYEDIYQSLLDDL 279
A E+ E ++ + E Y++L+D++
Sbjct: 347 ALEMVEEWKKRDPVMGERNYRTLMDEV 373
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 5/173 (2%)
Query: 3 ITASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIH 62
+T K+N + PD L + + +VD+A + K M + G P+ TY+ L+
Sbjct: 210 LTKQMKSNGVI---PDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVK 266
Query: 63 GYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILP 122
G C R + +G ++M +G+ P+ Y LIC +L +A E+ M+ + P
Sbjct: 267 GVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSP 326
Query: 123 DADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN--YYCFKG 173
D TY ++ LCR GR S+A ++ E + + Y LM+ Y+ KG
Sbjct: 327 DMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEVYFLNKG 379
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 5/225 (2%)
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMK 112
S YN++I +A++ + A + + G D TY L+ F G KAFE+
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 301
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
M L D TY ++I +L + GRL AF LF +M + P +++ L++
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
G ++ + EM +GF G PS ++ + I G+++ AL + M G P
Sbjct: 362 GRLDTSMKVYMEM--QGF---GHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRP 416
Query: 233 DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
+ YT +I+ K G+ A + +M++ G Y LL+
Sbjct: 417 NFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLE 461
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 132/313 (42%), Gaps = 15/313 (4%)
Query: 56 TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM 115
TYN L+ + +A I M K D TY +I ++G+L AF++ +M
Sbjct: 280 TYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM 339
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
+ + P + L+ ++ + GRL + +++EM G P ++ L++ Y G+
Sbjct: 340 KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKL 399
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
AL L DEM GF P+ +Y I G++E A+ + + M G P
Sbjct: 400 DTALRLWDEMKKSGF-----RPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPS 454
Query: 236 SYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEV---TYSTLINDF 292
+Y+ +++ G+ A ++ M G+ Y SLL L+++ ++ +
Sbjct: 455 TYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Query: 293 HAQGNLMDAYCLESEMSEY--SYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLS 350
A G +D C + Y D + +R G ++ I+ ++R ++ C+
Sbjct: 515 KAMGYSVDV-CASDVLMIYIKDASVDLALKWLRFMG----SSGIKTNNFIIRQLFESCMK 569
Query: 351 IPAYRTYDTLIEN 363
Y + L+E
Sbjct: 570 NGLYDSARPLLET 582
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ SL ++D A + + M R PS + ++ L+ +A R ++ + +M G
Sbjct: 320 IPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGH 379
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P + LI + + GKL A + +M G P+ Y ++I + + G+L A
Sbjct: 380 RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMT 439
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLP---DGISPSLVIY 202
+F +M + G P Y+ L+ + G+ A+ + + M N G P IS ++
Sbjct: 440 VFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLA 499
Query: 203 NARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
N R+ V+ A IL M MG S DV
Sbjct: 500 NKRL--------VDVAGKILLEMKAMGYSVDV 523
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 79/194 (40%), Gaps = 10/194 (5%)
Query: 40 NMLKYMIVRGFS--PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
+M YM ++GF PS + LI Y +A + A+ + +M K G P+ Y +I
Sbjct: 367 SMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIE 426
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
++GKL A + M G LP TY L+ G++ A ++ M G+ P
Sbjct: 427 SHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRP 486
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD-GISPSLVIYNARIHGCCVLGRVE 216
Y L+ K A + EM G+ D S L+IY V+
Sbjct: 487 GLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKD-------ASVD 539
Query: 217 EALGILRGMADMGL 230
AL LR M G+
Sbjct: 540 LALKWLRFMGSSGI 553
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P +S + S ++D A + M GF P+ Y +I + ++ + + A+ +
Sbjct: 381 PSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTV 440
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
+DM K G P TY L+ +G++ A ++ M + G+ P +Y L+ L
Sbjct: 441 FKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLAN 500
Query: 137 KGRLSKAFDLFLEMLREGVS 156
K + A + LEM G S
Sbjct: 501 KRLVDVAGKILLEMKAMGYS 520
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 6/196 (3%)
Query: 54 VATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKA 113
V +N L+ +C KEA I + R +PDV T L+ GF + G +
Sbjct: 176 VDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYH 234
Query: 114 KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKG 173
+MV +G P++ TYGI I C+K +A LF +M R I T L++
Sbjct: 235 EMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVAR 294
Query: 174 EFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPD 233
KA L DE+ +G PD + YNA + G V A+ +++ M + G+ PD
Sbjct: 295 NKIKARQLFDEISKRGLTPDCGA-----YNALMSSLMKCGDVSGAIKVMKEMEEKGIEPD 349
Query: 234 VVSYTNVIKGFCKIGE 249
V++ ++ G K E
Sbjct: 350 SVTFHSMFIGMMKSKE 365
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 95/248 (38%), Gaps = 65/248 (26%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM------------------------ 80
M+ RGF P+ TY I G+C+ F EA+ + DM
Sbjct: 236 MVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARN 295
Query: 81 -----------AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGI 129
+KRGL+PD Y L+ + G + A ++ +M KGI PD+ T+
Sbjct: 296 KIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHS 355
Query: 130 LILTLCRKGRLSKAF------DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPD 183
+ + + + SK F + + +M + P LM +C GE + LDL
Sbjct: 356 MFIGMMK----SKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWK 411
Query: 184 EMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
M+ KG+ P G + L+ C R +A S+ V +G
Sbjct: 412 YMLEKGYCPHGHALELLTT-----ALCARRRANDAFE--------------CSWQTVERG 452
Query: 244 FCKIGEPV 251
C + EPV
Sbjct: 453 RC-VSEPV 459
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
KA + + RG +P YN L+ + A+ ++++M ++G+ PD T++ +
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Query: 97 CGFCQTGKLG--KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
G ++ + G E KM + ++P T +L+ C G ++ DL+ ML +G
Sbjct: 358 IGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKG 417
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
PH + L C + + A + + + +G
Sbjct: 418 YCPHGHALELLTTALCARRRANDAFECSWQTVERG 452
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 16/252 (6%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
DE N+L + + ++ +A ++ + + R F+P V T N L+ G+ A
Sbjct: 177 DEFNIL--LRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFY 233
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
+M KRG P+ TY I GFC+ G+A + M D D ++ TL
Sbjct: 234 HEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRL----DFDITVQILTTLIHG 289
Query: 138 GRLS----KAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
++ KA LF E+ + G++P Y LM+ G+ S A+ + EM KG PD
Sbjct: 290 SGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPD 349
Query: 194 GIS-PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVK 252
++ S+ I + G E + M + L P + ++K FC GE
Sbjct: 350 SVTFHSMFIGMMKSKEFGFNGVCE----YYQKMKERSLVPKTPTIVMLMKLFCHNGEVNL 405
Query: 253 AFELKLEMDEKG 264
+L M EKG
Sbjct: 406 GLDLWKYMLEKG 417
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 141/385 (36%), Gaps = 45/385 (11%)
Query: 57 YNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLG------KAF- 109
+ + +H R F +A ++ ++ K P++ ++ + C+ K G +AF
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEVRKD--YPNLLSFKSMSILLCKIAKFGSYEETLEAFV 163
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
+M+ ++ K D + IL+ C + + +A +F E L +P L+ +
Sbjct: 164 KMEKEIFRKKF--GVDEFNILLRAFCTEREMKEARSIF-EKLHSRFNPDVKTMNILLLGF 220
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
G+ + EM+ +GF P+ ++ Y RI G C EAL + M +
Sbjct: 221 KEAGDVTATELFYHEMVKRGFKPNSVT-----YGIRIDGFCKKRNFGEALRLFEDMDRLD 275
Query: 230 LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLI 289
V T +I G +KA +L E+ ++G+ D Y+ L+
Sbjct: 276 FDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLT-------------PDCGAYNALM 322
Query: 290 NDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCL 349
+ G++ A + EM E D V G+ K F C
Sbjct: 323 SSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEF---------GFNGVC- 372
Query: 350 SIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNL 409
Y + E + T+V L+K F G + ML Y P G L
Sbjct: 373 -----EYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALEL 427
Query: 410 LIFDHCRHGNVHKAYDMYKETVHSG 434
L C + A++ +TV G
Sbjct: 428 LTTALCARRRANDAFECSWQTVERG 452
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 2/153 (1%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF--KE 72
L PD + + SL+ V A ++K M +G P T++ + G ++ F
Sbjct: 311 LTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNG 370
Query: 73 AVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILIL 132
+ M +R L P T L+ FC G++ ++ M+ KG P +L
Sbjct: 371 VCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTT 430
Query: 133 TLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRL 165
LC + R + AF+ + + G + +Y L
Sbjct: 431 ALCARRRANDAFECSWQTVERGRCVSEPVYRML 463
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 7/213 (3%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P++ TY L++ + R ++A I + + GL PDV Y L+ + + G A E+
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
+ M H G PD +Y I++ R G S A +F EM R G++P + L++ Y
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAY-- 436
Query: 172 KGEFSKALDLPD-EMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
SKA D+ E I K +G+ P + N+ ++ LG+ + IL M +
Sbjct: 437 ----SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPC 492
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
+ D+ +Y +I + K G + EL +E+ EK
Sbjct: 493 TADISTYNILINIYGKAGFLERIEELFVELKEK 525
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 143/360 (39%), Gaps = 33/360 (9%)
Query: 35 VDKAHNMLKYMIVRGFSPS---VATYNELIHGYC-RADRFKEAVGILRDMAKRGLSPDVD 90
+++A +L M SP V YN I G R +EA+ + + M + P +
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 91 TYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM 150
TY +I + + K ++++ +M P+ TY L+ R+G KA ++F ++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 151 LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCC 210
+G+ P Y+Y LM Y G A ++ M + G PD S YN +
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRAS-----YNIMVDAYG 402
Query: 211 VLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYED 270
G +A + M +G++P + S+ ++ + K + K + EM E G+
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 462
Query: 271 IYQSLLD----------------------DLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
+ S+L+ +D TY+ LIN + G L L E+
Sbjct: 463 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Query: 309 SEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNE 368
E ++ D V + RI ++K ++ C P T L+ CS+ E
Sbjct: 523 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC--APDGGTAKVLLSACSSEE 580
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 159/421 (37%), Gaps = 15/421 (3%)
Query: 33 YQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPD---V 89
+Q +A ++ ++ + P+ TY LI YC A + A +L +M +SP V
Sbjct: 191 FQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGV 250
Query: 90 DTYYPLICGFCQ-TGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFL 148
Y I G + G +A ++ +M P +TY ++I + + ++ L+
Sbjct: 251 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYC 310
Query: 149 EMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHG 208
EM P+ YT L+N + +G KA E I + DG+ P + +YNA +
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKA-----EEIFEQLQEDGLEPDVYVYNALMES 365
Query: 209 CCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLY 268
G A I M MG PD SY ++ + + G A + EM GI
Sbjct: 366 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 425
Query: 269 EDIYQSLLDDLS---DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD-DVISSVRI 324
+ LL S D ++ + G D + L S ++ Y L + +
Sbjct: 426 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 485
Query: 325 NGLNKKATT-IEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRG 383
N T I L+ + + + L E + T + +S +
Sbjct: 486 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKK 545
Query: 384 LAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPS 443
L K + ++M+ P+G +L+ V + + + T+H GV + P
Sbjct: 546 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLR-TMHKGVTVSSLVPK 604
Query: 444 F 444
Sbjct: 605 L 605
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 109/265 (41%), Gaps = 26/265 (9%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
F P V +N LI Y + ++KEA + + + P DTY LI +C G + +A
Sbjct: 173 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAE 232
Query: 110 EMKAKMVHKGILPDADTYGILILT------LCRKGRLSKAFDLFLEMLREGVSPHKYIYT 163
+ +M + + P T G+ + + RKG +A D+F M R+ P Y
Sbjct: 233 VVLVEMQNHHVSP--KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYN 290
Query: 164 RLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILR 223
++N Y + + L EM + P++ Y A ++ G E+A I
Sbjct: 291 LMINLYGKASKSYMSWKLYCEMRS-----HQCKPNICTYTALVNAFAREGLCEKAEEIFE 345
Query: 224 GMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEV 283
+ + GL PDV Y +++ + + G P A E+ M G D
Sbjct: 346 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCE-------------PDRA 392
Query: 284 TYSTLINDFHAQGNLMDAYCLESEM 308
+Y+ +++ + G DA + EM
Sbjct: 393 SYNIMVDAYGRAGLHSDAEAVFEEM 417
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 80 MAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
+ K PDV + LI + Q + +A + +++ +P DTY +LI C G
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYC-----FKGEFSKALDLPDEMINKGFLPDG 194
+ +A + +EM VSP K I + N Y KG +A+D+ M D
Sbjct: 228 IERAEVVLVEMQNHHVSP-KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKR-----DR 281
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADM---GLSPDVVSYTNVIKGFCKIGEPV 251
P+ YN I+ + G+ ++ + +M P++ +YT ++ F + G
Sbjct: 282 CKPTTETYNLMIN---LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCE 338
Query: 252 KAFELKLEMDEKGIPLYEDIYQSLLDDLS 280
KA E+ ++ E G+ +Y +L++ S
Sbjct: 339 KAEEIFEQLQEDGLEPDVYVYNALMESYS 367
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 7/213 (3%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P++ TY L++ + R ++A I + + GL PDV Y L+ + + G A E+
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
+ M H G PD +Y I++ R G S A +F EM R G++P + L++ Y
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAY-- 414
Query: 172 KGEFSKALDLPD-EMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGL 230
SKA D+ E I K +G+ P + N+ ++ LG+ + IL M +
Sbjct: 415 ----SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPC 470
Query: 231 SPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK 263
+ D+ +Y +I + K G + EL +E+ EK
Sbjct: 471 TADISTYNILINIYGKAGFLERIEELFVELKEK 503
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 143/360 (39%), Gaps = 33/360 (9%)
Query: 35 VDKAHNMLKYMIVRGFSPS---VATYNELIHGYC-RADRFKEAVGILRDMAKRGLSPDVD 90
+++A +L M SP V YN I G R +EA+ + + M + P +
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 91 TYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM 150
TY +I + + K ++++ +M P+ TY L+ R+G KA ++F ++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 151 LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCC 210
+G+ P Y+Y LM Y G A ++ M + G PD S YN +
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRAS-----YNIMVDAYG 380
Query: 211 VLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYED 270
G +A + M +G++P + S+ ++ + K + K + EM E G+
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Query: 271 IYQSLLD----------------------DLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
+ S+L+ +D TY+ LIN + G L L E+
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Query: 309 SEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNE 368
E ++ D V + RI ++K ++ C P T L+ CS+ E
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC--APDGGTAKVLLSACSSEE 558
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 159/421 (37%), Gaps = 15/421 (3%)
Query: 33 YQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPD---V 89
+Q +A ++ ++ + P+ TY LI YC A + A +L +M +SP V
Sbjct: 169 FQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGV 228
Query: 90 DTYYPLICGFCQ-TGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFL 148
Y I G + G +A ++ +M P +TY ++I + + ++ L+
Sbjct: 229 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYC 288
Query: 149 EMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHG 208
EM P+ YT L+N + +G KA E I + DG+ P + +YNA +
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKA-----EEIFEQLQEDGLEPDVYVYNALMES 343
Query: 209 CCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLY 268
G A I M MG PD SY ++ + + G A + EM GI
Sbjct: 344 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 403
Query: 269 EDIYQSLLDDLS---DEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTD-DVISSVRI 324
+ LL S D ++ + G D + L S ++ Y L + +
Sbjct: 404 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 463
Query: 325 NGLNKKATT-IEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRG 383
N T I L+ + + + L E + T + +S +
Sbjct: 464 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKK 523
Query: 384 LAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIGRAEPS 443
L K + ++M+ P+G +L+ V + + + T+H GV + P
Sbjct: 524 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLR-TMHKGVTVSSLVPK 582
Query: 444 F 444
Sbjct: 583 L 583
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 109/265 (41%), Gaps = 26/265 (9%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
F P V +N LI Y + ++KEA + + + P DTY LI +C G + +A
Sbjct: 151 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAE 210
Query: 110 EMKAKMVHKGILPDADTYGILILT------LCRKGRLSKAFDLFLEMLREGVSPHKYIYT 163
+ +M + + P T G+ + + RKG +A D+F M R+ P Y
Sbjct: 211 VVLVEMQNHHVSP--KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYN 268
Query: 164 RLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILR 223
++N Y + + L EM + P++ Y A ++ G E+A I
Sbjct: 269 LMINLYGKASKSYMSWKLYCEMRS-----HQCKPNICTYTALVNAFAREGLCEKAEEIFE 323
Query: 224 GMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEV 283
+ + GL PDV Y +++ + + G P A E+ M G D
Sbjct: 324 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCE-------------PDRA 370
Query: 284 TYSTLINDFHAQGNLMDAYCLESEM 308
+Y+ +++ + G DA + EM
Sbjct: 371 SYNIMVDAYGRAGLHSDAEAVFEEM 395
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 80 MAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR 139
+ K PDV + LI + Q + +A + +++ +P DTY +LI C G
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 140 LSKAFDLFLEMLREGVSPHKYIYTRLMNYYC-----FKGEFSKALDLPDEMINKGFLPDG 194
+ +A + +EM VSP K I + N Y KG +A+D+ M D
Sbjct: 206 IERAEVVLVEMQNHHVSP-KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKR-----DR 259
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
P+ YN I+ + + + M P++ +YT ++ F + G KA
Sbjct: 260 CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAE 319
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLS 280
E+ ++ E G+ +Y +L++ S
Sbjct: 320 EIFEQLQEDGLEPDVYVYNALMESYS 345
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 11/240 (4%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ +L + ++ K N M G+ +V T N + C+ +EA + + K +
Sbjct: 153 LKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL-KEFI 211
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
PD TY +I GFC G L +A ++ M+ +G D + ++ TL +K + +A
Sbjct: 212 KPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASK 271
Query: 146 LFLEML-REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
+F M+ + G Y ++++ C G A + DEM +G D ++ + +IY
Sbjct: 272 VFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIY-- 329
Query: 205 RIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
G V RV EA G++ G+ + PD+ Y +IKG KI +A E+ +M ++G
Sbjct: 330 ---GLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRG 382
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 174/384 (45%), Gaps = 33/384 (8%)
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMK 112
+V T+ ++ GY R+ + A + ++M +R +V ++ +I G+ Q+G++ KA E+
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELF 163
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
+M + I+ ++ ++ L ++GR+ +A +LF M R V +T +++
Sbjct: 164 DEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPRRDVVS----WTAMVDGLAKN 215
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
G+ +A L D M + +++ +NA I G R++EA + + M +
Sbjct: 216 GKVDEARRLFDCMPER---------NIISWNAMITGYAQNNRIDEADQLFQVMPER---- 262
Query: 233 DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVT---YSTLI 289
D S+ +I GF + E KA L M EK + + + +++ +E +S ++
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 290 NDFHAQGNLMDAYCLESEMSEYSYLTD-DVISSVRINGLNKKATTIEAKRSLVRWFYQDC 348
D + N+ + S S+ + L + I + +++K + + +L+ + +
Sbjct: 323 RDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTS--ALLNMYSKSG 380
Query: 349 LSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYN 408
I A + +D + + + ++ ++ G +A + +++M +KP Y
Sbjct: 381 ELIAARKMFDNGL--VCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYL 438
Query: 409 LLIFDHCRHGNVHKAYDMYKETVH 432
L+F G V K + +K+ V
Sbjct: 439 NLLFACSHAGLVEKGMEFFKDLVR 462
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 119/259 (45%), Gaps = 10/259 (3%)
Query: 26 VHSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM- 80
V ++N+Y + A + M R + ++N L++ + +F GI +++
Sbjct: 109 VARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELP 168
Query: 81 AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRL 140
K + PDV +Y LI G C G +A + ++ +KG+ PD T+ IL+ KG+
Sbjct: 169 GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 141 SKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
+ ++ M+ + V Y + + + + + L D++ KG + + P +
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKL--KG---NELKPDVF 283
Query: 201 IYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM 260
+ A I G G+++EA+ + + G P + +++ CK G+ A+EL E+
Sbjct: 284 TFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Query: 261 DEKGIPLYEDIYQSLLDDL 279
K + + E + Q ++D L
Sbjct: 344 FAKRLLVDEAVLQEVVDAL 362
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 5/195 (2%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P VA+YN LI G C F EAV ++ ++ +GL PD T+ L+ GK + ++
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
A+MV K + D +Y +L L + + + LF ++ + P + +T ++ +
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 172 KGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
+G+ +A+ E+ +G P ++N+ + C G +E A + + + L
Sbjct: 295 EGKLDEAITWYKEIEK-----NGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLL 349
Query: 232 PDVVSYTNVIKGFCK 246
D V+ K
Sbjct: 350 VDEAVLQEVVDALVK 364
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 129/300 (43%), Gaps = 42/300 (14%)
Query: 136 RKGRLSKAFDLFLEMLRE-----GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
R+ +K F+ E+L E +S ++ R++N Y G F A + DEM +
Sbjct: 79 RRLAAAKKFEWVEEILEEQNKYPNMSKEGFV-ARIINLYGRVGMFENAQKVFDEMPERNC 137
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM-ADMGLSPDVVSYTNVIKGFCKIGE 249
+S +NA ++ C + + GI + + + + PDV SY +IKG C G
Sbjct: 138 KRTALS-----FNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGS 192
Query: 250 PVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMS 309
+A L E++ KG+ D +T++ L+++ + +G + + + M
Sbjct: 193 FTEAVALIDEIENKGLK-------------PDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 310 EYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEF 369
E + D + R+ GL +E K ++ +S+ +D L N +
Sbjct: 240 EKNVKRDIRSYNARLLGL-----AMENKS-------EEMVSL-----FDKLKGNELKPDV 282
Query: 370 KTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKE 429
T ++K F G +A + ++ +P ++N L+ C+ G++ AY++ KE
Sbjct: 283 FTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKE 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 78/179 (43%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++PD + + + L +A ++ + +G P T+N L+H +F+E
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
I M ++ + D+ +Y + G K + + K+ + PD T+ +I
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
+G+L +A + E+ + G P K+++ L+ C G+ A +L E+ K L D
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVD 351
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 27 HSLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
+SL++VY +++KA+ ++ M +P V TY +I G + +A +L++M +
Sbjct: 250 NSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKE 309
Query: 83 RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK 142
G PDV Y I FC +LG A ++ +MV KG+ P+A TY + L L +
Sbjct: 310 YGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGR 369
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIY 202
+++L++ ML P+ L+ + + A+ L ++M+ KGF ++
Sbjct: 370 SWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF-----GSYSLVS 424
Query: 203 NARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNV 240
+ + C L +VEEA L M + G P VS+ +
Sbjct: 425 DVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 5/217 (2%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK 107
+G P V TYN LI YC+ ++A ++ M + +PDV TY +I G G+ K
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 108 AFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
A E+ +M G PD Y I C RL A L EM+++G+SP+ Y
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFR 359
Query: 168 YYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMAD 227
+ ++ +L M+ LP+ S +I + H +V+ A+ + M
Sbjct: 360 VLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRH-----EKVDMAMRLWEDMVV 414
Query: 228 MGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
G + ++ C + + +A + LEM EKG
Sbjct: 415 KGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKG 451
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 88 DVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLF 147
D + L+ CQ + A + + H+ PD T+ IL L +A F
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNIL---LSGWKSSEEAEAFF 234
Query: 148 LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIH 207
EM +G+ P Y L++ YC E KA L D+M + PD I+ Y I
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVIT-----YTTVIG 289
Query: 208 GCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
G ++G+ ++A +L+ M + G PDV +Y I+ FC A +L EM +KG+
Sbjct: 290 GLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGL 347
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+ R+M++RGL + TY LI G Q G A E+ +MV G+ PD TY IL+ LC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 136 RKGRLSKA---------FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMI 186
+ G+L KA +DLF + +GV P+ YT +++ +C KG +A L +M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 187 NKGFLPD 193
G LPD
Sbjct: 123 EDGPLPD 129
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 41 MLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFC 100
+ + M RG + TY LI G +A A I ++M G+ PD+ TY L+ G C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 101 QTGKLGKA---------FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML 151
+ GKL KA +++ + KG+ P+ TY +I C+KG +A+ LF +M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 152 REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLV 200
+G P Y L+ + G+ + + +L EM + F D + LV
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV--GILRD---- 79
+ L D A + K M+ G P + TYN L+ G C+ + ++A+ G + D
Sbjct: 23 IQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDL 82
Query: 80 ---MAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
++ +G+ P+V TY +I GFC+ G +A+ + KM G LPD+ TY LI R
Sbjct: 83 FCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLR 142
Query: 137 KGRLSKAFDLFLEM 150
G + + +L EM
Sbjct: 143 DGDKAASAELIKEM 156
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
E+ +M +G++ + TY LI L + G A ++F EM+ +GV P Y L++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 169 YCFKGEFSKAL------DLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGIL 222
C G+ KAL D D + G+ P++V Y I G C G EEA +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSL--KGVKPNVVTYTTMISGFCKKGFKEEAYTLF 118
Query: 223 RGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM 260
R M + G PD +Y +I+ + G+ + EL EM
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 27/182 (14%)
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYN 203
+LF EM + G+ + YT L+ G+ A ++ EM++ DG+ P ++ YN
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS-----DGVPPDIMTYN 55
Query: 204 ARIHGCC---------VLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
+ G C V G+VE+ + ++ G+ P+VV+YT +I GFCK G +A+
Sbjct: 56 ILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAY 115
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
L +M E G L D TY+TLI G+ + L EM +
Sbjct: 116 TLFRKMKEDG-------------PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFA 162
Query: 315 TD 316
D
Sbjct: 163 GD 164
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 13 VILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKE 72
++LD +N ++ L +V+ ++ + ++G P+V TY +I G+C+ +E
Sbjct: 56 ILLDGLCKN--GKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEE 113
Query: 73 AVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILIL 132
A + R M + G PD TY LI + G + E+ +M DA TYG L+
Sbjct: 114 AYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVT 172
Query: 133 TLCRKGRLSKAFDLFLEML 151
+ GRL K FLEML
Sbjct: 173 DMLHDGRLDKG---FLEML 188
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 8/196 (4%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
KA + K M R V YN +I + + + + R+M +RG P+V T+ +I
Sbjct: 242 KAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTII 301
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
C+ G++ A+ M +M +G PD+ TY L R + S+ LF M+R GV
Sbjct: 302 KLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVR 358
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVE 216
P Y LM + G L + M G PD + YNA I G ++
Sbjct: 359 PKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAA-----YNAVIDALIQKGMLD 413
Query: 217 EALGILRGMADMGLSP 232
A M + GLSP
Sbjct: 414 MAREYEEEMIERGLSP 429
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 12/231 (5%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
K K M G + + +Y+ + C++ + +AV + ++M R + DV Y +I
Sbjct: 207 KCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVI 266
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
+ + + +M +G P+ T+ +I LC GR+ A+ + EM + G
Sbjct: 267 RAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQ 326
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMIN--KGFLPDGISPSLVIYNARIHGCCVLGR 214
P + Y C FS+ L+ P E+++ + G+ P + Y + G
Sbjct: 327 PDS------ITYMCL---FSR-LEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGF 376
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
++ L + + M + G +PD +Y VI + G A E + EM E+G+
Sbjct: 377 LQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 119/299 (39%), Gaps = 30/299 (10%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNML--KYMIVRGFSPS-VATYNELIHGYCRADRFKEAV 74
DE + + V +L V +A + K +I GFS S +N ++ G+ + + +
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 209
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ M G++ D+ +Y + C++GK KA ++ +M + + D Y +I +
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ +F EM G P+ + ++ C G A + DEM +G PD
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 195 ISPSLVIYNARIHGCCVLGRVE---EALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPV 251
I+ C+ R+E E L + M G+ P + +Y +++ F + G
Sbjct: 330 ITY-----------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQ 378
Query: 252 KAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSE 310
+ M E G D D Y+ +I+ +G L A E EM E
Sbjct: 379 PVLYVWKTMKESG-------------DTPDSAAYNAVIDALIQKGMLDMAREYEEEMIE 424
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A+ ML M RG P TY L + R ++ E + + M + G+ P +DTY L+
Sbjct: 313 AYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMR 369
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
F + G L + M G PD+ Y +I L +KG L A + EM+ G+SP
Sbjct: 370 KFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Query: 158 HK 159
+
Sbjct: 430 RR 431
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V +A N++ M P+ +YN L+ R R +E+ IL M + G PD +YY
Sbjct: 266 VPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYF 325
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
++ TG+ GK ++ +M+ +G P+ Y LI LC R++ A LF +M R
Sbjct: 326 VVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSS 385
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
V + +Y L+ C G F K +L +E ++
Sbjct: 386 VGGYGQVYDLLIPKLCKGGNFEKGRELWEEALS 418
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 14/237 (5%)
Query: 54 VATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQ-------TGKLG 106
++ Y L+ G+ KEA +++DM G++PD+ + L+ C+ +G +
Sbjct: 208 LSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVP 267
Query: 107 KAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLM 166
+A + +M I P + +Y IL+ L R R+ ++ + +M R G P Y ++
Sbjct: 268 EALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVV 327
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA 226
G F K + DEMI +GF P+ Y I C + RV AL + M
Sbjct: 328 RVLYLTGRFGKGNQIVDEMIERGFRPER-----KFYYDLIGVLCGVERVNFALQLFEKMK 382
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEV 283
+ Y +I CK G K EL E + L I SLLD EV
Sbjct: 383 RSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCSI--SLLDPSVTEV 437
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 104/250 (41%), Gaps = 35/250 (14%)
Query: 48 RGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGK 107
R F + N +++G+C EA +D+ PDV +Y +I + GKLGK
Sbjct: 241 REFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGK 300
Query: 108 AFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
A E+ M PD +I LC K R+ +A ++F E+ +G P+ Y L+
Sbjct: 301 AMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLK 360
Query: 168 YYCFKGEFSKALDLPDEMINKG--FLPDGISPS-LVIYNARIHGC-CVLGRV-------- 215
+ C K +L +EM KG P+ ++ S L+ Y+ R VL R+
Sbjct: 361 HLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMT 420
Query: 216 -----------------EEALGILRGMADMGLSPDVVSYTNVIKGF---CKIGEPVKAFE 255
E+ I M GL PD +YT I G KIGE + F+
Sbjct: 421 SDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQ 480
Query: 256 LKLEMDEKGI 265
EM KG+
Sbjct: 481 ---EMMSKGM 487
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 152/370 (41%), Gaps = 67/370 (18%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+ ++ H + M R + TY L++ Y A + EAVG+ + G+ D+ ++
Sbjct: 158 RFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFH 217
Query: 94 PLIC----------------------------------GFCQTGKLGKAFEMKAKMVHKG 119
L+ G+C G + +A ++
Sbjct: 218 GLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASK 277
Query: 120 ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKAL 179
PD +YG +I L +KG+L KA +L+ M +P I +++ CFK +AL
Sbjct: 278 CRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEAL 337
Query: 180 DLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG--LSPDVVSY 237
++ E+ KG PD P++V YN+ + C + R E+ ++ M G SP+ V++
Sbjct: 338 EVFREISEKG--PD---PNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTF 392
Query: 238 TNVIKGFCKIGEPVKAFELKLE-MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQG 296
+ ++ K + K ++ LE M + + D+Y + L + +
Sbjct: 393 SYLL----KYSQRSKDVDIVLERMAKNKCEMTSDLYNLMF----------RLYVQWDKEE 438
Query: 297 NLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLS---IPA 353
+ + + SEM D ++RI+GL+ K EA ++Q+ +S +P
Sbjct: 439 KVREIW---SEMERSGLGPDQRTYTIRIHGLHTKGKIGEALS-----YFQEMMSKGMVPE 490
Query: 354 YRTYDTLIEN 363
RT L +N
Sbjct: 491 PRTEMLLNQN 500
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 12/220 (5%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD + + +++L ++ KA + + M +P V N +I C R EA+ +
Sbjct: 280 PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEV 339
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG--ILPDADTYGILILTL 134
R+++++G P+V TY L+ C+ + K +E+ +M KG P+ T+ L+
Sbjct: 340 FREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL--- 396
Query: 135 CRKGRLSKAFDLFLE-MLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
+ + SK D+ LE M + +Y + Y + K ++ EM G PD
Sbjct: 397 -KYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPD 455
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPD 233
+ Y RIHG G++ EAL + M G+ P+
Sbjct: 456 QRT-----YTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 31/242 (12%)
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMK 112
S YNE++ + RF+E + +M+KR + TY L+ + K+ +A +
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF 201
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
+ GI D + L++ LCR + A LF RE K + ++N +C
Sbjct: 202 ERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAM-NMILNGWCVL 260
Query: 173 GEFSKALDLPDEMINKGFLPDGIS------------------------------PSLVIY 202
G +A ++I PD +S P + I
Sbjct: 261 GNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKIC 320
Query: 203 NARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
N I C R+ EAL + R +++ G P+VV+Y +++K CKI K +EL EM+
Sbjct: 321 NNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMEL 380
Query: 263 KG 264
KG
Sbjct: 381 KG 382
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 8/243 (3%)
Query: 39 HNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICG 98
+N+L+ M S V YN + + ++ +++ + +M +RG+ PD T+ +I
Sbjct: 163 NNLLETM---KPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISC 219
Query: 99 FCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPH 158
Q G +A E KM G PD T +I R G + A L+ E
Sbjct: 220 ARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRID 279
Query: 159 KYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEA 218
++ L+ Y G + L++ +EM K G+ P+LVIYN I R +A
Sbjct: 280 AVTFSTLIRIYGVSGNYDGCLNIYEEM--KAL---GVKPNLVIYNRLIDSMGRAKRPWQA 334
Query: 219 LGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDD 278
I + + G +P+ +Y +++ + + A + EM EKG+ L +Y +LL
Sbjct: 335 KIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSM 394
Query: 279 LSD 281
+D
Sbjct: 395 CAD 397
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 19/280 (6%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
++K+ + M+ RG P AT+ +I + K AV M+ G PD T
Sbjct: 191 LEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAA 250
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
+I + + G + A + + + DA T+ LI G +++ EM G
Sbjct: 251 MIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
V P+ IY RL++ +A + ++I GF P+ + + ++ R +G G
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV---RAYGRARYG- 366
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPV-KAFELKLEMDEKGIPLYEDIYQ 273
++AL I R M + GLS V+ Y N + C V +AFE +++D+
Sbjct: 367 -DDALAIYREMKEKGLSLTVILY-NTLLSMCADNRYVDEAFE-----------IFQDMKN 413
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSY 313
D D T+S+LI + G + +A +M E +
Sbjct: 414 CETCD-PDSWTFSSLITVYACSGRVSEAEAALLQMREAGF 452
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 28 SLLNVYQV----DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
+L+ +Y V D N+ + M G P++ YN LI RA R +A I +D+
Sbjct: 285 TLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITN 344
Query: 84 GLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGR-LSK 142
G +P+ TY L+ + + A + +M KG+ Y L L++C R + +
Sbjct: 345 GFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTL-LSMCADNRYVDE 403
Query: 143 AFDLFLEMLR-EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
AF++F +M E P + ++ L+ Y G S+A +M GF P+L +
Sbjct: 404 AFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGF-----EPTLFV 458
Query: 202 YNARIHGCCVLGRVEEALGILRGMADMGLSPD 233
+ I +V++ + + ++G++PD
Sbjct: 459 LTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 9/249 (3%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
+PD + + + + VD A ++ + T++ LI Y + + +
Sbjct: 242 EPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLN 301
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
I +M G+ P++ Y LI + + +A + ++ G P+ TY L+
Sbjct: 302 IYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYG 361
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN-KGFLPDG 194
R A ++ EM +G+S +Y L++ +A ++ +M N + PD
Sbjct: 362 RARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDS 421
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCK---IGEPV 251
+ S +I ++ C GRV EA L M + G P + T+VI+ + K + + V
Sbjct: 422 WTFSSLI---TVYACS--GRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVV 476
Query: 252 KAFELKLEM 260
+ F+ LE+
Sbjct: 477 RTFDQVLEL 485
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 8/236 (3%)
Query: 31 NVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVD 90
N+Y +KA + M G P TY+ ++ Y ++ + +E + + G PD
Sbjct: 235 NLY--NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAI 292
Query: 91 TYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM 150
+ L F + G + +M + P+ Y L+ + R G+ A LF EM
Sbjct: 293 AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 352
Query: 151 LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCC 210
L G++P++ T L+ Y AL L +EM K + D ++YN ++ C
Sbjct: 353 LEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMD-----FILYNTLLNMCA 407
Query: 211 VLGRVEEALGILRGMAD-MGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
+G EEA + M + + PD SYT ++ + G+ KA EL EM + G+
Sbjct: 408 DIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGV 463
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 131/347 (37%), Gaps = 89/347 (25%)
Query: 104 KLGKAF----EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHK 159
+ G+ F EM +MV G+ D TY +I R +KA + F M + G+ P +
Sbjct: 197 RFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDE 256
Query: 160 YIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEAL 219
Y+ +++ Y G+ + L L + + G+ PD I+ S VLG++
Sbjct: 257 VTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFS------------VLGKMFGEA 304
Query: 220 G-------ILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIY 272
G +L+ M M + P+VV Y +++ + G+P A L EM E G+
Sbjct: 305 GDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT------ 358
Query: 273 QSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKAT 332
+E T + L+ + DA L EM + D ++
Sbjct: 359 -------PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFIL------------- 398
Query: 333 TIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAH 392
Y+TL+ C++ GL +A +
Sbjct: 399 ------------------------YNTLLNMCAD---------------IGLEEEAERLF 419
Query: 393 DKMLHG-NYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIG 438
+ M +P+ Y ++ + G KA ++++E + +GV++
Sbjct: 420 NDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN 466
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 193/507 (38%), Gaps = 131/507 (25%)
Query: 2 MITASCKNN----KA--VILDPDERNLLS---QVHSLLNVYQVDKAHNMLKYMIVRGFSP 52
MITA KN KA + D E+N +S + + + D+A + V+ F
Sbjct: 118 MITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK-FRD 176
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMK 112
SVA+ N L+ GY RA ++ EAV + + MA + +V + ++ G+C+ G++ A +
Sbjct: 177 SVAS-NVLLSGYLRAGKWNEAVRVFQGMAVK----EVVSCSSMVHGYCKMGRIVDARSLF 231
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM---------------------- 150
+M + ++ T+ +I + G F LFL M
Sbjct: 232 DRMTERNVI----TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 151 ---LREGVSPHK-----------YIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
REG H ++ LM+ Y G +A + M NK D +S
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVS 343
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFEL 256
+N+ I G ++ EA + M D+VS+T++IKGF GE K EL
Sbjct: 344 -----WNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVEL 394
Query: 257 KLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYC-----LESEMSEY 311
M EK D +T++ +I+ F + G +A C L+ E+
Sbjct: 395 FGMMPEK-----------------DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 312 SYLTDDVISSVR-----INGLNKKATTIE--------AKRSLVRWFYQ-----------D 347
SY V+S+ I GL ++ + SLV + +
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFS 497
Query: 348 CLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIY 407
C+S P +Y+T+I +S G KA K + +P G +
Sbjct: 498 CISEPNIVSYNTMISG---------------YSYNGFGKKALKLFSMLESSGKEPNGVTF 542
Query: 408 NLLIFDHCRH-GNVHKAYDMYKETVHS 433
L + C H G V + +K S
Sbjct: 543 -LALLSACVHVGYVDLGWKYFKSMKSS 568
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 124/294 (42%), Gaps = 50/294 (17%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
S ++ N I + R +EA I R M+ R + ++ +I + + GK+ KA++
Sbjct: 47 STAIFQCNSQISKHARNGNLQEAEAIFRQMSNR----SIVSWIAMISAYAENGKMSKAWQ 102
Query: 111 MKAKMVHKGILPDADTYGILILTLCR-KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
+ +M + +Y +I + + K L KA++LF ++ + Y ++ +
Sbjct: 103 VFDEMP----VRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVS----YATMITGF 154
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
G F +A L E K D ++ N + G G+ EA+ + +GMA
Sbjct: 155 VRAGRFDEAEFLYAETPVK--FRDSVAS-----NVLLSGYLRAGKWNEAVRVFQGMA--- 204
Query: 230 LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLI 289
+VVS ++++ G+CK+G V A L M E+ + +T++ +I
Sbjct: 205 -VKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV-----------------ITWTAMI 246
Query: 290 NDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRW 343
+ + G D + L M + V++N N A +A R VR+
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQE--------GDVKVNS-NTLAVMFKACRDFVRY 291
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 162/415 (39%), Gaps = 43/415 (10%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
MI +G P +TY LI Y + A+ L M+K G+ PD T ++ + + +
Sbjct: 213 MIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKARE 272
Query: 105 LGKAFEMKAKM------VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPH 158
KA E K + + TY +I T + G++ +A + F ML EG+ P
Sbjct: 273 FQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPT 332
Query: 159 KYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEA 218
+ +++ Y G+ + L M +P YN I +E A
Sbjct: 333 TVTFNTMIHIYGNNGQLGEVTSLMKTM------KLHCAPDTRTYNILISLHTKNNDIERA 386
Query: 219 LGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDD 278
+ M D GL PD VSY ++ F +A L EMD+ + + ++ QS L
Sbjct: 387 GAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEI-DEYTQSALTR 445
Query: 279 LSDEVTY----STLINDFHAQGNL--------MDAYCLESEMSEYSYLTDDVISSVRING 326
+ E + FH GN+ +DAY E YL++ +
Sbjct: 446 MYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAY------GERGYLSEAERVFICCQE 499
Query: 327 LNKKATTIE-----AKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSM 381
+NK+ T IE + + + C + +Y + C+ N LV+ +
Sbjct: 500 VNKR-TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNT------LVQILAS 552
Query: 382 RGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
+ HK +KM Y + Y +I + G ++ A ++YKE V +E
Sbjct: 553 ADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIE 607
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 110/272 (40%), Gaps = 32/272 (11%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
+KA + + M+ G +P TYN L+ AD + L M + G D Y +
Sbjct: 522 EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAV 581
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
I F + G+L A E+ +MV I PD YG+LI G + +A M G+
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMI---NKGFLPDGISPSLVI--YNAR----- 205
+ IY L+ Y G +A + +++ NK PD + + +I Y+ R
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRK 701
Query: 206 -------------------IHGCCVL---GRVEEALGILRGMADMGLSPDVVSYTNVIKG 243
C+ GR EEA I + M +M + D +SY +V+
Sbjct: 702 AEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGL 761
Query: 244 FCKIGEPVKAFELKLEMDEKGIPLYEDIYQSL 275
F G +A E EM GI + ++SL
Sbjct: 762 FALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 168/451 (37%), Gaps = 62/451 (13%)
Query: 17 PDER--NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
PD R N+L +H+ N +++A K M G P +Y L++ + +EA
Sbjct: 365 PDTRTYNILISLHTKNN--DIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAE 422
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA------FEMKAKMVHKGILPDADTYG 128
G++ +M + D T L + + L K+ F + M +G + D YG
Sbjct: 423 GLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYG 482
Query: 129 ILILTLCRKGRLSKAFDLFLEMLREGVSPHKYI-YTRLMNYYCFKGEFSKALDLPDEMIN 187
+G LS+A +F+ + V+ I Y ++ Y KA +L + M++
Sbjct: 483 -------ERGYLSEAERVFI--CCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMS 533
Query: 188 KGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKI 247
G PD + YN + + L M + G D + Y VI F K+
Sbjct: 534 YGVTPDKCT-----YNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKL 588
Query: 248 GEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESE 307
G+ A E+ EM E I D V Y LIN F GN+ A
Sbjct: 589 GQLNMAEEVYKEMVEYNIE-------------PDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 308 MSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDC------------------- 348
M E + VI + I L K ++ ++ R Q C
Sbjct: 636 MKEAGIPGNSVIYNSLIK-LYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYS 694
Query: 349 ---LSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGA 405
+ A +D++ + NEF T ++ + G +A + +M +
Sbjct: 695 ERSMVRKAEAIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPL 753
Query: 406 IYNLLIFDHCRHGNVHKAYDMYKETVHSGVE 436
YN ++ G +A + +KE V SG++
Sbjct: 754 SYNSVLGLFALDGRFKEAVETFKEMVSSGIQ 784
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 9/257 (3%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+ S + + Q++ A + K M+ P V Y LI+ + ++A+ + M + G+
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVH---KGILPDADTYGILILTLCRKGRLSK 142
+ Y LI + + G L +A + K++ K PD T +I + + K
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRK 701
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIY 202
A +F M + G +++ + ++ Y G F +A + +M L D +S Y
Sbjct: 702 AEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLS-----Y 755
Query: 203 NARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
N+ + + GR +EA+ + M G+ PD ++ ++ K+G KA E+ +
Sbjct: 756 NSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRK 815
Query: 263 KGIPLYEDIYQSLLDDL 279
K I +++ S L L
Sbjct: 816 KEIKRGLELWISTLSSL 832
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 12/270 (4%)
Query: 12 AVILDPDERNLLSQVHSLLNVYQVDKAHNMLKY----MIVRGFSPSVATYNELIHGYCRA 67
A +L+P+ + ++ L+N + H LK + + F+ S++ Y++LIH + +
Sbjct: 342 AELLEPNRVDWIA----LINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKE 397
Query: 68 DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTY 127
+ ++ IL+ M++ G+ PD+ T L+ + ++G +A E + G+ PD Y
Sbjct: 398 NHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIY 457
Query: 128 GILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
+IL G+ L EM + + + +Y L+ Y G+ + A + M
Sbjct: 458 EAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSM-- 515
Query: 188 KGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKI 247
+ DG S Y+ + G+V++A M +G PD N+++ +
Sbjct: 516 -QYASDG-PLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGE 573
Query: 248 GEPVKAFELKLEMDEKGIPLYEDIYQSLLD 277
KA L L++++ GI + Y L+D
Sbjct: 574 NSLDKALRLLLQLEKDGIEIGVITYTVLVD 603
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 96/246 (39%), Gaps = 43/246 (17%)
Query: 23 LSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK 82
L +H+ N ++ +LK M G P + T L+H Y ++ F+ A ++
Sbjct: 390 LIHIHAKEN--HIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKS 447
Query: 83 RGLSPDVDTYYPLICGFCQTGK--LGKAF--EMKAKMVHK------------GILPDA-- 124
GL PD Y +I G+ GK LG+ EM+AK + + DA
Sbjct: 448 YGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANG 507
Query: 125 ------------------DTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLM 166
+ Y + + + G++ KA F EM + G P L+
Sbjct: 508 AAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLV 567
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA 226
Y + KAL L ++ DGI ++ Y + LG +EEA +L ++
Sbjct: 568 RAYKGENSLDKALRLLLQLEK-----DGIEIGVITYTVLVDWMANLGLIEEAEQLLVKIS 622
Query: 227 DMGLSP 232
+G +P
Sbjct: 623 QLGEAP 628
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 57 YNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMV 116
Y+ LI Y +A F A+ M + G ++ L+ + K ++ ++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 117 HK--GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE 174
+ I+PD +YGILI + C G KA ++ +M +G+ +T +++ KGE
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 175 FSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG--RVEEALGILRGMADMGLSP 232
A +L +EM+ KG D + YN RI RV+E ++ M+ MGL P
Sbjct: 225 LEVADNLWNEMVKKGCELDNAA-----YNVRIMSAQKESPERVKE---LIEEMSSMGLKP 276
Query: 233 DVVSYTNVIKGFCKIG 248
D +SY ++ +C+ G
Sbjct: 277 DTISYNYLMTAYCERG 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 6/228 (2%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P +Y LI YC + ++A+ I+R M +G+ + ++ + G+L A +
Sbjct: 172 PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL 231
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
+MV KG D Y + I++ +K + +L EM G+ P Y LM YC
Sbjct: 232 WNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCE 290
Query: 172 KGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
+G +A + + +G + +P+ + I C E+ I + M
Sbjct: 291 RGMLDEA-----KKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKI 345
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
PD + +++ G + + A L + +K P + + ++ L ++L
Sbjct: 346 PDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEEL 393
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 38/273 (13%)
Query: 162 YTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGI 221
Y+ L+ Y F+ A+ ++M G S V +NA ++ C ++ +
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYG-----TPRSAVSFNALLNACLHSKNFDKVPQL 159
Query: 222 LRGMADM--GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
+ + PD +SY +IK +C G P KA E+ +M KG+ +
Sbjct: 160 FDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEV------------ 207
Query: 280 SDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRS 339
+ ++T+++ + +G L A L +EM + D+ +VRI K++ E +
Sbjct: 208 -TTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP--ERVKE 264
Query: 340 LVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGN 399
L+ L DT+ N L+ + RG+ +A K ++ + N
Sbjct: 265 LIEEMSSMGLKP------DTISYNY----------LMTAYCERGMLDEAKKVYEGLEGNN 308
Query: 400 YKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVH 432
P A + LIF C + Y ++K++V+
Sbjct: 309 CAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVY 341
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 1/159 (0%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR-GLSPDVDTY 92
Q+DK +LK M P V TYN ++ RA E +G+L M + +S ++ TY
Sbjct: 192 QIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITY 251
Query: 93 YPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLR 152
++ G + + + +MV GI PD +Y +I +L R G + ++ LF EM +
Sbjct: 252 NTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQ 311
Query: 153 EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL 191
+ P Y+Y L++ G+F AL L DE+ N L
Sbjct: 312 RQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTSSL 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 7/218 (3%)
Query: 45 MIVRGFSP-SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTG 103
+I+ G P S Y L + D +L+++++ L + +I F +T
Sbjct: 132 LILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETR 191
Query: 104 KLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE-GVSPHKYIY 162
++ K + +M PD TY ++ L R G +++ + M + VS + Y
Sbjct: 192 QIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITY 251
Query: 163 TRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGIL 222
++N F L + +EM+ G I P L+ Y A I G V+E+L +
Sbjct: 252 NTVLNGMRKACRFDMCLVIYNEMVQCG-----IEPDLLSYTAVIDSLGRSGNVKESLRLF 306
Query: 223 RGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM 260
M + P V Y +I K G+ A +L E+
Sbjct: 307 DEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 167/388 (43%), Gaps = 31/388 (7%)
Query: 54 VATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKA 113
V T + L+ Y R +E V IL +M G+ ++ ++ ++ GF ++G +A M
Sbjct: 182 VVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQ 241
Query: 114 KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKG 173
K+ H G PD T ++ ++ L+ + ++++G+ K + + +++ Y G
Sbjct: 242 KIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSG 301
Query: 174 EFSKALDLPD--EMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
+ L + EM+ G + NA I G G V++AL + + +
Sbjct: 302 HVYGIISLFNQFEMMEAG-----------VCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD--EVTYSTLI 289
+VVS+T++I G + G+ ++A EL EM G+ S+L + + +
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 290 NDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRW------ 343
+ F + +L+D + S L D RIN L++ + ++LV W
Sbjct: 411 HGFAVRVHLLD------NVHVGSALIDMYAKCGRIN-LSQIVFNMMPTKNLVCWNSLMNG 463
Query: 344 FYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNY--K 401
F + +++L+ +F + L+ GL + K + KM+ Y K
Sbjct: 464 FSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK-YFKMMSEEYGIK 522
Query: 402 PEGAIYNLLIFDHCRHGNVHKAYDMYKE 429
P Y+ ++ R G + +AYD+ KE
Sbjct: 523 PRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 137/320 (42%), Gaps = 36/320 (11%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL--ICGFCQTGKLGKAF 109
P++ +++ LI+ +A F +++G+ M GL PD L +C K+GK
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQI 138
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
+ + G+ DA G + R GR+ A +F M + V + L+ Y
Sbjct: 139 HCVSCV--SGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV----VTCSALLCAY 192
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
KG + + + EM + GI ++V +N + G G +EA+ + + + +G
Sbjct: 193 ARKGCLEEVVRILSEMES-----SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG 247
Query: 230 LSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLI 289
PD V+ ++V+ +G+ EM G ++ + + L L D+ S +I
Sbjct: 248 FCPDQVTVSSVLP---SVGDS--------EMLNMGRLIHGYVIKQGL--LKDKCVISAMI 294
Query: 290 NDFHAQGNLMDAYCL--ESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQD 347
+ + G++ L + EM E + + + I+ + NGL KA + F +
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMME-AGVCNAYITGLSRNGLVDKAL------EMFELFKEQ 347
Query: 348 CLSIPAYRTYDTLIENCSNN 367
+ + ++ ++I C+ N
Sbjct: 348 TMELNVV-SWTSIIAGCAQN 366
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 114/258 (44%), Gaps = 35/258 (13%)
Query: 58 NELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVH 117
N I G R +A+ + ++ + +V ++ +I G Q GK +A E+ +M
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 118 KGILPDADTYGILI-----LTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
G+ P+ T ++ + GR + F + + +L + ++ + L++ Y
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL-----DNVHVGSALIDMYAKC 436
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
G ++L + N +P + +LV +N+ ++G + G+ +E + I + L P
Sbjct: 437 GR----INLSQIVFN--MMP---TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487
Query: 233 DVVSYTNVIKGFCKIGEPVKAFE-LKLEMDEKGI-PLYEDIYQSLLDDLSDEVTYSTLIN 290
D +S+T+++ ++G + ++ K+ +E GI P E YS ++N
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEH--------------YSCMVN 533
Query: 291 DFHAQGNLMDAYCLESEM 308
G L +AY L EM
Sbjct: 534 LLGRAGKLQEAYDLIKEM 551
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 7/151 (4%)
Query: 21 NLLSQVH---SLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
+LL VH +L+++Y N+ + + + ++ +N L++G+ + KE + I
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK-GILPDADTYGILILTLCR 136
+ + L PD ++ L+ Q G + ++ M + GI P + Y ++ L R
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGR 537
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
G+L +A+DL EM E P ++ L+N
Sbjct: 538 AGKLQEAYDLIKEMPFE---PDSCVWGALLN 565
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 116/243 (47%), Gaps = 10/243 (4%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
+ + +L M RG P T+N L+HGY + + ++ L M +G+ P+ + +
Sbjct: 927 EVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVT 986
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGI-LPDADTYGILILTLCRKGRLSKAFDLFLEMLREG- 154
C G + KA ++ M KG L + ++ TL KG + KA D + R G
Sbjct: 987 SSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGM 1046
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
++P+ Y ++ +G A+ L + M+ +P S Y++ I+G +
Sbjct: 1047 MAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSS-----YDSVINGLLRYNQ 1098
Query: 215 VEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQS 274
+++A+ M ++GLSP + +++ ++ FC+ + +++ L M G ++++++
Sbjct: 1099 LDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKT 1158
Query: 275 LLD 277
++D
Sbjct: 1159 VID 1161
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 112/267 (41%), Gaps = 12/267 (4%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PDE VH + + L MI +G P+ + + C K+A+ +
Sbjct: 942 PDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDL 1001
Query: 77 LRDMAKRGL---SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
+ M +G S V T ++ G++ KA + ++ G++ A Y +I
Sbjct: 1002 WQVMESKGWNLGSSVVQT--KIVETLISKGEIPKAEDFLTRVTRNGMM--APNYDNIIKK 1057
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
L +G L A L ML+ P Y ++N + KA+D EM+
Sbjct: 1058 LSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVEL----- 1112
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
G+SPS+ ++ +H C +V E+ +++ M +G SP + VI F VKA
Sbjct: 1113 GLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKA 1172
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDLS 280
E+ M + G + + + SL+ ++S
Sbjct: 1173 SEMMEMMQKCGYEVDFETHWSLISNMS 1199
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 139/360 (38%), Gaps = 54/360 (15%)
Query: 60 LIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG 119
LI G A + +A LR M GLS Y + G+C+ K E+ MV K
Sbjct: 809 LIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKN 868
Query: 120 ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKG----EF 175
I+ +Y + +C + + A L +L +P I ++ +Y F+ E
Sbjct: 869 IICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEV 928
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
+K L EM +G LPD + +N +HG +L L M G+ P+
Sbjct: 929 NKVL---LEMQGRGVLPDETT-----FNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNR 980
Query: 236 SYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLL-------------DDLSDE 282
S V C G+ KA +L M+ KG L + Q+ + +D
Sbjct: 981 SLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTR 1040
Query: 283 VT--------YSTLINDFHAQGNLMDAYCLESEMSEYSYLT-----DDVISS-VRINGLN 328
VT Y +I +GNL A L + M + + D VI+ +R N L+
Sbjct: 1041 VTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLD 1100
Query: 329 KK------------ATTIEAKRSLVRWFYQDCLSIPAYRTYDTLI---ENCSNNEFKTVV 373
K + +I LV F + C + + R +++ E+ S FKTV+
Sbjct: 1101 KAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVI 1160
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
P + S ++ LL Q+DKA + M+ G SPS++T++ L+H +C A + E+ +
Sbjct: 1081 PGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERL 1140
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILI--LTL 134
++ M G SP + + +I F KA EM M G D +T+ LI ++
Sbjct: 1141 IKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNMSS 1200
Query: 135 CRKGRLSKAFDLFLEMLREG 154
++ + + A + FL L G
Sbjct: 1201 SKEKKTTTAGEGFLSRLLSG 1220
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 166/433 (38%), Gaps = 56/433 (12%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
AH+++K + G YN LI G C + A IL +M + P + + LI
Sbjct: 723 AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIP 782
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
C+ K G AF + + + + + LI L G++ A + ML G+S
Sbjct: 783 RLCRANKAGTAFNLAEQ------IDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSS 836
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
+ IY + YC + K ++ M+ K I S+ Y + C+ +
Sbjct: 837 YNKIYNVMFQGYCKGNNWMKVEEVLGLMVRK-----NIICSVKSYREYVRKMCLEPQSLS 891
Query: 218 ALG----ILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
A+ +L G ++ G V+ Y +I + ++ ++ LEM +G+
Sbjct: 892 AISLKEFLLLGESNPG---GVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGV-------- 940
Query: 274 SLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDD-----VISSVRINGLN 328
L DE T++ L++ + + + + S M ++ V SS+ NG
Sbjct: 941 -----LPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDV 995
Query: 329 KKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLI---ENCSNNEFKTVV-----------G 374
KKA + W S+ + +TLI E +F T V
Sbjct: 996 KKALDLWQVMESKGWNLGS--SVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDN 1053
Query: 375 LVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
++K S RG A + ML P + Y+ +I R+ + KA D + E
Sbjct: 1054 IIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEM---- 1109
Query: 435 VEIGRAEPSFTWP 447
VE+G + TW
Sbjct: 1110 VELGLSPSISTWS 1122
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 11/234 (4%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLS---PDVDTYY 93
KA + +M +G P + Y LI R R + A I D + ++D+
Sbjct: 201 KAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIG 260
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
+I C K+ +A + K+V G + ++ Y + + K E+ E
Sbjct: 261 KVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKYE 320
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
P ++ R+++ C + +A +E+ + GF D ++ + I CC G
Sbjct: 321 ---PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVT-----FGILIGWCCYEG 372
Query: 214 RVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPL 267
++ A+ L + G PDV SY ++ G + G + EM E G+ L
Sbjct: 373 DIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMML 426
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 66/153 (43%)
Query: 39 HNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICG 98
++L ++ + P V N ++H CR + A + ++ G D T+ LI
Sbjct: 308 EDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGW 367
Query: 99 FCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPH 158
C G + +A ++++ KG PD +Y ++ L RKG + EM G+
Sbjct: 368 CCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLS 427
Query: 159 KYIYTRLMNYYCFKGEFSKALDLPDEMINKGFL 191
+ ++ YC +F +A + ++M G +
Sbjct: 428 LSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLI 460
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 14/232 (6%)
Query: 50 FSPSVATYNELIHGYCRA-DRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
F V +N +++G+C EA I R+M ++P+ D+Y +I F + G L +
Sbjct: 254 FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDS 313
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ +M +G+ P + Y L+ L R+ +A L ++ EG+ P Y ++
Sbjct: 314 LRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRP 373
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
C G+ A ++ MI+ + +SP++ ++A + E+ L +L M
Sbjct: 374 LCEAGKLDVARNVLATMIS-----ENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKIS 424
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI----PLYEDIYQSLL 276
L P ++ ++ K +P A ++ EMD I LY Q LL
Sbjct: 425 DLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLL 476
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 112/231 (48%), Gaps = 9/231 (3%)
Query: 60 LIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG 119
++ Y A+ +A+ M K +P + + L+C C+ G + KA E + K
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKK 252
Query: 120 ILP-DADTYGILILTLCR-KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSK 177
+ P D + + +++ C +++A ++ EM ++P+K Y+ +++ + G
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 178 ALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSY 237
+L L DEM +G ++P + +YN+ ++ +EA+ +++ + + GL PD V+Y
Sbjct: 313 SLRLYDEMKKRG-----LAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTY 367
Query: 238 TNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
++I+ C+ G+ A + M + + D + + L+ ++ E T L
Sbjct: 368 NSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVL 418
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 12/245 (4%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V +A + + M +P+ +Y+ +I + + +++ + +M KRGL+P ++ Y
Sbjct: 275 VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNS 334
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
L+ + +A ++ K+ +G+ PD+ TY +I LC G+L A ++ M+ E
Sbjct: 335 LVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISEN 394
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
+SP + + F K L++ +M P + L++ G G+
Sbjct: 395 LSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLIL------GKLFKGK 444
Query: 215 V-EEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQ 273
E AL I M + + Y I+G G KA E+ EM KG + + Q
Sbjct: 445 QPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF-VGNPMLQ 503
Query: 274 SLLDD 278
LL++
Sbjct: 504 KLLEE 508
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 14/262 (5%)
Query: 20 RNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRD 79
R+++S ++++L D A L ++ VR S +I+ +A + + +
Sbjct: 58 RDIVSNIYNILKYSNWDSAQEQLPHLGVRWDS-------HIINRVLKAHPPMQKAWLFFN 110
Query: 80 MAK--RGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
A +G D TY ++ F + G++ + + M KG+L D TY LI +
Sbjct: 111 WAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSS 170
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
G + A L+ EM G P YT M G +A ++ EM L +SP
Sbjct: 171 GDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEM-----LRSRVSP 225
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELK 257
+ Y + G+ EEAL I M ++G+ PD + +I K GE +
Sbjct: 226 NCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVL 285
Query: 258 LEMDEKGIPLYEDIYQSLLDDL 279
+ M E G+ L I+ L+ L
Sbjct: 286 VYMKENGVVLRYPIFVEALETL 307
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 111/261 (42%), Gaps = 19/261 (7%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLS-PDVDTYYPLICGFCQTGKLGK 107
G S TYN +I GY +A F+E +L DM + G S PDV T +I + + K
Sbjct: 245 GVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRK 304
Query: 108 AFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
++ G+ PD T+ ILIL+ + G K + M + S Y ++
Sbjct: 305 MESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIE 364
Query: 168 YYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMAD 227
+ G K D+ +M +G P+ I+ Y + ++ G V + +LR + +
Sbjct: 365 TFGKAGRIEKMDDVFRKMKYQGVKPNSIT-----YCSLVNAYSKAGLVVKIDSVLRQIVN 419
Query: 228 MGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYST 287
+ D + +I + + G+ EL ++M+E+ D++T++T
Sbjct: 420 SDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCK-------------PDKITFAT 466
Query: 288 LINDFHAQGNLMDAYCLESEM 308
+I + A G LE +M
Sbjct: 467 MIKTYTAHGIFDAVQELEKQM 487
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGI 76
PD L S + S N + K + + G P + T+N LI + +A +K+ +
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343
Query: 77 LRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
+ M KR S TY +I F + G++ K ++ KM ++G+ P++ TY L+ +
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G + K + +++ V + ++N Y G+ + +L +M + PD I+
Sbjct: 404 AGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKIT 463
Query: 197 PSLVIYNARIHG 208
+ +I HG
Sbjct: 464 FATMIKTYTAHG 475
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 73/151 (48%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
K +++ +M R FS + TYN +I + +A R ++ + R M +G+ P+ TY L+
Sbjct: 339 KMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLV 398
Query: 97 CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVS 156
+ + G + K + ++V+ ++ D + +I + G L+ +L+++M
Sbjct: 399 NAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCK 458
Query: 157 PHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
P K + ++ Y G F +L +MI+
Sbjct: 459 PDKITFATMIKTYTAHGIFDAVQELEKQMIS 489
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 116/318 (36%), Gaps = 53/318 (16%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
KAV+ DE ++ S L ++ + + + + P TY +L +
Sbjct: 109 KAVLEALDEAIKENRWQSALKIFNLLRKQHW--------YEPRCKTYTKLFKVLGNCKQP 160
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVH-KGILPDADTYGI 129
+A + M GL P +D Y LI + ++ L KAF M PD T+ +
Sbjct: 161 DQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTV 220
Query: 130 LILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
LI C+ GR + LEM GV Y +++ Y G F + + +MI G
Sbjct: 221 LISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDG 280
Query: 190 -FLPD------------------------------GISPSLVIYNARIHGCCVLGRVEEA 218
LPD G+ P + +N I G ++
Sbjct: 281 DSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKM 340
Query: 219 LGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDD 278
++ M S V+Y VI+ F K G K ++ +M +G+
Sbjct: 341 CSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVK------------ 388
Query: 279 LSDEVTYSTLINDFHAQG 296
+ +TY +L+N + G
Sbjct: 389 -PNSITYCSLVNAYSKAG 405
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 120/315 (38%), Gaps = 35/315 (11%)
Query: 122 PDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDL 181
P TY L L + +A LF ML EG+ P +YT L++ Y KA
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 182 PDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI 241
+ M + P + + I CC LGR + I+ M+ +G+ V+Y +I
Sbjct: 202 LEYMKS----VSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTII 257
Query: 242 KGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDA 301
G+ K G FE EM+ + ED D L D T +++I + GN +
Sbjct: 258 DGYGKAG----MFE---EMESVLADMIED-----GDSLPDVCTLNSIIGSY---GNGRNM 302
Query: 302 YCLESEMSEYSYL-TDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTL 360
+ES S + + I++ I L+ + K V F + TY+ +
Sbjct: 303 RKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIV 362
Query: 361 IENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNV 420
IE F G K KM + KP Y L+ + + G V
Sbjct: 363 IET---------------FGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLV 407
Query: 421 HKAYDMYKETVHSGV 435
K + ++ V+S V
Sbjct: 408 VKIDSVLRQIVNSDV 422
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%)
Query: 73 AVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILIL 132
A+ L M + G+ P V Y LI G+ +G+L KA EM +M KG LP+ TY +I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 133 TLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
LC G +A L EM G +P+ +Y+ L+ Y G+ S+A + EM+ KG
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
K V +DP + + + + ++DKA M + M V+G P+V TYN +I G C A F
Sbjct: 716 KEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEF 775
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG 119
+EA +L++M RG +P+ Y L+ + GKL +A ++ +MV KG
Sbjct: 776 REACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 38 AHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLIC 97
A L +M G PSV Y LI GY + +A + R+M +G P+V TY +I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
G C G+ +A + +M +G P+ Y L+ L + G+LS+A + EM+++G
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYV 827
Query: 158 HKYIYTRLMNY 168
H + +++M Y
Sbjct: 828 H--LVSKMMKY 836
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 150 MLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGC 209
M G+ P YT L++ Y GE KA ++ EM KG LP+ + YN+ I G
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPN-----VFTYNSMIRGL 769
Query: 210 CVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKG 264
C+ G EA +L+ M G +P+ V Y+ ++ K G+ +A ++ EM +KG
Sbjct: 770 CMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
GI PS++ Y I G V G +++A + R M G P+V +Y ++I+G C GE +A
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
L EM+ +G + V YSTL+ G L +A + EM
Sbjct: 779 CWLLKEMESRGCN-------------PNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 143/334 (42%), Gaps = 45/334 (13%)
Query: 28 SLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSP 87
+L+++Y K + K + R +V ++ ++ GY + R +EAV I DM + G+ P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 88 DVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLF 147
D T I L + + K + G++ L+ + G + + LF
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 148 LEM-LREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARI 206
EM +R+ VS +T +++ Y G + + L D+M+ G PDG++ + V I
Sbjct: 430 NEMNVRDAVS-----WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGV-----I 479
Query: 207 HGCCVLGRVEEALGILRGM-ADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGI 265
C G VE+ + M ++ G+ P + Y+ +I F + G +A G+
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFI-----NGM 534
Query: 266 PLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNL-MDAYCLESEM-------SEYSYLTD- 316
P D + ++TL++ +GNL + + ES + + Y+ L+
Sbjct: 535 PF-----------PPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSI 583
Query: 317 -------DVISSVRINGLNKKATTIEAKRSLVRW 343
D ++ +R G+ +K E +S ++W
Sbjct: 584 YASKGKWDSVAQLR-RGMREKNVKKEPGQSWIKW 616
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 128/324 (39%), Gaps = 33/324 (10%)
Query: 57 YNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMV 116
YN L+ G ++A+ + R M K D ++ +I G Q G +A E +M
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 117 HKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFS 176
+G+ D +G ++ G +++ + ++R H Y+ + L++ YC
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 177 KALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVS 236
A + D M K ++V + A + G GR EEA+ I M G+ PD +
Sbjct: 323 YAKTVFDRMKQK---------NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 237 YTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSL---------LDD--------- 278
I + + + + G+ Y + SL +DD
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 279 LSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKR 338
+ D V+++ +++ + G ++ L +M ++ D V + I+ + +A +E +
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS-RAGLVEKGQ 492
Query: 339 SLVRWFYQDCLSIPAYRTYDTLIE 362
+ + +P+ Y +I+
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMID 516
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 113/254 (44%), Gaps = 25/254 (9%)
Query: 27 HSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLS 86
+++++ Y + K+ + + R P++ ++N L+ Y +A E + R
Sbjct: 45 NNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR--- 101
Query: 87 PDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR----KGRLSK 142
D T+ LI G+ +G +G A + M+ A+ + ++T+ + G +S
Sbjct: 102 -DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD---FSANLTRVTLMTMLKLSSSNGHVSL 157
Query: 143 AFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIY 202
+ ++++ G + + + L+ Y G S A + + ++ + V+Y
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR---------NTVMY 208
Query: 203 NARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDE 262
N+ + G G +E+AL + RGM D VS+ +IKG + G +A E EM
Sbjct: 209 NSLMGGLLACGMIEDALQLFRGM-----EKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 263 KGIPLYEDIYQSLL 276
+G+ + + + S+L
Sbjct: 264 QGLKMDQYPFGSVL 277
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 98/200 (49%), Gaps = 6/200 (3%)
Query: 34 QVDKAHNMLKYM-IVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTY 92
++ +A +++ M +V+G ++ T+ +I + F+E +L+ M K + D+D+Y
Sbjct: 225 EITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSY 284
Query: 93 YPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLR 152
LI GF GK+ +A + M K + ++ Y +++ R G + K +L+ EM
Sbjct: 285 KVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSS 344
Query: 153 EGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVL 212
GV+P+K Y LMN C G+ +A+ +E+ F D +Y+ C +
Sbjct: 345 RGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDE-----EMYSTLSEECYRV 399
Query: 213 GRVEEALGILRGMADMGLSP 232
G ++++L ++ M G P
Sbjct: 400 GMIDKSLEVVAEMIRDGFIP 419
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 11 KAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRF 70
++V+LD D +L + + +V++A ++ M + YN +++GY R
Sbjct: 275 ESVMLDLDSYKVL--IDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLV 332
Query: 71 KEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGIL 130
++ + + +M+ RG++P+ DTY+ L+ G C+ GK+ +A ++ D + Y L
Sbjct: 333 EKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTL 392
Query: 131 ILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRL 165
R G + K+ ++ EM+R+G P I RL
Sbjct: 393 SEECYRVGMIDKSLEVVAEMIRDGFIPGATICERL 427
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 12/275 (4%)
Query: 8 KNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSP-SVATYNELIHGYCR 66
KNN+ I DE+ + +L Q++ A + M+ G +V + ++ C
Sbjct: 166 KNNEVKI---DEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCC 222
Query: 67 ADRFKEAVGILRDMA-KRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHK-GILPDA 124
A ++ +M +G+ ++ T+ +I G C + ++ K++ K ++ D
Sbjct: 223 NGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEELDLVLKLMEKESVMLDL 281
Query: 125 DTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDE 184
D+Y +LI G++ +A L L M + + Y+Y +MN Y G K ++L E
Sbjct: 282 DSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSE 341
Query: 185 MINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGF 244
M ++G ++P+ Y ++G C G+V EA+ L + D Y+ + +
Sbjct: 342 MSSRG-----VTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEEC 396
Query: 245 CKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
++G K+ E+ EM G I + L D L
Sbjct: 397 YRVGMIDKSLEVVAEMIRDGFIPGATICERLADSL 431
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 133/331 (40%), Gaps = 36/331 (10%)
Query: 92 YYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML 151
+ +I + GK + E+ M + + D T + +L L R ++ A D F M+
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 152 REGVSPHK-YIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCC 210
G+ Y T ++ C GE ++A +L +EM L G+ ++V + + I GCC
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEM----GLVKGVKANIVTFKSMI-GCC 256
Query: 211 V-LGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYE 269
V EE +L+ M + D+ SY +I GF G+ +A L L M +K + +
Sbjct: 257 VKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRV-- 314
Query: 270 DIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNK 329
+ Y+ ++N + G + L SEMS + V +NGL K
Sbjct: 315 -----------ESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCK 363
Query: 330 KATTIEAKRSL----VRWFYQDCLSIPAYRTYDTLIENC-----SNNEFKTVVGLVKDFS 380
EA L V F D Y TL E C + + V +++D
Sbjct: 364 AGKVCEAMSFLNELRVNEFEID------EEMYSTLSEECYRVGMIDKSLEVVAEMIRDGF 417
Query: 381 MRGLAHKAAKAHDKMLHGNYKPEGAIYNLLI 411
+ G A + D + N K + +++
Sbjct: 418 IPG-ATICERLADSLFEVNRKEAQMLITIVV 447
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 7/225 (3%)
Query: 57 YNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMV 116
+N +I Y +F E V + M + D T + + ++ A + + MV
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 117 HKGI-LPDADTYGILILTLCRKGRLSKAFDLFLEM-LREGVSPHKYIYTRLMNYYCFKGE 174
GI + + +++ LC G +++A +L EM L +GV + + ++ + +
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261
Query: 175 FSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
F + LDL +++ K + + L Y I G G+VEEA ++ M D L +
Sbjct: 262 FEE-LDLVLKLMEK----ESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVES 316
Query: 235 VSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDL 279
Y ++ G+ + G K EL EM +G+ +D Y L++ L
Sbjct: 317 YLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGL 361
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 5/248 (2%)
Query: 35 VDKAHNMLKYMIVRG-FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
VD+A + ++++ F+PS TY L G +A R +A +LR+M +G + D Y
Sbjct: 232 VDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYN 291
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI G+ G KA E ++ K + D + KG +A + + +L +
Sbjct: 292 NLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDK 351
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG 213
H L+ + G+ +A L +EM++ P+ +S + ++ C +G
Sbjct: 352 KFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMG 411
Query: 214 RVEEALGILRGMADMGLSP----DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYE 269
EA+ + + S D + Y N++ FC+ G +A E + +P
Sbjct: 412 EFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADA 471
Query: 270 DIYQSLLD 277
+++++D
Sbjct: 472 PSHRAMID 479
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 158/399 (39%), Gaps = 51/399 (12%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRD-MAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
P+V +YN++I+ +C EA+ + R +A +P TY L G Q G++G A
Sbjct: 214 PNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAAS 273
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYC 170
+ +M+ KG D+ Y LI G KA + F E+ + + M Y+
Sbjct: 274 LLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWF 333
Query: 171 FKGEFSKALDLPDEMINKGFL---PDGISPSLVIYNARIHGCCVLGRVEEALGILRGMAD 227
KG +A++ +++K F P G N + G+ +EA + M D
Sbjct: 334 EKGNDKEAMESYRSLLDKKFRMHPPTG--------NVLLEVFLKFGKKDEAWALFNEMLD 385
Query: 228 MGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYST 287
P+++S + G + E K E ++ + +VT
Sbjct: 386 NHAPPNILSVNSDTVGIM-VNECFKMGEFSEAIN-------------TFKKVGSKVTSKP 431
Query: 288 LINDFHAQGNLMDAYCLESEMSEYS-YLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQ 346
+ D+ N++ +C + ++E + + V S+ + + R+++ + +
Sbjct: 432 FVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADA--------PSHRAMIDAYLK 483
Query: 347 DCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMR--------GLAHKAAKAHDKMLHG 398
A + D +++ + +V DF R G ++A+ KM
Sbjct: 484 AERIDDAVKMLDRMVD--------VNLRVVADFGARVFGELIKNGKLTESAEVLTKMGER 535
Query: 399 NYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEI 437
KP+ +IY++++ C + +A D+ E + V +
Sbjct: 536 EPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGV 574
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 37 KAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI 96
+ +L M RG + T+N LI+ C+ R +EA+ + M + G PD +TY LI
Sbjct: 305 EVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLI 364
Query: 97 CGFCQTGKLGKAFEMKAKMVHKG---ILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
Q ++G+ EM KM G +L + YG L + LC RL A +F M
Sbjct: 365 RSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKI-LCGIERLEHAMSVFKSMKAN 423
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
G P Y LM C + ++A L E KG +SP
Sbjct: 424 GCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGI---AVSP 464
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 11/266 (4%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L D+ +L V L A M+K F P + LI G+C A++ EA
Sbjct: 207 LKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIF-PDENICDLLISGWCIAEKLDEAT 265
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAK-------MVHKGILPDADTY 127
+ +M++ G Y ++ C+ + F+++ + M +G+ + +T+
Sbjct: 266 RLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETF 325
Query: 128 GILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMIN 187
+LI LC+ R +A LF M G P Y L+ + ++ D+M +
Sbjct: 326 NVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKS 385
Query: 188 KGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKI 247
G+ G + Y + C + R+E A+ + + M G P + +Y ++ C
Sbjct: 386 AGY---GELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCAN 442
Query: 248 GEPVKAFELKLEMDEKGIPLYEDIYQ 273
+ +A L E +KGI + Y+
Sbjct: 443 NQLTRANGLYKEAAKKGIAVSPKEYR 468
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 127/343 (37%), Gaps = 53/343 (15%)
Query: 117 HKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE-GVSPHKYIYTRLMNYYCFKGEF 175
+KGI T I L R GR + D F +M + G+ K T ++ C KG
Sbjct: 169 YKGIA-GGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHA 227
Query: 176 SKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
S A + N+ F P I + I G C+ +++EA + M+ G
Sbjct: 228 SIAEKMVKNTANEIF------PDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTK 281
Query: 236 SYTNVIKGFCKIGEPVKAFELK-------LEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
+Y ++ CK+ F+L+ LEM+ +G+P + T++ L
Sbjct: 282 AYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVP-------------RNTETFNVL 328
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWF---Y 345
IN+ +A L M E+ D V I L + A E + + Y
Sbjct: 329 INNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGY 388
Query: 346 QDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGA 405
+ L+ Y + K + G+ + L H A M KP
Sbjct: 389 GELLNKKEYYGF-----------LKILCGIER------LEH-AMSVFKSMKANGCKPGIK 430
Query: 406 IYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIG----RAEPSF 444
Y+LL+ C + + +A +YKE G+ + R +P F
Sbjct: 431 TYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRF 473
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 5/204 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
++PD + L +++++ M + P+ A++ +I G+ + ++F E
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
++R M + G+ V TY +I C+ K +A + ++ + P++ TY +LI
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
C + L +A +LF M+ G P Y L++ C G+F AL L E + K ++
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWV--- 354
Query: 195 ISPSLVIYNARIHGCCVLGRVEEA 218
PS + ++G +V+EA
Sbjct: 355 --PSFSVMKWLVNGLASRSKVDEA 376
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 8/230 (3%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G P + TYN +I C + + I+ +M ++ + P ++ +I GF + K +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
++ M G+ TY I+I LC++ + ++A L ++ + P+ Y+ L++
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+C + +A++L + M+ G+ PD Y IH C G E AL + R +
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDS-----ECYFTLIHCLCKGGDFETALILCRESMEK 351
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEK---GIPLYEDIYQSL 275
P ++ G + +A EL + EK + L+ ++ +L
Sbjct: 352 NWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVEAAL 401
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+ D+ +++ M G VATYN +I C+ + EA ++ + + P+ TY
Sbjct: 232 KFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYS 291
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
LI GFC L +A + MV G PD++ Y LI LC+ G A L E + +
Sbjct: 292 LLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEK 351
Query: 154 GVSPHKYIYTRLMNYYCFKGEFSKALDL 181
P + L+N + + +A +L
Sbjct: 352 NWVPSFSVMKWLVNGLASRSKVDEAKEL 379
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 121/303 (39%), Gaps = 64/303 (21%)
Query: 39 HNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR-GLSPDVDTYYPLIC 97
N+ +Y I R +V + N L+ A +KEA + +M K G+ PD++TY +I
Sbjct: 135 RNLEQYEIPR----TVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIR 190
Query: 98 GFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSP 157
C++G ++ + A+M K I P A ++G++I ++ + FD
Sbjct: 191 VLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEK----FD------------ 234
Query: 158 HKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEE 217
E K + + DE G+ + YN I C + E
Sbjct: 235 ----------------EVRKVMRMMDEF--------GVHVGVATYNIMIQCLCKRKKSAE 270
Query: 218 ALGILRGMADMGLSPDVVSYTNVIKGFCK---IGEPVKAFELKLEMDEKGIPLYEDIYQS 274
A ++ G+ + P+ V+Y+ +I GFC + E + FE+ + K
Sbjct: 271 AKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYK----------- 319
Query: 275 LLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTI 334
D Y TLI+ G+ A L E E +++ + +NGL ++
Sbjct: 320 -----PDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVD 374
Query: 335 EAK 337
EAK
Sbjct: 375 EAK 377
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 60 LIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICG------FCQTGKLGKAFEMKA 113
LI Y RA F A+ + +M K G V ++ L+ F + +L F +
Sbjct: 108 LIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQR- 166
Query: 114 KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKG 173
+ I PD +YG+LI + C G+ KA ++ +M +GV +T ++ G
Sbjct: 167 ---YNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNG 223
Query: 174 EFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLG--RVEEALGILRGMADMGLS 231
+A L EM+NKG D +YN R+ RV+E ++ M+ +GL
Sbjct: 224 LVDEAESLWIEMVNKGCDLDN-----TVYNVRLMNAAKESPERVKE---LMEEMSSVGLK 275
Query: 232 PDVVSYTNVIKGFCKIG---EPVKAFE 255
PD VSY ++ +C G E K +E
Sbjct: 276 PDTVSYNYLMTAYCVKGMMSEAKKVYE 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
+P +Y LI YC + + ++A+ I+RDM +G+ + + ++ + G + +A
Sbjct: 169 NITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEA 228
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ +MV+KG D Y + ++ ++ + +L EM G+ P Y LM
Sbjct: 229 ESLWIEMVNKGCDLDNTVYNVRLMNAAKESP-ERVKELMEEMSSVGLKPDTVSYNYLMTA 287
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
YC KG S+A + + +G P+ + I C+ G ++ L + + A +
Sbjct: 288 YCVKGMMSEA-----KKVYEGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIV 338
Query: 229 GLSPDVVSYTNVIKGFCK 246
PD + ++ +G K
Sbjct: 339 HKIPDFKTCKHLTEGLVK 356
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 120/300 (40%), Gaps = 48/300 (16%)
Query: 128 GILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGE-FSKALDLPDEMI 186
LI + R A +F EM + G +P + + C + F + L DE
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLG-TPRTVVSFNALLAACLHSDLFERVPQLFDEFP 164
Query: 187 NKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCK 246
+ + I+P + Y I C G+ E+A+ I+R M G+ ++++T ++ K
Sbjct: 165 QRY---NNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYK 221
Query: 247 IGEPVKAFELKLEMDEKGIPLYEDIYQSLL-----------DDLSDEVTYSTLINDFHAQ 295
G +A L +EM KG L +Y L +L +E++ L D +
Sbjct: 222 NGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSY 281
Query: 296 GNLMDAYCLESEMSE----YSYLTDDVISSVR-------INGLNKKATTIEAKRSLVRWF 344
LM AYC++ MSE Y L ++ R INGL + T+ K ++V
Sbjct: 282 NYLMTAYCVKGMMSEAKKVYEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVH-- 339
Query: 345 YQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSM---RGLAHKAAKAHDKMLHGNYK 401
IP ++T L E GLVK+ M RG+A K L +K
Sbjct: 340 -----KIPDFKTCKHLTE-----------GLVKNNRMEDARGVARIVKKKFPPRLVTEWK 383
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 105/248 (42%), Gaps = 35/248 (14%)
Query: 52 PSVATYNELIHGYCRADRFKEAV-GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFE 110
PS T N L+ R + E V IL + G+ + T+ LI C+ G++ A E
Sbjct: 141 PSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATE 200
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDL--FLEMLREG-VSPHKYIYTRLMN 167
+ M ++ D Y L+ ++C K + S FD+ +LE LR+ SP YT +M
Sbjct: 201 LVRYMSQDSVIVDPRLYSRLLSSVC-KHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMR 259
Query: 168 YYCFKGEFSKALDLPDEMINKGFLPDGI------------------------------SP 197
+ G + + + ++M PD + +P
Sbjct: 260 FLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAP 319
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELK 257
+ YN I+G C +E AL ++ M +G P+VV+Y +IK K G+ +A L
Sbjct: 320 DVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLW 379
Query: 258 LEMDEKGI 265
EM+ G+
Sbjct: 380 KEMETNGV 387
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 133/319 (41%), Gaps = 28/319 (8%)
Query: 26 VHSLLNVYQVDKAHNMLKYM-IVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
+ +L Q++ ++L ++ + F + + ++I Y + R +EA+ + +
Sbjct: 79 IKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFR 138
Query: 85 LSPDVDTYYPLICGFCQTGK-LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
P T L+ + + L E+ K G+ + T+GILI LCR G + A
Sbjct: 139 CVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCA 198
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD----GISPSL 199
+L M ++ V +Y+RL++ C K + S D+ G+L D SP L
Sbjct: 199 TELVRYMSQDSVIVDPRLYSRLLSSVC-KHKDSSCFDVI------GYLEDLRKTRFSPGL 251
Query: 200 VIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLE 259
Y + GR +E + +L M + PD+V YT V++G + KA +L
Sbjct: 252 RDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKL--- 308
Query: 260 MDEKGIPLYE-DIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDV 318
DE + D+Y TY+ IN Q ++ A + S M++ + V
Sbjct: 309 FDELLLLGLAPDVY-----------TYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVV 357
Query: 319 ISSVRINGLNKKATTIEAK 337
++ I L K AK
Sbjct: 358 TYNILIKALVKAGDLSRAK 376
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 25 QVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
+V S+LN + D+ P + Y ++ G + + +A + ++ G
Sbjct: 269 EVVSVLNQMKCDRVE------------PDLVCYTIVLQGVIADEDYPKADKLFDELLLLG 316
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
L+PDV TY I G C+ + A +M + M G P+ TY ILI L + G LS+A
Sbjct: 317 LAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAK 376
Query: 145 DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
L+ EM GV+ + + + +++ Y +++ + + G L + + ++ + ++
Sbjct: 377 TLWKEMETNGVNRNSHTFDIMISAY---------IEVDEVVCAHGLLEEAFNMNVFVKSS 427
Query: 205 RIHGC----CVLGRVEEALGIL 222
RI C G +++A+ +L
Sbjct: 428 RIEEVISRLCEKGLMDQAVELL 449
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 5/207 (2%)
Query: 50 FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAF 109
FSP + Y ++ R KE V +L M + PD+ Y ++ G KA
Sbjct: 247 FSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKAD 306
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
++ +++ G+ PD TY + I LC++ + A + M + G P+ Y L+
Sbjct: 307 KLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKAL 366
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
G+ S+A L EM +G++ + ++ I + V A G+L +M
Sbjct: 367 VKAGDLSRAKTLWKEMET-----NGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMN 421
Query: 230 LSPDVVSYTNVIKGFCKIGEPVKAFEL 256
+ VI C+ G +A EL
Sbjct: 422 VFVKSSRIEEVISRLCEKGLMDQAVEL 448
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 18/239 (7%)
Query: 57 YNELIHGYCRADRFKEAVGILRDM-AKRGLS--PDVDTYYPLICGFCQTGK--------L 105
YN +I + +A + AV I R M + L P + TY+ L G +
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 106 GKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM-LREGVSPHKYIYTR 164
+ +MV GI PD L+ ++ A +F +M + P+ + Y
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
L++ C +G A +L EM KGF+P+G S YN+ ++ + G +++A+ L
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKS-----YNSLVNAFALSGEIDDAVKCLWE 384
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEV 283
M + G D +SY ++ C+ G+ +A L LEM + + D Y L++ L ++
Sbjct: 385 MIENGRVVDFISYRTLVDESCRKGKYDEATRL-LEMLREKQLVDRDSYDKLVNVLHKDL 442
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 52 PSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEM 111
P+ TY+ LIHG C R A +L +M +G P+ +Y L+ F +G++ A +
Sbjct: 322 PNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKC 381
Query: 112 KAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN 167
+M+ G + D +Y L+ CRKG+ +A L LEMLRE + Y +L+N
Sbjct: 382 LWEMIENGRVVDFISYRTLVDESCRKGKYDEATRL-LEMLREKQLVDRDSYDKLVN 436
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 17/206 (8%)
Query: 37 KAHNMLKYMIVRG---FSPSVATYNELI--------HGYCRADRFKEAVGILRDMAKRGL 85
+A N+ ++M+ P++ TY+ L + Y + + R M G+
Sbjct: 225 RAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGI 284
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKM-VHKGILPDADTYGILILTLCRKGRLSKAF 144
PDV L+ G+ + + A + +M V P++ TY LI LC +GR A
Sbjct: 285 EPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINAR 344
Query: 145 DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
+L EM +G P+ Y L+N + GE A+ EMI G + D IS Y
Sbjct: 345 ELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFIS-----YRT 399
Query: 205 RIHGCCVLGRVEEALGILRGMADMGL 230
+ C G+ +EA +L + + L
Sbjct: 400 LVDESCRKGKYDEATRLLEMLREKQL 425
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Query: 27 HSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAK-RGL 85
+S +N ++ ++ + M+ G P V N L+ GY + +A+ I M+
Sbjct: 261 NSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDC 320
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P+ TY LI G C G+ A E+ ++M KG +P+ +Y L+ G + A
Sbjct: 321 EPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVK 380
Query: 146 LFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
EM+ G Y L++ C KG++ +A L EM+ + L D
Sbjct: 381 CLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL-EMLREKQLVD 427
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 90 DTYYPLICGFCQTGKLGKAFEMKAKMVHKGIL---PDADTYGILILTLCRKGR------- 139
+ Y +I F + GKL +A + MV L P TY IL L +G
Sbjct: 208 NLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHV 267
Query: 140 -LSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPS 198
+ LF +M+ G+ P + L+ Y + AL + +M + D P+
Sbjct: 268 YMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQM---SVVYD-CEPN 323
Query: 199 LVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKL 258
Y+ IHG C GR A +L M G P+ SY +++ F GE A +
Sbjct: 324 SFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLW 383
Query: 259 EMDEKGIPLYEDIYQSLLDD 278
EM E G + Y++L+D+
Sbjct: 384 EMIENGRVVDFISYRTLVDE 403
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 114/291 (39%), Gaps = 65/291 (22%)
Query: 56 TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM 115
TY +I + A +K A+ + DM G++P+ T+ LI G + +A + +M
Sbjct: 376 TYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEM 435
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYI-------------- 161
+ G P++ + IL+ + +AF LF V+ Y
Sbjct: 436 LASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNI 495
Query: 162 -----------------YTRLMNYYCFK--------------GEFSKALDLPDEMINKGF 190
Y + +CFK ++ + +L DEM + G
Sbjct: 496 LKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMDEMKSLG- 554
Query: 191 LPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEP 250
+SP+ + ++ I C G VE A+ ILR M G PDVV+YT IK C +
Sbjct: 555 ----LSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIK-ICAENKC 609
Query: 251 VK-AFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMD 300
+K AF L EM I + VTY+TL+ G+L++
Sbjct: 610 LKLAFSLFEEMRRYQIK-------------PNWVTYNTLLKARSKYGSLLE 647
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 96/237 (40%), Gaps = 10/237 (4%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDM-AKRGLSPDVDTY 92
Q +KAH + + MI G + Y L+ Y R+ RF A +L M + PDV TY
Sbjct: 165 QPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTY 224
Query: 93 YPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLR 152
LI F Q K ++ + M +GI P+ TY LI + + ++ML
Sbjct: 225 SILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLG 284
Query: 153 E-GVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCV 211
E P + + + G+ E + F GI P++ +N +
Sbjct: 285 EDDCKPDSWTMNSTLRAFGGNGQIEMM-----ENCYEKFQSSGIEPNIRTFNILLDSYGK 339
Query: 212 LGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE--LKLEMDEKGIP 266
G ++ ++ M S +V+Y VI F + G+ +K E +L E+ P
Sbjct: 340 SGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGD-LKQMEYLFRLMQSERIFP 395
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 117/286 (40%), Gaps = 27/286 (9%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
PD + S L V+ DK ++L M +G P+ TYN LI Y +A F E
Sbjct: 218 QPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMES 277
Query: 76 ILRDM-AKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
L M + PD T + F G++ K GI P+ T+ IL+ +
Sbjct: 278 TLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSY 337
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPD-EMINKGFLPD 193
+ G K + + E + + Y +T ++ Y F +A DL E + + +
Sbjct: 338 GKSGNYKK-----MSAVMEYMQKYHYSWT-IVTYNVVIDAFGRAGDLKQMEYLFRLMQSE 391
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
I PS V + + + ++ G+LR + + + D+V + ++ + G K
Sbjct: 392 RIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAY---GRMEKF 448
Query: 254 FELK--LE-MDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQG 296
E+K LE M++KG D++TY T++ + G
Sbjct: 449 AEMKGVLELMEKKGFK-------------PDKITYRTMVKAYRISG 481
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 7/194 (3%)
Query: 56 TYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKM 115
TY I+ YCR +++ +A + +M K+G V Y ++ + +T +L A + AKM
Sbjct: 390 TYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKM 449
Query: 116 VHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEF 175
+G P+ Y LI R L +A ++ EM R V P K YT +++ Y E
Sbjct: 450 KQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKEL 509
Query: 176 SKALDLPDEM-INKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
+ ++L E +N+G + ++ +V ++ R++E + +L+ M G D
Sbjct: 510 ERCVELYQEFRMNRGKIDRAMAGIMVGVFSKT------SRIDELMRLLQDMKVEGTRLDA 563
Query: 235 VSYTNVIKGFCKIG 248
Y++ + G
Sbjct: 564 RLYSSALNALRDAG 577
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 13/226 (5%)
Query: 60 LIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG 119
+++G+ + F EAV + K TY I +C+ K KA + +MV KG
Sbjct: 359 IVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG 418
Query: 120 ILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKAL 179
Y ++ + RLS A L +M + G P+ +IY L++ + + +A
Sbjct: 419 FDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAE 478
Query: 180 DLPDEMINKGFLPDGISPSLVI--YN--ARIHGCCVLGRVEEALGILRGMADMGLSPDVV 235
+ EM LPD +S + +I YN + C L + + RG D ++ +V
Sbjct: 479 KIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELY---QEFRMNRGKIDRAMAGIMV 535
Query: 236 SYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSD 281
F K + L +M +G L +Y S L+ L D
Sbjct: 536 GV------FSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRD 575
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%)
Query: 26 VHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGL 85
+++ + + +KA + M+ +GF V Y+ ++ Y + R +AV ++ M +RG
Sbjct: 395 INAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGC 454
Query: 86 SPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFD 145
P++ Y LI + L +A ++ +M +LPD +Y +I R L + +
Sbjct: 455 KPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVE 514
Query: 146 LFLE 149
L+ E
Sbjct: 515 LYQE 518
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 97/245 (39%), Gaps = 40/245 (16%)
Query: 28 SLLNVY----QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKR 83
SL+++Y Q+ A + + R S+ +N LI+GYCRA A + R M +R
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER 225
Query: 84 G-------------------------LSPD--VDTYYPLICGFCQTGKLGKAFEMKAKMV 116
L P+ V ++ LI GF QTG A +M+
Sbjct: 226 NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEML 285
Query: 117 HKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFS 176
KG+ P+ T ++ + G L + +L G+ + I T L++ Y GE
Sbjct: 286 EKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELD 345
Query: 177 KALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVS 236
A + M +K L + A I G V GR +A+ R M G PD V
Sbjct: 346 CAATVFSNMNHKDILS---------WTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVV 396
Query: 237 YTNVI 241
+ V+
Sbjct: 397 FLAVL 401
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 144/367 (39%), Gaps = 66/367 (17%)
Query: 58 NELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVH 117
N LI G RF+ +V M + G+ PD T+ P + KLG F + +H
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTF-PFV--LKSNSKLG--FRWLGRALH 149
Query: 118 KGILP---DADTYGILILT--LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
L D D++ L L + G+L AF +F E I+ L+N YC
Sbjct: 150 AATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRA 209
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSP 232
+ A L M P+ S S ++ I G G + A + M +
Sbjct: 210 KDMHMATTLFRSM------PERNSGS---WSTLIKGYVDSGELNRAKQLFELMPE----K 256
Query: 233 DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDF 292
+VVS+T +I GF + G+ A EM EKG+ +E T + +++
Sbjct: 257 NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK-------------PNEYTIAAVLSAC 303
Query: 293 HAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQ----DC 348
G L S + + Y+ D+ I R G +LV + + DC
Sbjct: 304 SKSG------ALGSGIRIHGYILDNGIKLDRAIGT-----------ALVDMYAKCGELDC 346
Query: 349 LSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYN 408
+ T+ N ++ + + +++ +++ G H+A + +M++ KP+ ++
Sbjct: 347 AA--------TVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVF- 397
Query: 409 LLIFDHC 415
L + C
Sbjct: 398 LAVLTAC 404
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 159/420 (37%), Gaps = 59/420 (14%)
Query: 17 PDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRG-FSPSVATYNELIHGYCRADRFKEAVG 75
PDE + +S +H+ + + H + + RG S VA +L+ ++
Sbjct: 27 PDESHFISLIHACKDTASLRHVHAQI---LRRGVLSSRVAA--QLVSCSSLLKSPDYSLS 81
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
I R+ +R +P V LI G + + + M+ G+ PD T+ ++ +
Sbjct: 82 IFRNSEER--NPFV--LNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGI 195
+ G L L+ V ++ L++ Y G+ A + +E PD I
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEES------PDRI 191
Query: 196 SP-SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAF 254
S++I+N I+G C + A + R M + + S++ +IKG+ GE +A
Sbjct: 192 KKESILIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAK 247
Query: 255 ELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYL 314
+L M EK + V+++TLIN F G+ A EM E
Sbjct: 248 QLFELMPEKNV-----------------VSWTTLINGFSQTGDYETAISTYFEMLE---- 286
Query: 315 TDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVG 374
GL TI A S + R + +++N +
Sbjct: 287 ----------KGLKPNEYTIAAVLSACS---KSGALGSGIRIHGYILDNGIKLDRAIGTA 333
Query: 375 LVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYKETVHSG 434
LV ++ G AA M H + + +I HG H+A +++ ++SG
Sbjct: 334 LVDMYAKCGELDCAATVFSNMNHKDILS----WTAMIQGWAVHGRFHQAIQCFRQMMYSG 389
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 24/244 (9%)
Query: 17 PDERNLLSQVHSLLNVYQVDKA----HNMLKYMIVRGFSPSVATYNELIHGYCRADRFKE 72
PD + +S + +L ++ + +A H ++++MI +S V YN L+ Y R +
Sbjct: 14 PDPLSYVSFIETLASLRRTLEADALFHEVVRFMIYGSYS--VRLYNALVSRYLRKE---V 68
Query: 73 AVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILIL 132
+ ++ +M KR + Y +I + G KA + ++ G+ D + Y +I
Sbjct: 69 SWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVID 128
Query: 133 TLCRKGRLSKAF---------DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPD 183
T + G L + +L ++ +GV+P ++ L N Y +G + + +
Sbjct: 129 TFGKYGELDEELQFGSFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLK 188
Query: 184 EMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMAD-MGLSPDVVSYTNVIK 242
M N +GI P+L++ N I+ G+ EAL I + + + + PDVV+Y+ ++K
Sbjct: 189 MMEN-----EGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMK 243
Query: 243 GFCK 246
F +
Sbjct: 244 AFTR 247
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 45 MIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
M GF+ ++ + R EA+ + + + PDV + ++ + G+
Sbjct: 191 MRTEGFTNEAV---KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQ 247
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSK-AFDLFLEMLREGVSPHKYIYT 163
+ ++ +M+ G+ P+A TY +LI L G+ K A LEM+ G+SP+ YT
Sbjct: 248 AKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYT 307
Query: 164 RLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
+ + +G+ A +L EM KGF+PD
Sbjct: 308 AVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 10/145 (6%)
Query: 25 QVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRG 84
+ H L ++ K N + P V + ++ Y A + KE + + M G
Sbjct: 212 RTHEALELFSQIKDKNRM---------PDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 85 LSPDVDTYYPLICGFCQTGKLGK-AFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKA 143
+SP+ TY LI G GK K A + +M+ G+ P+A TY + R+G+ A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 144 FDLFLEMLREGVSPHKYIYTRLMNY 168
+L EM +G P + + Y
Sbjct: 323 RELLQEMKGKGFVPDEKAVREALEY 347
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
L + GR +A +LF ++ + P +T ++ Y G+ + L + M L
Sbjct: 207 LSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRM-----LAS 261
Query: 194 GISPSLVIYNARIHGCCVLGRV-EEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVK 252
G+SP+ Y+ I G G+ ++A L M G+SP+ +YT V + F + G+
Sbjct: 262 GVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEES 321
Query: 253 AFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIN 290
A EL EM KG E + L+ +V + T+IN
Sbjct: 322 ARELLQEMKGKGFVPDEKAVREALEYKRGQV-FRTVIN 358
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREG 154
+ + G+ +A E+ +++ K +PD + ++ G+ + +F+ ML G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 155 VSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGR 214
VSP+ Y Y+ L+ G+ K D ++ + +G+SP+ Y A G+
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHK--DAKKYLLE--MMGNGMSPNAATYTAVFEAFVREGK 318
Query: 215 VEEALGILRGMADMGLSPD 233
E A +L+ M G PD
Sbjct: 319 EESARELLQEMKGKGFVPD 337
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/469 (20%), Positives = 183/469 (39%), Gaps = 76/469 (16%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+ P LL + +L + Q+ H+ + ++ GF +A N +++ YC+ D +A
Sbjct: 143 IKPGPVTLLEMLSGVLEITQLQCLHD---FAVIYGFDCDIAVMNSMLNLYCKCDHVGDAK 199
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILIL-- 132
+ M +R D+ ++ +I G+ G + + ++ +M G+ PD T+G +
Sbjct: 200 DLFDQMEQR----DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVS 255
Query: 133 -TLC--RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKG 189
T+C GR+ L ++++ G ++ T L+ Y G+ + + + + NK
Sbjct: 256 GTMCDLEMGRM-----LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK- 309
Query: 190 FLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIK-----GF 244
+V + I G LGR E+AL + M G + +V+ G
Sbjct: 310 --------DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGS 361
Query: 245 CKIGEPVKAFELK--LEMDEKGIPLYEDIYQSL--LD---------DLSDEVTYSTLIND 291
+G V + L+ +D + +Y LD + D V+++ +I+
Sbjct: 362 FDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISG 421
Query: 292 FHAQGNLMDAYCLESEMSEYSYLTDDVISSVRINGLNKKATTIEAKRSL----VRWFYQD 347
+ +L A L EM + D + V + A + + + +R F +
Sbjct: 422 YAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRP 481
Query: 348 CLSI---------------PAYRTYDTLIENCSNNEFKTVVG---LVKDFSMRGLAHKAA 389
C + A R +D++ +K VV L+ + G A
Sbjct: 482 CSLVDTALVDMYSKCGYLEAAQRCFDSI-------SWKDVVSWGILIAGYGFHGKGDIAL 534
Query: 390 KAHDKMLHGNYKPEGAIYNLLIFDHCRH-GNVHKAYDMYKETVHS-GVE 436
+ + + LH +P I+ L + C H G V + ++ V GVE
Sbjct: 535 EIYSEFLHSGMEPNHVIF-LAVLSSCSHNGMVQQGLKIFSSMVRDFGVE 582
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 163/426 (38%), Gaps = 62/426 (14%)
Query: 44 YMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTG 103
++I F V + + + + A + M +R D T+ ++ GFCQ+G
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPER----DATTWNAMLSGFCQSG 132
Query: 104 KLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM----LREGVSPHK 159
KAF + +M I PD+ + ++TL + K+ L M +R GV
Sbjct: 133 HTDKAFSLFREMRLNEITPDS----VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV 188
Query: 160 YIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEAL 219
+ ++ Y G+ A L E I++G ++V +N+ V G +A
Sbjct: 189 TVANTWISTYGKCGDLDSA-KLVFEAIDRG------DRTVVSWNSMFKAYSVFGEAFDAF 241
Query: 220 GILRGMADMGLSPDVVSYTNVIKGFCKIGEPVK--------AFELKLEMDEKGIPLYEDI 271
G+ M PD+ ++ N+ C+ E + A L + D + I + +
Sbjct: 242 GLYCLMLREEFKPDLSTFINLAAS-CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 300
Query: 272 YQSLLDDLSDE-----------VTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDVIS 320
Y D S V+++ +I+ + +G++ +A L M + D V
Sbjct: 301 YSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL 360
Query: 321 SVRINGLNK------------KATTIEAKRSLVRW------FYQDCLSIPAYRTYDTLIE 362
I+G K +A KR V Y C SI R + +
Sbjct: 361 LSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEAR---DIFD 417
Query: 363 NCSNNEFKTVVGLVKDFSMRGLAHKAAKAHDKMLHGNYKPEGAIYNLLIFDHCRH-GNVH 421
N T ++ +++ G+ +A K KM+ +YKP + L + C H G++
Sbjct: 418 NTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITF-LAVLQACAHSGSLE 476
Query: 422 KAYDMY 427
K ++ +
Sbjct: 477 KGWEYF 482
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 6/221 (2%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G ++N I +C A +R+M K GL+PDV TY LI + +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNY 168
+ MV KG P+ T+ + I L + R A DL L M + V P Y ++
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVI-- 289
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
KG F E + G P+L IY IH C G + A + +
Sbjct: 290 ---KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRK 346
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYE 269
P++ + ++KG K G+ +A + +E+ + +P +
Sbjct: 347 KWYPNLDTVEMLLKGLVKKGQLDQAKSI-MELVHRRVPPFR 386
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 24/243 (9%)
Query: 119 GILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
GI DA ++ I I + C G L A+ EM + G++P YT L++
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 179 LDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYT 238
L + M+ KG P+L +N RI R +A +L M + + PD ++Y
Sbjct: 232 NGLWNLMVLKG-----CKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYN 286
Query: 239 NVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNL 298
VIKGF P A + M KG IYQ T+I+ GN
Sbjct: 287 MVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQ-------------TMIHYLCKAGNF 333
Query: 299 MDAYCLESE-MSEYSYLTDDVISSVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTY 357
AY + + M + Y D + + + GL KK +AK S++ ++ +P +R+
Sbjct: 334 DLAYTMCKDCMRKKWYPNLDTVEML-LKGLVKKGQLDQAK-SIMELVHR---RVPPFRSK 388
Query: 358 DTL 360
L
Sbjct: 389 QLL 391
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 1 MMITASCKNNKAVILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNEL 60
+M+ CK P+ ++ L+N + A+++L M P TYN +
Sbjct: 237 LMVLKGCK--------PNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMV 288
Query: 61 IHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGI 120
I G+ A A + M +G P++ Y +I C+ G A+ M + K
Sbjct: 289 IKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKW 348
Query: 121 LPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHK 159
P+ DT +L+ L +KG+L +A + +E++ V P +
Sbjct: 349 YPNLDTVEMLLKGLVKKGQLDQAKSI-MELVHRRVPPFR 386
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 5/208 (2%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
+D D + + S + +D A+ ++ M G +P V TY LI + +R
Sbjct: 173 IDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGN 232
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
G+ M +G P++ T+ I + A ++ M + PD+ TY ++I
Sbjct: 233 GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGF 292
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
A ++ M +G P+ IY +++Y C G F A + + + K + P+
Sbjct: 293 FLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNL 352
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGIL 222
+ ++ + G G++++A I+
Sbjct: 353 DTVEML-----LKGLVKKGQLDQAKSIM 375
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 7/211 (3%)
Query: 41 MLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG-ILRDMAKRGLSPDVDTYYPLICGF 99
+L+ + G P+ T+ L + R ++V I+ +M G SPD T L+
Sbjct: 122 ILQRTLRSGCLPNPQTHLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSL 181
Query: 100 CQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEML-REGVSPH 158
C KL +A ++ +M G +PD ++YG +I +LC + + + EM+ + G+SP
Sbjct: 182 CAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPR 241
Query: 159 KYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEA 218
K + T++ E KA+++ + + ++ + + S Y + GC + A
Sbjct: 242 KGMLTKVAAALRANREIWKAIEMIEFVESRDYPVEFES-----YEVVVEGCLEVREYILA 296
Query: 219 LGILRGMADMGLSPDVVSYTNVIKGFCKIGE 249
++ M D G P + V++ IGE
Sbjct: 297 GKVVMRMTDRGFIPYIKVRQKVVERLINIGE 327
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 12/243 (4%)
Query: 9 NNKAVILDPDERNLL---SQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYC 65
N + V D E++L+ + + N Q D+A N++K M + G P V T+N LI G+
Sbjct: 170 NARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFS 229
Query: 66 RADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDAD 125
++ IL M G PDV ++ +I G + KAF+ +M+ G+ P++
Sbjct: 230 HMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSA 289
Query: 126 TYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEM 185
T L+ + ++ + G+ H ++ + L++ Y G S+A+ L +
Sbjct: 290 TIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKT 349
Query: 186 INKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFC 245
K + V +N+ I G ++A+ + M G D +++T ++
Sbjct: 350 PKK---------TTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACS 400
Query: 246 KIG 248
G
Sbjct: 401 HAG 403
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 9/227 (3%)
Query: 54 VATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKA 113
+ +N +I GY + EA+ +++DM G+ PDV T+ LI GF K E+
Sbjct: 183 LVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILE 242
Query: 114 KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKG 173
M G PD ++ +I L + KAFD F +ML G+ P+ L+
Sbjct: 243 LMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLA 302
Query: 174 EFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPD 233
++ + G G S ++ ++G C G + EA+ + R
Sbjct: 303 YMKHGKEIHGYSVVTGLEDHGFVRSALL---DMYGKC--GFISEAMILFRKTP----KKT 353
Query: 234 VVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS 280
V++ ++I + G KA EL +M+ G L + ++L S
Sbjct: 354 TVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACS 400
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 28/257 (10%)
Query: 54 VATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKA 113
+ +Y +I GY + A RD+ + DV + LI G+ Q G+ +AF++ +
Sbjct: 238 IISYTSMIDGYAKGGDMVSA----RDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFS 293
Query: 114 KMVHKGILPDADTYGILILTLCRKG--RLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
+M K + PD L+ + G L + D +L S H Y+ L++
Sbjct: 294 EMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH-YVVPALIDMNAK 352
Query: 172 KGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
G +A L +EM + D +S ++ IHGC EA+ + M D G+
Sbjct: 353 CGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCG-----SEAIRLFEKMVDEGIV 403
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLIND 291
PD V++T ++K C V E+G+ +E + + L+ YS ++N
Sbjct: 404 PDEVAFTVILK-VCGQSRLV----------EEGLRYFE-LMRKKYSILASPDHYSCIVNL 451
Query: 292 FHAQGNLMDAYCLESEM 308
G L +AY L M
Sbjct: 452 LSRTGKLKEAYELIKSM 468
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 108/271 (39%), Gaps = 37/271 (13%)
Query: 51 SPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFC-QTGKLGKAF 109
SP +N LI GY F E V IL M + GL+ + +PL+ C G++
Sbjct: 71 SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGS 130
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM-LREGVSPHKYIYTRLMNY 168
+ ++ G D + + L A +F EM R VS +T L+
Sbjct: 131 SVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVS-----WTALVVA 185
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
Y GE +A + D M + +L +NA + G G + A + M
Sbjct: 186 YVKSGELEEAKSMFDLMPER---------NLGSWNALVDGLVKSGDLVNAKKLFDEMP-- 234
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
D++SYT++I G+ K G+ V A +L E +G+ D +S L
Sbjct: 235 --KRDIISYTSMIDGYAKGGDMVSARDLFEE--ARGV---------------DVRAWSAL 275
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDVI 319
I + G +A+ + SEM + D+ I
Sbjct: 276 ILGYAQNGQPNEAFKVFSEMCAKNVKPDEFI 306
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 164/397 (41%), Gaps = 56/397 (14%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
G V L+ Y R + A D+A++ + ++ L+ G+ ++G+L +A
Sbjct: 134 GLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEK----NTVSWNSLLHGYLESGELDEA 189
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM-LREGVSPHKYIYTRLMN 167
+ K+ K DA ++ ++I + +KG + A LF M L+ S + L+
Sbjct: 190 RRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPAS-----WNILIG 240
Query: 168 YYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMAD 227
Y E A D M K +G+S + I G LG V+ A + R M+
Sbjct: 241 GYVNCREMKLARTYFDAMPQK----NGVS-----WITMISGYTKLGDVQSAEELFRLMS- 290
Query: 228 MGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYST 287
D + Y +I + + G+P A +L +M E+ + DE+T S+
Sbjct: 291 ---KKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQ-----------PDEITLSS 336
Query: 288 LINDFHAQGNLMDAYCLESEMSEYSYLTDDVISSVRIN----------------GLNKKA 331
+++ GN +ES ++E+ DD++S+ I+ LNKK
Sbjct: 337 VVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKD 396
Query: 332 TTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSNNEFKTVVGLVKDFSMRGLAHKAAKA 391
T + +++ + ++ A + +IE T GL+ +S GL + K
Sbjct: 397 TV--SYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKC 454
Query: 392 HDKMLHGNYKPEGAIYNLLIFDHCRHGNVHKAYDMYK 428
+ M N +P Y +++ R G + +AY++ K
Sbjct: 455 FNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIK 491
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 90 DTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLE 149
+ Y LI C+ G++ A + M + + TY ++ +L RK ++ +A+ +
Sbjct: 108 NAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVES 167
Query: 150 MLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGC 209
M + VS Y + +C+ GE A + + + DG SP Y+A + G
Sbjct: 168 MRSKSVSMDVTAYNYFLTSHCYDGELESASE-----VMRKIEEDGNSPDSRSYDALVLGA 222
Query: 210 CVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
C G+VE A+ ILR M + G++ ++ +VI G + G
Sbjct: 223 CRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGG 261
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 61/122 (50%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYY 93
+++ A +++ + G SP +Y+ L+ G CRA + + A+ ILR M + G++ T+
Sbjct: 192 ELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHA 251
Query: 94 PLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLRE 153
+I G + G E K + D++++G L L ++ R +A + EM+
Sbjct: 252 HVITGLVEGGYYALGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMR 311
Query: 154 GV 155
G+
Sbjct: 312 GL 313
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 71/163 (43%)
Query: 28 SLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSP 87
SL Y++++A +++ M + S V YN + +C + A ++R + + G SP
Sbjct: 151 SLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSP 210
Query: 88 DVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLF 147
D +Y L+ G C+ GK+ A + +M G+ T+ +I L G + +
Sbjct: 211 DSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFV 270
Query: 148 LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
+ + + + L + + +A+ + EM+ +G
Sbjct: 271 MAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGL 313
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 118 KGILPDAD-------TYGILILTLCRKGRLSKAFDLFLEML--REGVSPHKY--IYTRLM 166
+ +LP D Y ILI LC+ GR+ A + +M R G++P Y I L
Sbjct: 94 RRVLPQIDGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLT 153
Query: 167 NYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMA 226
Y + +A + + M +K +S + YN + C G +E A ++R +
Sbjct: 154 RKY----KIEEAWRVVESMRSKS-----VSMDVTAYNYFLTSHCYDGELESASEVMRKIE 204
Query: 227 DMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPL 267
+ G SPD SY ++ G C+ G+ A + M+E G+ +
Sbjct: 205 EDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTV 245
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 41/267 (15%)
Query: 20 RNLLSQVHSLLNVYQ----VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
RN L L+ +Y + AH + M R SP +N LI GY ++++A+
Sbjct: 124 RNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSP--FAWNSLISGYAELGQYEDAMA 181
Query: 76 ILRDMAKRGLSPDVDTYYPLI--CGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
+ MA+ G+ PD T+ ++ CG + ++G+A + +V +G D L++
Sbjct: 182 LYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEA--IHRDLVKEGFGYDVYVLNALVVM 239
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHK-YI-YTRLMNYYCFKGEFSKALDLPDEMINKGFL 191
+ G + KA ++F +M+ PHK Y+ + ++ Y G +ALD+ M+ G
Sbjct: 240 YAKCGDIVKARNVF-DMI-----PHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIE 293
Query: 192 PDGISPSLVI-------YNARIHGCCVLGRVEEALGILRGMA----------------DM 228
PD ++ S V+ + ++HG + +E L + + D
Sbjct: 294 PDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQ 353
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFE 255
L D VS+ +I K +K FE
Sbjct: 354 MLERDTVSWNAIISAHSKNSNGLKYFE 380
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Query: 22 LLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMA 81
L S +H++ V + D + M + P+ + +I R F+ A +L ++
Sbjct: 411 LHSLLHAIDEVLEFDLVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLK 470
Query: 82 KRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLS 141
L P+ + ++ G+ + + A + +M G+ PD+ T+G LI ++ ++
Sbjct: 471 NFNLEPNSSMFNCILAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINNCTQEDAIT 530
Query: 142 KAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKA 178
K ++ EM + GV K IY L++ Y G+F KA
Sbjct: 531 KYYE---EMKQAGVQATKRIYMSLIDAYAASGKFEKA 564
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 103/239 (43%), Gaps = 12/239 (5%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D L+S + + V ++ ++I RGF V+ N L+ Y + + V +
Sbjct: 182 DSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG--EGGVAVA 239
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILP-DADTYGILILTLCR 136
R + + + D +Y ++ + Q+G +AFE+ ++V ++ +A T ++L +
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 137 KGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGIS 196
G L + +++R G+ + T +++ YC G A D M NK
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS---- 355
Query: 197 PSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFE 255
+ A I G + G +AL + M D G+ P+ +++ +V+ G V+ +
Sbjct: 356 -----WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
+ + + K M G P+ ++ G C+ +EA+ + M +G P+V Y +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
+ FC+ K+ A + KM + GI P+A +YG+L+ L L A EML G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
SP+ + L++ C +A D + KGF
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V +A + M +G P V Y ++ +C+A + ++A I R M G++P+ +Y
Sbjct: 147 VQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGV 206
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L+ G L A ++M+ G P+ T+ L+ LCR
Sbjct: 207 LVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCR 248
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
E+ KM G++P+A ++ LC+ G + +A LF M +G P IYT ++ +
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
C + A + +M N +GI+P+ Y + G +++A+ M + G
Sbjct: 177 CKAHKIEDAKRIFRKMQN-----NGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 230 LSPDVVSYTNVIKGFCKI 247
SP+V ++ ++ C++
Sbjct: 232 HSPNVPTFVELVDALCRV 249
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
I + M + GL P+ ++ G C+ G + +A ++ M KG +P+ Y ++ C
Sbjct: 121 IFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN--YYCFKGEFSKALDLPDEMINKGFLPD 193
+ ++ A +F +M G++P+ + Y L+ Y C A+ EM+ G
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNC--NMLDDAVAFCSEMLESGH--- 232
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
SP++ + + C + VE+A + + G + +V
Sbjct: 233 --SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNV 271
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Query: 36 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPL 95
+ + + K M G P+ ++ G C+ +EA+ + M +G P+V Y +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 96 ICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGV 155
+ FC+ K+ A + KM + GI P+A +YG+L+ L L A EML G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 156 SPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGF 190
SP+ + L++ C +A D + KGF
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 35 VDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYP 94
V +A + M +G P V Y ++ +C+A + ++A I R M G++P+ +Y
Sbjct: 147 VQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGV 206
Query: 95 LICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCR 136
L+ G L A ++M+ G P+ T+ L+ LCR
Sbjct: 207 LVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCR 248
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 110 EMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYY 169
E+ KM G++P+A ++ LC+ G + +A LF M +G P IYT ++ +
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
C + A + +M N +GI+P+ Y + G +++A+ M + G
Sbjct: 177 CKAHKIEDAKRIFRKMQN-----NGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 230 LSPDVVSYTNVIKGFCKI 247
SP+V ++ ++ C++
Sbjct: 232 HSPNVPTFVELVDALCRV 249
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
I + M + GL P+ ++ G C+ G + +A ++ M KG +P+ Y ++ C
Sbjct: 121 IFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 136 RKGRLSKAFDLFLEMLREGVSPHKYIYTRLMN--YYCFKGEFSKALDLPDEMINKGFLPD 193
+ ++ A +F +M G++P+ + Y L+ Y C A+ EM+ G
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNC--NMLDDAVAFCSEMLESGH--- 232
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDV 234
SP++ + + C + VE+A + + G + +V
Sbjct: 233 --SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNV 271
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 20/259 (7%)
Query: 16 DPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVG 75
D + + S V ++ ++D+A + + R V + +++GY + +RF EA+
Sbjct: 210 DKNVKCWTSMVFGYVSTGRIDEA----RVLFERSPVKDVVLWTAMMNGYVQFNRFDEALE 265
Query: 76 ILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLC 135
+ R M G+ PD L+ G QTG L + + + + D L+
Sbjct: 266 LFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYA 325
Query: 136 RKGRLSKAFDLFLEML-REGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
+ G + A ++F E+ R+ S IY MN G +ALDL EM N G D
Sbjct: 326 KCGCIETALEVFYEIKERDTASWTSLIYGLAMN-----GMSGRALDLYYEMENVGVRLDA 380
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADM-GLSPDVVSYTNVIKGFCKIGEPVKA 253
I+ + A + C G V E I M + + P + +I C+ G +A
Sbjct: 381 IT-----FVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEA 435
Query: 254 FEL----KLEMDEKGIPLY 268
EL + E DE +P+Y
Sbjct: 436 EELIDKMRGESDETLVPVY 454
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 18/236 (7%)
Query: 46 IVR-GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGK 104
IVR GF V N L+H Y A I M R DV ++ ++ G+C+ G
Sbjct: 143 IVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR----DVVSWTSMVAGYCKCGM 198
Query: 105 LGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTR 164
+ A EM +M H+ + T+ I+I + KA DLF M REGV ++ +
Sbjct: 199 VENAREMFDEMPHRNLF----TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
+++ G AL+ E + + ++ +L++ A + G +E+A+ + G
Sbjct: 255 VISSCAHLG----ALEF-GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 225 MADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLS 280
+ + D +S++++IKG G KA +M G + + ++L S
Sbjct: 310 LPE----TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACS 361
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 14/251 (5%)
Query: 14 ILDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEA 73
+++PD + ++ + V + +I GF + N L+H Y A
Sbjct: 116 LVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASA 175
Query: 74 VGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILT 133
+ M ++ D+ + +I GF + GK +A + +M KGI PD T L+
Sbjct: 176 YKVFDKMPEK----DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 231
Query: 134 LCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPD 193
+ G L+ + + M++ G++ + + L++ Y G +A L DEM++K
Sbjct: 232 CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK----- 286
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADM-GLSPDVVSYTNVIKGFCKIGEPVK 252
+ V + + I G V G +EA+ + + M GL P +++ ++ G +
Sbjct: 287 ----NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 342
Query: 253 AFELKLEMDEK 263
FE M E+
Sbjct: 343 GFEYFRRMREE 353
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 32/270 (11%)
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLI--CGFCQTGKLGKAFE 110
SV + N LI GY + + +EAV + ++M RG++P T+ ++ C ++ LG F
Sbjct: 594 SVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 111 MKAKMVHKGILPDADTYGILILTLCRKGR-LSKAFDLFLEMLREGVSPHKYI-YTRLMNY 168
++ +G + + GI +L + R +++A LF E+ SP + +T +M+
Sbjct: 653 --GQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL----SSPKSIVLWTGMMSG 706
Query: 169 YCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADM 228
+ G + +AL EM + G LPD + V+ R+ C VL + E I + +
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVL---RV--CSVLSSLREGRAIHSLIFHL 761
Query: 229 GLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYSTL 288
D ++ +I + K G+ + ++ EM + S+ V++++L
Sbjct: 762 AHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR----------------SNVVSWNSL 805
Query: 289 INDFHAQGNLMDAYCLESEMSEYSYLTDDV 318
IN + G DA + M + + D++
Sbjct: 806 INGYAKNGYAEDALKIFDSMRQSHIMPDEI 835
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 118/312 (37%), Gaps = 69/312 (22%)
Query: 34 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPD----- 88
+++A + + M+ RG +PS T+ ++ + + + KRG S +
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 89 ----------------------------VDTYYPLICGFCQTGKLGKAFEMKAKMVHKGI 120
+ + ++ G Q G +A + +M H G+
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728
Query: 121 LPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIY-----------TRLMNYY 169
LPD T+ + +L +C L LREG + H I+ L++ Y
Sbjct: 729 LPDQATF-VTVLRVCS----------VLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMY 777
Query: 170 CFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMG 229
G+ + + DEM + ++V +N+ I+G G E+AL I M
Sbjct: 778 AKCGDMKGSSQVFDEMRRR--------SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSH 829
Query: 230 LSPDVVSYTNVIKGFC---KIGEPVKAFELKLEMDEKGIPLYEDIYQSLLDDLSDEVTYS 286
+ PD +++ V+ K+ + K FE+ + + GI D + + + DL Y
Sbjct: 830 IMPDEITFLGVLTACSHAGKVSDGRKIFEMMI--GQYGIEARVD-HVACMVDLLGRWGYL 886
Query: 287 TLINDFHAQGNL 298
+DF NL
Sbjct: 887 QEADDFIEAQNL 898
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 9/176 (5%)
Query: 85 LSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAF 144
L DV + ++ + GK GK + I P+ T+ I++ T R+ +
Sbjct: 121 LEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGR 180
Query: 145 DLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNA 204
+ M++ G+ + Y L++ Y S A + + +++ P+ V +
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD---------PNTVCWTC 231
Query: 205 RIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEM 260
G G EEA+ + M D G PD +++ VI + ++G+ A L EM
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM 287
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 53 SVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMK 112
++ +YN + G CR F++A +L ++ +R L T+ L+ G G + K ++
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 113 AKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFK 172
+++V G+ + LI + G + A +F M V +T ++ +
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS----WTSMITGFAKH 553
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGM-ADMGLS 231
G + L+ ++MI +G+ P+ V Y A + C +G V E M D +
Sbjct: 554 GFAIRVLETFNQMI-----EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608
Query: 232 PDVVSYTNVIKGFCKIGEPVKAFEL 256
P + Y ++ C+ G AFE
Sbjct: 609 PKMEHYACMVDLLCRAGLLTDAFEF 633
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 14/251 (5%)
Query: 31 NVYQVDKAHNMLKYMIVRG-FSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDV 89
N +A N+ MI +G P+ T++ + +L KRGL+ +
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 90 DTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLE 149
+I F ++ ++ A + K ++ +Y + CR +AF L E
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLV----SYNTFLDGTCRNLNFEQAFKLLSE 464
Query: 150 MLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGC 209
+ + + + L++ G K E I+ + G+S + + NA I
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKG-----EQIHSQVVKLGLSCNQPVCNALISMY 519
Query: 210 CVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIPLYE 269
G ++ A + M + +V+S+T++I GF K G ++ E +M E+G+ E
Sbjct: 520 SKCGSIDTASRVFNFMEN----RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 270 DIYQSLLDDLS 280
Y ++L S
Sbjct: 576 VTYVAILSACS 586
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 139/340 (40%), Gaps = 51/340 (15%)
Query: 54 VATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKA 113
V +YN +I GY ++ +++A+ ++R+M L PD T ++ F + + K E+
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG 266
Query: 114 KMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEM-LREGVSPHKYIYTRLMNYYCFK 172
++ KGI D L+ + R+ + +F + R+G+S + L+ Y
Sbjct: 267 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS-----WNSLVAGYVQN 321
Query: 173 GEFSKALDLPDEMINKGFLPDGISPSLVI----------YNARIHGCCVLGRVEEALGIL 222
G +++AL L +M+ P ++ S VI ++HG + G + I
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 223 RGMADMGLSP----------------DVVSYTNVIKGFCKIGEPVKAFELKLEMDEKGIP 266
+ DM D VS+T +I G G +A L EM +G+
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 267 LYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLM-DAYCLESEMSEYSYLTDDVISSVRIN 325
+ + ++L S + L+++ N M Y L E+ Y+ + D
Sbjct: 442 PNQVAFVAVLTACS----HVGLVDEAWGYFNSMTKVYGLNQELEHYAAVAD--------- 488
Query: 326 GLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCS 365
L +A +E + + + C+ P + TL+ +CS
Sbjct: 489 -LLGRAGKLEEAYNFIS---KMCVE-PTGSVWSTLLSSCS 523
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 13/234 (5%)
Query: 15 LDPDERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAV 74
L PD L S + V K + Y+I +G V + L+ Y ++ R +++
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 75 GILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTL 134
+ + R D ++ L+ G+ Q G+ +A + +MV + P A + +I
Sbjct: 298 RVFSRLYCR----DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPAC 353
Query: 135 CRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDG 194
L L +LR G + +I + L++ Y G A + D M + D
Sbjct: 354 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM----NVLDE 409
Query: 195 ISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIG 248
+S + +I +H G EA+ + M G+ P+ V++ V+ +G
Sbjct: 410 VSWTAIIMGHALH-----GHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG 458
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 88 DVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLF 147
DV +Y +I G+ Q+G A M +M + PD+ T ++ + K ++
Sbjct: 206 DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIH 265
Query: 148 LEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIH 207
++R+G+ YI + L++ Y S ++ + + ++ + DGIS +N+ +
Sbjct: 266 GYVIRKGIDSDVYIGSSLVDMYA----KSARIEDSERVFSRLYCRDGIS-----WNSLVA 316
Query: 208 GCCVLGRVEEALGILRGMADMGLSPDVVSYTNVI 241
G GR EAL + R M + P V++++VI
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI 350
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 176/421 (41%), Gaps = 56/421 (13%)
Query: 57 YNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTG---KLGKAFEMKA 113
YN +I G+ + A+ + M G PD T+ ++ G K F A
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAA 175
Query: 114 KMVHKGILPDADTYGILILTLCRKG--RLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCF 171
G + + + + C L A +F E+L + + +T +M Y
Sbjct: 176 LKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEK----DERSWTTMMTGYVK 231
Query: 172 KGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLS 231
G F DL +E++ + D + LV YNA I G G +EAL ++R M G+
Sbjct: 232 NGYF----DLGEELLEG--MDDNMK--LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIE 283
Query: 232 PDVVSYTNVIK-----GFCKIGEPVKAFELKLE-----MDEKGIPLYE-----DIYQSLL 276
D +Y +VI+ G ++G+ V A+ L+ E D + LY D +++
Sbjct: 284 LDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIF 343
Query: 277 DDL--SDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDDV-ISSVRINGLNKKATT 333
+ + D V+++ L++ + + G++ +A + EM E + L+ + IS + NG ++
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 334 IEA--KRS-------LVRWFYQDCLSIPAY----RTYDTLIENCSNNEFKTVVGLVKDFS 380
+ + KR + C + AY + + L++ ++ L+ ++
Sbjct: 404 LFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYA 463
Query: 381 MRGLAHKAAKAHDKMLHGNYKP--EGAIYNLLIFDHCRHGNVHKAYDMYKETVHSGVEIG 438
G+ +A + M P + +N LI +HG+ +A D+Y+E + G+
Sbjct: 464 KCGVVEEARQVFRTM------PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
Query: 439 R 439
R
Sbjct: 518 R 518
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 49 GFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTGKLGKA 108
GF S++ N LI Y + +EA + R M D ++ LI Q G +A
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEARQVFRTMP----CLDSVSWNALIAALGQHGHGAEA 502
Query: 109 FEMKAKMVHKGILPDADTYGILILTLCRKGRL----SKAFDLFLEMLREGVSPHKYIYTR 164
++ +M+ KGI PD T + +LT C L K FD + R + P Y R
Sbjct: 503 VDVYEEMLKKGIRPDRITL-LTVLTACSHAGLVDQGRKYFDSMETVYR--IPPGADHYAR 559
Query: 165 LMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRG 224
L++ C G+FS A + + LP P+ I+ A + GC V G +E LGI+
Sbjct: 560 LIDLLCRSGKFSDAESVIES------LP--FKPTAEIWEALLSGCRVHGNME--LGIIAA 609
Query: 225 MADMGLSPD 233
GL P+
Sbjct: 610 DKLFGLIPE 618
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 44 YMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSPDVDTYYPLICGFCQTG 103
Y I F + + ++ Y + +A + ++ D+ + L+ + ++G
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESG 455
Query: 104 KLGKAFEMKAKMVHKGILPDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYT 163
G+A + M +G+ P+ T+ ++IL+L R G++ +A D+FL+M G+ P+ +T
Sbjct: 456 LSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWT 515
Query: 164 RLMNYYCFKGEFSKALDLPDEMINKGFLPDGISPSLVI 201
+MN G +A+ +M G P+ S ++ +
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL 553
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 36/242 (14%)
Query: 28 SLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGILRDMAKRGLSP 87
SLLN Y + + R F V T+N +I GY + ++A+ + + M L
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Query: 88 DVDTYYPLICGFCQTG--KLGK---------AFE-------------------MKAKMVH 117
D T L+ +T KLGK +FE + AK V
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 118 KGIL-PDADTYGILILTLCRKGRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFS 176
+ D + L+ G +A LF M EGV P+ + ++ G+
Sbjct: 434 DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVD 493
Query: 177 KALDLPDEMINKGFLPDGISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVS 236
+A D+ +M + G +P+ IS + ++ +GC EEA+ LR M + GL P+ S
Sbjct: 494 EAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCS-----EEAILFLRKMQESGLRPNAFS 548
Query: 237 YT 238
T
Sbjct: 549 IT 550
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 126/298 (42%), Gaps = 43/298 (14%)
Query: 18 DERNLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRADRFKEAVGIL 77
D+ + V + V +D A+++ M + + AT N LI+GY ++A +
Sbjct: 934 DDIAWTTMVSAYRRVLDMDSANSLANQMSEK----NEATSNCLINGYMGLGNLEQAESLF 989
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
M + D+ ++ +I G+ Q + +A + KM+ +GI+PD T +I
Sbjct: 990 NQMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHL 1045
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKAL----DLPDEMINKGFLPD 193
G L ++ + L+ G YI + L++ Y G +AL +LP +
Sbjct: 1046 GVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK--------- 1096
Query: 194 GISPSLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKA 253
+L +N+ I G G +EAL + M + P+ V++ +V G
Sbjct: 1097 ----NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG----- 1147
Query: 254 FELKLEMDEKGIPLYEDIYQSLLDD---LSDEVTYSTLINDFHAQGNLMDAYCLESEM 308
+ ++G IY+S++DD +S+ Y +++ F G + +A L M
Sbjct: 1148 ------LVDEG----RRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM 1195
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 131/350 (37%), Gaps = 56/350 (16%)
Query: 21 NLLSQVHSLLNVYQVDKAHNMLKYMIVRGFSPSVATYN---ELIHGYCRADRFKEAVGIL 77
N + VHSL +V H +R FS S++ + I C + E+ L
Sbjct: 747 NAFANVHSL----RVPSHH-------LRDFSASLSLAPPNLKKIIKQCSTPKLLESA--L 793
Query: 78 RDMAKRGLSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKGILPDADTYGILILTLCRK 137
M K L+ D I +L A +M P+ Y L
Sbjct: 794 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQE----PNVFVYNALFKGFVTC 849
Query: 138 GRLSKAFDLFLEMLREGVSPHKYIYTRLMNYYCFKGEFSKALDLPDEMINKGFLPDGISP 197
++ +L++ MLR+ VSP Y Y+ L+ F F ++L GF +
Sbjct: 850 SHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTT 909
Query: 198 SLVIYNARIHGCCVLGRVEEALGILRGMADMGLSPDVVSYTNVIKGFCKIGEPVKAFELK 257
+ Y+A GR+ EA + M + D +++T ++ + ++ + A L
Sbjct: 910 LIDFYSA-------TGRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLA 958
Query: 258 LEMDEKGIPLYEDIYQSLLDDLSDEVTYSTLINDFHAQGNLMDAYCLESEMSEYSYLTDD 317
+M EK +E T + LIN + GNL A L ++M D
Sbjct: 959 NQMSEK-----------------NEATSNCLINGYMGLGNLEQAESLFNQMP-----VKD 996
Query: 318 VIS-SVRINGLNKKATTIEAKRSLVRWFYQDCLSIPAYRTYDTLIENCSN 366
+IS + I G ++ EA + + IP T T+I C++
Sbjct: 997 IISWTTMIKGYSQNKRYREAIAVFYKMMEEGI--IPDEVTMSTVISACAH 1044