Miyakogusa Predicted Gene
- Lj3g3v3026760.4
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3026760.4 CUFF.45209.4
(1117 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G27900.2 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 1330 0.0
AT2G27900.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 1330 0.0
>AT2G27900.2 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2451, C-terminal
(InterPro:IPR019514), Vacuolar protein sorting-associated
protein 54 (InterPro:IPR019515); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr2:11877654-11885238 FORWARD LENGTH=1124
Length = 1124
Score = 1330 bits (3442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/1139 (61%), Positives = 823/1139 (72%), Gaps = 54/1139 (4%)
Query: 1 MQPNLF-PFGSVLGNPFIFDA--DLSDXXXXXXXXXXIDSSRVFFLLPFFLLSQG-GAMD 56
MQPNLF PFGSVLGNPF+F+ DL++ +SSRVFFLLPF LLSQG G MD
Sbjct: 1 MQPNLFFPFGSVLGNPFLFNGGGDLNELGSGAA----FESSRVFFLLPF-LLSQGTGVMD 55
Query: 57 LSKVGEKILSSVRSARSLGLLPPAS--DRPEVPXXXXXXXXXXXXXXGLPPHQRYXXXXX 114
LSKVGEK LSSV+SA SLGLLP S DRPE+P GLP QR
Sbjct: 56 LSKVGEKFLSSVKSATSLGLLPSPSISDRPEIPARAAAAAAVARALAGLPSDQRLSISST 115
Query: 115 XXXXXXIYGSRP-GQVVXXXXXXXXXXDFDPIKHVLEHIPAEENELSYFEKQAALRLAQL 173
IYG+RP Q V DFDP++H+LE++P +E+EL+YFEKQA LRL QL
Sbjct: 116 ATELNSIYGNRPLPQQVEELEEGFYEEDFDPVRHILENVPDDESELAYFEKQATLRLVQL 175
Query: 174 DKVAEHLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVN 233
DKVAE LS HVMEHHEVMVKGMNLVRELEKDL+IANVIC NGRR+LTSSMNE SRDLIV+
Sbjct: 176 DKVAETLSHHVMEHHEVMVKGMNLVRELEKDLKIANVICKNGRRNLTSSMNEASRDLIVH 235
Query: 234 SYSKKKQALMDMLPVLTELQRSLDMQSMLESLVEEGNYWKAFQVLSEYLQLLDSLSELSA 293
++SKKKQAL+DMLP+LT+L+ + MQS LE LVE+GNY KAFQVLSEYLQLLDSLSE SA
Sbjct: 236 THSKKKQALLDMLPILTDLRHARVMQSNLEDLVEDGNYCKAFQVLSEYLQLLDSLSEFSA 295
Query: 294 IQEMSRGVEVWLGRTLQKLDALLLEVCQEFKEDGYITVIDAYALIGDTTGLAEKIQSFFM 353
QEM+RGVEVWLGRTL KLD+LLL VCQEFKED Y+ V+DAYALIGD +GLAEKIQSFFM
Sbjct: 296 AQEMTRGVEVWLGRTLHKLDSLLLGVCQEFKEDSYVMVLDAYALIGDVSGLAEKIQSFFM 355
Query: 354 QEVISETHSVLKAIVHEDEEGLAQNSRFTYSDLCLQIPESKFRQCLLRTLAVLFDLMCSY 413
QEVISETHSVLK+IV ED Q SR TYSDLCLQ PESKFRQCLLRTLAVLF L+ SY
Sbjct: 356 QEVISETHSVLKSIVGEDNSAATQYSRLTYSDLCLQTPESKFRQCLLRTLAVLFQLIYSY 415
Query: 414 HEIMDFQLARK-----DSAAQASNMCNEDT--SCSPGEAQEVDSNIGVCNNSMXXXXXXX 466
HEIM F ++ + + M + T SC P + + +I C S
Sbjct: 416 HEIMSFTPEKEAEILVSPSLATTQMVDSVTGSSCDPQDGGLLPGSIPPCTISAEESDGSG 475
Query: 467 XXXXXXXXXXXXXXXXXXXVTAGSPHSDSHGPVNEAGQEENSVSSIESPWYYLRKEATTF 526
T+ S S+ ++E+ E+ VSS ESPWYYLRKE+ F
Sbjct: 476 --------------------TSSSVQLASNIAIDESRNSEDRVSSSESPWYYLRKESAAF 515
Query: 527 VSQTLQRGRKNLWHLTXXXXXXXXXXXXXXXXXIHQFLKNYEDLSVFILTGEAFCGIEAV 586
VS+TLQRGR+NLW LT IHQFLKNYEDLS+FIL GEAFCG E V
Sbjct: 516 VSETLQRGRRNLWQLTTSRVSVLLSSPGASSTSIHQFLKNYEDLSIFILAGEAFCGFEVV 575
Query: 587 EFRQKLKVVCENYFIAFHRQNVHALKMVLEKETWLKLPPDTIQIISFAGLIGDGAPLISL 646
+FR+KLK VCENYF AFHRQ++HALKMVLEKETW KL PDT+Q I+FAGL+GDGAPLI
Sbjct: 576 DFREKLKGVCENYFTAFHRQSMHALKMVLEKETWTKLSPDTVQAINFAGLVGDGAPLIIS 635
Query: 647 SSGKSMNVNAIHSDKSVSMVRTSSRKSGFSHWIKNGNPFLQKLSTSKEGHGHSQPNGSTY 706
S S + HSDK + + S +SGFS+W+K+GNPF KL+ +E +S NG
Sbjct: 636 SRSASGSSRFPHSDKPSNSIDPSGNRSGFSYWLKSGNPFSAKLTHYREDQDYSSINGE-- 693
Query: 707 GELDGGSTNNIHDDKVSPRKNGSNQLNGANSVSEDENEDLLADFIDEDSQLPSR---ISK 763
D ++IHDD V+P+ ++NG + VSEDENEDLLADFIDEDSQLP R S+
Sbjct: 694 ---DHEGNDSIHDDVVNPKIRDIKRINGGSPVSEDENEDLLADFIDEDSQLPRRSFTRSQ 750
Query: 764 PHHSRNHSHGNDEESTTQTGSSLCLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFYS 823
S +H ND+ T QTGSSLCLLRSMDKYARLMQKLE+VN EFFKGICQLF +FFY
Sbjct: 751 SRTSSSHFSTNDD-LTAQTGSSLCLLRSMDKYARLMQKLEIVNAEFFKGICQLFGVFFYF 809
Query: 824 IYETFXXXXXXXXXXXXXXXLNYRLRTALSRINQDCEEWIKPQXXXXXXXXXXF---VH- 879
+++ F N+RL++ LSRI+Q+CE+WIKP F VH
Sbjct: 810 VFQVFGQENTNSGGKGVSDSFNHRLKSCLSRISQECEQWIKPHVSSSPSSSLAFPNTVHS 869
Query: 880 -AEFTPMNPPNSNVGHSSGTSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSNSTVL 938
A+ TP +P N++ GH SG S LKERC AVDT+SLVAR+L++SKAHLQSML+ N +++
Sbjct: 870 LADVTPASPLNTS-GHLSGVSFSLKERCAAVDTVSLVARVLHKSKAHLQSMLMSRNGSLV 928
Query: 939 EDFYVHLVDAVPDLTEHVHRTTVRLLLHINGYVDRVANCKWEVKELGMEHNGYVDLLLGE 998
EDF+ LV +VPDLTEH+HRTT R+LLH+NGYVDR+AN KWE+KELGMEHNGYVDL+LGE
Sbjct: 929 EDFFGQLVGSVPDLTEHLHRTTARILLHVNGYVDRIANSKWEIKELGMEHNGYVDLMLGE 988
Query: 999 FKHYKTRLAHGGIRKEIQDLLLDYGLEIVAEALVEGLSRVKRCSDEGRALMSLDLQVLIN 1058
FKHYKTRLAHGGI +E+Q+LLL+YG+EI AE LVEGLSR+KRC+DEGR LMSLDLQVLIN
Sbjct: 989 FKHYKTRLAHGGIPQEVQNLLLEYGVEIFAEMLVEGLSRIKRCTDEGRVLMSLDLQVLIN 1048
Query: 1059 GLHHFVSLNVKPKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQVVGLINLVATMKGW 1117
GL HFV VKPKLQ+VETFIKAYYLPETEYVHWARAHPEY+K+QVVGL+NLVATMKGW
Sbjct: 1049 GLQHFVPTKVKPKLQIVETFIKAYYLPETEYVHWARAHPEYTKAQVVGLVNLVATMKGW 1107
>AT2G27900.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2451, C-terminal
(InterPro:IPR019514), Vacuolar protein sorting-associated
protein 54 (InterPro:IPR019515); Has 316 Blast hits to
252 proteins in 92 species: Archae - 0; Bacteria - 2;
Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other
Eukaryotes - 44 (source: NCBI BLink). |
chr2:11877654-11885238 FORWARD LENGTH=1124
Length = 1124
Score = 1330 bits (3442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/1139 (61%), Positives = 823/1139 (72%), Gaps = 54/1139 (4%)
Query: 1 MQPNLF-PFGSVLGNPFIFDA--DLSDXXXXXXXXXXIDSSRVFFLLPFFLLSQG-GAMD 56
MQPNLF PFGSVLGNPF+F+ DL++ +SSRVFFLLPF LLSQG G MD
Sbjct: 1 MQPNLFFPFGSVLGNPFLFNGGGDLNELGSGAA----FESSRVFFLLPF-LLSQGTGVMD 55
Query: 57 LSKVGEKILSSVRSARSLGLLPPAS--DRPEVPXXXXXXXXXXXXXXGLPPHQRYXXXXX 114
LSKVGEK LSSV+SA SLGLLP S DRPE+P GLP QR
Sbjct: 56 LSKVGEKFLSSVKSATSLGLLPSPSISDRPEIPARAAAAAAVARALAGLPSDQRLSISST 115
Query: 115 XXXXXXIYGSRP-GQVVXXXXXXXXXXDFDPIKHVLEHIPAEENELSYFEKQAALRLAQL 173
IYG+RP Q V DFDP++H+LE++P +E+EL+YFEKQA LRL QL
Sbjct: 116 ATELNSIYGNRPLPQQVEELEEGFYEEDFDPVRHILENVPDDESELAYFEKQATLRLVQL 175
Query: 174 DKVAEHLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVN 233
DKVAE LS HVMEHHEVMVKGMNLVRELEKDL+IANVIC NGRR+LTSSMNE SRDLIV+
Sbjct: 176 DKVAETLSHHVMEHHEVMVKGMNLVRELEKDLKIANVICKNGRRNLTSSMNEASRDLIVH 235
Query: 234 SYSKKKQALMDMLPVLTELQRSLDMQSMLESLVEEGNYWKAFQVLSEYLQLLDSLSELSA 293
++SKKKQAL+DMLP+LT+L+ + MQS LE LVE+GNY KAFQVLSEYLQLLDSLSE SA
Sbjct: 236 THSKKKQALLDMLPILTDLRHARVMQSNLEDLVEDGNYCKAFQVLSEYLQLLDSLSEFSA 295
Query: 294 IQEMSRGVEVWLGRTLQKLDALLLEVCQEFKEDGYITVIDAYALIGDTTGLAEKIQSFFM 353
QEM+RGVEVWLGRTL KLD+LLL VCQEFKED Y+ V+DAYALIGD +GLAEKIQSFFM
Sbjct: 296 AQEMTRGVEVWLGRTLHKLDSLLLGVCQEFKEDSYVMVLDAYALIGDVSGLAEKIQSFFM 355
Query: 354 QEVISETHSVLKAIVHEDEEGLAQNSRFTYSDLCLQIPESKFRQCLLRTLAVLFDLMCSY 413
QEVISETHSVLK+IV ED Q SR TYSDLCLQ PESKFRQCLLRTLAVLF L+ SY
Sbjct: 356 QEVISETHSVLKSIVGEDNSAATQYSRLTYSDLCLQTPESKFRQCLLRTLAVLFQLIYSY 415
Query: 414 HEIMDFQLARK-----DSAAQASNMCNEDT--SCSPGEAQEVDSNIGVCNNSMXXXXXXX 466
HEIM F ++ + + M + T SC P + + +I C S
Sbjct: 416 HEIMSFTPEKEAEILVSPSLATTQMVDSVTGSSCDPQDGGLLPGSIPPCTISAEESDGSG 475
Query: 467 XXXXXXXXXXXXXXXXXXXVTAGSPHSDSHGPVNEAGQEENSVSSIESPWYYLRKEATTF 526
T+ S S+ ++E+ E+ VSS ESPWYYLRKE+ F
Sbjct: 476 --------------------TSSSVQLASNIAIDESRNSEDRVSSSESPWYYLRKESAAF 515
Query: 527 VSQTLQRGRKNLWHLTXXXXXXXXXXXXXXXXXIHQFLKNYEDLSVFILTGEAFCGIEAV 586
VS+TLQRGR+NLW LT IHQFLKNYEDLS+FIL GEAFCG E V
Sbjct: 516 VSETLQRGRRNLWQLTTSRVSVLLSSPGASSTSIHQFLKNYEDLSIFILAGEAFCGFEVV 575
Query: 587 EFRQKLKVVCENYFIAFHRQNVHALKMVLEKETWLKLPPDTIQIISFAGLIGDGAPLISL 646
+FR+KLK VCENYF AFHRQ++HALKMVLEKETW KL PDT+Q I+FAGL+GDGAPLI
Sbjct: 576 DFREKLKGVCENYFTAFHRQSMHALKMVLEKETWTKLSPDTVQAINFAGLVGDGAPLIIS 635
Query: 647 SSGKSMNVNAIHSDKSVSMVRTSSRKSGFSHWIKNGNPFLQKLSTSKEGHGHSQPNGSTY 706
S S + HSDK + + S +SGFS+W+K+GNPF KL+ +E +S NG
Sbjct: 636 SRSASGSSRFPHSDKPSNSIDPSGNRSGFSYWLKSGNPFSAKLTHYREDQDYSSINGE-- 693
Query: 707 GELDGGSTNNIHDDKVSPRKNGSNQLNGANSVSEDENEDLLADFIDEDSQLPSR---ISK 763
D ++IHDD V+P+ ++NG + VSEDENEDLLADFIDEDSQLP R S+
Sbjct: 694 ---DHEGNDSIHDDVVNPKIRDIKRINGGSPVSEDENEDLLADFIDEDSQLPRRSFTRSQ 750
Query: 764 PHHSRNHSHGNDEESTTQTGSSLCLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFYS 823
S +H ND+ T QTGSSLCLLRSMDKYARLMQKLE+VN EFFKGICQLF +FFY
Sbjct: 751 SRTSSSHFSTNDD-LTAQTGSSLCLLRSMDKYARLMQKLEIVNAEFFKGICQLFGVFFYF 809
Query: 824 IYETFXXXXXXXXXXXXXXXLNYRLRTALSRINQDCEEWIKPQXXXXXXXXXXF---VH- 879
+++ F N+RL++ LSRI+Q+CE+WIKP F VH
Sbjct: 810 VFQVFGQENTNSGGKGVSDSFNHRLKSCLSRISQECEQWIKPHVSSSPSSSLAFPNTVHS 869
Query: 880 -AEFTPMNPPNSNVGHSSGTSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSNSTVL 938
A+ TP +P N++ GH SG S LKERC AVDT+SLVAR+L++SKAHLQSML+ N +++
Sbjct: 870 LADVTPASPLNTS-GHLSGVSFSLKERCAAVDTVSLVARVLHKSKAHLQSMLMSRNGSLV 928
Query: 939 EDFYVHLVDAVPDLTEHVHRTTVRLLLHINGYVDRVANCKWEVKELGMEHNGYVDLLLGE 998
EDF+ LV +VPDLTEH+HRTT R+LLH+NGYVDR+AN KWE+KELGMEHNGYVDL+LGE
Sbjct: 929 EDFFGQLVGSVPDLTEHLHRTTARILLHVNGYVDRIANSKWEIKELGMEHNGYVDLMLGE 988
Query: 999 FKHYKTRLAHGGIRKEIQDLLLDYGLEIVAEALVEGLSRVKRCSDEGRALMSLDLQVLIN 1058
FKHYKTRLAHGGI +E+Q+LLL+YG+EI AE LVEGLSR+KRC+DEGR LMSLDLQVLIN
Sbjct: 989 FKHYKTRLAHGGIPQEVQNLLLEYGVEIFAEMLVEGLSRIKRCTDEGRVLMSLDLQVLIN 1048
Query: 1059 GLHHFVSLNVKPKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQVVGLINLVATMKGW 1117
GL HFV VKPKLQ+VETFIKAYYLPETEYVHWARAHPEY+K+QVVGL+NLVATMKGW
Sbjct: 1049 GLQHFVPTKVKPKLQIVETFIKAYYLPETEYVHWARAHPEYTKAQVVGLVNLVATMKGW 1107